BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017458
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54T05|RIO2_DICDI Serine/threonine-protein kinase rio2 OS=Dictyostelium discoideum
GN=rio2 PE=3 SV=1
Length = 522
Score = 396 bits (1017), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/322 (58%), Positives = 240/322 (74%), Gaps = 17/322 (5%)
Query: 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKL 60
MKLD LRYLSKDDFR L AVEMGM+NHE+VP L+ IA+LK+GGT K ++ L ++KL
Sbjct: 1 MKLDPKALRYLSKDDFRTLVAVEMGMKNHELVPVSLICTIANLKYGGTKKSIQTLHKFKL 60
Query: 61 LHHDSSKYDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAM 120
L HD YDG++LTYLGYDFLA+KTLV+RGV + VG Q+GVGKESDI+ VA +D + +
Sbjct: 61 LFHDGRNYDGYKLTYLGYDFLALKTLVSRGVCSYVGNQIGVGKESDIYIVANDDNQEMVL 120
Query: 121 KLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN 180
KLHRLGR SF+ +K+ RDYL+HR S +WLYLSRLAALKEFA+MKAL ++GFPVP +D N
Sbjct: 121 KLHRLGRVSFKTIKNNRDYLKHRKSASWLYLSRLAALKEFAYMKALYENGFPVPTPIDYN 180
Query: 181 RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
RHC++MS +GYPL Q+ QL++P V+ ++ L+V+LA +GLIH DFNEFNI+I+D+E++
Sbjct: 181 RHCIVMSRARGYPLTQIVQLRHPSKVYSDLMNLIVKLASYGLIHGDFNEFNILINDEEEI 240
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300
T+IDFPQMVS SH NA+MYFDRDV CI FF KRF+ + D +I +
Sbjct: 241 TLIDFPQMVSTSHLNAEMYFDRDVTCIRVFFEKRFNFIGERWPKFKDCQNIHS------- 293
Query: 301 FASISKTAGFLDKELAASGFTR 322
LD E++ASGFTR
Sbjct: 294 ----------LDVEISASGFTR 305
>sp|Q9CQS5|RIOK2_MOUSE Serine/threonine-protein kinase RIO2 OS=Mus musculus GN=Riok2 PE=1
SV=1
Length = 547
Score = 371 bits (953), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/325 (55%), Positives = 240/325 (73%), Gaps = 18/325 (5%)
Query: 2 KLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLL 61
K++V LRY+S+DDFRVLTAVEMGM+NHEIVP L+ IASLKHGG K+L+ L+++KL+
Sbjct: 3 KVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPCSLIASIASLKHGGCNKILRELVKHKLI 62
Query: 62 HHDSSK-YDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAM 120
+ +K G+RLT GYD+LA+KTL +R V +VG Q+GVGKESDI+ VA E G LA+
Sbjct: 63 AWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEAGQQLAL 122
Query: 121 KLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN 180
KLHRLGRTSFR +K+KRDY +HR++ +WLYLSRL+A+KEFA+MKAL + FPVP +D N
Sbjct: 123 KLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYN 182
Query: 181 RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
RH VIM L+ GYPL Q++ +++P SV++ + L+V+L HGLIH DFNEFN+M+D D+ +
Sbjct: 183 RHAVIMELINGYPLCQIHHVEDPASVYDEAMELIVKLGNHGLIHGDFNEFNLMLDKDDHI 242
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300
TMIDFPQMVS SH NA+ YFDRDV+CI +FF KRF E+ SDI ++
Sbjct: 243 TMIDFPQMVSTSHPNAEWYFDRDVKCIREFFMKRFSY---ESELYPTFSDIRKEDS---- 295
Query: 301 FASISKTAGFLDKELAASGFTRKDQ 325
LD E++ASG+T++ Q
Sbjct: 296 ----------LDVEVSASGYTKEMQ 310
>sp|Q9BVS4|RIOK2_HUMAN Serine/threonine-protein kinase RIO2 OS=Homo sapiens GN=RIOK2 PE=1
SV=2
Length = 552
Score = 367 bits (943), Expect = e-101, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 237/325 (72%), Gaps = 18/325 (5%)
Query: 2 KLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLL 61
K++V LRY+S+DDFRVLTAVEMGM+NHEIVP L+ IASLKHGG KVL+ L+++KL+
Sbjct: 3 KVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHKLI 62
Query: 62 HHDSSK-YDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAM 120
+ +K G+RLT GYD+LA+KTL +R V +VG Q+GVGKESDI+ VA E+G A+
Sbjct: 63 AWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQFAL 122
Query: 121 KLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN 180
KLHRLGRTSFR +K+KRDY +HR++ +WLYLSRL+A+KEFA+MKAL + FPVP +D N
Sbjct: 123 KLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYN 182
Query: 181 RHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
RH V+M L+ GYPL Q++ +++P SV++ + L+V+LA HGLIH DFNEFN+++D+ + +
Sbjct: 183 RHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESDHI 242
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRLS 300
TMIDFPQMVS SH NA+ YFDRDV+CI FF KRF + D DT
Sbjct: 243 TMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDT------- 295
Query: 301 FASISKTAGFLDKELAASGFTRKDQ 325
LD E++ASG+T++ Q
Sbjct: 296 ----------LDVEVSASGYTKEMQ 310
>sp|Q9P7W5|RIO2_SCHPO Serine/threonine-protein kinase rio2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio2 PE=3 SV=2
Length = 344
Score = 325 bits (833), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 160/348 (45%), Positives = 226/348 (64%), Gaps = 19/348 (5%)
Query: 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKL 60
+ L++ +RYLS +DFR LTAVEMG RNHE+VP+ ++++IA ++ G K L L +KL
Sbjct: 2 VNLNIKAMRