Query 017457
Match_columns 371
No_of_seqs 140 out of 1520
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 08:44:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017457.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017457hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 3.1E-64 6.6E-69 444.5 32.3 359 1-367 7-366 (366)
2 KOG0022 Alcohol dehydrogenase, 100.0 3.6E-63 7.8E-68 430.6 33.1 363 1-367 12-375 (375)
3 COG1064 AdhP Zn-dependent alco 100.0 3.1E-63 6.6E-68 448.1 33.0 327 2-368 9-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 4.2E-57 9.2E-62 395.7 29.0 338 2-369 9-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 9.8E-56 2.1E-60 386.1 29.2 330 8-369 23-356 (360)
6 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.4E-52 5.1E-57 396.1 37.0 361 3-367 8-368 (368)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 7.1E-52 1.5E-56 393.5 38.7 351 6-364 18-369 (371)
8 cd08300 alcohol_DH_class_III c 100.0 1.2E-51 2.5E-56 391.6 37.3 360 3-366 9-368 (368)
9 PLN02740 Alcohol dehydrogenase 100.0 1.6E-51 3.5E-56 392.1 36.2 359 4-367 18-381 (381)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 7.6E-51 1.6E-55 384.7 36.1 346 4-366 9-357 (358)
11 cd08239 THR_DH_like L-threonin 100.0 1.5E-50 3.2E-55 380.1 35.4 333 3-367 6-339 (339)
12 cd08301 alcohol_DH_plants Plan 100.0 2.2E-50 4.8E-55 383.1 36.6 358 3-365 9-368 (369)
13 PLN02827 Alcohol dehydrogenase 100.0 8.8E-50 1.9E-54 379.3 35.9 357 4-368 20-377 (378)
14 cd08277 liver_alcohol_DH_like 100.0 1.8E-49 3.9E-54 376.2 37.2 356 3-365 9-364 (365)
15 PRK09880 L-idonate 5-dehydroge 100.0 1.5E-49 3.3E-54 373.6 33.5 332 2-367 9-343 (343)
16 COG0604 Qor NADPH:quinone redu 100.0 1.6E-48 3.5E-53 360.8 30.5 305 8-367 14-326 (326)
17 COG1063 Tdh Threonine dehydrog 100.0 6E-48 1.3E-52 361.5 32.5 335 5-367 9-350 (350)
18 TIGR03201 dearomat_had 6-hydro 100.0 1.8E-47 3.9E-52 360.4 35.2 330 3-366 5-348 (349)
19 PLN02586 probable cinnamyl alc 100.0 1.9E-47 4.1E-52 361.2 34.6 329 4-370 20-356 (360)
20 TIGR02819 fdhA_non_GSH formald 100.0 9.7E-48 2.1E-52 366.1 32.3 339 4-368 9-391 (393)
21 PLN02178 cinnamyl-alcohol dehy 100.0 3.3E-47 7.2E-52 360.7 34.2 329 4-370 14-351 (375)
22 PRK10309 galactitol-1-phosphat 100.0 2E-46 4.4E-51 353.2 35.0 332 4-367 7-346 (347)
23 cd08299 alcohol_DH_class_I_II_ 100.0 7.5E-46 1.6E-50 352.1 38.2 359 3-367 14-373 (373)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.8E-46 3.9E-51 350.4 33.1 313 7-365 13-328 (329)
25 cd08231 MDR_TM0436_like Hypoth 100.0 6.1E-46 1.3E-50 351.8 35.4 342 4-367 8-361 (361)
26 cd08230 glucose_DH Glucose deh 100.0 7.7E-46 1.7E-50 350.2 33.3 326 7-367 11-355 (355)
27 cd05279 Zn_ADH1 Liver alcohol 100.0 4.3E-45 9.4E-50 346.2 36.9 355 3-365 7-364 (365)
28 KOG1197 Predicted quinone oxid 100.0 2.7E-46 5.8E-51 315.8 23.7 306 4-369 18-332 (336)
29 PLN02514 cinnamyl-alcohol dehy 100.0 6E-45 1.3E-49 344.0 34.5 333 3-369 16-352 (357)
30 cd08233 butanediol_DH_like (2R 100.0 1.1E-44 2.4E-49 341.9 34.8 329 4-365 7-350 (351)
31 cd08278 benzyl_alcohol_DH Benz 100.0 6.1E-43 1.3E-47 331.5 36.9 352 6-366 12-365 (365)
32 cd08237 ribitol-5-phosphate_DH 100.0 4E-44 8.7E-49 336.3 28.0 317 3-368 8-340 (341)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 6.9E-43 1.5E-47 329.7 34.5 335 5-367 8-351 (351)
34 PRK10083 putative oxidoreducta 100.0 3.1E-42 6.7E-47 323.7 34.1 328 4-369 7-339 (339)
35 cd08296 CAD_like Cinnamyl alco 100.0 3.4E-42 7.5E-47 322.6 34.2 323 4-366 8-333 (333)
36 cd08238 sorbose_phosphate_red 100.0 2.4E-42 5.2E-47 332.0 33.6 326 5-369 10-370 (410)
37 cd08279 Zn_ADH_class_III Class 100.0 2E-41 4.3E-46 321.1 35.7 353 4-365 8-362 (363)
38 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1.7E-41 3.7E-46 320.1 33.7 327 7-365 10-350 (350)
39 cd05278 FDH_like Formaldehyde 100.0 1.7E-41 3.6E-46 319.7 33.4 333 5-366 8-346 (347)
40 cd05284 arabinose_DH_like D-ar 100.0 4.4E-41 9.5E-46 316.0 34.8 325 5-366 9-339 (340)
41 cd08283 FDH_like_1 Glutathione 100.0 4.9E-41 1.1E-45 320.6 35.5 345 4-366 7-385 (386)
42 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.5E-41 3.2E-46 314.5 28.2 298 3-366 7-308 (308)
43 cd08286 FDH_like_ADH2 formalde 100.0 1.1E-40 2.5E-45 313.8 34.2 329 6-367 9-345 (345)
44 cd08240 6_hydroxyhexanoate_dh_ 100.0 1.7E-40 3.7E-45 313.3 33.7 331 4-366 8-349 (350)
45 cd08246 crotonyl_coA_red croto 100.0 2.5E-40 5.4E-45 316.8 34.4 328 8-365 29-391 (393)
46 cd08260 Zn_ADH6 Alcohol dehydr 100.0 4.3E-40 9.4E-45 309.9 35.0 331 4-365 8-343 (345)
47 cd08265 Zn_ADH3 Alcohol dehydr 100.0 3.2E-40 6.9E-45 314.9 33.4 330 7-365 37-383 (384)
48 PRK05396 tdh L-threonine 3-deh 100.0 5.5E-40 1.2E-44 308.7 34.4 331 4-368 8-341 (341)
49 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.2E-39 2.7E-44 309.3 35.3 351 5-366 9-367 (367)
50 cd08284 FDH_like_2 Glutathione 100.0 8.4E-40 1.8E-44 307.8 33.7 333 3-366 6-343 (344)
51 cd05283 CAD1 Cinnamyl alcohol 100.0 5.9E-40 1.3E-44 308.0 32.3 330 2-366 5-337 (337)
52 cd08287 FDH_like_ADH3 formalde 100.0 1.4E-39 2.9E-44 306.5 34.2 329 3-366 6-344 (345)
53 TIGR03366 HpnZ_proposed putati 100.0 1.3E-40 2.9E-45 304.2 25.9 269 55-348 1-280 (280)
54 cd05285 sorbitol_DH Sorbitol d 100.0 2.5E-39 5.4E-44 304.5 34.7 329 4-365 5-341 (343)
55 cd08291 ETR_like_1 2-enoyl thi 100.0 4.4E-40 9.6E-45 307.2 29.0 298 8-365 17-323 (324)
56 cd08232 idonate-5-DH L-idonate 100.0 2.9E-39 6.2E-44 303.6 34.1 332 2-367 2-339 (339)
57 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.2E-39 9.1E-44 302.2 35.2 324 7-367 10-337 (337)
58 cd08235 iditol_2_DH_like L-idi 100.0 4.2E-39 9.1E-44 302.9 34.3 326 7-365 10-342 (343)
59 PRK13771 putative alcohol dehy 100.0 2.5E-39 5.5E-44 303.3 32.4 323 4-367 8-333 (334)
60 TIGR00692 tdh L-threonine 3-de 100.0 7E-39 1.5E-43 301.1 34.5 335 2-367 4-340 (340)
61 cd08282 PFDH_like Pseudomonas 100.0 4.8E-39 1.1E-43 305.9 33.8 339 4-366 7-374 (375)
62 PLN02702 L-idonate 5-dehydroge 100.0 9.8E-39 2.1E-43 302.8 35.6 330 6-366 26-363 (364)
63 TIGR01751 crot-CoA-red crotony 100.0 6.6E-39 1.4E-43 307.3 34.2 332 7-368 23-388 (398)
64 PLN03154 putative allyl alcoho 100.0 4.7E-39 1E-43 302.6 30.7 301 8-369 26-347 (348)
65 cd08297 CAD3 Cinnamyl alcohol 100.0 2.7E-38 5.9E-43 297.1 35.9 325 7-367 12-341 (341)
66 cd08262 Zn_ADH8 Alcohol dehydr 100.0 1.1E-38 2.5E-43 299.7 32.9 316 8-366 10-341 (341)
67 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.4E-38 5.2E-43 296.9 34.4 322 9-367 14-338 (338)
68 cd05281 TDH Threonine dehydrog 100.0 1.9E-38 4.1E-43 298.3 33.1 330 5-366 9-340 (341)
69 PRK09422 ethanol-active dehydr 100.0 3.4E-38 7.3E-43 296.1 34.8 324 6-368 10-337 (338)
70 KOG0025 Zn2+-binding dehydroge 100.0 4.5E-39 9.8E-44 276.8 25.9 306 4-367 30-352 (354)
71 cd08295 double_bond_reductase_ 100.0 1.4E-38 3.1E-43 298.7 30.8 303 5-367 17-338 (338)
72 cd08242 MDR_like Medium chain 100.0 2.4E-38 5.3E-43 294.8 32.0 307 6-366 9-318 (319)
73 cd08236 sugar_DH NAD(P)-depend 100.0 4.3E-38 9.3E-43 296.1 33.6 327 7-365 10-343 (343)
74 cd08293 PTGR2 Prostaglandin re 100.0 2.7E-38 5.9E-43 297.7 31.4 300 8-367 22-345 (345)
75 TIGR02825 B4_12hDH leukotriene 100.0 2.5E-38 5.4E-43 295.5 30.2 293 6-365 16-324 (325)
76 cd08234 threonine_DH_like L-th 100.0 1.2E-37 2.7E-42 291.8 34.2 321 7-365 10-333 (334)
77 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.2E-37 2.5E-42 292.2 33.5 325 7-366 13-341 (342)
78 cd08292 ETR_like_2 2-enoyl thi 100.0 5E-38 1.1E-42 293.1 29.3 298 8-365 15-323 (324)
79 cd08264 Zn_ADH_like2 Alcohol d 100.0 7.1E-38 1.5E-42 292.4 30.2 308 7-361 12-321 (325)
80 cd08259 Zn_ADH5 Alcohol dehydr 100.0 2.6E-37 5.6E-42 289.1 33.8 320 5-365 9-331 (332)
81 cd08298 CAD2 Cinnamyl alcohol 100.0 1.8E-37 4E-42 290.1 32.2 311 8-364 16-328 (329)
82 cd08245 CAD Cinnamyl alcohol d 100.0 7.4E-37 1.6E-41 286.1 32.7 321 4-365 7-330 (330)
83 cd08274 MDR9 Medium chain dehy 100.0 8.8E-37 1.9E-41 287.9 31.1 313 8-366 14-349 (350)
84 cd08294 leukotriene_B4_DH_like 100.0 7.4E-37 1.6E-41 285.9 29.8 293 7-367 19-329 (329)
85 cd08258 Zn_ADH4 Alcohol dehydr 100.0 3.2E-36 6.9E-41 278.8 31.5 290 7-331 12-306 (306)
86 TIGR02817 adh_fam_1 zinc-bindi 100.0 4.7E-36 1E-40 281.3 30.0 300 6-366 14-334 (336)
87 cd08269 Zn_ADH9 Alcohol dehydr 100.0 1.7E-35 3.7E-40 274.5 32.7 302 6-365 4-311 (312)
88 cd05282 ETR_like 2-enoyl thioe 100.0 1E-35 2.2E-40 277.4 29.9 299 8-365 13-322 (323)
89 cd08276 MDR7 Medium chain dehy 100.0 8.3E-35 1.8E-39 272.5 33.6 320 7-366 13-335 (336)
90 cd08244 MDR_enoyl_red Possible 100.0 6E-35 1.3E-39 272.2 31.9 302 8-366 14-323 (324)
91 cd08290 ETR 2-enoyl thioester 100.0 2.4E-35 5.2E-40 277.1 28.7 305 9-367 16-341 (341)
92 PRK10754 quinone oxidoreductas 100.0 2.7E-35 5.9E-40 275.1 28.0 303 7-366 14-326 (327)
93 cd08250 Mgc45594_like Mgc45594 100.0 5.9E-35 1.3E-39 273.1 29.4 301 6-365 15-328 (329)
94 KOG1198 Zinc-binding oxidoredu 100.0 1.5E-35 3.2E-40 274.4 23.6 302 9-368 20-346 (347)
95 PTZ00354 alcohol dehydrogenase 100.0 1.6E-34 3.4E-39 270.5 30.4 303 8-369 15-330 (334)
96 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.3E-34 4.9E-39 268.5 30.7 302 8-367 14-325 (325)
97 TIGR02823 oxido_YhdH putative 100.0 4E-34 8.7E-39 266.8 31.7 301 8-366 13-322 (323)
98 COG2130 Putative NADP-dependen 100.0 2.4E-34 5.1E-39 250.3 27.0 299 8-369 26-340 (340)
99 cd08289 MDR_yhfp_like Yhfp put 100.0 6E-34 1.3E-38 265.9 30.8 304 8-367 14-326 (326)
100 cd08243 quinone_oxidoreductase 100.0 4.7E-34 1E-38 265.5 29.8 300 8-365 14-319 (320)
101 cd08249 enoyl_reductase_like e 100.0 3.9E-34 8.4E-39 268.7 28.8 302 7-367 12-339 (339)
102 cd08270 MDR4 Medium chain dehy 100.0 7E-34 1.5E-38 262.9 28.2 287 8-367 13-305 (305)
103 cd05188 MDR Medium chain reduc 100.0 2.3E-33 4.9E-38 254.5 27.3 269 23-327 1-270 (271)
104 cd08252 AL_MDR Arginate lyase 100.0 5.5E-33 1.2E-37 260.5 28.9 299 9-365 18-335 (336)
105 cd05286 QOR2 Quinone oxidoredu 100.0 1.7E-32 3.7E-37 254.3 30.9 298 8-366 13-319 (320)
106 cd08253 zeta_crystallin Zeta-c 100.0 2.9E-32 6.4E-37 253.4 31.3 304 8-366 14-324 (325)
107 cd05288 PGDH Prostaglandin deh 100.0 1.7E-32 3.6E-37 256.5 28.0 297 6-364 17-328 (329)
108 cd08251 polyketide_synthase po 100.0 3.2E-32 7E-37 250.9 28.7 292 16-364 2-302 (303)
109 cd05276 p53_inducible_oxidored 100.0 4.1E-32 8.9E-37 252.1 29.0 298 8-364 14-322 (323)
110 cd08248 RTN4I1 Human Reticulon 100.0 1.1E-32 2.4E-37 259.9 25.3 300 9-365 16-349 (350)
111 cd08288 MDR_yhdh Yhdh putative 100.0 1.1E-31 2.4E-36 250.3 31.0 302 8-367 14-324 (324)
112 cd08272 MDR6 Medium chain dehy 100.0 8.6E-32 1.9E-36 250.7 29.1 300 9-367 15-326 (326)
113 cd08247 AST1_like AST1 is a cy 100.0 1.1E-31 2.4E-36 253.4 30.0 310 3-366 7-351 (352)
114 cd08273 MDR8 Medium chain dehy 100.0 6.5E-32 1.4E-36 252.6 27.1 297 7-365 13-330 (331)
115 cd08271 MDR5 Medium chain dehy 100.0 1.4E-31 3E-36 249.4 28.5 298 8-366 14-324 (325)
116 cd08268 MDR2 Medium chain dehy 100.0 4.5E-31 9.7E-36 245.9 31.2 305 8-366 14-327 (328)
117 TIGR02824 quinone_pig3 putativ 100.0 4.6E-31 1E-35 245.5 30.1 299 9-366 15-324 (325)
118 cd08267 MDR1 Medium chain dehy 100.0 1.2E-30 2.7E-35 242.4 26.5 296 10-364 15-318 (319)
119 cd08275 MDR3 Medium chain dehy 100.0 4.8E-30 1E-34 240.2 30.5 301 8-367 13-337 (337)
120 cd05195 enoyl_red enoyl reduct 100.0 1.4E-30 3.1E-35 238.0 25.8 281 22-364 1-292 (293)
121 cd05289 MDR_like_2 alcohol deh 100.0 1.8E-30 3.9E-35 239.8 26.4 290 9-364 15-308 (309)
122 cd08241 QOR1 Quinone oxidoredu 100.0 6.5E-30 1.4E-34 237.5 29.5 298 8-365 14-322 (323)
123 smart00829 PKS_ER Enoylreducta 100.0 5.4E-30 1.2E-34 233.9 25.6 276 26-364 2-287 (288)
124 KOG1202 Animal-type fatty acid 100.0 1.3E-28 2.9E-33 243.0 18.3 295 8-367 1428-1741(2376)
125 cd08255 2-desacetyl-2-hydroxye 100.0 5.5E-27 1.2E-31 213.9 24.2 245 51-365 19-277 (277)
126 KOG1196 Predicted NAD-dependen 99.9 4.3E-25 9.4E-30 191.9 25.1 293 13-368 28-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.9 1.3E-23 2.8E-28 163.9 7.3 108 21-152 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 4.4E-17 9.5E-22 131.3 15.0 128 194-330 1-130 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.8E-12 3.9E-17 122.5 15.8 175 173-369 190-378 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 7E-11 1.5E-15 114.5 15.1 155 181-340 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 1.7E-11 3.8E-16 98.1 5.4 119 227-365 1-127 (127)
132 TIGR00561 pntA NAD(P) transhyd 98.6 6.4E-07 1.4E-11 87.0 11.8 108 182-291 162-289 (511)
133 PRK11873 arsM arsenite S-adeno 98.6 8.8E-07 1.9E-11 80.5 12.2 161 178-355 72-246 (272)
134 TIGR01035 hemA glutamyl-tRNA r 98.5 1.3E-08 2.9E-13 97.8 -2.1 159 55-266 89-252 (417)
135 PRK08306 dipicolinate synthase 98.3 1.9E-05 4E-10 72.5 13.8 96 183-291 151-246 (296)
136 PRK05476 S-adenosyl-L-homocyst 98.2 1.8E-05 4E-10 75.5 12.6 101 172-288 199-301 (425)
137 TIGR00936 ahcY adenosylhomocys 98.1 3.5E-05 7.7E-10 73.1 12.7 92 181-288 192-284 (406)
138 PRK00045 hemA glutamyl-tRNA re 98.1 2E-07 4.3E-12 90.0 -4.5 160 55-266 91-254 (423)
139 PRK00517 prmA ribosomal protei 98.0 0.00012 2.5E-09 65.7 13.3 132 137-287 78-214 (250)
140 PLN02494 adenosylhomocysteinas 98.0 8E-05 1.7E-09 71.4 11.8 98 174-287 243-342 (477)
141 cd05213 NAD_bind_Glutamyl_tRNA 98.0 2.4E-05 5.2E-10 72.4 8.1 109 147-267 139-251 (311)
142 TIGR00518 alaDH alanine dehydr 97.8 0.00023 5E-09 67.4 12.0 100 183-291 166-272 (370)
143 TIGR02853 spore_dpaA dipicolin 97.8 0.00036 7.9E-09 63.7 12.7 94 183-289 150-243 (287)
144 PTZ00075 Adenosylhomocysteinas 97.7 0.00036 7.7E-09 67.2 11.9 92 181-288 251-343 (476)
145 PF01488 Shikimate_DH: Shikima 97.7 0.00021 4.5E-09 57.6 8.2 97 181-287 9-110 (135)
146 PRK08324 short chain dehydroge 97.7 0.00042 9.1E-09 71.3 11.9 137 137-288 386-559 (681)
147 COG2518 Pcm Protein-L-isoaspar 97.5 0.00049 1.1E-08 58.8 7.8 118 156-286 47-169 (209)
148 PRK12771 putative glutamate sy 97.5 0.00022 4.7E-09 71.8 6.4 81 180-266 133-234 (564)
149 TIGR00406 prmA ribosomal prote 97.4 0.0015 3.2E-08 59.9 11.1 96 181-287 157-260 (288)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.4 0.0028 6E-08 56.0 12.3 104 183-288 4-137 (238)
151 COG4221 Short-chain alcohol de 97.3 0.0014 3E-08 57.2 9.0 79 183-264 5-91 (246)
152 PF11017 DUF2855: Protein of u 97.3 0.0063 1.4E-07 55.6 13.6 110 167-287 117-232 (314)
153 PRK00377 cbiT cobalt-precorrin 97.3 0.0042 9E-08 53.6 11.5 102 177-285 34-144 (198)
154 COG1748 LYS9 Saccharopine dehy 97.2 0.005 1.1E-07 58.0 12.1 97 185-289 2-102 (389)
155 COG2242 CobL Precorrin-6B meth 97.2 0.0048 1E-07 51.7 10.6 103 177-287 28-136 (187)
156 COG3967 DltE Short-chain dehyd 97.2 0.0027 5.9E-08 53.7 8.5 77 183-264 4-88 (245)
157 PRK11705 cyclopropane fatty ac 97.1 0.0038 8.3E-08 59.5 10.4 109 167-286 151-267 (383)
158 COG0300 DltE Short-chain dehyd 97.1 0.0044 9.5E-08 55.4 9.8 82 181-264 3-94 (265)
159 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0055 1.2E-07 51.9 9.7 91 181-287 33-128 (178)
160 PRK05993 short chain dehydroge 97.0 0.0055 1.2E-07 55.7 9.8 78 183-263 3-85 (277)
161 PRK13943 protein-L-isoaspartat 97.0 0.0081 1.7E-07 55.7 10.6 102 176-285 73-179 (322)
162 PRK07326 short chain dehydroge 96.9 0.016 3.5E-07 51.1 12.3 81 183-264 5-92 (237)
163 PRK12742 oxidoreductase; Provi 96.9 0.026 5.6E-07 49.7 13.6 100 183-288 5-133 (237)
164 PRK05693 short chain dehydroge 96.9 0.0051 1.1E-07 55.7 9.2 76 185-263 2-81 (274)
165 PRK08177 short chain dehydroge 96.9 0.0055 1.2E-07 53.8 8.9 77 185-264 2-81 (225)
166 PLN03209 translocon at the inn 96.9 0.021 4.6E-07 56.6 13.6 105 178-288 74-209 (576)
167 KOG1209 1-Acyl dihydroxyaceton 96.9 0.01 2.2E-07 50.6 9.5 81 183-264 6-91 (289)
168 PRK06182 short chain dehydroge 96.9 0.0063 1.4E-07 55.1 9.2 79 183-264 2-84 (273)
169 PF13460 NAD_binding_10: NADH( 96.9 0.024 5.1E-07 47.9 12.2 91 187-287 1-98 (183)
170 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0042 9.1E-08 52.0 7.3 105 183-290 19-143 (168)
171 PRK08265 short chain dehydroge 96.8 0.018 3.9E-07 51.8 12.0 79 183-264 5-90 (261)
172 TIGR00438 rrmJ cell division p 96.8 0.017 3.7E-07 49.3 11.1 101 178-286 27-146 (188)
173 PF13241 NAD_binding_7: Putati 96.8 0.0045 9.7E-08 47.3 6.6 91 183-291 6-96 (103)
174 PRK03369 murD UDP-N-acetylmura 96.8 0.0076 1.6E-07 59.5 9.7 75 180-266 8-82 (488)
175 COG2264 PrmA Ribosomal protein 96.8 0.017 3.7E-07 52.5 10.9 128 147-288 130-265 (300)
176 PRK06949 short chain dehydroge 96.8 0.0091 2E-07 53.4 9.4 82 182-264 7-96 (258)
177 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.014 3.1E-07 48.7 9.7 96 162-288 22-118 (168)
178 KOG1205 Predicted dehydrogenas 96.7 0.021 4.7E-07 51.5 11.3 106 182-290 10-153 (282)
179 PRK04148 hypothetical protein; 96.7 0.01 2.3E-07 47.2 8.2 95 181-285 14-108 (134)
180 PRK06057 short chain dehydroge 96.7 0.0092 2E-07 53.4 9.0 79 183-264 6-89 (255)
181 PRK07109 short chain dehydroge 96.7 0.024 5.3E-07 53.1 12.2 79 183-264 7-95 (334)
182 PRK07806 short chain dehydroge 96.7 0.028 6E-07 50.0 11.9 101 183-287 5-135 (248)
183 TIGR02469 CbiT precorrin-6Y C5 96.7 0.024 5.2E-07 44.3 10.3 101 177-286 13-122 (124)
184 PRK12828 short chain dehydroge 96.7 0.028 6.1E-07 49.4 11.9 79 183-264 6-92 (239)
185 PRK08017 oxidoreductase; Provi 96.7 0.0066 1.4E-07 54.2 7.9 77 185-264 3-84 (256)
186 PRK12939 short chain dehydroge 96.7 0.033 7.1E-07 49.4 12.3 80 182-264 5-94 (250)
187 PRK07060 short chain dehydroge 96.7 0.016 3.6E-07 51.2 10.3 77 183-264 8-87 (245)
188 PF12847 Methyltransf_18: Meth 96.7 0.0072 1.6E-07 46.5 7.0 92 183-284 1-109 (112)
189 PRK13940 glutamyl-tRNA reducta 96.7 0.013 2.8E-07 56.3 10.0 96 181-287 178-274 (414)
190 PF00670 AdoHcyase_NAD: S-aden 96.7 0.033 7.1E-07 45.9 10.9 91 181-287 20-111 (162)
191 PRK12829 short chain dehydroge 96.6 0.011 2.3E-07 53.2 8.9 85 180-265 7-97 (264)
192 PRK06139 short chain dehydroge 96.6 0.0099 2.1E-07 55.6 8.8 80 182-264 5-94 (330)
193 PRK14967 putative methyltransf 96.6 0.1 2.2E-06 45.8 14.5 97 178-286 31-159 (223)
194 PRK12549 shikimate 5-dehydroge 96.6 0.03 6.6E-07 51.1 11.3 95 182-287 125-228 (284)
195 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.014 3.1E-07 52.4 9.2 80 183-263 5-89 (263)
196 COG0686 Ald Alanine dehydrogen 96.6 0.011 2.3E-07 53.4 7.9 97 185-290 169-272 (371)
197 PRK07825 short chain dehydroge 96.5 0.016 3.4E-07 52.5 9.3 78 184-264 5-88 (273)
198 PRK06718 precorrin-2 dehydroge 96.5 0.012 2.5E-07 50.9 8.0 92 183-287 9-101 (202)
199 TIGR01470 cysG_Nterm siroheme 96.5 0.023 5E-07 49.2 9.6 93 183-287 8-101 (205)
200 PRK05867 short chain dehydroge 96.5 0.018 3.8E-07 51.5 9.2 79 183-264 8-96 (253)
201 PRK13944 protein-L-isoaspartat 96.5 0.022 4.7E-07 49.4 9.4 100 176-285 65-172 (205)
202 PRK08628 short chain dehydroge 96.5 0.05 1.1E-06 48.6 12.2 81 183-264 6-93 (258)
203 TIGR03325 BphB_TodD cis-2,3-di 96.5 0.017 3.6E-07 52.0 9.0 78 183-263 4-88 (262)
204 PRK05866 short chain dehydroge 96.5 0.019 4E-07 52.8 9.4 81 183-264 39-127 (293)
205 PRK06719 precorrin-2 dehydroge 96.5 0.032 7E-07 46.1 9.9 90 182-286 11-100 (157)
206 PRK07814 short chain dehydroge 96.5 0.019 4.1E-07 51.7 9.3 78 183-263 9-96 (263)
207 PRK07677 short chain dehydroge 96.5 0.017 3.7E-07 51.6 8.9 80 184-264 1-88 (252)
208 COG0169 AroE Shikimate 5-dehyd 96.4 0.013 2.8E-07 53.1 7.9 46 181-226 123-168 (283)
209 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.042 9.2E-07 53.7 12.2 78 182-263 208-293 (450)
210 TIGR01809 Shik-DH-AROM shikima 96.4 0.015 3.2E-07 53.1 8.4 76 183-265 124-201 (282)
211 PRK13942 protein-L-isoaspartat 96.4 0.012 2.5E-07 51.4 7.4 101 175-285 68-175 (212)
212 PRK05872 short chain dehydroge 96.4 0.02 4.4E-07 52.6 9.3 79 183-264 8-95 (296)
213 PRK09186 flagellin modificatio 96.4 0.053 1.1E-06 48.4 11.8 78 183-263 3-92 (256)
214 PRK07231 fabG 3-ketoacyl-(acyl 96.4 0.022 4.8E-07 50.6 9.2 81 183-264 4-91 (251)
215 PRK06505 enoyl-(acyl carrier p 96.4 0.022 4.8E-07 51.6 9.2 80 183-263 6-94 (271)
216 PRK06841 short chain dehydroge 96.4 0.022 4.7E-07 50.9 9.0 81 183-264 14-99 (255)
217 PRK06180 short chain dehydroge 96.4 0.022 4.7E-07 51.7 9.1 79 183-264 3-88 (277)
218 PRK00107 gidB 16S rRNA methylt 96.4 0.039 8.5E-07 47.0 10.0 96 181-286 43-145 (187)
219 PRK07831 short chain dehydroge 96.3 0.027 5.8E-07 50.6 9.6 81 181-264 14-107 (262)
220 PRK06196 oxidoreductase; Provi 96.3 0.025 5.4E-07 52.5 9.6 78 183-263 25-108 (315)
221 PRK06500 short chain dehydroge 96.3 0.027 5.8E-07 50.0 9.4 81 183-264 5-90 (249)
222 PRK14175 bifunctional 5,10-met 96.3 0.034 7.4E-07 50.4 9.9 94 163-288 137-232 (286)
223 PRK08339 short chain dehydroge 96.3 0.031 6.6E-07 50.4 9.8 103 183-288 7-145 (263)
224 PF01135 PCMT: Protein-L-isoas 96.3 0.0094 2E-07 51.7 6.1 100 175-285 64-171 (209)
225 PRK07062 short chain dehydroge 96.3 0.024 5.2E-07 51.0 9.1 79 183-264 7-97 (265)
226 TIGR01832 kduD 2-deoxy-D-gluco 96.3 0.03 6.6E-07 49.7 9.7 81 183-264 4-90 (248)
227 cd05311 NAD_bind_2_malic_enz N 96.3 0.072 1.6E-06 46.9 11.6 92 182-286 23-128 (226)
228 PF06325 PrmA: Ribosomal prote 96.3 0.021 4.6E-07 52.1 8.5 94 181-288 159-261 (295)
229 cd01065 NAD_bind_Shikimate_DH 96.3 0.031 6.8E-07 45.8 8.9 96 182-287 17-117 (155)
230 PRK12429 3-hydroxybutyrate deh 96.3 0.062 1.3E-06 47.9 11.5 81 183-264 3-91 (258)
231 PRK08263 short chain dehydroge 96.3 0.061 1.3E-06 48.7 11.6 80 184-264 3-87 (275)
232 PRK05653 fabG 3-ketoacyl-(acyl 96.3 0.091 2E-06 46.3 12.5 79 183-264 4-92 (246)
233 PRK07478 short chain dehydroge 96.3 0.03 6.5E-07 50.0 9.4 79 183-264 5-93 (254)
234 PRK00258 aroE shikimate 5-dehy 96.2 0.029 6.3E-07 51.1 9.1 96 182-287 121-222 (278)
235 PRK06484 short chain dehydroge 96.2 0.068 1.5E-06 53.2 12.6 103 182-288 267-402 (520)
236 PRK07904 short chain dehydroge 96.2 0.037 8E-07 49.6 9.7 83 181-264 5-97 (253)
237 PRK07576 short chain dehydroge 96.2 0.034 7.4E-07 50.1 9.5 79 182-263 7-95 (264)
238 COG3288 PntA NAD/NADP transhyd 96.2 0.031 6.7E-07 50.3 8.7 131 179-311 159-308 (356)
239 PLN02366 spermidine synthase 96.2 0.071 1.5E-06 49.2 11.5 98 181-286 89-206 (308)
240 PRK14027 quinate/shikimate deh 96.2 0.051 1.1E-06 49.5 10.5 45 182-226 125-169 (283)
241 PRK07454 short chain dehydroge 96.2 0.042 9E-07 48.6 9.8 82 182-264 4-93 (241)
242 PLN02780 ketoreductase/ oxidor 96.2 0.032 7E-07 51.9 9.4 79 183-263 52-141 (320)
243 PRK12550 shikimate 5-dehydroge 96.2 0.041 8.9E-07 49.8 9.7 70 180-264 118-188 (272)
244 TIGR02356 adenyl_thiF thiazole 96.2 0.066 1.4E-06 46.3 10.6 35 183-217 20-54 (202)
245 PF02353 CMAS: Mycolic acid cy 96.2 0.0062 1.3E-07 55.2 4.3 98 175-286 54-166 (273)
246 PRK07523 gluconate 5-dehydroge 96.2 0.037 8.1E-07 49.4 9.4 79 183-264 9-97 (255)
247 PRK08618 ornithine cyclodeamin 96.2 0.12 2.6E-06 48.2 13.0 102 182-298 125-232 (325)
248 PRK06128 oxidoreductase; Provi 96.1 0.082 1.8E-06 48.6 11.8 101 183-287 54-192 (300)
249 PRK07832 short chain dehydroge 96.1 0.095 2.1E-06 47.4 12.1 77 185-264 1-88 (272)
250 PRK05875 short chain dehydroge 96.1 0.037 8.1E-07 50.0 9.5 80 183-263 6-95 (276)
251 PRK08217 fabG 3-ketoacyl-(acyl 96.1 0.04 8.6E-07 48.9 9.5 80 183-263 4-91 (253)
252 PRK06953 short chain dehydroge 96.1 0.036 7.9E-07 48.4 9.1 77 185-264 2-80 (222)
253 PRK09291 short chain dehydroge 96.1 0.04 8.6E-07 49.2 9.5 73 184-263 2-82 (257)
254 PRK07533 enoyl-(acyl carrier p 96.1 0.034 7.4E-07 49.9 9.1 80 183-263 9-97 (258)
255 PF03435 Saccharop_dh: Sacchar 96.1 0.052 1.1E-06 51.9 10.8 91 187-285 1-97 (386)
256 PRK07063 short chain dehydroge 96.1 0.037 8E-07 49.6 9.3 81 183-264 6-96 (260)
257 TIGR03206 benzo_BadH 2-hydroxy 96.1 0.04 8.7E-07 48.9 9.4 80 183-263 2-89 (250)
258 PRK05717 oxidoreductase; Valid 96.1 0.04 8.6E-07 49.3 9.3 79 183-264 9-94 (255)
259 PRK06138 short chain dehydroge 96.1 0.041 9E-07 48.9 9.4 81 183-264 4-91 (252)
260 CHL00194 ycf39 Ycf39; Provisio 96.1 0.082 1.8E-06 49.1 11.6 93 186-287 2-110 (317)
261 PRK00811 spermidine synthase; 96.1 0.046 9.9E-07 49.9 9.6 96 182-286 75-191 (283)
262 COG0373 HemA Glutamyl-tRNA red 96.1 0.14 3E-06 48.9 12.9 95 182-287 176-275 (414)
263 COG4122 Predicted O-methyltran 96.1 0.084 1.8E-06 45.9 10.6 109 176-288 52-168 (219)
264 PRK06603 enoyl-(acyl carrier p 96.0 0.041 8.9E-07 49.5 9.1 78 183-263 7-95 (260)
265 PRK07890 short chain dehydroge 96.0 0.045 9.7E-07 48.9 9.4 80 182-264 3-92 (258)
266 PRK08213 gluconate 5-dehydroge 96.0 0.048 1E-06 48.8 9.6 81 183-264 11-99 (259)
267 PRK07035 short chain dehydroge 96.0 0.046 9.9E-07 48.7 9.4 78 183-263 7-94 (252)
268 PRK09072 short chain dehydroge 96.0 0.055 1.2E-06 48.6 9.8 81 183-264 4-90 (263)
269 PRK00536 speE spermidine synth 96.0 0.03 6.4E-07 50.2 7.8 98 182-286 71-171 (262)
270 PRK07774 short chain dehydroge 96.0 0.05 1.1E-06 48.3 9.5 79 183-264 5-93 (250)
271 PRK07402 precorrin-6B methylas 96.0 0.17 3.7E-06 43.4 12.4 103 176-287 33-143 (196)
272 PRK08277 D-mannonate oxidoredu 96.0 0.048 1E-06 49.4 9.5 80 183-263 9-96 (278)
273 PRK12548 shikimate 5-dehydroge 96.0 0.068 1.5E-06 49.0 10.4 37 182-218 124-160 (289)
274 TIGR00080 pimt protein-L-isoas 96.0 0.028 6.1E-07 49.1 7.5 101 175-285 69-176 (215)
275 PRK05854 short chain dehydroge 96.0 0.048 1E-06 50.6 9.4 41 183-224 13-54 (313)
276 PRK06194 hypothetical protein; 96.0 0.047 1E-06 49.7 9.3 81 183-264 5-93 (287)
277 PRK07502 cyclohexadienyl dehyd 96.0 0.072 1.6E-06 49.3 10.6 92 184-287 6-101 (307)
278 PRK11207 tellurite resistance 96.0 0.033 7.2E-07 47.9 7.8 99 177-286 24-134 (197)
279 PRK08340 glucose-1-dehydrogena 95.9 0.05 1.1E-06 48.8 9.2 78 186-264 2-86 (259)
280 PRK08415 enoyl-(acyl carrier p 95.9 0.052 1.1E-06 49.3 9.3 102 183-288 4-145 (274)
281 PRK08690 enoyl-(acyl carrier p 95.9 0.053 1.2E-06 48.8 9.3 81 183-264 5-94 (261)
282 PRK06197 short chain dehydroge 95.9 0.054 1.2E-06 49.9 9.5 80 183-263 15-104 (306)
283 PRK08267 short chain dehydroge 95.9 0.064 1.4E-06 48.0 9.8 77 185-264 2-87 (260)
284 PRK09242 tropinone reductase; 95.9 0.058 1.3E-06 48.2 9.5 79 183-264 8-98 (257)
285 PRK08703 short chain dehydroge 95.9 0.036 7.8E-07 49.0 8.0 81 183-264 5-97 (239)
286 PRK08261 fabG 3-ketoacyl-(acyl 95.9 0.018 3.9E-07 56.3 6.6 92 178-288 28-125 (450)
287 PRK08643 acetoin reductase; Va 95.9 0.055 1.2E-06 48.3 9.3 78 184-264 2-89 (256)
288 PRK06172 short chain dehydroge 95.9 0.055 1.2E-06 48.2 9.2 81 183-264 6-94 (253)
289 PRK06181 short chain dehydroge 95.9 0.056 1.2E-06 48.5 9.3 80 184-264 1-88 (263)
290 PRK07985 oxidoreductase; Provi 95.9 0.14 2.9E-06 47.1 12.0 103 182-288 47-187 (294)
291 PRK08085 gluconate 5-dehydroge 95.9 0.067 1.5E-06 47.7 9.7 81 183-264 8-96 (254)
292 PLN02781 Probable caffeoyl-CoA 95.9 0.083 1.8E-06 46.8 10.0 107 175-286 60-178 (234)
293 PRK08159 enoyl-(acyl carrier p 95.8 0.063 1.4E-06 48.7 9.5 82 181-263 7-97 (272)
294 COG2230 Cfa Cyclopropane fatty 95.8 0.055 1.2E-06 48.8 8.7 102 174-289 63-179 (283)
295 TIGR01318 gltD_gamma_fam gluta 95.8 0.032 6.8E-07 54.9 8.0 78 183-266 140-238 (467)
296 PLN02253 xanthoxin dehydrogena 95.8 0.052 1.1E-06 49.2 9.0 79 183-264 17-104 (280)
297 PLN02476 O-methyltransferase 95.8 0.088 1.9E-06 47.6 10.1 107 175-286 110-228 (278)
298 PRK08862 short chain dehydroge 95.8 0.064 1.4E-06 47.2 9.2 80 183-263 4-92 (227)
299 PF03446 NAD_binding_2: NAD bi 95.8 0.2 4.3E-06 41.6 11.6 88 185-287 2-95 (163)
300 PRK08589 short chain dehydroge 95.8 0.058 1.3E-06 48.8 9.2 79 183-264 5-92 (272)
301 PRK06198 short chain dehydroge 95.8 0.054 1.2E-06 48.5 8.8 81 182-264 4-94 (260)
302 PRK07024 short chain dehydroge 95.8 0.068 1.5E-06 47.8 9.5 77 184-263 2-87 (257)
303 PRK06125 short chain dehydroge 95.8 0.089 1.9E-06 47.1 10.2 79 183-264 6-91 (259)
304 PRK13394 3-hydroxybutyrate deh 95.8 0.065 1.4E-06 47.9 9.3 81 183-264 6-94 (262)
305 PRK07453 protochlorophyllide o 95.8 0.062 1.3E-06 50.0 9.4 78 183-263 5-92 (322)
306 PF01596 Methyltransf_3: O-met 95.8 0.036 7.9E-07 47.9 7.2 105 177-287 39-156 (205)
307 PRK06079 enoyl-(acyl carrier p 95.8 0.063 1.4E-06 48.0 9.1 80 183-263 6-92 (252)
308 PRK12823 benD 1,6-dihydroxycyc 95.8 0.055 1.2E-06 48.4 8.7 78 183-263 7-93 (260)
309 PRK12384 sorbitol-6-phosphate 95.8 0.061 1.3E-06 48.1 9.0 80 184-264 2-91 (259)
310 PF00106 adh_short: short chai 95.8 0.035 7.6E-07 45.9 6.9 80 185-264 1-90 (167)
311 PRK12367 short chain dehydroge 95.7 0.075 1.6E-06 47.4 9.4 75 183-264 13-89 (245)
312 PRK12481 2-deoxy-D-gluconate 3 95.7 0.065 1.4E-06 47.8 9.1 79 183-264 7-93 (251)
313 cd01075 NAD_bind_Leu_Phe_Val_D 95.7 0.09 2E-06 45.3 9.5 81 182-276 26-107 (200)
314 PRK06482 short chain dehydroge 95.7 0.068 1.5E-06 48.4 9.3 77 185-264 3-86 (276)
315 PRK06483 dihydromonapterin red 95.7 0.08 1.7E-06 46.6 9.5 78 184-264 2-84 (236)
316 PRK05876 short chain dehydroge 95.7 0.07 1.5E-06 48.4 9.3 79 183-264 5-93 (275)
317 PRK15116 sulfur acceptor prote 95.7 0.28 6E-06 44.2 12.8 102 183-287 29-154 (268)
318 PRK08251 short chain dehydroge 95.7 0.079 1.7E-06 47.0 9.5 77 184-263 2-90 (248)
319 PRK06914 short chain dehydroge 95.7 0.069 1.5E-06 48.4 9.2 78 183-264 2-91 (280)
320 PRK12809 putative oxidoreducta 95.7 0.064 1.4E-06 54.9 9.8 77 183-265 309-406 (639)
321 cd01078 NAD_bind_H4MPT_DH NADP 95.7 0.11 2.3E-06 44.6 9.8 77 182-266 26-109 (194)
322 PRK14192 bifunctional 5,10-met 95.7 0.085 1.8E-06 48.0 9.5 77 181-288 156-233 (283)
323 PRK06101 short chain dehydroge 95.7 0.079 1.7E-06 46.9 9.3 43 185-228 2-45 (240)
324 PRK06114 short chain dehydroge 95.7 0.076 1.7E-06 47.4 9.2 81 183-264 7-96 (254)
325 PRK07067 sorbitol dehydrogenas 95.6 0.085 1.8E-06 47.1 9.5 80 183-263 5-89 (257)
326 COG2519 GCD14 tRNA(1-methylade 95.6 0.12 2.6E-06 45.5 9.8 103 176-287 87-196 (256)
327 PRK08993 2-deoxy-D-gluconate 3 95.6 0.084 1.8E-06 47.1 9.4 81 183-264 9-95 (253)
328 TIGR00507 aroE shikimate 5-deh 95.6 0.1 2.2E-06 47.4 9.8 93 181-287 114-215 (270)
329 PF02254 TrkA_N: TrkA-N domain 95.6 0.38 8.2E-06 37.1 11.9 92 187-285 1-95 (116)
330 PRK12937 short chain dehydroge 95.6 0.24 5.3E-06 43.7 12.1 104 182-287 3-140 (245)
331 PRK06701 short chain dehydroge 95.6 0.19 4.2E-06 46.0 11.7 37 181-218 43-80 (290)
332 COG1179 Dinucleotide-utilizing 95.6 0.23 4.9E-06 43.5 11.1 101 183-287 29-154 (263)
333 PRK06179 short chain dehydroge 95.6 0.039 8.4E-07 49.8 7.0 77 183-264 3-83 (270)
334 COG2226 UbiE Methylase involve 95.6 0.14 3.1E-06 45.2 10.1 105 176-288 44-158 (238)
335 KOG1014 17 beta-hydroxysteroid 95.6 0.11 2.3E-06 47.2 9.4 79 182-264 47-136 (312)
336 PRK08264 short chain dehydroge 95.6 0.086 1.9E-06 46.4 9.0 75 183-264 5-83 (238)
337 PRK07984 enoyl-(acyl carrier p 95.6 0.095 2E-06 47.2 9.4 80 183-263 5-93 (262)
338 PRK06720 hypothetical protein; 95.5 0.12 2.6E-06 43.3 9.3 39 183-222 15-54 (169)
339 KOG0725 Reductases with broad 95.5 0.06 1.3E-06 48.8 8.0 82 182-264 6-99 (270)
340 PRK07856 short chain dehydroge 95.5 0.066 1.4E-06 47.7 8.3 75 183-264 5-85 (252)
341 PRK06935 2-deoxy-D-gluconate 3 95.5 0.067 1.5E-06 47.9 8.3 80 183-264 14-101 (258)
342 PRK12826 3-ketoacyl-(acyl-carr 95.5 0.089 1.9E-06 46.6 9.0 81 183-264 5-93 (251)
343 PRK05562 precorrin-2 dehydroge 95.5 0.1 2.2E-06 45.6 8.9 93 182-287 23-117 (223)
344 PRK04457 spermidine synthase; 95.5 0.2 4.3E-06 45.2 11.1 94 182-284 65-175 (262)
345 PRK07574 formate dehydrogenase 95.5 0.15 3.2E-06 48.6 10.7 89 183-286 191-284 (385)
346 PRK08226 short chain dehydroge 95.5 0.1 2.2E-06 46.7 9.4 79 183-264 5-92 (263)
347 PRK12747 short chain dehydroge 95.5 0.31 6.6E-06 43.4 12.4 38 183-221 3-42 (252)
348 COG2910 Putative NADH-flavin r 95.5 0.15 3.2E-06 42.7 9.1 93 186-287 2-105 (211)
349 PRK12936 3-ketoacyl-(acyl-carr 95.4 0.11 2.4E-06 45.8 9.4 81 183-264 5-90 (245)
350 PRK06124 gluconate 5-dehydroge 95.4 0.11 2.4E-06 46.3 9.4 80 182-264 9-98 (256)
351 PF00899 ThiF: ThiF family; I 95.4 0.13 2.8E-06 41.2 8.8 97 184-286 2-124 (135)
352 PRK07074 short chain dehydroge 95.4 0.11 2.3E-06 46.4 9.3 78 184-264 2-87 (257)
353 PRK08219 short chain dehydroge 95.4 0.21 4.5E-06 43.5 10.9 75 184-264 3-81 (227)
354 KOG1201 Hydroxysteroid 17-beta 95.4 0.096 2.1E-06 47.2 8.6 81 181-264 35-124 (300)
355 PRK06113 7-alpha-hydroxysteroi 95.4 0.11 2.4E-06 46.3 9.3 79 183-264 10-98 (255)
356 PRK06077 fabG 3-ketoacyl-(acyl 95.4 0.36 7.8E-06 42.8 12.5 102 183-288 5-142 (252)
357 PF03807 F420_oxidored: NADP o 95.4 0.55 1.2E-05 34.8 11.7 85 186-285 1-93 (96)
358 PLN03139 formate dehydrogenase 95.4 0.13 2.9E-06 48.9 9.9 89 183-286 198-291 (386)
359 PRK12475 thiamine/molybdopteri 95.4 0.17 3.7E-06 47.4 10.6 36 183-218 23-58 (338)
360 PRK06398 aldose dehydrogenase; 95.3 0.055 1.2E-06 48.5 7.2 74 183-264 5-82 (258)
361 PRK07666 fabG 3-ketoacyl-(acyl 95.3 0.12 2.6E-06 45.6 9.2 81 183-264 6-94 (239)
362 PRK06484 short chain dehydroge 95.3 0.088 1.9E-06 52.5 9.2 79 183-264 4-89 (520)
363 PRK05884 short chain dehydroge 95.3 0.12 2.6E-06 45.3 9.1 74 186-263 2-78 (223)
364 TIGR00477 tehB tellurite resis 95.3 0.13 2.7E-06 44.2 8.9 99 176-286 23-133 (195)
365 cd01483 E1_enzyme_family Super 95.3 0.27 5.8E-06 39.8 10.4 32 186-217 1-32 (143)
366 PRK06463 fabG 3-ketoacyl-(acyl 95.3 0.12 2.5E-06 46.2 9.0 79 183-264 6-89 (255)
367 TIGR03840 TMPT_Se_Te thiopurin 95.3 0.17 3.7E-06 44.1 9.7 102 182-287 33-153 (213)
368 COG2227 UbiG 2-polyprenyl-3-me 95.3 0.19 4.1E-06 44.0 9.7 97 182-287 58-162 (243)
369 PRK08945 putative oxoacyl-(acy 95.2 0.14 3.1E-06 45.4 9.4 84 180-264 8-102 (247)
370 PRK07340 ornithine cyclodeamin 95.2 0.13 2.8E-06 47.5 9.3 103 182-299 123-229 (304)
371 cd00755 YgdL_like Family of ac 95.2 0.22 4.8E-06 43.9 10.3 98 184-286 11-134 (231)
372 PRK07688 thiamine/molybdopteri 95.2 0.17 3.8E-06 47.3 10.2 35 183-217 23-57 (339)
373 PRK10538 malonic semialdehyde 95.2 0.13 2.8E-06 45.8 9.1 76 186-264 2-84 (248)
374 PRK08317 hypothetical protein; 95.2 0.24 5.3E-06 43.4 10.8 102 175-286 11-124 (241)
375 PRK12769 putative oxidoreducta 95.2 0.1 2.2E-06 53.6 9.4 76 183-264 326-422 (654)
376 PRK08644 thiamine biosynthesis 95.2 0.2 4.3E-06 43.6 9.9 35 183-217 27-61 (212)
377 PRK08220 2,3-dihydroxybenzoate 95.2 0.24 5.3E-06 43.9 10.9 74 183-264 7-86 (252)
378 TIGR01963 PHB_DH 3-hydroxybuty 95.2 0.13 2.9E-06 45.7 9.1 78 184-264 1-88 (255)
379 PRK08328 hypothetical protein; 95.2 0.18 3.8E-06 44.6 9.7 34 183-216 26-59 (231)
380 PLN00203 glutamyl-tRNA reducta 95.2 0.15 3.3E-06 50.4 10.1 96 183-288 265-371 (519)
381 PRK08762 molybdopterin biosynt 95.2 0.23 5E-06 47.3 11.1 35 183-217 134-168 (376)
382 PRK07066 3-hydroxybutyryl-CoA 95.1 0.51 1.1E-05 43.8 12.9 39 185-224 8-46 (321)
383 TIGR02355 moeB molybdopterin s 95.1 0.18 3.8E-06 44.8 9.5 34 184-217 24-57 (240)
384 PLN00141 Tic62-NAD(P)-related 95.1 0.15 3.2E-06 45.6 9.2 100 182-287 15-132 (251)
385 PRK07097 gluconate 5-dehydroge 95.1 0.16 3.5E-06 45.6 9.5 81 183-264 9-97 (265)
386 PRK07102 short chain dehydroge 95.1 0.19 4.2E-06 44.4 9.9 39 185-224 2-41 (243)
387 PRK08594 enoyl-(acyl carrier p 95.1 0.13 2.7E-06 46.2 8.8 78 183-263 6-96 (257)
388 PRK06849 hypothetical protein; 95.1 0.68 1.5E-05 44.3 14.3 94 183-278 3-100 (389)
389 COG0569 TrkA K+ transport syst 95.1 0.23 4.9E-06 43.7 10.1 81 186-273 2-84 (225)
390 PF08704 GCD14: tRNA methyltra 95.1 0.069 1.5E-06 47.5 6.8 108 175-287 32-147 (247)
391 PRK06997 enoyl-(acyl carrier p 95.1 0.14 3E-06 46.1 9.0 80 183-263 5-93 (260)
392 PRK05690 molybdopterin biosynt 95.1 0.21 4.6E-06 44.5 10.0 34 183-216 31-64 (245)
393 PRK07791 short chain dehydroge 95.1 0.17 3.8E-06 46.1 9.7 36 182-218 4-40 (286)
394 PRK08303 short chain dehydroge 95.1 0.15 3.2E-06 47.2 9.3 34 183-217 7-41 (305)
395 TIGR02354 thiF_fam2 thiamine b 95.1 0.071 1.5E-06 46.0 6.6 35 183-217 20-54 (200)
396 PRK07775 short chain dehydroge 95.1 0.16 3.5E-06 45.9 9.4 81 183-264 9-97 (274)
397 cd00757 ThiF_MoeB_HesA_family 95.1 0.33 7.2E-06 42.7 11.1 33 184-216 21-53 (228)
398 PRK06940 short chain dehydroge 95.0 0.16 3.6E-06 46.0 9.4 99 184-287 2-126 (275)
399 PRK07577 short chain dehydroge 95.0 0.1 2.2E-06 45.8 7.7 74 183-264 2-78 (234)
400 PRK07792 fabG 3-ketoacyl-(acyl 95.0 0.21 4.6E-06 46.1 10.0 81 183-264 11-99 (306)
401 COG1648 CysG Siroheme synthase 94.9 0.2 4.4E-06 43.4 9.1 94 183-288 11-105 (210)
402 COG0334 GdhA Glutamate dehydro 94.9 0.22 4.8E-06 47.0 9.8 59 158-219 182-241 (411)
403 COG0421 SpeE Spermidine syntha 94.9 0.38 8.2E-06 43.7 11.1 99 185-286 78-190 (282)
404 PF02558 ApbA: Ketopantoate re 94.9 0.095 2.1E-06 42.8 6.7 94 187-286 1-101 (151)
405 COG0031 CysK Cysteine synthase 94.9 1.2 2.5E-05 40.7 14.1 61 176-236 54-116 (300)
406 PRK06523 short chain dehydroge 94.8 0.13 2.7E-06 46.1 8.0 37 183-220 8-45 (260)
407 PRK01683 trans-aconitate 2-met 94.8 0.36 7.7E-06 43.3 10.9 97 177-285 25-129 (258)
408 PRK08278 short chain dehydroge 94.8 0.17 3.7E-06 45.8 8.8 36 183-219 5-41 (273)
409 PRK08063 enoyl-(acyl carrier p 94.8 0.2 4.3E-06 44.4 9.1 81 183-264 3-92 (250)
410 PRK12743 oxidoreductase; Provi 94.8 0.2 4.3E-06 44.8 9.1 80 184-264 2-90 (256)
411 PLN02589 caffeoyl-CoA O-methyl 94.8 0.26 5.7E-06 43.9 9.6 104 175-284 71-188 (247)
412 PLN02823 spermine synthase 94.8 0.3 6.6E-06 45.6 10.4 100 183-285 103-219 (336)
413 PRK08416 7-alpha-hydroxysteroi 94.8 0.24 5.1E-06 44.4 9.5 80 183-263 7-96 (260)
414 PRK01438 murD UDP-N-acetylmura 94.7 0.23 4.9E-06 49.1 10.1 70 182-264 14-88 (480)
415 PRK05650 short chain dehydroge 94.7 0.2 4.4E-06 45.1 9.0 79 185-264 1-87 (270)
416 PRK15469 ghrA bifunctional gly 94.7 0.22 4.7E-06 46.2 9.2 89 182-287 134-227 (312)
417 cd01492 Aos1_SUMO Ubiquitin ac 94.7 0.36 7.9E-06 41.5 10.0 35 183-217 20-54 (197)
418 PRK14194 bifunctional 5,10-met 94.7 0.28 6.1E-06 44.8 9.7 94 163-288 138-233 (301)
419 PRK07424 bifunctional sterol d 94.7 0.23 5E-06 47.7 9.6 76 183-264 177-255 (406)
420 PRK13243 glyoxylate reductase; 94.6 0.28 6.1E-06 45.9 10.0 87 183-286 149-240 (333)
421 PRK14103 trans-aconitate 2-met 94.6 0.41 8.9E-06 42.9 10.7 97 175-285 21-125 (255)
422 PF01408 GFO_IDH_MocA: Oxidore 94.6 0.97 2.1E-05 35.0 11.7 87 186-286 2-92 (120)
423 PRK14106 murD UDP-N-acetylmura 94.6 0.22 4.9E-06 48.6 9.6 71 183-265 4-79 (450)
424 PRK05565 fabG 3-ketoacyl-(acyl 94.6 0.25 5.5E-06 43.5 9.2 80 184-264 5-93 (247)
425 PRK07370 enoyl-(acyl carrier p 94.6 0.2 4.2E-06 45.0 8.5 104 183-288 5-149 (258)
426 PRK11036 putative S-adenosyl-L 94.6 0.25 5.4E-06 44.3 9.1 94 182-286 43-149 (255)
427 KOG1252 Cystathionine beta-syn 94.6 0.42 9E-06 43.8 10.3 57 177-234 96-156 (362)
428 TIGR01289 LPOR light-dependent 94.5 0.27 5.8E-06 45.6 9.6 77 184-263 3-90 (314)
429 TIGR02632 RhaD_aldol-ADH rhamn 94.5 0.2 4.3E-06 51.6 9.4 81 183-264 413-503 (676)
430 PLN02520 bifunctional 3-dehydr 94.5 0.16 3.5E-06 50.7 8.3 93 183-287 378-476 (529)
431 PF02670 DXP_reductoisom: 1-de 94.5 0.7 1.5E-05 36.6 10.3 92 187-285 1-119 (129)
432 PLN03075 nicotianamine synthas 94.5 0.31 6.7E-06 44.5 9.4 99 182-286 122-233 (296)
433 PRK01581 speE spermidine synth 94.4 0.59 1.3E-05 43.9 11.4 97 181-286 148-268 (374)
434 TIGR02622 CDP_4_6_dhtase CDP-g 94.4 0.2 4.4E-06 47.1 8.7 77 183-264 3-85 (349)
435 PRK06171 sorbitol-6-phosphate 94.4 0.13 2.7E-06 46.3 7.0 75 183-263 8-86 (266)
436 PLN02244 tocopherol O-methyltr 94.4 0.14 3E-06 48.1 7.5 94 182-286 117-223 (340)
437 cd01487 E1_ThiF_like E1_ThiF_l 94.4 0.33 7.1E-06 40.8 9.0 33 186-218 1-33 (174)
438 KOG4022 Dihydropteridine reduc 94.4 0.32 7E-06 39.7 8.3 96 185-287 4-130 (236)
439 PRK05447 1-deoxy-D-xylulose 5- 94.4 0.56 1.2E-05 44.3 11.2 98 185-284 2-120 (385)
440 PLN02928 oxidoreductase family 94.4 0.28 6.1E-06 46.1 9.3 97 182-287 157-263 (347)
441 PRK05557 fabG 3-ketoacyl-(acyl 94.4 0.3 6.4E-06 43.0 9.1 79 183-264 4-93 (248)
442 PRK02472 murD UDP-N-acetylmura 94.3 0.31 6.7E-06 47.6 9.9 71 183-264 4-78 (447)
443 TIGR01829 AcAcCoA_reduct aceto 94.3 0.21 4.6E-06 43.9 8.1 79 185-264 1-88 (242)
444 PRK05855 short chain dehydroge 94.3 0.23 5E-06 49.9 9.4 79 183-264 314-402 (582)
445 PRK06141 ornithine cyclodeamin 94.3 1.1 2.4E-05 41.6 13.0 103 182-299 123-231 (314)
446 PRK14188 bifunctional 5,10-met 94.3 0.39 8.5E-06 43.9 9.7 93 163-288 137-232 (296)
447 PF07991 IlvN: Acetohydroxy ac 94.3 0.71 1.5E-05 38.0 10.2 87 183-286 3-94 (165)
448 PRK05597 molybdopterin biosynt 94.3 0.36 7.7E-06 45.6 9.8 35 183-217 27-61 (355)
449 cd05212 NAD_bind_m-THF_DH_Cycl 94.3 0.48 1E-05 38.2 9.1 94 163-288 7-102 (140)
450 PRK13656 trans-2-enoyl-CoA red 94.2 0.29 6.3E-06 46.3 8.9 82 182-265 39-142 (398)
451 TIGR01505 tartro_sem_red 2-hyd 94.2 0.48 1E-05 43.4 10.4 70 186-269 1-70 (291)
452 PRK14191 bifunctional 5,10-met 94.2 0.43 9.3E-06 43.3 9.7 94 163-288 136-231 (285)
453 PLN00016 RNA-binding protein; 94.2 0.5 1.1E-05 45.0 10.9 97 182-287 50-165 (378)
454 PRK07417 arogenate dehydrogena 94.2 0.39 8.5E-06 43.7 9.7 68 186-266 2-69 (279)
455 PRK10258 biotin biosynthesis p 94.2 1.8 3.9E-05 38.6 13.9 96 180-287 39-141 (251)
456 PRK09135 pteridine reductase; 94.2 0.38 8.3E-06 42.4 9.5 35 183-218 5-40 (249)
457 TIGR02415 23BDH acetoin reduct 94.2 0.32 7E-06 43.2 9.0 77 185-264 1-87 (254)
458 PRK05600 thiamine biosynthesis 94.2 0.41 9E-06 45.4 10.0 35 183-217 40-74 (370)
459 PRK00312 pcm protein-L-isoaspa 94.1 0.23 4.9E-06 43.2 7.7 98 176-285 71-174 (212)
460 TIGR00138 gidB 16S rRNA methyl 94.1 0.15 3.3E-06 43.1 6.4 92 183-285 42-141 (181)
461 PLN02256 arogenate dehydrogena 94.1 0.88 1.9E-05 42.0 11.9 97 175-287 27-128 (304)
462 PRK13255 thiopurine S-methyltr 94.1 0.57 1.2E-05 40.9 10.1 100 180-285 34-154 (218)
463 PLN02986 cinnamyl-alcohol dehy 94.1 0.35 7.6E-06 44.8 9.4 38 183-221 4-42 (322)
464 TIGR00563 rsmB ribosomal RNA s 94.1 0.56 1.2E-05 45.5 11.0 103 177-287 232-369 (426)
465 PRK08936 glucose-1-dehydrogena 94.1 0.38 8.3E-06 43.0 9.3 80 182-264 5-95 (261)
466 PRK12746 short chain dehydroge 94.1 0.44 9.6E-06 42.3 9.7 39 183-222 5-45 (254)
467 PRK07201 short chain dehydroge 94.1 0.26 5.7E-06 50.6 9.2 78 184-264 371-458 (657)
468 PLN02657 3,8-divinyl protochlo 94.0 0.31 6.7E-06 46.7 9.0 41 179-220 55-96 (390)
469 PRK10669 putative cation:proto 94.0 0.49 1.1E-05 47.7 10.8 76 185-266 418-493 (558)
470 PTZ00079 NADP-specific glutama 94.0 1.2 2.6E-05 43.1 12.7 35 182-217 235-270 (454)
471 PRK12938 acetyacetyl-CoA reduc 94.0 0.26 5.6E-06 43.6 8.0 79 183-264 2-91 (246)
472 PRK12749 quinate/shikimate deh 93.9 0.22 4.9E-06 45.5 7.5 38 182-219 122-159 (288)
473 PRK08287 cobalt-precorrin-6Y C 93.9 0.42 9.1E-06 40.6 8.8 97 177-285 25-130 (187)
474 PF07021 MetW: Methionine bios 93.9 0.67 1.4E-05 39.3 9.6 70 181-259 11-80 (193)
475 TIGR02992 ectoine_eutC ectoine 93.9 0.88 1.9E-05 42.5 11.6 103 182-299 127-236 (326)
476 PRK07819 3-hydroxybutyryl-CoA 93.9 0.73 1.6E-05 42.1 10.8 38 185-223 6-43 (286)
477 KOG1502 Flavonol reductase/cin 93.9 0.4 8.6E-06 44.2 8.9 75 183-263 5-87 (327)
478 PRK11559 garR tartronate semia 93.9 0.75 1.6E-05 42.2 11.0 67 186-266 4-70 (296)
479 PRK14618 NAD(P)H-dependent gly 93.8 0.83 1.8E-05 42.6 11.4 95 185-287 5-105 (328)
480 PTZ00098 phosphoethanolamine N 93.8 0.37 8E-06 43.5 8.7 104 175-287 44-157 (263)
481 PRK09730 putative NAD(P)-bindi 93.8 0.46 9.9E-06 41.9 9.3 77 185-264 2-89 (247)
482 TIGR03215 ac_ald_DH_ac acetald 93.8 0.65 1.4E-05 42.3 10.2 87 186-285 3-93 (285)
483 PRK14189 bifunctional 5,10-met 93.8 0.42 9.1E-06 43.4 8.9 94 163-288 137-232 (285)
484 TIGR00446 nop2p NOL1/NOP2/sun 93.8 1.3 2.7E-05 40.0 12.0 100 179-286 67-199 (264)
485 PRK08300 acetaldehyde dehydrog 93.8 0.82 1.8E-05 41.9 10.7 94 185-286 5-101 (302)
486 PRK00121 trmB tRNA (guanine-N( 93.8 0.51 1.1E-05 40.7 9.1 96 183-286 40-156 (202)
487 PRK12745 3-ketoacyl-(acyl-carr 93.7 0.43 9.3E-06 42.4 9.0 78 184-264 2-90 (256)
488 PRK12480 D-lactate dehydrogena 93.7 0.73 1.6E-05 43.1 10.7 86 183-287 145-235 (330)
489 PRK10792 bifunctional 5,10-met 93.7 0.49 1.1E-05 42.9 9.2 94 163-288 138-233 (285)
490 PRK13403 ketol-acid reductoiso 93.7 0.78 1.7E-05 42.3 10.5 89 181-286 13-105 (335)
491 PRK03562 glutathione-regulated 93.7 0.56 1.2E-05 47.9 10.6 77 184-266 400-476 (621)
492 PLN02989 cinnamyl-alcohol dehy 93.7 0.39 8.5E-06 44.5 8.9 38 183-221 4-42 (325)
493 TIGR00417 speE spermidine synt 93.7 0.74 1.6E-05 41.7 10.4 102 182-286 71-186 (270)
494 PRK07069 short chain dehydroge 93.6 0.35 7.5E-06 42.8 8.1 76 186-264 1-89 (251)
495 PRK07889 enoyl-(acyl carrier p 93.6 0.45 9.8E-06 42.5 8.8 79 183-264 6-95 (256)
496 PF01210 NAD_Gly3P_dh_N: NAD-d 93.6 0.6 1.3E-05 38.5 8.8 85 186-277 1-91 (157)
497 PF01564 Spermine_synth: Sperm 93.6 0.42 9E-06 42.7 8.4 97 182-286 75-191 (246)
498 PLN02662 cinnamyl-alcohol dehy 93.6 0.35 7.6E-06 44.7 8.3 37 183-220 3-40 (322)
499 PRK12825 fabG 3-ketoacyl-(acyl 93.5 0.44 9.4E-06 41.9 8.6 78 183-263 5-93 (249)
500 TIGR00452 methyltransferase, p 93.5 0.45 9.7E-06 44.0 8.8 97 176-285 114-224 (314)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.1e-64 Score=444.53 Aligned_cols=359 Identities=45% Similarity=0.802 Sum_probs=340.8
Q ss_pred CCccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 1 MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 1 ~~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
|.++.+++|+++++++++|++|||+||+.|+++|++|.+.++|..+.+ +|.++|||.+|+|++||+.|+.+++||+|
T Consensus 7 V~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~---~P~vLGHEgAGiVe~VG~gVt~vkpGDhV 83 (366)
T COG1062 7 VAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG---FPAVLGHEGAGIVEAVGEGVTSVKPGDHV 83 (366)
T ss_pred eeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC---CceecccccccEEEEecCCccccCCCCEE
Confidence 467889999999999999999999999999999999999999987764 99999999999999999999999999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
+..+.-.||+|++|.++.+|+|......-..|...+|+.+|- .++..++|+.+.++|++|.++++..++|++++.+++.
T Consensus 84 I~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~ 162 (366)
T COG1062 84 ILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-GNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEK 162 (366)
T ss_pred EEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-cCCcceeeeeccccchhheeecccceEECCCCCCccc
Confidence 999999999999999999999998887767888899988886 7788899999999999999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
++.+.|...|.+.++.+.+++++|++|.|+|.|++|++++|-|+..|+.+||+++.+++|+++++++|+++++|..+
T Consensus 163 a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~--- 239 (366)
T COG1062 163 ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKE--- 239 (366)
T ss_pred eEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchh---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred c-cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457 241 K-TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~-~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (371)
. +.++.+.++|++|+|++|||+|+...+++++.+..++ |+.+..|........+++...+..+.++.|+.++..+.+.
T Consensus 240 ~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~~ 318 (366)
T COG1062 240 VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPRS 318 (366)
T ss_pred hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCCcccc
Confidence 4 6999999999999999999999999999999999995 9999999877777888999998889999999999998889
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
++.++++++.+|++.+.+++++.++|+|++|||+.+.+++..|-|+.|
T Consensus 319 diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 319 DIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred chhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 999999999999999999999999999999999999999999877754
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.6e-63 Score=430.57 Aligned_cols=363 Identities=57% Similarity=0.976 Sum_probs=344.2
Q ss_pred CCccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 1 MQRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 1 ~~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
|.++++++|.++|++.+||+.+||+||+.++++|++|.+.++|..+.. .||.++|||.+|+|+.+|+.|+++++||+|
T Consensus 12 V~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~--~fP~IlGHEaaGIVESvGegV~~vk~GD~V 89 (375)
T KOG0022|consen 12 VAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEG--LFPVILGHEAAGIVESVGEGVTTVKPGDHV 89 (375)
T ss_pred eeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccc--cCceEecccceeEEEEecCCccccCCCCEE
Confidence 568999999999999999999999999999999999999999987665 899999999999999999999999999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCC-CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYR-PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 159 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~ 159 (371)
+....-.|++|++|+++..|+|.+.+.... .++.++|+.+|- .+|..++||.+..+|+||.+++...++++++..+++
T Consensus 90 iplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~-~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~ 168 (375)
T KOG0022|consen 90 IPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT-CKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLE 168 (375)
T ss_pred eeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-eCCCceEEecccccceeEEEeecceeEecCCCCChh
Confidence 999999999999999999999999887643 556679999998 778889999999999999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457 160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
.++.+.|...|+|.++++.+.+++|+++.|+|.|++|+++++-||+.|++++|+++.+++|.+.++++|+++++|+.+ .
T Consensus 169 kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~ 247 (375)
T KOG0022|consen 169 KVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-L 247 (375)
T ss_pred heeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhh-c
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999884 2
Q ss_pred CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (371)
.....+.+++.|++|+|+.|+|+|....+.+++.+...+||.-+.+|....++..++.++.++.+.++.|+.++.++++.
T Consensus 248 ~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~K~~~ 327 (375)
T KOG0022|consen 248 KKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGFKSKS 327 (375)
T ss_pred cccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccccchh
Confidence 23688899999999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
++..+++.+.++++.+..+++|++||+++++||+.+.++++.|.|+.+
T Consensus 328 ~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 328 DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 999999999999999999999999999999999999999999988864
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=3.1e-63 Score=448.12 Aligned_cols=327 Identities=31% Similarity=0.483 Sum_probs=295.9
Q ss_pred CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457 2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
+.+.+.++++++++.|+|+++||+|+|+|+|+|++|++.++|.++.. .+|.+||||.+|+|+++|++|+.||+||+|.
T Consensus 9 ~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~~k~GDrVg 86 (339)
T COG1064 9 LKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVP--KLPLIPGHEIVGTVVEVGEGVTGLKVGDRVG 86 (339)
T ss_pred EccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCC--CCCccCCcceEEEEEEecCCCccCCCCCEEE
Confidence 34566679999999999999999999999999999999999999888 7999999999999999999999999999998
Q ss_pred e-ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 82 P-IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 82 ~-~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
+ +...+|+.|+||++|++++|+.... .|++.+| +|+||+++++.+++++|+++++++
T Consensus 87 V~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G-------------------Gyaeyv~v~~~~~~~iP~~~d~~~ 144 (339)
T COG1064 87 VGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG-------------------GYAEYVVVPARYVVKIPEGLDLAE 144 (339)
T ss_pred ecCccCCCCCCccccCcccccCCCccc---cceeecC-------------------cceeEEEEchHHeEECCCCCChhh
Confidence 8 9999999999999999999999776 8888887 999999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
||.+.|++.|.|++| +.++++||++|+|+|+|++|++|+|+|+++|+ +|++++++++|++.++++|++++++..+
T Consensus 145 aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~--- 219 (339)
T COG1064 145 AAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSD--- 219 (339)
T ss_pred hhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---
Confidence 999999999999976 55999999999999999999999999999998 9999999999999999999999999765
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 319 (371)
++..+.+++. +|+++|+++ +..++.+++.|+++ |+++..|.........++.+.++. ++++.|+..++ +.
T Consensus 220 ~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~ 290 (339)
T COG1064 220 SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RA 290 (339)
T ss_pred chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HH
Confidence 6676666653 999999999 77799999999998 999999985323345566666555 89999998776 57
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 368 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~ 368 (371)
+++++++|..+|++.+. +.+.++++++++|++.+.+++.. |+|+++.
T Consensus 291 d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 291 DLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 89999999999977655 53699999999999999998876 9998875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-57 Score=395.75 Aligned_cols=338 Identities=25% Similarity=0.414 Sum_probs=292.0
Q ss_pred CccCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457 2 QRIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDL 79 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 79 (371)
++.+..++++++.|.|++ .|+||+|++.+++||++|+|.++... ..+..+.|+++|||.+|+|.++|+.|+++|+|||
T Consensus 9 vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDr 88 (354)
T KOG0024|consen 9 VLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDR 88 (354)
T ss_pred EEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCe
Confidence 345556689999999987 99999999999999999999997544 3333368999999999999999999999999999
Q ss_pred EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457 80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 158 (371)
Q Consensus 80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~ 158 (371)
|++-+..+|+.|++|+.|++|+|+.+.+ .+.. .+| ++++|+++++++++|+|+++|+
T Consensus 89 VaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G-------------------~la~y~~~~~dfc~KLPd~vs~ 146 (354)
T KOG0024|consen 89 VAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG-------------------TLAEYYVHPADFCYKLPDNVSF 146 (354)
T ss_pred EEecCCCccccchhhhCcccccCCcccc---ccCCCcCC-------------------ceEEEEEechHheeeCCCCCch
Confidence 9999999999999999999999999997 3333 444 9999999999999999999999
Q ss_pred chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457 159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238 (371)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 238 (371)
+++|.+. ++++++|+ .+++++++|.+|||+|+|++|+++...||++|+.+|++++..++|++.++++|++.+.+....
T Consensus 147 eeGAl~e-PLsV~~HA-cr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~ 224 (354)
T KOG0024|consen 147 EEGALIE-PLSVGVHA-CRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHK 224 (354)
T ss_pred hhccccc-chhhhhhh-hhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeecccc
Confidence 9999998 89999996 588999999999999999999999999999999999999999999999999999988776552
Q ss_pred C-CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC
Q 017457 239 G-DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL 315 (371)
Q Consensus 239 ~-~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 315 (371)
. .+++.+.+....+. .+|++|||+|....++.++..++.+ |++++.|. +....+|+...... ++.+.|++-+.
T Consensus 225 ~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~--g~~~~~fpi~~v~~kE~~~~g~fry~- 300 (354)
T KOG0024|consen 225 SSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGM--GAEEIQFPIIDVALKEVDLRGSFRYC- 300 (354)
T ss_pred ccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEecc--CCCccccChhhhhhheeeeeeeeeec-
Confidence 1 23344444444443 5999999999999899999999997 99999986 34566777776555 89999985222
Q ss_pred CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEEEeCc
Q 017457 316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWMDK 369 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~~~ 369 (371)
+.++..+++++++|++++++++++.|+++++.+||+.+.++.. .|+++...+
T Consensus 301 --~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 301 --NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred --cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 4589999999999999999999999999999999999988764 499987653
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=9.8e-56 Score=386.12 Aligned_cols=330 Identities=26% Similarity=0.425 Sum_probs=287.6
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE-eeccCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV-LPIFHR 86 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V-~~~~~~ 86 (371)
++++.+++.|+|.++||+|+|+|||||++|++.+.|.+... .+|.++|||.+|+|+++|++|+.|++|||| +.+..-
T Consensus 23 ~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s--~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~ 100 (360)
T KOG0023|consen 23 SPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLS--KYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNG 100 (360)
T ss_pred CcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcc--cCCccCCceeeEEEEEECCCcccccccCeeeeeEEec
Confidence 45668999999999999999999999999999999999886 899999999999999999999999999999 667778
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
+|+.|+||+.+.+++|++.-.. ..|+..+| +-.+|+||+|+++++.+++++|+++++++||.+.|
T Consensus 101 sC~~CE~C~~~~E~yCpk~~~t-~~g~~~DG--------------t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLC 165 (360)
T KOG0023|consen 101 SCLSCEYCKSGNENYCPKMHFT-YNGVYHDG--------------TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLC 165 (360)
T ss_pred cccCccccccCCcccCCceeEe-ccccccCC--------------CCccCccceeEEEeeeeEEECCCCCChhhccchhh
Confidence 8999999999999999953321 26677777 33347899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
++.|.|..| ...++.||+++-|.|+|++|++++|+||++|+ +|++++++. .|.+.++.||++.+++..+ ++++.+
T Consensus 166 aGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~ 241 (360)
T KOG0023|consen 166 AGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMK 241 (360)
T ss_pred cceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHH
Confidence 999999965 56788899999999997799999999999999 999999988 4555567799999888763 388999
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 324 (371)
.+.+.+++++|-|.+. ....++.++..++.+ |++|++|.... ...++.+++.- .+++.|+..+. +.+.+++
T Consensus 242 ~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~GS~vG~---~ket~E~ 313 (360)
T KOG0023|consen 242 AIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKGSIVGS---RKETQEA 313 (360)
T ss_pred HHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEeecccc---HHHHHHH
Confidence 9999988888888876 344489999999998 99999998543 56666666655 78999998777 5689999
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
+++..++.+... + +..+++++++||+.+.++... |.++++..
T Consensus 314 Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s~ 356 (360)
T KOG0023|consen 314 LDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVSK 356 (360)
T ss_pred HHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEccc
Confidence 999999977655 6 999999999999999998876 99998864
No 6
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.4e-52 Score=396.07 Aligned_cols=361 Identities=45% Similarity=0.828 Sum_probs=293.8
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
..+++.++++++|.|+|.++||+|||.++++|++|++.+.|.++.. .+|.++|||++|+|+++|+.+++|++||+|++
T Consensus 8 ~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~ 85 (368)
T TIGR02818 8 WAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG--VFPVILGHEGAGIVEAVGEGVTSVKVGDHVIP 85 (368)
T ss_pred ecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC--CCCeeeccccEEEEEEECCCCccCCCCCEEEE
Confidence 3456679999999999999999999999999999999998876544 67899999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...||.|.+|..+.+++|.........|+..+|..++.. .|....++.+.|+|+||+.++++.++++|+++++++++
T Consensus 86 ~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~-~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa 164 (368)
T TIGR02818 86 LYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSK-DGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVC 164 (368)
T ss_pred cCCCCCCCChhhhCCCcccccCcccccccccccCCcccccc-CCCcccccccCccceeeEEechhheEECCCCCCHHHhh
Confidence 98899999999999999999864421112333332111110 01111122234699999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.|||+++....++++|++|||+|+|++|++++|+||++|+++|+++++++++++.++++|+++++++.+ .+.+
T Consensus 165 ~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~ 243 (368)
T TIGR02818 165 LLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND-YDKP 243 (368)
T ss_pred hhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-cchh
Confidence 999999999998777889999999999999999999999999999967999999999999999999999998653 1135
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+.+++++++++|++||++|++..+..+++++++++|+++.+|.........+....++.+..+.|+.........++.
T Consensus 244 ~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 323 (368)
T TIGR02818 244 IQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELP 323 (368)
T ss_pred HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHHHHH
Confidence 66778888877899999999987778999999977339999999743223344444444445567776544433356789
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
+++++++++++++.++++++|+|+++++|++.+.+++..|+++.+
T Consensus 324 ~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 324 GIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 999999999998888899999999999999999887767999875
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=7.1e-52 Score=393.48 Aligned_cols=351 Identities=36% Similarity=0.669 Sum_probs=292.5
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
.+.++++++|.|+|+++||+|||.+++||++|++.+.|.++. .+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~ 94 (371)
T cd08281 18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR---PLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFV 94 (371)
T ss_pred CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC---CCCccCCccceeEEEEeCCCCCcCCCCCEEEEccC
Confidence 356999999999999999999999999999999999887532 57889999999999999999999999999998888
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
..|+.|++|+.+.++.|.....-...|...+|..++...++... +..+.|+|+||+.+++++++++|+++++++++.++
T Consensus 95 ~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~-~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~ 173 (371)
T cd08281 95 PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEIN-HHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFG 173 (371)
T ss_pred CCCCCCccccCCCcccccCccccccccccccCcccccccCcccc-cccCcccceeeEEecccceEECCCCCChHHhhhhc
Confidence 89999999999999999765321111221221111111111110 11223699999999999999999999999999999
Q ss_pred cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
+++.|||+++....++++|++|||.|+|++|++++|+|+++|+++|++++++++|++.++++|+++++++.+ +++.+
T Consensus 174 ~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~ 250 (371)
T cd08281 174 CAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD---PNAVE 250 (371)
T ss_pred chHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHH
Confidence 999999998777888999999999999999999999999999966999999999999999999999999877 77888
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 324 (371)
.+++++++++|++|||+|....+..++++++++ |+++.+|.........++...++. ++++.|+....+...+++.++
T Consensus 251 ~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 329 (371)
T cd08281 251 QVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRY 329 (371)
T ss_pred HHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHH
Confidence 888888778999999999877789999999998 999999974332345666666655 899999876655445678999
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEE
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCI 364 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvv 364 (371)
++++++|++.+.++++++|+|+|+++||+.+.+++..|.+
T Consensus 330 ~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~v 369 (371)
T cd08281 330 LALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQV 369 (371)
T ss_pred HHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeee
Confidence 9999999998888899999999999999999988777443
No 8
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=1.2e-51 Score=391.58 Aligned_cols=360 Identities=51% Similarity=0.863 Sum_probs=294.9
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
..+++++++++.|.|+|.++||+|||+++++|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|++||+|++
T Consensus 9 ~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~--~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~ 86 (368)
T cd08300 9 WEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG--LFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86 (368)
T ss_pred ecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC--CCCceeccceeEEEEEeCCCCccCCCCCEEEE
Confidence 4456679999999999999999999999999999999998876544 68899999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+..+|++|++|..+.++.|.........|...+|..+++.. |....++.+.|+|+||+.++++.++++|+++++.+++
T Consensus 87 ~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~-g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa 165 (368)
T cd08300 87 LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCK-GKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVC 165 (368)
T ss_pred cCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccC-CcccccccccccceeEEEEchhceEeCCCCCChhhhh
Confidence 989999999999999999998654211123333331111111 1111122234699999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++ .+++
T Consensus 166 ~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~ 244 (368)
T cd08300 166 LLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD-HDKP 244 (368)
T ss_pred hhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc-cchH
Confidence 999999999998777788999999999999999999999999999967999999999999999999999998765 1125
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+.+.+++++++|+|||++|+...+..+++++++++|+++.+|.........++...+..+.++.++....+...+++.
T Consensus 245 ~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 324 (368)
T cd08300 245 IQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSRSQVP 324 (368)
T ss_pred HHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcHHHHH
Confidence 77888888877999999999987668999999977339999999743222334444444445677777666555567889
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
+++++++++++.+.++++++|+|+++++||+.+.+++..|++++
T Consensus 325 ~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 325 KLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 99999999999888888999999999999999988877798874
No 9
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.6e-51 Score=392.15 Aligned_cols=359 Identities=55% Similarity=0.963 Sum_probs=293.1
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.+++++.++++|.|+|.++||+|||++++||++|++.+.|.+.... .+|.++|||++|+|+++|++++.|++||+|++.
T Consensus 18 ~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~-~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~ 96 (381)
T PLN02740 18 GPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQR-AYPRILGHEAAGIVESVGEGVEDLKAGDHVIPI 96 (381)
T ss_pred cCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccC-CCCccccccceEEEEEeCCCCCcCCCCCEEEec
Confidence 3455688899999999999999999999999999999988754222 578999999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCC----CCCCccccccC-CceeecccCcccccceeeeecceeEECCCCCCc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMP----RDGTSRFRELK-GDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 158 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~----~~g~~~~~~~~-~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~ 158 (371)
+...|+.|++|..+.+++|..... .++. ..|...+...+ +....++...|+|+||+.++.+.++++|+++++
T Consensus 97 ~~~~cg~C~~c~~g~~~~C~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~ 173 (381)
T PLN02740 97 FNGECGDCRYCKRDKTNLCETYRV---DPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPL 173 (381)
T ss_pred CCCCCCCChhhcCCCcccccCccc---cccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCH
Confidence 999999999999999999987542 1110 00000000000 000011222469999999999999999999999
Q ss_pred chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457 159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC 238 (371)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 238 (371)
++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++
T Consensus 174 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~- 252 (381)
T PLN02740 174 KKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKD- 252 (381)
T ss_pred HHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-
Confidence 9999999999999998777889999999999999999999999999999966999999999999999999999998765
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCch
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPR 318 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 318 (371)
.+.++.+.+++++++++|++||++|+...+..+++++++++|+++.+|.........++...+++++++.|+....+...
T Consensus 253 ~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 332 (381)
T PLN02740 253 SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGK 332 (381)
T ss_pred ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcH
Confidence 11247778888887689999999998777899999998833999999975433234455444556889999877665545
Q ss_pred hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
.++.++++++.++++++.++++++|+|+|+++|++.+.+++..|++|+.
T Consensus 333 ~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 333 SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 6789999999999998888889999999999999999988777999863
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=7.6e-51 Score=384.70 Aligned_cols=346 Identities=33% Similarity=0.590 Sum_probs=290.7
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
+++.+++++++|.|+|+++||+|||.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 9 ~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~---~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~ 85 (358)
T TIGR03451 9 SKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND---EFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLN 85 (358)
T ss_pred cCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc---cCCcccccceEEEEEEeCCCCcccCCCCEEEEc
Confidence 45556899999999999999999999999999999999886532 578899999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMP-RDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
+...|+.|++|..+++++|...... ...+. .+|. ..+.....|+|+||+.++++.++++|+++++++++
T Consensus 86 ~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g~---------~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa 155 (358)
T TIGR03451 86 WRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDGT---------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAG 155 (358)
T ss_pred cCCCCCCChHHhCcCcccCcCcccc-ccccccccCc---------ccccccccccccceEEEehhheEECCCCCChhHhh
Confidence 9999999999999999999753210 00000 0010 00000123699999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++.+.+||+++....++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++.+ ++
T Consensus 156 ~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~ 232 (358)
T TIGR03451 156 LLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG---TD 232 (358)
T ss_pred hhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC---cC
Confidence 999999999988777788999999999999999999999999999966999999999999999999999999877 67
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 320 (371)
+.+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|........+++...++. +.++.++........++
T Consensus 233 ~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 311 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERD 311 (358)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHH
Confidence 88889888887 8999999999876689999999998 999999975333335566655555 78888886543334567
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
++++++++++|++.+.++++++|+|+++++|++.+.+++..|+++.
T Consensus 312 ~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 312 FPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred HHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 8999999999999888888999999999999999988877788765
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.5e-50 Score=380.14 Aligned_cols=333 Identities=28% Similarity=0.459 Sum_probs=284.2
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
+.+.+.++++++|.|+|+++||+||+.++++|++|++.+.+.+... ..+|.++|||++|+|+++|++++++++||+|++
T Consensus 6 ~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 84 (339)
T cd08239 6 FPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAP-AYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMV 84 (339)
T ss_pred EecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCcc-CCCCceeccCceEEEEEECCCCccCCCCCEEEE
Confidence 4455679999999999999999999999999999999887764322 146789999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...|++|++|..+++++|..... ..|...+| +|++|+.+++++++++|+++++++++
T Consensus 85 ~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G-------------------~~ae~~~v~~~~~~~~P~~~~~~~aa 143 (339)
T cd08239 85 YHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG-------------------GHAEYMLVPEKTLIPLPDDLSFADGA 143 (339)
T ss_pred CCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------------cceeEEEechHHeEECCCCCCHHHhh
Confidence 9999999999999999999976542 13333344 99999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.|||+++ ...++++|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++ .+
T Consensus 144 ~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~ 219 (339)
T cd08239 144 LLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ---DD 219 (339)
T ss_pred hhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc---ch
Confidence 9999999999976 5678899999999999999999999999999944999999999999999999999999876 45
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 321 (371)
.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.... .........+.+++++.|+.... .+++
T Consensus 220 -~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~ 293 (339)
T cd08239 220 -VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---VPDM 293 (339)
T ss_pred -HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---HHHH
Confidence 6677788877 8999999999988678899999998 99999997432 22222122233488999986543 4678
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
+++++++.+|++.+.++++++|+++++++||+.+.++..+|+++.+
T Consensus 294 ~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 294 EECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999999998888899999999999999999887766998864
No 12
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=2.2e-50 Score=383.13 Aligned_cols=358 Identities=56% Similarity=0.962 Sum_probs=295.4
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.+++.+++++++|.|+|+++||+|||.+++||++|++.+.|..+.. .+|.++|||++|+|+++|+++++|++||+|++
T Consensus 9 ~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~ 86 (369)
T cd08301 9 WEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTP--LFPRILGHEAAGIVESVGEGVTDLKPGDHVLP 86 (369)
T ss_pred ecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCC--CCCcccccccceEEEEeCCCCCccccCCEEEE
Confidence 4456679999999999999999999999999999999998876543 67899999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCC-CccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 161 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a 161 (371)
.+...|++|++|..+.++.|.........|....+ -.++. ..|....++...|+|+||+.++++.++++|++++++++
T Consensus 87 ~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 165 (369)
T cd08301 87 VFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFS-INGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKV 165 (369)
T ss_pred ccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccc-cCCcceeeeeccccceeEEEEecccEEECCCCCCHHHh
Confidence 99999999999999999999875421111211100 00000 00111122223468999999999999999999999999
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
+.+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|++.++++.+. +.
T Consensus 166 a~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~ 244 (369)
T cd08301 166 CLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDH-DK 244 (369)
T ss_pred hhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccccc-ch
Confidence 99999999999988888899999999999999999999999999998679999999999999999999999886541 12
Q ss_pred cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc-CCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE-GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 320 (371)
.+.+.+++++++++|++||++|+...+..+++++++ + |+++.+|........+++...+++++++.|+....+..+.+
T Consensus 245 ~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 323 (369)
T cd08301 245 PVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKPKTD 323 (369)
T ss_pred hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCChHHH
Confidence 466777777777899999999987768899999999 5 89999997543334555555556689999987766655567
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
++++++++.++++++.++++++|+|+++++||+.+.+++..|+++
T Consensus 324 ~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~ 368 (369)
T cd08301 324 LPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCIL 368 (369)
T ss_pred HHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEe
Confidence 899999999999888888889999999999999999988778886
No 13
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=8.8e-50 Score=379.33 Aligned_cols=357 Identities=52% Similarity=0.915 Sum_probs=286.7
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.+++.++++++|.|+|+++||+|||.++++|++|++.+.+.. .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 20 ~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~-----~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~ 94 (378)
T PLN02827 20 GAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA-----LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTV 94 (378)
T ss_pred cCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC-----CCCeeecccceEEEEEcCCCCcccCCCCEEEEe
Confidence 445568999999999999999999999999999999887642 467899999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
+...|+.|++|..+.++.|....... .|... ++...+. ..|....++...|+|+||+.++++.++++|+++++++++
T Consensus 95 ~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~~~~~~-~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa 172 (378)
T PLN02827 95 FTGECGSCRHCISGKSNMCQVLGLER-KGVMHSDQKTRFS-IKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKIC 172 (378)
T ss_pred cCCCCCCChhhhCcCcccccCccccc-cccccCCCccccc-ccCcccccccccccceeeEEechhheEECCCCCCHHHhh
Confidence 99999999999999999997643210 01000 0000000 000000001123699999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.++|++++...++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|+++++++++ .+++
T Consensus 173 ~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~ 251 (378)
T PLN02827 173 LLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPND-LSEP 251 (378)
T ss_pred hhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccc-cchH
Confidence 999899999987777788999999999999999999999999999966888888999999999999999998764 1135
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+.+++++++++|++||++|....+..+++.++++.|+++.+|..............+++++++.|+....+....++.
T Consensus 252 ~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 331 (378)
T PLN02827 252 IQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLP 331 (378)
T ss_pred HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHH
Confidence 77778888877899999999987668999999988339999999753322222212234458999998766554456788
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 368 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~ 368 (371)
++++++++|++.+.++++++|+|+++++|++.+.+++..|+||.+.
T Consensus 332 ~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~ 377 (378)
T PLN02827 332 SLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMP 377 (378)
T ss_pred HHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEec
Confidence 9999999999988778999999999999999999887779998874
No 14
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=1.8e-49 Score=376.16 Aligned_cols=356 Identities=53% Similarity=0.928 Sum_probs=293.2
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
...++.++++++|.|+|.++||+|||.++++|++|++.+.|..+ . .+|.++|||++|+|+++|++++++++||+|++
T Consensus 9 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~ 85 (365)
T cd08277 9 WEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-T--LFPVILGHEGAGIVESVGEGVTNLKPGDKVIP 85 (365)
T ss_pred ccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-C--CCCeecccceeEEEEeeCCCCccCCCCCEEEE
Confidence 34556689999999999999999999999999999999988654 2 67899999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...|++|.+|..+.++.|...... ..|+..++..++.. .|....++...|+|+||+.++.++++++|+++++++++
T Consensus 86 ~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa 163 (365)
T cd08277 86 LFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVC 163 (365)
T ss_pred CCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCcccccccccccceeeEEEchhheEECCCCCCHHHhh
Confidence 98999999999999999999875431 12332322111110 01111122234699999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.|||+++....++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|++++++..+ .+.+
T Consensus 164 ~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~ 242 (365)
T cd08277 164 LLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD-SDKP 242 (365)
T ss_pred HhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc-ccch
Confidence 999999999998777888999999999999999999999999999967999999999999999999999998765 1123
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+.+++++++++|++||++|+...+..++++++++.|+++.+|... +...+++...++.++++.|+..+.+....+++
T Consensus 243 ~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 321 (365)
T cd08277 243 VSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPP-GAELSIRPFQLILGRTWKGSFFGGFKSRSDVP 321 (365)
T ss_pred HHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCC-ccccccCHhHHhhCCEEEeeecCCCChHHHHH
Confidence 56777777777899999999987768999999977229999999743 22334555555558899998777665456789
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
+++++++++.+.+.++++++|+|+|+++|++.+.+++..|+++
T Consensus 322 ~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i 364 (365)
T cd08277 322 KLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVI 364 (365)
T ss_pred HHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEee
Confidence 9999999999888888999999999999999998887668876
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=1.5e-49 Score=373.63 Aligned_cols=332 Identities=20% Similarity=0.316 Sum_probs=270.3
Q ss_pred CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccc-cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
++.+.+.++++++|.| +.++||||||.+++||++|+++++ |........+|.++|||++|+|+++ ++++|++||+|
T Consensus 9 ~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV 85 (343)
T PRK09880 9 VVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTV 85 (343)
T ss_pred EEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEE
Confidence 3456667999999986 689999999999999999999875 4432221267899999999999999 68899999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
++.+...|++|++|..+.++.|..... +|..... ....|+|+||++++++.++++|+++++++
T Consensus 86 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P~~l~~~~ 148 (343)
T PRK09880 86 AINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYPEKADEKV 148 (343)
T ss_pred EECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECCCCCCHHH
Confidence 999999999999999999999987553 2321000 00125999999999999999999999977
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
++.. .++++||+++ ......+|++|||+|+|++|++++|+|+++|+++|+++++++++++.++++|+++++++++
T Consensus 149 aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--- 223 (343)
T PRK09880 149 MAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--- 223 (343)
T ss_pred HHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---
Confidence 6644 4788999976 4456678999999999999999999999999977999999999999999999999998876
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 319 (371)
.++.+ +.+. .+++|++||++|++..+..++++++++ |+++.+|.... ..+++...++. ++++.|+... .+
T Consensus 224 ~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~k~~~i~g~~~~----~~ 294 (343)
T PRK09880 224 DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGA--PPEFPMMTLIVKEISLKGSFRF----TE 294 (343)
T ss_pred ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CCccCHHHHHhCCcEEEEEeec----cc
Confidence 44433 2222 236999999999876689999999998 99999996432 24555555554 8899987532 35
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~~ 367 (371)
+++++++++++|++.+.++++++|+|+++++|++.+.++.. +|+++.+
T Consensus 295 ~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 295 EFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred cHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 78999999999999888888999999999999999988765 4998864
No 16
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.6e-48 Score=360.76 Aligned_cols=305 Identities=25% Similarity=0.348 Sum_probs=257.4
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.++++|+|.|.|.++||||||+|+++|+.|.+.++|...... .+|+++|.|++|+|+++|++|+.|++||+|+....
T Consensus 14 ~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~-~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~-- 90 (326)
T COG0604 14 VLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVR-PLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG-- 90 (326)
T ss_pred eeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCC-CCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccC--
Confidence 488999999999999999999999999999999999732221 69999999999999999999999999999977530
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.+ .+ |+|+||+.+|++.++++|+++|+++||+++++
T Consensus 91 -----------------------~~--~~-------------------G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~ 126 (326)
T COG0604 91 -----------------------VG--RD-------------------GGYAEYVVVPADWLVPLPDGLSFEEAAALPLA 126 (326)
T ss_pred -----------------------CC--CC-------------------CcceeEEEecHHHceeCCCCCCHHHHHHHHHH
Confidence 00 22 49999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
++|||+++....++++|++|||+|+ |++|++++||||++|+ +++++.+++++.++++++|+++++++++ .++.+.
T Consensus 127 ~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~ 202 (326)
T COG0604 127 GLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQ 202 (326)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHH
Confidence 9999999988899999999999986 9999999999999998 7777777888888999999999999988 789999
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC--C-chhhH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL--K-PRSDI 321 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~--~-~~~~~ 321 (371)
+++++++ ++|+|+|++|+.. +..++++++++ |+++.+|...+.....++...++. .++..|...... . ..+.+
T Consensus 203 v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 280 (326)
T COG0604 203 VRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEAL 280 (326)
T ss_pred HHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHH
Confidence 9999999 9999999999988 88899999998 999999985433445556555554 677777754433 1 23567
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC-c-eeeEEEEe
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-K-SLRCIIWM 367 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~-~-~~kvvv~~ 367 (371)
+++++++++|++.+ .++.+||+++..++....... + .+|+++.+
T Consensus 281 ~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 281 AELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred HHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 78999999996654 477899999965555544443 3 45999864
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=6e-48 Score=361.53 Aligned_cols=335 Identities=27% Similarity=0.397 Sum_probs=269.6
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCc-cccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-IFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
++....+++.+.|.+.+++|+|||.+++||++|++.+++..+.. ..|. ++|||++|+|+++| .++.+++||||++.
T Consensus 9 ~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~--~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~ 85 (350)
T COG1063 9 GGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFV--PPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVE 85 (350)
T ss_pred cCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCC--CCCCcccCccceEEEEEec-cccCCCCCCEEEEC
Confidence 33333466666667899999999999999999999999986655 4444 89999999999999 77889999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC-CCCCCcchhh
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI-TPHIPLGIAC 162 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~-P~~l~~~~aa 162 (371)
+...|++|.+|+.+.++.|....+ +|....+. + -.|+|+||+.+|.++.+++ |++++ .+++
T Consensus 86 ~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~~------------~--~~G~~aEyv~vp~~~~~~~~pd~~~-~~~a 147 (350)
T COG1063 86 PNIPCGHCRYCRAGEYNLCENPGF---YGYAGLGG------------G--IDGGFAEYVRVPADFNLAKLPDGID-EEAA 147 (350)
T ss_pred CCcCCCCChhHhCcCcccCCCccc---cccccccC------------C--CCCceEEEEEeccccCeecCCCCCC-hhhh
Confidence 999999999999999999994432 33222110 0 1149999999997665555 78885 4445
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK 241 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~ 241 (371)
++.-++.++|++........++.+|+|+|+|++|++++++|+.+|+.+|++++.+++|++.+++ .|++.+++..+ +
T Consensus 148 al~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~ 224 (350)
T COG1063 148 ALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---D 224 (350)
T ss_pred hhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---c
Confidence 5555999998863344455666699999999999999999999999999999999999999999 66776776655 3
Q ss_pred cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS 319 (371)
Q Consensus 242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 319 (371)
+....+.+++++ ++|++|+|+|...++..+++.++++ |+++.+|....... .++...+.. ++++.|+... ....
T Consensus 225 ~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~ 300 (350)
T COG1063 225 DAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP--SGRE 300 (350)
T ss_pred cHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC--CCcc
Confidence 677788889988 9999999999888899999999998 99999998543322 455555555 8999998321 1235
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~ 367 (371)
+++.+++++++|++++.+++++.++++++++|++.+.+... .|+++.+
T Consensus 301 ~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 301 DFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred cHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 79999999999999999999999999999999999988553 4888763
No 18
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.8e-47 Score=360.41 Aligned_cols=330 Identities=25% Similarity=0.417 Sum_probs=278.6
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
.++++.++++++|.|+|.++||+|||.++++|++|++.+.+.. +.. .+|.++|||++|+|+++|++++.+ +||+|+
T Consensus 5 ~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~ 81 (349)
T TIGR03201 5 TEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW-IGKAVI 81 (349)
T ss_pred ecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccC--CCCeeccccceEEEEEeCCCcCCC-CCCEEE
Confidence 3455568999999999999999999999999999998874433 222 578899999999999999999887 999999
Q ss_pred eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCC------C
Q 017457 82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP------H 155 (371)
Q Consensus 82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~------~ 155 (371)
+.+...|++|++|+.+.+++|..... .|...+| +|+||+.++++.++++|+ +
T Consensus 82 ~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 82 VPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG-------------------GFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred ECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC-------------------cccceEEechHHeEECCcccccccC
Confidence 99999999999999999999976543 3333334 999999999999999999 8
Q ss_pred CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235 (371)
Q Consensus 156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 235 (371)
+++++++.+++++.|||+++. ...+++|++|+|+|+|++|++++|+|+++|+ +|+++++++++++.++++|+++++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 999999999999999999764 5789999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCCCccHHHHHHHhhCC-CcC----EEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEE
Q 017457 236 ATCGDKTVSQVIKEMTDG-GAD----YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG 309 (371)
Q Consensus 236 ~~~~~~~~~~~i~~~~~g-g~d----~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g 309 (371)
.+.+.+++.+.+++++++ ++| ++|||+|+...++.++++++++ |+++.+|.... ...++...++. +.++.|
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g 294 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMA--KTEYRLSNLMAFHARALG 294 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCC--CcccCHHHHhhcccEEEE
Confidence 652223567778888877 886 8999999988788899999998 99999997532 23455555554 678888
Q ss_pred eeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 310 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
++... ..+++++++++.+|++++.+++ +.|+|+++++||+.+.+++.. |++++
T Consensus 295 ~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~ 348 (349)
T TIGR03201 295 NWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILT 348 (349)
T ss_pred EecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEec
Confidence 75322 4578999999999999877777 579999999999999988765 88775
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.9e-47 Score=361.16 Aligned_cols=329 Identities=21% Similarity=0.340 Sum_probs=268.8
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
+.+..+++.+++.|+|+++||+|||.+++||++|++.+.|.++.. .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 20 ~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~ 97 (360)
T PLN02586 20 DPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFT--RYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVG 97 (360)
T ss_pred CCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCC--CCCccCCcceeEEEEEECCCCCccCCCCEEEEc
Confidence 334568888899999999999999999999999999998876433 578999999999999999999999999999865
Q ss_pred cC-CCCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457 84 FH-RDCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 158 (371)
Q Consensus 84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~ 158 (371)
+. ..|+.|++|+.+.+++|+....... .|...+ |+|+||++++++.++++|+++++
T Consensus 98 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ls~ 158 (360)
T PLN02586 98 VIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNY-------------------GGYSDMIVVDQHFVLRFPDNLPL 158 (360)
T ss_pred cccCcCCCCccccCCCcccCCCccccccccccCCCcCC-------------------CccceEEEEchHHeeeCCCCCCH
Confidence 54 5799999999999999986542100 012222 49999999999999999999999
Q ss_pred chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-HHHHHhCcceEEcCCC
Q 017457 159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-EIGKKFGITDFINPAT 237 (371)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~~~~~lga~~v~~~~~ 237 (371)
++++.+++.+.|||+++.....+++|++|||.|+|++|++++|+||++|+ +|++++.+++++ +.++++|+++++++.+
T Consensus 159 ~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~ 237 (360)
T PLN02586 159 DAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD 237 (360)
T ss_pred HHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC
Confidence 99999999999999977655667899999999999999999999999999 788877666654 4567899999998654
Q ss_pred CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC
Q 017457 238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK 316 (371)
Q Consensus 238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~ 316 (371)
. +.+++.++ ++|++||++|....++.++++++++ |+++.+|... ....++...++. +..+.|+....
T Consensus 238 ---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~-- 305 (360)
T PLN02586 238 ---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPE--KPLELPIFPLVLGRKLVGGSDIGG-- 305 (360)
T ss_pred ---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCC--CCCccCHHHHHhCCeEEEEcCcCC--
Confidence 2 24555554 7999999999876689999999998 9999999643 234555555554 66777765432
Q ss_pred chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 370 (371)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~ 370 (371)
..+++++++++++|++++. + ++|+|+|+++||+.+.+++.. |+++.+..+
T Consensus 306 -~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 356 (360)
T PLN02586 306 -IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDVANS 356 (360)
T ss_pred -HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence 4578999999999988753 4 689999999999999988764 999987543
No 20
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=9.7e-48 Score=366.09 Aligned_cols=339 Identities=24% Similarity=0.362 Sum_probs=266.3
Q ss_pred cCCCCcEEEEEecCCCC-------CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCC
Q 017457 4 IPGKPLVIEEIEVEPPK-------AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKE 76 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~-------~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~ 76 (371)
...++++++++|.|+|+ +|||||||++++||++|++.+.|.++ . .+|.++|||++|+|+++|++|++|++
T Consensus 9 ~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~--~~p~i~GhE~~G~V~~vG~~V~~~~v 85 (393)
T TIGR02819 9 LGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-A--PTGLVLGHEITGEVIEKGRDVEFIKI 85 (393)
T ss_pred ecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-C--CCCccccceeEEEEEEEcCccccccC
Confidence 34446899999999874 68999999999999999999988653 2 57899999999999999999999999
Q ss_pred CCEEeeccCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEE
Q 017457 77 RDLVLPIFHRDCGECRDCKSSKSNTCSKFGRG---YRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVK 151 (371)
Q Consensus 77 Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~ 151 (371)
||||++.+...|+.|++|++++++.|...... ..+|+...| . -.|+|+||+.+++. .+++
T Consensus 86 GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-----~----------~~G~~aey~~v~~~~~~l~~ 150 (393)
T TIGR02819 86 GDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-----G----------WVGGQSEYVMVPYADFNLLK 150 (393)
T ss_pred CCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC-----C----------CCCceEEEEEechhhCceEE
Confidence 99999999999999999999999999864310 001211000 0 02599999999964 7999
Q ss_pred CCCCCCc----chhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457 152 ITPHIPL----GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 227 (371)
Q Consensus 152 ~P~~l~~----~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l 227 (371)
+|++++. .+++.+.+++.+||+++ ...++++|++|||.|+|++|++++|+|+++|++.|++++++++|++.++++
T Consensus 151 vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~ 229 (393)
T TIGR02819 151 FPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSF 229 (393)
T ss_pred CCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHc
Confidence 9998754 34667777899999975 457899999999988899999999999999995566677888999999999
Q ss_pred CcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh--------------HHHHHHHHHhhcCCceEEEECccCCCC
Q 017457 228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLT--------------SVMNDAFNSSREGWGKTVILGVEMHGS 292 (371)
Q Consensus 228 ga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~--------------~~~~~~~~~l~~~~G~~v~~g~~~~~~ 292 (371)
|++.+...++ .++.+.+.+++++ ++|++||++|.+ .+++.+++.++++ |+++.+|......
T Consensus 230 Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~~~~~ 305 (393)
T TIGR02819 230 GCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLYVTED 305 (393)
T ss_pred CCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeecCCcc
Confidence 9975443333 4677778888877 899999999985 3599999999998 9999999752211
Q ss_pred c-----------eecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCcee-EEEecccHHHHHHHHhcCc
Q 017457 293 P-----------ISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGK 359 (371)
Q Consensus 293 ~-----------~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~ 359 (371)
. .++....+.. ++++.+.. ....+.+.++++++++|++++.++++ ++|+|+++++||+.+.++.
T Consensus 306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~ 382 (393)
T TIGR02819 306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA 382 (393)
T ss_pred cccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC
Confidence 1 1222233323 45666532 11122346899999999999887776 7899999999999998887
Q ss_pred eeeEEEEeC
Q 017457 360 SLRCIIWMD 368 (371)
Q Consensus 360 ~~kvvv~~~ 368 (371)
..|+++.+.
T Consensus 383 ~~Kvvi~~~ 391 (393)
T TIGR02819 383 AKKFVIDPH 391 (393)
T ss_pred ceEEEEeCC
Confidence 779999874
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=3.3e-47 Score=360.70 Aligned_cols=329 Identities=23% Similarity=0.331 Sum_probs=270.1
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.++..++..+++.|+|+++||+|||.+++||++|++.+.|.+... .+|.++|||++|+|+++|+++++|++||+|++.
T Consensus 14 ~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~--~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~ 91 (375)
T PLN02178 14 DESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVG 91 (375)
T ss_pred cCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCC--CCCcccCceeeEEEEEECCCCCccCCCCEEEEc
Confidence 344568888899999999999999999999999999998876433 568899999999999999999999999999876
Q ss_pred cCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc
Q 017457 84 FHR-DCGECRDCKSSKSNTCSKFGRGYR----PNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL 158 (371)
Q Consensus 84 ~~~-~~~~c~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~ 158 (371)
+.. .|++|.+|+.+.+++|........ .|...+ |+|+||+.++++.++++|+++++
T Consensus 92 ~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~-------------------G~~aey~~v~~~~~~~lP~~ls~ 152 (375)
T PLN02178 92 VIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ-------------------GGYSDVIVVDHRFVLSIPDGLPS 152 (375)
T ss_pred CccCCCCCChhHhCcchhcCCCccccccccccCCCcCC-------------------CccccEEEEchHHeEECCCCCCH
Confidence 655 699999999999999987542100 011112 49999999999999999999999
Q ss_pred chhhccccchhhhHHHHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHhCcceEEcCC
Q 017457 159 GIACLLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDFINPA 236 (371)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~v~~~~ 236 (371)
++++.+++.+.|||+++..... .++|++|+|.|+|++|++++|+|+++|+ +|+++++++++ .+.++++|+++++++.
T Consensus 153 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~ 231 (375)
T PLN02178 153 DSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTT 231 (375)
T ss_pred HHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCc
Confidence 9999999999999987644332 3689999999999999999999999999 78888876554 6778899999999865
Q ss_pred CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCC
Q 017457 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGL 315 (371)
Q Consensus 237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~ 315 (371)
+ . +.+.+.++ ++|++||++|....+..++++++++ |+++.+|... ....++...++. ++++.|+....
T Consensus 232 ~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~- 300 (375)
T PLN02178 232 D---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG- 300 (375)
T ss_pred C---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCC--CCCccCHHHHHhCCeEEEEeCccC-
Confidence 4 2 34555554 7999999999886689999999998 9999999743 234555555544 88899886443
Q ss_pred CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCcC
Q 017457 316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDKL 370 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~~ 370 (371)
.+++.++++++++|++++. + ++|||+++++|++.+.+++.. |+++.+.++
T Consensus 301 --~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~~~ 351 (375)
T PLN02178 301 --MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDVANS 351 (375)
T ss_pred --HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEeccc
Confidence 4678999999999988754 4 679999999999999988764 999988653
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2e-46 Score=353.19 Aligned_cols=332 Identities=22% Similarity=0.337 Sum_probs=272.2
Q ss_pred cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.+...+++++.|.|+| .++||+|||.++++|++|++.+..... . .+|.++|||++|+|+++|+++++|++||+|++
T Consensus 7 ~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~--~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~ 83 (347)
T PRK10309 7 DTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-H--YYPITLGHEFSGYVEAVGSGVDDLHPGDAVAC 83 (347)
T ss_pred eCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-C--CCCcccccceEEEEEEeCCCCCCCCCCCEEEE
Confidence 3344589999999987 599999999999999999875322111 1 46789999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...|+.|++|..+.++.|..... .|...+ |+|++|+.++++.++++|+++++++++
T Consensus 84 ~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~lP~~~s~~~aa 141 (347)
T PRK10309 84 VPLLPCFTCPECLRGFYSLCAKYDF---IGSRRD-------------------GGNAEYIVVKRKNLFALPTDMPIEDGA 141 (347)
T ss_pred CCCcCCCCCcchhCcCcccCCCcce---eccCCC-------------------CccceeEEeehHHeEECcCCCCHHHhh
Confidence 9999999999999999999976432 333333 499999999999999999999999998
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+. .+.+++++ .....+++|++|||+|+|++|++++|+|+++|++.|+++++++++++.++++|+++++++++ .+
T Consensus 142 ~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~ 216 (347)
T PRK10309 142 FIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE---MS 216 (347)
T ss_pred hhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc---cC
Confidence 875 45667775 46678899999999999999999999999999955889999999999999999999998776 44
Q ss_pred HHHHHHHhhCC-CcC-EEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceec-CHHHHh-cCceEEEeeccCCC--
Q 017457 243 VSQVIKEMTDG-GAD-YCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISL-NSIEIL-KGRSVCGTYFGGLK-- 316 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d-~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~-~~~~~~-~~~~~~g~~~~~~~-- 316 (371)
.+.+.+++.+ ++| ++|||+|+...+..++++++++ |+++.+|.......... +...++ +++++.|+......
T Consensus 217 -~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 294 (347)
T PRK10309 217 -APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPW 294 (347)
T ss_pred -HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCc
Confidence 4567777766 888 9999999887689999999998 99999997543211111 122344 47899998654221
Q ss_pred chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
..++++++++++++|++.+.++++++|+|+++++|++.+.+++.. |+++.+
T Consensus 295 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 295 PGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred chhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 246788999999999998888899999999999999999887754 999875
No 23
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=7.5e-46 Score=352.05 Aligned_cols=359 Identities=47% Similarity=0.771 Sum_probs=289.8
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.++++.+++++.|.|+|.++||+|||.++++|++|++.+.|.+. . .+|.++|||++|+|+++|++++.+++||+|++
T Consensus 14 ~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 90 (373)
T cd08299 14 WEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-T--PFPVILGHEAAGIVESVGEGVTTVKPGDKVIP 90 (373)
T ss_pred ecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-C--CCCccccccceEEEEEeCCCCccCCCCCEEEE
Confidence 45566789999999999999999999999999999999988762 2 57889999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+..+|++|.+|..+.++.|.......-.|...+++.++..+ |...+++...|+|++|+++++++++++|+++++++++
T Consensus 91 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa 169 (373)
T cd08299 91 LFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCK-GKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVC 169 (373)
T ss_pred CCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccC-CcccccccCCCcccceEEecccceeeCCCCCChHHhh
Confidence 988999999999999999998754311012222221111111 1222334345799999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.+||+++....++++|++|||+|+|++|++++++|+++|+++|+++++++++++.++++|++++++..+ ...+
T Consensus 170 ~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~ 248 (373)
T cd08299 170 LIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD-YKKP 248 (373)
T ss_pred eeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc-cchh
Confidence 999999999998778889999999999988999999999999999867999999999999999999999998764 1123
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHh-hcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSS-REGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 321 (371)
+.+.+.+++++++|+++|++|++..+..++..+ +++ |+++.+|........+++...+..+.++.++....+....++
T Consensus 249 ~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 327 (373)
T cd08299 249 IQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKSKDSV 327 (373)
T ss_pred HHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCccHHHH
Confidence 667777777778999999999866577766655 566 999999974332345555544455788998877766555667
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
.++++.+.++.+.+.+++++.|+++++++|++.+.+++..|+++.+
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 328 PKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 7888888888777776788999999999999999887767888764
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.8e-46 Score=350.42 Aligned_cols=313 Identities=19% Similarity=0.257 Sum_probs=265.5
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC-
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH- 85 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~- 85 (371)
..++++++|.|+|+++||+|||.++++|++|.+.+.|.++.. .+|.++|||++|+|+++|+.+++|++||+|++.+.
T Consensus 13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 90 (329)
T TIGR02822 13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH--RPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLR 90 (329)
T ss_pred CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC--CCCccCCcceEEEEEEECCCCcccCCCCEEEEcCcc
Confidence 358999999999999999999999999999999998876533 45789999999999999999999999999987654
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
..|+.|++|..+.+++|..... .|+..+| +|+||+.++++.++++|+++++++++.++
T Consensus 91 ~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~lP~~~~~~~aa~l~ 148 (329)
T TIGR02822 91 RTCGVCRYCRRGAENLCPASRY---TGWDTDG-------------------GYAEYTTVPAAFAYRLPTGYDDVELAPLL 148 (329)
T ss_pred CcCCCChHHhCcCcccCCCccc---CCcccCC-------------------cceeEEEeccccEEECCCCCCHHHhHHHh
Confidence 4699999999999999987653 4443344 99999999999999999999999999999
Q ss_pred cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
+.+.|||+++ ...++++|++|||+|+|++|++++|+|+++|+ +|++++++++|++.++++|+++++++.+ ..
T Consensus 149 ~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~--- 220 (329)
T TIGR02822 149 CAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP--- 220 (329)
T ss_pred ccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC---
Confidence 9999999976 46889999999999999999999999999999 8999999999999999999999987543 11
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 324 (371)
.+++|+++++.+....+..++++++++ |+++.+|..... ...++...++. ++++.++... .++++.++
T Consensus 221 ------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~---~~~~~~~~ 289 (329)
T TIGR02822 221 ------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSN---TRADAREF 289 (329)
T ss_pred ------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecC---CHHHHHHH
Confidence 126899998888777799999999998 999999974222 22345444444 7888887533 24678889
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
+++++++++. +++++|+|+|+++|++.+.+++.. |+++
T Consensus 290 ~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 290 LELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 9999999875 357999999999999999988765 8876
No 25
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=6.1e-46 Score=351.81 Aligned_cols=342 Identities=25% Similarity=0.414 Sum_probs=282.9
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC------cCCC
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE------VKER 77 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~------~~~G 77 (371)
++++.+++++.+.|+|+++||+|||.++++|++|++...|.++.. .+|.++|||++|+|+++|++++. |++|
T Consensus 8 ~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~G 85 (361)
T cd08231 8 GPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRV--PLPIILGHEGVGRVVALGGGVTTDVAGEPLKVG 85 (361)
T ss_pred CCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCC--CCCcccccCCceEEEEeCCCccccccCCccCCC
Confidence 445579999999999999999999999999999999998876533 67889999999999999999986 9999
Q ss_pred CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccCCceeecccCcccccceeeeecc-eeEECCCC
Q 017457 78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRD-GTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPH 155 (371)
Q Consensus 78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~-g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~P~~ 155 (371)
|+|++.+...|++|.+|+.+++++|..... .|...+ +. ....|+|++|+.++++ .++++|++
T Consensus 86 d~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~~~-------------~~~~g~~a~~~~v~~~~~~~~lP~~ 149 (361)
T cd08231 86 DRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASCDD-------------PHLSGGYAEHIYLPPGTAIVRVPDN 149 (361)
T ss_pred CEEEEcccCCCCCChhHhCcCccccccchh---ccccccccC-------------CCCCcccceEEEecCCCceEECCCC
Confidence 999999999999999999999999987653 332211 00 0012599999999986 79999999
Q ss_pred CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235 (371)
Q Consensus 156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 235 (371)
++..+++.++++++|||+++......++|++|||+|+|++|++++++|+++|+++|+++++++++.++++++|++.++++
T Consensus 150 ~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 229 (361)
T cd08231 150 VPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDI 229 (361)
T ss_pred CCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcC
Confidence 99999999989999999987666666799999999989999999999999999789999999999999999999999887
Q ss_pred CCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeecc
Q 017457 236 ATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFG 313 (371)
Q Consensus 236 ~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~ 313 (371)
+.....++...+.+++++ ++|++||++|+...+..++++++++ |+++.+|.........++...++. +.++.++...
T Consensus 230 ~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (361)
T cd08231 230 DELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNY 308 (361)
T ss_pred cccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEcccC
Confidence 651112233567888877 9999999999866689999999998 999999975433334455444444 8888887643
Q ss_pred CCCchhhHHHHHHHHHcC--CCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 314 GLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
+ .++++++++++.++ .+.+.++++++|+++++++||+.+.++...|++|.+
T Consensus 309 ~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 309 D---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred C---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 3 45788899999988 566777788999999999999999887767998853
No 26
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=7.7e-46 Score=350.21 Aligned_cols=326 Identities=20% Similarity=0.307 Sum_probs=255.5
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCC-CCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
.+++++++|.|+|+++||||||+|++||++|++.++|.++..+ ..+|.++|||++|+|+++|++ ++|++||+|++.+.
T Consensus 11 ~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~ 89 (355)
T cd08230 11 PGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVR 89 (355)
T ss_pred CCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccc
Confidence 3489999999999999999999999999999999998754321 146889999999999999999 99999999999988
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
..|+.|.+|+.+.+++|...... ..|... ..|+|+||+.++++.++++|++++ + ++.+.
T Consensus 90 ~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~ 148 (355)
T cd08230 90 RPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPSLA-D-VGVLL 148 (355)
T ss_pred cCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCCCC-c-ceeec
Confidence 89999999999999999754320 012110 125999999999999999999999 3 34444
Q ss_pred cchhhhHHHHHH------HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEEcCC
Q 017457 166 CGVSTGVGAAWK------VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFINPA 236 (371)
Q Consensus 166 ~~~~ta~~~l~~------~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~~~ 236 (371)
.++.++++++.. ....++|++|||+|+|++|++++|+||++|+ +|+++++ +++|++.++++|++. +++.
T Consensus 149 ~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~ 226 (355)
T cd08230 149 EPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSS 226 (355)
T ss_pred chHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCC
Confidence 465555543221 2236789999999999999999999999999 8999987 688999999999987 4555
Q ss_pred CCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC----HHHHh-cCceEEEee
Q 017457 237 TCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN----SIEIL-KGRSVCGTY 311 (371)
Q Consensus 237 ~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~----~~~~~-~~~~~~g~~ 311 (371)
+ +++.+ . . ..+++|+|||++|++..+..+++.++++ |+++.+|........+++ ...++ +++++.|+.
T Consensus 227 ~---~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~ 299 (355)
T cd08230 227 K---TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSV 299 (355)
T ss_pred c---cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEec
Confidence 4 34433 1 1 2238999999999876689999999998 999999975432333444 22333 488999975
Q ss_pred ccCCCchhhHHHHHHHHHcCCC----CCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 312 FGGLKPRSDIATLAQKYLDKEL----NLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
... .++++++++++.++.+ .+.++++++|+++++++||+.+.++. .|+++.+
T Consensus 300 ~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 300 NAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred CCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 333 4578899999998862 25567889999999999999886543 5998864
No 27
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.3e-45 Score=346.20 Aligned_cols=355 Identities=46% Similarity=0.815 Sum_probs=295.0
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.++++++++++.+.|++.+++|+||+.++++|++|++...+.+.. .+|.++|||++|+|+++|++++++++||+|++
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~---~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~ 83 (365)
T cd05279 7 WEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT---PLPVILGHEGAGIVESIGPGVTTLKPGDKVIP 83 (365)
T ss_pred ecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC---CCCcccccceeEEEEEeCCCcccCCCCCEEEE
Confidence 345657999999999999999999999999999999998887542 46789999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...|++|.+|..+.+++|.........|...+|..++.. +|.-.+|+.+.|+|++|+.++++.++++|+++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~ 162 (365)
T cd05279 84 LFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVC 162 (365)
T ss_pred cCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCccccccccccccceEEecCCceEECCCCCCHHHhh
Confidence 98899999999999999999876532222322223222111 22223344455799999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc-
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK- 241 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~- 241 (371)
.+++++.+||+++....++++|++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|++++++.++ .
T Consensus 163 ~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~ 239 (365)
T cd05279 163 LIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD---QD 239 (365)
T ss_pred HhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc---cc
Confidence 999999999998878889999999999988999999999999999966888888999999999999999998766 4
Q ss_pred -cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhh-cCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457 242 -TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSR-EGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 242 -~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (371)
++.+.+.+++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|+....+...+
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 67777888876699999999987666899999999 97 9999998643234566776666457788888766665567
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
.+.+++++++++.+.+.++.+++|+++++++|++.+.+++..|++|
T Consensus 319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 8899999999998877666779999999999999998877667776
No 28
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.7e-46 Score=315.82 Aligned_cols=306 Identities=25% Similarity=0.275 Sum_probs=261.5
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.+...+++++.|.|+|+++|++||-.|+|+|..|..+++|.+... +.|++||-|.+|+|+++|++|+++++||+|...
T Consensus 18 Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~--plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl 95 (336)
T KOG1197|consen 18 GGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPA--PLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYL 95 (336)
T ss_pred CCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCC--CCCcCCCcccceEEEEecCCccccccccEEEEe
Confidence 345568999999999999999999999999999999999999755 799999999999999999999999999999653
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
.. .|.|+|++.+|...++++|+.+++.+||+
T Consensus 96 ~~-------------------------------------------------~g~yaee~~vP~~kv~~vpe~i~~k~aaa 126 (336)
T KOG1197|consen 96 NP-------------------------------------------------FGAYAEEVTVPSVKVFKVPEAITLKEAAA 126 (336)
T ss_pred cc-------------------------------------------------chhhheeccccceeeccCCcccCHHHHHH
Confidence 21 25999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
+.+.++|||..+.+...+++|++||++.+ |++|+++.|++++.|+ ++|++.++++|.+.+++.|+.|.++++. ++
T Consensus 127 ~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD 202 (336)
T KOG1197|consen 127 LLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---ED 202 (336)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hh
Confidence 99999999998888889999999999976 9999999999999999 9999999999999999999999999999 99
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCC-chh
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLK-PRS 319 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~-~~~ 319 (371)
+.+++.+.|+| |+|+++|++|... +...+.+|++. |.++.||..+ +..-+++...+.- .+++..-.+..+- ...
T Consensus 203 ~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~mVSfG~as-gl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~ 279 (336)
T KOG1197|consen 203 YVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKMVSFGNAS-GLIDPIPLNQLSPKALQLVRPSLLGYIDGEV 279 (336)
T ss_pred HHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceEEEecccc-CCCCCeehhhcChhhhhhccHhhhcccCCHH
Confidence 99999999988 9999999999988 99999999998 9999999743 3333333333222 3333332222222 122
Q ss_pred ----hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 320 ----DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 320 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
...+++.++.+|.+.+. |++.|||+++.+|+.++++.... |+++...+
T Consensus 280 el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~~ 332 (336)
T KOG1197|consen 280 ELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPGP 332 (336)
T ss_pred HHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCCc
Confidence 23578888889976655 89999999999999999997665 98887643
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=6e-45 Score=344.01 Aligned_cols=333 Identities=23% Similarity=0.340 Sum_probs=270.3
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
..++..+++++++.|+|+++||+|||.++++|++|++.+.|.+... .+|.++|||++|+|+++|+.+++|++||+|++
T Consensus 16 ~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~--~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~ 93 (357)
T PLN02514 16 RDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS--NYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGV 93 (357)
T ss_pred ecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC--CCCccCCceeeEEEEEECCCcccccCCCEEEE
Confidence 4567779999999999999999999999999999999998876443 57889999999999999999999999999986
Q ss_pred ccCC-CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchh
Q 017457 83 IFHR-DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIA 161 (371)
Q Consensus 83 ~~~~-~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~a 161 (371)
.+.. .|++|.+|..+.++.|.........++ ..| ....|+|+||+.++.+.++++|++++++++
T Consensus 94 ~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g--------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 158 (357)
T PLN02514 94 GVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDG--------------KPTQGGFASAMVVDQKFVVKIPEGMAPEQA 158 (357)
T ss_pred cCccccCCCChhHhCCCcccCCCccccccccc-cCC--------------ccCCCccccEEEEchHHeEECCCCCCHHHh
Confidence 6544 699999999999999976532100000 001 011259999999999999999999999999
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCC
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGD 240 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~ 240 (371)
+.+++++.|||+++......++|++|+|+|+|++|++++|+||++|+ +|+++++++++++.+ +++|+++++++.+
T Consensus 159 a~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--- 234 (357)
T PLN02514 159 APLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD--- 234 (357)
T ss_pred hhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC---
Confidence 99999999999987655556899999999889999999999999999 788888787776654 5699988876544
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 319 (371)
. ..+.+.+. ++|++||++|....++.++++++++ |+++.+|.... ..+++...++. ++++.|+.... ..
T Consensus 235 ~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~g~~~~~---~~ 304 (357)
T PLN02514 235 A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINT--PLQFVTPMLMLGRKVITGSFIGS---MK 304 (357)
T ss_pred h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCC--CCcccHHHHhhCCcEEEEEecCC---HH
Confidence 2 23444443 7999999999776689999999998 99999997532 23455555544 88999986543 45
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
+++++++++++|++. +++ ++|+|+++++||+.+.+++.. |+++.++.
T Consensus 305 ~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 305 ETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred HHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 789999999999754 445 689999999999999988775 99998754
No 30
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.1e-44 Score=341.92 Aligned_cols=329 Identities=27% Similarity=0.471 Sum_probs=279.0
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC-CC--------CCCCCccccccccEEEEEeCCCCCCc
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD-LP--------KLPLPVIFGHEAVGVVESVGEYVEEV 74 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~-~~--------~~~~p~~~G~e~~G~Vv~vG~~v~~~ 74 (371)
...++++++++|.|+|.++||+||+.++++|++|++.+.+... .. ...+|.++|||++|+|+++|+++++|
T Consensus 7 ~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~ 86 (351)
T cd08233 7 HGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGF 86 (351)
T ss_pred ecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCC
Confidence 3345699999999999999999999999999999887654211 00 01368899999999999999999999
Q ss_pred CCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECC
Q 017457 75 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 153 (371)
Q Consensus 75 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P 153 (371)
++||+|++.+...|++|.+|..+.+++|..... .|+.. . |+|++|+.++.+.++++|
T Consensus 87 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~a~~~~~~~~~~~~lP 144 (351)
T cd08233 87 KVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGG-------------------GGFAEYVVVPAYHVHKLP 144 (351)
T ss_pred CCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCC-------------------CceeeEEEechHHeEECc
Confidence 999999999989999999999999999976542 22221 2 499999999999999999
Q ss_pred CCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457 154 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 233 (371)
Q Consensus 154 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 233 (371)
+++++++++.+ .++.|||+++ ...++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++
T Consensus 145 ~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i 222 (351)
T cd08233 145 DNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVL 222 (351)
T ss_pred CCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999998876 5788999976 778899999999999999999999999999997799999999999999999999999
Q ss_pred cCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEee
Q 017457 234 NPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTY 311 (371)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~ 311 (371)
++++ .++.+.+++++++ ++|++||++|....+..++++++++ |+++.+|... ....++...++. ++++.|..
T Consensus 223 ~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~g~~ 296 (351)
T cd08233 223 DPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWE--KPISFNPNDLVLKEKTLTGSI 296 (351)
T ss_pred CCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCC--CCCccCHHHHHhhCcEEEEEe
Confidence 9887 7888889888887 7999999999766689999999998 9999999754 234556555554 78999875
Q ss_pred ccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccH-HHHHHHHhcCce--eeEEE
Q 017457 312 FGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDI-NKAFDLLLEGKS--LRCII 365 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~a~~~~~~~~~--~kvvv 365 (371)
... .+++++++++++++++.+.++++++|+++|+ ++|++.+.+++. +|++|
T Consensus 297 ~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 297 CYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred ccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 432 3679999999999998877778899999996 799999988774 58886
No 31
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=6.1e-43 Score=331.48 Aligned_cols=352 Identities=32% Similarity=0.613 Sum_probs=283.4
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
+..+++++.+.|++.++||+|||.++++|++|++...|.++ . .+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 12 ~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~--~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 88 (365)
T cd08278 12 GGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-T--PLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA 88 (365)
T ss_pred CCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-C--CCCcccccceeEEEEEeCCCcccCCCCCEEEEccc
Confidence 45688999999999999999999999999999999988764 2 46789999999999999999999999999998764
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceee-cccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH-HFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~-~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
.|+.|.+|..+.+++|.........|...+|-..+.+++|...+ ++...|+|++|+.+++++++++|+++++++++.+
T Consensus 89 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l 167 (365)
T cd08278 89 -SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPL 167 (365)
T ss_pred -CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhh
Confidence 89999999999999997543210012111110000000000000 1223469999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
++++.||++++.....++++++|||+|+|++|++++|+|+++|+.+|+++++++++.+.++++|++.++++++ .++.
T Consensus 168 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~ 244 (365)
T cd08278 168 GCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE---EDLV 244 (365)
T ss_pred cchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHH
Confidence 9999999998877888999999999988999999999999999977999999999999999999999998876 6788
Q ss_pred HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHHH
Q 017457 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIAT 323 (371)
Q Consensus 245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~ 323 (371)
+.+.+++++++|+++||+|+...+..++++++++ |+++.+|.........++...+ ..+.++.++........+.+++
T Consensus 245 ~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (365)
T cd08278 245 AAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPR 323 (365)
T ss_pred HHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHH
Confidence 8888888449999999999766689999999998 9999999643233445666665 4488888876544333456788
Q ss_pred HHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 324 LAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
+++++.++++.+..++ ..|+++++++|++.+.+++..|++++
T Consensus 324 ~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 324 LIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred HHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 9999999987543445 68999999999999988877788863
No 32
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=4e-44 Score=336.33 Aligned_cols=317 Identities=20% Similarity=0.249 Sum_probs=246.2
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCC--CCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP--KLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~--~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
+.+.++++++++|.|+ +++||||||++++||++|+++++|.+... ...+|.++|||++|+|+++|.. .|++||+|
T Consensus 8 ~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV 84 (341)
T cd08237 8 LVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKV 84 (341)
T ss_pred EeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEE
Confidence 3445569999999985 99999999999999999999999875321 1257999999999999998875 69999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
++.+...|+ |..| +..++|..... .|...+ |+|+||+++++++++++|+++++++
T Consensus 85 ~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~-------------------G~~aey~~v~~~~~~~vP~~l~~~~ 139 (341)
T cd08237 85 VMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYD-------------------GFMQDYVFLPPDRLVKLPDNVDPEV 139 (341)
T ss_pred EECCCCCch-hccc--chhccCCCcce---eEecCC-------------------CceEEEEEEchHHeEECCCCCChHH
Confidence 998887787 4455 45678865442 233333 3999999999999999999999998
Q ss_pred hhccccchhhhHHHHHH--HcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457 161 ACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPAT 237 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~--~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 237 (371)
|+.+. +++++++++.. ...+++|++|||+|+|++|++++|+|+. +|..+|++++++++|++.++++++++.++
T Consensus 140 aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--- 215 (341)
T cd08237 140 AAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--- 215 (341)
T ss_pred hhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh---
Confidence 87655 88889987643 2456889999999999999999999986 66558999999999999998766653321
Q ss_pred CCCccHHHHHHHhhCC-CcCEEEECCCC---hHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeec
Q 017457 238 CGDKTVSQVIKEMTDG-GADYCFECIGL---TSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYF 312 (371)
Q Consensus 238 ~~~~~~~~~i~~~~~g-g~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~ 312 (371)
+ +... ++|+|||++|+ +..++.+++.++++ |+++.+|... ...+++...++. ++++.|+..
T Consensus 216 ----~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~--~~~~~~~~~~~~k~~~i~g~~~ 281 (341)
T cd08237 216 ----D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSE--YPVPINTRMVLEKGLTLVGSSR 281 (341)
T ss_pred ----h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecC--CCcccCHHHHhhCceEEEEecc
Confidence 1 1122 79999999994 45689999999998 9999999642 234555555544 889998853
Q ss_pred cCCCchhhHHHHHHHHHcC---CCCCCCceeEEEecc---cHHHHHHHHhcCceeeEEEEeC
Q 017457 313 GGLKPRSDIATLAQKYLDK---ELNLGEFITHEVSFH---DINKAFDLLLEGKSLRCIIWMD 368 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~---~~~~a~~~~~~~~~~kvvv~~~ 368 (371)
.. .++++++++++.++ +..+.++++++|+++ ++.++++...++..+|+++.++
T Consensus 282 ~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 282 ST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred cC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 32 46789999999998 335777889999985 5566665555544559999874
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6.9e-43 Score=329.67 Aligned_cols=335 Identities=24% Similarity=0.313 Sum_probs=274.7
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
+...+++++.+.|.+.++||+|||.++++|++|++...+.+... .+|.++|||++|+|+++|+.++++++||+|++.+
T Consensus 8 ~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 85 (351)
T cd08285 8 GIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGE--RHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPA 85 (351)
T ss_pred cCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCC--CCCcccCcceEEEEEEecCCcCccCCCCEEEEcC
Confidence 34458888999999999999999999999999999888775443 5688999999999999999999999999999988
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchhh
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIAC 162 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~aa 162 (371)
...|++|..|..+.++.|.....+...+...+ |+|++|+.++.+ .++++|+++++++++
T Consensus 86 ~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~-------------------g~~~~y~~v~~~~~~~~~lP~~~~~~~aa 146 (351)
T cd08285 86 ITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD-------------------GVFAEYFHVNDADANLAPLPDGLTDEQAV 146 (351)
T ss_pred cCCCCCCHHHHCcCcccCcCCCCCccccCCCC-------------------cceeEEEEcchhhCceEECCCCCCHHHhh
Confidence 78999999999999999975421100111122 499999999974 899999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.++..+.||+++ .....+++|++|||+|+|++|++++|+|+++|+.+|+++++++++.+.++++|+++++++++ .+
T Consensus 147 ~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~ 222 (351)
T cd08285 147 MLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GD 222 (351)
T ss_pred hhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CC
Confidence 998899999997 46788999999999988999999999999999966999999999999999999999999877 67
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH---hcCceEEEeeccCCCch
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI---LKGRSVCGTYFGGLKPR 318 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~ 318 (371)
+.+.+.+++.+ ++|++||++|+...+..++++++++ |+++.+|.........++...+ ....++.+..... ..
T Consensus 223 ~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~ 299 (351)
T cd08285 223 VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG--GR 299 (351)
T ss_pred HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC--cc
Confidence 88888888776 8999999999876689999999998 9999998754322334432222 2245565543211 23
Q ss_pred hhHHHHHHHHHcCCCCCCCc-eeEEEecccHHHHHHHHhcCce--eeEEEEe
Q 017457 319 SDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKS--LRCIIWM 367 (371)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~--~kvvv~~ 367 (371)
++++++++++.+|++.+..+ .++.++++++++||+.+.+++. .|+++.+
T Consensus 300 ~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 300 LRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred ccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 57889999999999887443 4456999999999999988763 4999864
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=3.1e-42 Score=323.69 Aligned_cols=328 Identities=21% Similarity=0.364 Sum_probs=270.1
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.+.+.+++++++.|+|.++||+||+.++++|++|++.+.|.++.. .+|.++|||++|+|+++|+.++.+++||+|++.
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 84 (339)
T PRK10083 7 EKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA--KYPRVIGHEFFGVIDAVGEGVDAARIGERVAVD 84 (339)
T ss_pred ecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC--CCCcccccceEEEEEEECCCCccCCCCCEEEEc
Confidence 344568999999999999999999999999999999988876543 578899999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
+...|+.|.+|..+.+++|..... .++..+ |+|++|+.++.++++++|+++++++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~a~- 141 (339)
T PRK10083 85 PVISCGHCYPCSIGKPNVCTSLVV---LGVHRD-------------------GGFSEYAVVPAKNAHRIPDAIADQYAV- 141 (339)
T ss_pred cccCCCCCccccCcCcccCCCCce---EEEccC-------------------CcceeeEEechHHeEECcCCCCHHHHh-
Confidence 999999999999999999975542 222223 489999999999999999999998876
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
+...+.++++ +....++++|++|+|+|+|++|++++|+|++ +|++.|+++++++++.+.++++|+++++++++ .+
T Consensus 142 ~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~ 217 (339)
T PRK10083 142 MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ---EP 217 (339)
T ss_pred hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---cc
Confidence 4457788885 5677889999999999999999999999996 69966888999999999999999999998776 56
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 320 (371)
+.+.+.. .+ ++|++||++|+...+..++++++++ |+++.+|.... ...++...+.. ++++.+... ..+.
T Consensus 218 ~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~ 288 (339)
T PRK10083 218 LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSE--PSEIVQQGITGKELSIFSSRL----NANK 288 (339)
T ss_pred HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCC--CceecHHHHhhcceEEEEEec----Chhh
Confidence 6665533 23 5689999999776689999999998 99999996432 22333333333 666666542 2457
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-e-eeEEEEeCc
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIWMDK 369 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvv~~~~ 369 (371)
+++++++++++++.+..++++.|+++++++|++.+.++. . .|+++.+.+
T Consensus 289 ~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 289 FPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred HHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 899999999998876555779999999999999987643 3 599998764
No 35
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=3.4e-42 Score=322.59 Aligned_cols=323 Identities=24% Similarity=0.399 Sum_probs=273.4
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.++++++++++|.|++.++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|+.++++++||+|++.
T Consensus 8 ~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~ 85 (333)
T cd08296 8 EPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL--SYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVG 85 (333)
T ss_pred cCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC--CCCcccCcceeEEEEEECCCCccCCCCCEEEec
Confidence 344679999999999999999999999999999999988865433 568899999999999999999999999999875
Q ss_pred c-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 84 F-HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 84 ~-~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
+ ...|+.|.+|..++++.|..... .|+...| +|++|+.++.+.++++|+++++.+++
T Consensus 86 ~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------------------~~a~~~~v~~~~~~~lp~~~~~~~aa 143 (333)
T cd08296 86 WHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------------------GYAEYMLAPAEALARIPDDLDAAEAA 143 (333)
T ss_pred cccCCCCCChhhhCcCcccCCCCCc---cCcccCC-------------------cceeEEEEchhheEeCCCCCCHHHhh
Confidence 5 46799999999999999987653 3443333 89999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++++.+||+++. ..+++++++|||+|+|++|++++++|+++|+ +|+++++++++++.++++|+++++++.+ .+
T Consensus 144 ~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~ 218 (333)
T cd08296 144 PLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK---ED 218 (333)
T ss_pred hhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---cc
Confidence 99999999999764 4589999999999999999999999999999 8999999999999999999999998877 56
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 321 (371)
+.+.+.++ +++|+++|++|....+..++++++++ |+++.+|... ...+++...++. ++++.++.... ..++
T Consensus 219 ~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~~---~~~~ 290 (333)
T cd08296 219 VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAG--EPVAVSPLQLIMGRKSIHGWPSGT---ALDS 290 (333)
T ss_pred HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCC--CCCCcCHHHHhhcccEEEEeCcCC---HHHH
Confidence 77777665 37999999987666689999999998 9999999743 234555554444 89999875332 4578
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
+.++++++++++.. .+ +.|+++++++||+.+.+++.. |+|++
T Consensus 291 ~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 291 EDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 88999998886653 35 689999999999999988765 88763
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.4e-42 Score=331.96 Aligned_cols=326 Identities=21% Similarity=0.254 Sum_probs=257.4
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeeccccccccc-ccCCC-C-C--CCCCCccccccccEEEEEeCCCCC-CcCCCC
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTD-L-P--KLPLPVIFGHEAVGVVESVGEYVE-EVKERD 78 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~-~-~--~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd 78 (371)
+...++++++|.|+|.++||+|||.+++||++|++.+ .|... . + ...+|.++|||++|+|+++|++++ +|++||
T Consensus 10 ~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGd 89 (410)
T cd08238 10 GKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQ 89 (410)
T ss_pred cCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCC
Confidence 3446999999999999999999999999999999976 45421 1 0 014788999999999999999998 699999
Q ss_pred EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc----eeEECCC
Q 017457 79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----HVVKITP 154 (371)
Q Consensus 79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~ 154 (371)
+|++.+...|+.|.+|.. .|+..+| +|+||+.++++ .++++|+
T Consensus 90 rV~~~~~~~c~~~~~c~~--------------~g~~~~G-------------------~~aey~~v~~~~~~~~~~~lP~ 136 (410)
T cd08238 90 RFVIQPALILPDGPSCPG--------------YSYTYPG-------------------GLATYHIIPNEVMEQDCLLIYE 136 (410)
T ss_pred EEEEcCCcCCCCCCCCCC--------------ccccCCC-------------------cceEEEEecHHhccCCeEECCC
Confidence 999999888999887721 2333334 99999999987 6899999
Q ss_pred CCCcchhhccc-c-chhhhHHHH--------HHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhHH
Q 017457 155 HIPLGIACLLS-C-GVSTGVGAA--------WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNR--ASKIIGVDINPEKF 221 (371)
Q Consensus 155 ~l~~~~aa~~~-~-~~~ta~~~l--------~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g--~~~Vi~~~~~~~~~ 221 (371)
++++++++.+. . ...+++.++ ....++++|++|+|+|+ |++|++++|+|+++| +.+|++++++++|+
T Consensus 137 ~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~ 216 (410)
T cd08238 137 GDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERL 216 (410)
T ss_pred CCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHH
Confidence 99999988652 1 112233322 24567899999999985 999999999999975 45799999999999
Q ss_pred HHHHHh--------Ccc-eEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC-
Q 017457 222 EIGKKF--------GIT-DFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH- 290 (371)
Q Consensus 222 ~~~~~l--------ga~-~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~- 290 (371)
+.++++ |++ .++++.+ ..++.+.+++++++ ++|++||++|.+..++.++++++++ |+++.++....
T Consensus 217 ~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~ 293 (410)
T cd08238 217 ARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCLNFFAGPVDK 293 (410)
T ss_pred HHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeEEEEEccCCC
Confidence 999997 766 5677543 14677888888887 9999999999877799999999997 88777643221
Q ss_pred CCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeCc
Q 017457 291 GSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMDK 369 (371)
Q Consensus 291 ~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~~ 369 (371)
....+++...++. ++++.|+.... ..+++++++++++|++.+.++++++|+|+++++|++.+..+..+|+++.++.
T Consensus 294 ~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~gKvvl~~~~ 370 (410)
T cd08238 294 NFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLPGIPGGKKLIYTQK 370 (410)
T ss_pred CccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhhccCCceEEEECCC
Confidence 1224555555555 88999975332 4679999999999999988889999999999999999984444599998754
No 37
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=2e-41 Score=321.07 Aligned_cols=353 Identities=39% Similarity=0.681 Sum_probs=285.1
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.++..++++++|.|++.++||+||+.++++|+.|.....|.++. .+|.++|+|++|+|+++|++++.+++||+|++.
T Consensus 8 ~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 84 (363)
T cd08279 8 EVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA---PLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLS 84 (363)
T ss_pred cCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC---CCCccccccceEEEEEeCCCccccCCCCEEEEC
Confidence 34466899999999999999999999999999999988886652 467789999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
+...|++|.+|..+.++.|...... .+|...++..++.. -|.....+...|+|++|+.++++.++++|+++++++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~ 162 (363)
T cd08279 85 WIPACGTCRYCSRGQPNLCDLGAGI-LGGQLPDGTRRFTA-DGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL 162 (363)
T ss_pred CCCCCCCChhhcCCCcccCcccccc-cccccCCCcccccc-cCccccccccCccceeeEEeccccEEECCCCCChHHeeh
Confidence 9999999999999999999753210 01111111000000 000011112236999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+++++.+||+++....++.++++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++++++.+. .++
T Consensus 163 ~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~ 239 (363)
T cd08279 163 LGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE---DDA 239 (363)
T ss_pred hcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccH
Confidence 99999999998888888999999999988999999999999999955999999999999999999999998877 678
Q ss_pred HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457 244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 321 (371)
...+.+++.+ ++|++||++++......++++++++ |+++.+|.........++...+.. +..+.++.+......+.+
T Consensus 240 ~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (363)
T cd08279 240 VEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDI 318 (363)
T ss_pred HHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHH
Confidence 8888888765 8999999999766689999999998 999999864333345566666554 677787765444445778
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
++++++++++.+.+..++.++|+++++++|++.+.+++..|.|+
T Consensus 319 ~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 319 PRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 99999999998876655678999999999999998877665554
No 38
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1.7e-41 Score=320.07 Aligned_cols=327 Identities=27% Similarity=0.413 Sum_probs=270.6
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-------CCCCCCccccccccEEEEEeCCCCC--CcCCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-------PKLPLPVIFGHEAVGVVESVGEYVE--EVKER 77 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-------~~~~~p~~~G~e~~G~Vv~vG~~v~--~~~~G 77 (371)
.++++++.+.|+|.+++|+||+.++++|++|++...|.... ....+|.++|||++|+|+++|+.++ +|++|
T Consensus 10 ~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~G 89 (350)
T cd08256 10 QDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVG 89 (350)
T ss_pred CceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCC
Confidence 45999999999999999999999999999999988876311 0014677899999999999999999 89999
Q ss_pred CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc-eeEECCCCC
Q 017457 78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT-HVVKITPHI 156 (371)
Q Consensus 78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~-~~~~~P~~l 156 (371)
|+|+..+...|++|++|..+.++.|.+... +|+... ..|+|++|+.++++ .++++|+++
T Consensus 90 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~-----------------~~g~~~~~~~~~~~~~~~~lP~~~ 149 (350)
T cd08256 90 DRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNN-----------------VNGGMAEYMRFPKEAIVHKVPDDI 149 (350)
T ss_pred CEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccC-----------------CCCcceeeEEcccccceEECCCCC
Confidence 999999999999999999999999975431 333110 12489999999988 678999999
Q ss_pred CcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457 157 PLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236 (371)
Q Consensus 157 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 236 (371)
++++++.+ .+++|+|+++ ...+++++++|||.|+|++|++++++|+++|+..++++++++++.+.++++|++++++++
T Consensus 150 ~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~ 227 (350)
T cd08256 150 PPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP 227 (350)
T ss_pred CHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC
Confidence 99999988 7999999976 778899999999977799999999999999986788899999999999999999999887
Q ss_pred CCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH--hcCceEEEeecc
Q 017457 237 TCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI--LKGRSVCGTYFG 313 (371)
Q Consensus 237 ~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~g~~~~ 313 (371)
+ .++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|..... ..++...+ .+++++.++...
T Consensus 228 ~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 301 (350)
T cd08256 228 E---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDP--VTVDWSIIGDRKELDVLGSHLG 301 (350)
T ss_pred C---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCC--CccChhHhhcccccEEEEeccC
Confidence 6 6788888888887 8999999999765588999999998 999999864322 23333333 236677776533
Q ss_pred CCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 314 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
. ..+.+++++++++.+.+..++++.|+++++++|++.+.+++.. |+++
T Consensus 302 ~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 302 P----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred c----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 2 3588899999999887655467999999999999999887655 7763
No 39
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=1.7e-41 Score=319.70 Aligned_cols=333 Identities=29% Similarity=0.429 Sum_probs=274.7
Q ss_pred CCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 5 PGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
....+.+.+.|.|+| .++||+||+.++++|++|++.+.|.++.. .+|.++|+|++|+|+++|++++++++||+|++.
T Consensus 8 ~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 85 (347)
T cd05278 8 GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGA--KHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVP 85 (347)
T ss_pred cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCC--CCCceeccceEEEEEEECCCccccCCCCEEEec
Confidence 334588889999999 99999999999999999999988877654 678899999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchh
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIA 161 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~a 161 (371)
+...||.|.+|..+.+..|.........+... .|+|++|++++++ +++++|++++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~g~~~~~~~v~~~~~~~~~lP~~~~~~~a 146 (347)
T cd05278 86 CITFCGRCRFCRRGYHAHCENGLWGWKLGNRI-------------------DGGQAEYVRVPYADMNLAKIPDGLPDEDA 146 (347)
T ss_pred CCCCCCCChhHhCcCcccCcCCCcccccccCC-------------------CCeeeEEEEecchhCeEEECCCCCCHHHH
Confidence 99999999999999999997543210011111 2499999999987 99999999999999
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
+.+++++.|||+++ ...+++++++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+++++++++ .
T Consensus 147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~ 222 (347)
T cd05278 147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---G 222 (347)
T ss_pred hhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---c
Confidence 99999999999986 6788999999999888999999999999999657888888888999999999999998877 6
Q ss_pred cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhh
Q 017457 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 320 (371)
++.+.+++++++ ++|++||++++...+..++++++++ |+++.+|..............+..+.++.+..... .+.
T Consensus 223 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 298 (347)
T cd05278 223 DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV---RAR 298 (347)
T ss_pred hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc---hhH
Confidence 788888888776 8999999999855589999999998 99999986432211112222233467777654322 457
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-e-eEEEE
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-L-RCIIW 366 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~-kvvv~ 366 (371)
+++++++++++.+.+...+...++++++++|++.+.+++. . |++++
T Consensus 299 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 299 MPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred HHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 8899999999988765545688999999999999887765 3 88765
No 40
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=4.4e-41 Score=315.98 Aligned_cols=325 Identities=28% Similarity=0.449 Sum_probs=277.0
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
++..+++.+.+.|++++++|+||+.++++|++|+....|.++. ....+|.++|+|++|+|+++|+++++|++||+|++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 88 (340)
T cd05284 9 YGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVH 88 (340)
T ss_pred CCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEc
Confidence 4467888899999999999999999999999999998887653 222678899999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
+...|+.|..|..+.+++|..... .|+...| +|++|+.+++++++++|+++++++++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~P~~ls~~~aa~ 146 (340)
T cd05284 89 PPWGCGTCRYCRRGEENYCENARF---PGIGTDG-------------------GFAEYLLVPSRRLVKLPRGLDPVEAAP 146 (340)
T ss_pred CCCCCCCChHHhCcCcccCCCCcc---cCccCCC-------------------cceeeEEecHHHeEECCCCCCHHHhhh
Confidence 999999999999999999987765 4544444 999999999999999999999999999
Q ss_pred cccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 164 LSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
+++.+.|||+++... ..+.++++|||+|+|++|++++++|+.+| . +|+++.+++++.+.++++|++++++++. .
T Consensus 147 l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~ 222 (340)
T cd05284 147 LADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD---D 222 (340)
T ss_pred hcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c
Confidence 999999999987665 46889999999999889999999999999 6 8999998999999999999999999877 4
Q ss_pred cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchh
Q 017457 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~ 319 (371)
+.+.+.+++++ ++|+++|++|+......++++++++ |+++.+|.... ..++... +.+++++.++... ...
T Consensus 223 -~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~ 294 (340)
T cd05284 223 -VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG---TRA 294 (340)
T ss_pred -HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc---cHH
Confidence 78888888877 8999999999866689999999998 99999986432 2333333 3347888877533 246
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.+++++++++++.+.+ .+ +.|+++++++|++.+.+++.. |+++.
T Consensus 295 ~~~~~~~~l~~g~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~ 339 (340)
T cd05284 295 ELVEVVALAESGKVKV--EI-TKFPLEDANEALDRLREGRVTGRAVLV 339 (340)
T ss_pred HHHHHHHHHHhCCCCc--ce-EEEeHHHHHHHHHHHHcCCccceEEec
Confidence 7889999999997764 34 689999999999999887665 88765
No 41
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=4.9e-41 Score=320.65 Aligned_cols=345 Identities=26% Similarity=0.371 Sum_probs=277.0
Q ss_pred cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.+...++++++|.|.| ++++|+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|+.++++++||+|++
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~ 84 (386)
T cd08283 7 HGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM--KKGDILGHEFMGVVEEVGPEVRNLKVGDRVVV 84 (386)
T ss_pred ecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC--CCCccccccceEEEEEeCCCCCCCCCCCEEEE
Confidence 3445689999999988 49999999999999999999999987654 57889999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccccccCCceeecc-cCcccccceeeeecc--eeEECCCC
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGY----RPNMPRDGTSRFRELKGDVIHHF-LNISSFTEYSVVDIT--HVVKITPH 155 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~----~~g~~~~g~~~~~~~~~~~~~~~-~~~g~~a~~~~v~~~--~~~~~P~~ 155 (371)
.+...||+|.+|..+.++.|+...... .+|....| ..| ..+-+ ...|+|++|+.++++ .++++|++
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 85 PFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAG------IFG-YSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred cCcCCCCCChhhcCCCcccCCCccccccccccccccccc------ccc-cccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 998899999999999999998643210 00110000 000 00000 013599999999988 89999999
Q ss_pred CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235 (371)
Q Consensus 156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 235 (371)
+++.+++.+++.++|||+++ ...++++|++|||+|+|++|++++++|+++|+.+|+++++++++.+.+++++...++++
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~ 236 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF 236 (386)
T ss_pred CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence 99999999999999999987 77889999999999889999999999999998569999999999999999844467776
Q ss_pred CCCCCc-cHHHHHHHhhCC-CcCEEEECCCCh---------------------HHHHHHHHHhhcCCceEEEECccCCCC
Q 017457 236 ATCGDK-TVSQVIKEMTDG-GADYCFECIGLT---------------------SVMNDAFNSSREGWGKTVILGVEMHGS 292 (371)
Q Consensus 236 ~~~~~~-~~~~~i~~~~~g-g~d~vid~~g~~---------------------~~~~~~~~~l~~~~G~~v~~g~~~~~~ 292 (371)
.. . ++.+.+.+++++ ++|++||++|+. ..+..++++++++ |+++.+|.....
T Consensus 237 ~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~- 311 (386)
T cd08283 237 EE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT- 311 (386)
T ss_pred Cc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-
Confidence 65 4 478888888877 899999999753 3478899999998 999999874332
Q ss_pred ceecCHHHHh-cCceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-e-eeEEEE
Q 017457 293 PISLNSIEIL-KGRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-S-LRCIIW 366 (371)
Q Consensus 293 ~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~-~kvvv~ 366 (371)
...++...++ ++.++.+.... ..+.++++++++.++++....++++.|+++++++|++.+.+++ . +|++++
T Consensus 312 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 312 VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 2334443333 47888876422 2457889999999998876666778999999999999988876 3 499885
No 42
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=1.5e-41 Score=314.48 Aligned_cols=298 Identities=17% Similarity=0.217 Sum_probs=232.3
Q ss_pred ccCCCCcEEEEEecCCCCCCeEEEEEeEeecc-cccccccccCCCCCC-CCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 3 RIPGKPLVIEEIEVEPPKAWEIRIKILCTSLC-HSDVTFWKSSTDLPK-LPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~-~~D~~~~~g~~~~~~-~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
+.+.+.+++++.|.|+|+++||+|||++++|| ++|++.+.|.++... ..+|.++|||++|+|+++|+++ +|++||+|
T Consensus 7 ~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV 85 (308)
T TIGR01202 7 LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRV 85 (308)
T ss_pred EeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEE
Confidence 34455699999999999999999999999996 699998888764321 2579999999999999999998 69999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
++. |..|.+|.. | .. |+|+||+.++++.++++|++++++.
T Consensus 86 ~~~----~~~c~~~~~---------------~--~~-------------------G~~aey~~v~~~~~~~ip~~~~~~~ 125 (308)
T TIGR01202 86 FVP----GSNCYEDVR---------------G--LF-------------------GGASKRLVTPASRVCRLDPALGPQG 125 (308)
T ss_pred EEe----Ccccccccc---------------c--cC-------------------CcccceEEcCHHHceeCCCCCCHHH
Confidence 873 223433211 0 11 4999999999999999999999864
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
+.++ .+.|||+++.. . ..++++|||+|+|++|++++|+||++|++.|++++.++++++.+.. ..++|+.+
T Consensus 126 -a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~~~i~~~~--- 195 (308)
T TIGR01202 126 -ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---YEVLDPEK--- 195 (308)
T ss_pred -Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---ccccChhh---
Confidence 4454 57899997643 3 3468899999999999999999999999667777877777766544 34555432
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~ 319 (371)
. .+.++|++|||+|+...++.++++++++ |+++.+|.... ...++...++. ++++.++.... .+
T Consensus 196 ~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~ 260 (308)
T TIGR01202 196 D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTE--PVNFDFVPAFMKEARLRIAAEWQ---PG 260 (308)
T ss_pred c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCC--CcccccchhhhcceEEEEecccc---hh
Confidence 1 1238999999999987689999999998 99999997432 23444444443 77888764322 46
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce-eeEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS-LRCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~-~kvvv~ 366 (371)
+++++++++++|++.+.++++++|+|+|+++|++.+.++.. +|+++.
T Consensus 261 ~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 261 DLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 79999999999999988889999999999999998876544 588873
No 43
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=1.1e-40 Score=313.81 Aligned_cols=329 Identities=28% Similarity=0.395 Sum_probs=276.9
Q ss_pred CCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 6 GKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 6 ~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
...+++++.|.|+| .++||+||++++++|+.|+..+.|.++.. .+|.++|||++|+|+++|++++++++||+|++.+
T Consensus 9 ~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~ 86 (345)
T cd08286 9 PGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV--TPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISC 86 (345)
T ss_pred CCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC--CCCceecccceEEEEEeccCccccCCCCEEEECC
Confidence 34588999999886 89999999999999999999998876544 4578999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchhh
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIAC 162 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~aa 162 (371)
...|++|.+|..+..+.|...... .|...+ |+|++|+.++.+ .++++|+++++.+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~~~lp~~~~~~~aa 145 (345)
T cd08286 87 ISSCGTCGYCRKGLYSHCESGGWI--LGNLID-------------------GTQAEYVRIPHADNSLYKLPEGVDEEAAV 145 (345)
T ss_pred cCCCCCChHHHCcCcccCCCcccc--cccccC-------------------CeeeeEEEcccccCceEECCCCCCHHHhh
Confidence 999999999999988888765421 122222 499999999987 899999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++.+++||+++....+++++++|||.|+|++|++++|+|+++|..+|+++++++++.+.++++|++.++++++ .+
T Consensus 146 ~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~ 222 (345)
T cd08286 146 MLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GD 222 (345)
T ss_pred hccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---cc
Confidence 999999999987777788999999999988999999999999999438999998999999999999999999876 67
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhh
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~ 320 (371)
+.+.+.+++++ ++|++||++++...+..++++++++ |+++.+|.... ...++...++ ++.++.+.... ...
T Consensus 223 ~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~ 295 (345)
T cd08286 223 AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGK--PVDLHLEKLWIKNITITTGLVD----TNT 295 (345)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCC--CCCcCHHHHhhcCcEEEeecCc----hhh
Confidence 88888888877 8999999999877689999999998 99999986322 2445555544 47888775322 245
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC---ceeeEEEEe
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG---KSLRCIIWM 367 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~---~~~kvvv~~ 367 (371)
+++++++++++.+.+.++++++|++++++++++.+.+. ...|+++++
T Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 296 TPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 78899999999887666667999999999999998875 345999864
No 44
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1.7e-40 Score=313.27 Aligned_cols=331 Identities=28% Similarity=0.435 Sum_probs=274.2
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC----------CCCCCCccccccccEEEEEeCCCCCC
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL----------PKLPLPVIFGHEAVGVVESVGEYVEE 73 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~----------~~~~~p~~~G~e~~G~Vv~vG~~v~~ 73 (371)
.++.+++++++|.|++.++||+||+.++++|++|++...|.++. ....+|.++|+|++|+|+++|+++++
T Consensus 8 ~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~ 87 (350)
T cd08240 8 EPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAAD 87 (350)
T ss_pred cCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCC
Confidence 44556899999999999999999999999999999998876532 01145678999999999999999999
Q ss_pred cCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECC
Q 017457 74 VKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKIT 153 (371)
Q Consensus 74 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P 153 (371)
+++||+|++.+...|+.|.+|..+.++.|..... .|.... |+|++|+.++.+.++++|
T Consensus 88 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~~p 145 (350)
T cd08240 88 VKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQD-------------------GGYAEYVIVPHSRYLVDP 145 (350)
T ss_pred CCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeecc-------------------CcceeeEEecHHHeeeCC
Confidence 9999999999999999999999999999976542 222222 489999999999999999
Q ss_pred CCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE
Q 017457 154 PHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI 233 (371)
Q Consensus 154 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~ 233 (371)
+++++.+++.+.+.+.|||+++.....++++++|||+|+|++|++++|+|+++|+++|+++++++++.+.++++|++.++
T Consensus 146 ~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 225 (350)
T cd08240 146 GGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVV 225 (350)
T ss_pred CCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEe
Confidence 99999999999999999999876666667899999998899999999999999997789999999999999999999888
Q ss_pred cCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457 234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 313 (371)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~ 313 (371)
+.++ .++.+.+.+..++++|++||++|....+..++++|+++ |+++.+|............. .+.+.++.+....
T Consensus 226 ~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~ 300 (350)
T cd08240 226 NGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTIQGSYVG 300 (350)
T ss_pred cCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEEEEcccC
Confidence 8766 56777777776668999999999766689999999998 99999987443222222222 2347788876543
Q ss_pred CCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 314 GLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
. .+++.+++++++++.+... ....|+++++++|++.+.+++.. |+++.
T Consensus 301 ~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 301 S---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred C---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 3 3678889999999977643 45789999999999999887654 88764
No 45
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=2.5e-40 Score=316.84 Aligned_cols=328 Identities=17% Similarity=0.187 Sum_probs=267.3
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC--------CCCCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLPVIFGHEAVGVVESVGEYVEEVKERDL 79 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 79 (371)
.+++++.|.|+++++||+||+.++++|++|++...|.... .....+.++|||++|+|+++|++++.+++||+
T Consensus 29 ~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~ 108 (393)
T cd08246 29 AIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDE 108 (393)
T ss_pred ceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCE
Confidence 4788899999999999999999999999999887765210 00012358899999999999999999999999
Q ss_pred EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457 80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 159 (371)
Q Consensus 80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~ 159 (371)
|++.+...|+.|..|..+.+++|..... +|+... .|+|++|+.++..+++++|++++++
T Consensus 109 V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a~y~~v~~~~l~~iP~~l~~~ 167 (393)
T cd08246 109 VVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFAQFALVQATQLMPKPKHLSWE 167 (393)
T ss_pred EEEeccccccCccccccccccccccccc---ccccCC------------------CCcceeEEEechHHeEECCCCCCHH
Confidence 9999999999999999999999975432 343211 2499999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHH--cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCC
Q 017457 160 IACLLSCGVSTGVGAAWKV--AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPA 236 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~--~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~ 236 (371)
+++.+++.+.|||+++... ++++++++|||+|+ |++|++++++|+++|+ +++++++++++++.++++|++++++++
T Consensus 168 ~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~s~~~~~~~~~~G~~~~i~~~ 246 (393)
T cd08246 168 EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEYCRALGAEGVINRR 246 (393)
T ss_pred HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 9999999999999987654 67899999999997 9999999999999999 788888899999999999999999864
Q ss_pred CCC-------------------CccHHHHHHHhhCC--CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee
Q 017457 237 TCG-------------------DKTVSQVIKEMTDG--GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS 295 (371)
Q Consensus 237 ~~~-------------------~~~~~~~i~~~~~g--g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~ 295 (371)
+.+ ...+.+.+.+++++ ++|++||++|+.. +..++++++++ |+++.+|.... ....
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~ 323 (393)
T cd08246 247 DFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRG-GMVVICAGTTG-YNHT 323 (393)
T ss_pred ccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccC-CEEEEEcccCC-CCCC
Confidence 410 01356778888876 7999999999855 89999999998 99999986432 2233
Q ss_pred cCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC-cee-eEEE
Q 017457 296 LNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG-KSL-RCII 365 (371)
Q Consensus 296 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~-kvvv 365 (371)
++...+.. +.++.++.... .+++.+++++++++.+.. .+++.|+++++++|++.+.++ +.. |+++
T Consensus 324 ~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 324 YDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred CcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 44444444 77788775433 357888999999997653 367899999999999999887 554 7765
No 46
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=4.3e-40 Score=309.88 Aligned_cols=331 Identities=25% Similarity=0.414 Sum_probs=278.1
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
+.+.++++++.|.|.+.+++|+||+.++++|++|+....|..+.. .+|.++|+|++|+|+++|++++.+++||+|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~ 85 (345)
T cd08260 8 EFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDV--TLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVP 85 (345)
T ss_pred cCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCC--CCCeeeccceeEEEEEECCCCccCCCCCEEEEC
Confidence 344568899999999999999999999999999999988876544 668899999999999999999999999999886
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcchh
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLGIA 161 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~~a 161 (371)
+...|++|.+|..+..++|..... .++... |+|++|+.+++. +++++|++++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~~~iP~~~~~~~a 143 (345)
T cd08260 86 FVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHP-------------------GSFAEYVAVPRADVNLVRLPDDVDFVTA 143 (345)
T ss_pred CCCCCCCCccccCcCcccCCCCcc---cccCCC-------------------CcceeEEEcccccCceEECCCCCCHHHh
Confidence 667899999999999999997542 333333 389999999975 89999999999999
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
+.+++.+.|||+++....++.++++|||+|+|++|++++++|+++|+ +|+++.+++++.+.++++|+++++++++ ..
T Consensus 144 a~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~ 220 (345)
T cd08260 144 AGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE--VE 220 (345)
T ss_pred hhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--ch
Confidence 99999999999987777889999999999999999999999999999 8999999999999999999999988653 13
Q ss_pred cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc-eecCHHHH-hcCceEEEeeccCCCchh
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP-ISLNSIEI-LKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~~~g~~~~~~~~~~ 319 (371)
++.+.+.++..+++|++||++|+...+...+++++++ |+++.+|....... ..++...+ .++.++.+.... ..+
T Consensus 221 ~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 296 (345)
T cd08260 221 DVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGM---PAH 296 (345)
T ss_pred hHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcC---CHH
Confidence 6777777777668999999999755588999999998 99999986433221 34455545 337788876532 246
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
.+++++++++++++.+...+++.++++++++|++.+.+++.. |+++
T Consensus 297 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 343 (345)
T cd08260 297 RYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVI 343 (345)
T ss_pred HHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEe
Confidence 788999999999887655567999999999999999887665 7765
No 47
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=3.2e-40 Score=314.91 Aligned_cols=330 Identities=25% Similarity=0.375 Sum_probs=267.8
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC------CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST------DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~------~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
..+++++.|.|+++++||+||+.++++|++|++.+.+.. +.. ..+|.++|||++|+|+++|+++++|++||+|
T Consensus 37 ~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 115 (384)
T cd08265 37 PELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGL-TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPV 115 (384)
T ss_pred CCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcc-cCCCcccccceEEEEEEECCCCCCCCCCCEE
Confidence 468999999999999999999999999999998876321 111 1567899999999999999999999999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCC----
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHI---- 156 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l---- 156 (371)
++.+..+|+.|+.|..+.+++|..... .|+..+| +|++|+.++++.++++|+++
T Consensus 116 ~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~v~v~~~~~~~lP~~~~~~~ 173 (384)
T cd08265 116 TAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG-------------------AFAEYIAVNARYAWEINELREIYS 173 (384)
T ss_pred EECCCCCCCCChhhhCcCcccCCCcce---eeecCCC-------------------cceeeEEechHHeEECCccccccc
Confidence 999999999999999999999986553 4443344 89999999999999999864
Q ss_pred ---CcchhhccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE
Q 017457 157 ---PLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF 232 (371)
Q Consensus 157 ---~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v 232 (371)
++. ++++..++++||+++... .++++|++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++++
T Consensus 174 ~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~ 252 (384)
T cd08265 174 EDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYV 252 (384)
T ss_pred cCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEE
Confidence 444 555666889999987666 689999999999889999999999999999779999989999999999999999
Q ss_pred EcCCCCCCccHHHHHHHhhCC-CcCEEEECCCCh-HHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEE
Q 017457 233 INPATCGDKTVSQVIKEMTDG-GADYCFECIGLT-SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCG 309 (371)
Q Consensus 233 ~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~-~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g 309 (371)
+++++....++.+.+.+++++ ++|+++|++|+. ..+..++++++++ |+++.+|.... ...++...+.. +.++.+
T Consensus 253 v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~ 329 (384)
T cd08265 253 FNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAAT--TVPLHLEVLQVRRAQIVG 329 (384)
T ss_pred EcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCC--CCcccHHHHhhCceEEEE
Confidence 987751123788888888887 999999999973 3478999999998 99999986432 23333333333 567776
Q ss_pred eeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 310 TYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
..... ....+++++++++++.+.+..++++.|+++++++|++...++...|+++
T Consensus 330 ~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 330 AQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred eeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 64221 1346889999999998876555678999999999999976665457764
No 48
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=5.5e-40 Score=308.70 Aligned_cols=331 Identities=26% Similarity=0.426 Sum_probs=267.6
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
+++.++++.+.|.|+|+++||+||++++++|++|+.++.+.. ......+|.++|||++|+|+++|++++.+++||+|++
T Consensus 8 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 87 (341)
T PRK05396 8 KAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSG 87 (341)
T ss_pred cCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEE
Confidence 455679999999999999999999999999999998776532 1111246778999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+.+.|+.|.+|..+.+++|...+. .+...+ |+|++|+.++.+.++++|+++++.+++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~iP~~l~~~~~~ 145 (341)
T PRK05396 88 EGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRP-------------------GAFAEYLVIPAFNVWKIPDDIPDDLAA 145 (341)
T ss_pred CCCCCCCCChhhhCcChhhCCCcce---eeecCC-------------------CcceeeEEechHHeEECcCCCCHHHhH
Confidence 9999999999999999999976432 333333 499999999999999999999998887
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+ ..+.++++++.. ...+|++|+|.|+|++|++++|+|+++|+++|+++++++++.+.++++|+++++++++ .+
T Consensus 146 ~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~ 219 (341)
T PRK05396 146 IF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK---ED 219 (341)
T ss_pred hh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---cc
Confidence 55 466666665432 3468999999888999999999999999966888888999999999999999998877 67
Q ss_pred HHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhh
Q 017457 243 VSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 243 ~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~ 320 (371)
+.+.+.+++.+ ++|++|||.|+...+..++++++++ |+++.+|..... ..++...+.. ++++.++..... .+.
T Consensus 220 ~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~l~~~~~~~~--~~~ 294 (341)
T PRK05396 220 LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGD--MAIDWNKVIFKGLTIKGIYGREM--FET 294 (341)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--CcccHHHHhhcceEEEEEEccCc--cch
Confidence 88888888876 9999999999877789999999998 999999864322 2233333333 677777642211 234
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEeC
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWMD 368 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~~ 368 (371)
+..+++++.++ +.+.+++.+.++++++++|++.+.++..+|++++++
T Consensus 295 ~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 295 WYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred HHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 66788888888 444445679999999999999988876459998764
No 49
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.2e-39 Score=309.28 Aligned_cols=351 Identities=32% Similarity=0.526 Sum_probs=281.0
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC---cCCCCEEe
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE---VKERDLVL 81 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~---~~~Gd~V~ 81 (371)
++.++++++.|.|.+.++||+||+.++++|++|+....+.++. .+|.++|||++|+|+.+|+++++ |++||+|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~ 85 (367)
T cd08263 9 PNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF---PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVV 85 (367)
T ss_pred CCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC---CCCcccccccceEEEEeCCCCCCCCcCCCCCEEE
Confidence 3456889999999999999999999999999999988886643 46789999999999999999988 99999999
Q ss_pred eccCCCCCCCccccCCCCCCCCCCCC-CCCCCCCCCC-CccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457 82 PIFHRDCGECRDCKSSKSNTCSKFGR-GYRPNMPRDG-TSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 159 (371)
Q Consensus 82 ~~~~~~~~~c~~~~~~~~~~~~~~~~-~~~~g~~~~g-~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~ 159 (371)
+.+...||.|.+|..+.+++|..... +...|..++| +..++...+.+. . ...|+|++|+.++.+.++++|+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~~~~~~~~~~~~~~P~~is~~ 163 (367)
T cd08263 86 GSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVY-M-YSMGGLAEYAVVPATALAPLPESLDYT 163 (367)
T ss_pred EcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccc-c-ccCCcceeEEEechhhEEECCCCCCHH
Confidence 98889999999999999999986431 0000001111 000000000000 0 112589999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457 160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
+++.++++++|||+++.....+.++++|||+|+|++|++++++|+++|+.+|+++++++++.+.++++|++++++++.
T Consensus 164 ~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~-- 241 (367)
T cd08263 164 ESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAK-- 241 (367)
T ss_pred HHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCc--
Confidence 999999999999998877778899999999988999999999999999944999988999999999999999999877
Q ss_pred CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc
Q 017457 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP 317 (371)
Q Consensus 240 ~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 317 (371)
.++.+.+.+++++ ++|++||++++......++++++++ |+++.++.........++...+ ..+.++.++.. ...
T Consensus 242 -~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 317 (367)
T cd08263 242 -EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG--ARP 317 (367)
T ss_pred -ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC--CCc
Confidence 6788888888766 8999999999873489999999998 9999998643322344555555 34778777532 222
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.+.+++++++++++.+.+..++++.+++++++++++.+.+++.. |+||+
T Consensus 318 ~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 318 RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 46788999999999887665567899999999999999887754 88763
No 50
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=8.4e-40 Score=307.77 Aligned_cols=333 Identities=26% Similarity=0.352 Sum_probs=271.6
Q ss_pred ccCCCCcEEEEEecCCCC-CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457 3 RIPGKPLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
+.+...+++++.+.|+|. ++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+++|++++.+++||+|+
T Consensus 6 ~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (344)
T cd08284 6 FKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS---TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVV 82 (344)
T ss_pred EecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC---CCCcccccceEEEEEeeCCCccccCCCCEEE
Confidence 344567999999999985 999999999999999999988886652 4577899999999999999999999999999
Q ss_pred eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc
Q 017457 82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG 159 (371)
Q Consensus 82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~ 159 (371)
+.+...|++|.+|..+.++.|..... .|...- ....|+|++|+.++++ .++++|+++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---------------~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~ 144 (344)
T cd08284 83 SPFTIACGECFYCRRGQSGRCAKGGL---FGYAGS---------------PNLDGAQAEYVRVPFADGTLLKLPDGLSDE 144 (344)
T ss_pred EcccCCCCCChHHhCcCcccCCCCcc---cccccc---------------CCCCCceeEEEEcccccCceEECCCCCCHH
Confidence 99989999999999999999976432 211000 0112589999999965 999999999999
Q ss_pred hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457 160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
+++.++++++|||+++. ...++++++|||+|+|++|++++++|+.+|+.+|+++++++++.+.++++|+. .++.+.
T Consensus 145 ~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~-- 220 (344)
T cd08284 145 AALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED-- 220 (344)
T ss_pred HhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC--
Confidence 99999999999999874 47889999999998899999999999999975799998888999999999975 456555
Q ss_pred CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc
Q 017457 240 DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP 317 (371)
Q Consensus 240 ~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~ 317 (371)
.++...+.+++++ ++|++||++++.......+++++++ |+++.+|.... .......... ..++++.+.. ...
T Consensus 221 -~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~ 294 (344)
T cd08284 221 -AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTA-EEFPFPGLDAYNKNLTLRFGR---CPV 294 (344)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCC-CCccccHHHHhhcCcEEEEec---CCc
Confidence 5788888888876 9999999999876689999999998 99999997432 2223333333 3477776542 112
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
.+.+++++++++++++.+..++++.+++++++++++.+.+++..|+++.
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 4678999999999988765556789999999999998887655787764
No 51
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=5.9e-40 Score=307.96 Aligned_cols=330 Identities=24% Similarity=0.378 Sum_probs=270.8
Q ss_pred CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457 2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
.+.++..+++++.+.|+|.++||+||+.++++|++|++...|.+... .+|.++|||++|+|+++|+.+++|++||+|+
T Consensus 5 ~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (337)
T cd05283 5 ARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPT--KYPLVPGHEIVGIVVAVGSKVTKFKVGDRVG 82 (337)
T ss_pred EecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCC--CCCcccCcceeeEEEEECCCCcccCCCCEEE
Confidence 34566789999999999999999999999999999999998876444 6788999999999999999999999999997
Q ss_pred -eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 82 -PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 82 -~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
......|++|.+|..+.+++|......+ .|+...+ ....|+|++|+.++.+.++++|+++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~ 147 (337)
T cd05283 83 VGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKYPDG--------------TITQGGYADHIVVDERFVFKIPEGLDSAA 147 (337)
T ss_pred EecCCCCCCCCccccCCchhcCcchhhcc-cccccCC--------------CcCCCcceeEEEechhheEECCCCCCHHH
Confidence 4445679999999999999998765311 1111101 11125899999999999999999999999
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
++.+.+.+.+||+++ ...++++|++++|.|+|++|++++++|+.+|+ +|+++++++++.+.++++|++++++.+.
T Consensus 148 aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--- 222 (337)
T cd05283 148 AAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--- 222 (337)
T ss_pred hhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---
Confidence 999999999999976 44568999999998889999999999999999 8999999999999999999999987665
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 319 (371)
.++.. . ..+++|++|||++.......++++++++ |+++.+|..... ..++...++ ++.++.++.... .+
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEP--LPVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCC--CccCHHHHhcCceEEEEecccC---HH
Confidence 33322 1 2348999999999875588999999998 999999874322 245555544 488999876543 46
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
++++++++++++++++ .+ +.|+++++++||+.+.+++.. |+|++
T Consensus 293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 8899999999997754 34 789999999999999988765 88763
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.4e-39 Score=306.50 Aligned_cols=329 Identities=26% Similarity=0.400 Sum_probs=271.6
Q ss_pred ccCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEe
Q 017457 3 RIPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
+.+.+++++++.|.|+| +++||+||+.++++|++|++...|.++. ..|.++|||++|+|+++|++++.+++||+|+
T Consensus 6 ~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~ 82 (345)
T cd08287 6 IHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT---RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVI 82 (345)
T ss_pred EecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC---CCCcccccceEEEEEEeCCCCCccCCCCEEE
Confidence 44555799999999986 8999999999999999999988887542 4578999999999999999999999999998
Q ss_pred eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc
Q 017457 82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG 159 (371)
Q Consensus 82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~ 159 (371)
+.....|+.|.+|..+..+.|..... .+...+| +|++|+.++.+ .++++|+++++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~~lP~~l~~~ 140 (345)
T cd08287 83 APFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG-------------------GQGEYVRVPLADGTLVKVPGSPSDD 140 (345)
T ss_pred eccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------------ceEEEEEcchhhCceEECCCCCChh
Confidence 86677899999999999999875432 3333333 99999999975 999999999882
Q ss_pred hhh-----ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457 160 IAC-----LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 234 (371)
Q Consensus 160 ~aa-----~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 234 (371)
.+. ++...+.+|++++ ....+++|++|+|.|+|++|++++|+|+++|+++++++++++++.+.++++|++++++
T Consensus 141 ~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~ 219 (345)
T cd08287 141 EDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVA 219 (345)
T ss_pred hhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEec
Confidence 221 2235788899876 4678999999999888999999999999999966899998888999999999999999
Q ss_pred CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhcCceEEEeec
Q 017457 235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTYF 312 (371)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~ 312 (371)
+.. .++.+.+.+++++ ++|+++|++|+...+..++++++++ |+++.+|.... ...++. ..+.++.++.+...
T Consensus 220 ~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~ 293 (345)
T cd08287 220 ERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAGGPA 293 (345)
T ss_pred CCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEEecC
Confidence 877 6788888888877 8999999999877789999999998 99999986432 234444 33455888887532
Q ss_pred cCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 313 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
. ..+.+++++++++++.+.+...+++.++++++++|++.+.+.+..|++++
T Consensus 294 ~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~ 344 (345)
T cd08287 294 P---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLR 344 (345)
T ss_pred C---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeC
Confidence 2 13578899999999988765556799999999999999888776799885
No 53
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.3e-40 Score=304.15 Aligned_cols=269 Identities=20% Similarity=0.374 Sum_probs=222.4
Q ss_pred cccccccEEEEEeCCCCC------CcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCce
Q 017457 55 IFGHEAVGVVESVGEYVE------EVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDV 128 (371)
Q Consensus 55 ~~G~e~~G~Vv~vG~~v~------~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 128 (371)
++|||++|+|+++|++|+ ++++||||++.+...|+.|++|+.++++.|..... .|+...+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence 589999999999999999 89999999999999999999999999999987543 3322110
Q ss_pred eecccCcccccceeeeecc-eeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC
Q 017457 129 IHHFLNISSFTEYSVVDIT-HVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR 207 (371)
Q Consensus 129 ~~~~~~~g~~a~~~~v~~~-~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g 207 (371)
......|+|+||+.++++ .++++|+++++++++.+++.+.|||+++ +.....+|++|||+|+|++|++++|+||++|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 000012599999999997 7999999999999999999999999975 4456679999999999999999999999999
Q ss_pred CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457 208 ASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 208 ~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+++|++++++++|++.++++|++++++.++ ..+.+.+++.+ ++|++||++|.+..++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 955999999999999999999999887644 24566677776 8999999999887789999999998 9999999
Q ss_pred ccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcC--CCCCCCceeEEEecccH
Q 017457 287 VEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDK--ELNLGEFITHEVSFHDI 348 (371)
Q Consensus 287 ~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~~~~~~~~~~ 348 (371)
........+++...++. ++++.|+.... .++++++++++.++ ++++.++++++||++++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 74333345666666655 89999975332 46799999999984 66777889999999874
No 54
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.5e-39 Score=304.48 Aligned_cols=329 Identities=27% Similarity=0.448 Sum_probs=267.7
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccC-CCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.....+++++.|.|.|.++||+|||.++++|+.|++.+.+. .......+|.++|+|++|+|+++|+++++|++||+|++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 84 (343)
T cd05285 5 HGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAI 84 (343)
T ss_pred ecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEE
Confidence 34456899999999999999999999999999998876432 11111135678999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
.+...|++|++|..+.+++|.+.... ...... |+|++|++++++.++++|+++++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~~~~aa 143 (343)
T cd05285 85 EPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPVD-------------------GTLCRYVNHPADFCHKLPDNVSLEEGA 143 (343)
T ss_pred ccccCCCCChhHhCcCcccCcCcccc--ccccCC-------------------CceeeeEEecHHHcEECcCCCCHHHhh
Confidence 99999999999999999999865420 000112 489999999999999999999999998
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+ .++.+|++++ ....+++|++|||.|+|++|++++|+|+++|+++|+++.+++++.+.++++|+++++++++ .+
T Consensus 144 ~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~ 218 (343)
T cd05285 144 LV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT---ED 218 (343)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc---cc
Confidence 77 4788999875 7889999999999988999999999999999944999998999999999999999998776 45
Q ss_pred H---HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCc
Q 017457 243 V---SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP 317 (371)
Q Consensus 243 ~---~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~ 317 (371)
+ .+.+.+++++ ++|++|||+|+...++..+++++++ |+++.+|..... ..++...+. .++++.+....
T Consensus 219 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~---- 291 (343)
T cd05285 219 TPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPE--VTLPLSAASLREIDIRGVFRY---- 291 (343)
T ss_pred chhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--CccCHHHHhhCCcEEEEeccC----
Confidence 3 7778888877 8999999999875589999999998 999999864322 233333333 36777765322
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc--eeeEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCII 365 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvv 365 (371)
.+.+++++++++++.+.+.+++.+.|+++++++|++.+.+++ .+|+++
T Consensus 292 ~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 256888999999998765555678999999999999998875 369887
No 55
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=4.4e-40 Score=307.16 Aligned_cols=298 Identities=18% Similarity=0.221 Sum_probs=246.0
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCC-cCCCCEEeeccCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEE-VKERDLVLPIFHR 86 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~-~~~Gd~V~~~~~~ 86 (371)
.+++.+.|.|+|+++||+||+.++++|++|++...|.++... .+|.++|||++|+|+++|+++++ |++||+|++...
T Consensus 17 ~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~-~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~- 94 (324)
T cd08291 17 ELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTK-ALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG- 94 (324)
T ss_pred EEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-
Confidence 478888999999999999999999999999999988765322 57889999999999999999996 999999965321
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.+ |+|++|+.++++.++++|+++++++++.+++
T Consensus 95 ----------------------------~~-------------------g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~ 127 (324)
T cd08291 95 ----------------------------SY-------------------GTYAEYAVADAQQCLPLPDGVSFEQGASSFV 127 (324)
T ss_pred ----------------------------CC-------------------CcchheeeecHHHeEECCCCCCHHHHhhhcc
Confidence 01 3899999999999999999999999998888
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIF-GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~-G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
.++|||. +...... ++++++|+ |+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++++ .++.
T Consensus 128 ~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~ 201 (324)
T cd08291 128 NPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFL 201 (324)
T ss_pred cHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHH
Confidence 9999975 4455555 56667665 54 9999999999999999 8999999999999999999999999877 7888
Q ss_pred HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC---chh
Q 017457 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK---PRS 319 (371)
Q Consensus 245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~---~~~ 319 (371)
+.+++++++ ++|++||++|+.. ....+++++++ |+++.+|.........++...++ ++.++.++....+. ..+
T Consensus 202 ~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (324)
T cd08291 202 EDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPE 279 (324)
T ss_pred HHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHH
Confidence 899998887 9999999999877 77889999998 99999986432222124344444 48899988765542 235
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
++++++++++ ++ +.+.++++|+|+++++|++.+.+++.. |+++
T Consensus 280 ~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~ 323 (324)
T cd08291 280 VVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMSTGKKLL 323 (324)
T ss_pred HHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCCCeEEe
Confidence 6788888887 64 445688999999999999999886654 8886
No 56
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.9e-39 Score=303.58 Aligned_cols=332 Identities=23% Similarity=0.375 Sum_probs=264.9
Q ss_pred CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccc-cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWK-SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~-g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
++++..++++++.+.|+++++||+||+.++++|++|..... +........+|.++|+|++|+|+++|+++++|++||+|
T Consensus 2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence 45667789999999999999999999999999999987763 33221111457789999999999999999999999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPR-DGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 159 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~ 159 (371)
++.+...|++|.+|..+..+.|..+.. .+... + ....|+|++|+.++++.++++|+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~---------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF---------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccc---eeecccc---------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 999999999999999999999987643 22100 0 0012499999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457 160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
+++. ..++++||+++...... ++++|||.|+|.+|++++|+|+++|+++|+++++++++.+.++++|+++++++++
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 9876 46888999876555555 8999999888999999999999999867999998899989889999999998765
Q ss_pred CccHHHHHHHhh-CC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC
Q 017457 240 DKTVSQVIKEMT-DG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK 316 (371)
Q Consensus 240 ~~~~~~~i~~~~-~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 316 (371)
.++ .++. .+ ++|+++|+.++...+..++++|+++ |+++.+|... .....+...++ +++++.+...
T Consensus 220 -~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~~~---- 287 (339)
T cd08232 220 -DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLG--GPVPLPLNALVAKELDLRGSFR---- 287 (339)
T ss_pred -hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC--CCccCcHHHHhhcceEEEEEec----
Confidence 332 2222 22 6999999999766589999999998 9999998533 22333333333 3677777642
Q ss_pred chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 317 PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 317 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
..+.+++++++++++.+.+..++.+.|+++++++|++.+.+++.. |+++++
T Consensus 288 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 288 FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 135688899999999887666677999999999999999876654 988764
No 57
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.2e-39 Score=302.21 Aligned_cols=324 Identities=29% Similarity=0.505 Sum_probs=271.1
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+++.+.|.|++.++||+|+|.++++|+.|+....+.++.. .+|.++|+|++|+|+++|++++.|++||+|+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~--~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 87 (337)
T cd08261 10 GRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA--SYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI 87 (337)
T ss_pred CceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC--CCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCC
Confidence 358888999999999999999999999999999988876554 567889999999999999999999999999998888
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|..|+.+.++.|..-.. .++... |+|++|+.++++ ++++|+++++++++.+ .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~ 143 (337)
T cd08261 88 SCGECYACRKGRPNCCENLQV---LGVHRD-------------------GGFAEYIVVPAD-ALLVPEGLSLDQAALV-E 143 (337)
T ss_pred CCCCChhhhCcCcccCCCCCe---eeecCC-------------------CcceeEEEechh-eEECCCCCCHHHhhhh-c
Confidence 999999999999999953221 222222 489999999999 9999999999999877 4
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
.+.++++++ ...++++|++|||+|+|.+|++++|+|+.+|+ +|+++.+++++.+.++++|+++++++++ .++.+.
T Consensus 144 ~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~ 218 (337)
T cd08261 144 PLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD---EDVAAR 218 (337)
T ss_pred hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHH
Confidence 778888865 77889999999999889999999999999999 8999988999999999999999999887 678888
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 324 (371)
+.+++++ ++|++||++++...+..++++++++ |+++.+|... ....++...+.. ++++.+.. ....+.++++
T Consensus 219 l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 292 (337)
T cd08261 219 LRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSK--GPVTFPDPEFHKKELTILGSR---NATREDFPDV 292 (337)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCC--CCCccCHHHHHhCCCEEEEec---cCChhhHHHH
Confidence 8888877 8999999998866689999999998 9999998643 223344444443 67777653 2234578889
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc-ee-eEEEEe
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK-SL-RCIIWM 367 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~-kvvv~~ 367 (371)
+++++++.+.+.+.+...+++++++++++.+.+++ .. |+++++
T Consensus 293 ~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 293 IDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 99999998876334668999999999999998873 54 888864
No 58
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=4.2e-39 Score=302.88 Aligned_cols=326 Identities=29% Similarity=0.470 Sum_probs=271.4
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
+.+.+++.+.|++.+++|+||+.++++|+.|+.+..|.+... ..|.++|+|++|+|+++|++++.+++||+|++.+..
T Consensus 10 ~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~--~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 87 (343)
T cd08235 10 NDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDL--KPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHV 87 (343)
T ss_pred CceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccC--CCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCC
Confidence 358888999999999999999999999999999988876422 457789999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce-----eEECCCCCCcchh
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH-----VVKITPHIPLGIA 161 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~-----~~~~P~~l~~~~a 161 (371)
.|++|++|..+++++|..... .|.... |+|++|+.+++++ ++++|+++++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~a 145 (343)
T cd08235 88 PCGECHYCLRGNENMCPNYKK---FGNLYD-------------------GGFAEYVRVPAWAVKRGGVLKLPDNVSFEEA 145 (343)
T ss_pred CCCCChHHHCcCcccCCCcce---eccCCC-------------------CcceeeEEecccccccccEEECCCCCCHHHH
Confidence 999999999999999976543 333333 4999999999998 9999999999999
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
+.+ +.+.+||+++. ...+++|++|||+|+|.+|++++++|+++|++.|+++.+++++.+.++++|+++++++++ .
T Consensus 146 a~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~ 220 (343)
T cd08235 146 ALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---E 220 (343)
T ss_pred Hhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---c
Confidence 876 68899999764 458999999999988999999999999999933999999999999998999999998887 7
Q ss_pred cHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchh
Q 017457 242 TVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 242 ~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~ 319 (371)
++.+.+.+++++ ++|++||++++...+..++++++++ |+++.++.........++...+. .+.++.++.... .+
T Consensus 221 ~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~ 296 (343)
T cd08235 221 DLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAAS---PE 296 (343)
T ss_pred CHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCC---hh
Confidence 888888888877 8999999999775589999999998 99999986433222334433333 366776654222 35
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCII 365 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 365 (371)
.+++++++++++.+.+..++...|++++++++++.+.+++..|+++
T Consensus 297 ~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~vi 342 (343)
T cd08235 297 DYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLKIVI 342 (343)
T ss_pred hHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEEEEe
Confidence 6888999999998765444668999999999999998877338775
No 59
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-39 Score=303.30 Aligned_cols=323 Identities=28% Similarity=0.392 Sum_probs=267.7
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.++.++++++.|.|++.++||+||+.++++|++|++...|.++.. .+|.++|||++|+|+++|+.++.+++||+|++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~ 85 (334)
T PRK13771 8 GFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM--KYPVILGHEVVGTVEEVGENVKGFKPGDRVASL 85 (334)
T ss_pred CCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC--CCCeeccccceEEEEEeCCCCccCCCCCEEEEC
Confidence 344459999999999999999999999999999999888876543 567899999999999999999889999999998
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
....|++|++|..+.++.|..... .|....| +|++|+.++.+.++++|+++++.+++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~~a~ 143 (334)
T PRK13771 86 LYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG-------------------FFAEYAKVKVTSLVKVPPNVSDEGAVI 143 (334)
T ss_pred CCCCCcCChhhcCCCcccCccccc---cccccCc-------------------eeeeeeecchhceEECCCCCCHHHhhc
Confidence 888999999999999999987543 3433333 899999999999999999999999999
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
+++.+.+||+++... .++++++|||+|+ |.+|++++++|+++|+ +|+++++++++++.++++ ++++++.+ +
T Consensus 144 l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~ 215 (334)
T PRK13771 144 VPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-----K 215 (334)
T ss_pred ccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-----h
Confidence 999999999987555 8999999999998 9999999999999999 899999999999999888 77776543 3
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~ 321 (371)
+.+.++++ +++|+++|++|+.. ...++++++++ |+++.+|.............. +.++.++.+... ..++++
T Consensus 216 ~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 288 (334)
T PRK13771 216 FSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDV 288 (334)
T ss_pred HHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecC---CCHHHH
Confidence 45555554 37999999999876 88999999998 999999974332221233322 334788887632 235679
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
++++++++++.+. ..+++.|+++++++|++.+.+++.. |+++..
T Consensus 289 ~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 289 EEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999765 3366899999999999999886654 888754
No 60
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=7e-39 Score=301.08 Aligned_cols=335 Identities=27% Similarity=0.450 Sum_probs=271.0
Q ss_pred CccCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEE
Q 017457 2 QRIPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLV 80 (371)
Q Consensus 2 ~~~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V 80 (371)
...|+..+++++.|.|+|.++||+||+.++++|+.|..++.+.. ......+|.++|+|++|+|+++|+++++|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 46788889999999999999999999999999999998765532 11111456789999999999999999999999999
Q ss_pred eeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch
Q 017457 81 LPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI 160 (371)
Q Consensus 81 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~ 160 (371)
+..+...|+.|..|..+..+.|...+. .|+... |+|++|+.++++.++++|+++++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~ 141 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTD-------------------GCFAEYAVVPAQNIWKNPKSIPPEY 141 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce---EeecCC-------------------CcceeEEEeehHHcEECcCCCChHh
Confidence 999999999999999999999988653 333333 3899999999999999999999865
Q ss_pred hhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 161 ACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 161 aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
+ +++..+.+|++++ ....++|++|+|.|+|++|++++|+|+++|+++|+++++++++.+.++++|++++++++.
T Consensus 142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--- 215 (340)
T TIGR00692 142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--- 215 (340)
T ss_pred h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc---
Confidence 5 4666888888865 345789999999888999999999999999944888888888999999999998998876
Q ss_pred ccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchh
Q 017457 241 KTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRS 319 (371)
Q Consensus 241 ~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 319 (371)
.++.+.+.+++++ ++|++||++++...+...+++++++ |+++.+|.........+....++.+.++.+.... ...+
T Consensus 216 ~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 292 (340)
T TIGR00692 216 EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGR--HMFE 292 (340)
T ss_pred cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEecC--Cchh
Confidence 6788888888776 8999999988766689999999998 9999998642222222221223336667665411 1234
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~~ 367 (371)
.+.+++++++++++.+.+++.+.+++++++++++.+.+++.+|+++.+
T Consensus 293 ~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 293 TWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred hHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 578899999999887555567999999999999998877656888764
No 61
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=4.8e-39 Score=305.90 Aligned_cols=339 Identities=26% Similarity=0.358 Sum_probs=268.8
Q ss_pred cCCCCcEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEee
Q 017457 4 IPGKPLVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLP 82 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~ 82 (371)
.+..+++++++|+|+| +++||+|||+++++|++|++...|.++ . .+|.++|||++|+|+++|+.++.+++||+|++
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~--~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 83 (375)
T cd08282 7 GGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-A--EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVV 83 (375)
T ss_pred ecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-C--CCCceeccccEEEEEEeCCCCCcCCCCCEEEE
Confidence 3445688999999986 799999999999999999999988765 2 56889999999999999999999999999999
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc--eeEECCCCCCcc-
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT--HVVKITPHIPLG- 159 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~--~~~~~P~~l~~~- 159 (371)
.+...|+.|..|+.+..++|...... .+....| .++. ....|+|++|+.++.+ .++++|+++++.
T Consensus 84 ~~~~~~g~~~~c~~~~~~~~~~~~~~--~~~~~~~--~~~~--------~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~ 151 (375)
T cd08282 84 PFNVACGRCRNCKRGLTGVCLTVNPG--RAGGAYG--YVDM--------GPYGGGQAEYLRVPYADFNLLKLPDRDGAKE 151 (375)
T ss_pred eCCCCCCCCHHHHCcCcccCCCCCcc--ccccccc--cccc--------CCCCCeeeeEEEeecccCcEEECCCCCChhh
Confidence 99999999999999999999753211 0000000 0000 0012589999999976 899999999998
Q ss_pred --hhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457 160 --IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237 (371)
Q Consensus 160 --~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 237 (371)
+++.+.+.+.|||+++ ...++++|++|||.|+|++|++++|+|+++|+.+|+++++++++.+.++++|+. .+++++
T Consensus 152 ~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~ 229 (375)
T cd08282 152 KDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD 229 (375)
T ss_pred hhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc
Confidence 5677888999999987 778899999999988899999999999999986788999999999999999984 566665
Q ss_pred CCCccHHHHHHHhhCCCcCEEEECCCChH-----------HHHHHHHHhhcCCceEEEECccCCCC-----------cee
Q 017457 238 CGDKTVSQVIKEMTDGGADYCFECIGLTS-----------VMNDAFNSSREGWGKTVILGVEMHGS-----------PIS 295 (371)
Q Consensus 238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~-----------~~~~~~~~l~~~~G~~v~~g~~~~~~-----------~~~ 295 (371)
+++.+.+.+++++++|+++||+|+.. .+..++++++++ |+++.+|...... ...
T Consensus 230 ---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~ 305 (375)
T cd08282 230 ---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELS 305 (375)
T ss_pred ---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccCcccc
Confidence 67888888877668999999998762 478999999998 9998887632211 123
Q ss_pred cCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 296 LNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 296 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
++...+.. +.++.+.... ..+.+..++++++++++.+..++++.|+++++++|++.+.+++..|+++.
T Consensus 306 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~kvvv~ 374 (375)
T cd08282 306 FDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRLETKVVIK 374 (375)
T ss_pred ccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCCceEEEeC
Confidence 34444443 5555554321 24567889999999988765557799999999999999988874488875
No 62
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=9.8e-39 Score=302.78 Aligned_cols=330 Identities=23% Similarity=0.424 Sum_probs=261.5
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
.+.+++++.+.|+|.++||+||+.++++|++|++...+.... ....+|.++|||++|+|+++|+++++|++||+|++.+
T Consensus 26 ~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 105 (364)
T PLN02702 26 VNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEP 105 (364)
T ss_pred CCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcC
Confidence 345888888888899999999999999999999988763211 1113577899999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
...|++|..|..+..+.|..... ++... ..|+|++|+.++.+.++++|+++++.+++..
T Consensus 106 ~~~~~~c~~c~~g~~~~c~~~~~---~~~~~------------------~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~ 164 (364)
T PLN02702 106 GISCWRCNLCKEGRYNLCPEMKF---FATPP------------------VHGSLANQVVHPADLCFKLPENVSLEEGAMC 164 (364)
T ss_pred CCCCCCCcchhCcCcccCCCccc---cCCCC------------------CCCcccceEEcchHHeEECCCCCCHHHHhhh
Confidence 99999999999999999975331 11110 1249999999999999999999999988753
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
. .+.++++++ ...++.++++|||+|+|++|++++++|+++|+..|+++++++++.+.++++|++.++++.. ...++.
T Consensus 165 ~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~ 241 (364)
T PLN02702 165 E-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST-NIEDVE 241 (364)
T ss_pred h-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCc-ccccHH
Confidence 2 445577765 6788999999999988999999999999999966888888999999999999988776432 014566
Q ss_pred HHHHHh---hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhh
Q 017457 245 QVIKEM---TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSD 320 (371)
Q Consensus 245 ~~i~~~---~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~ 320 (371)
+.+.++ +++++|++||++|+...+..++++++++ |+++.+|.... ...+....+. .++++.++... ...
T Consensus 242 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~ 314 (364)
T PLN02702 242 SEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHN--EMTVPLTPAAAREVDVVGVFRY----RNT 314 (364)
T ss_pred HHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCC--CCcccHHHHHhCccEEEEeccC----hHH
Confidence 666554 2348999999999766689999999998 99999986422 2233333333 37888886432 246
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEec--ccHHHHHHHHhcCcee-eEEEE
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSF--HDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
++.++++++++++.+.+++++.|++ +++++|++.+.+++.. |+++.
T Consensus 315 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 315 WPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred HHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 7889999999988765566788666 7999999998887655 88874
No 63
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=6.6e-39 Score=307.29 Aligned_cols=332 Identities=20% Similarity=0.208 Sum_probs=268.4
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC--------CCCCCC-ccccccccEEEEEeCCCCCCcCCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL--------PKLPLP-VIFGHEAVGVVESVGEYVEEVKER 77 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~--------~~~~~p-~~~G~e~~G~Vv~vG~~v~~~~~G 77 (371)
..+++.+.|.|+|+++||+||+.++++|++|.+...+.... .....| .++|||++|+|+++|+.++.+++|
T Consensus 23 ~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~G 102 (398)
T TIGR01751 23 QAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVG 102 (398)
T ss_pred cceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCC
Confidence 45899999999999999999999999999998776554210 000123 379999999999999999999999
Q ss_pred CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCC
Q 017457 78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP 157 (371)
Q Consensus 78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~ 157 (371)
|+|++.+...|++|++|..+.+++|..... .|+.. ..|+|++|+.+++++++++|++++
T Consensus 103 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~------------------~~g~~ae~~~v~~~~~~~vP~~l~ 161 (398)
T TIGR01751 103 DEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYET------------------NFGSFAEFALVKDYQLMPKPKHLT 161 (398)
T ss_pred CEEEEccccccCCchhhccCcccccccccc---ccccC------------------CCccceEEEEechHHeEECCCCCC
Confidence 999999999999999999999999965431 22211 124999999999999999999999
Q ss_pred cchhhccccchhhhHHHHHH--HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc
Q 017457 158 LGIACLLSCGVSTGVGAAWK--VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN 234 (371)
Q Consensus 158 ~~~aa~~~~~~~ta~~~l~~--~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~ 234 (371)
+++++.+.+++.|||+++.. ..++.+|++|||+|+ |++|++++++|+++|+ +++++++++++.+.++++|++.++|
T Consensus 162 ~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~~~~~~~~~~~~g~~~~v~ 240 (398)
T TIGR01751 162 WEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVSSPEKAEYCRELGAEAVID 240 (398)
T ss_pred HHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCCEEec
Confidence 99999999999999998654 467899999999998 9999999999999999 7888888999999999999999998
Q ss_pred CCCCC-------------------CccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce
Q 017457 235 PATCG-------------------DKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI 294 (371)
Q Consensus 235 ~~~~~-------------------~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~ 294 (371)
+++.+ ...+.+.+.+++++ ++|++|||+|... +..++++++++ |+++.+|.... ...
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~ 317 (398)
T TIGR01751 241 RNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRG-GMVVICGGTTG-YNH 317 (398)
T ss_pred CCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccC-CEEEEEccccC-CCC
Confidence 75421 01355667778876 8999999999755 88999999998 99999987432 223
Q ss_pred ecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457 295 SLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 368 (371)
Q Consensus 295 ~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~ 368 (371)
.++...+.. +.++.++.+.. ..++++++++++++++.. .+++++++++++++++.+.+++.. |+++.+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 318 DYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred CcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 344444433 66777765433 345788999999997763 367999999999999999887765 8888764
No 64
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.7e-39 Score=302.58 Aligned_cols=301 Identities=20% Similarity=0.239 Sum_probs=241.2
Q ss_pred CcEEEEE---ecC-CCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccc--cccEEEEEeCCCCCCcCCCCEEe
Q 017457 8 PLVIEEI---EVE-PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGH--EAVGVVESVGEYVEEVKERDLVL 81 (371)
Q Consensus 8 ~l~~~~~---~~~-~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~--e~~G~Vv~vG~~v~~~~~Gd~V~ 81 (371)
.|++++. +.| ++++||||||+.|+++|+.|...+.+..... ..|.++|+ |++|+|..+|+++++|++||+|.
T Consensus 26 ~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~--~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~ 103 (348)
T PLN03154 26 DMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSY--LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLIS 103 (348)
T ss_pred cEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCC--CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEE
Confidence 3777774 555 4589999999999999998875443322222 35788998 88999999999999999999994
Q ss_pred eccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce--eEE--CCCCCC
Q 017457 82 PIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH--VVK--ITPHIP 157 (371)
Q Consensus 82 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~--~P~~l~ 157 (371)
.. |+|+||+.++.+. +++ +|++++
T Consensus 104 ~~----------------------------------------------------~~~aey~~v~~~~~~~~~~~~P~~~~ 131 (348)
T PLN03154 104 GI----------------------------------------------------TGWEEYSLIRSSDNQLRKIQLQDDIP 131 (348)
T ss_pred ec----------------------------------------------------CCcEEEEEEeccccceEEccCcCCCC
Confidence 31 3799999998753 544 589999
Q ss_pred cc-hhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEc
Q 017457 158 LG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFIN 234 (371)
Q Consensus 158 ~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~ 234 (371)
+. +++.++++++|||+++....++++|++|||+|+ |++|++++|+||++|+ +|+++++++++.+.++ ++|++++++
T Consensus 132 ~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~ 210 (348)
T PLN03154 132 LSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFN 210 (348)
T ss_pred HHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEE
Confidence 86 688899999999998877888999999999998 9999999999999999 8999999999999987 799999999
Q ss_pred CCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc----eecCHHHHhc-CceEEE
Q 017457 235 PATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIEILK-GRSVCG 309 (371)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~~-~~~~~g 309 (371)
+++ ..++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|....... ..++...++. ++++.|
T Consensus 211 ~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g 286 (348)
T PLN03154 211 YKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG 286 (348)
T ss_pred CCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence 864 136777788877668999999999865 89999999998 99999996432210 0123334443 788998
Q ss_pred eeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 310 TYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 310 ~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
+....+. ..+.++++++++++|++.+ .++.+|+|+++++|++.+.+++.. |+++.+.+
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~ 347 (348)
T PLN03154 287 FLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKNVGKQVIRVAK 347 (348)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCCCceEEEEecC
Confidence 8654332 1345788999999998764 366789999999999999998765 99998754
No 65
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.7e-38 Score=297.14 Aligned_cols=325 Identities=27% Similarity=0.454 Sum_probs=275.0
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-C
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF-H 85 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-~ 85 (371)
..+++++.+.|.|.++||+||+.++++|++|..+..|.++... ..|.++|+|++|+|+++|++++.+++||+|+..+ .
T Consensus 12 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~ 90 (341)
T cd08297 12 KPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKP-KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLY 90 (341)
T ss_pred CCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCC-CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCC
Confidence 3689999999999999999999999999999998888764321 4566899999999999999999999999999876 4
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
..|+.|.+|..++.++|..... .|+...| +|++|+.++++.++++|+++++.+++.++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~ 148 (341)
T cd08297 91 DACGKCEYCRTGDETLCPNQKN---SGYTVDG-------------------TFAEYAIADARYVTPIPDGLSFEQAAPLL 148 (341)
T ss_pred CCCCCCccccCCCcccCCCccc---cccccCC-------------------cceeEEEeccccEEECCCCCCHHHHHHHH
Confidence 6799999999999999987654 4554444 89999999999999999999999999999
Q ss_pred cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++++++++. .++.
T Consensus 149 ~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~ 223 (341)
T cd08297 149 CAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK---SDDV 223 (341)
T ss_pred cchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHH
Confidence 999999997654 58999999999998 7799999999999999 8999999999999999999999998877 6788
Q ss_pred HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+.+++++ ++|+++|+.++......++++++++ |+++.+|... ....+++...+.. +.++.+.... ..++++
T Consensus 224 ~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 298 (341)
T cd08297 224 EAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPP-GGFIPLDPFDLVLRGITIVGSLVG---TRQDLQ 298 (341)
T ss_pred HHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCC-CCCCCCCHHHHHhcccEEEEeccC---CHHHHH
Confidence 888888876 8999999777666689999999998 9999998643 2233455444434 7788875332 246789
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
+++++++++++.+ .+ ..|++++++++++.+.++... |++++|
T Consensus 299 ~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 299 EALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999999997754 34 679999999999999887665 888865
No 66
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.1e-38 Score=299.73 Aligned_cols=316 Identities=20% Similarity=0.351 Sum_probs=253.6
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCC---------CCCCCCCccccccccEEEEEeCCCCCC-cCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTD---------LPKLPLPVIFGHEAVGVVESVGEYVEE-VKER 77 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~---------~~~~~~p~~~G~e~~G~Vv~vG~~v~~-~~~G 77 (371)
.+++++.+.|+|.++||+|++.++++|+.|++...|... .....+|.++|+|++|+|+++|+++++ |++|
T Consensus 10 ~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~G 89 (341)
T cd08262 10 PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVG 89 (341)
T ss_pred ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCC
Confidence 688899999999999999999999999999998887321 001145788999999999999999987 9999
Q ss_pred CEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCC
Q 017457 78 DLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIP 157 (371)
Q Consensus 78 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~ 157 (371)
|+|++.+...|++|..|..+.. -... |+|++|+.++.++++++|++++
T Consensus 90 d~V~~~~~~~~~~~~~~~~~~~-------------~~~~-------------------g~~~~~~~v~~~~~~~lP~~~s 137 (341)
T cd08262 90 TRVTSLPLLLCGQGASCGIGLS-------------PEAP-------------------GGYAEYMLLSEALLLRVPDGLS 137 (341)
T ss_pred CEEEecCCcCCCCChhhhCCCC-------------cCCC-------------------CceeeeEEechHHeEECCCCCC
Confidence 9999999999999999932110 0112 4899999999999999999999
Q ss_pred cchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457 158 LGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237 (371)
Q Consensus 158 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 237 (371)
+++++ ++.++++||++ ....++++|++|||+|+|++|++++|+|+++|++.++++++++++.+.++++|+++++++++
T Consensus 138 ~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~ 215 (341)
T cd08262 138 MEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAA 215 (341)
T ss_pred HHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCC
Confidence 99887 55688999997 57788999999999988999999999999999966888888899999999999999998765
Q ss_pred CCCccHHH---HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeec
Q 017457 238 CGDKTVSQ---VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYF 312 (371)
Q Consensus 238 ~~~~~~~~---~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~ 312 (371)
.+..+ .+.+.+.+ ++|++||++++...+..++++++++ |+++.+|....... +.... +.++.++.++..
T Consensus 216 ---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~--~~~~~~~~~~~~~~~~~~ 289 (341)
T cd08262 216 ---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDN--IEPALAIRKELTLQFSLG 289 (341)
T ss_pred ---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCc--cCHHHHhhcceEEEEEec
Confidence 32211 34445555 8999999999854588899999998 99999986432221 22222 334667765432
Q ss_pred cCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 313 GGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
. ..+++.+++++++++.+.+.+++++.+++++++++++.+.+++.. |++++
T Consensus 290 ~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 290 Y---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred c---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2 235788999999999888666667999999999999999887765 88763
No 67
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.4e-38 Score=296.90 Aligned_cols=322 Identities=27% Similarity=0.461 Sum_probs=271.4
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 88 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 88 (371)
+.+.+.|.|.+.+++|+|++.++++|+.|.....|.++... .+|.++|+|++|+|+++|++++++++||+|++.+..+|
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~ 92 (338)
T cd08254 14 LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT-KLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPC 92 (338)
T ss_pred eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccC-CCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCC
Confidence 57778888999999999999999999999999888775322 56789999999999999999999999999999999999
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457 89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168 (371)
Q Consensus 89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (371)
+.|++|..+..++|..... .|.... |+|++|+.++.+.++++|+++++.+++.++.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~ 150 (338)
T cd08254 93 GACALCRRGRGNLCLNQGM---PGLGID-------------------GGFAEYIVVPARALVPVPDGVPFAQAAVATDAV 150 (338)
T ss_pred CCChhhhCcCcccCCCCCc---cccccC-------------------CcceeeEEechHHeEECCCCCCHHHhhhhcchH
Confidence 9999999999999965442 344333 389999999999999999999999999999999
Q ss_pred hhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHH
Q 017457 169 STGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIK 248 (371)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~ 248 (371)
.|||+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++..+ ..+.+.+
T Consensus 151 ~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~- 225 (338)
T cd08254 151 LTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK- 225 (338)
T ss_pred HHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-
Confidence 9999988777789999999998889999999999999999 8999999999999999999999888766 5566666
Q ss_pred HhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHH
Q 017457 249 EMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQ 326 (371)
Q Consensus 249 ~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~ 326 (371)
+.+.+ ++|+++|+++....+..++++++++ |+++.+|.... ...++...+.. +.++.++... ..+.+..+++
T Consensus 226 ~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 299 (338)
T cd08254 226 AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRD--KLTVDLSDLIARELRIIGSFGG---TPEDLPEVLD 299 (338)
T ss_pred HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCC--CCccCHHHHhhCccEEEEeccC---CHHHHHHHHH
Confidence 55555 8999999998776689999999998 99999986432 23344444444 6777776432 2467888999
Q ss_pred HHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 327 KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
+++++.+.+. .+.+++++++++++.+.+++.. |+++.+
T Consensus 300 ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 300 LIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 9999987654 4789999999999999887765 888763
No 68
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.9e-38 Score=298.28 Aligned_cols=330 Identities=31% Similarity=0.476 Sum_probs=264.2
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCC-CCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSST-DLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~-~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
++..+++.+.+.|+|.++||+||+.++++|+.|..++.+.. ......+|.++|+|++|+|+.+|++++.+++||+|+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~ 88 (341)
T cd05281 9 AGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAE 88 (341)
T ss_pred CCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 44468999999999999999999999999999988755431 11111456789999999999999999999999999999
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
+.++||+|.+|..+.+++|...+. .|.... |+|++|++++.+.++++|++++++.+ +
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~v~v~~~~~~~lP~~~~~~~a-~ 145 (341)
T cd05281 89 THIVCGKCYQCRTGNYHVCQNTKI---LGVDTD-------------------GCFAEYVVVPEENLWKNDKDIPPEIA-S 145 (341)
T ss_pred CccCCCCChHHHCcCcccCcccce---EeccCC-------------------CcceEEEEechHHcEECcCCCCHHHh-h
Confidence 999999999999999999975432 232222 48999999999999999999998554 5
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+..++.++++++. ...++|++|||.|+|.+|++++++|+++|+++|+++++++++.+.++++|++++++.+. .++
T Consensus 146 ~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~ 220 (341)
T cd05281 146 IQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE---EDV 220 (341)
T ss_pred hhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc---ccH
Confidence 5557888888654 45678999999888999999999999999866888888889999999999999988766 677
Q ss_pred HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHH
Q 017457 244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
. .+.+++++ ++|++||++|+......++++++++ |+++.+|.........+....++.+..+.+..... ..+.++
T Consensus 221 ~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 296 (341)
T cd05281 221 V-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK--MFETWY 296 (341)
T ss_pred H-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--cchhHH
Confidence 7 78888876 9999999999877689999999998 99999986432211222222233467777664221 134678
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
+++++++++.+.+.+++.+.++++++++||+.+.+++.+|++++
T Consensus 297 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~ 340 (341)
T cd05281 297 QVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLY 340 (341)
T ss_pred HHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEec
Confidence 89999999988766667788999999999999988773488875
No 69
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=3.4e-38 Score=296.14 Aligned_cols=324 Identities=27% Similarity=0.411 Sum_probs=264.5
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF- 84 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~- 84 (371)
+....+++.|.|+|.++||+|||.++++|++|++...|..+. ..|.++|||++|+|+++|++++.|++||+|++.+
T Consensus 10 ~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~ 86 (338)
T PRK09422 10 HTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWF 86 (338)
T ss_pred CCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC---CCCccCCcccceEEEEECCCCccCCCCCEEEEccC
Confidence 333338899999999999999999999999999988886532 2467899999999999999999999999998654
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
...|+.|.+|..+.++.|..... .|+..+| +|++|+.++.++++++|+++++.+++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~aa~l 144 (338)
T PRK09422 87 FEGCGHCEYCTTGRETLCRSVKN---AGYTVDG-------------------GMAEQCIVTADYAVKVPEGLDPAQASSI 144 (338)
T ss_pred CCCCCCChhhcCCCcccCCCccc---cCccccC-------------------cceeEEEEchHHeEeCCCCCCHHHeehh
Confidence 46799999999999999976552 4444444 9999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARL-NRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~-~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
++.+.|||+++ ....+++|++|||+|+|++|++++++|+. +|+ +|+++++++++++.++++|++.+++++. ..++
T Consensus 145 ~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~ 220 (338)
T PRK09422 145 TCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR--VEDV 220 (338)
T ss_pred hcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc--cccH
Confidence 99999999976 77889999999999999999999999998 599 8999999999999999999999988743 1356
Q ss_pred HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 322 (371)
.+.+++.++ ++|.++.+.++...+..++++++++ |+++.+|.... ...++...+.. +.++.++.... .++++
T Consensus 221 ~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 293 (338)
T PRK09422 221 AKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPE--SMDLSIPRLVLDGIEVVGSLVGT---RQDLE 293 (338)
T ss_pred HHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCC--CceecHHHHhhcCcEEEEecCCC---HHHHH
Confidence 677777766 6885554445555599999999998 99999986422 23444444333 67777654322 46788
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 368 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~ 368 (371)
++++++.++.+.. .+ ..++++++++|++.+.++... |+++.+.
T Consensus 294 ~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 294 EAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 9999999997653 35 568999999999999887765 8888653
No 70
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4.5e-39 Score=276.84 Aligned_cols=306 Identities=24% Similarity=0.314 Sum_probs=249.5
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
+|.+.+++++.++|....++|+||.+|++||++|+-.++|.|+..+ ++|.+-|+|++|+|+.+|++++.|++||+|+..
T Consensus 30 dP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP-~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~ 108 (354)
T KOG0025|consen 30 DPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRP-ELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPL 108 (354)
T ss_pred CchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCC-CCCcccCCcceEEEEEecCCcCccCCCCeEeec
Confidence 4667789999999988888899999999999999999999998775 899999999999999999999999999999775
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhc
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACL 163 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~ 163 (371)
.. +.|+|++|.+.+++.++++++.++++.||+
T Consensus 109 ~a------------------------------------------------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT 140 (354)
T KOG0025|consen 109 SA------------------------------------------------NLGTWRTEAVFSESDLIKVDKDIPLASAAT 140 (354)
T ss_pred CC------------------------------------------------CCccceeeEeecccceEEcCCcCChhhhhe
Confidence 43 236999999999999999999999999999
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH----HHHHhCcceEEcCCCC
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE----IGKKFGITDFINPATC 238 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~----~~~~lga~~v~~~~~~ 238 (371)
+.++.+|||++|....++.+|++|+-.|+ +++|++.+|+||++|+ +.|-+.++....+ .++.+||++|+..++.
T Consensus 141 ~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel 219 (354)
T KOG0025|consen 141 LSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEEL 219 (354)
T ss_pred eccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHh
Confidence 99999999999999999999999999998 9999999999999999 5666655554444 3566999999965542
Q ss_pred CCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC
Q 017457 239 GDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK 316 (371)
Q Consensus 239 ~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~ 316 (371)
.+.+... ..... .+.+.|||+|+.. ...+.+.|.++ |+++.+|.. +.++..++...++ +++.+.|+++..|.
T Consensus 220 ~~~~~~k---~~~~~~~prLalNcVGGks-a~~iar~L~~G-gtmvTYGGM-SkqPv~~~ts~lIFKdl~~rGfWvt~W~ 293 (354)
T KOG0025|consen 220 RDRKMKK---FKGDNPRPRLALNCVGGKS-ATEIARYLERG-GTMVTYGGM-SKQPVTVPTSLLIFKDLKLRGFWVTRWK 293 (354)
T ss_pred cchhhhh---hhccCCCceEEEeccCchh-HHHHHHHHhcC-ceEEEecCc-cCCCcccccchheeccceeeeeeeeehh
Confidence 2222211 11122 7899999999988 77899999998 999999984 4456666665554 49999999988876
Q ss_pred ch--------hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCc--eeeEEEEe
Q 017457 317 PR--------SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGK--SLRCIIWM 367 (371)
Q Consensus 317 ~~--------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~--~~kvvv~~ 367 (371)
.. +.+.++.++++.|++..+ -....+|++...|++...+.- ..|-++.+
T Consensus 294 ~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 294 KEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred hccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 31 345778899999987655 336789999999988776533 23555544
No 71
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=1.4e-38 Score=298.71 Aligned_cols=303 Identities=20% Similarity=0.229 Sum_probs=242.7
Q ss_pred CCCCcEEEEEec----CCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccc--cEEEEEeCCCCCCcCCCC
Q 017457 5 PGKPLVIEEIEV----EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEA--VGVVESVGEYVEEVKERD 78 (371)
Q Consensus 5 ~~~~l~~~~~~~----~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~--~G~Vv~vG~~v~~~~~Gd 78 (371)
+.+.|++++.++ |+|+++||||||+|++||+.|++...|..... ...|+++|++. .|++..+|+.++.|++||
T Consensus 17 ~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~-~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd 95 (338)
T cd08295 17 KESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSL-YLPPFKPGEVITGYGVAKVVDSGNPDFKVGD 95 (338)
T ss_pred CccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccc-cCCCcCCCCeEeccEEEEEEecCCCCCCCCC
Confidence 334688998887 88999999999999999999999888854321 14577888754 456666888888999999
Q ss_pred EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec-ceeEECC-CCC
Q 017457 79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKIT-PHI 156 (371)
Q Consensus 79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P-~~l 156 (371)
+|... |+|+||+++++ ..++++| +++
T Consensus 96 ~V~~~----------------------------------------------------g~~aey~~v~~~~~~~~lp~~~~ 123 (338)
T cd08295 96 LVWGF----------------------------------------------------TGWEEYSLIPRGQDLRKIDHTDV 123 (338)
T ss_pred EEEec----------------------------------------------------CCceeEEEecchhceeecCCCCC
Confidence 99431 38999999999 7999995 678
Q ss_pred Ccc-hhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEE
Q 017457 157 PLG-IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFI 233 (371)
Q Consensus 157 ~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~ 233 (371)
++. +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+++ +|+++++
T Consensus 124 ~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi 202 (338)
T cd08295 124 PLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAF 202 (338)
T ss_pred CHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeE
Confidence 887 788899999999998877889999999999998 9999999999999999 89999999999999998 9999999
Q ss_pred cCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc----eecCHHHHh-cCceEE
Q 017457 234 NPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP----ISLNSIEIL-KGRSVC 308 (371)
Q Consensus 234 ~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~----~~~~~~~~~-~~~~~~ 308 (371)
++.+ ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++.+|....... ...+...++ +++++.
T Consensus 203 ~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (338)
T cd08295 203 NYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQ 278 (338)
T ss_pred EcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHHhhccceee
Confidence 8654 136777787777669999999999855 89999999998 99999986332111 112233333 367888
Q ss_pred EeeccCCCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 309 GTYFGGLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 309 g~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
++....+.. .+.++++++++.+|++.+. +...|+++++++|++.+.+++.. |+++++
T Consensus 279 g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 279 GFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred EEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 765443321 2347788999999987754 34669999999999999887765 988864
No 72
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.4e-38 Score=294.78 Aligned_cols=307 Identities=21% Similarity=0.367 Sum_probs=254.6
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
..+++++++|.|+|.++||+||+.++++|++|.....|.++ +|.++|||++|+|+++|++ +++||+|...+.
T Consensus 9 ~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~-----~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~ 80 (319)
T cd08242 9 GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-----FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEIN 80 (319)
T ss_pred CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC-----CCCccCceEEEEEEEeCCC---CCCCCeEEECCC
Confidence 44689999999999999999999999999999998888653 5678999999999999998 689999999999
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNM-PRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
..|++|.+|..+..+.|...+. .++ ..+ |+|++|+.++.++++++|++++.++++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-------------------g~~~~~~~v~~~~~~~lP~~~~~~~aa~~ 138 (319)
T cd08242 81 IACGRCEYCRRGLYTHCPNRTV---LGIVDRD-------------------GAFAEYLTLPLENLHVVPDLVPDEQAVFA 138 (319)
T ss_pred cCCCCChhhhCcCcccCCCCcc---cCccCCC-------------------CceEEEEEechHHeEECcCCCCHHHhhhh
Confidence 9999999999999988886553 333 123 38999999999999999999999888764
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
....+++. +.+..+++++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++++. .
T Consensus 139 -~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~--- 209 (319)
T cd08242 139 -EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEA---E--- 209 (319)
T ss_pred -hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCccc---c---
Confidence 34556665 5577889999999999889999999999999999 7999999999999999999988877644 1
Q ss_pred HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH
Q 017457 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 322 (371)
+.+ ++|+++|++|+...+..++++++++ |+++..+.... ...++...+.. +.++.+.... .++
T Consensus 210 ------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~------~~~ 274 (319)
T cd08242 210 ------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAG--PASFDLTKAVVNEITLVGSRCG------PFA 274 (319)
T ss_pred ------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC--CCccCHHHheecceEEEEEecc------cHH
Confidence 233 8999999999866689999999998 99998765322 23444444443 6777776432 378
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCceeeEEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSLRCIIW 366 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv~ 366 (371)
+++++++++++++.+++++.|+++++++||+.+.++...|++++
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~ 318 (319)
T cd08242 275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLR 318 (319)
T ss_pred HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeC
Confidence 89999999988666667899999999999999987765698875
No 73
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.3e-38 Score=296.06 Aligned_cols=327 Identities=27% Similarity=0.467 Sum_probs=268.5
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+.+++.+.|+++++||+||+.++++|+.|+....+.+. . ..|.++|+|++|+|+++|++++.|++||+|+..+..
T Consensus 10 ~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~--~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~ 86 (343)
T cd08236 10 GDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-Y--HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLL 86 (343)
T ss_pred CceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-C--CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCC
Confidence 4588889999999999999999999999999998877652 2 457789999999999999999999999999999888
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|++|..+.++.|+.... .|.... |+|++|+.+++++++++|+++++++++.+ .
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~ 143 (343)
T cd08236 87 PCGKCEYCKKGEYSLCSNYDY---IGSRRD-------------------GAFAEYVSVPARNLIKIPDHVDYEEAAMI-E 143 (343)
T ss_pred CCCCChhHHCcChhhCCCcce---EecccC-------------------CcccceEEechHHeEECcCCCCHHHHHhc-c
Confidence 999999999999999976432 332233 49999999999999999999999999887 4
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
.+++||+++. ...++++++|||+|+|.+|++++|+|+++|+++|+++++++++.+.++++|++.+++++. .. .++
T Consensus 144 ~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~ 218 (343)
T cd08236 144 PAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE---ED-VEK 218 (343)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHH
Confidence 7889999874 778999999999988999999999999999944999999999999999999999998876 55 677
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHHH-hcCceEEEeeccCCC--chhhH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIEI-LKGRSVCGTYFGGLK--PRSDI 321 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~~-~~~~~~~g~~~~~~~--~~~~~ 321 (371)
+.+.+++ ++|++|||++....+..++++++++ |+++.+|........ ..+...+ .++.++.++...... ..+.+
T Consensus 219 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (343)
T cd08236 219 VRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEW 297 (343)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhH
Confidence 7777776 8999999998776689999999998 999999864322111 1222223 337888887643221 24568
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhc-Ccee-eEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLE-GKSL-RCII 365 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~-kvvv 365 (371)
++++++++++.+.+.+++.+.+++++++++++.+.+ +... |+++
T Consensus 298 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 298 RTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 889999999987644446689999999999999988 5444 7663
No 74
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2.7e-38 Score=297.66 Aligned_cols=300 Identities=19% Similarity=0.211 Sum_probs=232.6
Q ss_pred CcEEEEEecCCCC-CCeEEEEEeEeecccccccccc---cCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 8 PLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWK---SSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 8 ~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~---g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
.+++++.|.|+|. ++||||||.|++||+.|..... +..... .+|.++|||++|+|+++|+++++|++||+|+.+
T Consensus 22 ~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~--~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 22 NFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLA--PWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCC--CccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 4788899999874 9999999999999998853322 211112 467889999999999999999999999999542
Q ss_pred cCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcch---
Q 017457 84 FHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGI--- 160 (371)
Q Consensus 84 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~--- 160 (371)
. ++|+||+++++++++++|+++++.+
T Consensus 100 ~---------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~ 128 (345)
T cd08293 100 N---------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSY 128 (345)
T ss_pred C---------------------------------------------------CCceeEEEecHHHeEEcCccccccchhH
Confidence 1 2799999999999999999864432
Q ss_pred -hhccccchhhhHHHHHHHcCCCCC--CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcC
Q 017457 161 -ACLLSCGVSTGVGAAWKVAGVEVG--STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINP 235 (371)
Q Consensus 161 -aa~~~~~~~ta~~~l~~~~~~~~g--~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~ 235 (371)
+++++.++.|||+++....++++| ++|||+|+ |++|++++|+|+++|+++|+++++++++.+.+++ +|+++++++
T Consensus 129 ~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~ 208 (345)
T cd08293 129 FLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY 208 (345)
T ss_pred HhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEEC
Confidence 455677899999988777788877 99999998 9999999999999998679999999999999876 999999998
Q ss_pred CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC-Cce----ecC--HHHHhc--Cce
Q 017457 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG-SPI----SLN--SIEILK--GRS 306 (371)
Q Consensus 236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~-~~~----~~~--~~~~~~--~~~ 306 (371)
.+ .++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|..... ... .+. ...+.. +.+
T Consensus 209 ~~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (345)
T cd08293 209 KT---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNIT 283 (345)
T ss_pred CC---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceE
Confidence 77 78888888887679999999999877 79999999998 999999852211 001 111 111222 333
Q ss_pred EEEeeccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 307 VCGTYFGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 307 ~~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
+.+....... ..+.+++++++++++++.+. ....++++++++|++.+.+++.. |+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 284 RERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 3333222211 12346778899999987654 33557999999999999887765 998864
No 75
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2.5e-38 Score=295.49 Aligned_cols=293 Identities=22% Similarity=0.276 Sum_probs=235.2
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
...+++.+.|.|+|++|||||||.|+++|+.|. .|.+... ..|.++|.|++|+|+++|+ .|++||+|+..
T Consensus 16 ~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~---~g~~~~~--~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 16 DSDFELKTVELPPLNNGEVLLEALFLSVDPYMR---VAAKRLK--EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CCceEEEeccCCCCCCCcEEEEEEEEecCHHHh---cccCcCC--CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 345888999999999999999999999999644 3443332 4577999999999999874 59999999542
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC----CCCCCcchh
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI----TPHIPLGIA 161 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~----P~~l~~~~a 161 (371)
++|++|+.++.+++.++ |++++++++
T Consensus 86 --------------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~a 115 (325)
T TIGR02825 86 --------------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLA 115 (325)
T ss_pred --------------------------------------------------cCceeeEEechhheEEccccccCCCCHHHH
Confidence 26889999999988887 899999987
Q ss_pred -hccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCC
Q 017457 162 -CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 162 -a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
+++++++.|||+++.+..++++|++|||+|+ |++|++++|+||++|+ +|+++++++++.++++++|+++++++++
T Consensus 116 aa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-- 192 (325)
T TIGR02825 116 LGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-- 192 (325)
T ss_pred HHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--
Confidence 6788899999998888899999999999996 9999999999999999 8999999999999999999999998765
Q ss_pred CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC---cee--cCHHH-HhcCceEEEeecc
Q 017457 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---PIS--LNSIE-ILKGRSVCGTYFG 313 (371)
Q Consensus 240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~~~--~~~~~-~~~~~~~~g~~~~ 313 (371)
...+.+.++..+++++|++||++|+.. +..++++++++ |+++.+|...... ... ..... ++.++++.++...
T Consensus 193 ~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 270 (325)
T TIGR02825 193 VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVN 270 (325)
T ss_pred cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEeh
Confidence 124555566665558999999999876 79999999998 9999998632110 111 11222 3347778777543
Q ss_pred CCC---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 314 GLK---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 314 ~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
.+. ..+.++++++++++|++.+. +...|+++++++|++.+.+++.. |+++
T Consensus 271 ~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv 324 (325)
T TIGR02825 271 RWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIV 324 (325)
T ss_pred hhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEe
Confidence 322 13467889999999988765 44678999999999999887765 8876
No 76
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.2e-37 Score=291.82 Aligned_cols=321 Identities=26% Similarity=0.476 Sum_probs=267.9
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
.++++.+.+.|++.++||+||+.++++|+.|+....|.++. .+|.++|+|++|+|+++|++++++++||+|++.+..
T Consensus 10 ~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~---~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 86 (334)
T cd08234 10 GELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA---APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNI 86 (334)
T ss_pred CceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC---CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCc
Confidence 36888999999999999999999999999999988887642 367899999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|.+|..+.+++|+..+. .|....| +|++|+.++.++++++|+++++.+++.+ +
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~ 143 (334)
T cd08234 87 YCGECFYCRRGRPNLCENLTA---VGVTRNG-------------------GFAEYVVVPAKQVYKIPDNLSFEEAALA-E 143 (334)
T ss_pred CCCCCccccCcChhhCCCcce---eccCCCC-------------------cceeEEEecHHHcEECcCCCCHHHHhhh-h
Confidence 999999999999999987752 3333344 8999999999999999999999998876 6
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
.+.++++++ ...+++++++|||+|+|.+|.+++++|+++|+++|+++++++++.+.++++|++.++++++ .++...
T Consensus 144 ~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 219 (334)
T cd08234 144 PLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ 219 (334)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH
Confidence 788899876 7789999999999988999999999999999944899999999999999999988888766 455444
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCchhhHHHH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~ 324 (371)
+.+.+ ++|++||+++.......++++++++ |+++.+|.........++...++ .+.++.+.... ...++++
T Consensus 220 --~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 292 (334)
T cd08234 220 --KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PYTFPRA 292 (334)
T ss_pred --HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HHHHHHH
Confidence 34444 8999999998766688999999998 99999986433233445555444 37777776422 3468889
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
+++++++++.+.+++++.+++++++++++.+.+ ... |+++
T Consensus 293 ~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 293 IALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 999999988765556789999999999999988 444 7775
No 77
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.2e-37 Score=292.18 Aligned_cols=325 Identities=22% Similarity=0.352 Sum_probs=272.2
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+.+.+.+.|++.+++|+|++.++++|++|++++.|..... ..+|.++|||++|+|+.+|++++.|++||+|++.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (342)
T cd08266 13 EVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK-LPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGI 91 (342)
T ss_pred cceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCC-CCCCeecccceEEEEEEeCCCCCCCCCCCEEEEcccc
Confidence 347777888888999999999999999999999888865422 1567899999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|++|.++.++.|+.... .|....| +|++|+.++.+.++++|+++++.+++.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~---~g~~~~g-------------------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~ 149 (342)
T cd08266 92 SCGRCEYCLAGRENLCAQYGI---LGEHVDG-------------------GYAEYVAVPARNLLPIPDNLSFEEAAAAPL 149 (342)
T ss_pred ccccchhhccccccccccccc---cccccCc-------------------ceeEEEEechHHceeCCCCCCHHHHHhhhh
Confidence 999999999999999986543 4443343 899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
++.+|++++.....+.++++++|+|+ +++|+++++++++.|+ +|+++++++++.+.+..++.+.+++... .++.+
T Consensus 150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 225 (342)
T cd08266 150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRK---EDFVR 225 (342)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHH
Confidence 99999998878888999999999998 7999999999999999 8999999999999888888887787655 56777
Q ss_pred HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhHHH
Q 017457 246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIAT 323 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~ 323 (371)
.+.+.+.+ ++|+++++.|... +...+++++++ |+++.++..... ...++... +..+.++.+..... ...+.+
T Consensus 226 ~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 299 (342)
T cd08266 226 EVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT---KAELDE 299 (342)
T ss_pred HHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC---HHHHHH
Confidence 77777766 8999999999876 88999999998 999999864332 22344423 34478888775433 457888
Q ss_pred HHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 324 LAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 324 ~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
++++++++.+.+ .+++.|+++++++|++.+.++... |++++
T Consensus 300 ~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 341 (342)
T cd08266 300 ALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLT 341 (342)
T ss_pred HHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEe
Confidence 999999997653 367899999999999999876655 88875
No 78
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=5e-38 Score=293.09 Aligned_cols=298 Identities=22% Similarity=0.258 Sum_probs=250.9
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.++++++|.|++.++||+|||.++++|++|++.+.|.++... .+|.++|||++|+|+++|++++++++||+|++...
T Consensus 15 ~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~-~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~-- 91 (324)
T cd08292 15 VLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKP-ELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPV-- 91 (324)
T ss_pred eEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCC-CCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccC--
Confidence 378889999999999999999999999999999988765321 56889999999999999999999999999966421
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
. |+|++|+.+++..++++|+++++++++.+++.
T Consensus 92 ----------------------------~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 124 (324)
T cd08292 92 ----------------------------H-------------------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAM 124 (324)
T ss_pred ----------------------------C-------------------CcceeEEEEchHHeEECCCCCCHHHhhhcccc
Confidence 1 48999999999999999999999999999989
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+||+++ ...++++|++|||+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|+++++++++ .++.+.
T Consensus 125 ~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 199 (324)
T cd08292 125 PLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDK 199 (324)
T ss_pred HHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHH
Confidence 99999865 5588999999999987 9999999999999999 8999988999989888899999998877 678888
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC-------c
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK-------P 317 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~-------~ 317 (371)
+.+++++ ++|++||++|+.. ...++++++++ |+++.+|.. ......++...++ ++.++.++....+. .
T Consensus 200 i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (324)
T cd08292 200 VREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGSM-SGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYR 276 (324)
T ss_pred HHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEecC-CCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHH
Confidence 9999887 9999999999876 88999999998 999999864 2223344443333 48888887654321 1
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
...++.+++++.++.+.+. +.+.|+++++++|++.+.++... |+++
T Consensus 277 ~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv 323 (324)
T cd08292 277 KRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLL 323 (324)
T ss_pred HHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEe
Confidence 2467889999999987654 35889999999999998876554 7775
No 79
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=7.1e-38 Score=292.36 Aligned_cols=308 Identities=25% Similarity=0.368 Sum_probs=253.1
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
+.+++++.+.|+++++||+||+.++++|++|++...+. ... .+|.++|||++|+|+++|++++.|++||+|++.+..
T Consensus 12 ~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 88 (325)
T cd08264 12 ENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVK--PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRV 88 (325)
T ss_pred CceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCC--CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCc
Confidence 45888888888899999999999999999999887642 222 357789999999999999999999999999999999
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|++|++|..+.+++|..... .|+...| +|++|+.++++.++++|+++++++++.+++
T Consensus 89 ~~~~c~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~ 146 (325)
T cd08264 89 FDGTCDMCLSGNEMLCRNGGI---IGVVSNG-------------------GYAEYIVVPEKNLFKIPDSISDELAASLPV 146 (325)
T ss_pred CCCCChhhcCCCccccCccce---eeccCCC-------------------ceeeEEEcCHHHceeCCCCCCHHHhhhhhh
Confidence 999999999999999986542 3433333 899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
++.+||+++. ..++++|++|+|+|+ |++|++++++|+++|+ +|+++. +.+.++++|++++++.++ ..+
T Consensus 147 ~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~~-----~~~ 215 (325)
T cd08264 147 AALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYDE-----VEE 215 (325)
T ss_pred hhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecchH-----HHH
Confidence 9999999865 488999999999998 9999999999999999 788876 246777899988887643 345
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHH
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~ 324 (371)
.+.+++ +++|+++|++|+.. +...+++++++ |+++.+|.. ......++...+.. +.++.++..+. ++.++++
T Consensus 216 ~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 288 (325)
T cd08264 216 KVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTL-TGGEVKLDLSDLYSKQISIIGSTGGT---RKELLEL 288 (325)
T ss_pred HHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecC-CCCCCccCHHHHhhcCcEEEEccCCC---HHHHHHH
Confidence 566666 68999999999864 89999999998 999999863 22234555555554 67777764332 4678889
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL 361 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 361 (371)
++++...+ . .+++.|+++++++|++.+.+++..
T Consensus 289 ~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 289 VKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred HHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence 99886443 2 356899999999999998876543
No 80
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=2.6e-37 Score=289.11 Aligned_cols=320 Identities=33% Similarity=0.507 Sum_probs=264.9
Q ss_pred CCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 5 PGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 5 ~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
++..+.+++.|.|++.+++|+|+++++++|++|++...|.++.. ..|.++|+|++|+|+++|++++.+++||+|++..
T Consensus 9 ~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~ 86 (332)
T cd08259 9 PNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG--KYPLILGHEIVGTVEEVGEGVERFKPGDRVILYY 86 (332)
T ss_pred CCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC--CCCeeccccceEEEEEECCCCccCCCCCEEEECC
Confidence 35678899999999999999999999999999999998876544 5678999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
...|+.|++|..+.+++|... . ..|.... |+|++|+.++.+.++++|+++++++++.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~ 144 (332)
T cd08259 87 YIPCGKCEYCLSGEENLCRNR-A--EYGEEVD-------------------GGFAEYVKVPERSLVKLPDNVSDESAALA 144 (332)
T ss_pred CCCCcCChhhhCCCcccCCCc-c--ccccccC-------------------CeeeeEEEechhheEECCCCCCHHHHhhh
Confidence 899999999999999999764 2 2333333 48999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
++++.+||+++.. ..+++++++||+|+ |++|++++++++..|+ +|+++.+++++.+.++++|.+.+++.+ ++
T Consensus 145 ~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 217 (332)
T cd08259 145 ACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-----KF 217 (332)
T ss_pred ccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-----HH
Confidence 9999999998765 88999999999997 9999999999999999 899999899999999888988777542 25
Q ss_pred HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCchhhHH
Q 017457 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
.+.+.+.. ++|++++++|... ...++++++++ |+++.++...... ..++... .+++.++.++.. ....+++
T Consensus 218 ~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 289 (332)
T cd08259 218 SEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLIGNVTPDP-APLRPGLLILKEIRIIGSIS---ATKADVE 289 (332)
T ss_pred HHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEEcCCCCCC-cCCCHHHHHhCCcEEEEecC---CCHHHHH
Confidence 55555443 7999999999877 88999999998 9999998643221 1222222 234666666531 2356788
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
+++++++++.+.+ .+++.|+++++++|++.+.+++.. |+++
T Consensus 290 ~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 331 (332)
T cd08259 290 EALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVL 331 (332)
T ss_pred HHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEe
Confidence 9999999997653 366899999999999999887765 7776
No 81
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.8e-37 Score=290.08 Aligned_cols=311 Identities=24% Similarity=0.357 Sum_probs=259.8
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc-CC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF-HR 86 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~-~~ 86 (371)
++.+.+.+.|.+.++||+||+.++++|++|++...|.++.. .+|.++|||++|+|+++|++++++++||+|++.+ ..
T Consensus 16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ 93 (329)
T cd08298 16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPP--KLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGS 93 (329)
T ss_pred CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCC--CCCccccccccEEEEEECCCCCCCcCCCEEEEeccCC
Confidence 58888888888999999999999999999999988876544 6788999999999999999999999999997654 46
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|.+|..+.+++|..... .|+..+| +|++|+.++.+.++++|+++++.+++.+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~ 151 (329)
T cd08298 94 TCGECRYCRSGRENLCDNARF---TGYTVDG-------------------GYAEYMVADERFAYPIPEDYDDEEAAPLLC 151 (329)
T ss_pred CCCCChhHhCcChhhCCCccc---cccccCC-------------------ceEEEEEecchhEEECCCCCCHHHhhHhhh
Confidence 799999999999999987764 4444444 899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
++.|||+++ +.++++++++|||+|+|++|++++++|++.|+ +|+++++++++++.++++|++++++.+. .
T Consensus 152 ~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~----- 221 (329)
T cd08298 152 AGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L----- 221 (329)
T ss_pred hhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c-----
Confidence 999999987 88999999999999999999999999999999 8999999999999999999988887654 1
Q ss_pred HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHHH
Q 017457 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQ 326 (371)
Q Consensus 247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 326 (371)
.++++|+++++.+....++.++++++++ |+++.+|... .....++...+..+..+.+.... ..+.++++++
T Consensus 222 ----~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~ 292 (329)
T cd08298 222 ----PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHM-SDIPAFDYELLWGEKTIRSVANL---TRQDGEEFLK 292 (329)
T ss_pred ----CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCC-CCCCccchhhhhCceEEEEecCC---CHHHHHHHHH
Confidence 1237999999877666689999999998 9999988532 12223333334446666665322 2456888999
Q ss_pred HHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 327 KYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 327 ~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
+++++.+.+ . .+.|+++++++|++.+.+++.. |++
T Consensus 293 l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v 328 (329)
T cd08298 293 LAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAV 328 (329)
T ss_pred HHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceee
Confidence 999997764 2 4889999999999999887665 665
No 82
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=7.4e-37 Score=286.09 Aligned_cols=321 Identities=27% Similarity=0.445 Sum_probs=262.8
Q ss_pred cCCCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeec
Q 017457 4 IPGKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPI 83 (371)
Q Consensus 4 ~~~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~ 83 (371)
+++.++++++.|.|++.+++|+|++.++++|++|++...|.+... .+|.++|||++|+|+++|++++++++||+|++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~--~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~ 84 (330)
T cd08245 7 AAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGS--KYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVG 84 (330)
T ss_pred cCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCC--CCCcccCccceEEEEEECCCCcccccCCEEEEc
Confidence 344579999999999999999999999999999999988876433 568899999999999999999999999999875
Q ss_pred cC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 84 FH-RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 84 ~~-~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
+. ..|+.|.+|..+..++|..... .++...| +|++|+.++.++++++|+++++.+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------------------~~~~~~~v~~~~~~~~p~~~~~~~~~ 142 (330)
T cd08245 85 WLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG-------------------GYAEYMVADAEYTVLLPDGLPLAQAA 142 (330)
T ss_pred cccCCCCCChhhhCcCcccCcCccc---cCcccCC-------------------ccccEEEEcHHHeEECCCCCCHHHhh
Confidence 54 6799999999999999987542 3332333 89999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc
Q 017457 163 LLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT 242 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~ 242 (371)
.+++.+.+||+++.. ..+.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++... ..
T Consensus 143 ~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~ 217 (330)
T cd08245 143 PLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA---EL 217 (330)
T ss_pred hhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cc
Confidence 999999999997644 789999999999888899999999999999 8999999999999999999988887654 33
Q ss_pred HHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 321 (371)
.... ..+++|+++|+++.......++++++++ |+++.++.... ....+....+.. +.++.++.... ...+
T Consensus 218 ~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 288 (330)
T cd08245 218 DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPES-PPFSPDIFPLIMKRQSIAGSTHGG---RADL 288 (330)
T ss_pred hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCC-CccccchHHHHhCCCEEEEeccCC---HHHH
Confidence 3222 2247999999988766689999999998 99999986422 222222333444 67777775432 4578
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
+.+++++.++.+.+ .+ +.+++++++++|+.+.+++.. |+++
T Consensus 289 ~~~~~ll~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 289 QEALDFAAEGKVKP--MI-ETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHcCCCcc--eE-EEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 88999999997764 33 789999999999999887665 6653
No 83
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.8e-37 Score=287.87 Aligned_cols=313 Identities=22% Similarity=0.286 Sum_probs=250.5
Q ss_pred CcEEEE-EecCCCCCCeEEEEEeEeecccccccccccCCCC------------------CCCCCCccccccccEEEEEeC
Q 017457 8 PLVIEE-IEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL------------------PKLPLPVIFGHEAVGVVESVG 68 (371)
Q Consensus 8 ~l~~~~-~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~------------------~~~~~p~~~G~e~~G~Vv~vG 68 (371)
.+.+.+ .+.|+|.+++|+|||.++++|++|+++..|.++. ....+|.++|||++|+|+++|
T Consensus 14 ~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG 93 (350)
T cd08274 14 KLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVG 93 (350)
T ss_pred ceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeC
Confidence 355544 4777889999999999999999999988776431 012578899999999999999
Q ss_pred CCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce
Q 017457 69 EYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH 148 (371)
Q Consensus 69 ~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 148 (371)
+++++|++||+|++.+...|+.|+.|.. |.. .|...+ |+|++|+.++...
T Consensus 94 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~~------~~~~~~-------------------g~~~~~~~v~~~~ 143 (350)
T cd08274 94 EGVDTARIGERVLVDPSIRDPPEDDPAD-----IDY------IGSERD-------------------GGFAEYTVVPAEN 143 (350)
T ss_pred CCCCCCCCCCEEEEecCcCCCCcccccc-----ccc------cCCCCC-------------------ccceEEEEecHHH
Confidence 9999999999999988888888776531 110 121122 3899999999999
Q ss_pred eEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh
Q 017457 149 VVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF 227 (371)
Q Consensus 149 ~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l 227 (371)
++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|++++++. +++.++++
T Consensus 144 ~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~~~~-~~~~~~~~ 220 (350)
T cd08274 144 AYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAA-KEEAVRAL 220 (350)
T ss_pred ceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCch-hhHHHHhc
Confidence 999999999999999999999999976 7788999999999998 9999999999999999 788888665 88888999
Q ss_pred CcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-Cc
Q 017457 228 GITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GR 305 (371)
Q Consensus 228 ga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~ 305 (371)
|++.+++..+ ..+.+ ...+.+ ++|++||++++.. ++.++++++++ |+++.+|.. ......++...++. +.
T Consensus 221 g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~-~~~~~~~~~~~~~~~~~ 292 (350)
T cd08274 221 GADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGAI-AGPVVELDLRTLYLKDL 292 (350)
T ss_pred CCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEeccc-CCccccCCHHHhhhcce
Confidence 9986666544 33333 455555 8999999999865 89999999998 999999864 22224555555444 88
Q ss_pred eEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 306 SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 306 ~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
++.++.... ...+.++++++.++++.. ++++.|+++++++|++.+.++... |+++.
T Consensus 293 ~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~ 349 (350)
T cd08274 293 TLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLV 349 (350)
T ss_pred EEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence 888876432 467889999999997653 356889999999999999876655 88875
No 84
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=7.4e-37 Score=285.87 Aligned_cols=293 Identities=20% Similarity=0.225 Sum_probs=235.3
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+++++.|.|+|+++||+|||++++||+.|...... .. .+|.++|+|++|+|++ .++.|++||+|...
T Consensus 19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~--~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~--- 87 (329)
T cd08294 19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LN--EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS--- 87 (329)
T ss_pred cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CC--CCCcEecceEEEEEec---CCCCCCCCCEEEee---
Confidence 4589999999999999999999999999876542211 11 4678999999999985 44679999999542
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc---eeEECCCCCC--c---
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT---HVVKITPHIP--L--- 158 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~---~~~~~P~~l~--~--- 158 (371)
++|++|+.++.+ .++++|++++ +
T Consensus 88 -------------------------------------------------~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~ 118 (329)
T cd08294 88 -------------------------------------------------FGWRTHTVSDGKDQPDLYKLPADLPDDLPPS 118 (329)
T ss_pred -------------------------------------------------CCeeeEEEECCccccceEECCccccccCChH
Confidence 268899999999 9999999998 2
Q ss_pred chhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCC
Q 017457 159 GIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPAT 237 (371)
Q Consensus 159 ~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~ 237 (371)
..+++++++++|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.++++|+++++++++
T Consensus 119 ~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~ 197 (329)
T cd08294 119 LALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT 197 (329)
T ss_pred HHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence 2334678899999998878889999999999996 9999999999999999 8999999999999999999999999887
Q ss_pred CCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC---c--eecCHHH-HhcCceEEEee
Q 017457 238 CGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS---P--ISLNSIE-ILKGRSVCGTY 311 (371)
Q Consensus 238 ~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~---~--~~~~~~~-~~~~~~~~g~~ 311 (371)
.++.+.+++++++++|++||++|+.. +..++++++++ |+++.+|...... . ....... ++.++++.++.
T Consensus 198 ---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 272 (329)
T cd08294 198 ---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFI 272 (329)
T ss_pred ---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEE
Confidence 78888888887678999999999865 89999999998 9999998532111 1 0112222 33478888875
Q ss_pred ccCCC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 312 FGGLK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 312 ~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
...+. ..+.+++++++++++++.+. ....|+++++++|++.+.+++.. |+++++
T Consensus 273 ~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 273 VYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 44321 12346788999999987765 23568999999999999887765 888863
No 85
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=3.2e-36 Score=278.80 Aligned_cols=290 Identities=27% Similarity=0.451 Sum_probs=244.5
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC-
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH- 85 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~- 85 (371)
.++++++++.|++.+++|+|||.++++|++|.+...|.+... ..|.++|+|++|+|+++|++++.|++||+|++.+.
T Consensus 12 ~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~--~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 89 (306)
T cd08258 12 GNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPV--ETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTF 89 (306)
T ss_pred CceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcC--CCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCc
Confidence 358999999999999999999999999999998888875333 45789999999999999999999999999998875
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
..|+.|++|..+..+.|...+. .|.... |+|++|+.++.++++++|+++++++++ +.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~ 146 (306)
T cd08258 90 STCGRCPYCRRGDYNLCPHRKG---IGTQAD-------------------GGFAEYVLVPEESLHELPENLSLEAAA-LT 146 (306)
T ss_pred CCCCCCcchhCcCcccCCCCce---eeecCC-------------------CceEEEEEcchHHeEECcCCCCHHHHH-hh
Confidence 6799999999999999976431 333233 499999999999999999999999887 66
Q ss_pred cchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 166 CGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
..+++||+++....+++++++|||.|+|.+|++++++|+++|+ +|+++. +++++.+.++++|++++ +++. .++
T Consensus 147 ~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~ 221 (306)
T cd08258 147 EPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDL 221 (306)
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCH
Confidence 6888999988888889999999998779999999999999999 787763 34567788889999888 7766 788
Q ss_pred HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhH
Q 017457 244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDI 321 (371)
Q Consensus 244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 321 (371)
.+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|... .....++...++. ++++.|+.++. ++++
T Consensus 222 ~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~ 296 (306)
T cd08258 222 AELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSST---PASW 296 (306)
T ss_pred HHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecCc---hHhH
Confidence 8888888776 8999999998766688999999998 9999999854 2335556566554 89999987654 5689
Q ss_pred HHHHHHHHcC
Q 017457 322 ATLAQKYLDK 331 (371)
Q Consensus 322 ~~~~~~~~~g 331 (371)
+++++++++|
T Consensus 297 ~~~~~~~~~~ 306 (306)
T cd08258 297 ETALRLLASG 306 (306)
T ss_pred HHHHHHHhcC
Confidence 9999998875
No 86
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=4.7e-36 Score=281.33 Aligned_cols=300 Identities=17% Similarity=0.195 Sum_probs=239.6
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
...+++.++|.|+|+++||+|||+++++|+.|..++.|..+.. .+|.++|+|++|+|+++|++++.|++||+|+....
T Consensus 14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~ 91 (336)
T TIGR02817 14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA--GQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD 91 (336)
T ss_pred cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC--CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC
Confidence 3458888999999999999999999999999998888765433 56889999999999999999999999999965310
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
.... |+|++|+.++++.++++|+++++++++.++
T Consensus 92 ---------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~ 125 (336)
T TIGR02817 92 ---------------------------IDRP-------------------GSNAEFHLVDERIVGHKPKSLSFAEAAALP 125 (336)
T ss_pred ---------------------------CCCC-------------------CcccceEEEcHHHcccCCCCCCHHHHhhhh
Confidence 0112 489999999999999999999999999999
Q ss_pred cchhhhHHHHHHHcCCCC-----CCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCC
Q 017457 166 CGVSTGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATC 238 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~-----g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~ 238 (371)
+++.|||+++....++++ |++|||+|+ |++|++++|+|+++ |+ +|+++++++++.+.++++|+++++++..
T Consensus 126 ~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~- 203 (336)
T TIGR02817 126 LTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK- 203 (336)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC-
Confidence 999999998877788877 999999997 99999999999998 99 8999999999999999999999998544
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccC--C
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGG--L 315 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~--~ 315 (371)
++.+.+.+..++++|+++|++++.......+++++++ |+++.++.. ..++...+.. +.++.+..+.. .
T Consensus 204 ---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (336)
T TIGR02817 204 ---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP-----AELDISPFKRKSISLHWEFMFTRSM 274 (336)
T ss_pred ---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc-----ccccchhhhhcceEEEEEEeecccc
Confidence 5777777754448999999987666689999999998 999988531 1233333333 35555433221 1
Q ss_pred Cc-------hhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEE
Q 017457 316 KP-------RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 316 ~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.. ...++++++++.++.+... +.+.+ +++++++|++.+.+++.. |+++.
T Consensus 275 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 275 FQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred cchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 00 1346789999999976533 33444 478999999999887665 77764
No 87
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=1.7e-35 Score=274.52 Aligned_cols=302 Identities=21% Similarity=0.330 Sum_probs=244.3
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeeccccccccc-ccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFW-KSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~-~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
.+.+++++++.|++.++||+||+.++++|+.|+..+ .|......+.+|.++|+|++|+|+++|+.++++++||+|+...
T Consensus 4 ~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 83 (312)
T cd08269 4 PGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS 83 (312)
T ss_pred CCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec
Confidence 346999999999999999999999999999999887 6654322114578999999999999999999999999997642
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
. |+|++|+.+++++++++|+++ ..++.+
T Consensus 84 ~--------------------------------------------------g~~~~~~~v~~~~~~~lP~~~--~~~~~~ 111 (312)
T cd08269 84 G--------------------------------------------------GAFAEYDLADADHAVPLPSLL--DGQAFP 111 (312)
T ss_pred C--------------------------------------------------CcceeeEEEchhheEECCCch--hhhHHh
Confidence 1 389999999999999999998 233322
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
..++++|++++. ..+++++++|||+|+|.+|.+++++|+++|+++|+++.+++++.+.++++|++++++.+. .++.
T Consensus 112 ~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~ 187 (312)
T cd08269 112 GEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS---EAIV 187 (312)
T ss_pred hhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC---cCHH
Confidence 367888988764 788999999999988999999999999999933999999999999999999998988766 6788
Q ss_pred HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC-chhhH
Q 017457 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK-PRSDI 321 (371)
Q Consensus 245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~~~~~ 321 (371)
+.+.+++++ ++|+++|++|+.......+++++++ |+++.+|... .....++...+ +.+.++.++...... ..+.+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 888888877 9999999998776689999999998 9999998643 22334443333 336777766433321 23578
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCce--eeEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKS--LRCII 365 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~kvvv 365 (371)
++++++++++.+.+..++.+.|+++++++|++.+.++.. .|+++
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 899999999987765445688999999999999988754 48776
No 88
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=1e-35 Score=277.36 Aligned_cols=299 Identities=22% Similarity=0.275 Sum_probs=252.5
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+++++.|.|++.+++|+||+.++++|+.|...+.|...... .+|.++|+|++|+|+++|++++++++||+|++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-- 89 (323)
T cd05282 13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRP-PLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG-- 89 (323)
T ss_pred eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCC-CCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC--
Confidence 466778888889999999999999999999998877654322 56789999999999999999999999999976431
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
. |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 90 ----------------------------~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~ 122 (323)
T cd05282 90 ----------------------------E-------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYIN 122 (323)
T ss_pred ----------------------------C-------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhcc
Confidence 1 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+||+++.....+.+|++|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++++. .++.+.
T Consensus 123 ~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 198 (323)
T cd05282 123 PLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQR 198 (323)
T ss_pred HHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHH
Confidence 9999998877778899999999988 9999999999999999 8999998999999999999999998876 678888
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCCc-------
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLKP------- 317 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~------- 317 (371)
+.+++++ ++|++|||+++.. ....+++++++ |+++.+|..... ...++...+. ++.++.+..+..+..
T Consensus 199 ~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (323)
T cd05282 199 VKEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAK 275 (323)
T ss_pred HHHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHH
Confidence 8888887 9999999999877 77889999998 999999864332 3455666666 588888876554321
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
.+.+.++++++.++++.+. .++.|+++++++|++.+.++... |+++
T Consensus 276 ~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 322 (323)
T cd05282 276 QETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLL 322 (323)
T ss_pred HHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEee
Confidence 1346778899999977643 56889999999999999887655 7775
No 89
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.3e-35 Score=272.51 Aligned_cols=320 Identities=23% Similarity=0.308 Sum_probs=260.1
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+++++.+.|.++++||+|++.++++|++|++...|.++... ..|.++|||++|+|+++|+.+.++++||+|++....
T Consensus 13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~ 91 (336)
T cd08276 13 DNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPV-KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFP 91 (336)
T ss_pred cceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCC-CCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccc
Confidence 4577888888889999999999999999999998888764332 468889999999999999999999999999987766
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+.|.+| +|..... .|...+ |+|++|+.++.+.++++|+++++.+++.+++
T Consensus 92 ~~~~~~~~------~~~~~~~---~~~~~~-------------------g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~ 143 (336)
T cd08276 92 NWLDGPPT------AEDEASA---LGGPID-------------------GVLAEYVVLPEEGLVRAPDHLSFEEAATLPC 143 (336)
T ss_pred cccccccc------ccccccc---cccccC-------------------ceeeeEEEecHHHeEECCCCCCHHHhhhhhH
Confidence 66554443 3332211 232223 3899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
.+.+||+++.....+++|++|+|+|+|++|++++++|+++|+ +|+++++++++++.+.++|++++++.+. +.++.+.
T Consensus 144 ~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~ 220 (336)
T cd08276 144 AGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT--TPDWGEE 220 (336)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHH
Confidence 999999988777889999999999889999999999999999 8999999999999998899999887653 1467778
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHHHH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~ 324 (371)
+.+++++ ++|+++|+++... ...++++++++ |+++.+|..... ........+ .++.++.+..... ...++++
T Consensus 221 ~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 294 (336)
T cd08276 221 VLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLSGF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAM 294 (336)
T ss_pred HHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCCCC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHH
Confidence 8888887 9999999998665 88999999998 999999864332 222333343 4488888876543 4578889
Q ss_pred HHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 325 AQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 325 ~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
+++++++.+... .++.+++++++++++.+.+++.. |++++
T Consensus 295 ~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 295 NRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred HHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 999988866543 45889999999999999887665 88775
No 90
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=6e-35 Score=272.25 Aligned_cols=302 Identities=17% Similarity=0.204 Sum_probs=248.2
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
.+++.+.+.|.+.++||+|++.++++|++|++...|..+. .....|.++|||++|+|+++|+.++.+++||+|++...
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~- 92 (324)
T cd08244 14 VLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG- 92 (324)
T ss_pred ceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC-
Confidence 4666677777789999999999999999999888876432 11256788999999999999999999999999976421
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
... |+|++|+.++.++++++|+++++.+++.+++
T Consensus 93 ---------------------------~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~ 126 (324)
T cd08244 93 ---------------------------RAG-------------------GGYAELAVADVDSLHPVPDGLDLEAAVAVVH 126 (324)
T ss_pred ---------------------------CCC-------------------ceeeEEEEEchHHeEeCCCCCCHHHHhhhcc
Confidence 011 4899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
.+.||| ++.....++++++|+|+|+ |++|++++++|+++|+ +|+++++++++.+.++++|+++++++.+ .++.+
T Consensus 127 ~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~ 201 (324)
T cd08244 127 DGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPD 201 (324)
T ss_pred hHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHH
Confidence 999995 4677788999999999996 9999999999999999 8999999999999999999988888776 67888
Q ss_pred HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCc---hhh
Q 017457 246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKP---RSD 320 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~---~~~ 320 (371)
.+.+++++ ++|+++|++|+.. ...++++++++ |+++.+|..... ...++...++. +.++.+........ .+.
T Consensus 202 ~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (324)
T cd08244 202 QVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGWASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRAL 278 (324)
T ss_pred HHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEecCCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHH
Confidence 88888777 8999999999887 79999999998 999999874322 22444333334 78888876543321 245
Q ss_pred HHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 321 IATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 321 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
+++++++++++.+.. ++++.|+++++++|++.+.++... |+++.
T Consensus 279 ~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (324)
T cd08244 279 EARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLL 323 (324)
T ss_pred HHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEe
Confidence 777889999987653 366899999999999999887665 88875
No 91
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.4e-35 Score=277.12 Aligned_cols=305 Identities=22% Similarity=0.290 Sum_probs=246.7
Q ss_pred cEEEEEecCCCCC-CeEEEEEeEeecccccccccccCCCCCCC---CCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 9 LVIEEIEVEPPKA-WEIRIKILCTSLCHSDVTFWKSSTDLPKL---PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 9 l~~~~~~~~~~~~-~eVlVkv~~~~i~~~D~~~~~g~~~~~~~---~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
+.+++.|.|+|.+ ++|+||+.++++|+.|.....|..+.... .+|.++|||++|+|+++|+++..|++||+|++..
T Consensus 16 ~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~ 95 (341)
T cd08290 16 LQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLR 95 (341)
T ss_pred eEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecC
Confidence 7888999998887 99999999999999999998887543210 1677899999999999999999999999996642
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcc
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLL 164 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~ 164 (371)
. .. |+|++|+.++.+.++++|+++++++++.+
T Consensus 96 ~-----------------------------~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~ 127 (341)
T cd08290 96 P-----------------------------GL-------------------GTWRTHAVVPADDLIKVPNDVDPEQAATL 127 (341)
T ss_pred C-----------------------------CC-------------------ccchheEeccHHHeEeCCCCCCHHHHHHh
Confidence 1 01 48999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hHHHHHHHhCcceEEcCCCCC
Q 017457 165 SCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP----EKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 165 ~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~----~~~~~~~~lga~~v~~~~~~~ 239 (371)
++.+.|||+++.....+++|++|||+|+ |++|++++++|+++|+ +++++.+++ ++.+.++++|++++++++...
T Consensus 128 ~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 206 (341)
T cd08290 128 SVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLKALGADHVLTEEELR 206 (341)
T ss_pred hccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc
Confidence 9999999998877788999999999987 9999999999999999 788887665 678888889999999876610
Q ss_pred CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCC--
Q 017457 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLK-- 316 (371)
Q Consensus 240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~-- 316 (371)
..++.+.+..++++++|++|||+|+.. ....+++++++ |+++.+|.... ....++... +.++.++.+.......
T Consensus 207 ~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (341)
T cd08290 207 SLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMVTYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKR 283 (341)
T ss_pred cccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEEEEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhh
Confidence 116777787776658999999999876 77899999998 99999985322 223444433 3448888887654321
Q ss_pred --c---hhhHHHHHHHHHcCCCCCCCceeEEE---ecccHHHHHHHHhcCcee-eEEEEe
Q 017457 317 --P---RSDIATLAQKYLDKELNLGEFITHEV---SFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 317 --~---~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
. ...+..+++++.++.+.+. ....+ +++++++|++.+.+++.. |+++.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 284 ANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred cCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 0 1247788899999977654 33556 999999999999887665 888764
No 92
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2.7e-35 Score=275.15 Aligned_cols=303 Identities=18% Similarity=0.191 Sum_probs=245.3
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+++++++.|+|.++||+||+.++++|++|+....|.++.. .+|.++|||++|+|+.+|++++.+++||+|+....
T Consensus 14 ~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~- 90 (327)
T PRK10754 14 EVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP--SLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQS- 90 (327)
T ss_pred hHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC--CCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCC-
Confidence 358888999999999999999999999999999888876544 56788999999999999999999999999964211
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.. |+|++|+.++.+.++++|+++++++++.+++
T Consensus 91 ----------------------------~~-------------------g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~ 123 (327)
T PRK10754 91 ----------------------------AL-------------------GAYSSVHNVPADKAAILPDAISFEQAAASFL 123 (327)
T ss_pred ----------------------------CC-------------------cceeeEEEcCHHHceeCCCCCCHHHHHHHHH
Confidence 01 3899999999999999999999999999888
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
.+.+|++++.....+++|++|+|+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++++++.+. .++.+
T Consensus 124 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~ 199 (327)
T PRK10754 124 KGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVE 199 (327)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHH
Confidence 99999998777788999999999976 9999999999999999 8999999999999999999999998776 77888
Q ss_pred HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc-CceE-EEeec-cCCCch---
Q 017457 246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSV-CGTYF-GGLKPR--- 318 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~-~g~~~-~~~~~~--- 318 (371)
.+++++++ ++|++|||+++.. ....+++++++ |+++.+|.... ....++...+.. +..+ ..... ......
T Consensus 200 ~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (327)
T PRK10754 200 RVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMVSFGNASG-PVTGVNLGILNQKGSLYVTRPSLQGYITTREEL 276 (327)
T ss_pred HHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEEEEccCCC-CCCCcCHHHHhccCceEEecceeecccCCHHHH
Confidence 89998887 8999999999865 88899999998 99999986432 112233332222 1111 11100 111111
Q ss_pred -hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 319 -SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 319 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
+.+..++++++++++.+.....+.|++++++++++.+.+++.. |+++.
T Consensus 277 ~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 277 TEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred HHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 2345688999999887655456899999999999999887655 88875
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=5.9e-35 Score=273.10 Aligned_cols=301 Identities=24% Similarity=0.273 Sum_probs=245.7
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccC
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFH 85 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~ 85 (371)
...+++++.+.|.|.++||+|||.++++|+.|++...|.+.... .+|.++|+|++|+|+.+|+.++++++||+|++...
T Consensus 15 ~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~ 93 (329)
T cd08250 15 REATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGV-KPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSF 93 (329)
T ss_pred ccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCC-CCCcccCceeEEEEEEECCCCCCCCCCCEEEEecC
Confidence 45688999999999999999999999999999998888764321 67889999999999999999999999999966321
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLS 165 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~ 165 (371)
|+|++|+.++.+.++++|++ +.+++.++
T Consensus 94 --------------------------------------------------g~~~s~~~v~~~~~~~ip~~--~~~~a~l~ 121 (329)
T cd08250 94 --------------------------------------------------GAFAEYQVVPARHAVPVPEL--KPEVLPLL 121 (329)
T ss_pred --------------------------------------------------cceeEEEEechHHeEECCCC--cchhhhcc
Confidence 48999999999999999997 35677888
Q ss_pred cchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHH
Q 017457 166 CGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVS 244 (371)
Q Consensus 166 ~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~ 244 (371)
+++.|||+++.....++++++|+|+|+ |.+|++++++|++.|+ +|+++.+++++.+.++++|++.+++.++ .++.
T Consensus 122 ~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~ 197 (329)
T cd08250 122 VSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLG 197 (329)
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHH
Confidence 899999998877788999999999996 9999999999999999 8999999999999999999988888766 5676
Q ss_pred HHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC---------CceecCHHHHhcCceEEEeeccCC
Q 017457 245 QVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG---------SPISLNSIEILKGRSVCGTYFGGL 315 (371)
Q Consensus 245 ~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~~ 315 (371)
+.+....++++|++||++|+.. +..++++++++ |+++.+|..... ....++...+..+.++.++.+..+
T Consensus 198 ~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (329)
T cd08250 198 EVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHY 275 (329)
T ss_pred HHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHH
Confidence 7776665558999999999755 89999999998 999999864321 111233333445888888764432
Q ss_pred C--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 316 K--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 316 ~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
. ..+.+.+++++++++.+.+.....+.++++++++|++.+.+++.. |+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv 328 (329)
T cd08250 276 AKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVV 328 (329)
T ss_pred HHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEe
Confidence 1 134577888999999776543344679999999999999887665 7775
No 94
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.5e-35 Score=274.44 Aligned_cols=302 Identities=23% Similarity=0.334 Sum_probs=227.7
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCC--CCCCccccccccEEEE---EeC-CCCCCcCCCCEEee
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK--LPLPVIFGHEAVGVVE---SVG-EYVEEVKERDLVLP 82 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~--~~~p~~~G~e~~G~Vv---~vG-~~v~~~~~Gd~V~~ 82 (371)
...++.++|.|+++|++|++.++++|+.|+.++.|.+.... ..+|.+++.++.|++. ..| ..+..+..||.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 44567899999999999999999999999999999875541 1466555555555533 333 22233444444422
Q ss_pred ccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhh
Q 017457 83 IFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIAC 162 (371)
Q Consensus 83 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa 162 (371)
+...|+|+||+++|+..++++|++++++++|
T Consensus 100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2233599999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHc------CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457 163 LLSCGVSTGVGAAWKVA------GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~------~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 235 (371)
+++.++.|||.++.... +.++|++|||+|+ |++|++++|+|++.|+ ..+++..++++.++++++|+++++|+
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999998888 8999999999987 9999999999999996 55556668999999999999999999
Q ss_pred CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH----HHhc----CceE
Q 017457 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI----EILK----GRSV 307 (371)
Q Consensus 236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~----~~~~----~~~~ 307 (371)
++ +++.+.+++.++++||+||||+|+.. ......++... |+...++...+ ........ .+.. ...+
T Consensus 210 ~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 283 (347)
T KOG1198|consen 210 KD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLVGD-ELANYKLDDLWQSANGIKLYSLGL 283 (347)
T ss_pred CC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEeccc-cccccccccchhhhhhhhheeeee
Confidence 99 99999999998449999999999986 77888888886 75444443211 11111100 0000 1111
Q ss_pred EEe---eccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457 308 CGT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 368 (371)
Q Consensus 308 ~g~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~ 368 (371)
.+. +.......+.++.+.+++++++ +.+.+++.||++++.+||+.+.+++.. |+++.++
T Consensus 284 ~~~~~~~~~~~~~~~~l~~l~~~ie~gk--ikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 284 KGVNYRWLYFVPSAEYLKALVELIEKGK--IKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred eccceeeeeecCCHHHHHHHHHHHHcCc--ccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 111 1111123567888999999994 455588999999999999999886655 9999875
No 95
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-34 Score=270.48 Aligned_cols=303 Identities=21% Similarity=0.277 Sum_probs=247.8
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+.+.+.|++.++||+|||.++++|+.|.....|.++... ..|.++|+|++|+|+++|++++++++||+|+...
T Consensus 15 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~--- 90 (334)
T PTZ00354 15 VLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPP-GSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALL--- 90 (334)
T ss_pred ceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccceeeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence 466777778889999999999999999999988887654321 4567899999999999999999999999995531
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.+ |+|++|++++.++++++|+++++.+++.++++
T Consensus 91 ---------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~ 124 (334)
T PTZ00354 91 ---------------------------PG-------------------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEA 124 (334)
T ss_pred ---------------------------CC-------------------CceeeEEEecHHHcEeCCCCCCHHHHHHHHHH
Confidence 11 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCcc-HHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKT-VSQ 245 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~-~~~ 245 (371)
+.+||+++.....+++|++|||+|+ |++|++++++|+++|+ +++++.+++++.+.++++|++++++... .+ +.+
T Consensus 125 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 200 (334)
T PTZ00354 125 FLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAP 200 (334)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHH
Confidence 9999998877788999999999997 9999999999999999 7777888999999999999998988765 44 778
Q ss_pred HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee-cCHHHHhc-CceEEEeeccCCCc-----
Q 017457 246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS-LNSIEILK-GRSVCGTYFGGLKP----- 317 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~~~-~~~~~g~~~~~~~~----- 317 (371)
.+.+++++ ++|++||++++.. +..++++++++ |+++.++...+ .... ++...++. +.++.++.......
T Consensus 201 ~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (334)
T PTZ00354 201 KVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFSTLRSRSDEYKAD 277 (334)
T ss_pred HHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeeeccccchhhhHH
Confidence 88888876 9999999998765 89999999998 99999985332 2222 55555554 55888875443221
Q ss_pred --hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 318 --RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 318 --~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
...+++++++++++.+.. ++.+.+++++++++++.+.+++.. |+++.+.+
T Consensus 278 ~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 278 LVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred HHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 022467888888887654 356889999999999998876654 99987654
No 96
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=2.3e-34 Score=268.48 Aligned_cols=302 Identities=19% Similarity=0.216 Sum_probs=235.3
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
++++++.|.|+|+++||+||+.++++|++|+....|.++... .+|.++|||++|+|+++ +++.+++||+|+....
T Consensus 14 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~-- 88 (325)
T cd05280 14 SLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTR-NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY-- 88 (325)
T ss_pred cceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCC-CCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc--
Confidence 689999999999999999999999999999999988764322 46788999999999999 4567999999977431
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
..|+..+ |+|++|+.+++++++++|+++++.+++.+++.
T Consensus 89 ----------------------~~g~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~ 127 (325)
T cd05280 89 ----------------------DLGMNTD-------------------GGFAEYVRVPADWVVPLPEGLSLREAMILGTA 127 (325)
T ss_pred ----------------------ccCCCCC-------------------ceeEEEEEEchhhEEECCCCCCHHHHHhhHHH
Confidence 0222223 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcC--CC-CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 168 VSTGVGAAWKVAG--VE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 168 ~~ta~~~l~~~~~--~~-~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+.+|++++..... +. .+++|||+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++++++.+. .
T Consensus 128 ~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-- 201 (325)
T cd05280 128 GFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEVLDRED---L-- 201 (325)
T ss_pred HHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--
Confidence 9999997755433 35 3579999998 9999999999999999 7999999999999999999999987654 2
Q ss_pred HHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc---h
Q 017457 244 SQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP---R 318 (371)
Q Consensus 244 ~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~ 318 (371)
...+.+...+ ++|++||++++.. +..++++++++ |+++.+|..... ...++...+ .++.++.+........ .
T Consensus 202 ~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (325)
T cd05280 202 LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRK 278 (325)
T ss_pred HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEEeecCchhHHH
Confidence 2233333333 8999999999865 99999999998 999999864322 223444444 3488888875443321 1
Q ss_pred hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
..++.+.+++.++.. ..+.+.|+++++++|++.+.+++.. |+++++
T Consensus 279 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 279 QVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred HHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 223444455555522 2356999999999999999887765 888763
No 97
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=4e-34 Score=266.76 Aligned_cols=301 Identities=18% Similarity=0.224 Sum_probs=237.1
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
+++++++|.|.|.++||+||+.++++|++|+..+.|.++... ..|.++|||++|+|++ +++..|++||+|++...
T Consensus 13 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~-- 87 (323)
T TIGR02823 13 SAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVR-SYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGY-- 87 (323)
T ss_pred ceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCC-CCCccceeeeEEEEEe--cCCCCCCCCCEEEEccC--
Confidence 678999999999999999999999999999998888764321 5688899999999988 55678999999977532
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
..|.... |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 88 ----------------------~~~~~~~-------------------g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~ 126 (323)
T TIGR02823 88 ----------------------GLGVSHD-------------------GGYSQYARVPADWLVPLPEGLSLREAMALGTA 126 (323)
T ss_pred ----------------------CCCCCCC-------------------ccceEEEEEchhheEECCCCCCHHHhhhhhhh
Confidence 0222223 48999999999999999999999999999999
Q ss_pred hhhhHHHHHHH--cCCCCCC-eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 168 VSTGVGAAWKV--AGVEVGS-TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 168 ~~ta~~~l~~~--~~~~~g~-~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+.+|++++... ..+.+++ +|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++.++ .+.
T Consensus 127 ~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~ 202 (323)
T TIGR02823 127 GFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP 202 (323)
T ss_pred HHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH
Confidence 99998875433 3488898 9999998 9999999999999999 8888888888889999999998887654 222
Q ss_pred HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCc---hh
Q 017457 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKP---RS 319 (371)
Q Consensus 244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~---~~ 319 (371)
.++.++++++|+++|++|+.. +..++++++++ |+++.+|... .....++...+ .++.++.+........ ..
T Consensus 203 --~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (323)
T TIGR02823 203 --PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAACGLAG-GPDLPTTVLPFILRGVSLLGIDSVYCPMALREA 277 (323)
T ss_pred --HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEEcccC-CCCccccHHHHhhcceEEEEEeccccCchhHHH
Confidence 445555557999999999876 89999999998 9999999742 22334444444 4488888865432211 12
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.++.+.+++.++.+.. . .+.|+++++++||+.+.+++.. |++++
T Consensus 278 ~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~ 322 (323)
T TIGR02823 278 AWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVD 322 (323)
T ss_pred HHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEe
Confidence 3455666676776543 3 4789999999999999887766 88875
No 98
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=2.4e-34 Score=250.27 Aligned_cols=299 Identities=20% Similarity=0.222 Sum_probs=239.8
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeC--CCCCCcCCCCEEeeccC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVG--EYVEEVKERDLVLPIFH 85 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG--~~v~~~~~Gd~V~~~~~ 85 (371)
+|++++.++|+|+++|||+|..|.|+++. +..+....+.. ..|.-+|-..+|.++... |....|++||.|+..
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY--~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-- 100 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSY--APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-- 100 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCccc--CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec--
Confidence 58999999999999999999999999983 22222222222 455667777766555543 446779999999553
Q ss_pred CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCc--chhhc
Q 017457 86 RDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPL--GIACL 163 (371)
Q Consensus 86 ~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~--~~aa~ 163 (371)
.+|++|..++.+.+.|++++.-+ .....
T Consensus 101 --------------------------------------------------~GWq~y~i~~~~~l~Kvd~~~~pl~~~Lgv 130 (340)
T COG2130 101 --------------------------------------------------SGWQEYAISDGEGLRKLDPSPAPLSAYLGV 130 (340)
T ss_pred --------------------------------------------------ccceEEEeechhhceecCCCCCCcchHHhh
Confidence 27999999999999999865322 22334
Q ss_pred cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCc
Q 017457 164 LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDK 241 (371)
Q Consensus 164 ~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~ 241 (371)
+..+..|||.+|...++.++|++|+|.+| |++|..+.|+||..|+ +|++++.+++|.+++++ +|.|.++|++. +
T Consensus 131 LGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~ 206 (340)
T COG2130 131 LGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---E 206 (340)
T ss_pred cCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---c
Confidence 56699999999999999999999999987 9999999999999999 99999999999999988 99999999999 8
Q ss_pred cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCC--C--ceecC-HHHHhc-CceEEEeec-cC
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHG--S--PISLN-SIEILK-GRSVCGTYF-GG 314 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~--~--~~~~~-~~~~~~-~~~~~g~~~-~~ 314 (371)
++.+.+.+.++.|+|+.||++|+.. +...+..|+.. +|++.||..+.- . ..... ...++. ..++.|+.. .+
T Consensus 207 d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~ 284 (340)
T COG2130 207 DFAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASD 284 (340)
T ss_pred cHHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechh
Confidence 9999999999999999999999998 99999999998 999999963211 1 11111 222333 788999876 33
Q ss_pred CC--chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeCc
Q 017457 315 LK--PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMDK 369 (371)
Q Consensus 315 ~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~~ 369 (371)
+. ..+..+++.+++++|+++... +-+-.||++++||.-+.+++.. |+|+++.+
T Consensus 285 ~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 285 YDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 33 235678899999999998875 3344699999999999999887 99998754
No 99
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=6e-34 Score=265.91 Aligned_cols=304 Identities=16% Similarity=0.205 Sum_probs=230.5
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+++.|.|+|+++||+||+.++++|++|.....+..... ..+|.++|||++|+|+++| +++|++||+|++.+..
T Consensus 14 ~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~~- 89 (326)
T cd08289 14 SVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIV-KRYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSYD- 89 (326)
T ss_pred eeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCcccc-CCCCcCcccceeEEEEEcC--CCCCCCCCEEEEcccc-
Confidence 47888999999999999999999999999987665322111 1457899999999999964 4679999999775320
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.|.... |+|++|+.++++.++++|+++++++++.+++.
T Consensus 90 -----------------------~~~~~~-------------------g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~ 127 (326)
T cd08289 90 -----------------------LGVSHH-------------------GGYSEYARVPAEWVVPLPKGLTLKEAMILGTA 127 (326)
T ss_pred -----------------------cCCCCC-------------------CcceeEEEEcHHHeEECCCCCCHHHHhhhhhH
Confidence 222223 49999999999999999999999999999999
Q ss_pred hhhhHHHHHHHc--C-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 168 VSTGVGAAWKVA--G-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 168 ~~ta~~~l~~~~--~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+.||++++.... . ..++++|||+|+ |++|++++++|+++|+ +|+++++++++++.++++|++++++.++ . .
T Consensus 128 ~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~ 202 (326)
T cd08289 128 GFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---L-Q 202 (326)
T ss_pred HHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-H
Confidence 999998765332 3 345789999998 9999999999999999 8999999999999999999999988765 2 3
Q ss_pred HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCCchhhHH
Q 017457 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 322 (371)
.+.+.+++++++|++||++|+.. +..++++++++ |+++.+|... ....+++...+ .++.++.+....... .....
T Consensus 203 ~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 278 (326)
T cd08289 203 EESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSGLTG-GGEVETTVFPFILRGVNLLGIDSVECP-MELRR 278 (326)
T ss_pred HHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEeecC-CCCCCcchhhhhhccceEEEEEeEecC-chHHH
Confidence 45566665448999999999865 89999999998 9999999742 22233334445 448888887532211 11122
Q ss_pred HHHHHHHcCCCC---CCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 323 TLAQKYLDKELN---LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 323 ~~~~~~~~g~~~---~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
++++.+.+ .+. ....+.+.|+++++++||+.+.+++.. |+++++
T Consensus 279 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 279 RIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred HHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 23333222 111 112346999999999999999887766 888753
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.7e-34 Score=265.49 Aligned_cols=300 Identities=20% Similarity=0.305 Sum_probs=240.6
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+++.+.+.|++.++||+||+.++++|+.|+....|..+.. ..|.++|||++|+|+++|+ .++++||+|++....
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~- 88 (320)
T cd08243 14 VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSV--KFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG- 88 (320)
T ss_pred ceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCccccceeEEEEEEecC--CCCCCCCEEEEecCC-
Confidence 46677777788999999999999999999999888865443 5678899999999999995 579999999775320
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.+...+ |+|++|+.+++..++++|+++++.+++.++++
T Consensus 89 -----------------------~~~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 126 (320)
T cd08243 89 -----------------------MGRTFD-------------------GSYAEYTLVPNEQVYAIDSDLSWAELAALPET 126 (320)
T ss_pred -----------------------CCCCCC-------------------cccceEEEcCHHHcEeCCCCCCHHHHHhcchH
Confidence 111122 48999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.|||+++.....+++|++|||+|+ |++|++++++|+++|+ +|+++.+++++.+.++++|++++++. . .++.+.
T Consensus 127 ~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~ 201 (320)
T cd08243 127 YYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQ 201 (320)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHH
Confidence 9999998877788999999999998 9999999999999999 89999999999999999999888754 3 467777
Q ss_pred HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCce-ecCHHH---HhcCceEEEeeccCCCchhhHH
Q 017457 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPI-SLNSIE---ILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~-~~~~~~---~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
+.++ ++++|+++|++++.. +...+++++++ |+++.+|........ ...... +..+.++.+....... ...++
T Consensus 202 i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 277 (320)
T cd08243 202 LRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP-QTPLQ 277 (320)
T ss_pred HHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh-HHHHH
Confidence 8777 559999999999865 89999999998 999999864222111 111222 2336667666433222 24578
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
.++++++++.+.+. .++.++++++++|++.+.++... |+++
T Consensus 278 ~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 278 ELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 88999999976543 45889999999999999877655 7664
No 101
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=3.9e-34 Score=268.72 Aligned_cols=302 Identities=25% Similarity=0.308 Sum_probs=240.0
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
.++++++.+.|+|+++||+||+.++++|++|+....+.. .. .+|.++|||++|+|+.+|++++.+++||+|+.....
T Consensus 12 ~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~--~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~ 88 (339)
T cd08249 12 GLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IP--SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHG 88 (339)
T ss_pred CcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-cc--CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEecc
Confidence 568888999999999999999999999999998876654 11 356789999999999999999999999999876542
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
.|+ +... .|+|++|+.++.+.++++|+++++.+++.+++
T Consensus 89 ~~~----------------------~~~~-------------------~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~ 127 (339)
T cd08249 89 GNP----------------------NDPR-------------------NGAFQEYVVADADLTAKIPDNISFEEAATLPV 127 (339)
T ss_pred ccC----------------------CCCC-------------------CCcccceEEechhheEECCCCCCHHHceecch
Confidence 221 0011 24899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCC----------CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcC
Q 017457 167 GVSTGVGAAWKVAGV----------EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINP 235 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~----------~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~ 235 (371)
.+.|||+++....++ +++++|||+|+ |.+|++++++|+++|+ +|+++. ++++++.++++|+++++++
T Consensus 128 ~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~ 205 (339)
T cd08249 128 GLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDY 205 (339)
T ss_pred HHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEEC
Confidence 999999987665544 78999999997 9999999999999999 888887 5688999999999999988
Q ss_pred CCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhc--CCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457 236 ATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSRE--GWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 313 (371)
Q Consensus 236 ~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~ 313 (371)
+. .++.+.+++++++++|++||+++++..+..+++++++ + |+++.+|...... .+..+.++......
T Consensus 206 ~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~-------~~~~~~~~~~~~~~ 274 (339)
T cd08249 206 HD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET-------EPRKGVKVKFVLGY 274 (339)
T ss_pred CC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc-------cCCCCceEEEEEee
Confidence 77 6788888888777999999999984558999999999 9 9999998643221 11112222221111
Q ss_pred C---------CCchhhHHHHHHHHHcCCCCCCCceeEEEe--cccHHHHHHHHhcCc-ee-eEEEEe
Q 017457 314 G---------LKPRSDIATLAQKYLDKELNLGEFITHEVS--FHDINKAFDLLLEGK-SL-RCIIWM 367 (371)
Q Consensus 314 ~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~a~~~~~~~~-~~-kvvv~~ 367 (371)
. ......++.++++++++++.+. ....++ ++++++|++.+.+++ .. |+++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 275 TVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred eecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1 0112356778899999987765 225677 999999999998877 55 888764
No 102
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7e-34 Score=262.88 Aligned_cols=287 Identities=20% Similarity=0.267 Sum_probs=235.1
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+++++.+.|.++++||+||+.++++|+.|.+...+. ..|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 13 ~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~------~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--- 83 (305)
T cd08270 13 RLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER------PDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG--- 83 (305)
T ss_pred eeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC------CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence 4777788889999999999999999999999876522 2356899999999999999999999999996532
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.. |+|++|+.++.++++++|+++++.+++.+++.
T Consensus 84 ---------------------------~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~ 117 (305)
T cd08270 84 ---------------------------AM-------------------GAWAELVAVPTGWLAVLPDGVSFAQAATLPVA 117 (305)
T ss_pred ---------------------------CC-------------------cceeeEEEEchHHeEECCCCCCHHHHHHhHhH
Confidence 11 48999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.|||+++...... +|++|+|+|+ |++|++++++|+++|+ +|+.+++++++.+.++++|++.++....
T Consensus 118 ~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------- 186 (305)
T cd08270 118 GVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS--------- 186 (305)
T ss_pred HHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---------
Confidence 99999987555444 5999999998 9999999999999999 8999999999999999999876654322
Q ss_pred HHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc---CceEEEeeccC-CCchhhHH
Q 017457 247 IKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK---GRSVCGTYFGG-LKPRSDIA 322 (371)
Q Consensus 247 i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~---~~~~~g~~~~~-~~~~~~~~ 322 (371)
+++++++|+++|++|+.. +..++++++++ |+++.+|... .....++...+.. +.++.++.+.. ......++
T Consensus 187 --~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (305)
T cd08270 187 --ELSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLA 261 (305)
T ss_pred --cccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEccCHHHHHHHHH
Confidence 122347999999999875 89999999998 9999998643 3334455555554 77888876553 11235678
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
.++++++++++.+. +.+.++++++++|++.+.+++.. |+++.+
T Consensus 262 ~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 262 RLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 89999999988754 56899999999999999887665 888764
No 103
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=2.3e-33 Score=254.47 Aligned_cols=269 Identities=29% Similarity=0.473 Sum_probs=222.0
Q ss_pred eEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCC
Q 017457 23 EIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTC 102 (371)
Q Consensus 23 eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~ 102 (371)
||+|+|.++++|+.|++...|..+.. ..+|.++|+|++|+|+++|+.++.|++||+|+..+...|++|.+|.. .|
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~ 75 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPP-PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LC 75 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcC-CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hC
Confidence 68999999999999999998876511 15678999999999999999999999999999999999999999986 66
Q ss_pred CCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCC
Q 017457 103 SKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVE 182 (371)
Q Consensus 103 ~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~ 182 (371)
..... .+.... |+|++|+.++.+.++++|+++++.+++.+++++.+||+++.....++
T Consensus 76 ~~~~~---~~~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~ 133 (271)
T cd05188 76 PGGGI---LGEGLD-------------------GGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLK 133 (271)
T ss_pred CCCCE---eccccC-------------------CcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCC
Confidence 65543 333333 48999999999999999999999999999999999999877766779
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~ 261 (371)
++++|||+|+|++|++++++++.+|. +|+++++++++.+.++++|++++++... .++.+.+. .+.+ ++|+++++
T Consensus 134 ~~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~ 208 (271)
T cd05188 134 PGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDA 208 (271)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEEC
Confidence 99999999986699999999999998 9999999999999999999988888776 56666666 4554 89999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHHHH
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLAQK 327 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 327 (371)
+++......++++++++ |+++.++..............+.+++++.++.... +.++++++++
T Consensus 209 ~~~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 209 VGGPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred CCCHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 99844489999999998 99999987543322222333344588999886554 3467777665
No 104
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=5.5e-33 Score=260.46 Aligned_cols=299 Identities=20% Similarity=0.225 Sum_probs=239.8
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 88 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 88 (371)
++.++++.|+|.+++|+|++.++++|++|+....+..+.. .+|.++|||++|+|+++|+.++.|++||+|.....
T Consensus 18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~--- 92 (336)
T cd08252 18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVP--GQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD--- 92 (336)
T ss_pred eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCC--CCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC---
Confidence 6666778888899999999999999999998887765433 46778999999999999999999999999966321
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457 89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168 (371)
Q Consensus 89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (371)
+... |+|++|+.++.++++++|+++++++++.+++.+
T Consensus 93 ------------------------~~~~-------------------g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~ 129 (336)
T cd08252 93 ------------------------ITRP-------------------GSNAEYQLVDERIVGHKPKSLSFAEAAALPLTS 129 (336)
T ss_pred ------------------------CCCC-------------------ccceEEEEEchHHeeeCCCCCCHHHhhhhhhHH
Confidence 0012 389999999999999999999999999999999
Q ss_pred hhhHHHHHHHcCCCC-----CCeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCc
Q 017457 169 STGVGAAWKVAGVEV-----GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 169 ~ta~~~l~~~~~~~~-----g~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
.+||+++.+...+.+ |++|+|+|+ |++|++++++|+++| + +|+++++++++.+.++++|++++++.++
T Consensus 130 ~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---- 204 (336)
T cd08252 130 LTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHHQ---- 204 (336)
T ss_pred HHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----
Confidence 999998777788877 999999986 999999999999999 8 9999999999999999999999988654
Q ss_pred cHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC----
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK---- 316 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---- 316 (371)
++.+.+....++++|++||++++...+..++++++++ |+++.+|... ..++...+ .++.++.+..+....
T Consensus 205 ~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T cd08252 205 DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQT 279 (336)
T ss_pred cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC----CcccchhhhcccceEEEEEeeccccccc
Confidence 4556666443348999999999766689999999998 9999998631 23344444 347777765443210
Q ss_pred -----chhhHHHHHHHHHcCCCCCCCc-eeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 317 -----PRSDIATLAQKYLDKELNLGEF-ITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 317 -----~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
....++++++++.++.+.+... ..+.++++++++|++.+.++... |+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 335 (336)
T cd08252 280 PDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVL 335 (336)
T ss_pred cchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEe
Confidence 0234778899999997764311 12457999999999999887765 7775
No 105
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=1.7e-32 Score=254.27 Aligned_cols=298 Identities=23% Similarity=0.279 Sum_probs=244.8
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+.+.+.+++.++||+|+|.++++|+.|++...+..+. .+|.++|||++|+|+.+|++++++++||+|+...
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~--- 86 (320)
T cd05286 13 VLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL---PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG--- 86 (320)
T ss_pred ceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC---CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence 3666677777789999999999999999999888776542 3567899999999999999999999999996632
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.. |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 87 ---------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 120 (320)
T cd05286 87 ---------------------------PP-------------------GAYAEYRVVPASRLVKLPDGISDETAAALLLQ 120 (320)
T ss_pred ---------------------------CC-------------------CceeEEEEecHHHceeCCCCCCHHHHhhccch
Confidence 01 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.++++++....++++|++|||+|+ |++|++++++|+++|+ +|+++++++++.+.++++|++++++.+. .++.+.
T Consensus 121 ~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 196 (320)
T cd05286 121 GLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRD---EDFVER 196 (320)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHH
Confidence 9999998877888999999999996 9999999999999999 8999999999999999999999888766 678888
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC-c----hh
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK-P----RS 319 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~-~----~~ 319 (371)
+..++.+ ++|+++||+++.. ....+++++++ |+++.+|..... ...++...+ .++.++.+.....+. . ..
T Consensus 197 ~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (320)
T cd05286 197 VREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLA 273 (320)
T ss_pred HHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHH
Confidence 8888876 8999999999865 88999999998 999999863322 233444444 347777665432221 1 12
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.+.+++++++++.+... .++.|++++++++++.+.++... |+++.
T Consensus 274 ~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 319 (320)
T cd05286 274 RAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLI 319 (320)
T ss_pred HHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 34668888888876643 55889999999999999887665 87764
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.9e-32 Score=253.43 Aligned_cols=304 Identities=23% Similarity=0.300 Sum_probs=247.1
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+.+.|.|++.+++|+|++.++++|++|+....|...... ..|.++|||++|+|+++|+++++|++||+|++...-
T Consensus 14 ~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~- 91 (325)
T cd08253 14 VLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLP-PLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG- 91 (325)
T ss_pred cceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCC-CCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc-
Confidence 477888999999999999999999999999998887654322 678899999999999999999999999999775420
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
. .... |++++|+.++.+.++++|+++++.+++.++++
T Consensus 92 -----------------------~-~~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~ 128 (325)
T cd08253 92 -----------------------W-GRRQ-------------------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIP 128 (325)
T ss_pred -----------------------c-CCCC-------------------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhH
Confidence 0 0011 48999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+||+++....++.+|++|+|+|+ |++|++++++++++|+ +|+++++++++.+.+.++|++++++... .++.+.
T Consensus 129 ~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 204 (325)
T cd08253 129 ALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRA---EDLADR 204 (325)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHH
Confidence 9999998877789999999999997 9999999999999999 8999999999999998899998888766 677788
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHH-HhcCceEEEeeccCCCc---hhhH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIE-ILKGRSVCGTYFGGLKP---RSDI 321 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~---~~~~ 321 (371)
+.+++.+ ++|+++|++++.. ....+++++++ |+++.++... ....++... +..+.++.+........ .+.+
T Consensus 205 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (325)
T cd08253 205 ILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGSGG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAA 280 (325)
T ss_pred HHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEeecC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHH
Confidence 8887766 8999999999876 78889999998 9999998643 223444444 33367777664332221 1234
Q ss_pred HHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 322 ATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 322 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
+.+.+++.++.+.. ..++.|++++++++++.+.++... |+++.
T Consensus 281 ~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~ 324 (325)
T cd08253 281 EAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGKVVLD 324 (325)
T ss_pred HHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence 55667777776543 356889999999999999886665 88765
No 107
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1.7e-32 Score=256.49 Aligned_cols=297 Identities=22% Similarity=0.247 Sum_probs=235.0
Q ss_pred CCCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeecc
Q 017457 6 GKPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIF 84 (371)
Q Consensus 6 ~~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~ 84 (371)
.+.+++++.|.|++.+++|+||+.++++|+.|.....+.... .+...+.++|+|++|+|+++|+. .+++||+|+..
T Consensus 17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~- 93 (329)
T cd05288 17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGF- 93 (329)
T ss_pred ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecc-
Confidence 446889999999999999999999999999776544443211 11123567899999999999964 79999999542
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeec-ceeEECCCCCC--cchh
Q 017457 85 HRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDI-THVVKITPHIP--LGIA 161 (371)
Q Consensus 85 ~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~-~~~~~~P~~l~--~~~a 161 (371)
++|++|+.++. +.++++|++++ +.++
T Consensus 94 ---------------------------------------------------~~~~~~~~v~~~~~~~~lP~~~~~~~~~~ 122 (329)
T cd05288 94 ---------------------------------------------------LGWQEYAVVDGASGLRKLDPSLGLPLSAY 122 (329)
T ss_pred ---------------------------------------------------cceEEEEEecchhhcEECCcccCCCHHHH
Confidence 27999999999 99999999995 4455
Q ss_pred hc-cccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCC
Q 017457 162 CL-LSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATC 238 (371)
Q Consensus 162 a~-~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~ 238 (371)
+. +++++.|||+++.....+.++++|||+|+ |++|++++++|+++|+ +|+++++++++.+.+++ +|+++++++++
T Consensus 123 ~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~- 200 (329)
T cd05288 123 LGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT- 200 (329)
T ss_pred HHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC-
Confidence 55 88899999998877788999999999996 9999999999999999 89999999999999988 99999998876
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCcee----cCHHH-HhcCceEEEeecc
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPIS----LNSIE-ILKGRSVCGTYFG 313 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~----~~~~~-~~~~~~~~g~~~~ 313 (371)
.++.+.+.+++++++|++||++|+.. +..++++++++ |+++.+|......... ++... +.++.++.+..+.
T Consensus 201 --~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (329)
T cd05288 201 --PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVS 276 (329)
T ss_pred --hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHhhCcceEEeecch
Confidence 67888888877668999999999865 89999999998 9999998643221111 22222 3447888887544
Q ss_pred CCCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 314 GLKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 314 ~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
.... .+.+.++++++.++.+.+.. ...+++++++++++.+.+++.. |++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~~gkvv 328 (329)
T cd05288 277 DYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKNTGKLV 328 (329)
T ss_pred hhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCCcccee
Confidence 3321 24577888999999877552 2558999999999999876654 665
No 108
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=3.2e-32 Score=250.94 Aligned_cols=292 Identities=24% Similarity=0.308 Sum_probs=236.5
Q ss_pred cCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCcccc
Q 017457 16 VEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCK 95 (371)
Q Consensus 16 ~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~ 95 (371)
.|++.+++|+||+.++++|+.|+....+.++... .+|.++|+|++|+|+++|+.++++++||+|++...
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------- 70 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMP-PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------- 70 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCC-CCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----------
Confidence 5788999999999999999999998888754321 56889999999999999999999999999976431
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHH
Q 017457 96 SSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAA 175 (371)
Q Consensus 96 ~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l 175 (371)
... |+|++|+.++++.++++|+++++.+++.+++.+.+||+++
T Consensus 71 ------------------~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l 113 (303)
T cd08251 71 ------------------ESM-------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF 113 (303)
T ss_pred ------------------CCC-------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH
Confidence 011 3899999999999999999999999999999999999976
Q ss_pred HHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-
Q 017457 176 WKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG- 253 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g- 253 (371)
+...+++|++|+|+|+ |.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++... .++.+.+.+++++
T Consensus 114 -~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~ 188 (303)
T cd08251 114 -ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGR 188 (303)
T ss_pred -HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCC
Confidence 5788999999999976 9999999999999999 8999999999999999999999998776 6788888888877
Q ss_pred CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC---C---chhhHHHHHHH
Q 017457 254 GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL---K---PRSDIATLAQK 327 (371)
Q Consensus 254 g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~---~~~~~~~~~~~ 327 (371)
++|+++|++++.. ....+++++++ |+++.+|.........+....+..+..+....+... . ..+.+.+++++
T Consensus 189 ~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (303)
T cd08251 189 GVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSL 266 (303)
T ss_pred CceEEEECCcHHH-HHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHH
Confidence 8999999998755 88999999998 999999864322222333334444554444332111 1 12346778888
Q ss_pred HHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 328 YLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 328 ~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
+.++.+.. +.++.|++++++++++.+.++... |++
T Consensus 267 ~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~iv 302 (303)
T cd08251 267 VEEGELRP--TVSRIFPFDDIGEAYRYLSDRENIGKVV 302 (303)
T ss_pred HHCCCccC--CCceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 98987653 356889999999999999877655 665
No 109
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=4.1e-32 Score=252.07 Aligned_cols=298 Identities=21% Similarity=0.276 Sum_probs=244.9
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+++.+.+.|++.+++|+||+.++++|+.|+....|.++... .+|.++|||++|+|+++|++++++++||+|+...
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~--- 89 (323)
T cd05276 14 VLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPP-GASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL--- 89 (323)
T ss_pred cceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCC-CCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec---
Confidence 467777777888999999999999999999988877654322 5678999999999999999999999999996532
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.+ |+|++|+.++.++++++|+++++.+++.++..
T Consensus 90 ---------------------------~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~ 123 (323)
T cd05276 90 ---------------------------AG-------------------GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEV 123 (323)
T ss_pred ---------------------------CC-------------------CceeEEEEcCHHHhccCCCCCCHHHHhhchhH
Confidence 11 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.++|+++.+...+.++++|+|+|+ |++|+++++++++.|+ +|+++.+++++.+.++++|++.+++... .++.+.
T Consensus 124 ~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 199 (323)
T cd05276 124 FFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT---EDFAEE 199 (323)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHH
Confidence 9999998777788999999999997 9999999999999999 8999999999999998899988888766 677777
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHh-cCceEEEeeccCCC--c-----
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEIL-KGRSVCGTYFGGLK--P----- 317 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~--~----- 317 (371)
+.+++.+ ++|+++|++|+.. ....+++++++ |+++.+|..... ...++...++ ++.++.++...... .
T Consensus 200 ~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (323)
T cd05276 200 VKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGLLGGA-KAELDLAPLLRKRLTLTGSTLRSRSLEEKAALA 276 (323)
T ss_pred HHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEecCCCC-CCCCchHHHHHhCCeEEEeeccchhhhccHHHH
Confidence 8777766 8999999999877 88899999997 999999863322 2344444443 48888887654321 0
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
...+.++++++.++++.+ ..++.|++++++++++.+.++... |++
T Consensus 277 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 322 (323)
T cd05276 277 AAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNEHIGKIV 322 (323)
T ss_pred HHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCCCcceEe
Confidence 123466788888887653 356899999999999999876654 665
No 110
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.1e-32 Score=259.90 Aligned_cols=300 Identities=21% Similarity=0.270 Sum_probs=228.7
Q ss_pred cEEEEEecCCC-CCCeEEEEEeEeecccccccccccCCCC-------------CCCCCCccccccccEEEEEeCCCCCCc
Q 017457 9 LVIEEIEVEPP-KAWEIRIKILCTSLCHSDVTFWKSSTDL-------------PKLPLPVIFGHEAVGVVESVGEYVEEV 74 (371)
Q Consensus 9 l~~~~~~~~~~-~~~eVlVkv~~~~i~~~D~~~~~g~~~~-------------~~~~~p~~~G~e~~G~Vv~vG~~v~~~ 74 (371)
+++++.+.|+| .++||+||+.++++|++|+....|.... ....+|.++|||++|+|+++|+.++++
T Consensus 16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~ 95 (350)
T cd08248 16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF 95 (350)
T ss_pred eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence 78889999999 4999999999999999999988774210 012568899999999999999999999
Q ss_pred CCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCC
Q 017457 75 KERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITP 154 (371)
Q Consensus 75 ~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~ 154 (371)
++||+|+..... .. .|+|++|+.++++.++++|+
T Consensus 96 ~~Gd~V~~~~~~---------------------------~~-------------------~g~~~~~~~v~~~~~~~lp~ 129 (350)
T cd08248 96 EIGDEVWGAVPP---------------------------WS-------------------QGTHAEYVVVPENEVSKKPK 129 (350)
T ss_pred CCCCEEEEecCC---------------------------CC-------------------CccceeEEEecHHHeecCCC
Confidence 999999764320 01 14899999999999999999
Q ss_pred CCCcchhhccccchhhhHHHHHHHcCCCC----CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc
Q 017457 155 HIPLGIACLLSCGVSTGVGAAWKVAGVEV----GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI 229 (371)
Q Consensus 155 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~----g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga 229 (371)
++++.+++.+++.+.|||+++.+...+.+ |++|+|+|+ |++|++++++|+++|+ +|+++.++ ++.+.++++|+
T Consensus 130 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~-~~~~~~~~~g~ 207 (350)
T cd08248 130 NLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTCST-DAIPLVKSLGA 207 (350)
T ss_pred CCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCc-chHHHHHHhCC
Confidence 99999999999999999998766666654 999999996 9999999999999999 78888754 67778888999
Q ss_pred ceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCc--eec-----C-HHHH
Q 017457 230 TDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSP--ISL-----N-SIEI 301 (371)
Q Consensus 230 ~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~--~~~-----~-~~~~ 301 (371)
+++++... .++.+.+... +++|++||++++.. ...++++++++ |+++.+|....... ... . ...+
T Consensus 208 ~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 280 (350)
T cd08248 208 DDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVTLVSPLLKNTDKLGLVGGMLKSAVDL 280 (350)
T ss_pred ceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEEecCCcccccccccccchhhhhHHHH
Confidence 88888765 4555544332 38999999999885 89999999998 99999985321111 011 0 0011
Q ss_pred hc-Cce-EE-Ee---eccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 302 LK-GRS-VC-GT---YFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 302 ~~-~~~-~~-g~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
.. ... +. +. +.........+.+++++++++.+.. .+++.|++++++++++.+.+++.. |+++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 281 LKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKP--VIDKVFPFEEVPEAYEKVESGHARGKTVI 349 (350)
T ss_pred HHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEec--ccceeecHHHHHHHHHHHhcCCCceEEEe
Confidence 11 100 00 00 0000112456888999999997653 356899999999999999877654 7765
No 111
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.1e-31 Score=250.35 Aligned_cols=302 Identities=16% Similarity=0.202 Sum_probs=235.7
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+++++.|.|+|.++||+||+.++++|++|.....|.+...+ .+|.++|||++|+|++ ++++++++||+|++...
T Consensus 14 ~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~-- 88 (324)
T cd08288 14 SAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVR-TFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGW-- 88 (324)
T ss_pred ceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccC-CCCCccccceEEEEEe--CCCCCCCCCCEEEECCc--
Confidence 588999999999999999999999999999998877653221 4577899999999998 77788999999977421
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
+ .+.... |+|++|+.++.+.++++|+++++++++.+++.
T Consensus 89 -~---------------------~~~~~~-------------------g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~ 127 (324)
T cd08288 89 -G---------------------VGERHW-------------------GGYAQRARVKADWLVPLPEGLSARQAMAIGTA 127 (324)
T ss_pred -c---------------------CCCCCC-------------------CcceeEEEEchHHeeeCCCCCCHHHHhhhhhH
Confidence 0 111112 48999999999999999999999999999999
Q ss_pred hhhhHHHHH--HHcCCC-CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccH
Q 017457 168 VSTGVGAAW--KVAGVE-VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTV 243 (371)
Q Consensus 168 ~~ta~~~l~--~~~~~~-~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~ 243 (371)
+++|++++. +..+.. ++++|||+|+ |++|++++|+|+++|+ +|++++.++++.+.++++|+++++++++ .
T Consensus 128 ~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~-----~ 201 (324)
T cd08288 128 GFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE-----L 201 (324)
T ss_pred HHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch-----h
Confidence 999987643 123455 5789999998 9999999999999999 8999998999999999999999998765 2
Q ss_pred HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCCC---chh
Q 017457 244 SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGLK---PRS 319 (371)
Q Consensus 244 ~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~---~~~ 319 (371)
...+..++.+++|.++|++++.. +...+..++.+ |+++.+|.... ....++...+ .++.++.+..+.... ..+
T Consensus 202 ~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (324)
T cd08288 202 SEPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRA 278 (324)
T ss_pred hHhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEeecccchhhHH
Confidence 23555666557899999999755 77888889987 99999987422 2223444444 458888887533322 123
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
.+..+.+++.++.+.+ +.+.++++++++|++.+.+++.. |+++.+
T Consensus 279 ~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 279 AWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred HHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 4566777777886643 35899999999999999887766 888753
No 112
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=8.6e-32 Score=250.69 Aligned_cols=300 Identities=21% Similarity=0.271 Sum_probs=242.4
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 88 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 88 (371)
+.+++.+.|++.+++|+|++.++++|++|..+..+...... ..|.++|||++|+|+.+|+.+++|++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~-- 91 (326)
T cd08272 15 FELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARP-PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGG-- 91 (326)
T ss_pred eEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCC--
Confidence 77778888889999999999999999999998877654222 457789999999999999999999999999764310
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457 89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168 (371)
Q Consensus 89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (371)
.+ .. .|+|++|+.++.++++++|+++++.+++.+++.+
T Consensus 92 ----------------------~~-~~-------------------~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~ 129 (326)
T cd08272 92 ----------------------LG-GL-------------------QGSLAEYAVVDARLLALKPANLSMREAAALPLVG 129 (326)
T ss_pred ----------------------cC-CC-------------------CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHH
Confidence 00 01 1489999999999999999999999999999999
Q ss_pred hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457 169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 247 (371)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i 247 (371)
.+||+++.+..+++++++++|+|+ |.+|++++++|+.+|+ +|+++.++ ++.+.++++|++.+++... . +.+.+
T Consensus 130 ~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~ 203 (326)
T cd08272 130 ITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYV 203 (326)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHH
Confidence 999998878889999999999996 9999999999999999 89998887 8888998899988888766 5 77888
Q ss_pred HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccC--C---C---ch
Q 017457 248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGG--L---K---PR 318 (371)
Q Consensus 248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~---~---~~ 318 (371)
.+++.+ ++|+++|++++.. ....+++++++ |+++.++... ...+... ..++.++.+..+.. . . ..
T Consensus 204 ~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T cd08272 204 AEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLLPLLTGEGRAHHG 277 (326)
T ss_pred HHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEcccccccccchhhHH
Confidence 888877 8999999999866 88899999997 9999998642 1122211 13467777665332 1 1 13
Q ss_pred hhHHHHHHHHHcCCCCCCCcee-EEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 319 SDIATLAQKYLDKELNLGEFIT-HEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
..+..++++++++.+.. .++ +.|++++++++++.+.+++.. |+++++
T Consensus 278 ~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 278 EILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred HHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 45777888888886653 334 889999999999999876655 888753
No 113
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.1e-31 Score=253.41 Aligned_cols=310 Identities=20% Similarity=0.222 Sum_probs=229.0
Q ss_pred ccCCCCcEEEEEecCCC---CCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCC-CcCCCC
Q 017457 3 RIPGKPLVIEEIEVEPP---KAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVE-EVKERD 78 (371)
Q Consensus 3 ~~~~~~l~~~~~~~~~~---~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~-~~~~Gd 78 (371)
.+++..+++++++.|.| .+++|+||+.++++|++|+....+..... ...|.++|+|++|+|+++|++++ +|++||
T Consensus 7 ~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd 85 (352)
T cd08247 7 KNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHF-KVKEKGLGRDYSGVIVKVGSNVASEWKVGD 85 (352)
T ss_pred ecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccccc-ccCCCccCceeEEEEEEeCcccccCCCCCC
Confidence 34555677777777665 89999999999999999998775432211 12477899999999999999998 899999
Q ss_pred EEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecc----eeEECCC
Q 017457 79 LVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDIT----HVVKITP 154 (371)
Q Consensus 79 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~----~~~~~P~ 154 (371)
+|++.....| ... |+|++|++++.. .++++|+
T Consensus 86 ~V~~~~~~~~-------------------------~~~-------------------g~~~~~~~v~~~~~~~~~~~lP~ 121 (352)
T cd08247 86 EVCGIYPHPY-------------------------GGQ-------------------GTLSQYLLVDPKKDKKSITRKPE 121 (352)
T ss_pred EEEEeecCCC-------------------------CCC-------------------ceeeEEEEEccccccceeEECCC
Confidence 9987543110 011 489999999987 7999999
Q ss_pred CCCcchhhccccchhhhHHHHHHHc-CCCCCCeEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCcce
Q 017457 155 HIPLGIACLLSCGVSTGVGAAWKVA-GVEVGSTVAIFGL-GAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITD 231 (371)
Q Consensus 155 ~l~~~~aa~~~~~~~ta~~~l~~~~-~~~~g~~VLI~G~-g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~ 231 (371)
++++.+++.+++++.|||+++.... .+++|++|+|+|+ |.+|++++++|+++|. ++|+++. ++++.+.++++|+++
T Consensus 122 ~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~ 200 (352)
T cd08247 122 NISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADH 200 (352)
T ss_pred CCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCE
Confidence 9999999999999999999876666 7999999999998 8999999999998854 3566665 456666788899999
Q ss_pred EEcCCCCCCcc---HHHHHHHh-hCC-CcCEEEECCCChHHHHHHHHHhh---cCCceEEEECccCCCCce---------
Q 017457 232 FINPATCGDKT---VSQVIKEM-TDG-GADYCFECIGLTSVMNDAFNSSR---EGWGKTVILGVEMHGSPI--------- 294 (371)
Q Consensus 232 v~~~~~~~~~~---~~~~i~~~-~~g-g~d~vid~~g~~~~~~~~~~~l~---~~~G~~v~~g~~~~~~~~--------- 294 (371)
+++.++ .+ +...+.+. +++ ++|++|||+|+......++++++ ++ |+++.++........
T Consensus 201 ~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~~~~~~~~~~~~~~ 276 (352)
T cd08247 201 FIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYKANYKKDTFNSWDN 276 (352)
T ss_pred EEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCcccccchhhhhccc
Confidence 998766 33 44444444 424 99999999998655889999999 98 999987532211000
Q ss_pred -ecCHHHHhcCc-----eEEEeeccCCCchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 295 -SLNSIEILKGR-----SVCGTYFGGLKPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 295 -~~~~~~~~~~~-----~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.+....+..+. .+.... ... ..+.++++++++.++.+.+ +.++.++++++++|++.+.+++.. |++++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 277 PSANARKLFGSLGLWSYNYQFFL-LDP-NADWIEKCAELIADGKVKP--PIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred cchhhhhhhhhhcCCCcceEEEE-ecC-CHHHHHHHHHHHhCCCeEe--eeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 01111121122 222111 111 1245788999999997653 356899999999999999887655 88875
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.5e-32 Score=252.60 Aligned_cols=297 Identities=22% Similarity=0.281 Sum_probs=232.8
Q ss_pred CCcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 7 KPLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 7 ~~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
..+++++.+.|+|.+++|+|++.++++|++|..+..|...... .+|.++|||++|+|+.+|+.++.|++||+|.....
T Consensus 13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~- 90 (331)
T cd08273 13 EVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQP-PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTR- 90 (331)
T ss_pred ccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCC-CCCcccccceEEEEEEeCCCCccCCCCCEEEEeCC-
Confidence 4588888999999999999999999999999998888764322 56889999999999999999999999999966421
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
. |+|++|+.++.+.++++|+++++.+++.+++
T Consensus 91 -----------------------------~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~ 122 (331)
T cd08273 91 -----------------------------V-------------------GGNAEYINLDAKYLVPVPEGVDAAEAVCLVL 122 (331)
T ss_pred -----------------------------C-------------------cceeeEEEechHHeEECCCCCCHHHHHhhhh
Confidence 1 3899999999999999999999999999999
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
++.+||+++.....+.++++|+|+|+ |++|++++++|+.+|+ +|++++. +++.+.++++|+.. ++... .++..
T Consensus 123 ~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~ 196 (331)
T cd08273 123 NYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLP 196 (331)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhh
Confidence 99999998777788999999999997 9999999999999999 8999987 88888898899754 44443 34443
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecC--HH-----------HHhc--CceEEEe
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLN--SI-----------EILK--GRSVCGT 310 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~--~~-----------~~~~--~~~~~g~ 310 (371)
. +..++++|++++++++.. ...++++++++ |+++.+|.........+. .. .... +.++.+.
T Consensus 197 ~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (331)
T cd08273 197 A--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYV 272 (331)
T ss_pred h--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEee
Confidence 3 334458999999999888 89999999998 999999864332221111 10 0111 2222222
Q ss_pred eccCC-C---chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 311 YFGGL-K---PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 311 ~~~~~-~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
..... . ..+.+++++++++++.+.. .+.+.+++++++++++.+.+++.. |+++
T Consensus 273 ~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 273 WRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred chhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 21110 0 1356788999999997754 356889999999999998876655 6664
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-31 Score=249.43 Aligned_cols=298 Identities=24% Similarity=0.287 Sum_probs=238.2
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+++.|.|++.+++|+||+.++++|++|+....+..... ..|.++|||++|+|+.+|+.++++++||+|++...
T Consensus 14 ~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-- 89 (325)
T cd08271 14 QLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW--SYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS-- 89 (325)
T ss_pred eeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC--CCCcccccceEEEEEEeCCCCCcCCCCCEEEeccC--
Confidence 68899999999999999999999999999998887765432 34678999999999999999999999999976431
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
+... |+|++|+.++.+.++++|+++++.+++.+.+.
T Consensus 90 -------------------------~~~~-------------------~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~ 125 (325)
T cd08271 90 -------------------------LARG-------------------GSFAEYTVVDARAVLPLPDSLSFEEAAALPCA 125 (325)
T ss_pred -------------------------CCCC-------------------ccceeEEEeCHHHeEECCCCCCHHHHHhhhhh
Confidence 1112 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+|++++.....+++|++++|+|+ |++|++++++|++.|+ +|+++. ++++.+.+.++|++.+++... .++.+.
T Consensus 126 ~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 200 (325)
T cd08271 126 GLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYND---EDVCER 200 (325)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHH
Confidence 9999998877788999999999998 8999999999999999 788876 677888888899998888766 667778
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeec-----cCC-----
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYF-----GGL----- 315 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~----- 315 (371)
+.+++.+ ++|++++++++.. ....+++++++ |+++.++..... . . ...+..+..+....+ ...
T Consensus 201 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~~~-~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (325)
T cd08271 201 IKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRPDA-S-P--DPPFTRALSVHEVALGAAHDHGDPAAWQ 274 (325)
T ss_pred HHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCCCC-c-c--hhHHhhcceEEEEEecccccccchhhHH
Confidence 8888776 8999999999877 67789999998 999999753221 1 1 111222333332221 111
Q ss_pred CchhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 316 KPRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
...+.+.+++++++++.+.+. ..+.|+++++.++++.+.++... |++++
T Consensus 275 ~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~ 324 (325)
T cd08271 275 DLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVT 324 (325)
T ss_pred HHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEE
Confidence 112345678888988876543 44889999999999999877655 88775
No 116
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.5e-31 Score=245.93 Aligned_cols=305 Identities=26% Similarity=0.330 Sum_probs=244.3
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+.+.+.|++.+++|+|+|.++++|+.|+....+.+... ..+|.++|||++|+|+.+|++++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-- 90 (328)
T cd08268 14 VLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP-PPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA-- 90 (328)
T ss_pred eeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC-CCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccc--
Confidence 46677777788999999999999999999998887765432 145778999999999999999999999999977532
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
.++... |+|++|+.++.+.++++|+++++.+++.+++.
T Consensus 91 -----------------------~~~~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (328)
T cd08268 91 -----------------------ADLGQY-------------------GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQ 128 (328)
T ss_pred -----------------------cccCCC-------------------ccceEEEEechHhcEeCCCCCCHHHHHHhhhH
Confidence 111122 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+||+++.....+.++++++|+|+ |++|++++++++..|+ +++.+++++++.+.+.++|++.+++.+. .++.+.
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~ 204 (328)
T cd08268 129 YLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAE 204 (328)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHH
Confidence 9999998877788999999999998 9999999999999999 8999999999999998899888888766 677777
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH-HHhcCceEEEeeccCC-Cch----h
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI-EILKGRSVCGTYFGGL-KPR----S 319 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~-~~~----~ 319 (371)
+.+.+.+ ++|++++++++.. ...++++++++ |+++.+|.... ....++.. .+.++.++.+...... ... .
T Consensus 205 ~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (328)
T cd08268 205 VLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRR 281 (328)
T ss_pred HHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHH
Confidence 8877776 8999999999865 88999999998 99999986432 22233333 3445788877654321 111 2
Q ss_pred hHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 320 DIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
.++.+.+++.++.+... .+..|++++++++++.+.+++.. |++++
T Consensus 282 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~ 327 (328)
T cd08268 282 AIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVT 327 (328)
T ss_pred HHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence 24445566667765543 45889999999999998877655 88775
No 117
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=4.6e-31 Score=245.54 Aligned_cols=299 Identities=21% Similarity=0.258 Sum_probs=245.0
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 88 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 88 (371)
+.+.+.+.+++.+++|+||+.++++|+.|+....+.+..+. .+|.++|||++|+|+.+|+.+.++++||+|+...
T Consensus 15 ~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~-~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~---- 89 (325)
T TIGR02824 15 LVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPP-GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV---- 89 (325)
T ss_pred ceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCC-CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc----
Confidence 66667777778999999999999999999988877654321 4678999999999999999999999999996531
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457 89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168 (371)
Q Consensus 89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (371)
.+ |+|++|+.++.+.++++|+++++.+++.+++++
T Consensus 90 --------------------------~~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 124 (325)
T TIGR02824 90 --------------------------AG-------------------GGYAEYVAVPAGQVLPVPEGLSLVEAAALPETF 124 (325)
T ss_pred --------------------------CC-------------------CcceeEEEecHHHcEeCCCCCCHHHHHhhhHHH
Confidence 11 389999999999999999999999999999999
Q ss_pred hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457 169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 247 (371)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i 247 (371)
.+||+++.+...++++++++|+|+ |++|++++++++.+|+ +|+++.+++++.+.++++|++.+++... .++...+
T Consensus 125 ~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~ 200 (325)
T TIGR02824 125 FTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVV 200 (325)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHH
Confidence 999998778889999999999997 9999999999999999 8999999999988888899888887665 5677788
Q ss_pred HHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hcCceEEEeeccCC-Cc------h
Q 017457 248 KEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LKGRSVCGTYFGGL-KP------R 318 (371)
Q Consensus 248 ~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~-~~------~ 318 (371)
..++.+ ++|++++++++.. ....+++++++ |+++.+|...... ..++...+ .++.++.+...... .. .
T Consensus 201 ~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (325)
T TIGR02824 201 KAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQGGRK-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAA 277 (325)
T ss_pred HHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecCCCCc-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHH
Confidence 887776 8999999999865 88999999998 9999998633222 24555554 44889998865442 10 1
Q ss_pred hhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEE
Q 017457 319 SDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIW 366 (371)
Q Consensus 319 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~ 366 (371)
..+.+++++++++.+.. ..++.+++++++++++.+.++... |++++
T Consensus 278 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 324 (325)
T TIGR02824 278 ELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDHIGKIVLT 324 (325)
T ss_pred HHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCCcceEEEe
Confidence 23456778888886653 356889999999999998877655 87765
No 118
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.2e-30 Score=242.39 Aligned_cols=296 Identities=22% Similarity=0.255 Sum_probs=227.0
Q ss_pred EEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCC-CCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCC
Q 017457 10 VIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLP-KLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDC 88 (371)
Q Consensus 10 ~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~-~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~ 88 (371)
++++.+.|+|.++||+|++.++++|++|+....|..... ....|..+|||++|+|+++|++++++++||+|+.....
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-- 92 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP-- 92 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence 777889999999999999999999999999887765210 01356689999999999999999999999999765320
Q ss_pred CCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccch
Q 017457 89 GECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGV 168 (371)
Q Consensus 89 ~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~ 168 (371)
... |+|++|+.++.+.++++|+++++.+++.+++.+
T Consensus 93 -------------------------~~~-------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 93 -------------------------KGG-------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred -------------------------CCC-------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 011 389999999999999999999999999999999
Q ss_pred hhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457 169 STGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVI 247 (371)
Q Consensus 169 ~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i 247 (371)
.+||+++.....+++|++|+|+|+ |++|++++++|+.+|+ +|++++++ ++.+.++++|++++++.+. .++.
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~--- 200 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV--- 200 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---
Confidence 999998777777999999999998 9999999999999999 89888865 8888888999988887665 3443
Q ss_pred HHhhCC-CcCEEEECCCChH-HHHHHHHHhhcCCceEEEECccCCCCceec---CHHHHhcCceEEEeeccCCCchhhHH
Q 017457 248 KEMTDG-GADYCFECIGLTS-VMNDAFNSSREGWGKTVILGVEMHGSPISL---NSIEILKGRSVCGTYFGGLKPRSDIA 322 (371)
Q Consensus 248 ~~~~~g-g~d~vid~~g~~~-~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~ 322 (371)
...+.+ ++|++++|+++.. .....+..++++ |+++.+|.......... ..........+....... ..+.+.
T Consensus 201 ~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 277 (319)
T cd08267 201 ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP--NAEDLE 277 (319)
T ss_pred hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC--CHHHHH
Confidence 344455 8999999998532 233444448997 99999986432221111 111122223333322111 156788
Q ss_pred HHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 323 TLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 323 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
+++++++++++.. +.++.|+++++++|++.+.++... |++
T Consensus 278 ~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vv 318 (319)
T cd08267 278 QLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVV 318 (319)
T ss_pred HHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEe
Confidence 9999999987653 366899999999999999876554 655
No 119
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=4.8e-30 Score=240.22 Aligned_cols=301 Identities=21% Similarity=0.319 Sum_probs=238.9
Q ss_pred CcEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 8 PLVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 8 ~l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
.+.+.+.+.|+|.+++|+||+.++++|+.|.....|.+... +..|.++|||++|+|+.+|+.++++++||+|+....
T Consensus 13 ~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~-- 89 (337)
T cd08275 13 KLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSA-PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTR-- 89 (337)
T ss_pred ceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCC-CCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecC--
Confidence 47777778888999999999999999999999888765432 156778999999999999999999999999976421
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
. |+|++|+.++.+.++++|+++++.+++.++++
T Consensus 90 ----------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~ 122 (337)
T cd08275 90 ----------------------------F-------------------GGYAEVVNVPADQVFPLPDGMSFEEAAAFPVN 122 (337)
T ss_pred ----------------------------C-------------------CeeeeEEEecHHHeEECCCCCCHHHHhhhhHH
Confidence 1 38999999999999999999999999999999
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
+.+||+++.....++++++|+|+|+ |.+|++++++|+++ +. .++.. ..+++.+.++.+|++.+++.+. .++.+
T Consensus 123 ~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~~~---~~~~~ 197 (337)
T cd08275 123 YLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDYRT---QDYVE 197 (337)
T ss_pred HHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeCCC---CcHHH
Confidence 9999998877888999999999998 99999999999998 44 33332 2456788888899988888776 67888
Q ss_pred HHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCC--ce-------------ecCHHH-HhcCceEEE
Q 017457 246 VIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGS--PI-------------SLNSIE-ILKGRSVCG 309 (371)
Q Consensus 246 ~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~--~~-------------~~~~~~-~~~~~~~~g 309 (371)
.++.++++++|+++|++++.. ...++++++++ |+++.+|...... .. .+.... +..+.++.+
T Consensus 198 ~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (337)
T cd08275 198 EVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLG 275 (337)
T ss_pred HHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEE
Confidence 888877668999999999875 88999999998 9999998632211 11 111122 333788888
Q ss_pred eeccCCC-c----hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 310 TYFGGLK-P----RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 310 ~~~~~~~-~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
+.+.... . ...+.++++++.++.+.+. .++.|++++++++++.+.+++.. |+++++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 276 FNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred eechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 7543221 1 1236778888889876543 56889999999999999887655 888753
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.98 E-value=1.4e-30 Score=238.04 Aligned_cols=281 Identities=22% Similarity=0.223 Sum_probs=229.8
Q ss_pred CeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCC
Q 017457 22 WEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNT 101 (371)
Q Consensus 22 ~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~ 101 (371)
+||+||+.++++|++|++...|.. . .+|.++|||++|+|+++|+.++++++||+|+....
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~--~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~---------------- 60 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--P--GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAP---------------- 60 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--C--CCCCccceeeeEEEEeecCCccCCCCCCEEEEEec----------------
Confidence 589999999999999999888764 2 45778999999999999999999999999966421
Q ss_pred CCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCC
Q 017457 102 CSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGV 181 (371)
Q Consensus 102 ~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~ 181 (371)
|+|++|+.++.+.++++|+++++.+++.+++++.+|++++.+...+
T Consensus 61 ----------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 106 (293)
T cd05195 61 ----------------------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARL 106 (293)
T ss_pred ----------------------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhcc
Confidence 4899999999999999999999999999989999999987777889
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC--cceEEcCCCCCCccHHHHHHHhhCC-CcCE
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG--ITDFINPATCGDKTVSQVIKEMTDG-GADY 257 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg--a~~v~~~~~~~~~~~~~~i~~~~~g-g~d~ 257 (371)
++|++|+|+|+ |++|++++++|+.+|+ +|+++.+++++.+.++++| ++.+++... .++.+.+.+++.+ ++|+
T Consensus 107 ~~g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~ 182 (293)
T cd05195 107 QKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDV 182 (293)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceE
Confidence 99999999986 9999999999999999 8999998999999998888 778888766 6788888888877 8999
Q ss_pred EEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCC------chhhHHHHHHHHHcC
Q 017457 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLK------PRSDIATLAQKYLDK 331 (371)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~~~~~~~~~~~~g 331 (371)
+++++++.. +..++++++++ |+++.+|.........+....+..+.++.+..+.... ..+.+.+++++++++
T Consensus 183 vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (293)
T cd05195 183 VLNSLSGEL-LRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAG 260 (293)
T ss_pred EEeCCCchH-HHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCC
Confidence 999999885 99999999998 9999998643221122333333335566654332211 123467788999999
Q ss_pred CCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 332 ELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
++. +..+..+++++++++++.+.+++.. |++
T Consensus 261 ~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~iv 292 (293)
T cd05195 261 VLK--PLPPTVVPSASEIDAFRLMQSGKHIGKVV 292 (293)
T ss_pred Ccc--cCCCeeechhhHHHHHHHHhcCCCCceec
Confidence 765 3456789999999999999887665 655
No 121
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.98 E-value=1.8e-30 Score=239.81 Aligned_cols=290 Identities=20% Similarity=0.284 Sum_probs=231.2
Q ss_pred cEEEEEecCCCCCCeEEEEEeEeecccccccccccCCCC-CCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCC
Q 017457 9 LVIEEIEVEPPKAWEIRIKILCTSLCHSDVTFWKSSTDL-PKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRD 87 (371)
Q Consensus 9 l~~~~~~~~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~-~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~ 87 (371)
+.+++.+.|++.++||+|++.++++|+.|+....|.... ....+|.++|||++|+|+.+|++++++++||+|+..+.
T Consensus 15 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~-- 92 (309)
T cd05289 15 LELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP-- 92 (309)
T ss_pred eeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC--
Confidence 556677778899999999999999999999988776531 11155789999999999999999999999999977532
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccc
Q 017457 88 CGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCG 167 (371)
Q Consensus 88 ~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~ 167 (371)
. ... |+|++|+.++...++++|+++++.+++.+++.
T Consensus 93 -----------------------~--~~~-------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 128 (309)
T cd05289 93 -----------------------F--TRG-------------------GAYAEYVVVPADELALKPANLSFEEAAALPLA 128 (309)
T ss_pred -----------------------C--CCC-------------------CcceeEEEecHHHhccCCCCCCHHHHHhhhHH
Confidence 0 011 38999999999999999999999999999989
Q ss_pred hhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 168 VSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 168 ~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+.+|++++.....+.++++|+|+|+ |.+|++++++++..|+ +|+++..++ +.+.++++|++++++.+. .++.+
T Consensus 129 ~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~- 202 (309)
T cd05289 129 GLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER- 202 (309)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh-
Confidence 9999998766667999999999997 9999999999999999 888888777 888888899888887665 34433
Q ss_pred HHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHHH
Q 017457 247 IKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATLA 325 (371)
Q Consensus 247 i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 325 (371)
.+.+ ++|++++++++.. ...++++++++ |+++.+|..... .. ..+..+.++....+... ...+..++
T Consensus 203 ---~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~--~~---~~~~~~~~~~~~~~~~~--~~~~~~~~ 270 (309)
T cd05289 203 ---AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIAGPPPA--EQ---AAKRRGVRAGFVFVEPD--GEQLAELA 270 (309)
T ss_pred ---ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEcCCCcc--hh---hhhhccceEEEEEeccc--HHHHHHHH
Confidence 3334 8999999999885 89999999998 999999863321 11 22233566665543222 46788899
Q ss_pred HHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 326 QKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 326 ~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
++++++.+.. .+++.|++++++++++.+.++... |++
T Consensus 271 ~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 271 ELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred HHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 9999987543 366899999999999998876654 655
No 122
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.98 E-value=6.5e-30 Score=237.46 Aligned_cols=298 Identities=25% Similarity=0.406 Sum_probs=241.5
Q ss_pred CcEEEEEecCCCC-CCeEEEEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 8 PLVIEEIEVEPPK-AWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 8 ~l~~~~~~~~~~~-~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
.+++.+.+ |++. +++|+|++.++++|++|+....|.+.... ..|.++|||++|+|+.+|+++.++++||+|+....
T Consensus 14 ~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~- 90 (323)
T cd08241 14 DLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKP-PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTG- 90 (323)
T ss_pred eeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCC-CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecC-
Confidence 46666776 6666 49999999999999999988877653221 44668999999999999999999999999976430
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhcccc
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSC 166 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~ 166 (371)
. |+|++|+.++.+.++++|+++++.+++.+.+
T Consensus 91 -----------------------------~-------------------~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~ 122 (323)
T cd08241 91 -----------------------------Q-------------------GGFAEEVVVPAAAVFPLPDGLSFEEAAALPV 122 (323)
T ss_pred -----------------------------C-------------------ceeEEEEEcCHHHceeCCCCCCHHHHhhhhh
Confidence 1 3899999999999999999999999988888
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~ 245 (371)
.+.+|++++.....+.++++|+|+|+ |++|++++++|+..|+ +|++++.++++.+.++++|++.+++... .++.+
T Consensus 123 ~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~ 198 (323)
T cd08241 123 TYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYRD---PDLRE 198 (323)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHH
Confidence 99999998776788999999999998 9999999999999999 8999999999999998899988888766 67888
Q ss_pred HHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH-HHHhcCceEEEeeccCCCc------
Q 017457 246 VIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS-IEILKGRSVCGTYFGGLKP------ 317 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~------ 317 (371)
.+.+.+.+ ++|++++++|+.. ...++++++++ |+++.+|...... ..+.. ..+.++.++.+..+..+..
T Consensus 199 ~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (323)
T cd08241 199 RVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFASGEI-PQIPANLLLLKNISVVGVYWGAYARREPELL 275 (323)
T ss_pred HHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccCCCCc-CcCCHHHHhhcCcEEEEEecccccchhHHHH
Confidence 88888777 8999999999855 88999999998 9999998632211 11222 2234478888876544321
Q ss_pred hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 318 RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
...+.++++++.++.+.. +.++.|++++++++++.+.++... |+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv 322 (323)
T cd08241 276 RANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVL 322 (323)
T ss_pred HHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 245677889999987643 356889999999999988876654 7765
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.97 E-value=5.4e-30 Score=233.95 Aligned_cols=276 Identities=21% Similarity=0.259 Sum_probs=224.4
Q ss_pred EEEeEeecccccccccccCCCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCC
Q 017457 26 IKILCTSLCHSDVTFWKSSTDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKF 105 (371)
Q Consensus 26 Vkv~~~~i~~~D~~~~~g~~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~ 105 (371)
||+.++++|++|++...|.++ .|.++|||++|+|+++|+.++.|++||+|+....
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~-----~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------- 56 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP-----GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-------------------- 56 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC-----CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC--------------------
Confidence 899999999999999887643 3568999999999999999999999999966421
Q ss_pred CCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCC
Q 017457 106 GRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGS 185 (371)
Q Consensus 106 ~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~ 185 (371)
|+|++|+.++.+.++++|+++++.+++.+++.+.++++++.....+.+|+
T Consensus 57 ------------------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~ 106 (288)
T smart00829 57 ------------------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGE 106 (288)
T ss_pred ------------------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCC
Confidence 38999999999999999999999999999999999999877778899999
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--ceEEcCCCCCCccHHHHHHHhhCC-CcCEEEEC
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTDG-GADYCFEC 261 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~ 261 (371)
+|+|+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|+ +.++++.. .++.+.+.+.+++ ++|+++|+
T Consensus 107 ~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~ 182 (288)
T smart00829 107 SVLIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNS 182 (288)
T ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeC
Confidence 9999986 9999999999999999 89999999999999999998 77888766 6787888887776 89999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCC--C---chhhHHHHHHHHHcCCCCCC
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGL--K---PRSDIATLAQKYLDKELNLG 336 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~---~~~~~~~~~~~~~~g~~~~~ 336 (371)
+++.. ....+++++++ |+++.+|.........++...+..+.++.+..+... . ..+.+..++++++++++.+.
T Consensus 183 ~~~~~-~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (288)
T smart00829 183 LAGEF-LDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL 260 (288)
T ss_pred CCHHH-HHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc
Confidence 99654 88899999997 999999864211122333333334666666543211 1 12346778888888876643
Q ss_pred CceeEEEecccHHHHHHHHhcCcee-eEE
Q 017457 337 EFITHEVSFHDINKAFDLLLEGKSL-RCI 364 (371)
Q Consensus 337 ~~~~~~~~~~~~~~a~~~~~~~~~~-kvv 364 (371)
..+.|++++++++++.+.++... |++
T Consensus 261 --~~~~~~~~~~~~~~~~~~~~~~~~~iv 287 (288)
T smart00829 261 --PVTVFPISDVEDAFRYMQQGKHIGKVV 287 (288)
T ss_pred --CceEEcHHHHHHHHHHHhcCCCcceEe
Confidence 34789999999999999887654 655
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=1.3e-28 Score=242.96 Aligned_cols=295 Identities=17% Similarity=0.135 Sum_probs=247.1
Q ss_pred CcEEEEEecC---CCCCCeEEEEEeEeecccccccccccCCCCCC-----CCCCccccccccEEEEEeCCCCCCcCCCCE
Q 017457 8 PLVIEEIEVE---PPKAWEIRIKILCTSLCHSDVTFWKSSTDLPK-----LPLPVIFGHEAVGVVESVGEYVEEVKERDL 79 (371)
Q Consensus 8 ~l~~~~~~~~---~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~-----~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~ 79 (371)
.+++.+.|.. +..++.=+.-|-|++||..|++...|+.+... ......+|-|++|+ .+-|.|
T Consensus 1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrR 1497 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRR 1497 (2376)
T ss_pred ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcE
Confidence 4566666643 45677779999999999999999999876541 12335789999886 567999
Q ss_pred EeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEECCCCCCcc
Q 017457 80 VLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKITPHIPLG 159 (371)
Q Consensus 80 V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~P~~l~~~ 159 (371)
|.. +-.-. ++++.+.++.+++|.+|++.+++
T Consensus 1498 vM~------------------------------mvpAk-------------------sLATt~l~~rd~lWevP~~WTle 1528 (2376)
T KOG1202|consen 1498 VMG------------------------------MVPAK-------------------SLATTVLASRDFLWEVPSKWTLE 1528 (2376)
T ss_pred EEE------------------------------eeehh-------------------hhhhhhhcchhhhhhCCcccchh
Confidence 943 33222 78999999999999999999999
Q ss_pred hhhccccchhhhHHHHHHHcCCCCCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEc
Q 017457 160 IACLLSCGVSTGVGAAWKVAGVEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFIN 234 (371)
Q Consensus 160 ~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~ 234 (371)
+|+..||.|.||||+|..+++.++|+++||++ +|++|++||.+|.+.|+ +|+.+..++||++++++ +-..++-|
T Consensus 1529 eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~N 1607 (2376)
T KOG1202|consen 1529 EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFAN 1607 (2376)
T ss_pred hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccc
Confidence 99999999999999999999999999999995 49999999999999999 99999999999999876 33567778
Q ss_pred CCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeecc
Q 017457 235 PATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFG 313 (371)
Q Consensus 235 ~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~ 313 (371)
+++ .+|.+-+...|.| |+|+|+|+...+. ++.+++||..+ |+|..+|-..-....++.+..|++|.+++|..+.
T Consensus 1608 SRd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLD 1682 (2376)
T KOG1202|consen 1608 SRD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLD 1682 (2376)
T ss_pred ccc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehh
Confidence 777 8999999999999 9999999999988 99999999998 9999999644444556777778889999998765
Q ss_pred CCC--chhhHHHHHHHHHcCCCC--CCCceeEEEecccHHHHHHHHhcCcee-eEEEEe
Q 017457 314 GLK--PRSDIATLAQKYLDKELN--LGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWM 367 (371)
Q Consensus 314 ~~~--~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~ 367 (371)
..- +.+++.++..++++|.-. ..++-+++|+=.++++||+++.++++. |||+++
T Consensus 1683 svmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1683 SVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred hhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEE
Confidence 443 345678888998887433 456668999999999999999999987 999986
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.96 E-value=5.5e-27 Score=213.95 Aligned_cols=245 Identities=27% Similarity=0.390 Sum_probs=194.4
Q ss_pred CCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceee
Q 017457 51 PLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIH 130 (371)
Q Consensus 51 ~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 130 (371)
++|.++|||++|+|+++|++++++++||+|+..
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------- 51 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------- 51 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEec-----------------------------------------------
Confidence 588999999999999999999999999999653
Q ss_pred cccCcccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCe
Q 017457 131 HFLNISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 210 (371)
Q Consensus 131 ~~~~~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~ 210 (371)
+.|++|+.++.+.++++|+++++.+++.+ +.+++||+++ ...++++++++||+|+|.+|++++++|+++|+++
T Consensus 52 -----~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 52 -----GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred -----CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 16899999999999999999999999888 7899999976 4788999999999988999999999999999943
Q ss_pred EEEEcCChhHHHHHHHhC-cceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 211 IIGVDINPEKFEIGKKFG-ITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 211 Vi~~~~~~~~~~~~~~lg-a~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
|+++++++++.+.++++| ++.+++..+ ..+.+ ++|++||+++........+++++++ |+++.+|..
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~ 192 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY 192 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence 999999999999999999 555554322 11233 8999999988766689999999998 999999874
Q ss_pred CCCCceecCHHHHhc-CceEEEeeccCCC---------chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcC
Q 017457 289 MHGSPISLNSIEILK-GRSVCGTYFGGLK---------PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEG 358 (371)
Q Consensus 289 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (371)
... . ......+.. ..++.+....... ..+.+++++++++++++.. .+.+.|+++++++|++.+.++
T Consensus 193 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~ 268 (277)
T cd08255 193 GLK-P-LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYRLLFED 268 (277)
T ss_pred CCC-c-cccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHHHHHcC
Confidence 332 1 111222332 4566666433211 1246888999999997553 356889999999999999877
Q ss_pred --ceeeEEE
Q 017457 359 --KSLRCII 365 (371)
Q Consensus 359 --~~~kvvv 365 (371)
...|+++
T Consensus 269 ~~~~~k~~~ 277 (277)
T cd08255 269 PPECLKVVL 277 (277)
T ss_pred CccceeeeC
Confidence 3347764
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=4.3e-25 Score=191.90 Aligned_cols=293 Identities=22% Similarity=0.229 Sum_probs=218.7
Q ss_pred EEec-CCCCCCeEEEEEeEeecccccccccccCCCCCCCCCCc-----cccccccEEEEEeCCCCCCcCCCCEEeeccCC
Q 017457 13 EIEV-EPPKAWEIRIKILCTSLCHSDVTFWKSSTDLPKLPLPV-----IFGHEAVGVVESVGEYVEEVKERDLVLPIFHR 86 (371)
Q Consensus 13 ~~~~-~~~~~~eVlVkv~~~~i~~~D~~~~~g~~~~~~~~~p~-----~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~ 86 (371)
++++ .++.+++||||.+|-+..|.-..-++...+.. .-.|+ +.| .++|+|++. .-+++++||.|....
T Consensus 28 ~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~-y~~~~~~G~pi~g-~GV~kVi~S--~~~~~~~GD~v~g~~-- 101 (343)
T KOG1196|consen 28 TVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD-YAPPYEPGKPIDG-FGVAKVIDS--GHPNYKKGDLVWGIV-- 101 (343)
T ss_pred eecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc-ccCcccCCcEecC-CceEEEEec--CCCCCCcCceEEEec--
Confidence 3443 46789999999999999765322222111110 01122 344 678999985 446799999995532
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecce--eEECC--CCCCcchhh
Q 017457 87 DCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITH--VVKIT--PHIPLGIAC 162 (371)
Q Consensus 87 ~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~--~~~~P--~~l~~~~aa 162 (371)
+|.||.+++... .+++| .++++--..
T Consensus 102 --------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl 131 (343)
T KOG1196|consen 102 --------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL 131 (343)
T ss_pred --------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhh
Confidence 699999997653 44444 344443333
Q ss_pred -ccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCC
Q 017457 163 -LLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCG 239 (371)
Q Consensus 163 -~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~ 239 (371)
.+..+.+|||...++....++|++|+|-|| |++|+++.|+||.+|+ +|++++.++||.+.++. +|.+..+||++
T Consensus 132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-- 208 (343)
T KOG1196|consen 132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-- 208 (343)
T ss_pred hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC--
Confidence 356689999999999999999999999987 9999999999999999 99999999999999876 79999999998
Q ss_pred CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECccCC----CC-ceecCHHHHhcCceEEEeeccC
Q 017457 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMH----GS-PISLNSIEILKGRSVCGTYFGG 314 (371)
Q Consensus 240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~----~~-~~~~~~~~~~~~~~~~g~~~~~ 314 (371)
+.+..+.+++..+.|+|+.||.+|+.. +...+..|+.. |+++.||..+. .+ .+.-....+.+++++.|+...+
T Consensus 209 e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d 286 (343)
T KOG1196|consen 209 ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSD 286 (343)
T ss_pred ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeec
Confidence 238888888877779999999999988 99999999997 99999996431 11 1111122234478888876555
Q ss_pred CCc--hhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEEEeC
Q 017457 315 LKP--RSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCIIWMD 368 (371)
Q Consensus 315 ~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv~~~ 368 (371)
+.+ .+.++.+..++++|+|+..+-+.. .|++.++||.-+.++... |.++.+.
T Consensus 287 ~~d~~~k~ld~l~~~ikegKI~y~edi~~--Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 287 YLDKYPKFLDFLLPYIKEGKITYVEDIAD--GLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred hhhhhHHHHHHHHHHHhcCceEEehhHHH--HHhccHHHHHHHhccCcccceEEEee
Confidence 542 244677889999999987654433 499999999999998776 8888765
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.89 E-value=1.3e-23 Score=163.93 Aligned_cols=108 Identities=34% Similarity=0.596 Sum_probs=95.4
Q ss_pred CCeEEEEEeEeecccccccccccC-CCCCCCCCCccccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCC
Q 017457 21 AWEIRIKILCTSLCHSDVTFWKSS-TDLPKLPLPVIFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKS 99 (371)
Q Consensus 21 ~~eVlVkv~~~~i~~~D~~~~~g~-~~~~~~~~p~~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~ 99 (371)
|+||||||++++||++|+++++|. .... .+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~--~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPP--KFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTS--SSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCC--CCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 689999999999999999999995 3333 8999999999999999999999999999999999989999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCccccccCCceeecccCcccccceeeeecceeEEC
Q 017457 100 NTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLNISSFTEYSVVDITHVVKI 152 (371)
Q Consensus 100 ~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~ 152 (371)
++|..... .|+..+| +|+||+.+++++++|+
T Consensus 79 ~~c~~~~~---~g~~~~G-------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEV---LGLGLDG-------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEE---TTTSSTC-------------------SSBSEEEEEGGGEEEE
T ss_pred ccCCCCCE---eEcCCCC-------------------cccCeEEEehHHEEEC
Confidence 99987665 6776766 9999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.75 E-value=4.4e-17 Score=131.26 Aligned_cols=128 Identities=30% Similarity=0.517 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHH
Q 017457 194 AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAF 272 (371)
Q Consensus 194 ~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~ 272 (371)
++|++++|+|+++|+ +|++++++++|++.++++|+++++++++ .++.+.+++++++ ++|+||||+|....++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999997 9999999999999999999999999988 7899999999998 9999999999777799999
Q ss_pred HHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHHHHHHHHHc
Q 017457 273 NSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIATLAQKYLD 330 (371)
Q Consensus 273 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~ 330 (371)
++++++ |+++.+|... ....+++...++. ++++.|+...+ .++++++++++++
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999998 9999999854 4667888888766 89999997555 5789999988764
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.46 E-value=1.8e-12 Score=122.46 Aligned_cols=175 Identities=15% Similarity=0.200 Sum_probs=136.0
Q ss_pred HHHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh
Q 017457 173 GAAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 173 ~~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~ 251 (371)
.++.+..+ ..+|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.|.+.++.+|++.+ + ..+.+
T Consensus 190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v---- 255 (413)
T cd00401 190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV---- 255 (413)
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH----
Confidence 33444333 4689999999999999999999999999 89999999999999999998533 1 11122
Q ss_pred CCCcCEEEECCCChHHHHHH-HHHhhcCCceEEEECccCCCCceecCHHHHhc-CceEEEeeccCCCchhhHH--HHHHH
Q 017457 252 DGGADYCFECIGLTSVMNDA-FNSSREGWGKTVILGVEMHGSPISLNSIEILK-GRSVCGTYFGGLKPRSDIA--TLAQK 327 (371)
Q Consensus 252 ~gg~d~vid~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~--~~~~~ 327 (371)
.++|+||+++|....++.. ++.++++ |.++.+|.. ..+++...+.. .+++.++..... ..+++ +.+.+
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L 327 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRIIL 327 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence 2689999999988877765 9999997 999999953 34677776665 788888753321 12345 79999
Q ss_pred HHcCCC-CCCCceeEE-----Eecc-cHHHHHHHHhcCcee--eEEEEeCc
Q 017457 328 YLDKEL-NLGEFITHE-----VSFH-DINKAFDLLLEGKSL--RCIIWMDK 369 (371)
Q Consensus 328 ~~~g~~-~~~~~~~~~-----~~~~-~~~~a~~~~~~~~~~--kvvv~~~~ 369 (371)
+++|++ ++...++|. ++|+ |+.+++..+.++... |+++.+++
T Consensus 328 La~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~~ 378 (413)
T cd00401 328 LAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPKK 378 (413)
T ss_pred hhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCHH
Confidence 999998 788888888 8999 999999999886653 78777654
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.28 E-value=7e-11 Score=114.53 Aligned_cols=155 Identities=18% Similarity=0.192 Sum_probs=112.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCC----------CccHHHHHHH
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCG----------DKTVSQVIKE 249 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~----------~~~~~~~i~~ 249 (371)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ ..++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 5689999999999999999999999999 89999999999999999999854 5543310 0123333333
Q ss_pred h-hC--CCcCEEEECCCCh-----HH-HHHHHHHhhcCCceEEEECccCCCC-ceecCHHHHh--cCceEEEeeccCCCc
Q 017457 250 M-TD--GGADYCFECIGLT-----SV-MNDAFNSSREGWGKTVILGVEMHGS-PISLNSIEIL--KGRSVCGTYFGGLKP 317 (371)
Q Consensus 250 ~-~~--gg~d~vid~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~--~~~~~~g~~~~~~~~ 317 (371)
. +. +++|+||+|++.+ .. .+++++.++++ |+++++|...++. ..+.+...++ +++++.|... +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 3 33 2799999999863 34 49999999998 9999999743321 2344334444 4788888752 22
Q ss_pred hhhHHHHHHHHHcCCCCCCCcee
Q 017457 318 RSDIATLAQKYLDKELNLGEFIT 340 (371)
Q Consensus 318 ~~~~~~~~~~~~~g~~~~~~~~~ 340 (371)
.+...++.+++.++.+.+.+.++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 23334588899988777665554
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.21 E-value=1.7e-11 Score=98.06 Aligned_cols=119 Identities=21% Similarity=0.353 Sum_probs=77.7
Q ss_pred hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC--ChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHH-hc
Q 017457 227 FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG--LTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEI-LK 303 (371)
Q Consensus 227 lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~ 303 (371)
||+++++|+++ +++ ...+++|+|||++| +...+..++++| ++ |+++.++. ....... ..
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999987 555 22349999999999 666447777888 97 99998873 1111111 11
Q ss_pred CceEEEeeccCCC----chhhHHHHHHHHHcCCCCCCCceeEEEecccHHHHHHHHhcCcee-eEEE
Q 017457 304 GRSVCGTYFGGLK----PRSDIATLAQKYLDKELNLGEFITHEVSFHDINKAFDLLLEGKSL-RCII 365 (371)
Q Consensus 304 ~~~~~g~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-kvvv 365 (371)
...+....+.... ..+.++++++++++|++.+. +.++|||+++++|++.+.+++.. |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 3333333323211 13459999999999976654 88899999999999999998876 9886
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.56 E-value=6.4e-07 Score=86.96 Aligned_cols=108 Identities=20% Similarity=0.212 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCC----------CCccHHHHHHHh
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATC----------GDKTVSQVIKEM 250 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~----------~~~~~~~~i~~~ 250 (371)
.++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+. ...++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 467899999999999999999999999 89999999999999999998763 332110 012344444444
Q ss_pred hC---CCcCEEEECC---CChH---HHHHHHHHhhcCCceEEEECccCCC
Q 017457 251 TD---GGADYCFECI---GLTS---VMNDAFNSSREGWGKTVILGVEMHG 291 (371)
Q Consensus 251 ~~---gg~d~vid~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 291 (371)
.. .++|++|+++ |.+. ..+..++.++++ +.+++++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 43 2799999999 5422 468889999998 999999875444
No 133
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.55 E-value=8.8e-07 Score=80.54 Aligned_cols=161 Identities=22% Similarity=0.290 Sum_probs=98.6
Q ss_pred HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHh--
Q 017457 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEM-- 250 (371)
Q Consensus 178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~-- 250 (371)
.+.+++|++||.+|+|. |..+.++++..|.. +|++++.+++.++.+++. +.+.+- ... .+ +.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~---~d----~~~l~~ 142 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRL---GE----IEALPV 142 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEE---cc----hhhCCC
Confidence 35688999999999987 88888888887753 799999999988888763 332221 111 12 1222
Q ss_pred hCCCcCEEEEC-C-----CChHHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhcCceEEEeeccCCCchhhHHHH
Q 017457 251 TDGGADYCFEC-I-----GLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTYFGGLKPRSDIATL 324 (371)
Q Consensus 251 ~~gg~d~vid~-~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 324 (371)
..+.||+|+.. + .....++.+.+.|+++ |+++..+..... .++ ..+.....+.+....... ..+++
T Consensus 143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~---~~~e~ 214 (272)
T PRK11873 143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG---ELP-EEIRNDAELYAGCVAGAL---QEEEY 214 (272)
T ss_pred CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC---CCC-HHHHHhHHHHhccccCCC---CHHHH
Confidence 23479999843 2 2234589999999998 999987653222 111 111222222222112221 23445
Q ss_pred HHHHHc-CCCCCCCceeEEEecccHHHHHHHH
Q 017457 325 AQKYLD-KELNLGEFITHEVSFHDINKAFDLL 355 (371)
Q Consensus 325 ~~~~~~-g~~~~~~~~~~~~~~~~~~~a~~~~ 355 (371)
.+++++ |...........++++++.++++.+
T Consensus 215 ~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 215 LAMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 555655 3333333344678899999999988
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.48 E-value=1.3e-08 Score=97.78 Aligned_cols=159 Identities=18% Similarity=0.207 Sum_probs=106.8
Q ss_pred cccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccC
Q 017457 55 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 134 (371)
Q Consensus 55 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 134 (371)
.-|.|.++.+.+|+++++. .|++-+.. ||+|++| ++.|...+. .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 4689999999999998765 67777777 9999999 555555553 4444443
Q ss_pred cccccceeeeecceeEE---C-CCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCe
Q 017457 135 ISSFTEYSVVDITHVVK---I-TPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASK 210 (371)
Q Consensus 135 ~g~~a~~~~v~~~~~~~---~-P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~ 210 (371)
.|++++.+++ .+.. + +..+|...+| ...+....+..++++|+|+|+|.+|.++++.++..|+.+
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A---------v~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~ 206 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVSISSAA---------VELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK 206 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcCHHHHH---------HHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence 8999988876 3332 2 2223322221 111223334567899999999999999999999999668
Q ss_pred EEEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457 211 IIGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 266 (371)
Q Consensus 211 Vi~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~ 266 (371)
|+++.++.++.+ .++++|.. .++. .+..+.+ . ++|+||+|++.+.
T Consensus 207 V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l----~-~aDvVi~aT~s~~ 252 (417)
T TIGR01035 207 ILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYL----A-EADIVISSTGAPH 252 (417)
T ss_pred EEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHH----h-hCCEEEECCCCCC
Confidence 999999988755 55667753 2221 1122222 1 6999999998755
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.28 E-value=1.9e-05 Score=72.53 Aligned_cols=96 Identities=17% Similarity=0.244 Sum_probs=76.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.+++|+|+|.|.+|+++++.++.+|+ +|++.++++++.++++.+|++.+ .. ..+.+... ++|+||+++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~---------~~l~~~l~-~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL---------SELAEEVG-KIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH---------HHHHHHhC-CCCEEEECC
Confidence 68999999999999999999999999 99999999988888888886532 11 11222222 699999999
Q ss_pred CChHHHHHHHHHhhcCCceEEEECccCCC
Q 017457 263 GLTSVMNDAFNSSREGWGKTVILGVEMHG 291 (371)
Q Consensus 263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 291 (371)
+........++.++++ +.+++++...++
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8765456778889997 999999875443
No 136
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.22 E-value=1.8e-05 Score=75.48 Aligned_cols=101 Identities=19% Similarity=0.258 Sum_probs=76.6
Q ss_pred HHHHHHHcCCC-CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHh
Q 017457 172 VGAAWKVAGVE-VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 172 ~~~l~~~~~~~-~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~ 250 (371)
|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +. ++.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal--- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA--- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH---
Confidence 44333332444 89999999999999999999999999 899999988887666666754 22 121111
Q ss_pred hCCCcCEEEECCCChHHHH-HHHHHhhcCCceEEEECcc
Q 017457 251 TDGGADYCFECIGLTSVMN-DAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 251 ~~gg~d~vid~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 288 (371)
.++|++++++|....+. ..+..++++ +.++..|..
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~ 301 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHF 301 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCC
Confidence 16899999999877665 688889997 888888864
No 137
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.14 E-value=3.5e-05 Score=73.11 Aligned_cols=92 Identities=21% Similarity=0.303 Sum_probs=73.6
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
...|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+ ..+.+ .+.|++|+
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal-----~~aDVVIt 256 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA-----KIGDIFIT 256 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH-----hcCCEEEE
Confidence 4689999999999999999999999999 899999888877777767763 321 11222 26799999
Q ss_pred CCCChHHHH-HHHHHhhcCCceEEEECcc
Q 017457 261 CIGLTSVMN-DAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 261 ~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 288 (371)
++|....++ ..+..++++ +.++..|..
T Consensus 257 aTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 257 ATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred CCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 999888666 488889997 999988863
No 138
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=98.05 E-value=2e-07 Score=90.00 Aligned_cols=160 Identities=20% Similarity=0.172 Sum_probs=95.8
Q ss_pred cccccccEEEEEeCCCCCCcCCCCEEeeccCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCceeecccC
Q 017457 55 IFGHEAVGVVESVGEYVEEVKERDLVLPIFHRDCGECRDCKSSKSNTCSKFGRGYRPNMPRDGTSRFRELKGDVIHHFLN 134 (371)
Q Consensus 55 ~~G~e~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 134 (371)
.-|+|.++.+.+|+++.+..-+|+ +.. ||+|+.. ++.|...+. .|...+
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk~a----~~~a~~~g~---~g~~l~------------------ 139 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVKDA----YALAQEAGT---VGTILN------------------ 139 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHHHH----HHHHHHcCC---chHHHH------------------
Confidence 469999999999999987644444 333 5555421 222222221 121122
Q ss_pred cccccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHc---CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeE
Q 017457 135 ISSFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVA---GVEVGSTVAIFGLGAVGLAVAEGARLNRASKI 211 (371)
Q Consensus 135 ~g~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~---~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~V 211 (371)
+.|++.+.++ +.+....+.. ..+.+.++.++.... .-.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 140 -~lf~~a~~~~--------k~v~~~t~i~-~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 140 -RLFQKAFSVA--------KRVRTETGIG-AGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred -HHHHHHHHHH--------hhHhhhcCCC-CCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 2555554443 3332222211 224444555443221 23678999999999999999999999998789
Q ss_pred EEEcCChhHHH-HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457 212 IGVDINPEKFE-IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 266 (371)
Q Consensus 212 i~~~~~~~~~~-~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~ 266 (371)
+++.++.++.+ .++.+|.+ +++. +.+.+.. .++|+||+|++.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~---------~~~~~~l-~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPL---------DELPEAL-AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeH---------HHHHHHh-ccCCEEEECCCCCC
Confidence 99999988755 56667753 3321 1122211 26899999998754
No 139
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.03 E-value=0.00012 Score=65.70 Aligned_cols=132 Identities=20% Similarity=0.264 Sum_probs=82.0
Q ss_pred cccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216 (371)
Q Consensus 137 ~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~ 216 (371)
+|.+|.. +...++.+++++++..+.- +.+..+ ...+. ..+.++++||-+|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h-~tt~~~-l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTH-PTTRLC-LEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCC-HHHHHH-HHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4555544 6677888988888775542 111111 11111 1256889999999987 888776555 67757999999
Q ss_pred ChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCC--CcCEEEECCCChH---HHHHHHHHhhcCCceEEEECc
Q 017457 217 NPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDG--GADYCFECIGLTS---VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 217 ~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~g--g~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~ 287 (371)
++...+.+++.-...-+. .. .. +..+ .||+|+....... .++.+.+.|+++ |.++..|.
T Consensus 151 s~~~l~~A~~n~~~~~~~-~~---~~-------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi 214 (250)
T PRK00517 151 DPQAVEAARENAELNGVE-LN---VY-------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGI 214 (250)
T ss_pred CHHHHHHHHHHHHHcCCC-ce---EE-------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEEC
Confidence 999888776532111010 00 00 1111 5899986554332 356788889998 99998765
No 140
>PLN02494 adenosylhomocysteinase
Probab=97.98 E-value=8e-05 Score=71.42 Aligned_cols=98 Identities=20% Similarity=0.284 Sum_probs=76.5
Q ss_pred HHHHHcC-CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhC
Q 017457 174 AAWKVAG-VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 174 ~l~~~~~-~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
++.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. + ...+.+.
T Consensus 243 ~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~---- 308 (477)
T PLN02494 243 GLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS---- 308 (477)
T ss_pred HHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh----
Confidence 3444433 3679999999999999999999999999 8999998888776776677642 2 1222221
Q ss_pred CCcCEEEECCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457 253 GGADYCFECIGLTSV-MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 gg~d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~ 287 (371)
.+|+++.++|.... ....++.|+++ +.++.+|.
T Consensus 309 -~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr 342 (477)
T PLN02494 309 -EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGH 342 (477)
T ss_pred -hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCC
Confidence 58999999998764 37899999998 99999987
No 141
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.98 E-value=2.4e-05 Score=72.43 Aligned_cols=109 Identities=17% Similarity=0.184 Sum_probs=77.9
Q ss_pred ceeEECCCCCCcchhhccccchhhhHHHHHHHcC---CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHH-H
Q 017457 147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKVAG---VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKF-E 222 (371)
Q Consensus 147 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~---~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~-~ 222 (371)
...+++|+.++.+.++... +...++.++..... -.++++|+|+|+|.+|.++++.++..|..+|+++.+++++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 3566778888888887765 56666665432221 24789999999999999999999988876899999998875 5
Q ss_pred HHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChHH
Q 017457 223 IGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTSV 267 (371)
Q Consensus 223 ~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~~ 267 (371)
.++++|+. +++. .++.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~-----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL-----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH-----HHHHHHH-----hcCCEEEECCCCCch
Confidence 66778873 3321 1122222 158999999998773
No 142
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.83 E-value=0.00023 Score=67.44 Aligned_cols=100 Identities=22% Similarity=0.220 Sum_probs=70.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++......... .+.+.+... .+|++|++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~------~~~l~~~l~-~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN------AYEIEDAVK-RADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC------HHHHHHHHc-cCCEEEEc
Confidence 45669999999999999999999999 89999999888877654 45432222111 122333222 68999999
Q ss_pred CC---C--hH-HHHHHHHHhhcCCceEEEECccCCC
Q 017457 262 IG---L--TS-VMNDAFNSSREGWGKTVILGVEMHG 291 (371)
Q Consensus 262 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~~ 291 (371)
++ . +. .....++.++++ +.+++++...++
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~GG 272 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQGG 272 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCCC
Confidence 73 2 21 236778889997 999999875443
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.82 E-value=0.00036 Score=63.68 Aligned_cols=94 Identities=16% Similarity=0.234 Sum_probs=71.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.|++++|+|.|.+|.+.+..++.+|+ +|++..+++++.+.+.++|...+ . + ..+.+... .+|+|++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~--------~-~~l~~~l~-~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P--------L-NKLEEKVA-EIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c--------H-HHHHHHhc-cCCEEEECC
Confidence 57899999999999999999999999 99999999888777776665322 1 1 11222222 689999999
Q ss_pred CChHHHHHHHHHhhcCCceEEEECccC
Q 017457 263 GLTSVMNDAFNSSREGWGKTVILGVEM 289 (371)
Q Consensus 263 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 289 (371)
+....-...++.++++ ..+++++...
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 8655335677788887 8899998643
No 144
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.75 E-value=0.00036 Score=67.22 Aligned_cols=92 Identities=21% Similarity=0.263 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+.. . ++.+.+ ..+|+|+.
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell-----~~ADIVI~ 315 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVV-----ETADIFVT 315 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHH-----hcCCEEEE
Confidence 4579999999999999999999999999 8999988877665555556532 1 222222 16899999
Q ss_pred CCCChHHH-HHHHHHhhcCCceEEEECcc
Q 017457 261 CIGLTSVM-NDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 261 ~~g~~~~~-~~~~~~l~~~~G~~v~~g~~ 288 (371)
++|....+ ...++.|+++ +.++.+|..
T Consensus 316 atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 316 ATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred CCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 99987755 4889999998 999999864
No 145
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.69 E-value=0.00021 Score=57.62 Aligned_cols=97 Identities=21% Similarity=0.217 Sum_probs=63.0
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT--DFINPATCGDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~ 257 (371)
--++++++|+|+|++|.+++..+...|+++|+++.|+.+|.+.+. .++.. .+++.++ +.+.+. .+|+
T Consensus 9 ~l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~Di 78 (135)
T PF01488_consen 9 DLKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADI 78 (135)
T ss_dssp TGTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESE
T ss_pred CcCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCe
Confidence 346899999999999999999999999988999999998877654 45322 2333332 221111 6999
Q ss_pred EEECCCChHH--HHHHHHHhhcCCceEEEECc
Q 017457 258 CFECIGLTSV--MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 258 vid~~g~~~~--~~~~~~~l~~~~G~~v~~g~ 287 (371)
+|+|++.+.. ....+......-+.+++++.
T Consensus 79 vI~aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 79 VINATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp EEE-SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred EEEecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 9999887641 12222222221036777764
No 146
>PRK08324 short chain dehydrogenase; Validated
Probab=97.66 E-value=0.00042 Score=71.32 Aligned_cols=137 Identities=20% Similarity=0.231 Sum_probs=85.3
Q ss_pred cccceeeeecceeEECCCCCCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 017457 137 SFTEYSVVDITHVVKITPHIPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD 215 (371)
Q Consensus 137 ~~a~~~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~ 215 (371)
++++|..+++..++.+ +..+++++...... .....+|+++||+|+ |++|.+.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4567777776666666 55555555421100 122346899999997 9999999999999999 899999
Q ss_pred CChhHHHHHHH-hCc--c-eE--EcCCCCCCccHHHHHHHhh--CCCcCEEEECCCC-----------------------
Q 017457 216 INPEKFEIGKK-FGI--T-DF--INPATCGDKTVSQVIKEMT--DGGADYCFECIGL----------------------- 264 (371)
Q Consensus 216 ~~~~~~~~~~~-lga--~-~v--~~~~~~~~~~~~~~i~~~~--~gg~d~vid~~g~----------------------- 264 (371)
++.++.+.+.+ ++. . .+ .|-.+ .....+.+.+.. .+++|++|++.|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887665433 432 1 11 23222 122222233322 2379999999982
Q ss_pred --hHHHHHHHHHhhc---CCceEEEECcc
Q 017457 265 --TSVMNDAFNSSRE---GWGKTVILGVE 288 (371)
Q Consensus 265 --~~~~~~~~~~l~~---~~G~~v~~g~~ 288 (371)
...++.+++.++. + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1123445666655 5 789998863
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.47 E-value=0.00049 Score=58.79 Aligned_cols=118 Identities=18% Similarity=0.199 Sum_probs=80.7
Q ss_pred CCcchhhccccchhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHhCcce
Q 017457 156 IPLGIACLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKFGITD 231 (371)
Q Consensus 156 l~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~lga~~ 231 (371)
++....-.++-+...|. +.....++++++||=+|+|. |..++-+|+..| +|+.+++.++ .++.++.+|...
T Consensus 47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 33333334444445443 45677899999999999987 999999999988 7999998887 444456688754
Q ss_pred EEcCCCCCCccHHHHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457 232 FINPATCGDKTVSQVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 232 v~~~~~~~~~~~~~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|.-... |- ..-+... .||.++-+.+-+..-..+++.|+++ |+++.--
T Consensus 122 V~v~~g----DG---~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~Pv 169 (209)
T COG2518 122 VTVRHG----DG---SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPV 169 (209)
T ss_pred eEEEEC----Cc---ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEE
Confidence 432222 11 1122333 7999987666666468899999998 9887663
No 148
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.46 E-value=0.00022 Score=71.79 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=59.0
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhHHHHHHHhCcceEEcCCCC
Q 017457 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN---------------------PEKFEIGKKFGITDFINPATC 238 (371)
Q Consensus 180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~---------------------~~~~~~~~~lga~~v~~~~~~ 238 (371)
...+|++|+|+|+|+.|+++++.++..|+ +|++++.. ..+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 79888742 346677888998876654220
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTS 266 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~ 266 (371)
.+... +.+ ..++|+||.++|...
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCC
Confidence 00111 111 126999999999754
No 149
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.43 E-value=0.0015 Score=59.86 Aligned_cols=96 Identities=20% Similarity=0.279 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc-eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT-DFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~-~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
..++++||-+|+|. |.+++.+++ .|+.+|++++.++...+.+++. +.. .+..... + ......++|
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 46789999999987 877777665 5766999999999887777652 221 1111111 1 111223489
Q ss_pred CEEEECCCCh---HHHHHHHHHhhcCCceEEEECc
Q 017457 256 DYCFECIGLT---SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 256 d~vid~~g~~---~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
|+|+...... ..+..+.+.|+++ |.++..|.
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi 260 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGI 260 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeC
Confidence 9998644332 2356778899998 99988775
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.41 E-value=0.0028 Score=56.04 Aligned_cols=104 Identities=22% Similarity=0.258 Sum_probs=66.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHh---CcceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF---GITDFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l---ga~~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
++++|||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +++ +..+.+..+-.+.....+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999998 9999999999999999 999999998877655 222 2222332211011222222222211 268
Q ss_pred CEEEECCCCh-----------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457 256 DYCFECIGLT-----------------------SVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 256 d~vid~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
|.++.+.+.. ..++..++.+..+ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999887642 1144556667776 889988864
No 151
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.34 E-value=0.0014 Score=57.20 Aligned_cols=79 Identities=20% Similarity=0.250 Sum_probs=59.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc----ceEEcCCCCCCccHHHHHHHhhCC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI----TDFINPATCGDKTVSQVIKEMTDG--G 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga----~~v~~~~~~~~~~~~~~i~~~~~g--g 254 (371)
+++.++|+|+ +++|.+.+......|+ +|+.+.+..++++.+. +++. ...+|-.+ .......+..+... .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 4588999998 9999999999999999 9999999999998865 4772 23344333 13444455555555 6
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+.+|..|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998885
No 152
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.34 E-value=0.0063 Score=55.57 Aligned_cols=110 Identities=9% Similarity=0.080 Sum_probs=75.0
Q ss_pred chhhhHHHHHHHcC---CCCCCeEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCC
Q 017457 167 GVSTGVGAAWKVAG---VEVGSTVAIFGL-GAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGD 240 (371)
Q Consensus 167 ~~~ta~~~l~~~~~---~~~g~~VLI~G~-g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~ 240 (371)
-+.|.|. +..... .-..+.|+|.+| +-+++..+.+++ ..+..+++++. |+.+.++.+.+|. +.|+.|++
T Consensus 117 Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S~~N~~Fve~lg~Yd~V~~Yd~--- 191 (314)
T PF11017_consen 117 LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-SARNVAFVESLGCYDEVLTYDD--- 191 (314)
T ss_pred HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-cCcchhhhhccCCceEEeehhh---
Confidence 5556664 333322 334467788877 778888777777 45554899988 5566678899996 78888766
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+..+....--+++|+.|+......+.+.+...--..+.+|.
T Consensus 192 ------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~ 232 (314)
T PF11017_consen 192 ------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGA 232 (314)
T ss_pred ------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEc
Confidence 33333335567889999998778888888775235666775
No 153
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.28 E-value=0.0042 Score=53.56 Aligned_cols=102 Identities=19% Similarity=0.341 Sum_probs=68.9
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----HhC-cceEEcCCCCCCccHHHHHHHh
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFG-ITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~lg-a~~v~~~~~~~~~~~~~~i~~~ 250 (371)
....+.++++||.+|+|. |.+++.+|+..+. .+|++++.+++..+.++ .+| .+.+.... .+..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFTI 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhhc
Confidence 456788999999999988 8899999887642 38999999998877654 355 23221111 1222222222
Q ss_pred hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEE
Q 017457 251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.+.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 109 -~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 -NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999975542 33477888899997 998753
No 154
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.22 E-value=0.005 Score=58.04 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=70.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC---c-ceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG---I-TDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg---a-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.+|||+|+|.+|+.+++.+.+.|..+|++++++.++.+.+.... . ...+|-.+ .+.+.++.. ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d------~~al~~li~-~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD------VDALVALIK-DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC------hHHHHHHHh-cCCEEEE
Confidence 57999999999999999988888449999999999999887653 2 23444333 223333333 5699999
Q ss_pred CCCChHHHHHHHHHhhcCCceEEEECccC
Q 017457 261 CIGLTSVMNDAFNSSREGWGKTVILGVEM 289 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 289 (371)
+.+....++.+-.|++.+ =.+++.+...
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 999888665555677775 6777776643
No 155
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.21 E-value=0.0048 Score=51.71 Aligned_cols=103 Identities=17% Similarity=0.303 Sum_probs=70.6
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHhhC
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
...++++|+.++=+|+|. |..++++|+..-..+||++++++++.+..+ ++|.+.+.--+. +-.+.+.++.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-
Confidence 346789999888889866 777888885544459999999999877764 488764322222 2233333221
Q ss_pred CCcCEEEECCCC--hHHHHHHHHHhhcCCceEEEECc
Q 017457 253 GGADYCFECIGL--TSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 gg~d~vid~~g~--~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
.+|.+|-.-|. ...++.+|..|+++ |++|.-..
T Consensus 102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai 136 (187)
T COG2242 102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI 136 (187)
T ss_pred -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence 68999854443 23588999999998 99887654
No 156
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.15 E-value=0.0027 Score=53.74 Aligned_cols=77 Identities=21% Similarity=0.226 Sum_probs=55.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc---ceEEcCCCCCCcc----HHHHHHHhhCCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI---TDFINPATCGDKT----VSQVIKEMTDGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga---~~v~~~~~~~~~~----~~~~i~~~~~gg 254 (371)
.|.+|||+|+ +++|++.++--..+|- +||++.+++++++.++..-. ..+.|-.+ .+ +++++.+-.+ .
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P-~ 78 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYP-N 78 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCC-c
Confidence 4789999976 8999998888888898 99999999999999877432 33444333 33 3333333222 6
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
.++++|+.|-
T Consensus 79 lNvliNNAGI 88 (245)
T COG3967 79 LNVLINNAGI 88 (245)
T ss_pred hheeeecccc
Confidence 7999998883
No 157
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.12 E-value=0.0038 Score=59.48 Aligned_cols=109 Identities=13% Similarity=0.148 Sum_probs=73.4
Q ss_pred chhhhHHHHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHH
Q 017457 167 GVSTGVGAAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQV 246 (371)
Q Consensus 167 ~~~ta~~~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~ 246 (371)
+-...+..+....++++|++||-+|+|. |.++..+++..|+ +|++++.+++..+.+++.....-++... .++
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~--- 222 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDY--- 222 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cch---
Confidence 3333444455667889999999999864 7778888988898 9999999999998887643211111111 122
Q ss_pred HHHhhCCCcCEEEEC-----CCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457 247 IKEMTDGGADYCFEC-----IGL---TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 247 i~~~~~gg~d~vid~-----~g~---~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.++ .+.+|.|+.. ++. ...++.+.+.|+|+ |.++...
T Consensus 223 -~~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 223 -RDL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred -hhc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 112 3479988743 333 23478888999998 9887754
No 158
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.09 E-value=0.0044 Score=55.41 Aligned_cols=82 Identities=20% Similarity=0.243 Sum_probs=57.2
Q ss_pred CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC----cc-eEEcCCCCCCccHHHHHH-HhhC
Q 017457 181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG----IT-DFINPATCGDKTVSQVIK-EMTD 252 (371)
Q Consensus 181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg----a~-~v~~~~~~~~~~~~~~i~-~~~~ 252 (371)
...++++||+|| +++|...+..+...|. +++.+.|+.+|++.+.+ +. .. .++.-+- .+.+-.+.+. ++..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~ 80 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKE 80 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHh
Confidence 356789999998 9999999999989999 99999999999888754 32 21 2332221 1133333333 3333
Q ss_pred C--CcCEEEECCCC
Q 017457 253 G--GADYCFECIGL 264 (371)
Q Consensus 253 g--g~d~vid~~g~ 264 (371)
. .+|+.+|+.|-
T Consensus 81 ~~~~IdvLVNNAG~ 94 (265)
T COG0300 81 RGGPIDVLVNNAGF 94 (265)
T ss_pred cCCcccEEEECCCc
Confidence 2 78999999884
No 159
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.04 E-value=0.0055 Score=51.86 Aligned_cols=91 Identities=25% Similarity=0.381 Sum_probs=63.8
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
--.|++|.|+|.|.+|...+++++..|+ +|++.+++....+.....+.. . .++.+.+. ..|+|+.
T Consensus 33 ~l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~-----~aDiv~~ 97 (178)
T PF02826_consen 33 ELRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLA-----QADIVSL 97 (178)
T ss_dssp -STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHH-----H-SEEEE
T ss_pred ccCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcc-----hhhhhhh
Confidence 4568999999999999999999999999 999999988766644445542 1 23333333 4799988
Q ss_pred CCCChH-----HHHHHHHHhhcCCceEEEECc
Q 017457 261 CIGLTS-----VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 261 ~~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+.+... .-...+..|+++ ..+|.++.
T Consensus 98 ~~plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 98 HLPLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp -SSSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred hhccccccceeeeeeeeeccccc-eEEEeccc
Confidence 776311 235778889987 88887764
No 160
>PRK05993 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0055 Score=55.70 Aligned_cols=78 Identities=14% Similarity=0.254 Sum_probs=55.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHH---hhCCCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKE---MTDGGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~---~~~gg~d~ 257 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ..+..+.+.+ ..++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 4678999998 9999999988888999 99999999888887766665433 23322 1222222222 23347899
Q ss_pred EEECCC
Q 017457 258 CFECIG 263 (371)
Q Consensus 258 vid~~g 263 (371)
++++.|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 161
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.95 E-value=0.0081 Score=55.69 Aligned_cols=102 Identities=24% Similarity=0.337 Sum_probs=70.3
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHH----HhCcceEEcCCCCCCccHHHHHHHh
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGK----KFGITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~----~lga~~v~~~~~~~~~~~~~~i~~~ 250 (371)
.....++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++ +.|.+.+.... .+..+....
T Consensus 73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~----gD~~~~~~~- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC----GDGYYGVPE- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe----CChhhcccc-
Confidence 3456788999999999974 9999999998764 26999999988665554 35655432211 122221111
Q ss_pred hCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 251 TDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 251 ~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.+.+|+|+.+.+-.......++.|+++ |+++..
T Consensus 147 -~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 -FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred -cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 126999998877666566788999998 987763
No 162
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.016 Score=51.05 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc---ceEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI---TDFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga---~~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ++.. -+.+..+-.+..++.+.+.+... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999999888888899 8999999887665443 3321 12222111011233333333322 378
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|++|++.+.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998763
No 163
>PRK12742 oxidoreductase; Provisional
Probab=96.94 E-value=0.026 Score=49.72 Aligned_cols=100 Identities=21% Similarity=0.293 Sum_probs=61.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~v 258 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~--~~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRK--SGALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHH--hCCCcEE
Confidence 4789999998 9999999999988999 7877654 44544443 44555432 23222 1122222222 1368999
Q ss_pred EECCCChH-------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457 259 FECIGLTS-------------------------VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 259 id~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+++.|... ....+.+.++.. |+++.++..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 133 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV 133 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence 99877421 013444556666 899988763
No 164
>PRK05693 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0051 Score=55.74 Aligned_cols=76 Identities=20% Similarity=0.309 Sum_probs=53.7
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEEEE
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYCFE 260 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~vid 260 (371)
+++||+|+ |++|...++.+...|+ +|++++++.++.+.+...+...+ .|..+ .+.+.+.+..... +++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 57999998 9999999999988999 99999998887777665554433 34332 1233333333322 37999999
Q ss_pred CCC
Q 017457 261 CIG 263 (371)
Q Consensus 261 ~~g 263 (371)
+.|
T Consensus 79 ~ag 81 (274)
T PRK05693 79 NAG 81 (274)
T ss_pred CCC
Confidence 887
No 165
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0055 Score=53.76 Aligned_cols=77 Identities=13% Similarity=0.169 Sum_probs=51.7
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE--cCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI--NPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~--~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
++++|+|+ |++|...+..+...|+ +|+++++++++.+.+++++...++ |-.+ .++..+.+..+..+++|+++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 57999998 9999998888888899 999999988777666554422222 2222 1223333333333479999987
Q ss_pred CCC
Q 017457 262 IGL 264 (371)
Q Consensus 262 ~g~ 264 (371)
.|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 753
No 166
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.90 E-value=0.021 Score=56.65 Aligned_cols=105 Identities=11% Similarity=0.112 Sum_probs=66.9
Q ss_pred HcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--------Cc-----ceEEcCCCCCCcc
Q 017457 178 VAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--------GI-----TDFINPATCGDKT 242 (371)
Q Consensus 178 ~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--------ga-----~~v~~~~~~~~~~ 242 (371)
..+.+.|++|||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ + |. ..++..+- .+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---tD 149 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---EK 149 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---CC
Confidence 455778999999998 9999999999988999 89999998887654422 1 21 11221111 12
Q ss_pred HHHHHHHhhCCCcCEEEECCCChH---------------HHHHHHHHhhcC-CceEEEECcc
Q 017457 243 VSQVIKEMTDGGADYCFECIGLTS---------------VMNDAFNSSREG-WGKTVILGVE 288 (371)
Q Consensus 243 ~~~~i~~~~~gg~d~vid~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~ 288 (371)
. +.+.+.. +++|+||++.|... ....+++.+... .++||.++..
T Consensus 150 ~-esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 150 P-DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred H-HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 2 2333333 37999999987431 123344444432 2689988764
No 167
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.87 E-value=0.01 Score=50.58 Aligned_cols=81 Identities=22% Similarity=0.236 Sum_probs=58.9
Q ss_pred CCCeEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCC-CCCccHHHHHHHhhCCCcCE
Q 017457 183 VGSTVAIFGL--GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPAT-CGDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~--g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~-~~~~~~~~~i~~~~~gg~d~ 257 (371)
..+.|||+|+ |++|.+.+.-....|+ .|+++.+.-+++..+. ++|.. .-+|-.+ .....+..++++.+.|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 4578999974 9999998888888999 9999999999988876 67742 2344322 11223455566667778999
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
.+|..|-
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9987774
No 168
>PRK06182 short chain dehydrogenase; Validated
Probab=96.87 E-value=0.0063 Score=55.12 Aligned_cols=79 Identities=14% Similarity=0.259 Sum_probs=54.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhh--CCCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMT--DGGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~--~gg~d~v 258 (371)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+...+...+ .|-.+ .+++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 4678999998 9999999998888999 99999999887766655454322 23222 123333333332 2379999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+++.|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 998873
No 169
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.87 E-value=0.024 Score=47.87 Aligned_cols=91 Identities=21% Similarity=0.294 Sum_probs=64.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC-
Q 017457 187 VAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL- 264 (371)
Q Consensus 187 VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~- 264 (371)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..+.+.+. .+- .+. +.+.+... ++|.||++.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~-~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQ-GDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEE-SCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccce-eee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998777 44444332 222 222 33444333 79999999984
Q ss_pred ---hHHHHHHHHHhhcCCc--eEEEECc
Q 017457 265 ---TSVMNDAFNSSREGWG--KTVILGV 287 (371)
Q Consensus 265 ---~~~~~~~~~~l~~~~G--~~v~~g~ 287 (371)
......+++.++.. | +++.++.
T Consensus 72 ~~~~~~~~~~~~a~~~~-~~~~~v~~s~ 98 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKA-GVKRVVYLSS 98 (183)
T ss_dssp TTHHHHHHHHHHHHHHT-TSSEEEEEEE
T ss_pred ccccccccccccccccc-ccccceeeec
Confidence 23366777777664 4 7777664
No 170
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.85 E-value=0.0042 Score=52.03 Aligned_cols=105 Identities=19% Similarity=0.139 Sum_probs=67.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEc-CCCC-C------------CccHHHHHH
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFIN-PATC-G------------DKTVSQVIK 248 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~-~~~~-~------------~~~~~~~i~ 248 (371)
+..+|+|+|+|.+|+.|+.+++.+|+ +|+..+...++.+..+..+...+.. .... . .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 34789999999999999999999999 9999999999888888877654422 1110 0 012222333
Q ss_pred HhhCCCcCEEEECC--CC---hH-HHHHHHHHhhcCCceEEEECccCC
Q 017457 249 EMTDGGADYCFECI--GL---TS-VMNDAFNSSREGWGKTVILGVEMH 290 (371)
Q Consensus 249 ~~~~gg~d~vid~~--g~---~~-~~~~~~~~l~~~~G~~v~~g~~~~ 290 (371)
+... .+|++|.+. .+ +. ..+..++.|+++ ..+++++...+
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D~g 143 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCDQG 143 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGGGT
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEecCC
Confidence 3222 578888532 11 11 246778889987 88999986443
No 171
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.018 Score=51.76 Aligned_cols=79 Identities=20% Similarity=0.272 Sum_probs=52.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
+++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+ ++++.. .++ |-.+ .++..+.+..... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999999888999 999999988765554 334432 122 3222 1233333333221 368
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998773
No 172
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.84 E-value=0.017 Score=49.27 Aligned_cols=101 Identities=18% Similarity=0.195 Sum_probs=62.2
Q ss_pred HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhCC-Cc
Q 017457 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTDG-GA 255 (371)
Q Consensus 178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~g-g~ 255 (371)
...+++|++||.+|+|.-+.+.....+..+..+|++++.++.+ ...++..+ .|..+ ....+.+.+..+. ++
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~~ 99 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDKV 99 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCCc
Confidence 3457899999999987744433333333343489999988754 11233322 13222 3334445554555 89
Q ss_pred CEEEE-CC----CC------------hHHHHHHHHHhhcCCceEEEEC
Q 017457 256 DYCFE-CI----GL------------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 256 d~vid-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|+|+. .. |. ...++.+.+.|+++ |+++...
T Consensus 100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 99994 32 21 23578889999998 9988754
No 173
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.81 E-value=0.0045 Score=47.27 Aligned_cols=91 Identities=20% Similarity=0.216 Sum_probs=59.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
+|++|||+|+|.+|..-++.+...|+ +|+++++.. +..+ +--... . ..+.+. . .++++|+-++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~~~----l-~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFEED----L-DGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-GGG----C-TTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHHHH----H-hhheEEEecC
Confidence 57899999999999999999999999 999998775 2222 211111 1 122111 1 1799999999
Q ss_pred CChHHHHHHHHHhhcCCceEEEECccCCC
Q 017457 263 GLTSVMNDAFNSSREGWGKTVILGVEMHG 291 (371)
Q Consensus 263 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 291 (371)
+++..-+.+.+..+.. |.++........
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~p~~ 96 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDDPEL 96 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-CCC
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCCcCC
Confidence 9988455566666666 888888764433
No 174
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.79 E-value=0.0076 Score=59.54 Aligned_cols=75 Identities=19% Similarity=0.220 Sum_probs=55.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
.+.++++|+|+|.|..|++++.+++..|+ +|++.+..+++.+.++++|+..+ .... ..+.+ ..+|+|+
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~-----~~~~l-----~~~D~VV 75 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD-----AVQQI-----ADYALVV 75 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc-----hHhHh-----hcCCEEE
Confidence 35678999999999999999999999999 99999987776666777787433 2211 11112 1579999
Q ss_pred ECCCChH
Q 017457 260 ECIGLTS 266 (371)
Q Consensus 260 d~~g~~~ 266 (371)
.+.|-+.
T Consensus 76 ~SpGi~~ 82 (488)
T PRK03369 76 TSPGFRP 82 (488)
T ss_pred ECCCCCC
Confidence 9888643
No 175
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.77 E-value=0.017 Score=52.47 Aligned_cols=128 Identities=20% Similarity=0.295 Sum_probs=76.0
Q ss_pred ceeEECCCCCCcchhhccccchhhhHHHHHHH-cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH
Q 017457 147 THVVKITPHIPLGIACLLSCGVSTGVGAAWKV-AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK 225 (371)
Q Consensus 147 ~~~~~~P~~l~~~~aa~~~~~~~ta~~~l~~~-~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~ 225 (371)
..++++.+++.+ .......|++. +... .-+++|++||=+|+|. |.+++..+| +|+.+|++++..+-..+.++
T Consensus 130 ~~~i~lDPGlAF----GTG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 130 ELNIELDPGLAF----GTGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred ceEEEEcccccc----CCCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHHHH
Confidence 455666555533 23344555554 3222 2367999999999866 676665444 67778999999887665554
Q ss_pred H----hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC-CCChH--HHHHHHHHhhcCCceEEEECcc
Q 017457 226 K----FGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC-IGLTS--VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 226 ~----lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~-~g~~~--~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+ -+..... ... .........++.+|+|+-. ..+.. ..+.+.+.++++ |++++.|..
T Consensus 203 eNa~~N~v~~~~-~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 203 ENARLNGVELLV-QAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred HHHHHcCCchhh-hcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 4 3333211 000 0011112223489999844 33332 356788899998 999999864
No 176
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0091 Score=53.42 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=53.1
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Cc-ceEEcCCCCCCccHHHHHHHhh--CC
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GI-TDFINPATCGDKTVSQVIKEMT--DG 253 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga-~~v~~~~~~~~~~~~~~i~~~~--~g 253 (371)
..++++||+|+ |++|...+..+...|+ +|+++.+++++.+.+.. + +. .+++..+-.+.+++.+.+.+.. .+
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 45789999998 9999999999988999 89999998887655433 1 21 1222221101123333333322 13
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|+++++.+.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 177
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.76 E-value=0.014 Score=48.70 Aligned_cols=96 Identities=15% Similarity=0.204 Sum_probs=64.2
Q ss_pred hccccchhhhHHHHHHHcCCCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 162 CLLSCGVSTGVGAAWKVAGVEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 162 a~~~~~~~ta~~~l~~~~~~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
...||...++...+.....--.+++|||+|+|. +|..++..++..|+ +|+++.++.+
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~--------------------- 79 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK--------------------- 79 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------
Confidence 445555454444333333446889999999986 59989999999999 8888876521
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
++.+.+. .+|+||.+++.+..+.. +.++++ -.+++++..
T Consensus 80 -~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 -NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred -hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1222222 58999999998763332 246665 788888864
No 178
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.74 E-value=0.021 Score=51.48 Aligned_cols=106 Identities=20% Similarity=0.270 Sum_probs=68.0
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-E--E--cCCCCCCccHHHHHHHh-
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--I--NPATCGDKTVSQVIKEM- 250 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~--~~~~~~~~~~~~~i~~~- 250 (371)
..|+.|+|+|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+... + + |-.+ .++..+.+.+.
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAI 86 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHH
Confidence 46899999998 8999987777777899 777777777777666 3344332 2 2 2221 12333333221
Q ss_pred -hCCCcCEEEECCCChH-------------------------HHHHHHHHhhcCC-ceEEEECccCC
Q 017457 251 -TDGGADYCFECIGLTS-------------------------VMNDAFNSSREGW-GKTVILGVEMH 290 (371)
Q Consensus 251 -~~gg~d~vid~~g~~~-------------------------~~~~~~~~l~~~~-G~~v~~g~~~~ 290 (371)
.-|++|+.+|..|-.. ..+.++..|+... |+|+..++..+
T Consensus 87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 1238999999887421 2456667776644 89999986543
No 179
>PRK04148 hypothetical protein; Provisional
Probab=96.74 E-value=0.01 Score=47.20 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=62.9
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
..++.+++++|.| .|...+..+..+|. .|++++.+++..+.+++.+...+.+.-- +.++ .+ .+++|++..
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~----y~~a~liys 83 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EI----YKNAKLIYS 83 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HH----HhcCCEEEE
Confidence 3456889999998 77644555557899 9999999999999999888765554221 1221 11 127999998
Q ss_pred CCCChHHHHHHHHHhhcCCceEEEE
Q 017457 261 CIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.-..+.....+++..+.-+..++..
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 8887774455555554431344443
No 180
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0092 Score=53.39 Aligned_cols=79 Identities=23% Similarity=0.358 Sum_probs=52.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
+|++|||+|+ |++|.+.++.+...|+ +|+++++++.+.+.. .+++...+ .|..+ .+...+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 5789999998 9999999999988999 899999887766544 33443222 23222 1222222222221 37899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9988763
No 181
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.024 Score=53.06 Aligned_cols=79 Identities=20% Similarity=0.140 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-F--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +.|.+. . .|..+ .++..+.+.....
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4689999998 9999999999988999 8999999887765432 345432 2 23222 1222222222221
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 378999998874
No 182
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.028 Score=49.96 Aligned_cols=101 Identities=14% Similarity=0.139 Sum_probs=60.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
+++++||+|+ |++|...+..+...|+ +|+++.++.+ +.+.+ +..+.. ..+ |..+ .++..+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 4689999998 9999999998888999 8888877643 33322 222322 122 3222 1222223333222
Q ss_pred -CCcCEEEECCCCh-------------------HHHHHHHHHhhcCCceEEEECc
Q 017457 253 -GGADYCFECIGLT-------------------SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 -gg~d~vid~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+++|+++.+.+.. ..++.+.+.+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689999877532 1234455555555 78888865
No 183
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.70 E-value=0.024 Score=44.31 Aligned_cols=101 Identities=19% Similarity=0.343 Sum_probs=66.5
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~ 250 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++ .+.. .++..+- ... ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~~- 84 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LED- 84 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Chh-
Confidence 345567788999999977 8888888987654499999999987777643 4432 2222111 110 111
Q ss_pred hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457 251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~g 286 (371)
....+|+|+...+. ...++.+.+.|+++ |.++.-.
T Consensus 85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~ 122 (124)
T TIGR02469 85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA 122 (124)
T ss_pred hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence 12379999965432 22478899999998 9987653
No 184
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.028 Score=49.41 Aligned_cols=79 Identities=19% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHHhCcceE-EcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITDF-INPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |.+|...++.+...|+ +|++++++.++.+. +...+...+ .|..+ .+++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999998888899 89999987765332 222233222 22221 1223333333222 27
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 8999988763
No 185
>PRK08017 oxidoreductase; Provisional
Probab=96.69 E-value=0.0066 Score=54.23 Aligned_cols=77 Identities=18% Similarity=0.291 Sum_probs=54.1
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccH---HHHHHHhhCCCcCEEE
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTV---SQVIKEMTDGGADYCF 259 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~---~~~i~~~~~gg~d~vi 259 (371)
+++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+++.++..+. |..+ .... .+.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999998 9999999999999999 899999999888877777765432 3222 1112 2222232334788888
Q ss_pred ECCCC
Q 017457 260 ECIGL 264 (371)
Q Consensus 260 d~~g~ 264 (371)
++.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 87763
No 186
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.033 Score=49.44 Aligned_cols=80 Identities=20% Similarity=0.147 Sum_probs=51.3
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
-+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+. +.+.. .++ |-.+ .++..+.+.+...
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 81 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAA 81 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999999998888999 8999988877655432 22322 222 3222 1222222222211
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+++|+++++.|.
T Consensus 82 ~~~id~vi~~ag~ 94 (250)
T PRK12939 82 LGGLDGLVNNAGI 94 (250)
T ss_pred cCCCCEEEECCCC
Confidence 379999999875
No 187
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.68 E-value=0.016 Score=51.23 Aligned_cols=77 Identities=17% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDF-INPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
++++++|+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+...+ .|..+ .+....+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 5689999998 9999999999999999 89999998877665543 344322 23222 2222222221 13789999
Q ss_pred ECCCC
Q 017457 260 ECIGL 264 (371)
Q Consensus 260 d~~g~ 264 (371)
++.|.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 188
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.68 E-value=0.0072 Score=46.52 Aligned_cols=92 Identities=26% Similarity=0.335 Sum_probs=61.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHHh----Cc-ceEEcCCCCCCccHHHHHHHhh-CCCc
Q 017457 183 VGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIKEMT-DGGA 255 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~l----ga-~~v~~~~~~~~~~~~~~i~~~~-~gg~ 255 (371)
|+++||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++. +. +.+- ... .++ . .... ...+
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~-~~~---~d~-~--~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRIT-FVQ---GDA-E--FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEE-EEE---SCC-H--GGTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeE-EEE---Ccc-c--cCcccCCCC
Confidence 688999999877 788888888 4777 999999999988877652 21 2221 111 222 1 1111 2279
Q ss_pred CEEEECC-CCh---------HHHHHHHHHhhcCCceEEE
Q 017457 256 DYCFECI-GLT---------SVMNDAFNSSREGWGKTVI 284 (371)
Q Consensus 256 d~vid~~-g~~---------~~~~~~~~~l~~~~G~~v~ 284 (371)
|+|+... ... ..++.+.+.|+|+ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999766 211 1368888999998 98875
No 189
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.67 E-value=0.013 Score=56.34 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
-..+++|||+|+|.+|.+++..+...|+.+++++.++.++.+.+ .+++...++. + +.+.+... .+|+||
T Consensus 178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~--------~-~~l~~~l~-~aDiVI 247 (414)
T PRK13940 178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY--------L-SELPQLIK-KADIII 247 (414)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec--------H-HHHHHHhc-cCCEEE
Confidence 35678999999999999999999999987899999998876554 4454222222 2 12222222 689999
Q ss_pred ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457 260 ECIGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+|++.+...=. .+.+....=.+++++.
T Consensus 248 ~aT~a~~~vi~-~~~~~~~~~~~iDLav 274 (414)
T PRK13940 248 AAVNVLEYIVT-CKYVGDKPRVFIDISI 274 (414)
T ss_pred ECcCCCCeeEC-HHHhCCCCeEEEEeCC
Confidence 99998762211 1122211024677775
No 190
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.67 E-value=0.033 Score=45.85 Aligned_cols=91 Identities=22% Similarity=0.323 Sum_probs=60.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
+-.|++++|.|=|-+|.-.++.++.+|+ +|++++.++-+.-.+..-|.. +. ...+ .. ...|+++.
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~----a~-~~adi~vt 84 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEE----AL-RDADIFVT 84 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHH----HT-TT-SEEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHH----HH-hhCCEEEE
Confidence 5689999999999999999999999999 999999999777666655653 22 1222 21 26899999
Q ss_pred CCCChHH-HHHHHHHhhcCCceEEEECc
Q 017457 261 CIGLTSV-MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 261 ~~g~~~~-~~~~~~~l~~~~G~~v~~g~ 287 (371)
++|.... -..-++.|+++ ..++..|.
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh 111 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAGH 111 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESSS
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccCc
Confidence 9998663 35778889886 55555554
No 191
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.011 Score=53.15 Aligned_cols=85 Identities=18% Similarity=0.172 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-c--eEEcCCCCCCccHHHHHHHhhC--C
Q 017457 180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-T--DFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~--~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
..-+++++||+|+ |++|...+..+...|+ +|+++.++.+..+.+.+... . .++..+-.+.....+.+.+... +
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3457899999998 9999999999999999 89999988776665544221 1 2222111011222222222211 3
Q ss_pred CcCEEEECCCCh
Q 017457 254 GADYCFECIGLT 265 (371)
Q Consensus 254 g~d~vid~~g~~ 265 (371)
++|+||++.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999988753
No 192
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0099 Score=55.60 Aligned_cols=80 Identities=19% Similarity=0.280 Sum_probs=53.2
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce-EE--cCCCCCCccHHHHHHHhh--
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD-FI--NPATCGDKTVSQVIKEMT-- 251 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~-v~--~~~~~~~~~~~~~i~~~~-- 251 (371)
.+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.|.+. ++ |-.+ .++..+.+.+..
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASF 81 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHh
Confidence 35789999998 9999999999999999 8999999988776442 345432 22 3222 122222222211
Q ss_pred CCCcCEEEECCCC
Q 017457 252 DGGADYCFECIGL 264 (371)
Q Consensus 252 ~gg~d~vid~~g~ 264 (371)
.+++|++|++.|.
T Consensus 82 ~g~iD~lVnnAG~ 94 (330)
T PRK06139 82 GGRIDVWVNNVGV 94 (330)
T ss_pred cCCCCEEEECCCc
Confidence 2479999999873
No 193
>PRK14967 putative methyltransferase; Provisional
Probab=96.58 E-value=0.1 Score=45.77 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=63.3
Q ss_pred HcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC
Q 017457 178 VAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 178 ~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
...++++++||-.|+|. |..++.+++. +..+|++++.+++..+.+++ .+.. .+++ .++.+. +..
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~---~~~ 99 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARA---VEF 99 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhh---ccC
Confidence 34577889999999987 8888888875 55589999999987775544 3432 2222 122221 122
Q ss_pred CCcCEEEECCCC---------------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457 253 GGADYCFECIGL---------------------------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 253 gg~d~vid~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+.+|+|+...+- ...+..+.+.|+++ |+++.+.
T Consensus 100 ~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 100 RPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 379999864220 01245677889997 9988653
No 194
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.57 E-value=0.03 Score=51.09 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc----ceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI----TDFINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga----~~v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
..+++|+|+|+|+.|.+++..+..+|+++|++++++.+|.+.+.+ ++. ..+...+ +..+.+ ..+|
T Consensus 125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~-----~~aD 194 (284)
T PRK12549 125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL-----AAAD 194 (284)
T ss_pred ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh-----CCCC
Confidence 456899999999999999999999999899999999888776533 321 1222111 111111 2689
Q ss_pred EEEECCCChH----HHHHHHHHhhcCCceEEEECc
Q 017457 257 YCFECIGLTS----VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 257 ~vid~~g~~~----~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+||+|++... ........+++. ..++++-.
T Consensus 195 iVInaTp~Gm~~~~~~~~~~~~l~~~-~~v~DivY 228 (284)
T PRK12549 195 GLVHATPTGMAKHPGLPLPAELLRPG-LWVADIVY 228 (284)
T ss_pred EEEECCcCCCCCCCCCCCCHHHcCCC-cEEEEeee
Confidence 9999965321 001112346664 55665544
No 195
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.57 E-value=0.014 Score=52.38 Aligned_cols=80 Identities=19% Similarity=0.234 Sum_probs=52.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
+++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ ++.. .++..+-.+..+..+.+.+... +.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5789999998 9999999988888999 89999998887766544 3321 2221111011223333333222 37899
Q ss_pred EEECCC
Q 017457 258 CFECIG 263 (371)
Q Consensus 258 vid~~g 263 (371)
++++.|
T Consensus 84 li~~ag 89 (263)
T PRK06200 84 FVGNAG 89 (263)
T ss_pred EEECCC
Confidence 999877
No 196
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.55 E-value=0.011 Score=53.35 Aligned_cols=97 Identities=18% Similarity=0.169 Sum_probs=69.7
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECC-
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECI- 262 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~- 262 (371)
.+|.|+|+|.+|.-++.+|.-+|+ +|++.+.+.+|+..+..+-..++- -+++ ..++.+.+. ++|++|.++
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIgaVL 240 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGAVL 240 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEEEE
Confidence 457788999999999999999999 999999999999988774333221 1221 123333332 689998753
Q ss_pred -CCh----HHHHHHHHHhhcCCceEEEECccCC
Q 017457 263 -GLT----SVMNDAFNSSREGWGKTVILGVEMH 290 (371)
Q Consensus 263 -g~~----~~~~~~~~~l~~~~G~~v~~g~~~~ 290 (371)
++. ...++.++.|+++ +.++++....+
T Consensus 241 IpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 241 IPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred ecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 221 2467889999998 99999987443
No 197
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.016 Score=52.48 Aligned_cols=78 Identities=19% Similarity=0.246 Sum_probs=51.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceE--EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDF--INPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v--~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. .++...+ .|-.+ .+++.+.+..... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 679999998 9999999988888899 8999998888766543 3441222 23222 1223222333222 37899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9998873
No 198
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.54 E-value=0.012 Score=50.91 Aligned_cols=92 Identities=12% Similarity=-0.010 Sum_probs=57.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
.|++|||+|+|.+|...+..+...|+ +|+++.+... ....+.+.+.-. +.... +... .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChh--hc--CCceEEEEc
Confidence 57899999999999998888888998 8888875432 222222222111 11111 1100 01 278999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEECc
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
++++. .+..+...... +.++....
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d 101 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVIT 101 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECC
Confidence 99988 66666665554 66666654
No 199
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.50 E-value=0.023 Score=49.20 Aligned_cols=93 Identities=16% Similarity=0.109 Sum_probs=61.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
.|++|||+|+|.+|...+..+...|+ +|+++++... ....+.+.|--..+. .+ +... .+ .++++|+-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~-----~~~~--dl--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RC-----FDAD--IL--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CC-----CCHH--Hh--CCcEEEEEC
Confidence 47899999999999999999999999 8999876543 333333334212222 11 1111 11 279999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEECc
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
++.+..-..+....+.. |..+....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence 99986344555556665 77776654
No 200
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.018 Score=51.50 Aligned_cols=79 Identities=19% Similarity=0.183 Sum_probs=51.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|.+.+..+...|+ +|++++++.++.+.+.+ .+.+ .. .|-.+ .+...+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 5789999998 9999999999988999 89999988877655432 2322 12 23222 1223333332221
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 378999998763
No 201
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.49 E-value=0.022 Score=49.41 Aligned_cols=100 Identities=16% Similarity=0.178 Sum_probs=65.8
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 247 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i 247 (371)
.....++++++||-+|+|. |..++.+++..+ ..+|++++.+++..+.+++ .+.. .++..+- .+.+
T Consensus 65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~~ 137 (205)
T PRK13944 65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRGL 137 (205)
T ss_pred HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccCC
Confidence 3456678899999999866 777778887764 2289999999886665543 4432 2332221 1111
Q ss_pred HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
. ..+.||+|+-+.......+.+.+.|+++ |+++..
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 0 1237999986655445467888999998 998764
No 202
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.05 Score=48.62 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
+++++||+|+ |++|...+..+...|+ +|+++++++++.+...+ .+.. ..+..+-.+.++..+.+.+... +++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4689999998 9999998888888899 78888888776544333 2322 1222111011223333333222 378
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999883
No 203
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.48 E-value=0.017 Score=51.97 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=52.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Ccc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
++++++|+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+. +.. ..+ |-.+ ..+..+.+.+... +.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999998 9999999988888999 899999888777666543 321 122 2221 1223333333322 378
Q ss_pred CEEEECCC
Q 017457 256 DYCFECIG 263 (371)
Q Consensus 256 d~vid~~g 263 (371)
|+++++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999876
No 204
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.019 Score=52.76 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ .+.+ .++..+-.+.++..+.+.... -+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999998 9999999998888899 99999998877655432 2322 222221101122223233221 137
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 205
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.47 E-value=0.032 Score=46.09 Aligned_cols=90 Identities=18% Similarity=0.137 Sum_probs=58.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
-.|++|||+|+|.+|..-++.+...|+ +|++++ ++..+.+.+++.-. +..+. +.+. .+ .++|+|+-+
T Consensus 11 l~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~-~~~~~-----~~~~--dl--~~a~lViaa 77 (157)
T PRK06719 11 LHNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYIT-WKQKT-----FSND--DI--KDAHLIYAA 77 (157)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcE-EEecc-----cChh--cC--CCceEEEEC
Confidence 357899999999999998888888899 888885 33334444454221 22222 1110 01 278999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEEC
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+++.. .+..+...... +.++...
T Consensus 78 T~d~e-~N~~i~~~a~~-~~~vn~~ 100 (157)
T PRK06719 78 TNQHA-VNMMVKQAAHD-FQWVNVV 100 (157)
T ss_pred CCCHH-HHHHHHHHHHH-CCcEEEC
Confidence 99888 77766666654 4444443
No 206
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.46 E-value=0.019 Score=51.70 Aligned_cols=78 Identities=13% Similarity=0.163 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+.. ++ .|..+ .....+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 5789999998 9999999998888999 99999998876654432 2322 22 23222 1222222222211
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+++|+++++.|
T Consensus 86 ~~id~vi~~Ag 96 (263)
T PRK07814 86 GRLDIVVNNVG 96 (263)
T ss_pred CCCCEEEECCC
Confidence 37899999877
No 207
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.45 E-value=0.017 Score=51.55 Aligned_cols=80 Identities=19% Similarity=0.173 Sum_probs=51.2
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
|+++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ .+.. .++..+-.+.+...+.+.+... +.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 578999998 9999999999988999 99999988876655432 2221 2232221111233333333221 378
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999998863
No 208
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.44 E-value=0.013 Score=53.14 Aligned_cols=46 Identities=28% Similarity=0.208 Sum_probs=40.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 226 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 226 (371)
..++++++|+|+|+.+.+++.-++..|+.+|+++.|+.+|.+.+.+
T Consensus 123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 3458999999999999999999999998799999999998777654
No 209
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42 E-value=0.042 Score=53.69 Aligned_cols=78 Identities=22% Similarity=0.371 Sum_probs=49.9
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHH-HHHhCcceE-EcCCCCCCccHHHHHHH-hh--CC
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEI-GKKFGITDF-INPATCGDKTVSQVIKE-MT--DG 253 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~-~~~lga~~v-~~~~~~~~~~~~~~i~~-~~--~g 253 (371)
.+++++||+|+ |++|...++.+...|+ +|+++++.. ++.+. ..+++...+ +|..+ .+-.+.+.+ .. .+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~---~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA---PDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC---HHHHHHHHHHHHHhCC
Confidence 35789999998 9999999999989999 888887643 23332 234554322 34332 222222222 22 22
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
++|++|++.|
T Consensus 284 ~id~vi~~AG 293 (450)
T PRK08261 284 GLDIVVHNAG 293 (450)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 210
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.42 E-value=0.015 Score=53.07 Aligned_cols=76 Identities=12% Similarity=0.003 Sum_probs=51.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
++++++|+|+|+.+.+++.-+..+|+++|+++.++.+|.+.+.+ ++.. .+.... ..+.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence 57899999999999999998999999899999999887766543 3321 111000 001111111 26899999
Q ss_pred CCCCh
Q 017457 261 CIGLT 265 (371)
Q Consensus 261 ~~g~~ 265 (371)
|++..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98854
No 211
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.42 E-value=0.012 Score=51.37 Aligned_cols=101 Identities=20% Similarity=0.240 Sum_probs=67.1
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 247 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i 247 (371)
+.....++++++||-+|+|. |..+..+++..+. .+|+.++.+++-.+.+++ .|... ++..+- ...+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~--~~~~---- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG--TLGY---- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc--ccCC----
Confidence 34556789999999999876 7777788887653 289999999887766544 44332 222221 0011
Q ss_pred HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
...+.||+|+-........+.+++.|+++ |+++..
T Consensus 141 --~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred --CcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 01237999975444444467889999998 998765
No 212
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.02 Score=52.59 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=53.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc--ce-E--EcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--TD-F--INPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~~-v--~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ ++++. .. . .|-.+ ..+..+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999999999999999 899999988876654 33442 11 1 23222 1222233333222 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|+++++.|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 213
>PRK09186 flagellin modification protein A; Provisional
Probab=96.40 E-value=0.053 Score=48.35 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh----Ccc--eE--EcCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF----GIT--DF--INPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l----ga~--~v--~~~~~~~~~~~~~~i~~~~~ 252 (371)
+++++||+|+ |++|...+..+...|+ +|+++.+++++.+.+. ++ +.. .+ .|-.+ ...+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999998888999 8999998887765432 22 221 11 23222 1223333333222
Q ss_pred --CCcCEEEECCC
Q 017457 253 --GGADYCFECIG 263 (371)
Q Consensus 253 --gg~d~vid~~g 263 (371)
+++|+++++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 26899998875
No 214
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.38 E-value=0.022 Score=50.57 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC--cc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG--IT-DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg--a~-~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.+.. +. .. .++..+-.+..++...+.+... +.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999998 9999999988888899 89999999877655432 22 11 1221111111233333332211 278
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|++|++.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 215
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.37 E-value=0.022 Score=51.59 Aligned_cols=80 Identities=15% Similarity=0.170 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ + ++|.+.++.+...|+ +|++++++++..+.+ +++|....+..+-.+.++..+.+.+... +
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 5789999998 4 899999988888999 898888765332222 2345332222111111223333333322 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 85 ~iD~lVnnAG 94 (271)
T PRK06505 85 KLDFVVHAIG 94 (271)
T ss_pred CCCEEEECCc
Confidence 7999999887
No 216
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.022 Score=50.89 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=51.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
+++++||+|+ |++|...++.+...|+ +|+.++++++..+...++.... .+..+-.+.+++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999998 9999998888888999 8999998877555444432211 222111111222222222221 27899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998874
No 217
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.022 Score=51.74 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=52.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFI--NPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~--~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.... ..+ |..+ .+...+.+..... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3678999998 9999999998888999 899999998877666553221 122 2222 1222222332222 268
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999998875
No 218
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.35 E-value=0.039 Score=46.98 Aligned_cols=96 Identities=17% Similarity=0.191 Sum_probs=61.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
++++.+||-+|+|. |..++.+++.. +. +|++++.+++..+.+++ .+.+.+ .... .+..+ +. . .+.+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~-~-~~~f 113 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FG-Q-EEKF 113 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CC-C-CCCc
Confidence 55689999999865 66666666654 45 99999999887766543 454321 1111 12211 11 1 2379
Q ss_pred CEEEEC-CCC-hHHHHHHHHHhhcCCceEEEEC
Q 017457 256 DYCFEC-IGL-TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 256 d~vid~-~g~-~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|+|+.. ... ...++.+.+.|+++ |+++.+-
T Consensus 114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 999953 222 24477889999998 9988773
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.027 Score=50.61 Aligned_cols=81 Identities=21% Similarity=0.327 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCcceE--E--cCCCCCCccHHHHHHH
Q 017457 181 VEVGSTVAIFGL-G-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGITDF--I--NPATCGDKTVSQVIKE 249 (371)
Q Consensus 181 ~~~g~~VLI~G~-g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga~~v--~--~~~~~~~~~~~~~i~~ 249 (371)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+...+ ++...+ + |..+ ..+..+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 456789999997 6 799999999999999 89999888776654432 343222 2 3222 1122222222
Q ss_pred hh--CCCcCEEEECCCC
Q 017457 250 MT--DGGADYCFECIGL 264 (371)
Q Consensus 250 ~~--~gg~d~vid~~g~ 264 (371)
.. .+.+|+++++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 21 1378999999884
No 220
>PRK06196 oxidoreductase; Provisional
Probab=96.34 E-value=0.025 Score=52.47 Aligned_cols=78 Identities=17% Similarity=0.184 Sum_probs=50.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI--NPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~--~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
.+++|||+|+ |++|.+.+..+...|+ +|++++++.++.+.+. ++..-.++ |-.+ ..+..+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 5789999998 9999999988888999 8999999887665432 22211222 2222 1222222333222 3799
Q ss_pred EEEECCC
Q 017457 257 YCFECIG 263 (371)
Q Consensus 257 ~vid~~g 263 (371)
+++++.|
T Consensus 102 ~li~nAg 108 (315)
T PRK06196 102 ILINNAG 108 (315)
T ss_pred EEEECCC
Confidence 9999887
No 221
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.027 Score=49.99 Aligned_cols=81 Identities=20% Similarity=0.257 Sum_probs=51.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce-EEcCCCCCCccHHHHHHHhh--CCCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD-FINPATCGDKTVSQVIKEMT--DGGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~-v~~~~~~~~~~~~~~i~~~~--~gg~d~ 257 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+..+....+.... .+++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4789999998 9999999999999999 899999887765544 3355431 22211101122222222222 137899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9998773
No 222
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.32 E-value=0.034 Score=50.39 Aligned_cols=94 Identities=18% Similarity=0.249 Sum_probs=65.8
Q ss_pred ccccchhhhHHHHHHHcC-CCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
.+||+...... +.+..+ --.|++|+|+|.|. +|...+.++...|+ +|+++.+..
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------- 192 (286)
T PRK14175 137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------- 192 (286)
T ss_pred CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------
Confidence 45665555544 333333 35799999999855 99999999999999 888887432
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
.++.+.++ .+|+||.++|.+..+.. +.++++ ..++++|..
T Consensus 193 ~~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 193 KDMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred hhHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 12222222 58999999998864444 457887 889999874
No 223
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.031 Score=50.39 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=65.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEE--cCCCCCCccHHHHHHHhh-C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFI--NPATCGDKTVSQVIKEMT-D 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~--~~~~~~~~~~~~~i~~~~-~ 252 (371)
+++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+.+ + +.+ ..+ |-.+ ..+..+.+.+.. -
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 5789999998 9999999999988999 89999998877655432 2 322 122 3222 122333333322 1
Q ss_pred CCcCEEEECCCChH-------------------------HHHHHHHHhhc-CCceEEEECcc
Q 017457 253 GGADYCFECIGLTS-------------------------VMNDAFNSSRE-GWGKTVILGVE 288 (371)
Q Consensus 253 gg~d~vid~~g~~~-------------------------~~~~~~~~l~~-~~G~~v~~g~~ 288 (371)
+++|+++++.|... ..+.+++.+.. ++|+++.++..
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~ 145 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSV 145 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCc
Confidence 37899999887410 13455566643 23789888763
No 224
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.32 E-value=0.0094 Score=51.69 Aligned_cols=100 Identities=19% Similarity=0.286 Sum_probs=65.6
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHH----HHhCcceE--EcCCCCCCccHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIG----KKFGITDF--INPATCGDKTVSQVI 247 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~----~~lga~~v--~~~~~~~~~~~~~~i 247 (371)
+.+...+++|++||-+|+|. |..++.+|+..|.. +|+.++..++-.+.+ ..++.+.+ +..+. .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg------~--- 133 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG------S--- 133 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G------G---
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch------h---
Confidence 45667799999999999876 88888888887742 689999888654444 44565432 22211 1
Q ss_pred HHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 248 KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 248 ~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.-+.. +.||.++-+.+-+..-...++.|+++ |+++.-
T Consensus 134 ~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 134 EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 11112 27999998777666567899999998 998874
No 225
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.024 Score=51.00 Aligned_cols=79 Identities=18% Similarity=0.190 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----h--Ccc-eE--EcCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DF--INPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----l--ga~-~v--~~~~~~~~~~~~~~i~~~~~ 252 (371)
.++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ . +.. .. .|-.+ .++..+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999999988999 89999998876654322 1 111 11 23222 1222222333222
Q ss_pred --CCcCEEEECCCC
Q 017457 253 --GGADYCFECIGL 264 (371)
Q Consensus 253 --gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 378999999873
No 226
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.31 E-value=0.03 Score=49.69 Aligned_cols=81 Identities=15% Similarity=0.227 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
.++++||+|+ |++|.+.+..+...|+ +|++++++.. ..+.+++.+.. .++..+-.+..++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999888888999 8999987652 22333444432 2222111111233333333322 3689
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+++++.|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998764
No 227
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.29 E-value=0.072 Score=46.89 Aligned_cols=92 Identities=23% Similarity=0.223 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhH--------HHHHHHhCcceEEcCCCCCCccHHHHH
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRAS--KIIGVDIN----PEK--------FEIGKKFGITDFINPATCGDKTVSQVI 247 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~--~Vi~~~~~----~~~--------~~~~~~lga~~v~~~~~~~~~~~~~~i 247 (371)
-++++++|+|+|+.|.+.+..+...|++ ++++++++ .++ .++++.++... . . .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---G---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---c---CCHHHHH
Confidence 5678999999999999999988889997 89999988 443 22333333211 0 0 1333333
Q ss_pred HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
. ++|++|++++....-...++.+.++ ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 5899999997433224666777775 5555544
No 228
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.28 E-value=0.021 Score=52.12 Aligned_cols=94 Identities=22% Similarity=0.378 Sum_probs=58.5
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-ceE-EcCCCCCCccHHHHHHHhhCCC
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-TDF-INPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~~v-~~~~~~~~~~~~~~i~~~~~gg 254 (371)
..+|++||=+|+|. |.+++..+| +|+++|++++.++...+.+++ -|. +.+ +.... +.. .+.
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~----~~~-------~~~ 225 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE----DLV-------EGK 225 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS----CTC-------CS-
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec----ccc-------ccc
Confidence 67889999998755 566555444 599899999998877666554 232 122 21111 111 148
Q ss_pred cCEEEECCCChH---HHHHHHHHhhcCCceEEEECcc
Q 017457 255 ADYCFECIGLTS---VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 255 ~d~vid~~g~~~---~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
||+|+-..-... .+..+.+.++++ |.+++.|..
T Consensus 226 ~dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl 261 (295)
T PF06325_consen 226 FDLVVANILADVLLELAPDIASLLKPG-GYLILSGIL 261 (295)
T ss_dssp EEEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEcccc
Confidence 999995544333 245566678897 999998874
No 229
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.28 E-value=0.031 Score=45.80 Aligned_cols=96 Identities=23% Similarity=0.156 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.++++++|+|+|.+|...++.+...|..+|++.+++.++.+.+ ++++... +.... .+..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchhhc-----cccCCEEEe
Confidence 4578999999999999998888888643899999988876654 4455421 00000 111111 137999999
Q ss_pred CCCChHH----HHHHHHHhhcCCceEEEECc
Q 017457 261 CIGLTSV----MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 261 ~~g~~~~----~~~~~~~l~~~~G~~v~~g~ 287 (371)
|++.... .......++++ ..+++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 9886541 11222446665 67777765
No 230
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.28 E-value=0.062 Score=47.87 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.. .+.. +++.-+-.+..+..+.+..... ++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999997 9999999998888899 89999988876554322 2322 1222111111222222222221 37
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|.+.+.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 8999988863
No 231
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.061 Score=48.72 Aligned_cols=80 Identities=14% Similarity=0.126 Sum_probs=50.8
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
+++|||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+.+.+.+.+..... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 568999998 9999999888888898 89999998877665544 2221 2222111011222222222221 378999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+++.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999874
No 232
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.27 E-value=0.091 Score=46.29 Aligned_cols=79 Identities=23% Similarity=0.294 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-E--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-F--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ +..+... + .|..+ ...+.+.+.+...
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAF 80 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 3578999998 9999999988888899 799999988765443 2234321 2 23222 1223333333221
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|.++++.|.
T Consensus 81 ~~id~vi~~ag~ 92 (246)
T PRK05653 81 GALDILVNNAGI 92 (246)
T ss_pred CCCCEEEECCCc
Confidence 268999998864
No 233
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.26 E-value=0.03 Score=50.00 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=51.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. +.+.+ .++ |-.+ ..+..+.+.+...
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4689999998 9999999988888999 8999998887765542 23322 122 2222 1222222232222
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 234
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.23 E-value=0.029 Score=51.10 Aligned_cols=96 Identities=17% Similarity=0.058 Sum_probs=62.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
..+++++|+|+|++|.+++..+...|+.+|+++.++.++.+.+.+ ++....+.. . .+..+.+ ..+|+|++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIn 191 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIIN 191 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEE
Confidence 457899999999999999999999996699999999888766543 332110111 0 0110111 26899999
Q ss_pred CCCChHH-----HHHHHHHhhcCCceEEEECc
Q 017457 261 CIGLTSV-----MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 261 ~~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 287 (371)
+++.... .......+++. ..++++-.
T Consensus 192 aTp~g~~~~~~~~~~~~~~l~~~-~~v~DivY 222 (278)
T PRK00258 192 ATSAGMSGELPLPPLPLSLLRPG-TIVYDMIY 222 (278)
T ss_pred CCcCCCCCCCCCCCCCHHHcCCC-CEEEEeec
Confidence 9885431 01233566776 77777754
No 235
>PRK06484 short chain dehydrogenase; Validated
Probab=96.22 E-value=0.068 Score=53.23 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=67.6
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-E--EcCCCCCCccHHHHHHHhhC--CC
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-F--INPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v--~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
..++++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.+ ++... . .|-.+ .++..+.+.+... +.
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~ 343 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGR 343 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCC
Confidence 46789999998 9999999998888999 99999998887776544 44332 1 23222 1223333333322 36
Q ss_pred cCEEEECCCChH--------------------------HHHHHHHHhhcCCceEEEECcc
Q 017457 255 ADYCFECIGLTS--------------------------VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 255 ~d~vid~~g~~~--------------------------~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+|++|++.|... ..+.++..+..+ |+++.++..
T Consensus 344 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 344 LDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 899999877310 134445566565 899988763
No 236
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.037 Score=49.58 Aligned_cols=83 Identities=22% Similarity=0.304 Sum_probs=50.3
Q ss_pred CCCCCeEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhH-HHH----HHHhCc-c-eEEcCCCCCCccHHHHHHHhh
Q 017457 181 VEVGSTVAIFGL-GAVGLAVAEGARLN-RASKIIGVDINPEK-FEI----GKKFGI-T-DFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 181 ~~~g~~VLI~G~-g~~G~~ai~la~~~-g~~~Vi~~~~~~~~-~~~----~~~lga-~-~v~~~~~~~~~~~~~~i~~~~ 251 (371)
+..+++|||+|+ |++|.+.++-+... |+ +|+++++++++ .+. ++..+. + +++..+-.+..+..+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 457789999998 99999988776666 58 89999888764 333 233332 1 233222111123333333332
Q ss_pred C-CCcCEEEECCCC
Q 017457 252 D-GGADYCFECIGL 264 (371)
Q Consensus 252 ~-gg~d~vid~~g~ 264 (371)
. ++.|+++++.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999877654
No 237
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.034 Score=50.08 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=51.1
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
.+++++||+|+ |++|...++.+...|+ +|+++++++++.+... +.+.. .++ |..+ ..+....+.+...
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADE 83 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999999998888999 8999998877654332 22322 122 3222 1223333333322
Q ss_pred -CCcCEEEECCC
Q 017457 253 -GGADYCFECIG 263 (371)
Q Consensus 253 -gg~d~vid~~g 263 (371)
+++|++|++.+
T Consensus 84 ~~~iD~vi~~ag 95 (264)
T PRK07576 84 FGPIDVLVSGAA 95 (264)
T ss_pred cCCCCEEEECCC
Confidence 36899998775
No 238
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=96.20 E-value=0.031 Score=50.32 Aligned_cols=131 Identities=19% Similarity=0.132 Sum_probs=86.9
Q ss_pred cCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC--------CCccHHHHHHHh
Q 017457 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC--------GDKTVSQVIKEM 250 (371)
Q Consensus 179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~--------~~~~~~~~i~~~ 250 (371)
+.-.++..+|+.|.|..|++++..++.+|+ .|...+..+.+.+..+.+|+..+--.++. -.++|...-.++
T Consensus 159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~ 237 (356)
T COG3288 159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL 237 (356)
T ss_pred cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence 344567789999999999999999999999 88888888888888888887532111111 123344443343
Q ss_pred hCC---CcCEEEECC--CCh----HHHHHHHHHhhcCCceEEEECccCCCCceecCHHHHhc--CceEEEee
Q 017457 251 TDG---GADYCFECI--GLT----SVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILK--GRSVCGTY 311 (371)
Q Consensus 251 ~~g---g~d~vid~~--g~~----~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~--~~~~~g~~ 311 (371)
... ++|+||-+. ++. .....++..|+|+ ..++++....++...-..+..... +++++|..
T Consensus 238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~ 308 (356)
T COG3288 238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT 308 (356)
T ss_pred HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence 332 899999653 332 2357889999998 999999875444321111122222 68888864
No 239
>PLN02366 spermidine synthase
Probab=96.20 E-value=0.071 Score=49.15 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc------c---eEEcCCCCCCccHHHHHHHh
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI------T---DFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga------~---~v~~~~~~~~~~~~~~i~~~ 250 (371)
..+.++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.+++. .. + .++. .+..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 35678999999866 55667788877666899999888767766662 11 1 1111 2333334433
Q ss_pred hCCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEEC
Q 017457 251 TDGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 251 ~~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.++.+|+|| |+.. ....++.+.++|+++ |.++.-+
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 334799998 4432 112377889999998 9987543
No 240
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=96.19 E-value=0.051 Score=49.54 Aligned_cols=45 Identities=22% Similarity=0.202 Sum_probs=38.2
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK 226 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~ 226 (371)
.++++++|+|+|+.+.+++.-+..+|+++++++.++.+|.+.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~ 169 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD 169 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence 457899999999999998888888999899999999888766543
No 241
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.042 Score=48.59 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=51.9
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
..++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ .+.. .++..+-.+.+...+.+..... +
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45678999997 9999999999988999 89999998876554432 2222 1222111011222233333222 2
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
+.|+++++.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 68999998874
No 242
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.18 E-value=0.032 Score=51.90 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=52.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----C-cc---eEEcCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----G-IT---DFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----g-a~---~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
.|+++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+.+ + + .. ...|-.+ +..+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 5899999998 9999998887777899 89999999988765432 1 1 11 1223221 11233444544444
Q ss_pred C-CcCEEEECCC
Q 017457 253 G-GADYCFECIG 263 (371)
Q Consensus 253 g-g~d~vid~~g 263 (371)
+ .+|+++++.|
T Consensus 130 ~~didilVnnAG 141 (320)
T PLN02780 130 GLDVGVLINNVG 141 (320)
T ss_pred CCCccEEEEecC
Confidence 4 5679998776
No 243
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.17 E-value=0.041 Score=49.82 Aligned_cols=70 Identities=20% Similarity=0.083 Sum_probs=50.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v 258 (371)
+...+++++|+|+|+.+.+++.-++.+|+.+|+++.++.++.+.+.+ ++.. +...+ ....+|++
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dlv 182 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADIL 182 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCEE
Confidence 44456799999999999999998999999789999999988776543 3311 10011 11258999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+||++-
T Consensus 183 INaTp~ 188 (272)
T PRK12550 183 VNVTPI 188 (272)
T ss_pred EECCcc
Confidence 999873
No 244
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.17 E-value=0.066 Score=46.26 Aligned_cols=35 Identities=29% Similarity=0.271 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
.+.+|+|+|+|++|...+..+..+|..+++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 45789999999999999999999999899999865
No 245
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.16 E-value=0.0062 Score=55.17 Aligned_cols=98 Identities=16% Similarity=0.259 Sum_probs=59.8
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQVI 247 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~i 247 (371)
+.+.+++++|++||-+|+|- |.++..+|+..|+ +|++++.+++..+.+++ .|.. .+.. .++
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~------~D~---- 121 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL------QDY---- 121 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE------S-G----
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------eec----
Confidence 45678899999999999874 6777788888899 99999999988877654 4531 1221 122
Q ss_pred HHhhCCCcCEEEE-----CCCC---hHHHHHHHHHhhcCCceEEEEC
Q 017457 248 KEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 248 ~~~~~gg~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+++.. .||.|+. .+|. +..++.+.+.|+|+ |+++.-.
T Consensus 122 ~~~~~-~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 122 RDLPG-KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp GG----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred cccCC-CCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 12222 7898875 3332 23478888999998 9886543
No 246
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.16 E-value=0.037 Score=49.40 Aligned_cols=79 Identities=22% Similarity=0.332 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~--~ 252 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.|.. ..+ |..+ .++..+.+.+.. .
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888899 8999998877654432 22322 122 3222 122322233222 1
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|++|++.|.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 247
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.16 E-value=0.12 Score=48.24 Aligned_cols=102 Identities=15% Similarity=0.086 Sum_probs=68.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHH-HHcCCCeEEEEcCChhHHHHHHH-h----CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGA-RLNRASKIIGVDINPEKFEIGKK-F----GITDFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la-~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
...++++|+|+|..|.+.+..+ ...++++|.+..+++++.+.+.+ + +.. +... .++.+.+ ...
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~-----~~~~~~~-----~~a 193 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVV-----NSADEAI-----EEA 193 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEe-----CCHHHHH-----hcC
Confidence 4567899999999998776544 46788899999999888765432 2 332 1111 1233333 268
Q ss_pred CEEEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCH
Q 017457 256 DYCFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNS 298 (371)
Q Consensus 256 d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 298 (371)
|+|+.|+++.. .-.. +.++++ -+++.+|.... ...+++.
T Consensus 194 DiVi~aT~s~~-p~i~-~~l~~G-~hV~~iGs~~p-~~~E~~~ 232 (325)
T PRK08618 194 DIIVTVTNAKT-PVFS-EKLKKG-VHINAVGSFMP-DMQELPS 232 (325)
T ss_pred CEEEEccCCCC-cchH-HhcCCC-cEEEecCCCCc-ccccCCH
Confidence 99999999776 3334 788886 88888887432 2344554
No 248
>PRK06128 oxidoreductase; Provisional
Probab=96.15 E-value=0.082 Score=48.63 Aligned_cols=101 Identities=18% Similarity=0.177 Sum_probs=59.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HH----HHHHHhCcce-EE--cCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KF----EIGKKFGITD-FI--NPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~----~~~~~lga~~-v~--~~~~~~~~~~~~~i~~~~~ 252 (371)
.++++||+|+ |++|.+.+..+...|+ +|+++.++.+ +. +.++..|... ++ |-.+ .....+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 5789999998 9999999888888999 8887765432 11 2233344322 22 2222 1222222222221
Q ss_pred --CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457 253 --GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 --gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+++|++|++.|.. ...+.+++.+..+ |+++.++.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS 192 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGS 192 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECC
Confidence 3799999988731 0233444555666 89888875
No 249
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.095 Score=47.36 Aligned_cols=77 Identities=16% Similarity=0.225 Sum_probs=48.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce----EEcCCCCCCccHHHHHHHhhC--C
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD----FINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~----v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ +..+... ..|-.+ .....+.+.+... +
T Consensus 1 k~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHG 77 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcC
Confidence 36899998 9999999998888999 899998887665443 2234321 133322 1122222222221 2
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 78 ~id~lv~~ag~ 88 (272)
T PRK07832 78 SMDVVMNIAGI 88 (272)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 250
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.037 Score=50.05 Aligned_cols=80 Identities=20% Similarity=0.298 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh---C--cc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---G--IT-DFINPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---g--a~-~v~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+... ++ + .. .++..+-.+..+..+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH 84 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999998 9999999999999999 8999998876654332 22 1 11 2221111011223333333322
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+++|++|++.|
T Consensus 85 ~~~d~li~~ag 95 (276)
T PRK05875 85 GRLHGVVHCAG 95 (276)
T ss_pred CCCCEEEECCC
Confidence 27899999886
No 251
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.04 Score=48.95 Aligned_cols=80 Identities=21% Similarity=0.263 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ..+.. ..+..+-.+.....+.+..... +.
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999988999 8999998877655432 23433 1222211001222222333222 36
Q ss_pred cCEEEECCC
Q 017457 255 ADYCFECIG 263 (371)
Q Consensus 255 ~d~vid~~g 263 (371)
+|.+|++.|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999877
No 252
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.036 Score=48.40 Aligned_cols=77 Identities=16% Similarity=0.219 Sum_probs=51.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce-EEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
+++||+|+ |++|...++.+...|+ +|+.+++++++.+.+...+... ..|-.+ ...+.+.+....++++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 47899997 9999998888877899 8999999888777776665432 223222 12222222223333799999877
Q ss_pred CC
Q 017457 263 GL 264 (371)
Q Consensus 263 g~ 264 (371)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 64
No 253
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.14 E-value=0.04 Score=49.19 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=50.0
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHHhhCCCc
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
++++||+|+ |++|...++.+...|+ +|+++.+++++.+.+.+ .+.. .+ .|.. +. +.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~-~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT-----DA-IDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC-----CH-HHHHHHhcCCC
Confidence 468999998 9999999999999999 89999988766554432 2322 12 2322 22 23444334489
Q ss_pred CEEEECCC
Q 017457 256 DYCFECIG 263 (371)
Q Consensus 256 d~vid~~g 263 (371)
|++|++.|
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999877
No 254
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.14 E-value=0.034 Score=49.91 Aligned_cols=80 Identities=14% Similarity=0.206 Sum_probs=48.5
Q ss_pred CCCeEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHH---HH-HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFE---IG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~g---~~G~~ai~la~~~g~~~Vi~~~~~~~~~~---~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+|+++||+|++ ++|.+.++.....|+ +|++++++++..+ .+ ++++...++.-+-.+.++..+.+..... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 57899999873 899999888888999 8988887754322 22 2234322332221111223333333222 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 7899998876
No 255
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.13 E-value=0.052 Score=51.93 Aligned_cols=91 Identities=23% Similarity=0.244 Sum_probs=59.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhHHHHHHH--hC--cc-eEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 187 VAIFGLGAVGLAVAEGARLNRAS-KIIGVDINPEKFEIGKK--FG--IT-DFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 187 VLI~G~g~~G~~ai~la~~~g~~-~Vi~~~~~~~~~~~~~~--lg--a~-~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
|+|+|+|.+|..++..+...+-. +|++.+++.++.+.+.+ .+ .. ..+|.. +. +.+.++.. +.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~-----~~-~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN-----DP-ESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT-----TH-HHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC-----CH-HHHHHHHh-cCCEEEE
Confidence 78999999999999998876643 89999999999777654 22 22 223332 22 23555544 5699999
Q ss_pred CCCChHHHHHHHHHhhcCCceEEEE
Q 017457 261 CIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
|+|.......+-.|+..+ -.+++.
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999776455666677776 677774
No 256
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.13 E-value=0.037 Score=49.60 Aligned_cols=81 Identities=16% Similarity=0.231 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFINPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~~~~~~~~~~~~~~i~~~~~-- 252 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+.+ + +.. .++..+-.+.++..+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999998 9999999998888999 89999988776554422 2 221 1221111011223333332221
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 85 g~id~li~~ag~ 96 (260)
T PRK07063 85 GPLDVLVNNAGI 96 (260)
T ss_pred CCCcEEEECCCc
Confidence 378999998873
No 257
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.11 E-value=0.04 Score=48.88 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+ .+.. .++..+-.+.....+.+.++.. ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999999888999 89999888776554432 2322 2232222111223333333322 26
Q ss_pred cCEEEECCC
Q 017457 255 ADYCFECIG 263 (371)
Q Consensus 255 ~d~vid~~g 263 (371)
+|++|.+.+
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999887
No 258
>PRK05717 oxidoreductase; Validated
Probab=96.11 E-value=0.04 Score=49.27 Aligned_cols=79 Identities=20% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
.|+++||+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++.. ..+ |-.+ ..+..+.+.+... +.+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 4789999997 9999999888888899 899998776655443 334432 122 2222 1222222333322 268
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|++|++.|.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999988773
No 259
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.041 Score=48.88 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--Ccc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GIT-DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--ga~-~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
+++++||+|+ |++|...++.+...|+ +|+.+.++.++.+...+ + +.. .++..+-.+.....+.+..... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999998 9999998888878899 89999988776544332 2 321 2222221111222222222221 378
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.+.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999998884
No 260
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.09 E-value=0.082 Score=49.05 Aligned_cols=93 Identities=10% Similarity=0.131 Sum_probs=61.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEE-cCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFI-NPATCGDKTVSQVIKEMTDGGADYCFECIG 263 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~-~~~~~~~~~~~~~i~~~~~gg~d~vid~~g 263 (371)
+|||+|+ |.+|...+..+...|. +|++++++.++...+...+++.+. |..+ . +.+.+... ++|+||++++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 6999998 9999999999888999 899999887665555555654332 2211 1 22333222 6899999865
Q ss_pred ChH------------HHHHHHHHhhcCCc--eEEEECc
Q 017457 264 LTS------------VMNDAFNSSREGWG--KTVILGV 287 (371)
Q Consensus 264 ~~~------------~~~~~~~~l~~~~G--~~v~~g~ 287 (371)
... ....+++.++.. | +++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss 110 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSI 110 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEecc
Confidence 321 123455666554 5 7888775
No 261
>PRK00811 spermidine synthase; Provisional
Probab=96.08 E-value=0.046 Score=49.91 Aligned_cols=96 Identities=19% Similarity=0.209 Sum_probs=63.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-C-----c--c---eEEcCCCCCCccHHHHHHHh
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-G-----I--T---DFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-g-----a--~---~v~~~~~~~~~~~~~~i~~~ 250 (371)
.++++||++|+|. |.++..+++..+..+|++++.+++-.+.+++. . . + .++. .+..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 4568999999866 66677777776766999999999887777662 1 1 1 1221 233333433
Q ss_pred hCCCcCEEEE-CCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457 251 TDGGADYCFE-CIGL---------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 251 ~~gg~d~vid-~~g~---------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
..+.+|+|+. +... ...++.+.+.|+++ |.++.-.
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 3448999984 3211 22357788999998 9988653
No 262
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.07 E-value=0.14 Score=48.87 Aligned_cols=95 Identities=18% Similarity=0.118 Sum_probs=66.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
-.++++||+|+|-+|.+++..+...|..+|+++-++.+|.+. ++++|+..+ ..+ +..+.+. .+|+||.
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l~-----el~~~l~-----~~DvVis 244 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-ALE-----ELLEALA-----EADVVIS 244 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cHH-----HHHHhhh-----hCCEEEE
Confidence 478899999999999999999999998899999999887664 567885422 211 1112221 6899999
Q ss_pred CCCChHH---HHHHHHHhhcCCc-eEEEECc
Q 017457 261 CIGLTSV---MNDAFNSSREGWG-KTVILGV 287 (371)
Q Consensus 261 ~~g~~~~---~~~~~~~l~~~~G-~~v~~g~ 287 (371)
+++.+.. .....+.++.... -+++++.
T Consensus 245 sTsa~~~ii~~~~ve~a~~~r~~~livDiav 275 (414)
T COG0373 245 STSAPHPIITREMVERALKIRKRLLIVDIAV 275 (414)
T ss_pred ecCCCccccCHHHHHHHHhcccCeEEEEecC
Confidence 9887652 2344455555423 4677765
No 263
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.07 E-value=0.084 Score=45.90 Aligned_cols=109 Identities=19% Similarity=0.220 Sum_probs=74.2
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~ 250 (371)
...++....++||=+|.+. |..++++|..+. -.+++.++.++++.+.+++ .|.+..+.-.. ..+..+.+.+.
T Consensus 52 ~~L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~ 128 (219)
T COG4122 52 RLLARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRL 128 (219)
T ss_pred HHHHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhc
Confidence 3445677888999888643 788888998876 3389999999998877765 56544221111 02455566553
Q ss_pred hCCCcCEEE-ECCC--ChHHHHHHHHHhhcCCceEEEECcc
Q 017457 251 TDGGADYCF-ECIG--LTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 251 ~~gg~d~vi-d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
..+.||+|| |+-- -+..++.+++.|+++ |.++.=...
T Consensus 129 ~~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl 168 (219)
T COG4122 129 LDGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVL 168 (219)
T ss_pred cCCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecc
Confidence 345899998 6544 345689999999997 887765543
No 264
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.05 E-value=0.041 Score=49.48 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=47.4
Q ss_pred CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcceE--EcCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITDF--INPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~v--~~~~~~~~~~~~~~i~~~~~- 252 (371)
.|+++||+|+ + ++|.+.++.+...|+ +|+.+++++...+.++ +.|.... .|-.+ .++..+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 5789999998 4 799998888778899 8888887642222222 2343332 23222 1233333333322
Q ss_pred -CCcCEEEECCC
Q 017457 253 -GGADYCFECIG 263 (371)
Q Consensus 253 -gg~d~vid~~g 263 (371)
+.+|+++++.|
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 37999998776
No 265
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.045 Score=48.89 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eE--EcCCCCCCccHHHHHHHhhC-
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DF--INPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v--~~~~~~~~~~~~~~i~~~~~- 252 (371)
-+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ + +.. +. .|..+ .+.+...+.+...
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 79 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALER 79 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999999998889999 89999988876554432 2 322 11 22221 1233333333222
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 80 ~g~~d~vi~~ag~ 92 (258)
T PRK07890 80 FGRVDALVNNAFR 92 (258)
T ss_pred cCCccEEEECCcc
Confidence 368999988763
No 266
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.04 E-value=0.048 Score=48.81 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+.. ..+..+-.+...+.+.+.++.. +.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999998 9999999998888999 89999998877655432 2322 1222111111223222232222 36
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|.++.+.|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 8999998774
No 267
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.046 Score=48.70 Aligned_cols=78 Identities=13% Similarity=0.160 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.++++.++.+.+.+ .+.. +.+ |..+ ..+..+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4678999998 9999999999988999 89999988776554432 2321 222 2222 1222222333222
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+.+|+++++.+
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 26899998887
No 268
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.055 Score=48.61 Aligned_cols=81 Identities=21% Similarity=0.272 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h--Cc-ceEEcCCCCCCccHHHHHHHhh-CCCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F--GI-TDFINPATCGDKTVSQVIKEMT-DGGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l--ga-~~v~~~~~~~~~~~~~~i~~~~-~gg~d 256 (371)
+++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.. + +. .+.+..+-.+.....+...... .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999997 9999999988888999 89999998877665533 2 21 1222211101112222222111 24789
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+++++.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99998774
No 269
>PRK00536 speE spermidine synthase; Provisional
Probab=96.01 E-value=0.03 Score=50.23 Aligned_cols=98 Identities=9% Similarity=-0.069 Sum_probs=64.9
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
...++|||+|+|- |-++=.++|.- . +|..++.+++=.+.+++ +.. ...++.-+ -.+...+.+...+.+|++|
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 4568999998765 55666888875 3 89999998887777777 321 01122111 1122223333334799987
Q ss_pred -ECCCChHHHHHHHHHhhcCCceEEEEC
Q 017457 260 -ECIGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 260 -d~~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|++-+..-++.+.++|+++ |.++.=+
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs 171 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVA 171 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECC
Confidence 8777777678999999998 9887643
No 270
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.05 Score=48.30 Aligned_cols=79 Identities=24% Similarity=0.287 Sum_probs=49.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h---Ccc-eE--EcCCCCCCccHHHHHHHhh--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F---GIT-DF--INPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l---ga~-~v--~~~~~~~~~~~~~~i~~~~--~ 252 (371)
.++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ + +.. .. .|-.+ .+...+.+.+.. .
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 5688999998 9999999988888899 89999988765544322 1 211 12 22222 122222222221 1
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+++|++|++.|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 268999998873
No 271
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.00 E-value=0.17 Score=43.37 Aligned_cols=103 Identities=17% Similarity=0.303 Sum_probs=62.7
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHH
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE 249 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~ 249 (371)
.....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. +..+.+..
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~~~ 105 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECLAQ 105 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHHhh
Confidence 3445677889988888754 5556666665432399999999988777654 45432 2221 22222222
Q ss_pred hhCCCcCEE-EECCCC-hHHHHHHHHHhhcCCceEEEECc
Q 017457 250 MTDGGADYC-FECIGL-TSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 250 ~~~gg~d~v-id~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+.. .+|.+ ++.... ...++.+.+.|+++ |+++....
T Consensus 106 ~~~-~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 106 LAP-APDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred CCC-CCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 222 34444 454322 34578899999998 99887753
No 272
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.00 E-value=0.048 Score=49.42 Aligned_cols=80 Identities=24% Similarity=0.238 Sum_probs=50.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+.+ .+.. ..+..+-.+..+....+.+... +.
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 89999988765544322 2322 1222111011223333333222 37
Q ss_pred cCEEEECCC
Q 017457 255 ADYCFECIG 263 (371)
Q Consensus 255 ~d~vid~~g 263 (371)
+|+++++.|
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 899999877
No 273
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.99 E-value=0.068 Score=48.97 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
.++++++|+|+|++|.+++..+...|+++|+++.++.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578999999999999988888889996799999885
No 274
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.97 E-value=0.028 Score=49.08 Aligned_cols=101 Identities=18% Similarity=0.202 Sum_probs=65.0
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVI 247 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i 247 (371)
+.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ .|.+. ++..+ ..+..
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d------~~~~~ 141 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD------GTQGW 141 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC------cccCC
Confidence 34456789999999999866 6677778877653 269999999887666543 45432 22211 11100
Q ss_pred HHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 248 KEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 248 ~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
...+.||+|+-..........+.+.|+++ |+++..
T Consensus 142 --~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 --EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 01127999885444444467888999998 998764
No 275
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.048 Score=50.57 Aligned_cols=41 Identities=24% Similarity=0.231 Sum_probs=34.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 224 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 224 (371)
.+++++|+|+ +++|.+.+..+...|+ +|++++++.++.+.+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~ 54 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAA 54 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4789999998 9999999888888999 999999988765543
No 276
>PRK06194 hypothetical protein; Provisional
Probab=95.97 E-value=0.047 Score=49.71 Aligned_cols=81 Identities=17% Similarity=0.239 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-Hh---Ccc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KF---GIT-DFINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~l---ga~-~v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+++++||+|+ |++|...+..+...|+ +|++++++.++.+... ++ +.. .++..+-.+.+++.+.+.... .++
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999998 9999999988888999 8999998876654432 22 332 122222101122222222221 136
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 277
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.96 E-value=0.072 Score=49.26 Aligned_cols=92 Identities=21% Similarity=0.382 Sum_probs=61.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
..+|.|+|.|.+|.+.+..++..|. .+|++.++++++.+.+++.|...... .+..+.+ ..+|+||.|+
T Consensus 6 ~~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiav 74 (307)
T PRK07502 6 FDRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCV 74 (307)
T ss_pred CcEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECC
Confidence 3679999999999998888887774 37999999999888888877531111 1221111 2689999999
Q ss_pred CChHH---HHHHHHHhhcCCceEEEECc
Q 017457 263 GLTSV---MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 263 g~~~~---~~~~~~~l~~~~G~~v~~g~ 287 (371)
+.... +..+...++++ ..++++|.
T Consensus 75 p~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred CHHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 87542 23333445565 66666654
No 278
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.96 E-value=0.033 Score=47.90 Aligned_cols=99 Identities=15% Similarity=0.235 Sum_probs=61.7
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhhC
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
......++.+||-+|+|. |..+..+|+. |. +|++++.+++..+.+++. +...+ +... .++.+ . .+ .
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~~~-~-~~-~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDLNN-L-TF-D 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cChhh-C-Cc-C
Confidence 334456778999999876 7777788874 77 999999999877766542 22211 1111 12111 0 11 2
Q ss_pred CCcCEEEECCC----C----hHHHHHHHHHhhcCCceEEEEC
Q 017457 253 GGADYCFECIG----L----TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 253 gg~d~vid~~g----~----~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 37999986533 1 23467888889998 9865543
No 279
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=95.93 E-value=0.05 Score=48.77 Aligned_cols=78 Identities=21% Similarity=0.258 Sum_probs=49.1
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
++||+|+ +++|.+.++.....|+ +|+.+++++++.+.+.+ .+..+.+..+-.+.++..+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899998 9999998888888899 89999988876554322 23222222221111223333333222 378999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998773
No 280
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.93 E-value=0.052 Score=49.30 Aligned_cols=102 Identities=12% Similarity=0.214 Sum_probs=64.1
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HHhCcceEE--cCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~lga~~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
.++++||+|+ +++|.+.++.+...|+ +|+.++++++ +.+.+ ++++....+ |-.+ .+...+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999986 4899999888888999 8998888753 33322 334433222 3222 1223333333322
Q ss_pred -CCcCEEEECCCCh--------------H---------------HHHHHHHHhhcCCceEEEECcc
Q 017457 253 -GGADYCFECIGLT--------------S---------------VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 253 -gg~d~vid~~g~~--------------~---------------~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+.+|+++++.|.. . ..+.+++.+..+ |+++.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 3789999988731 0 235566677776 899888753
No 281
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.92 E-value=0.053 Score=48.77 Aligned_cols=81 Identities=19% Similarity=0.258 Sum_probs=48.1
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+.+...+.+++ .|....+..+-.+.++..+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5789999984 5899998888888999 88887665433333332 23222222111112233333333322 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 79999998763
No 282
>PRK06197 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.054 Score=49.94 Aligned_cols=80 Identities=14% Similarity=0.152 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHh-----Ccc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKF-----GIT-DFINPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~l-----ga~-~v~~~~~~~~~~~~~~i~~~~~-- 252 (371)
.+++|||+|+ |++|...+..+...|+ +|+++.++.++.+.+ +++ +.. .++..+-.+.++..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 5789999998 9999999888888899 899999887765432 111 111 1222111011222222333322
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+++|++|++.|
T Consensus 94 ~~iD~li~nAg 104 (306)
T PRK06197 94 PRIDLLINNAG 104 (306)
T ss_pred CCCCEEEECCc
Confidence 26899999887
No 283
>PRK08267 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.064 Score=48.05 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=51.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC-cc-e--EEcCCCCCCccHHHHHHHhh---CCCc
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-IT-D--FINPATCGDKTVSQVIKEMT---DGGA 255 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg-a~-~--v~~~~~~~~~~~~~~i~~~~---~gg~ 255 (371)
+++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ ++ .. . ..|-.+ ..+..+.+.... .+.+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 57999998 9999999998888999 89999998887766543 22 11 1 223322 122333333221 3478
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998874
No 284
>PRK09242 tropinone reductase; Provisional
Probab=95.91 E-value=0.058 Score=48.23 Aligned_cols=79 Identities=16% Similarity=0.163 Sum_probs=51.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h-----Ccc-eEE--cCCCCCCccHHHHHHHhh-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F-----GIT-DFI--NPATCGDKTVSQVIKEMT- 251 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l-----ga~-~v~--~~~~~~~~~~~~~i~~~~- 251 (371)
.++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ + +.+ ..+ |-.+ ..+..+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999998 9999999999988999 89999988877654432 1 222 122 2222 122222222222
Q ss_pred -CCCcCEEEECCCC
Q 017457 252 -DGGADYCFECIGL 264 (371)
Q Consensus 252 -~gg~d~vid~~g~ 264 (371)
-+++|+++++.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 1378999999874
No 285
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.90 E-value=0.036 Score=48.96 Aligned_cols=81 Identities=23% Similarity=0.256 Sum_probs=51.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc-c---eEEcCCCCCCcc---HHHHHHHh
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI-T---DFINPATCGDKT---VSQVIKEM 250 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga-~---~v~~~~~~~~~~---~~~~i~~~ 250 (371)
++++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ .+. + .-.|..+.+..+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4689999998 9999999988888999 89999998876654422 121 1 112211100012 22233333
Q ss_pred hCCCcCEEEECCCC
Q 017457 251 TDGGADYCFECIGL 264 (371)
Q Consensus 251 ~~gg~d~vid~~g~ 264 (371)
..+.+|+++++.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999988873
No 286
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.90 E-value=0.018 Score=56.32 Aligned_cols=92 Identities=14% Similarity=0.114 Sum_probs=62.5
Q ss_pred HcCCCCCCeEE----EEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhh
Q 017457 178 VAGVEVGSTVA----IFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 178 ~~~~~~g~~VL----I~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~ 251 (371)
..++++|+.+| |+|+ |++|.+++|+++..|+ .|+.+...+.+....+..+.+ .++|... ..+.+.+..+.
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~~ 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKALY 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHHH
Confidence 45678888888 8876 9999999999999999 899887666544333333443 4555544 33444443322
Q ss_pred CCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 252 DGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 252 ~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
..++..++.|.++ |+++.++..
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEccc
Confidence 2256677788887 888888763
No 287
>PRK08643 acetoin reductase; Validated
Probab=95.89 E-value=0.055 Score=48.29 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=49.9
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce-EE--cCCCCCCccHHHHHHHhhC--C
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD-FI--NPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~-v~--~~~~~~~~~~~~~i~~~~~--g 253 (371)
++++||+|+ |++|...++.+...|+ +|++++++.++.+.+.. .+... .+ |-.+ .+...+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 578999998 9999999998888999 89999988776554432 23221 22 2222 1222222332221 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998864
No 288
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.055 Score=48.20 Aligned_cols=81 Identities=22% Similarity=0.283 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+.. ..+..+-.+..+..+.+.... -+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4789999998 9999999888888899 899999987765433 223322 222111101122222222221 137
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998773
No 289
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.89 E-value=0.056 Score=48.45 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=50.1
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ..+.. .++..+-.+...+.+.+.+... +++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 79 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGI 79 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 367999998 9999999999889999 9999999876654432 23332 1221111011223333333322 268
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.+.
T Consensus 80 d~vi~~ag~ 88 (263)
T PRK06181 80 DILVNNAGI 88 (263)
T ss_pred CEEEECCCc
Confidence 999998763
No 290
>PRK07985 oxidoreductase; Provisional
Probab=95.89 E-value=0.14 Score=47.05 Aligned_cols=103 Identities=16% Similarity=0.126 Sum_probs=61.4
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP--EKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~ 251 (371)
-+++++||+|+ |++|.+.++.+...|+ +|+++.++. ++.+.+. +.+.. .++ |-.+ .+...+.+.+..
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~ 123 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAH 123 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHH
Confidence 35789999998 9999999998888999 888876432 2333332 23322 122 2222 122333333332
Q ss_pred C--CCcCEEEECCCCh--------------------------HHHHHHHHHhhcCCceEEEECcc
Q 017457 252 D--GGADYCFECIGLT--------------------------SVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 252 ~--gg~d~vid~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
. +++|+++++.|.. ..++.+++.+..+ |+++.++..
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 2 3789999887631 0234455556666 899888753
No 291
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.87 E-value=0.067 Score=47.70 Aligned_cols=81 Identities=26% Similarity=0.339 Sum_probs=51.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-H---hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-K---FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~---lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+. + .+.. ..+..+-.+.....+.+..... +.
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 5789999998 9999999988888999 9999998877654432 2 2322 1222211111222222222221 36
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 292
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.86 E-value=0.083 Score=46.77 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=68.0
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE 249 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 249 (371)
+....+..++++||=+|.|. |..++.++++++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.+
T Consensus 60 L~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~ 135 (234)
T PLN02781 60 LSMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQ 135 (234)
T ss_pred HHHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHH
Confidence 34456677889999998743 666667777653 3499999999988777654 45432122122 344444544
Q ss_pred hh----CCCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEEEC
Q 017457 250 MT----DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 250 ~~----~gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+. .+.||+|| |+--. ...+..+++.++++ |.++.-.
T Consensus 136 l~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn 178 (234)
T PLN02781 136 LLNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN 178 (234)
T ss_pred HHhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence 42 23799998 44221 33477889999997 8876543
No 293
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.84 E-value=0.063 Score=48.66 Aligned_cols=82 Identities=16% Similarity=0.246 Sum_probs=49.1
Q ss_pred CCCCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---HHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhC-
Q 017457 181 VEVGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINPE---KFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 181 ~~~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~~---~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~- 252 (371)
+-.++++||+|+ +++|.+.+..+...|+ +|+.+.+++. +.+.+ ++++....+..+-.+.++..+.+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence 345789999986 5899998888888999 8888876642 33332 2345322222211111223333333322
Q ss_pred -CCcCEEEECCC
Q 017457 253 -GGADYCFECIG 263 (371)
Q Consensus 253 -gg~d~vid~~g 263 (371)
+.+|+++++.|
T Consensus 86 ~g~iD~lv~nAG 97 (272)
T PRK08159 86 WGKLDFVVHAIG 97 (272)
T ss_pred cCCCcEEEECCc
Confidence 37899998876
No 294
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.83 E-value=0.055 Score=48.79 Aligned_cols=102 Identities=16% Similarity=0.284 Sum_probs=71.6
Q ss_pred HHHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc---eEEcCCCCCCccHHHH
Q 017457 174 AAWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT---DFINPATCGDKTVSQV 246 (371)
Q Consensus 174 ~l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~---~v~~~~~~~~~~~~~~ 246 (371)
.+.+..++++|++||=+|+|- |.+++.+|+..|+ +|++++-|++..+.+++ .|.. .+.- .+
T Consensus 63 ~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l------~d---- 130 (283)
T COG2230 63 LILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRL------QD---- 130 (283)
T ss_pred HHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEe------cc----
Confidence 356778999999999999977 7788888999999 99999999987776654 5543 1110 11
Q ss_pred HHHhhCCCcCEEEE-----CCCC---hHHHHHHHHHhhcCCceEEEECccC
Q 017457 247 IKEMTDGGADYCFE-----CIGL---TSVMNDAFNSSREGWGKTVILGVEM 289 (371)
Q Consensus 247 i~~~~~gg~d~vid-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~ 289 (371)
.+++.+ .||-|+. .+|. +..+..+-+.|+++ |++.+.....
T Consensus 131 ~rd~~e-~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~ 179 (283)
T COG2230 131 YRDFEE-PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITG 179 (283)
T ss_pred cccccc-ccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecC
Confidence 111222 4776653 3443 23478888999997 9988877643
No 295
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.83 E-value=0.032 Score=54.88 Aligned_cols=78 Identities=24% Similarity=0.376 Sum_probs=55.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hHHHHHHHhCcceEEcCCCCCCc
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP---------------------EKFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~---------------------~~~~~~~~lga~~v~~~~~~~~~ 241 (371)
.+++|+|+|+|+.|+.++..++..|+ .|++.+..+ ...++++++|++..++..-. .
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~--~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG--R 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC--C
Confidence 57899999999999999999999999 788887653 24567788898765553220 1
Q ss_pred cHHHHHHHhhCCCcCEEEECCCChH
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLTS 266 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~~ 266 (371)
+. .+..+.. ++|.||.++|...
T Consensus 217 ~~--~~~~~~~-~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLLE-DYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHHh-cCCEEEEEeCCCC
Confidence 11 1122222 6999999998743
No 296
>PLN02253 xanthoxin dehydrogenase
Probab=95.83 E-value=0.052 Score=49.23 Aligned_cols=79 Identities=20% Similarity=0.246 Sum_probs=49.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCc--c-eE--EcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGI--T-DF--INPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga--~-~v--~~~~~~~~~~~~~~i~~~~~--g 253 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+ .+++. . .. .|-.+ .+...+.+..... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 4789999998 9999998888888899 899998877654443 22321 1 12 22222 1222222232222 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 78999998763
No 297
>PLN02476 O-methyltransferase
Probab=95.82 E-value=0.088 Score=47.64 Aligned_cols=107 Identities=14% Similarity=0.193 Sum_probs=69.7
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKE 249 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~ 249 (371)
+....+..+.++||=+|.+. |..++.+|+.++- .+|+.++.+++..+.+++ .|..+-+.... .+..+.+.+
T Consensus 110 L~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~ 185 (278)
T PLN02476 110 LAMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKS 185 (278)
T ss_pred HHHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHH
Confidence 34456678889999998743 6677778887642 279999999988777644 56542222222 344455554
Q ss_pred hh----CCCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEEEC
Q 017457 250 MT----DGGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 250 ~~----~gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+. .+.||.|| |+--. ...++.+++.++++ |.++.=.
T Consensus 186 l~~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 186 MIQNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred HHhcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 42 23799997 55433 33478889999997 8876544
No 298
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.064 Score=47.22 Aligned_cols=80 Identities=9% Similarity=0.048 Sum_probs=50.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--C-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--G- 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--g- 253 (371)
+++++||+|+ +++|.+.+.-+...|+ +|+.+.++.++.+.+. +.+.+ ..+.-+..+.++..+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999998 8999998888888999 8999998888765442 23432 1221111111223222332221 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 6899999886
No 299
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.81 E-value=0.2 Score=41.63 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=59.6
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 264 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~ 264 (371)
.+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+... .+..+.+. ..|+||-|+.+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~s~~e~~~-----~~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA--------DSPAEAAE-----QADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE--------SSHHHHHH-----HBSEEEE-SSS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh--------hhhhhHhh-----cccceEeeccc
Confidence 368899999999998888888999 99999999999999888875432 23333333 36899988887
Q ss_pred hHHHHHHHH------HhhcCCceEEEECc
Q 017457 265 TSVMNDAFN------SSREGWGKTVILGV 287 (371)
Q Consensus 265 ~~~~~~~~~------~l~~~~G~~v~~g~ 287 (371)
.......+. .+.++ ..+++++.
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~sT 95 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMST 95 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-SS
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecCC
Confidence 654555444 34454 56676664
No 300
>PRK08589 short chain dehydrogenase; Validated
Probab=95.81 E-value=0.058 Score=48.79 Aligned_cols=79 Identities=23% Similarity=0.306 Sum_probs=49.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh---Ccc-eE--EcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF---GIT-DF--INPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l---ga~-~v--~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ +++|.+.+..+...|+ +|++++++++..+.++++ +.+ .. .|-.+ ..+....+.+... +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 5789999998 9999998888888899 899998883322223332 321 12 23222 1222233333322 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|+++++.|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 68999988763
No 301
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.054 Score=48.48 Aligned_cols=81 Identities=20% Similarity=0.170 Sum_probs=51.2
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH----HHHhCcce---EEcCCCCCCccHHHHHHHhh--
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI----GKKFGITD---FINPATCGDKTVSQVIKEMT-- 251 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~----~~~lga~~---v~~~~~~~~~~~~~~i~~~~-- 251 (371)
-++++++|+|+ |++|...++.+...|+++|++++++.++.+. ++..+... ..|..+ ...+.+.+....
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEA 81 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHH
Confidence 35789999998 9999999999999999449999988765542 22334321 123222 122222222221
Q ss_pred CCCcCEEEECCCC
Q 017457 252 DGGADYCFECIGL 264 (371)
Q Consensus 252 ~gg~d~vid~~g~ 264 (371)
-+++|+++++.+.
T Consensus 82 ~g~id~li~~ag~ 94 (260)
T PRK06198 82 FGRLDALVNAAGL 94 (260)
T ss_pred hCCCCEEEECCCc
Confidence 1379999999874
No 302
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.068 Score=47.83 Aligned_cols=77 Identities=14% Similarity=0.115 Sum_probs=49.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc--c-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--T-DFI--NPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga--~-~v~--~~~~~~~~~~~~~i~~~~~--gg 254 (371)
++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +.. + ..+ |-.+ .+...+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999997 9999999988888899 89999998877665433 221 1 122 2221 1223332233222 26
Q ss_pred cCEEEECCC
Q 017457 255 ADYCFECIG 263 (371)
Q Consensus 255 ~d~vid~~g 263 (371)
+|+++++.|
T Consensus 79 id~lv~~ag 87 (257)
T PRK07024 79 PDVVIANAG 87 (257)
T ss_pred CCEEEECCC
Confidence 899999876
No 303
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.089 Score=47.10 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc-eEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT-DFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~-~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
.++++||+|+ +++|...++.+...|+ +|+++++++++.+.+.+ + +.. .++..+- .+.+-...+.+.. +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~-g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDL-SSPEAREQLAAEA-GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecC-CCHHHHHHHHHHh-CCC
Confidence 4789999998 9999999988888999 99999988876655332 2 322 2222111 0122222222211 379
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998774
No 304
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.79 E-value=0.065 Score=47.90 Aligned_cols=81 Identities=19% Similarity=0.203 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+.+. .+..+-.+.....+.+.... -+.
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999998 9999999998888999 899999888655443 2334332 22211101122222222221 126
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 305
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.79 E-value=0.062 Score=49.97 Aligned_cols=78 Identities=21% Similarity=0.186 Sum_probs=49.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhC---cc-eEE--cCCCCCCccHHHHHHHhh--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG---IT-DFI--NPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg---a~-~v~--~~~~~~~~~~~~~i~~~~--~ 252 (371)
+++++||+|+ |++|...++.+...|+ +|++++++.++.+.+ +++. .. .++ |-.+ .....+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 5789999998 9999999888888898 899999888776543 2232 11 122 2222 122222222221 2
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+.+|++|++.|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999877
No 306
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.78 E-value=0.036 Score=47.90 Aligned_cols=105 Identities=23% Similarity=0.306 Sum_probs=69.0
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~ 250 (371)
...+..+.++||-+|.+. |..++.+|+++ +. +|+.++.++++.+.+++ .|...-+.... .+..+.+.++
T Consensus 39 ~l~~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~---gda~~~l~~l 113 (205)
T PF01596_consen 39 MLVRLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE---GDALEVLPEL 113 (205)
T ss_dssp HHHHHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE---S-HHHHHHHH
T ss_pred HHHHhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE---eccHhhHHHH
Confidence 345566778999999754 78888888876 45 99999999998777754 45432122222 3445555555
Q ss_pred hC----CCcCEEE-ECCCCh--HHHHHHHHHhhcCCceEEEECc
Q 017457 251 TD----GGADYCF-ECIGLT--SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 251 ~~----gg~d~vi-d~~g~~--~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
.. +.||.|| |+--.. ..+..+++.++++ |.++.=..
T Consensus 114 ~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~ 156 (205)
T PF01596_consen 114 ANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNV 156 (205)
T ss_dssp HHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETT
T ss_pred HhccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEccc
Confidence 42 3699997 765442 2467888999997 77765543
No 307
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.77 E-value=0.063 Score=47.97 Aligned_cols=80 Identities=14% Similarity=0.214 Sum_probs=48.8
Q ss_pred CCCeEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc--eEEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGLG---AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT--DFINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~g---~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~--~v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
.++++||+|++ ++|.+.++.+...|+ +|+++.++++..+.++++... ..+.-+-.+.++..+.+.+... +.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 57899999874 899998888888999 899988875434444443221 1221111011223333333222 379
Q ss_pred CEEEECCC
Q 017457 256 DYCFECIG 263 (371)
Q Consensus 256 d~vid~~g 263 (371)
|+++++.|
T Consensus 85 D~lv~nAg 92 (252)
T PRK06079 85 DGIVHAIA 92 (252)
T ss_pred CEEEEccc
Confidence 99998876
No 308
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.77 E-value=0.055 Score=48.43 Aligned_cols=78 Identities=21% Similarity=0.251 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcce-E--EcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGITD-F--INPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~~-v--~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++++++...+...+ .+.+. . .|..+ .++..+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 4689999998 9999999998888999 89999887543333332 24321 1 23222 1222333333222 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 309
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.76 E-value=0.061 Score=48.11 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=49.3
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCc--ceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-----FGI--TDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga--~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
++++||+|+ |.+|.+.+..+...|+ +|+.++++.++.+.+.+ .+. .+.+..+-.+..+..+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 578999998 9999999888888899 89999988765544322 121 12222221011222222333221 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 78999998863
No 310
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=95.76 E-value=0.035 Score=45.93 Aligned_cols=80 Identities=24% Similarity=0.250 Sum_probs=48.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN--PEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~--~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+++||+|+ +++|.+.++.+...|..+|+.+.++ .++.+.+ +..+.. .++..+-.+.++....+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 57999998 9999998887777777688888888 4433332 333432 223222111233333333333 237
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|++.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 8999988875
No 311
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.075 Score=47.42 Aligned_cols=75 Identities=21% Similarity=0.290 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++. ++.+... .+....+..+- .+. +.+.+.. +.+|++++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~---~~~-~~~~~~~-~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC---GKE-ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC---CCH-HHHHHhc-CCCCEEEE
Confidence 4689999998 9999999998888999 899888775 2222211 11122222111 122 2233332 36999999
Q ss_pred CCCC
Q 017457 261 CIGL 264 (371)
Q Consensus 261 ~~g~ 264 (371)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 8874
No 312
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.74 E-value=0.065 Score=47.84 Aligned_cols=79 Identities=20% Similarity=0.296 Sum_probs=49.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH--HHHHHHhCcce-E--EcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK--FEIGKKFGITD-F--INPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~--~~~~~~lga~~-v--~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++.++... .+.+++.+.+. + .|-.+ .++..+.+.+.. -++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999998888999 88888765421 22334444321 2 23222 123333333322 137
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 8999998773
No 313
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.74 E-value=0.09 Score=45.33 Aligned_cols=81 Identities=32% Similarity=0.398 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
-.|++++|.|.|.+|..+++.+...|+ +|+++++++++.+.+.+ +|+. .++.++ + ....+|+++.
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----l-------~~~~~Dv~vp 91 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----I-------YSVDADVFAP 91 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----h-------ccccCCEEEe
Confidence 467899999999999999999999999 99999999888777654 4643 333221 1 1115888886
Q ss_pred CCCChHHHHHHHHHhh
Q 017457 261 CIGLTSVMNDAFNSSR 276 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l~ 276 (371)
|..+...-...++.++
T Consensus 92 ~A~~~~I~~~~~~~l~ 107 (200)
T cd01075 92 CALGGVINDDTIPQLK 107 (200)
T ss_pred cccccccCHHHHHHcC
Confidence 6554443445556664
No 314
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.068 Score=48.36 Aligned_cols=77 Identities=17% Similarity=0.152 Sum_probs=50.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Ccc-eE--EcCCCCCCccHHHHHHHhh--CCCcCE
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GIT-DF--INPATCGDKTVSQVIKEMT--DGGADY 257 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~-~v--~~~~~~~~~~~~~~i~~~~--~gg~d~ 257 (371)
+++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++. +.. .+ .|..+ ...+.+.+.+.. .+++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999997 9999999988888899 899999988877665442 221 12 22222 122223333222 137899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
+|++.|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998774
No 315
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.74 E-value=0.08 Score=46.65 Aligned_cols=78 Identities=15% Similarity=0.098 Sum_probs=50.0
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
++++||+|+ +++|.+.++.+...|+ +|++++++++. .+.+++.++..+ .|-.+ ..+..+.+.+... +++|++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST--NAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC--HHHHHHHHHHHHhhCCCccEE
Confidence 468999998 9999999998888999 89999877643 333444554221 23221 1233333333322 268999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 998774
No 316
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.73 E-value=0.07 Score=48.43 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=50.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 252 (371)
.++++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+. ..+.+ ..+ |-.+ ..+..+.+.+...
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 5789999997 9999999998888999 8999988876655432 23432 122 2211 1222222222221
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 368999998873
No 317
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.72 E-value=0.28 Score=44.24 Aligned_cols=102 Identities=17% Similarity=0.157 Sum_probs=60.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHHhCcc-eEEcCCCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGIT-DFINPATC 238 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~lga~-~v~~~~~~ 238 (371)
.+.+|+|+|+|++|..++..+-..|..+++.++...- | .+++.++..+ .+....++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4578999999999999999999999889999885411 1 1122233322 22222211
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
.. .+.+.++....+|+|+||.+....-..+.+......=.++..+.
T Consensus 109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 11 12233333337999999999865344444444443135666654
No 318
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.079 Score=47.01 Aligned_cols=77 Identities=21% Similarity=0.260 Sum_probs=49.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----h--Ccc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----F--GIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----l--ga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.. . +.. +++ |..+ .+++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 578999998 9999998888877898 89999988877655432 1 211 222 3222 1233333333322
Q ss_pred -CCcCEEEECCC
Q 017457 253 -GGADYCFECIG 263 (371)
Q Consensus 253 -gg~d~vid~~g 263 (371)
+++|+++++.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 37899999876
No 319
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.069 Score=48.42 Aligned_cols=78 Identities=15% Similarity=0.163 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCc---ceEE--cCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGI---TDFI--NPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga---~~v~--~~~~~~~~~~~~~i~~~~~ 252 (371)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+. ..++ |..+ .+++.+ +.+...
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~ 77 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLK 77 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHH
Confidence 3578999998 9999999988888899 89999888776554432 221 1222 3222 122322 333322
Q ss_pred --CCcCEEEECCCC
Q 017457 253 --GGADYCFECIGL 264 (371)
Q Consensus 253 --gg~d~vid~~g~ 264 (371)
+++|+++.+.|.
T Consensus 78 ~~~~id~vv~~ag~ 91 (280)
T PRK06914 78 EIGRIDLLVNNAGY 91 (280)
T ss_pred hcCCeeEEEECCcc
Confidence 378999998763
No 320
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.69 E-value=0.064 Score=54.90 Aligned_cols=77 Identities=27% Similarity=0.308 Sum_probs=55.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHhCcceEEcCCCCCCc
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 241 (371)
.+++|+|+|+|+.|+.++..++..|+ +|++.++.+. +.++++++|++..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988886652 4566778888766654320011
Q ss_pred cHHHHHHHhhCCCcCEEEECCCCh
Q 017457 242 TVSQVIKEMTDGGADYCFECIGLT 265 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~~ 265 (371)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 2222 2799999998864
No 321
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.68 E-value=0.11 Score=44.57 Aligned_cols=77 Identities=19% Similarity=0.184 Sum_probs=50.8
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccce-EEcCCCCCCccHHHHHHHhhCCC
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GITD-FINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~~-v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
.++++++|+|+ |.+|.+.+..+...|+ +|+++.++.++.+.+.+ + +... ..+..+ . +.+.+... +
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-----~-~~~~~~~~-~ 97 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-----D-AARAAAIK-G 97 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-----H-HHHHHHHh-c
Confidence 36789999997 9999988888878888 89999998887665433 2 2221 112111 1 11222222 6
Q ss_pred cCEEEECCCChH
Q 017457 255 ADYCFECIGLTS 266 (371)
Q Consensus 255 ~d~vid~~g~~~ 266 (371)
+|+||.+++...
T Consensus 98 ~diVi~at~~g~ 109 (194)
T cd01078 98 ADVVFAAGAAGV 109 (194)
T ss_pred CCEEEECCCCCc
Confidence 899999887655
No 322
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.68 E-value=0.085 Score=48.01 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=56.9
Q ss_pred CCCCCeEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 181 VEVGSTVAIFGLGA-VGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 181 ~~~g~~VLI~G~g~-~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
.-.|++|+|+|.|+ +|...+.++...|+ +|+++.+... ++.+.+ ..+|+++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~----------------------~L~~~~-----~~aDIvI 207 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ----------------------NLPELV-----KQADIIV 207 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch----------------------hHHHHh-----ccCCEEE
Confidence 46789999999976 99999999999999 8888865211 121111 2689999
Q ss_pred ECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 260 ECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 260 d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+++|.+..+. .+.++++ ..++++|..
T Consensus 208 ~AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 208 GAVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred EccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 9998766332 3558887 889999864
No 323
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.079 Score=46.89 Aligned_cols=43 Identities=16% Similarity=0.138 Sum_probs=35.8
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG 228 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg 228 (371)
+++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~ 45 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQS 45 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc
Confidence 57999998 9999988888888899 8999999988877665533
No 324
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.076 Score=47.41 Aligned_cols=81 Identities=14% Similarity=0.194 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-HHH----HHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE-KFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~----~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ +++|.+.++.+...|+ +|++++++.+ ..+ .++..+.. ..+..+-.+..+..+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4789999997 9999999999988999 8888887643 222 22233422 1222111111233333333221 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|+++++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 325
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.65 E-value=0.085 Score=47.15 Aligned_cols=80 Identities=20% Similarity=0.353 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
.++++||+|+ |++|...+..+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+..+..+.+.+... +.+|+
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI 83 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3678999998 9999999999888999 89999998887665433 3321 1222111011223333333221 36899
Q ss_pred EEECCC
Q 017457 258 CFECIG 263 (371)
Q Consensus 258 vid~~g 263 (371)
++++.+
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 998876
No 326
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.64 E-value=0.12 Score=45.53 Aligned_cols=103 Identities=22% Similarity=0.281 Sum_probs=72.0
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHh
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRA-SKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~-~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~ 250 (371)
....++.+|++|+=.|.|. |.+++.||++.|- .+|+..+..++..+.+++ +|....+.... .|. .+.
T Consensus 87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv----~~~ 158 (256)
T COG2519 87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDV----REG 158 (256)
T ss_pred HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccc----ccc
Confidence 3567899999999888766 7888889987765 599999988887776644 45433221111 222 222
Q ss_pred hCC-CcCEEE-ECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457 251 TDG-GADYCF-ECIGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 251 ~~g-g~d~vi-d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
..+ .+|.+| |.-.--..++.+.+.|+++ |.++.+.-
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P 196 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP 196 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence 222 788886 6655556689999999998 99998864
No 327
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.63 E-value=0.084 Score=47.14 Aligned_cols=81 Identities=17% Similarity=0.238 Sum_probs=49.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--HHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE--KFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
+|+++||+|+ |++|.+.++.+...|+ +|+.+++.+. ..+.+.+.+.. ..+..+-.+.++..+.+.+... +.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999998 9999999999888999 8888765432 22334444432 1222221111233333333222 3789
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+++++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998874
No 328
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.63 E-value=0.1 Score=47.36 Aligned_cols=93 Identities=16% Similarity=0.083 Sum_probs=60.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhC---cceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFG---ITDFINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lg---a~~v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
..++++++|+|+|++|.+.+..+...|+ +|+++.+++++.+.+. .+. ...... +. +.....+|
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~--------~~----~~~~~~~D 180 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS--------MD----ELPLHRVD 180 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec--------hh----hhcccCcc
Confidence 3557899999999999998888888898 8999999887765543 332 111211 11 11112689
Q ss_pred EEEECCCChHH--H---HHHHHHhhcCCceEEEECc
Q 017457 257 YCFECIGLTSV--M---NDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 257 ~vid~~g~~~~--~---~~~~~~l~~~~G~~v~~g~ 287 (371)
++++|++.... . ......++++ ..++++..
T Consensus 181 ivInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 181 LIINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 99999986420 1 1123456675 67887865
No 329
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.60 E-value=0.38 Score=37.14 Aligned_cols=92 Identities=18% Similarity=0.180 Sum_probs=61.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCChH
Q 017457 187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLTS 266 (371)
Q Consensus 187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~~ 266 (371)
|+|.|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++..+. .-.+.+++..-..++.++-++++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999776 899999999999999988855 443333 2233444443338899988877655
Q ss_pred HH---HHHHHHhhcCCceEEEE
Q 017457 267 VM---NDAFNSSREGWGKTVIL 285 (371)
Q Consensus 267 ~~---~~~~~~l~~~~G~~v~~ 285 (371)
.- -...+.+.+. .+++..
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEE
Confidence 22 2233344444 455544
No 330
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.24 Score=43.65 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=59.5
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHH----HHHHhCcc-eEEcCCCCCCccHHHHHHHhh--C
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFE----IGKKFGIT-DFINPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~----~~~~lga~-~v~~~~~~~~~~~~~~i~~~~--~ 252 (371)
.+++++||+|+ |++|...+..+...|+ +++.+.++. .+.+ .+.+.+.. ..+..+-.+..+..+.+.+.. .
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF 81 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35789999997 9999999999988999 777765543 2222 22233432 222211101122222222221 1
Q ss_pred CCcCEEEECCCChH-------------------------HHHHHHHHhhcCCceEEEECc
Q 017457 253 GGADYCFECIGLTS-------------------------VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 gg~d~vid~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+++|++|++.|... .++.+++.+... |+++.++.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss 140 (245)
T PRK12937 82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLST 140 (245)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEee
Confidence 37899999887310 123444555565 88888875
No 331
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.58 E-value=0.19 Score=45.96 Aligned_cols=37 Identities=27% Similarity=0.140 Sum_probs=31.0
Q ss_pred CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
.-+++++||+|+ |++|...+..+...|+ +|+++.++.
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~ 80 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDE 80 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCc
Confidence 445789999998 9999998888888899 888887764
No 332
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.58 E-value=0.23 Score=43.45 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=62.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh------hHH-----------------HHHHHhCcc-eEEcCCCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP------EKF-----------------EIGKKFGIT-DFINPATC 238 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~------~~~-----------------~~~~~lga~-~v~~~~~~ 238 (371)
+..+|+|+|.|++|.+++..+-..|+.++..++... +|. +++++.... +|-..+.
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 457899999999999999999999999998887422 111 111122211 2222222
Q ss_pred CCccHHHHHHHhhCCCcCEEEECCCChHHHHHHHH-HhhcCCceEEEECc
Q 017457 239 GDKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFN-SSREGWGKTVILGV 287 (371)
Q Consensus 239 ~~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~-~l~~~~G~~v~~g~ 287 (371)
.-..+.+.++...++|+|+||..+-.+--.++. |.++. =.+|..+.
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~G 154 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMG 154 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecc
Confidence 112234455566699999999997663333444 55554 56776664
No 333
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.57 E-value=0.039 Score=49.77 Aligned_cols=77 Identities=19% Similarity=0.289 Sum_probs=50.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
.+++++|+|+ |++|...++.+...|+ +|++++++.++.+.. .+...+ .|..+ .+++.+.+..... +.+|++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTD--DASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEE
Confidence 4578999998 9999999888888899 899999887654332 122221 23222 1333333333322 368999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
|++.|.
T Consensus 78 i~~ag~ 83 (270)
T PRK06179 78 VNNAGV 83 (270)
T ss_pred EECCCC
Confidence 999884
No 334
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=95.57 E-value=0.14 Score=45.16 Aligned_cols=105 Identities=17% Similarity=0.345 Sum_probs=71.3
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhh
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~ 251 (371)
.......+|++||=+|+|. |-.|..+++..|..+|+++|.+++-++.+++ .|... +..-. .+. +.+ ...
T Consensus 44 i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~dA-e~L-Pf~ 116 (238)
T COG2226 44 ISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GDA-ENL-PFP 116 (238)
T ss_pred HHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ech-hhC-CCC
Confidence 3345566899999987765 8899999999886699999999998777654 22221 11111 111 111 122
Q ss_pred CCCcCEEEECCCC------hHHHHHHHHHhhcCCceEEEECcc
Q 017457 252 DGGADYCFECIGL------TSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 252 ~gg~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+..||+|.-+.|- ..+++++.|.|+|+ |+++.+...
T Consensus 117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~ 158 (238)
T COG2226 117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFS 158 (238)
T ss_pred CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcC
Confidence 3378988766553 34689999999998 998888763
No 335
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.56 E-value=0.11 Score=47.21 Aligned_cols=79 Identities=23% Similarity=0.325 Sum_probs=55.9
Q ss_pred CCCCeEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhHHHHHHH-----hCc---ceEEcCCCCCCccHHHHHHHhh
Q 017457 182 EVGSTVAIFGL-GAVGLA-VAEGARLNRASKIIGVDINPEKFEIGKK-----FGI---TDFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~-ai~la~~~g~~~Vi~~~~~~~~~~~~~~-----lga---~~v~~~~~~~~~~~~~~i~~~~ 251 (371)
+-|++.+|+|+ .++|.+ |-+||+ .|. +|+.+.|+.+|++..++ .++ ..++|..+ +++ .-+.+++..
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~-~~~-~ye~i~~~l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK-GDE-VYEKLLEKL 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC-Cch-hHHHHHHHh
Confidence 34689999998 899977 666666 999 89999999999887643 332 24556555 112 244555555
Q ss_pred CC-CcCEEEECCCC
Q 017457 252 DG-GADYCFECIGL 264 (371)
Q Consensus 252 ~g-g~d~vid~~g~ 264 (371)
.+ .+-+.+|++|-
T Consensus 123 ~~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 123 AGLDVGILVNNVGM 136 (312)
T ss_pred cCCceEEEEecccc
Confidence 55 67788899885
No 336
>PRK08264 short chain dehydrogenase; Validated
Probab=95.56 E-value=0.086 Score=46.44 Aligned_cols=75 Identities=17% Similarity=0.208 Sum_probs=48.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhhCCCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~gg~d~v 258 (371)
.++++||+|+ |.+|...+..+...|+++|+++.++.++.+. .+.. .++ |-.+ .+-.+.+.+.. +.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~---~~~~~~~~~~~-~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD---PASVAAAAEAA-SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC---HHHHHHHHHhc-CCCCEE
Confidence 4678999997 9999999999988998678988887766543 2221 222 2222 22222222211 258999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
|.+.|.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 988875
No 337
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.095 Score=47.24 Aligned_cols=80 Identities=14% Similarity=0.180 Sum_probs=47.1
Q ss_pred CCCeEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-G--AVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g--~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ + ++|.+.+..+...|+ +|+.+++++...+.+++ .+....+.-+-.+.++..+.+.+... +
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 83 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWP 83 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcC
Confidence 5789999997 3 899998888888899 88888776321222322 22222222111111233333333322 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 84 ~iD~linnAg 93 (262)
T PRK07984 84 KFDGFVHSIG 93 (262)
T ss_pred CCCEEEECCc
Confidence 6899999887
No 338
>PRK06720 hypothetical protein; Provisional
Probab=95.54 E-value=0.12 Score=43.26 Aligned_cols=39 Identities=26% Similarity=0.204 Sum_probs=32.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE 222 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~ 222 (371)
+++.++|+|+ +++|...+......|+ +|++++++.++.+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~ 54 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQ 54 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHH
Confidence 5789999998 8999998888888899 8999998776543
No 339
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=95.54 E-value=0.06 Score=48.77 Aligned_cols=82 Identities=18% Similarity=0.140 Sum_probs=53.7
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc------eEEcCCCC-CCccHHHHHHH
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT------DFINPATC-GDKTVSQVIKE 249 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~------~v~~~~~~-~~~~~~~~i~~ 249 (371)
-.|+.+||+|+ .++|.+.+..+...|+ +|+++.+++++.+...+ .+.. .+.|-... ..+...+...+
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 46889999987 8999999999999999 99999999988665433 2221 22232220 01112222223
Q ss_pred hhCCCcCEEEECCCC
Q 017457 250 MTDGGADYCFECIGL 264 (371)
Q Consensus 250 ~~~gg~d~vid~~g~ 264 (371)
...|+.|+.++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334579999988774
No 340
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.066 Score=47.75 Aligned_cols=75 Identities=16% Similarity=0.236 Sum_probs=48.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eE--EcCCCCCCccHHHHHHHhhC--CCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DF--INPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v--~~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++ ...+.. .+ .|..+ .++..+.+..... +.+|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 77 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLD 77 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCC
Confidence 5789999998 9999999988888999 89999987655 112211 12 23222 1223333332221 3689
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
++|++.|.
T Consensus 78 ~vi~~ag~ 85 (252)
T PRK07856 78 VLVNNAGG 85 (252)
T ss_pred EEEECCCC
Confidence 99998763
No 341
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.51 E-value=0.067 Score=47.87 Aligned_cols=80 Identities=20% Similarity=0.230 Sum_probs=48.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++.++ ++.+.+ .+.+.+ .++..+-.+.+...+.+.+... +.
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999998 9999999999888999 88888876 333322 223322 2222211111222223333221 36
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 8999998774
No 342
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.50 E-value=0.089 Score=46.59 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
.++++||+|+ |.+|...+..+...|+ +|++++++.++...+ ...+.. .++..+-.+...+.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999998 9999999888888899 899999886554332 222322 1222111011222222222221 26
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.+.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999988754
No 343
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.50 E-value=0.1 Score=45.58 Aligned_cols=93 Identities=13% Similarity=0.024 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.++.+|||+|+|.++.-=+..+...|+ +|+++++.-. .+..+.+.|.-..+. ++ +... .+ .++++||-
T Consensus 23 ~~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~-----~~~~--dl--~g~~LVia 91 (223)
T PRK05562 23 SNKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN-----YDKE--FI--KDKHLIVI 91 (223)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC-----CChH--Hh--CCCcEEEE
Confidence 357899999999999988888888999 8888875432 222232333222221 12 1111 11 27899999
Q ss_pred CCCChHHHHHHHHHh-hcCCceEEEECc
Q 017457 261 CIGLTSVMNDAFNSS-REGWGKTVILGV 287 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 287 (371)
+++++. ++..+... +.. +.++....
T Consensus 92 ATdD~~-vN~~I~~~a~~~-~~lvn~vd 117 (223)
T PRK05562 92 ATDDEK-LNNKIRKHCDRL-YKLYIDCS 117 (223)
T ss_pred CCCCHH-HHHHHHHHHHHc-CCeEEEcC
Confidence 999988 55555544 444 66666654
No 344
>PRK04457 spermidine synthase; Provisional
Probab=95.49 E-value=0.2 Score=45.22 Aligned_cols=94 Identities=16% Similarity=0.220 Sum_probs=64.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc----c--eEEcCCCCCCccHHHHHHHhhCCC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI----T--DFINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga----~--~v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
.++++||++|.|+ |.++..+++.....+|++++.+++-.+.+++. +. + .++. .+..+.+... .+.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4568899999876 77888888776433899999999988888763 31 1 2222 2344444332 237
Q ss_pred cCEEE-ECCCC---------hHHHHHHHHHhhcCCceEEE
Q 017457 255 ADYCF-ECIGL---------TSVMNDAFNSSREGWGKTVI 284 (371)
Q Consensus 255 ~d~vi-d~~g~---------~~~~~~~~~~l~~~~G~~v~ 284 (371)
+|+|+ |...+ ...++.+.+.|+++ |.++.
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 99997 54322 24578899999998 99876
No 345
>PRK07574 formate dehydrogenase; Provisional
Probab=95.48 E-value=0.15 Score=48.61 Aligned_cols=89 Identities=22% Similarity=0.246 Sum_probs=56.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.|++|.|+|.|.+|...++.++..|. +|++.+++....+..+.+|+... .++.+.+ . ..|+|+.+.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell----~-~aDvV~l~l 256 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLV----S-VCDVVTIHC 256 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHh----h-cCCEEEEcC
Confidence 57899999999999999999999999 99999987643333334443211 1222221 1 467777665
Q ss_pred CChHHH-----HHHHHHhhcCCceEEEEC
Q 017457 263 GLTSVM-----NDAFNSSREGWGKTVILG 286 (371)
Q Consensus 263 g~~~~~-----~~~~~~l~~~~G~~v~~g 286 (371)
+..... ...+..|+++ ..+|.++
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 532211 2445566665 6666655
No 346
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.48 E-value=0.1 Score=46.75 Aligned_cols=79 Identities=24% Similarity=0.333 Sum_probs=49.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH---hCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK---FGIT-DFI--NPATCGDKTVSQVIKEMT--DG 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~---lga~-~v~--~~~~~~~~~~~~~i~~~~--~g 253 (371)
+++++||+|+ |++|...+..+...|+ +|+.++++++..+...+ .+.. ..+ |-.+ ..+..+.+.+.. .+
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4689999998 9999999998888999 89999988754333332 2322 122 2211 122222222221 13
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
.+|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 68999998873
No 347
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.46 E-value=0.31 Score=43.35 Aligned_cols=38 Identities=18% Similarity=0.128 Sum_probs=30.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKF 221 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~ 221 (371)
.++++||+|+ +++|.+.++.+...|+ +|+++. +..++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4789999998 9999999999988999 787764 444443
No 348
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.45 E-value=0.15 Score=42.72 Aligned_cols=93 Identities=13% Similarity=0.265 Sum_probs=60.8
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 264 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~ 264 (371)
+|.|+|+ |-+|...++-|+.+|. .|+++.+++.|....+.. .++..+- .+..+....+ .|+|+||++.+.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~---~i~q~Di---fd~~~~a~~l--~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV---TILQKDI---FDLTSLASDL--AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc---eeecccc---cChhhhHhhh--cCCceEEEeccC
Confidence 5788898 9999999999999999 999999999887654221 1221111 1111111112 189999998875
Q ss_pred hH---------HHHHHHHHhhcC-CceEEEECc
Q 017457 265 TS---------VMNDAFNSSREG-WGKTVILGV 287 (371)
Q Consensus 265 ~~---------~~~~~~~~l~~~-~G~~v~~g~ 287 (371)
.. ..+.++..++.. .-++..+|.
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 41 244567777763 137777775
No 349
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.44 E-value=0.11 Score=45.79 Aligned_cols=81 Identities=17% Similarity=0.197 Sum_probs=50.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcc-eEEcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGIT-DFINPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
+++++||+|+ |.+|...+..+...|+ +|+...++.++.+.+. .++.. .++..+-.+.+...+.+.+... +++|+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999998 9999999888888998 8888888877666543 34422 1222111011222222222221 37899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9998874
No 350
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.44 E-value=0.11 Score=46.35 Aligned_cols=80 Identities=16% Similarity=0.243 Sum_probs=51.5
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
-+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+. +.+.. ..+ |-.+ ..++.+.+.+...
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 85 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAE 85 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHh
Confidence 35889999998 9999998888888899 8999998876654432 23421 122 2222 1223333333222
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+.+|.++.+.|.
T Consensus 86 ~~~id~vi~~ag~ 98 (256)
T PRK06124 86 HGRLDILVNNVGA 98 (256)
T ss_pred cCCCCEEEECCCC
Confidence 368999988774
No 351
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.41 E-value=0.13 Score=41.20 Aligned_cols=97 Identities=23% Similarity=0.224 Sum_probs=57.0
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hHHH----HHHHhCc-ceEEcCCCCC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-------------------EKFE----IGKKFGI-TDFINPATCG 239 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-------------------~~~~----~~~~lga-~~v~~~~~~~ 239 (371)
..+|+|.|+|++|...+..+-..|.++++.++... .|.+ .++++.. .++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 46899999999999999998888998899987521 1222 2233322 12221111
Q ss_pred CccH-HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCc-eEEEEC
Q 017457 240 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG 286 (371)
Q Consensus 240 ~~~~-~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g 286 (371)
.+ .+...++. .++|+||+|+.+......+.+..... + .++..+
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~ 124 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG 124 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence 11 12233333 27899999999877444555555554 5 444444
No 352
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.11 Score=46.43 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=49.6
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCc--ceE--EcCCCCCCccHHHHHHHhhC--CCc
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGI--TDF--INPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga--~~v--~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
++++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +.. -++ .|-.+ .+...+.+.+... +++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~~ 78 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD--AASLAAALANAAAERGPV 78 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCC
Confidence 568999998 9999998888878899 89999988877655433 221 112 22222 1222222322221 268
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (257)
T PRK07074 79 DVLVANAGA 87 (257)
T ss_pred CEEEECCCC
Confidence 999998874
No 353
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.21 Score=43.48 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcceEEcCCCCCCccHHHHHHHhhCC--CcCEEE
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITDFINPATCGDKTVSQVIKEMTDG--GADYCF 259 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~v~~~~~~~~~~~~~~i~~~~~g--g~d~vi 259 (371)
.+++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+- .+ .+.+.+.... +.|.+|
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEE
Confidence 368999998 99999888777666 6 89999998877655543 21122332222 22 2233333332 699999
Q ss_pred ECCCC
Q 017457 260 ECIGL 264 (371)
Q Consensus 260 d~~g~ 264 (371)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
No 354
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.41 E-value=0.096 Score=47.24 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=52.0
Q ss_pred CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH----HHHHHHhC-c-ceEEcCCCCCCccHHHHHHHhhCC
Q 017457 181 VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK----FEIGKKFG-I-TDFINPATCGDKTVSQVIKEMTDG 253 (371)
Q Consensus 181 ~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~----~~~~~~lg-a-~~v~~~~~~~~~~~~~~i~~~~~g 253 (371)
--+|+.|||+|+ +++|.+.++-...+|+ +++..+.+.+. .+.+++.| + .++.|-.+ .++..+...+....
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e 111 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKE 111 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHh
Confidence 346899999987 8999987777777888 88888876653 33444445 2 23444322 13333333333322
Q ss_pred --CcCEEEECCCC
Q 017457 254 --GADYCFECIGL 264 (371)
Q Consensus 254 --g~d~vid~~g~ 264 (371)
.+|+++|..|-
T Consensus 112 ~G~V~ILVNNAGI 124 (300)
T KOG1201|consen 112 VGDVDILVNNAGI 124 (300)
T ss_pred cCCceEEEecccc
Confidence 78999998884
No 355
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.38 E-value=0.11 Score=46.31 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=50.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
.++++||+|+ +++|...+..+...|+ +|+.++++.++.+.+. +.+.+ ++ .|..+ ..+..+.+.....
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999998 9999999988888999 8888888776654432 22322 22 23222 1222222332222
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+++|+++++.+.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 378999998773
No 356
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.37 E-value=0.36 Score=42.76 Aligned_cols=102 Identities=21% Similarity=0.210 Sum_probs=59.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHH----HHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFE----IGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~----~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
.++++||+|+ |.+|...+.-+...|+ +|+.+.+ +.++.. .+++.+.. ..+ |..+ ..+....+.++..
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDR 81 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHH
Confidence 3689999998 9999998888888999 7766553 322222 22333332 222 2222 1222222333222
Q ss_pred -CCcCEEEECCCC----------h---------------HHHHHHHHHhhcCCceEEEECcc
Q 017457 253 -GGADYCFECIGL----------T---------------SVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 253 -gg~d~vid~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+++|++|.+.|. . ...+.+.+.++.. |+++.++..
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~ 142 (252)
T PRK06077 82 YGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASV 142 (252)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcch
Confidence 378999998873 0 0133445566676 899988863
No 357
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.37 E-value=0.55 Score=34.85 Aligned_cols=85 Identities=19% Similarity=0.297 Sum_probs=55.3
Q ss_pred eEEEEcCChHHHHHHHHHHHcC---CCeEEEE-cCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 186 TVAIFGLGAVGLAVAEGARLNR---ASKIIGV-DINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g---~~~Vi~~-~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
+|.|+|+|.+|.+.+.-....| . +|+.+ .+++++.+.+. +++..... .+..+.++ ..|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~-------~~~~~~~~-----~advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA-------DDNEEAAQ-----EADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES-------EEHHHHHH-----HTSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc-------CChHHhhc-----cCCEEEE
Confidence 4778899999999998888888 6 78844 89999888764 45543221 12333333 4799999
Q ss_pred CCCChHHHHHHHHHh---hcCCceEEEE
Q 017457 261 CIGLTSVMNDAFNSS---REGWGKTVIL 285 (371)
Q Consensus 261 ~~g~~~~~~~~~~~l---~~~~G~~v~~ 285 (371)
|+.... +...++.+ .++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 998766 55555444 343 455554
No 358
>PLN03139 formate dehydrogenase; Provisional
Probab=95.36 E-value=0.13 Score=48.86 Aligned_cols=89 Identities=17% Similarity=0.146 Sum_probs=57.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.|++|.|+|.|.+|...++.++..|. +|++.+++....+...+.|+..+ .++.+.+. ..|+|+.+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~sDvV~l~l 263 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP-----KCDVVVINT 263 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh-----hCCEEEEeC
Confidence 67899999999999999999999999 89999877544444444453211 12222221 367777665
Q ss_pred CChHHH-----HHHHHHhhcCCceEEEEC
Q 017457 263 GLTSVM-----NDAFNSSREGWGKTVILG 286 (371)
Q Consensus 263 g~~~~~-----~~~~~~l~~~~G~~v~~g 286 (371)
+..... ...+..|+++ ..+|.++
T Consensus 264 Plt~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 264 PLTEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred CCCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 532211 2455666665 6666665
No 359
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.35 E-value=0.17 Score=47.41 Aligned_cols=36 Identities=31% Similarity=0.251 Sum_probs=31.4
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
.+.+|+|+|+|++|..++..+-..|..++++++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 346799999999999999999999998899898753
No 360
>PRK06398 aldose dehydrogenase; Validated
Probab=95.35 E-value=0.055 Score=48.52 Aligned_cols=74 Identities=16% Similarity=0.266 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD-FINPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
+|+++||+|+ +++|.+.+..+...|+ +|+++++++++.. .... ..|-.+ ..+..+.+.+... +.+|++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~--~~~i~~~~~~~~~~~~~id~l 76 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN--KEQVIKGIDYVISKYGRIDIL 76 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999998 9999999999989999 8999887764422 1111 123222 1223333333222 368999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+++.|.
T Consensus 77 i~~Ag~ 82 (258)
T PRK06398 77 VNNAGI 82 (258)
T ss_pred EECCCC
Confidence 998763
No 361
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.34 E-value=0.12 Score=45.56 Aligned_cols=81 Identities=17% Similarity=0.268 Sum_probs=50.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
.+++++|+|+ |++|...+..+...|+ +|+++++++++.+.+ +..+.. .++..+-.+..+..+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999998 9999999988888999 899999887765443 222322 1222221011223333333221 37
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|++.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 8999998764
No 362
>PRK06484 short chain dehydrogenase; Validated
Probab=95.33 E-value=0.088 Score=52.45 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=53.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcce---EEcCCCCCCccHHHHHHHhhC--CCc
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITD---FINPATCGDKTVSQVIKEMTD--GGA 255 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~---v~~~~~~~~~~~~~~i~~~~~--gg~ 255 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+ ++++... ..|-.+ .++..+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999998 9999999999989999 999999888876654 3455432 223222 1233333333322 379
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|+++++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998764
No 363
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.32 E-value=0.12 Score=45.26 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=48.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceE-EcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDF-INPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
+++|+|+ |++|.+.++.+...|+ +|+.+++++++.+.+ ++++...+ .|-.+ ..+..+.+.+. .+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence 5899988 9999999998888899 899999888776654 33444322 23222 12222222222 23689999875
Q ss_pred C
Q 017457 263 G 263 (371)
Q Consensus 263 g 263 (371)
|
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 4
No 364
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.28 E-value=0.13 Score=44.20 Aligned_cols=99 Identities=12% Similarity=0.193 Sum_probs=59.5
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----CcceEEcCCCCCCccHHHHHHHhh
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GITDFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~~v~~~~~~~~~~~~~~i~~~~ 251 (371)
.......++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++. +.. +.... .+... ..+
T Consensus 23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~--~~~- 91 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA--AAL- 91 (195)
T ss_pred HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh--ccc-
Confidence 3344455667899998865 666767776 477 999999998877765442 322 11111 11110 011
Q ss_pred CCCcCEEEECCC-----C---hHHHHHHHHHhhcCCceEEEEC
Q 017457 252 DGGADYCFECIG-----L---TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 252 ~gg~d~vid~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.+.+|+|+.+.. . ...++.+.+.|+++ |.++.+.
T Consensus 92 ~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 92 NEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred cCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 237999975421 1 23477888899998 9855543
No 365
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.28 E-value=0.27 Score=39.77 Aligned_cols=32 Identities=28% Similarity=0.434 Sum_probs=28.6
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
+|+|+|+|++|...+..+...|.++++.++..
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999889998754
No 366
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.27 E-value=0.12 Score=46.21 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=48.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~ 257 (371)
.++++||+|+ |++|.+.++.+...|+ +|+++.+ +++..+.+++.+...+ .|-.+ .++..+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4689999998 9999999988888899 7777654 3344444444343222 23222 1223333333222 37899
Q ss_pred EEECCCC
Q 017457 258 CFECIGL 264 (371)
Q Consensus 258 vid~~g~ 264 (371)
++++.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998864
No 367
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.27 E-value=0.17 Score=44.08 Aligned_cols=102 Identities=16% Similarity=0.181 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhCcceEE------cC-CCCCCccHHHHHHHhh--
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFGITDFI------NP-ATCGDKTVSQVIKEMT-- 251 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lga~~v~------~~-~~~~~~~~~~~i~~~~-- 251 (371)
.++.+||+.|+|. |.-++.+|. .|. .|++++.++...+.+ .+.+..... .. ......-....+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5778999999876 777777775 799 999999999988874 223321000 00 0000000000111111
Q ss_pred -CCCcCEEEECCCC--------hHHHHHHHHHhhcCCceEEEECc
Q 017457 252 -DGGADYCFECIGL--------TSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 252 -~gg~d~vid~~g~--------~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
.+.+|.++|+..- ...++.+.+.|+++ |+++..+.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1268999996531 23478899999998 98666654
No 368
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.26 E-value=0.19 Score=43.98 Aligned_cols=97 Identities=18% Similarity=0.208 Sum_probs=64.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
-+|.+||=+|+|+ |+++..+|+ +|+ +|++++-+++..+.++.-.... -+++.. ...+.+... ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 4789999999866 676666665 568 9999999999888876422111 144544 222222221 13899998
Q ss_pred E-----CCCChH-HHHHHHHHhhcCCceEEEECc
Q 017457 260 E-----CIGLTS-VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 260 d-----~~g~~~-~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+ .+.++. .+..+.+.++|+ |.++....
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~STi 162 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLSTI 162 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEecc
Confidence 5 455544 367899999997 88776543
No 369
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.25 E-value=0.14 Score=45.39 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=52.2
Q ss_pred CCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc--eEE--cCCCCCCccHHHHHHHh
Q 017457 180 GVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT--DFI--NPATCGDKTVSQVIKEM 250 (371)
Q Consensus 180 ~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~--~v~--~~~~~~~~~~~~~i~~~ 250 (371)
...+++++||+|+ |++|...++.+...|+ +|++++++.++.+.+ ++.+.. .++ |....+..++.+.+..+
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 3567899999998 9999998888888899 899999887664433 223321 122 22110112233333332
Q ss_pred hC--CCcCEEEECCCC
Q 017457 251 TD--GGADYCFECIGL 264 (371)
Q Consensus 251 ~~--gg~d~vid~~g~ 264 (371)
.. +.+|.++.+.+.
T Consensus 87 ~~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 87 EEQFGRLDGVLHNAGL 102 (247)
T ss_pred HHHhCCCCEEEECCcc
Confidence 22 268999987763
No 370
>PRK07340 ornithine cyclodeaminase; Validated
Probab=95.24 E-value=0.13 Score=47.50 Aligned_cols=103 Identities=11% Similarity=-0.005 Sum_probs=67.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHH-HHhCcc--eEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIG-KKFGIT--DFINPATCGDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~-~~lga~--~v~~~~~~~~~~~~~~i~~~~~gg~d~ 257 (371)
...++++|+|+|..|.+.+..+. ..+.++|.+..++.++.+.+ .++... .+. . .+..+.+. ++|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence 45679999999999999888876 46877899999998876654 334321 111 1 12333332 7999
Q ss_pred EEECCCChHHHHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457 258 CFECIGLTSVMNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299 (371)
Q Consensus 258 vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 299 (371)
|+.|+++..-+-..+ ++++ -++..+|.... ...+++..
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p-~~~El~~~ 229 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP-DMAELAPR 229 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCCC-CcccCCHH
Confidence 999988655222233 6786 78888887433 34455544
No 371
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.23 E-value=0.22 Score=43.92 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=58.9
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-------------------H----HHHHHHhCcc-eEEcCCCCC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-------------------K----FEIGKKFGIT-DFINPATCG 239 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-------------------~----~~~~~~lga~-~v~~~~~~~ 239 (371)
..+|+|+|.|++|..++..+-..|..+++.++...- | .++++++..+ .+.....
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~-- 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE-- 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence 467999999999999999999999999999985321 1 1122233322 1211111
Q ss_pred CccH-HHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCc-eEEEEC
Q 017457 240 DKTV-SQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWG-KTVILG 286 (371)
Q Consensus 240 ~~~~-~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G-~~v~~g 286 (371)
.+ .+...++....+|+|+||+.+......+.+..... + .++..+
T Consensus 89 --~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~-~ip~I~s~ 134 (231)
T cd00755 89 --FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR-KIPVISSM 134 (231)
T ss_pred --ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh-CCCEEEEe
Confidence 11 12233343347999999999877444444544444 4 455444
No 372
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.23 E-value=0.17 Score=47.34 Aligned_cols=35 Identities=34% Similarity=0.300 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
...+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 34679999999999999999999999999999875
No 373
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.22 E-value=0.13 Score=45.77 Aligned_cols=76 Identities=14% Similarity=0.210 Sum_probs=50.3
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hCcce-EE--cCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FGITD-FI--NPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lga~~-v~--~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
+++|+|+ |++|.+.+..+...|+ +|+++++++++.+.+.. ++.+. .+ |-.+ ..++.+.+.+... +++|++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 6899998 9999999999888999 89999998887766543 34321 22 2222 1223333333222 378999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+.+.|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 988763
No 374
>PRK08317 hypothetical protein; Provisional
Probab=95.21 E-value=0.24 Score=43.44 Aligned_cols=102 Identities=22% Similarity=0.344 Sum_probs=67.9
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHh----Cc-ceEEcCCCCCCccHHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKF----GI-TDFINPATCGDKTVSQVIK 248 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~l----ga-~~v~~~~~~~~~~~~~~i~ 248 (371)
+.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..+...+. ..+
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 34556788999999999976 888888888763 23899999999888877664 11 11221111 111
Q ss_pred HhhCCCcCEEEECC-----CC-hHHHHHHHHHhhcCCceEEEEC
Q 017457 249 EMTDGGADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 249 ~~~~gg~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.+..+.+|+|+... .+ ...+..+.+.|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 12233789887431 22 23578999999998 9988765
No 375
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.21 E-value=0.1 Score=53.58 Aligned_cols=76 Identities=29% Similarity=0.328 Sum_probs=52.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------HHHHHHHhCcceEEcCCCCCCc
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE---------------------KFEIGKKFGITDFINPATCGDK 241 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~---------------------~~~~~~~lga~~v~~~~~~~~~ 241 (371)
.+++|+|+|+|+.|++++..+...|+ +|+++++.+. ..+.++++|++...+..-..+-
T Consensus 326 ~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~i 404 (654)
T PRK12769 326 SDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKDI 404 (654)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCcC
Confidence 57899999999999999999999999 8999886532 3455667787544432110001
Q ss_pred cHHHHHHHhhCCCcCEEEECCCC
Q 017457 242 TVSQVIKEMTDGGADYCFECIGL 264 (371)
Q Consensus 242 ~~~~~i~~~~~gg~d~vid~~g~ 264 (371)
.. + .+. .++|.||.++|.
T Consensus 405 ~~-~---~~~-~~~DavilAtGa 422 (654)
T PRK12769 405 SL-E---SLL-EDYDAVFVGVGT 422 (654)
T ss_pred CH-H---HHH-hcCCEEEEeCCC
Confidence 11 1 111 269999988885
No 376
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.20 E-value=0.2 Score=43.63 Aligned_cols=35 Identities=23% Similarity=0.301 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
+..+|+|+|+|++|...++.+...|..+++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35679999999999999999999999889999865
No 377
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.20 E-value=0.24 Score=43.89 Aligned_cols=74 Identities=26% Similarity=0.274 Sum_probs=46.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CCcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++. ....+.. ..+ |-.+ .+.+.+.+.+... +.+|
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id 78 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD--AAAVAQVCQRLLAETGPLD 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 4689999998 9999999998888999 899998765 1222221 122 2221 1223333333222 2689
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+++++.+.
T Consensus 79 ~vi~~ag~ 86 (252)
T PRK08220 79 VLVNAAGI 86 (252)
T ss_pred EEEECCCc
Confidence 99998774
No 378
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.20 E-value=0.13 Score=45.66 Aligned_cols=78 Identities=22% Similarity=0.351 Sum_probs=49.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMT--DG 253 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~--~g 253 (371)
++++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ .+.. ..+ |..+ .+++.+.+.... .+
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcC
Confidence 468999998 9999999988888999 89999998876655543 2222 112 3222 122322222222 12
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
+.|++|.+.+.
T Consensus 78 ~~d~vi~~a~~ 88 (255)
T TIGR01963 78 GLDILVNNAGI 88 (255)
T ss_pred CCCEEEECCCC
Confidence 68999987753
No 379
>PRK08328 hypothetical protein; Provisional
Probab=95.19 E-value=0.18 Score=44.58 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~ 216 (371)
.+.+|+|+|+|++|...+..+...|.++++.++.
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~ 59 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDE 59 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3568999999999999999999999989998874
No 380
>PLN00203 glutamyl-tRNA reductase
Probab=95.18 E-value=0.15 Score=50.44 Aligned_cols=96 Identities=15% Similarity=0.216 Sum_probs=62.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-hC-cce-EEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-FG-ITD-FINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-lg-a~~-v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
.+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+.+ ++ ... +...+ +. .+.. ..+|+||
T Consensus 265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl----~~al-~~aDVVI 334 (519)
T PLN00203 265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EM----LACA-AEADVVF 334 (519)
T ss_pred CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hH----HHHH-hcCCEEE
Confidence 37899999999999999999999998789999999888776544 43 221 11111 11 1211 2689999
Q ss_pred ECCCChH--HHHHHHHHhhcC---Cc---eEEEECcc
Q 017457 260 ECIGLTS--VMNDAFNSSREG---WG---KTVILGVE 288 (371)
Q Consensus 260 d~~g~~~--~~~~~~~~l~~~---~G---~~v~~g~~ 288 (371)
.|++.+. .....++.+.+. .+ .+++++.+
T Consensus 335 sAT~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvP 371 (519)
T PLN00203 335 TSTSSETPLFLKEHVEALPPASDTVGGKRLFVDISVP 371 (519)
T ss_pred EccCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCC
Confidence 9987644 123444444321 02 47777763
No 381
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.17 E-value=0.23 Score=47.31 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=31.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
.+.+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 56789999999999999999999999899999876
No 382
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.14 E-value=0.51 Score=43.82 Aligned_cols=39 Identities=21% Similarity=0.197 Sum_probs=33.4
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIG 224 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 224 (371)
++|.|+|+|.+|...++.+...|. .|++.+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999988888888899 999999988765543
No 383
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.13 E-value=0.18 Score=44.85 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.3
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
+.+|+|+|+|++|..+++.+...|..+++.++.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4789999999999999999999999899988753
No 384
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.13 E-value=0.15 Score=45.57 Aligned_cols=100 Identities=12% Similarity=0.091 Sum_probs=60.7
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh--CcceE-EcCCCCCCccHHHHHHHhhCCCcCE
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF--GITDF-INPATCGDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l--ga~~v-~~~~~~~~~~~~~~i~~~~~gg~d~ 257 (371)
..+++|||+|+ |.+|...+..+...|+ +|+++.++.++....... ++..+ .|..+ . .+.+.+....++|+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d---~--~~~l~~~~~~~~d~ 88 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE---G--SDKLVEAIGDDSDA 88 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC---C--HHHHHHHhhcCCCE
Confidence 34679999998 9999999988888898 899888887765433221 22222 22221 1 12233322227999
Q ss_pred EEECCCChH-------------HHHHHHHHhhcC-CceEEEECc
Q 017457 258 CFECIGLTS-------------VMNDAFNSSREG-WGKTVILGV 287 (371)
Q Consensus 258 vid~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~ 287 (371)
||.+.|... ....+++.+... .++++.++.
T Consensus 89 vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS 132 (251)
T PLN00141 89 VICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSS 132 (251)
T ss_pred EEECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcc
Confidence 998876421 134455555543 157888775
No 385
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.13 E-value=0.16 Score=45.65 Aligned_cols=81 Identities=23% Similarity=0.303 Sum_probs=50.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
.++++||+|+ +++|.+.+..+...|+ +|+++++++++.+.+. +.|.+ ..+..+-.+.....+.+.+... +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5789999998 9999998888888899 8988888877655432 23432 1222111011222222222221 36
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 386
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.13 E-value=0.19 Score=44.37 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=33.3
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG 224 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~ 224 (371)
++++|+|+ |++|...+..+...|+ +|+++++++++.+.+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~ 41 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERL 41 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHH
Confidence 57999998 9999999998888899 899999988766543
No 387
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.13 E-value=0.13 Score=46.22 Aligned_cols=78 Identities=14% Similarity=0.254 Sum_probs=47.3
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hHHHHHH-Hh-Ccc-eE--EcCCCCCCccHHHHHHHhh
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP---EKFEIGK-KF-GIT-DF--INPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~---~~~~~~~-~l-ga~-~v--~~~~~~~~~~~~~~i~~~~ 251 (371)
.++++||+|+ +++|.+.++.....|+ +|+.+.++. ++.+.+. ++ +.. .. .|-.+ .++..+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4789999986 5999998888888999 888886543 3333332 23 211 12 23222 123333333332
Q ss_pred C--CCcCEEEECCC
Q 017457 252 D--GGADYCFECIG 263 (371)
Q Consensus 252 ~--gg~d~vid~~g 263 (371)
. +.+|+++++.|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 37999998876
No 388
>PRK06849 hypothetical protein; Provisional
Probab=95.12 E-value=0.68 Score=44.31 Aligned_cols=94 Identities=13% Similarity=0.024 Sum_probs=59.8
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcce--EEcCCCCCCccHHHHHHHhhCC-CcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITD--FINPATCGDKTVSQVIKEMTDG-GADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~--v~~~~~~~~~~~~~~i~~~~~g-g~d~v 258 (371)
..++|||+|+ .+.|+..+..++..|. +|++++.++.......+ .++. .+..-..+.+.+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~-~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSR-AVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHH-hhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4689999998 6789999999999999 99999987654432221 2222 2322221224567777777666 89999
Q ss_pred EECCCChHHHHHHHHHhhcC
Q 017457 259 FECIGLTSVMNDAFNSSREG 278 (371)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~ 278 (371)
+-+...........+.+.+.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred EECChHHHhHHhhhhhhcCC
Confidence 97765433233334445543
No 389
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.12 E-value=0.23 Score=43.70 Aligned_cols=81 Identities=21% Similarity=0.253 Sum_probs=58.0
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH--hCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK--FGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 263 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~--lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g 263 (371)
.++|.|+|.+|...++.+...|. .|++++.++++.+...+ ++. +++..+. .-.+.++++--..+|+++-+++
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 68899999999999999999999 89999999999887433 444 3443333 2234555553338999999888
Q ss_pred ChHHHHHHHH
Q 017457 264 LTSVMNDAFN 273 (371)
Q Consensus 264 ~~~~~~~~~~ 273 (371)
... .+..+-
T Consensus 76 ~d~-~N~i~~ 84 (225)
T COG0569 76 NDE-VNSVLA 84 (225)
T ss_pred CCH-HHHHHH
Confidence 755 343333
No 390
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.11 E-value=0.069 Score=47.49 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=65.3
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHH-HHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQ-VIK 248 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~-~i~ 248 (371)
+....++.||++|+=.|.|. |.++..++++.| -.+|+..+..+++.+.+++ .|....+.-.. .+..+ ...
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~---~Dv~~~g~~ 107 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH---RDVCEEGFD 107 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE---S-GGCG--S
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe---cceeccccc
Confidence 34567899999999887765 677777887765 3489999999988877654 45432111111 11111 110
Q ss_pred HhhCCCcCEEE-ECCCChHHHHHHHHHh-hcCCceEEEECc
Q 017457 249 EMTDGGADYCF-ECIGLTSVMNDAFNSS-REGWGKTVILGV 287 (371)
Q Consensus 249 ~~~~gg~d~vi-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 287 (371)
+-....+|.|| |--.--..+..+.+.| +++ |+++.|.-
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 00112689886 7655445689999999 887 99999863
No 391
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.11 E-value=0.14 Score=46.07 Aligned_cols=80 Identities=16% Similarity=0.288 Sum_probs=47.3
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhHHHHH-HHhCcceEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDIN---PEKFEIG-KKFGITDFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~---~~~~~~~-~~lga~~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ +++|.+.++.+...|+ +|+.+.+. .++.+.+ ++++....+..+-.+.++..+.+..... +
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence 5789999984 5899998888888999 88887543 3333333 2344322222111112333333333322 3
Q ss_pred CcCEEEECCC
Q 017457 254 GADYCFECIG 263 (371)
Q Consensus 254 g~d~vid~~g 263 (371)
.+|+++++.|
T Consensus 84 ~iD~lvnnAG 93 (260)
T PRK06997 84 GLDGLVHSIG 93 (260)
T ss_pred CCcEEEEccc
Confidence 7999998876
No 392
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.11 E-value=0.21 Score=44.52 Aligned_cols=34 Identities=24% Similarity=0.337 Sum_probs=30.3
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~ 216 (371)
...+|+|+|+|++|..++..+...|..++++++.
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~ 64 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDF 64 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 3578999999999999999999999989988875
No 393
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.17 Score=46.14 Aligned_cols=36 Identities=28% Similarity=0.313 Sum_probs=30.3
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
-+++++||+|+ +++|.+.++.+...|+ +|++++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCc
Confidence 46889999998 9999998888888999 888887553
No 394
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.09 E-value=0.15 Score=47.18 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=30.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
.++++||+|+ +++|.+.++.+...|+ +|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 5789999998 8999999998888999 89988876
No 395
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.08 E-value=0.071 Score=45.97 Aligned_cols=35 Identities=40% Similarity=0.459 Sum_probs=30.9
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
...+|+|.|+|++|...++.+...|..+++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 34679999999999999999999999889999876
No 396
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.16 Score=45.92 Aligned_cols=81 Identities=14% Similarity=-0.019 Sum_probs=49.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEEcCCCCCCccHHHHHHHhh--CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFINPATCGDKTVSQVIKEMT--DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~~~~~~~~~~~~~~i~~~~--~gg 254 (371)
+.+++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+. ..+.. .++..+-.+.++..+.+.+.. -++
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4568999998 9999999988888899 8988888776544332 23432 122222101122222222221 136
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|++.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999988874
No 397
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.06 E-value=0.33 Score=42.73 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=29.7
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDI 216 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~ 216 (371)
..+|+|.|+|++|...+..+..+|..+++.++.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 578999999999999999999999989988864
No 398
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.16 Score=45.98 Aligned_cols=99 Identities=19% Similarity=0.303 Sum_probs=59.5
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhh-CCCc
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMT-DGGA 255 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~-~gg~ 255 (371)
++++||+|+|++|.+.+..+. .|+ +|+.+++++++.+.+. ..|.+ .++ |-.+ .+...+.+.+.. -+++
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~i 77 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPV 77 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCC
Confidence 467899999999999888774 798 8999998877654432 22322 122 3222 122333333221 1379
Q ss_pred CEEEECCCChH------------------HHHHHHHHhhcCCceEEEECc
Q 017457 256 DYCFECIGLTS------------------VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 256 d~vid~~g~~~------------------~~~~~~~~l~~~~G~~v~~g~ 287 (371)
|+++++.|... .++.+.+.+..+ |+++.++.
T Consensus 78 d~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~-g~iv~isS 126 (275)
T PRK06940 78 TGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPG-GAGVVIAS 126 (275)
T ss_pred CEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhC-CCEEEEEe
Confidence 99999887421 134445556665 77666654
No 399
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.01 E-value=0.1 Score=45.80 Aligned_cols=74 Identities=16% Similarity=0.185 Sum_probs=48.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhCC-CcCEEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTDG-GADYCF 259 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~g-g~d~vi 259 (371)
+++++||+|+ |++|...+..+...|+ +|+++.++.++ ..... ...|-.+ .+...+.+.+.... +.|+++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEE
Confidence 3678999998 9999999998888999 89999887654 11211 1123222 12333334443333 689999
Q ss_pred ECCCC
Q 017457 260 ECIGL 264 (371)
Q Consensus 260 d~~g~ 264 (371)
++.+.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 98774
No 400
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.98 E-value=0.21 Score=46.09 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=47.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHH----HHHhCcceEEcCCCCCCccHHHHHHHh-h-CCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGITDFINPATCGDKTVSQVIKEM-T-DGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~----~~~lga~~v~~~~~~~~~~~~~~i~~~-~-~gg 254 (371)
+++++||+|+ +++|.+.+..+...|+ +|++.++.. ++.+. ++..|.......-+..+.+-.+.+.+. . -+.
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 5789999998 9999998888888899 888887542 23222 223343221111111112222222211 1 247
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|++.|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 401
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=94.94 E-value=0.2 Score=43.38 Aligned_cols=94 Identities=17% Similarity=0.118 Sum_probs=61.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
+|++|||+|+|.+|.-=+.+....|+ +|+++.... .....+.+.+-...+. +. +.. ..+ . ++++||-+
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~~-----~~~--~~~-~-~~~lviaA 79 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-RE-----FDA--EDL-D-DAFLVIAA 79 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-cc-----cCh--hhh-c-CceEEEEe
Confidence 57899999999999999999999999 888887655 3333333222211111 11 111 011 1 48999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
++++..-+.+.+..... +.++.....
T Consensus 80 t~d~~ln~~i~~~a~~~-~i~vNv~D~ 105 (210)
T COG1648 80 TDDEELNERIAKAARER-RILVNVVDD 105 (210)
T ss_pred CCCHHHHHHHHHHHHHh-CCceeccCC
Confidence 99988445566666665 877777653
No 402
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.93 E-value=0.22 Score=47.04 Aligned_cols=59 Identities=27% Similarity=0.188 Sum_probs=42.8
Q ss_pred cchhhccccchhhhHHHHHHHcCC-CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457 158 LGIACLLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 219 (371)
Q Consensus 158 ~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~ 219 (371)
..+|.+..+.+.+- .+ ....+. -+|.+|.|.|.|.+|..+++.+..+|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~a-~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-EA-LKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-HH-HHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 44555555444433 22 333343 589999999999999999999988899 8888876665
No 403
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=94.91 E-value=0.38 Score=43.70 Aligned_cols=99 Identities=17% Similarity=0.203 Sum_probs=64.5
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-CcceE-E-cCCCC-CCccHHHHHHHhhCCCcCEEE-
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GITDF-I-NPATC-GDKTVSQVIKEMTDGGADYCF- 259 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga~~v-~-~~~~~-~~~~~~~~i~~~~~gg~d~vi- 259 (371)
++|||+|+|. |-.+=.++|.....++++++.+++=.+.+++. +.... . |.+-. -..+-.+.+++... ++|++|
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 6999998755 45555778888777999999999888888762 21110 0 11000 01234445554433 899997
Q ss_pred ECCCC---------hHHHHHHHHHhhcCCceEEEEC
Q 017457 260 ECIGL---------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 260 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|++.. ..-++.+-++|+++ |.++.-+
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~ 190 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA 190 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence 66554 34578999999997 9887663
No 404
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.89 E-value=0.095 Score=42.75 Aligned_cols=94 Identities=20% Similarity=0.190 Sum_probs=55.9
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC---CCccHHHHHHHhhCCCcCEEEECCC
Q 017457 187 VAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDGGADYCFECIG 263 (371)
Q Consensus 187 VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~gg~d~vid~~g 263 (371)
|+|+|+|.+|.+.+..++..|. .|..+.+.+ +.+.+++.|........+. ........ ....+.+|++|-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888877999 899999887 7777776554211111000 00000000 111237999999987
Q ss_pred ChHHHHHHHHHhhc----CCceEEEEC
Q 017457 264 LTSVMNDAFNSSRE----GWGKTVILG 286 (371)
Q Consensus 264 ~~~~~~~~~~~l~~----~~G~~v~~g 286 (371)
... ...+++.+++ + ..++.+-
T Consensus 77 a~~-~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AYQ-LEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GGG-HHHHHHHHCTGEETT-EEEEEES
T ss_pred ccc-hHHHHHHHhhccCCC-cEEEEEe
Confidence 766 4445554444 3 4565553
No 405
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=94.88 E-value=1.2 Score=40.69 Aligned_cols=61 Identities=21% Similarity=0.235 Sum_probs=44.6
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhHHHHHHHhCcceEEcCC
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVD--INPEKFEIGKKFGITDFINPA 236 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~--~~~~~~~~~~~lga~~v~~~~ 236 (371)
.....+++|.+|+=--+|.+|.+.+.+|+++|++-++++. -+.+|++.++.+|+.-++...
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3456699999443333499999999999999994444443 366888999999998776554
No 406
>PRK06523 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.13 Score=46.07 Aligned_cols=37 Identities=14% Similarity=0.164 Sum_probs=32.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 220 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~ 220 (371)
+|+++||+|+ |++|...++.+...|+ +|++++++.++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~ 45 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPD 45 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhh
Confidence 5789999998 9999999988888899 89999887543
No 407
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.82 E-value=0.36 Score=43.31 Aligned_cols=97 Identities=15% Similarity=0.165 Sum_probs=64.6
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcc-eEEcCCCCCCccHHHHHHHhhC-CC
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGIT-DFINPATCGDKTVSQVIKEMTD-GG 254 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~-~v~~~~~~~~~~~~~~i~~~~~-gg 254 (371)
....+.++++||=+|+|. |..+..+++..+..+|++++.++...+.+++.-.. .++.. +.. .+.. ..
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~------d~~----~~~~~~~ 93 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA------DIA----SWQPPQA 93 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC------chh----ccCCCCC
Confidence 345567889999999865 66777888776433999999999888877664221 22221 111 1112 27
Q ss_pred cCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEE
Q 017457 255 ADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 255 ~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 285 (371)
+|+|+.... . ...++.+.+.|+++ |.++..
T Consensus 94 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 94 LDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred ccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 999985433 2 23578899999998 998775
No 408
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.81 E-value=0.17 Score=45.79 Aligned_cols=36 Identities=33% Similarity=0.380 Sum_probs=30.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPE 219 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~ 219 (371)
+++++||+|+ |++|...+..+...|+ +|++++++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccc
Confidence 5689999998 9999999988888899 8999887653
No 409
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.80 E-value=0.2 Score=44.42 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=47.9
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIG-VDINPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~-~~~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--g 253 (371)
+++++||+|+ |++|...+..+...|+ +|++ ..++.++.+.+ +..+.. .++..+-.+..+....+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999998 9999999999988999 7665 46666554332 233432 2222221111222222332221 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 68999998773
No 410
>PRK12743 oxidoreductase; Provisional
Probab=94.79 E-value=0.2 Score=44.76 Aligned_cols=80 Identities=13% Similarity=0.052 Sum_probs=47.0
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH----HHhCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG----KKFGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~----~~lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
++++||+|+ +++|...++.+...|+ +|+.+. ++.++.+.+ +..|.. +++..+-.+.+.....+.+... +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 578999998 9999999999988999 787764 344443332 334432 2222111011222222222221 26
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999988773
No 411
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.79 E-value=0.26 Score=43.88 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=68.3
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHH
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN--RASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIK 248 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~--g~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~ 248 (371)
+....+..+.++||-+|.+ +|..++.+|+++ +. +|+.++.++++.+.+++ .|...-++... .+..+.+.
T Consensus 71 L~~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~ 145 (247)
T PLN02589 71 LNMLLKLINAKNTMEIGVY-TGYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLD 145 (247)
T ss_pred HHHHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHH
Confidence 3444566777889999873 477788888876 44 89999999987776644 56332223222 34555665
Q ss_pred HhhC-----CCcCEEE-ECCCC--hHHHHHHHHHhhcCCceEEE
Q 017457 249 EMTD-----GGADYCF-ECIGL--TSVMNDAFNSSREGWGKTVI 284 (371)
Q Consensus 249 ~~~~-----gg~d~vi-d~~g~--~~~~~~~~~~l~~~~G~~v~ 284 (371)
++.. +.||.|| |+--. ...++.+++.++++ |.++.
T Consensus 146 ~l~~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 146 QMIEDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred HHHhccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 5532 4799998 55432 23467888999996 77654
No 412
>PLN02823 spermine synthase
Probab=94.77 E-value=0.3 Score=45.59 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=60.8
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-cc-eEEcCCCC--CCccHHHHHHHhhCCCcCEE
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-IT-DFINPATC--GDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a~-~v~~~~~~--~~~~~~~~i~~~~~gg~d~v 258 (371)
..++|||+|+|. |.++..+++..+..+|++++.+++-.+.+++.- .. ..++..+. -..+..+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998865 556667777776668999999998888887632 11 00100000 00223333432 33489999
Q ss_pred E-ECCC----C-------hHHHH-HHHHHhhcCCceEEEE
Q 017457 259 F-ECIG----L-------TSVMN-DAFNSSREGWGKTVIL 285 (371)
Q Consensus 259 i-d~~g----~-------~~~~~-~~~~~l~~~~G~~v~~ 285 (371)
| |... + ...++ .+.+.|+++ |.++.-
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q 219 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQ 219 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEe
Confidence 7 6422 1 12245 678899998 987654
No 413
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.76 E-value=0.24 Score=44.41 Aligned_cols=80 Identities=18% Similarity=0.158 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHH-HH----hCcc-eEEcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEKFEIG-KK----FGIT-DFINPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~-~~----lga~-~v~~~~~~~~~~~~~~i~~~~~-- 252 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+. +++++.+.+ ++ .+.. ..+..+-.+.++..+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 5789999998 9999999998888999 787775 344444332 12 2322 2222111111223333333222
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+.+|+++++.|
T Consensus 86 g~id~lv~nAg 96 (260)
T PRK08416 86 DRVDFFISNAI 96 (260)
T ss_pred CCccEEEECcc
Confidence 37899998875
No 414
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.72 E-value=0.23 Score=49.07 Aligned_cols=70 Identities=26% Similarity=0.272 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
..+++|+|+|+|.+|+.++.+++..|. +|++++..+. ..+.+++.|+........ . ....+|
T Consensus 14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~----~--------~~~~~D 80 (480)
T PRK01438 14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP----T--------LPEDTD 80 (480)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc----c--------ccCCCC
Confidence 457899999999999999999999999 8999885542 234456677765443222 1 011578
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+|+-+.|-
T Consensus 81 ~Vv~s~Gi 88 (480)
T PRK01438 81 LVVTSPGW 88 (480)
T ss_pred EEEECCCc
Confidence 88887775
No 415
>PRK05650 short chain dehydrogenase; Provisional
Probab=94.71 E-value=0.2 Score=45.13 Aligned_cols=79 Identities=19% Similarity=0.206 Sum_probs=48.2
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcce-EEcCCCCCCccHHHHHHHhhC--CCcC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGITD-FINPATCGDKTVSQVIKEMTD--GGAD 256 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~~-v~~~~~~~~~~~~~~i~~~~~--gg~d 256 (371)
+++||+|+ |++|...+..+...|+ +|++++++.++.+.+ +..+.+. ++..+-.+..+..+.+..... +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899998 9999998888888899 899999887765543 2233321 222111011222222222211 3789
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
++|++.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 416
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.70 E-value=0.22 Score=46.16 Aligned_cols=89 Identities=15% Similarity=0.196 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
-.|++|.|+|.|.+|...++.++..|. +|++.+++.++.. +...+... .++.+.+ . ..|+|+.+
T Consensus 134 l~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~~-----~~l~e~l----~-~aDvvv~~ 197 (312)
T PRK15469 134 REDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAGR-----EELSAFL----S-QTRVLINL 197 (312)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeeccc-----ccHHHHH----h-cCCEEEEC
Confidence 367899999999999999999999999 9999886543321 22111110 1222222 1 57888877
Q ss_pred CCChHHH-----HHHHHHhhcCCceEEEECc
Q 017457 262 IGLTSVM-----NDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 262 ~g~~~~~-----~~~~~~l~~~~G~~v~~g~ 287 (371)
.+..... ...++.|+++ ..+|.+|.
T Consensus 198 lPlt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 198 LPNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 6643311 3456677776 77777763
No 417
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.69 E-value=0.36 Score=41.46 Aligned_cols=35 Identities=17% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
...+|+|+|+|++|.-.+..+-..|.++++.++..
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 35789999999999999999999999889988753
No 418
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.69 E-value=0.28 Score=44.83 Aligned_cols=94 Identities=15% Similarity=0.231 Sum_probs=66.7
Q ss_pred ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
.+||+...... +.+..+ --.|++|.|+|. +.+|.-.+.++...|+ +|++..+...
T Consensus 138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 45666555554 334444 357999999998 6999999999999999 8888854321
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+..+.++ .+|+|+-++|.+..+...+ ++++ ..++++|..
T Consensus 195 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 -DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred -CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1222221 5899999999887566554 8887 899999864
No 419
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.66 E-value=0.23 Score=47.71 Aligned_cols=76 Identities=20% Similarity=0.271 Sum_probs=48.3
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGI-TDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
++++++|+|+ |++|.+.+..+...|+ +|+++++++++.+... ..+. ...+..+- .+. +.+.+.. +++|+++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd~-~~v~~~l-~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQE-AALAELL-EKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CCH-HHHHHHh-CCCCEEE
Confidence 4789999998 9999999988888899 8999988776554321 1111 11221111 121 2333333 3799999
Q ss_pred ECCCC
Q 017457 260 ECIGL 264 (371)
Q Consensus 260 d~~g~ 264 (371)
++.|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 87763
No 420
>PRK13243 glyoxylate reductase; Reviewed
Probab=94.64 E-value=0.28 Score=45.86 Aligned_cols=87 Identities=20% Similarity=0.273 Sum_probs=54.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.|++|.|+|.|.+|...++.++..|. +|++.+++.... .....+... .++.+.+. ..|+|+-++
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~---------~~l~ell~-----~aDiV~l~l 212 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY---------RPLEELLR-----ESDFVSLHV 212 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe---------cCHHHHHh-----hCCEEEEeC
Confidence 57899999999999999999999999 899998765432 222333311 12222221 357776665
Q ss_pred CChHH-----HHHHHHHhhcCCceEEEEC
Q 017457 263 GLTSV-----MNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 263 g~~~~-----~~~~~~~l~~~~G~~v~~g 286 (371)
+.... -...+..|+++ ..++.++
T Consensus 213 P~t~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 213 PLTKETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred CCChHHhhccCHHHHhcCCCC-eEEEECc
Confidence 53221 13455566665 6666655
No 421
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.63 E-value=0.41 Score=42.89 Aligned_cols=97 Identities=18% Similarity=0.159 Sum_probs=66.6
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhh-C
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLN-RASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMT-D 252 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~-g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~-~ 252 (371)
+.......++++||=+|+|. |..+..+++.. +. +|++++.++.-.+.+++.+.+.+. .+. .++. .
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-------~d~----~~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-------GDV----RDWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-------cCh----hhCCCC
Confidence 33445667889999999866 66777787765 56 899999999888888776544222 121 1222 2
Q ss_pred CCcCEEEECCC-----C-hHHHHHHHHHhhcCCceEEEE
Q 017457 253 GGADYCFECIG-----L-TSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 253 gg~d~vid~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 285 (371)
+.||+|+.... . ...+..+.+.|+++ |.++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 37999985332 2 33477888999998 998764
No 422
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.62 E-value=0.97 Score=34.99 Aligned_cols=87 Identities=21% Similarity=0.315 Sum_probs=59.7
Q ss_pred eEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhHHHH-HHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 186 TVAIFGLGAVGLAVAEGARLN--RASKII-GVDINPEKFEI-GKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~--g~~~Vi-~~~~~~~~~~~-~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
+|.|+|.|.+|.....-++.. +. +++ +.++++++.+. .+++|.. .+ .++.+.+.+. .+|+|+-+
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~-------~~~~~ll~~~---~~D~V~I~ 69 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VY-------TDLEELLADE---DVDAVIIA 69 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EE-------SSHHHHHHHT---TESEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-ch-------hHHHHHHHhh---cCCEEEEe
Confidence 588999999998887655554 45 444 56677776665 4567776 44 2343333322 79999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEEC
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
++.....+.+..++..+ .-+++.
T Consensus 70 tp~~~h~~~~~~~l~~g--~~v~~E 92 (120)
T PF01408_consen 70 TPPSSHAEIAKKALEAG--KHVLVE 92 (120)
T ss_dssp SSGGGHHHHHHHHHHTT--SEEEEE
T ss_pred cCCcchHHHHHHHHHcC--CEEEEE
Confidence 99887788888888874 556564
No 423
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.60 E-value=0.22 Score=48.61 Aligned_cols=71 Identities=25% Similarity=0.289 Sum_probs=48.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hHH----HHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCE
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINP-EKF----EIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~----~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~ 257 (371)
.+++|+|+|+|.+|+.++..+...|+ .|++++.+. +.. +.+.+.|...+. .+. .+ . . .+++|+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~~~~-~~~---~~---~---~-~~~~d~ 71 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIELVL-GEY---PE---E---F-LEGVDL 71 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCEEEe-CCc---ch---h---H-hhcCCE
Confidence 47899999998899999999999999 899999864 222 334445654322 221 11 1 1 126899
Q ss_pred EEECCCCh
Q 017457 258 CFECIGLT 265 (371)
Q Consensus 258 vid~~g~~ 265 (371)
|+.++|..
T Consensus 72 vv~~~g~~ 79 (450)
T PRK14106 72 VVVSPGVP 79 (450)
T ss_pred EEECCCCC
Confidence 99988853
No 424
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.59 E-value=0.25 Score=43.53 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=47.7
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHHHH----hCcc-eEEcCCCCCCccHHHHHHHhhC--CC
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIGKK----FGIT-DFINPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~~~----lga~-~v~~~~~~~~~~~~~~i~~~~~--gg 254 (371)
++++||+|+ |++|...+..+...|+ +|+++ .++.++.+.+.. .+.. .++..+-.+...+.+.+..... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 578999998 9999998888777899 88888 877766544322 2221 1222111011222222222211 26
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 8999988764
No 425
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.58 E-value=0.2 Score=44.98 Aligned_cols=104 Identities=15% Similarity=0.198 Sum_probs=60.2
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh------hHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhC
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP------EKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~------~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
.++++||+|+ +++|.+.+..+...|+ +|+++.++. +..+.+.+.+. ...+.-+-.+.++..+.+.+...
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 5789999996 4999998888888999 887775332 22333322221 12221111111233333333322
Q ss_pred --CCcCEEEECCCCh-------H----------------------HHHHHHHHhhcCCceEEEECcc
Q 017457 253 --GGADYCFECIGLT-------S----------------------VMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 253 --gg~d~vid~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
+.+|+++++.|.. . ..+.+++.+..+ |+++.++..
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 3799999987731 0 134566677776 898888753
No 426
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.58 E-value=0.25 Score=44.34 Aligned_cols=94 Identities=21% Similarity=0.237 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++. |.. .++. .+.. .+.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~------~d~~-~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH------CAAQ-DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE------cCHH-HHhhhcCCC
Confidence 4567888888865 6777778775 77 999999999888877652 321 1221 1221 122223347
Q ss_pred cCEEEECC-----CC-hHHHHHHHHHhhcCCceEEEEC
Q 017457 255 ADYCFECI-----GL-TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 255 ~d~vid~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 286 (371)
+|+|+... .. ...+..+.+.|+++ |.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 99998432 22 23478899999998 9987653
No 427
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.56 E-value=0.42 Score=43.83 Aligned_cols=57 Identities=23% Similarity=0.155 Sum_probs=47.1
Q ss_pred HHcCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---ChhHHHHHHHhCcceEEc
Q 017457 177 KVAGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDI---NPEKFEIGKKFGITDFIN 234 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~---~~~~~~~~~~lga~~v~~ 234 (371)
..+.+.||+++||-.. |.+|...+.++...|+ ++|++.+ +.||+..++.+|+.-+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 3467999999999986 9999999999999999 7888765 447888889999876653
No 428
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.55 E-value=0.27 Score=45.59 Aligned_cols=77 Identities=19% Similarity=0.187 Sum_probs=48.9
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHH-HHhCc---c-eE--EcCCCCCCccHHHHHHHhh--C
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNR-ASKIIGVDINPEKFEIG-KKFGI---T-DF--INPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~-~~lga---~-~v--~~~~~~~~~~~~~~i~~~~--~ 252 (371)
++++||+|+ +++|.+.+..+...| + +|+.+++++++.+.+ +++.. . .+ .|-.+ ..+..+.+.+.. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 678999998 999999888877889 7 899999888766544 23321 1 12 23222 122222233322 2
Q ss_pred CCcCEEEECCC
Q 017457 253 GGADYCFECIG 263 (371)
Q Consensus 253 gg~d~vid~~g 263 (371)
+++|++|++.|
T Consensus 80 ~~iD~lI~nAG 90 (314)
T TIGR01289 80 RPLDALVCNAA 90 (314)
T ss_pred CCCCEEEECCC
Confidence 37999998876
No 429
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.53 E-value=0.2 Score=51.65 Aligned_cols=81 Identities=19% Similarity=0.263 Sum_probs=51.2
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH-h----Ccc--eEEcCCCCCCccHHHHHHHhh--C
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK-F----GIT--DFINPATCGDKTVSQVIKEMT--D 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~-l----ga~--~v~~~~~~~~~~~~~~i~~~~--~ 252 (371)
.++++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+.+ + +.. ..+..+-.+..+..+.+.+.. -
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4789999998 9999999988888999 99999988876654422 1 221 122111101122323333322 2
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+++|+++++.|.
T Consensus 492 g~iDilV~nAG~ 503 (676)
T TIGR02632 492 GGVDIVVNNAGI 503 (676)
T ss_pred CCCcEEEECCCC
Confidence 379999998874
No 430
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=94.49 E-value=0.16 Score=50.66 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=58.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
.++++||+|+|++|.+++..+...|+ +|+++.++.++.+.+. .++.. ++...+ + .+......|+++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~~-----~----~~~~~~~~diiINt 446 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLAD-----L----ENFHPEEGMILANT 446 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHhH-----h----hhhccccCeEEEec
Confidence 46899999999999999999999999 9999999887766654 34422 222111 1 11111257899988
Q ss_pred CCChHH-----HHHHHHHhhcCCceEEEECc
Q 017457 262 IGLTSV-----MNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 262 ~g~~~~-----~~~~~~~l~~~~G~~v~~g~ 287 (371)
++-... .......+++. +.++++-.
T Consensus 447 T~vGm~~~~~~~pl~~~~l~~~-~~v~D~vY 476 (529)
T PLN02520 447 TSVGMQPNVDETPISKHALKHY-SLVFDAVY 476 (529)
T ss_pred ccCCCCCCCCCCcccHhhCCCC-CEEEEecc
Confidence 763320 01123346665 66666654
No 431
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.48 E-value=0.7 Score=36.62 Aligned_cols=92 Identities=17% Similarity=0.302 Sum_probs=56.5
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCC--hhHH-HHHHHhCcceEEcCCCCCCccHHHHH-------------
Q 017457 187 VAIFGL-GAVGLAVAEGARLNR--ASKIIGVDIN--PEKF-EIGKKFGITDFINPATCGDKTVSQVI------------- 247 (371)
Q Consensus 187 VLI~G~-g~~G~~ai~la~~~g--~~~Vi~~~~~--~~~~-~~~~~lga~~v~~~~~~~~~~~~~~i------------- 247 (371)
|.|+|+ |.+|..++...+... + +|++..-. -+++ +.++++.+..+.-.++ ...+.+
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~----~~~~~l~~~~~~~~~~~~v 75 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE----EAYEELKKALPSKGPGIEV 75 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH----HHHHHHHHHHHHTTSSSEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH----HHHHHHHHHhhhcCCCCEE
Confidence 578898 999999999999876 5 66666533 2332 3356677776654443 222222
Q ss_pred -------HHhhC-CCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 248 -------KEMTD-GGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 248 -------~~~~~-gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.++.. ..+|+|++++.+...+...+..++.+ +-+.+
T Consensus 76 ~~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g--k~iaL 119 (129)
T PF02670_consen 76 LSGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG--KDIAL 119 (129)
T ss_dssp EESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT--SEEEE
T ss_pred EeChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC--CeEEE
Confidence 23222 27899998888877788888888874 44444
No 432
>PLN03075 nicotianamine synthase; Provisional
Probab=94.47 E-value=0.31 Score=44.46 Aligned_cols=99 Identities=18% Similarity=0.200 Sum_probs=64.8
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHHhC-----cceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
.++++|+-+|+|+.++.++.+++... -.+++.++.+++..+.+++.- ...-+.... .+..+. .. ..++|
T Consensus 122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~-~~-~l~~F 196 (296)
T PLN03075 122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDV-TE-SLKEY 196 (296)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhc-cc-ccCCc
Confidence 37799999999999998888886543 238999999999888876632 111111111 222211 00 12389
Q ss_pred CEEEECC-------CChHHHHHHHHHhhcCCceEEEEC
Q 017457 256 DYCFECI-------GLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 256 d~vid~~-------g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|+||-.+ .-...+..+.+.|+++ |.++.-.
T Consensus 197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~ 233 (296)
T PLN03075 197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS 233 (296)
T ss_pred CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence 9998553 1233578999999997 8877654
No 433
>PRK01581 speE spermidine synthase; Validated
Probab=94.45 E-value=0.59 Score=43.88 Aligned_cols=97 Identities=15% Similarity=0.132 Sum_probs=63.4
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-----------cc--eEEcCCCCCCccHHHHH
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----------IT--DFINPATCGDKTVSQVI 247 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----------a~--~v~~~~~~~~~~~~~~i 247 (371)
....++|||+|+|. |.++..+++..+..+|++++.+++-.+.++++. .. .++. .+..+.+
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi------~Da~~fL 220 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHV------CDAKEFL 220 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEE------CcHHHHH
Confidence 45567999999764 666777777666569999999999888887521 01 1111 2333334
Q ss_pred HHhhCCCcCEEE-ECCCC----------hHHHHHHHHHhhcCCceEEEEC
Q 017457 248 KEMTDGGADYCF-ECIGL----------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 248 ~~~~~gg~d~vi-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.+ +.+.+|+|| |.... ...+..+.+.|+++ |.++.-.
T Consensus 221 ~~-~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 221 SS-PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred Hh-cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 33 334899998 53221 12467889999998 9987664
No 434
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.45 E-value=0.2 Score=47.11 Aligned_cols=77 Identities=12% Similarity=0.078 Sum_probs=48.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH-HHhC--cc-eEEcCCCCCCccHHHHHHHhhCC-CcC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG-KKFG--IT-DFINPATCGDKTVSQVIKEMTDG-GAD 256 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~-~~lg--a~-~v~~~~~~~~~~~~~~i~~~~~g-g~d 256 (371)
+|++|||+|+ |.+|...+..+...|. +|++++++....... ..++ .. ..+..+- .+ .+.+.++... ++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence 5789999997 9999999999998999 899888766543221 1222 11 1121111 12 2234444434 689
Q ss_pred EEEECCCC
Q 017457 257 YCFECIGL 264 (371)
Q Consensus 257 ~vid~~g~ 264 (371)
+||++.+.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99998873
No 435
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.45 E-value=0.13 Score=46.30 Aligned_cols=75 Identities=19% Similarity=0.273 Sum_probs=47.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCCCCCccHHHHHHHhhC--CCcCEE
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPATCGDKTVSQVIKEMTD--GGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~~~~~~~~~~i~~~~~--gg~d~v 258 (371)
.++++||+|+ |++|.+.+..+...|+ +|+.++++.++.+. .....+ .|-.+ .++..+.+.+... +.+|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999997 9999999999888999 89988877654321 111111 23222 1223333333222 378999
Q ss_pred EECCC
Q 017457 259 FECIG 263 (371)
Q Consensus 259 id~~g 263 (371)
+++.|
T Consensus 82 i~~Ag 86 (266)
T PRK06171 82 VNNAG 86 (266)
T ss_pred EECCc
Confidence 99877
No 436
>PLN02244 tocopherol O-methyltransferase
Probab=94.45 E-value=0.14 Score=48.07 Aligned_cols=94 Identities=17% Similarity=0.263 Sum_probs=62.1
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh----Ccc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF----GIT---DFINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l----ga~---~v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
+++++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++. |.. .++..+- .++ .+..+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 6788999999865 6677788887788 999999999877665542 321 1111111 110 112337
Q ss_pred cCEEEECCCC------hHHHHHHHHHhhcCCceEEEEC
Q 017457 255 ADYCFECIGL------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 255 ~d~vid~~g~------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
||+|+..... ...++.+.+.|+++ |+++...
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9999853321 23478899999998 9988764
No 437
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.44 E-value=0.33 Score=40.83 Aligned_cols=33 Identities=24% Similarity=0.268 Sum_probs=29.0
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
+|+|+|+|++|...++.+...|..+++.++...
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999998889998899998654
No 438
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.42 E-value=0.32 Score=39.73 Aligned_cols=96 Identities=19% Similarity=0.245 Sum_probs=62.5
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCC---CCccHHHHHHHhhCC-CcCEEE
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATC---GDKTVSQVIKEMTDG-GADYCF 259 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~---~~~~~~~~i~~~~~g-g~d~vi 259 (371)
.+|+|+|+ |.+|.+.++.-|+.++ -|.-++-+++.. ..+..+++.... -++...+++.+...+ ++|.||
T Consensus 4 grVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~ 77 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVF 77 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceEE
Confidence 57999998 9999999999999999 888887655432 223334443330 012233334444556 899999
Q ss_pred ECCCCh--------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457 260 ECIGLT--------------------------SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 260 d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
...|+= ...+.+-.+|+++ |-+.+.|.
T Consensus 78 CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGA 130 (236)
T KOG4022|consen 78 CVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGA 130 (236)
T ss_pred EeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeeccc
Confidence 876641 0234455678997 88887775
No 439
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=94.41 E-value=0.56 Score=44.35 Aligned_cols=98 Identities=17% Similarity=0.256 Sum_probs=62.4
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEc--CChhHHH-HHHHhCcceEEcCCCCCCccH--------------H
Q 017457 185 STVAIFGL-GAVGLAVAEGARLN--RASKIIGVD--INPEKFE-IGKKFGITDFINPATCGDKTV--------------S 244 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~--g~~~Vi~~~--~~~~~~~-~~~~lga~~v~~~~~~~~~~~--------------~ 244 (371)
++|.|+|+ |.+|..++...+.. .+ +|+++. ++.+++. .+++++...++-.++.....+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899997 99999999888754 56 666664 4444444 456688776654332000001 1
Q ss_pred HHHHHhhCC-CcCEEEECCCChHHHHHHHHHhhcCCceEEE
Q 017457 245 QVIKEMTDG-GADYCFECIGLTSVMNDAFNSSREGWGKTVI 284 (371)
Q Consensus 245 ~~i~~~~~g-g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~ 284 (371)
+.+.++... .+|+|++++++...+...+.+++.+ -++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG-K~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG-KRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC-CcEEE
Confidence 122223333 6899999999877788899999875 44443
No 440
>PLN02928 oxidoreductase family protein
Probab=94.37 E-value=0.28 Score=46.14 Aligned_cols=97 Identities=23% Similarity=0.331 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-----cceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-----ITDFINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-----a~~v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
-.|+++.|+|.|.+|...++.++.+|. +|++.+++..+.. ...++ ...+.+... ...++.+.+. ..|
T Consensus 157 l~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aD 228 (347)
T PLN02928 157 LFGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EAD 228 (347)
T ss_pred CCCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccC-cccCHHHHHh-----hCC
Confidence 357899999999999999999999999 9999987632211 11110 000110000 0012322222 478
Q ss_pred EEEECCCChH-----HHHHHHHHhhcCCceEEEECc
Q 017457 257 YCFECIGLTS-----VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 257 ~vid~~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+|+.+.+... .-...+..|+++ ..+|.++.
T Consensus 229 iVvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 229 IVVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 8887766322 124667778886 77777763
No 441
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.35 E-value=0.3 Score=43.02 Aligned_cols=79 Identities=20% Similarity=0.265 Sum_probs=47.0
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH-HHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK-FEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~-~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
+++++||+|+ |.+|...+..+...|+ +|+++.++..+ .+. ++..+.. .++ |-.+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4578999998 9999999999988999 77666655432 222 2222322 222 2222 1223333333322
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+++|.++.+.|.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 268999988764
No 442
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.34 E-value=0.31 Score=47.60 Aligned_cols=71 Identities=20% Similarity=0.158 Sum_probs=48.0
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh----HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE----KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~----~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~v 258 (371)
.+++++|+|+|.+|++++.+++..|+ +|++.+.+.. ..+.+.+.|.......+. .+. + ..++|+|
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~---~~~---~----~~~~d~v 72 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP---LEL---L----DEDFDLM 72 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC---HHH---h----cCcCCEE
Confidence 46889999998899999999999999 8999986542 223455567643332222 111 1 1148999
Q ss_pred EECCCC
Q 017457 259 FECIGL 264 (371)
Q Consensus 259 id~~g~ 264 (371)
+.+.|-
T Consensus 73 V~s~gi 78 (447)
T PRK02472 73 VKNPGI 78 (447)
T ss_pred EECCCC
Confidence 987764
No 443
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.33 E-value=0.21 Score=43.91 Aligned_cols=79 Identities=14% Similarity=0.186 Sum_probs=45.9
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhHHHH-HHHh---Ccc-eEEcCCCCCCccHHHHHHHhh--CCCc
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDI-NPEKFEI-GKKF---GIT-DFINPATCGDKTVSQVIKEMT--DGGA 255 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~-~~~~~~~-~~~l---ga~-~v~~~~~~~~~~~~~~i~~~~--~gg~ 255 (371)
+++||+|+ |++|...+..+...|+ +|+++.+ ++++.+. ..+. +.. .++..+-.+...+.+.+.++. .+.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 47899997 9999999999988999 8888776 4443332 2222 211 122111101122333333322 1368
Q ss_pred CEEEECCCC
Q 017457 256 DYCFECIGL 264 (371)
Q Consensus 256 d~vid~~g~ 264 (371)
|++|++.|.
T Consensus 80 d~vi~~ag~ 88 (242)
T TIGR01829 80 DVLVNNAGI 88 (242)
T ss_pred cEEEECCCC
Confidence 999998873
No 444
>PRK05855 short chain dehydrogenase; Validated
Probab=94.32 E-value=0.23 Score=49.95 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=51.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcc-eE--EcCCCCCCccHHHHHHHhhC--
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGIT-DF--INPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~-~v--~~~~~~~~~~~~~~i~~~~~-- 252 (371)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. ..|.. .+ .|-.+ .+...+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 4578999998 9999998888888999 8999999887765442 23432 12 22222 1222222333222
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 368999998874
No 445
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.32 E-value=1.1 Score=41.59 Aligned_cols=103 Identities=13% Similarity=0.051 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHHH-h---CcceEEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGKK-F---GITDFINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~~-l---ga~~v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
...++|+|+|+|..|.+.+.... ..+..+|.+..+++++.+.+.+ + |.. +... .+..+.+ .++|
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~aD 191 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQAD 191 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hcCC
Confidence 56789999999999999876444 4676699999999888665543 3 321 1111 1222222 2689
Q ss_pred EEEECCCChHH-HHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457 257 YCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299 (371)
Q Consensus 257 ~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 299 (371)
+|+.++++... +. .+.++++ -.+...|. ......+++..
T Consensus 192 IVi~aT~s~~pvl~--~~~l~~g-~~i~~ig~-~~~~~~El~~~ 231 (314)
T PRK06141 192 IISCATLSTEPLVR--GEWLKPG-THLDLVGN-FTPDMRECDDE 231 (314)
T ss_pred EEEEeeCCCCCEec--HHHcCCC-CEEEeeCC-CCcccccCCHH
Confidence 99998886531 21 2457775 55555554 22333444443
No 446
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.30 E-value=0.39 Score=43.90 Aligned_cols=93 Identities=15% Similarity=0.219 Sum_probs=65.5
Q ss_pred ccccchhhhHHHHHHHcC-CCCCCeEEEEc-CChHHHHHHHHHHHcCCCeEEEEc-CChhHHHHHHHhCcceEEcCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFG-LGAVGLAVAEGARLNRASKIIGVD-INPEKFEIGKKFGITDFINPATCG 239 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G-~g~~G~~ai~la~~~g~~~Vi~~~-~~~~~~~~~~~lga~~v~~~~~~~ 239 (371)
.+||+....+. +.+..+ --.|++|+|+| .+.+|.-.+.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~-ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMM-LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHH-HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 45666555554 333333 35799999999 59999999999988999 888874 332
Q ss_pred CccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 240 DKTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 240 ~~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
++.+.++ .+|+|+-++|.+..+...+ ++++ ..++++|..
T Consensus 194 --~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 194 --DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred --CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 1111111 5799999999988555554 8887 899999974
No 447
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=94.30 E-value=0.71 Score=38.01 Aligned_cols=87 Identities=23% Similarity=0.275 Sum_probs=56.5
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE-KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~-~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
++++|.|+|-|..|++.++-+|-.|. +|++..+... ..+.+++.|.. + .+..+.++ ..|+|+-.
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~-v--------~~~~eAv~-----~aDvV~~L 67 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE-V--------MSVAEAVK-----KADVVMLL 67 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E-C--------CEHHHHHH-----C-SEEEE-
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe-e--------ccHHHHHh-----hCCEEEEe
Confidence 57899999999999999999999999 7776666555 78888888864 2 23444443 58999988
Q ss_pred CCChH---HH-HHHHHHhhcCCceEEEEC
Q 017457 262 IGLTS---VM-NDAFNSSREGWGKTVILG 286 (371)
Q Consensus 262 ~g~~~---~~-~~~~~~l~~~~G~~v~~g 286 (371)
+++.. .+ +.+...|++ |....|+
T Consensus 68 ~PD~~q~~vy~~~I~p~l~~--G~~L~fa 94 (165)
T PF07991_consen 68 LPDEVQPEVYEEEIAPNLKP--GATLVFA 94 (165)
T ss_dssp S-HHHHHHHHHHHHHHHS-T--T-EEEES
T ss_pred CChHHHHHHHHHHHHhhCCC--CCEEEeC
Confidence 88754 22 455567777 4555554
No 448
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.28 E-value=0.36 Score=45.64 Aligned_cols=35 Identities=20% Similarity=0.204 Sum_probs=31.2
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
.+.+|||+|+|++|..++..+...|.++++.++..
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999999999998864
No 449
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.26 E-value=0.48 Score=38.24 Aligned_cols=94 Identities=14% Similarity=0.083 Sum_probs=62.8
Q ss_pred ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
..+|....... +.+..+ --.|++|+|+|- ..+|.-.+.++...|+ .|+.+.+...
T Consensus 7 ~~p~t~~a~~~-ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKE-LLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHH-HHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 34444443333 233333 357999999997 8999999999999999 8888874321
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
++.+.++ .+|+++.++|....+. -+.++++ ..++++|..
T Consensus 64 -~l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~ 102 (140)
T cd05212 64 -QLQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPT 102 (140)
T ss_pred -CHHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCC
Confidence 2222222 5899999999876333 4458886 888887753
No 450
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.24 E-value=0.29 Score=46.31 Aligned_cols=82 Identities=22% Similarity=0.266 Sum_probs=47.1
Q ss_pred CCCCeEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--H--------------HHHHHHhCcc-eEEcCCCCCCc
Q 017457 182 EVGSTVAIFGL-GAVGLA--VAEGARLNRASKIIGVDINPE--K--------------FEIGKKFGIT-DFINPATCGDK 241 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~--ai~la~~~g~~~Vi~~~~~~~--~--------------~~~~~~lga~-~v~~~~~~~~~ 241 (371)
..++++||+|+ +++|++ .++.+ ..|+ +|+++....+ + .+.+++.|.. ..+.-+-.+++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 45689999997 899999 34444 7899 7777763221 1 2234455643 22322221122
Q ss_pred cHHHHHHHhhC--CCcCEEEECCCCh
Q 017457 242 TVSQVIKEMTD--GGADYCFECIGLT 265 (371)
Q Consensus 242 ~~~~~i~~~~~--gg~d~vid~~g~~ 265 (371)
...+.+..... |++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 33333333322 3799999998876
No 451
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.24 E-value=0.48 Score=43.39 Aligned_cols=70 Identities=21% Similarity=0.226 Sum_probs=49.0
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 265 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~ 265 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 37788999999987777777898 89999999999888877765311 12222221 467888777765
Q ss_pred HHHH
Q 017457 266 SVMN 269 (371)
Q Consensus 266 ~~~~ 269 (371)
....
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4333
No 452
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.23 E-value=0.43 Score=43.27 Aligned_cols=94 Identities=19% Similarity=0.180 Sum_probs=65.1
Q ss_pred ccccchhhhHHHHHHHcCC-CCCCeEEEEcCC-hHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGLG-AVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~g-~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
..||+...... +.+..++ -.|++|+|+|.| .+|.-.+.++...|+ .|+++.+..
T Consensus 136 ~~PcTp~avi~-lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------- 191 (285)
T PRK14191 136 FVPATPMGVMR-LLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------- 191 (285)
T ss_pred CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc----------------------
Confidence 45666555554 3444444 469999999985 999999999999999 888774321
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
.++.+.++ .+|+|+-++|.+..+. -+.++++ ..++++|..
T Consensus 192 ~~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 192 KDLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 12222222 5899999999877332 3467887 899999964
No 453
>PLN00016 RNA-binding protein; Provisional
Probab=94.22 E-value=0.5 Score=45.00 Aligned_cols=97 Identities=12% Similarity=0.099 Sum_probs=61.3
Q ss_pred CCCCeEEEE----cC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHH-----------HHHhCcceEEcCCCCCCccHHH
Q 017457 182 EVGSTVAIF----GL-GAVGLAVAEGARLNRASKIIGVDINPEKFEI-----------GKKFGITDFINPATCGDKTVSQ 245 (371)
Q Consensus 182 ~~g~~VLI~----G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~-----------~~~lga~~v~~~~~~~~~~~~~ 245 (371)
...++|||+ |+ |.+|...+..+...|. +|++++++...... +...|...+. .+..+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d 121 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD 121 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH
Confidence 334689999 98 9999999998888898 89999887654221 1223444332 12222
Q ss_pred HHHHhhCC-CcCEEEECCCChH-HHHHHHHHhhcC-CceEEEECc
Q 017457 246 VIKEMTDG-GADYCFECIGLTS-VMNDAFNSSREG-WGKTVILGV 287 (371)
Q Consensus 246 ~i~~~~~g-g~d~vid~~g~~~-~~~~~~~~l~~~-~G~~v~~g~ 287 (371)
+.+.... ++|+|+++.+... ....+++.+... -.++|.++.
T Consensus 122 -~~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 122 -VKSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred -HHhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 3232233 8999999876432 245666666644 136887764
No 454
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.20 E-value=0.39 Score=43.70 Aligned_cols=68 Identities=18% Similarity=0.272 Sum_probs=49.4
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 265 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~ 265 (371)
+|.|+|.|.+|...+..++..|. +|++.++++++.+.+.+.|..... . .+. +.+ ..+|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999888777777798 899999999998888877742111 1 111 111 2689999998865
Q ss_pred H
Q 017457 266 S 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
No 455
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=94.19 E-value=1.8 Score=38.56 Aligned_cols=96 Identities=10% Similarity=0.220 Sum_probs=61.7
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc-ceEEcCCCCCCccHHHHHHHhhCCCcCEE
Q 017457 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI-TDFINPATCGDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga-~~v~~~~~~~~~~~~~~i~~~~~gg~d~v 258 (371)
...++.+||-+|+|. |..+..+++ .|. +|++++.+++..+.+++... ..++..+- +++ .+..+.+|+|
T Consensus 39 ~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~fD~V 107 (251)
T PRK10258 39 PQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATFDLA 107 (251)
T ss_pred CccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcEEEE
Confidence 344678899999865 655555554 577 99999999998888876542 22221111 111 1122369999
Q ss_pred EECCC-----C-hHHHHHHHHHhhcCCceEEEECc
Q 017457 259 FECIG-----L-TSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 259 id~~g-----~-~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+.... . ...+..+.+.|+++ |.++....
T Consensus 108 ~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 108 WSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 86432 1 23478889999998 99887643
No 456
>PRK09135 pteridine reductase; Provisional
Probab=94.18 E-value=0.38 Score=42.42 Aligned_cols=35 Identities=14% Similarity=0.055 Sum_probs=30.1
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP 218 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~ 218 (371)
.++++||+|+ |.+|...+..+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4678999998 9999998888888899 899988753
No 457
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.18 E-value=0.32 Score=43.16 Aligned_cols=77 Identities=18% Similarity=0.218 Sum_probs=48.0
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhhC--CC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMTD--GG 254 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~~--gg 254 (371)
+++||+|+ |++|...++.+...|+ +|+.+.+++++.+.+ ...+.. ..+ |-.+ .+...+.+..... +.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 47899998 9999999988888999 899998876654433 222322 122 2222 1222222333322 26
Q ss_pred cCEEEECCCC
Q 017457 255 ADYCFECIGL 264 (371)
Q Consensus 255 ~d~vid~~g~ 264 (371)
+|+++++.|.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 458
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.17 E-value=0.41 Score=45.41 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=31.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDIN 217 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~ 217 (371)
.+.+|+|+|+|++|..++..+...|..+++.++..
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 45689999999999999999999999899999864
No 459
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.15 E-value=0.23 Score=43.19 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=61.4
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHH
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKE 249 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~ 249 (371)
....+++++++||-+|+|. |..+..+++.. . +|+.++.+++..+.+++ .+... +...+. .+...
T Consensus 71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~~~~- 140 (212)
T PRK00312 71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WKGWP- 140 (212)
T ss_pred HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------ccCCC-
Confidence 4456788999999998865 55555666654 3 89999998877665543 34332 222111 11000
Q ss_pred hhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEE
Q 017457 250 MTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 250 ~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
..+.||+|+....-......+.+.|+++ |+++..
T Consensus 141 -~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 141 -AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred -cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1137999885444444467788999998 987654
No 460
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.15 E-value=0.15 Score=43.13 Aligned_cols=92 Identities=17% Similarity=0.198 Sum_probs=57.1
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH----HhCcce--EEcCCCCCCccHHHHHHHhhCCCcC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK----KFGITD--FINPATCGDKTVSQVIKEMTDGGAD 256 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~----~lga~~--v~~~~~~~~~~~~~~i~~~~~gg~d 256 (371)
++++||=+|+|. |..++.+++.....+|++++.+++..+.++ +.+.+. ++.. +..+ + ...+.+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~------d~~~-~--~~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG------RAED-F--QHEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec------chhh-c--cccCCcc
Confidence 378999998865 566666666553338999999987665543 345432 2221 2211 1 1123799
Q ss_pred EEEECC-CC-hHHHHHHHHHhhcCCceEEEE
Q 017457 257 YCFECI-GL-TSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 257 ~vid~~-g~-~~~~~~~~~~l~~~~G~~v~~ 285 (371)
+|+... .. +..++.+.+.|+++ |.++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 998432 22 23456778889998 998866
No 461
>PLN02256 arogenate dehydrogenase
Probab=94.14 E-value=0.88 Score=41.98 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=62.6
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCC
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
+++...-..+.+|.|+|.|.+|...+..++..|. +|++.++++. .+.+.++|+.. . .+..+.+ ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence 4455555566789999999999988888888887 8999987764 35556677532 1 1222211 125
Q ss_pred cCEEEECCCChHHHHHHHHH-----hhcCCceEEEECc
Q 017457 255 ADYCFECIGLTSVMNDAFNS-----SREGWGKTVILGV 287 (371)
Q Consensus 255 ~d~vid~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 287 (371)
.|+|+-|+.... ....++. ++++ ..+++++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 789998888654 4443333 3454 56777765
No 462
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.12 E-value=0.57 Score=40.93 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=60.1
Q ss_pred CCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHH-HhCcceEE---------cCCCCCCccHHHHHHH
Q 017457 180 GVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGK-KFGITDFI---------NPATCGDKTVSQVIKE 249 (371)
Q Consensus 180 ~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~-~lga~~v~---------~~~~~~~~~~~~~i~~ 249 (371)
.+.++.+||+.|+|. |.-++.||. .|+ .|++++.++...+.+. +.+..... .... ..-+...+.+
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~--v~~~~~D~~~ 108 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE--ITIYCGDFFA 108 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc--eEEEECcccC
Confidence 456778999999876 677777765 799 9999999999888652 23321000 0000 0000011111
Q ss_pred hh---CCCcCEEEECCC--------ChHHHHHHHHHhhcCCceEEEE
Q 017457 250 MT---DGGADYCFECIG--------LTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 250 ~~---~gg~d~vid~~g--------~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
+. .+.+|.|+|... ....++.+.+.|+++ |+...+
T Consensus 109 l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~ 154 (218)
T PRK13255 109 LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV 154 (218)
T ss_pred CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence 11 126899998653 123478889999998 875543
No 463
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.09 E-value=0.35 Score=44.84 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=31.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 221 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~ 221 (371)
.|++|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~ 42 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDR 42 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcch
Confidence 4789999998 9999999988888899 888877766543
No 464
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.07 E-value=0.56 Score=45.55 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=63.6
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eE--EcCCCCCCccHHHHHHH
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DF--INPATCGDKTVSQVIKE 249 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v--~~~~~~~~~~~~~~i~~ 249 (371)
.....++|++||=+|+|+ |..++.+++.++..+|++++.++++++.+++ +|.. .+ .+.+. ..... .
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~~~---~ 304 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGPSQ---W 304 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccccc---c
Confidence 345678899999998755 4455566665552389999999998776643 5654 22 22211 11100 0
Q ss_pred hhCCCcCEEE-E--CCCCh-------------------------HHHHHHHHHhhcCCceEEEECc
Q 017457 250 MTDGGADYCF-E--CIGLT-------------------------SVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 250 ~~~gg~d~vi-d--~~g~~-------------------------~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
...+.||.|| | |+|.. ..+..+++.++++ |+++....
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc 369 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC 369 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence 0122799997 4 44421 2467788899998 99886643
No 465
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.07 E-value=0.38 Score=43.01 Aligned_cols=80 Identities=23% Similarity=0.189 Sum_probs=48.0
Q ss_pred CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC
Q 017457 182 EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 182 ~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~ 252 (371)
-+++++||+|+ |++|...++.+...|+ +|+++.++ ++..+. ++..+.. .++ |-.+ .+...+.+.....
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~ 81 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVK 81 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHH
Confidence 35789999998 9999999999989999 77776653 333222 2223432 122 3222 1222222222222
Q ss_pred --CCcCEEEECCCC
Q 017457 253 --GGADYCFECIGL 264 (371)
Q Consensus 253 --gg~d~vid~~g~ 264 (371)
+.+|+++++.|.
T Consensus 82 ~~g~id~lv~~ag~ 95 (261)
T PRK08936 82 EFGTLDVMINNAGI 95 (261)
T ss_pred HcCCCCEEEECCCC
Confidence 378999988874
No 466
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.44 Score=42.29 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=30.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFE 222 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~ 222 (371)
.+++++|+|+ |++|...+..+...|+ +|++. .++.++.+
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~ 45 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAAD 45 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHH
Confidence 3679999998 9999999998888899 77664 56665543
No 467
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.05 E-value=0.26 Score=50.62 Aligned_cols=78 Identities=24% Similarity=0.253 Sum_probs=51.2
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc-eEE--cCCCCCCccHHHHHHHhhC--C
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT-DFI--NPATCGDKTVSQVIKEMTD--G 253 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~-~v~--~~~~~~~~~~~~~i~~~~~--g 253 (371)
++++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ .+.. .++ |-.+ .++..+.+.+... +
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 678999998 9999999988888899 99999998877655422 2322 122 2222 1233333333322 3
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 468
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.03 E-value=0.31 Score=46.74 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=34.7
Q ss_pred cCCCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457 179 AGVEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 220 (371)
Q Consensus 179 ~~~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~ 220 (371)
.....+.+|||+|+ |.+|...+..+...|. +|++++++..+
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~ 96 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSG 96 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhh
Confidence 44567789999998 9999999999888999 89999887654
No 469
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.00 E-value=0.49 Score=47.70 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=57.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCC
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGL 264 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~ 264 (371)
++++|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...+.-. - .-.+.+++.--..+|.++-++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~----~~~~~L~~a~i~~a~~viv~~~~ 491 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-A----ANEEIMQLAHLDCARWLLLTIPN 491 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-C----CCHHHHHhcCccccCEEEEEcCC
Confidence 688999999999999999999999 89999999999999998887655432 2 12333443322278988877665
Q ss_pred hH
Q 017457 265 TS 266 (371)
Q Consensus 265 ~~ 266 (371)
..
T Consensus 492 ~~ 493 (558)
T PRK10669 492 GY 493 (558)
T ss_pred hH
Confidence 43
No 470
>PTZ00079 NADP-specific glutamate dehydrogenase; Provisional
Probab=93.99 E-value=1.2 Score=43.06 Aligned_cols=35 Identities=29% Similarity=0.240 Sum_probs=30.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEE-EEcCC
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKII-GVDIN 217 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi-~~~~~ 217 (371)
-+|++|+|.|.|.+|..+++.+..+|+ +|+ +.+++
T Consensus 235 l~Gk~VaVqG~GnVg~~aa~~L~e~Ga-kVVavSD~~ 270 (454)
T PTZ00079 235 LEGKTVVVSGSGNVAQYAVEKLLQLGA-KVLTMSDSD 270 (454)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEEcCC
Confidence 478999999999999999999999999 777 55555
No 471
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.99 E-value=0.26 Score=43.60 Aligned_cols=79 Identities=13% Similarity=0.164 Sum_probs=46.6
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhH-HHHHH---HhCcceE---EcCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVD-INPEK-FEIGK---KFGITDF---INPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~-~~~~~-~~~~~---~lga~~v---~~~~~~~~~~~~~~i~~~~~- 252 (371)
+++++||+|+ |++|...++.+...|+ +|++.. ++..+ .+.+. ..+.... .|-.+ .++..+.+.+...
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAE 78 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 4688999998 9999999999988999 676643 33332 22222 3343322 22222 1222222222221
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+++|+++++.|.
T Consensus 79 ~~~id~li~~ag~ 91 (246)
T PRK12938 79 VGEIDVLVNNAGI 91 (246)
T ss_pred hCCCCEEEECCCC
Confidence 378999998874
No 472
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=93.95 E-value=0.22 Score=45.49 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPE 219 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~ 219 (371)
.+++++||+|+|+.+.+++..+...|+++++++.++++
T Consensus 122 ~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 122 IKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 36789999999999988777667789889999999853
No 473
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=93.91 E-value=0.42 Score=40.56 Aligned_cols=97 Identities=22% Similarity=0.298 Sum_probs=61.8
Q ss_pred HHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcc--eEEcCCCCCCccHHHHHHHh
Q 017457 177 KVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGIT--DFINPATCGDKTVSQVIKEM 250 (371)
Q Consensus 177 ~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~--~v~~~~~~~~~~~~~~i~~~ 250 (371)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ .+.. .++.. +... .+
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~------d~~~---~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG------EAPI---EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec------Cchh---hc
Confidence 445677889999888865 6667777776532389999999987776654 3332 22221 1111 11
Q ss_pred hCCCcCEEEECCCC---hHHHHHHHHHhhcCCceEEEE
Q 017457 251 TDGGADYCFECIGL---TSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 251 ~~gg~d~vid~~g~---~~~~~~~~~~l~~~~G~~v~~ 285 (371)
.+.+|+|+..... ...+..+.+.|+++ |+++..
T Consensus 95 -~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 -PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred -CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 2379999854321 22467788999997 988764
No 474
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=93.90 E-value=0.67 Score=39.29 Aligned_cols=70 Identities=24% Similarity=0.377 Sum_probs=56.3
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
+++|.+||=+|+|. |.+...|.+..++ +.++++.++++...+.+-|.. |+. .+..+.+....++.||+||
T Consensus 11 I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 11 IEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI 80 (193)
T ss_pred cCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence 78999999999975 6666667777899 999999999999988888876 443 3555567777666899998
No 475
>TIGR02992 ectoine_eutC ectoine utilization protein EutC. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).
Probab=93.90 E-value=0.88 Score=42.46 Aligned_cols=103 Identities=17% Similarity=0.167 Sum_probs=65.5
Q ss_pred CCCCeEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhHHHHHH-Hh----CcceEEcCCCCCCccHHHHHHHhhCCCc
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGAR-LNRASKIIGVDINPEKFEIGK-KF----GITDFINPATCGDKTVSQVIKEMTDGGA 255 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~-~~g~~~Vi~~~~~~~~~~~~~-~l----ga~~v~~~~~~~~~~~~~~i~~~~~gg~ 255 (371)
...++++|+|+|..+.+.+..+. ..+.++|.+..++.++.+.+. ++ |.. +... .+..+.+ ..+
T Consensus 127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~-----~~~~~av-----~~a 195 (326)
T TIGR02992 127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA-----TDPRAAM-----SGA 195 (326)
T ss_pred CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe-----CCHHHHh-----ccC
Confidence 45678999999999988877775 578778999999988866543 33 432 2111 1233233 269
Q ss_pred CEEEECCCChHH-HHHHHHHhhcCCceEEEECccCCCCceecCHH
Q 017457 256 DYCFECIGLTSV-MNDAFNSSREGWGKTVILGVEMHGSPISLNSI 299 (371)
Q Consensus 256 d~vid~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 299 (371)
|+|+.|++.... +. .+.++++ -++..+|... ....+++..
T Consensus 196 DiVvtaT~s~~p~i~--~~~l~~g-~~i~~vg~~~-p~~rEld~~ 236 (326)
T TIGR02992 196 DIIVTTTPSETPILH--AEWLEPG-QHVTAMGSDA-EHKNEIDPA 236 (326)
T ss_pred CEEEEecCCCCcEec--HHHcCCC-cEEEeeCCCC-CCceecCHH
Confidence 999999886441 22 2347775 6777777632 223444444
No 476
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.89 E-value=0.73 Score=42.13 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.0
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI 223 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~ 223 (371)
.+|.|+|+|.+|...++.+...|. .|+..+.+++..+.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 479999999999887777777899 99999999988776
No 477
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=93.87 E-value=0.4 Score=44.20 Aligned_cols=75 Identities=17% Similarity=0.241 Sum_probs=51.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHH---HHHHhC-cc---eEEcCCCCCCccHHHHHHHhhCCC
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFE---IGKKFG-IT---DFINPATCGDKTVSQVIKEMTDGG 254 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~---~~~~lg-a~---~v~~~~~~~~~~~~~~i~~~~~gg 254 (371)
.+..|+|+|+ |-+|...+..+...|+ +|.++.|++++.+ .++++. +. .++..+-.+...|.+.+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----C
Confidence 5789999998 9999999999999999 9999999887633 355554 22 222222111233443332 7
Q ss_pred cCEEEECCC
Q 017457 255 ADYCFECIG 263 (371)
Q Consensus 255 ~d~vid~~g 263 (371)
.|.||.+..
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 899997544
No 478
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.85 E-value=0.75 Score=42.18 Aligned_cols=67 Identities=19% Similarity=0.220 Sum_probs=47.1
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCCCh
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIGLT 265 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g~~ 265 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .++.+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~--------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA--------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec--------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68899999999887777777888 89999999988887776664211 12222221 467888777754
Q ss_pred H
Q 017457 266 S 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 70 ~ 70 (296)
T PRK11559 70 P 70 (296)
T ss_pred H
Confidence 4
No 479
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.85 E-value=0.83 Score=42.60 Aligned_cols=95 Identities=16% Similarity=0.082 Sum_probs=64.1
Q ss_pred CeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceE-EcCCC----C-CCccHHHHHHHhhCCCcCEE
Q 017457 185 STVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDF-INPAT----C-GDKTVSQVIKEMTDGGADYC 258 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v-~~~~~----~-~~~~~~~~i~~~~~gg~d~v 258 (371)
-+|.|+|+|.+|.+.+..+...|. .|++.++++++.+.+...+.... ++... . ...+..+.+ ..+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 469999999999999888888898 89999998888777765421100 00000 0 001222221 268999
Q ss_pred EECCCChHHHHHHHHHhhcCCceEEEECc
Q 017457 259 FECIGLTSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 259 id~~g~~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+-++.... ....++.++++ -.++.+..
T Consensus 79 i~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 99999887 78888888875 66666643
No 480
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=93.84 E-value=0.37 Score=43.48 Aligned_cols=104 Identities=16% Similarity=0.169 Sum_probs=65.9
Q ss_pred HHHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc--ceEEcCCCCCCccHHHHHHHhhC
Q 017457 175 AWKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI--TDFINPATCGDKTVSQVIKEMTD 252 (371)
Q Consensus 175 l~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga--~~v~~~~~~~~~~~~~~i~~~~~ 252 (371)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.-. ..+ .... .+..+ ..+..
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCccc--CCCCC
Confidence 44556789999999999864 5556677777788 99999999988777765321 111 0000 11110 01112
Q ss_pred CCcCEEEEC--C---C--C-hHHHHHHHHHhhcCCceEEEECc
Q 017457 253 GGADYCFEC--I---G--L-TSVMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 253 gg~d~vid~--~---g--~-~~~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+.||+|+.. . + . ...++.+.+.|+|+ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 379999852 1 1 1 23467888999998 99887654
No 481
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=93.84 E-value=0.46 Score=41.89 Aligned_cols=77 Identities=12% Similarity=0.040 Sum_probs=46.6
Q ss_pred CeEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhHHHHH----HHhCcc-eEE--cCCCCCCccHHHHHHHhh--CC
Q 017457 185 STVAIFGL-GAVGLAVAEGARLNRASKIIGV-DINPEKFEIG----KKFGIT-DFI--NPATCGDKTVSQVIKEMT--DG 253 (371)
Q Consensus 185 ~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~-~~~~~~~~~~----~~lga~-~v~--~~~~~~~~~~~~~i~~~~--~g 253 (371)
+++||+|+ |++|...+..+...|+ +|+++ .+++++.+.. +..+.. .++ |-.+ .+...+.+.+.. .+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhCC
Confidence 47899998 9999999988888899 77664 5555544322 223322 222 2222 123333333332 23
Q ss_pred CcCEEEECCCC
Q 017457 254 GADYCFECIGL 264 (371)
Q Consensus 254 g~d~vid~~g~ 264 (371)
++|+++++.|.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 482
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=93.83 E-value=0.65 Score=42.28 Aligned_cols=87 Identities=23% Similarity=0.356 Sum_probs=55.9
Q ss_pred eEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhH--HHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 186 TVAIFGLGAVGLAV-AEGARLNRASKIIG-VDINPEK--FEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 186 ~VLI~G~g~~G~~a-i~la~~~g~~~Vi~-~~~~~~~--~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
+|.|+|+|.+|... ..+.+..+. ++.. ++.++++ ++.++++|.....+ ++...+. ...+|+|+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~-------~~e~ll~---~~dIDaV~ia 71 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE-------GVDGLLA---NPDIDIVFDA 71 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC-------CHHHHhc---CCCCCEEEEC
Confidence 58899999999865 555555567 5554 4445543 45677788654432 2222222 1279999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEE
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~ 285 (371)
++.....+.+..++.. |.-+..
T Consensus 72 Tp~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 72 TSAKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred CCcHHHHHHHHHHHHc--CCEEEE
Confidence 9998877777777776 444443
No 483
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.82 E-value=0.42 Score=43.37 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=65.5
Q ss_pred ccccchhhhHHHHHHHcC-CCCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAG-VEVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~-~~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
..||+...... +.+..+ --.|++|+|+|. ..+|.-.+.++...|+ +|++..+. +
T Consensus 137 ~~PcTp~aii~-lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~a-tVt~~hs~-------------------t--- 192 (285)
T PRK14189 137 FRPCTPYGVMK-MLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGA-TVTICHSK-------------------T--- 192 (285)
T ss_pred CcCCCHHHHHH-HHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEecCC-------------------C---
Confidence 35655554444 334444 347999999998 5669999999999999 88875422 1
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
.++.+.++ .+|+|+-++|.+..+.. +.++++ ..++++|..
T Consensus 193 ~~l~~~~~-----~ADIVV~avG~~~~i~~--~~ik~g-avVIDVGin 232 (285)
T PRK14189 193 RDLAAHTR-----QADIVVAAVGKRNVLTA--DMVKPG-ATVIDVGMN 232 (285)
T ss_pred CCHHHHhh-----hCCEEEEcCCCcCccCH--HHcCCC-CEEEEcccc
Confidence 23332222 58999999998774443 789997 899999964
No 484
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=93.78 E-value=1.3 Score=40.05 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=61.6
Q ss_pred cCCCCCCeEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhHHHHHHH----hCcceEEcCCCCCCccHHHHHHHhhCC
Q 017457 179 AGVEVGSTVAIFGLGAVGLAVAEGARLNR-ASKIIGVDINPEKFEIGKK----FGITDFINPATCGDKTVSQVIKEMTDG 253 (371)
Q Consensus 179 ~~~~~g~~VLI~G~g~~G~~ai~la~~~g-~~~Vi~~~~~~~~~~~~~~----lga~~v~~~~~~~~~~~~~~i~~~~~g 253 (371)
..+++|++||=+|+|+ |..++.++..++ ...|++++.++++.+.+++ +|...+.-... +.. .+.. ..+
T Consensus 67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~-~~~ 139 (264)
T TIGR00446 67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGA-AVP 139 (264)
T ss_pred hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhh-hcc
Confidence 4578899998888765 555555666553 2389999999998776643 56543211111 211 1111 122
Q ss_pred CcCEEE-E--CCCC-------------------------hHHHHHHHHHhhcCCceEEEEC
Q 017457 254 GADYCF-E--CIGL-------------------------TSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 254 g~d~vi-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.||.|+ | |+|. ...+..+++.++++ |+++...
T Consensus 140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYst 199 (264)
T TIGR00446 140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYST 199 (264)
T ss_pred CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 699997 4 4443 11467888899998 9887554
No 485
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=93.76 E-value=0.82 Score=41.87 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=56.0
Q ss_pred CeEEEEcCChHHHHHH-HHHHHcCCCeEEEEcCChh--HHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEEC
Q 017457 185 STVAIFGLGAVGLAVA-EGARLNRASKIIGVDINPE--KFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFEC 261 (371)
Q Consensus 185 ~~VLI~G~g~~G~~ai-~la~~~g~~~Vi~~~~~~~--~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~ 261 (371)
-+|.|+|.|.+|...+ .+.+.-+..-+.+++.+++ .+++++++|..... .++...+.+..-..+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~-------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA-------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc-------CCHHHHHhCcCCCCCCEEEEC
Confidence 4689999999998744 4444446633334445544 34567778864332 123222321000269999999
Q ss_pred CCChHHHHHHHHHhhcCCceEEEEC
Q 017457 262 IGLTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 262 ~g~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
++.....+.+...+..+ -++++..
T Consensus 78 T~a~~H~e~a~~a~eaG-k~VID~s 101 (302)
T PRK08300 78 TSAGAHVRHAAKLREAG-IRAIDLT 101 (302)
T ss_pred CCHHHHHHHHHHHHHcC-CeEEECC
Confidence 99887666666666664 4555544
No 486
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.75 E-value=0.51 Score=40.72 Aligned_cols=96 Identities=19% Similarity=0.253 Sum_probs=62.6
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHH----hCcce--EEcCCCCCCccHHHHHHHhh-CCCc
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKK----FGITD--FINPATCGDKTVSQVIKEMT-DGGA 255 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~----lga~~--v~~~~~~~~~~~~~~i~~~~-~gg~ 255 (371)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+... ++. .+..+.+.... .+.+
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~------~d~~~~l~~~~~~~~~ 112 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC------GDAVEVLLDMFPDGSL 112 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe------cCHHHHHHHHcCcccc
Confidence 667889999876 7777778876543389999999988887754 23222 222 23322333222 3378
Q ss_pred CEEEECCC--------------ChHHHHHHHHHhhcCCceEEEEC
Q 017457 256 DYCFECIG--------------LTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 256 d~vid~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|.|+-... ....++.+.+.|+++ |.++...
T Consensus 113 D~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 113 DRIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred ceEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 98874322 133578899999998 9988764
No 487
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.74 E-value=0.43 Score=42.40 Aligned_cols=78 Identities=15% Similarity=0.202 Sum_probs=46.4
Q ss_pred CCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hHHHH----HHHhCcc-eEE--cCCCCCCccHHHHHHHhhC--
Q 017457 184 GSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINP-EKFEI----GKKFGIT-DFI--NPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 184 g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~-~~~~~----~~~lga~-~v~--~~~~~~~~~~~~~i~~~~~-- 252 (371)
.+++||+|+ |++|...+..+...|+ +|++++++. ++.+. ++..+.. .++ |..+ ..+..+.+.....
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD--LSAHEAMLDAAQAAW 78 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHhc
Confidence 367999998 9999999988888899 888887653 22221 2222322 222 2222 1223333333322
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+.+|+++.+.|.
T Consensus 79 ~~id~vi~~ag~ 90 (256)
T PRK12745 79 GRIDCLVNNAGV 90 (256)
T ss_pred CCCCEEEECCcc
Confidence 368999998763
No 488
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=93.74 E-value=0.73 Score=43.06 Aligned_cols=86 Identities=27% Similarity=0.195 Sum_probs=56.7
Q ss_pred CCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECC
Q 017457 183 VGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECI 262 (371)
Q Consensus 183 ~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~ 262 (371)
.|.+|.|+|.|.+|...+..++..|. +|++.+++++..... .. .. .++.+.+. ..|+|+-+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~~----~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----LT----YK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----hh----cc----CCHHHHHh-----cCCEEEEeC
Confidence 67799999999999999999999999 999999876543211 00 00 12222221 578888777
Q ss_pred CChH-----HHHHHHHHhhcCCceEEEECc
Q 017457 263 GLTS-----VMNDAFNSSREGWGKTVILGV 287 (371)
Q Consensus 263 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 287 (371)
+... .....+..++++ ..+|..+.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 7432 123555667775 67776653
No 489
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.74 E-value=0.49 Score=42.88 Aligned_cols=94 Identities=15% Similarity=0.208 Sum_probs=65.9
Q ss_pred ccccchhhhHHHHHHHcCC-CCCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCC
Q 017457 163 LLSCGVSTGVGAAWKVAGV-EVGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGD 240 (371)
Q Consensus 163 ~~~~~~~ta~~~l~~~~~~-~~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~ 240 (371)
..||+....+. +.+..++ -.|++|+|+|- ..+|.-.+.+++..|+ .|++..+..
T Consensus 138 ~~PcTp~av~~-ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T---------------------- 193 (285)
T PRK10792 138 LRPCTPRGIMT-LLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFT---------------------- 193 (285)
T ss_pred CCCCCHHHHHH-HHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCC----------------------
Confidence 35665555554 3344443 46999999997 5699999999999999 888876431
Q ss_pred ccHHHHHHHhhCCCcCEEEECCCChHHHHHHHHHhhcCCceEEEECcc
Q 017457 241 KTVSQVIKEMTDGGADYCFECIGLTSVMNDAFNSSREGWGKTVILGVE 288 (371)
Q Consensus 241 ~~~~~~i~~~~~gg~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 288 (371)
.++.+.++ .+|+++.++|.+..+. -+.++++ ..++++|..
T Consensus 194 ~~l~~~~~-----~ADIvi~avG~p~~v~--~~~vk~g-avVIDvGin 233 (285)
T PRK10792 194 KNLRHHVR-----NADLLVVAVGKPGFIP--GEWIKPG-AIVIDVGIN 233 (285)
T ss_pred CCHHHHHh-----hCCEEEEcCCCccccc--HHHcCCC-cEEEEcccc
Confidence 22322222 5899999999887433 2678887 899999964
No 490
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=93.73 E-value=0.78 Score=42.34 Aligned_cols=89 Identities=22% Similarity=0.310 Sum_probs=60.1
Q ss_pred CCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEE
Q 017457 181 VEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFE 260 (371)
Q Consensus 181 ~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid 260 (371)
.-.|++|.|+|-|.+|.+.++.++..|. +|++..+.....+.+...|+. +. ++.+.+. ..|+|+-
T Consensus 13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~--------sl~Eaak-----~ADVV~l 77 (335)
T PRK13403 13 LLQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM--------SVSEAVR-----TAQVVQM 77 (335)
T ss_pred hhCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC--------CHHHHHh-----cCCEEEE
Confidence 4568999999999999999999999999 888876555455556666653 21 2222222 5899998
Q ss_pred CCCChHH---H-HHHHHHhhcCCceEEEEC
Q 017457 261 CIGLTSV---M-NDAFNSSREGWGKTVILG 286 (371)
Q Consensus 261 ~~g~~~~---~-~~~~~~l~~~~G~~v~~g 286 (371)
+.+.+.. + ...+..|++ |.++.++
T Consensus 78 lLPd~~t~~V~~~eil~~MK~--GaiL~f~ 105 (335)
T PRK13403 78 LLPDEQQAHVYKAEVEENLRE--GQMLLFS 105 (335)
T ss_pred eCCChHHHHHHHHHHHhcCCC--CCEEEEC
Confidence 8876442 2 235556666 4555554
No 491
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=93.69 E-value=0.56 Score=47.86 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=58.6
Q ss_pred CCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCcceEEcCCCCCCccHHHHHHHhhCCCcCEEEECCC
Q 017457 184 GSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGITDFINPATCGDKTVSQVIKEMTDGGADYCFECIG 263 (371)
Q Consensus 184 g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga~~v~~~~~~~~~~~~~~i~~~~~gg~d~vid~~g 263 (371)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|.+.++ .+. .-.+.+++.--..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA----TRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 899999999999999988875443 222 1123333332227899998888
Q ss_pred ChH
Q 017457 264 LTS 266 (371)
Q Consensus 264 ~~~ 266 (371)
+..
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 755
No 492
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=93.67 E-value=0.39 Score=44.54 Aligned_cols=38 Identities=16% Similarity=0.146 Sum_probs=31.7
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhHH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEKF 221 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~~ 221 (371)
.+++|||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 4789999998 9999999999888999 888877665543
No 493
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=93.66 E-value=0.74 Score=41.69 Aligned_cols=102 Identities=19% Similarity=0.161 Sum_probs=59.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhC-c-ceEEcCCCC--CCccHHHHHHHhhCCCcCE
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFG-I-TDFINPATC--GDKTVSQVIKEMTDGGADY 257 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lg-a-~~v~~~~~~--~~~~~~~~i~~~~~gg~d~ 257 (371)
..+++||++|+|. |..+..+++.....++++++.+++-.+.+++.- . ...++..+. ...+..+.+.+ ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 4456999998865 445556666665558999999887767666521 0 000100000 00233333332 2348999
Q ss_pred EE-ECC---C------ChHHHHHHHHHhhcCCceEEEEC
Q 017457 258 CF-ECI---G------LTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 258 vi-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
|+ |.. + ....++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 97 443 1 123357888999998 9988764
No 494
>PRK07069 short chain dehydrogenase; Validated
Probab=93.59 E-value=0.35 Score=42.83 Aligned_cols=76 Identities=21% Similarity=0.265 Sum_probs=46.6
Q ss_pred eEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHHH-h----Ccc--eEE--cCCCCCCccHHHHHHHhhC--
Q 017457 186 TVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGKK-F----GIT--DFI--NPATCGDKTVSQVIKEMTD-- 252 (371)
Q Consensus 186 ~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~~-l----ga~--~v~--~~~~~~~~~~~~~i~~~~~-- 252 (371)
++||+|+ |++|...++.+...|+ +|++++++ .++.+.+.+ + +.. ..+ |-.+ .+.+.+.+.+...
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 3789987 9999998888888899 89999877 555444322 2 111 111 3222 1233333333222
Q ss_pred CCcCEEEECCCC
Q 017457 253 GGADYCFECIGL 264 (371)
Q Consensus 253 gg~d~vid~~g~ 264 (371)
+++|+++.+.|.
T Consensus 78 ~~id~vi~~ag~ 89 (251)
T PRK07069 78 GGLSVLVNNAGV 89 (251)
T ss_pred CCccEEEECCCc
Confidence 378999998873
No 495
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.57 E-value=0.45 Score=42.54 Aligned_cols=79 Identities=15% Similarity=0.272 Sum_probs=47.8
Q ss_pred CCCeEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hHHHHH-HHhCcc-eE--EcCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL---GAVGLAVAEGARLNRASKIIGVDINP--EKFEIG-KKFGIT-DF--INPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~---g~~G~~ai~la~~~g~~~Vi~~~~~~--~~~~~~-~~lga~-~v--~~~~~~~~~~~~~~i~~~~~- 252 (371)
.++++||+|+ +++|.+.+..+...|+ +|+.++++. +..+.+ .+++.. .. .|-.+ .++..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 82 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN--EEHLASLADRVREH 82 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC--HHHHHHHHHHHHHH
Confidence 5789999985 6999999888888999 899887653 333333 334321 12 22222 1223333333222
Q ss_pred -CCcCEEEECCCC
Q 017457 253 -GGADYCFECIGL 264 (371)
Q Consensus 253 -gg~d~vid~~g~ 264 (371)
+++|+++++.|.
T Consensus 83 ~g~iD~li~nAG~ 95 (256)
T PRK07889 83 VDGLDGVVHSIGF 95 (256)
T ss_pred cCCCcEEEEcccc
Confidence 379999987763
No 496
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=93.57 E-value=0.6 Score=38.48 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=55.7
Q ss_pred eEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHhCc------ceEEcCCCCCCccHHHHHHHhhCCCcCEEE
Q 017457 186 TVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKFGI------TDFINPATCGDKTVSQVIKEMTDGGADYCF 259 (371)
Q Consensus 186 ~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~lga------~~v~~~~~~~~~~~~~~i~~~~~gg~d~vi 259 (371)
+|.|+|+|..|.+.+..+...|. +|+.-.++++..+.+++-+. ...+...-.-..++.+.++ +.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~-----~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALE-----DADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHT-----T-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhC-----cccEEE
Confidence 58899999999999999999998 99999999988777765322 0001000000123433332 689999
Q ss_pred ECCCChHHHHHHHHHhhc
Q 017457 260 ECIGLTSVMNDAFNSSRE 277 (371)
Q Consensus 260 d~~g~~~~~~~~~~~l~~ 277 (371)
-+++... .+..++.+.+
T Consensus 75 iavPs~~-~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAP 91 (157)
T ss_dssp E-S-GGG-HHHHHHHHTT
T ss_pred ecccHHH-HHHHHHHHhh
Confidence 9998766 6667776666
No 497
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=93.57 E-value=0.42 Score=42.66 Aligned_cols=97 Identities=20% Similarity=0.204 Sum_probs=61.7
Q ss_pred CCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHHHHHh-Cc---------ceEEcCCCCCCccHHHHHHHhh
Q 017457 182 EVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEIGKKF-GI---------TDFINPATCGDKTVSQVIKEMT 251 (371)
Q Consensus 182 ~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~~~~l-ga---------~~v~~~~~~~~~~~~~~i~~~~ 251 (371)
.+.++|||+|+|. |..+-.+++.-...+|.+++.+++=.+.++++ +. -+++. .+-...+++..
T Consensus 75 ~~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~------~Dg~~~l~~~~ 147 (246)
T PF01564_consen 75 PNPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIII------GDGRKFLKETQ 147 (246)
T ss_dssp SST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEE------STHHHHHHTSS
T ss_pred CCcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEE------hhhHHHHHhcc
Confidence 4689999998755 55555777776666999999998877777763 21 12332 34444454433
Q ss_pred CCCcCEEE-ECCC---------ChHHHHHHHHHhhcCCceEEEEC
Q 017457 252 DGGADYCF-ECIG---------LTSVMNDAFNSSREGWGKTVILG 286 (371)
Q Consensus 252 ~gg~d~vi-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 286 (371)
.+.+|+++ |... +...++.+.++|+++ |.++.-.
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 148 EEKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp ST-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CCcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 22799997 6554 124478889999997 9887654
No 498
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=93.55 E-value=0.35 Score=44.71 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=31.4
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhH
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDINPEK 220 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~~~~ 220 (371)
.+++|||+|+ |.+|...+..+...|. +|+++.++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~-~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGY-TVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCC-EEEEEEcCCCc
Confidence 3678999997 9999999999988999 89888776544
No 499
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.55 E-value=0.44 Score=41.92 Aligned_cols=78 Identities=15% Similarity=0.174 Sum_probs=45.5
Q ss_pred CCCeEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhHHHHHH----HhCcc-eEE--cCCCCCCccHHHHHHHhhC-
Q 017457 183 VGSTVAIFGL-GAVGLAVAEGARLNRASKIIGVDIN-PEKFEIGK----KFGIT-DFI--NPATCGDKTVSQVIKEMTD- 252 (371)
Q Consensus 183 ~g~~VLI~G~-g~~G~~ai~la~~~g~~~Vi~~~~~-~~~~~~~~----~lga~-~v~--~~~~~~~~~~~~~i~~~~~- 252 (371)
+.++|||+|+ |.+|...+..+...|+ +|+++.++ .+..+.+. ..+.. +++ |..+ ...+.+.+.+...
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~ 81 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVER 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHHH
Confidence 3578999998 9999999999988999 66665544 33333222 22322 222 2222 1222222222211
Q ss_pred -CCcCEEEECCC
Q 017457 253 -GGADYCFECIG 263 (371)
Q Consensus 253 -gg~d~vid~~g 263 (371)
+++|.++++.|
T Consensus 82 ~~~id~vi~~ag 93 (249)
T PRK12825 82 FGRIDILVNNAG 93 (249)
T ss_pred cCCCCEEEECCc
Confidence 37899999887
No 500
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=93.54 E-value=0.45 Score=44.05 Aligned_cols=97 Identities=14% Similarity=0.075 Sum_probs=60.1
Q ss_pred HHHcCCCCCCeEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhHHHH---HHHh-Cc---ceEEcCCCCCCccHHHHHH
Q 017457 176 WKVAGVEVGSTVAIFGLGAVGLAVAEGARLNRASKIIGVDINPEKFEI---GKKF-GI---TDFINPATCGDKTVSQVIK 248 (371)
Q Consensus 176 ~~~~~~~~g~~VLI~G~g~~G~~ai~la~~~g~~~Vi~~~~~~~~~~~---~~~l-ga---~~v~~~~~~~~~~~~~~i~ 248 (371)
.......+|++||=+|+|. |..+..+++ .|+..|++++.++.-... +++. +. .++.. .+ +.
T Consensus 114 l~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~------~~----ie 181 (314)
T TIGR00452 114 LPHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP------LG----IE 181 (314)
T ss_pred HHhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE------CC----HH
Confidence 3344567789999999876 666666665 476589999998865433 2222 21 12221 11 12
Q ss_pred HhhCC-CcCEEEECC-----CCh-HHHHHHHHHhhcCCceEEEE
Q 017457 249 EMTDG-GADYCFECI-----GLT-SVMNDAFNSSREGWGKTVIL 285 (371)
Q Consensus 249 ~~~~g-g~d~vid~~-----g~~-~~~~~~~~~l~~~~G~~v~~ 285 (371)
++... .||+|+... .++ ..+..+.+.|+++ |+++.-
T Consensus 182 ~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvle 224 (314)
T TIGR00452 182 QLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLE 224 (314)
T ss_pred HCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEE
Confidence 22222 799998542 122 3588999999998 998864
Done!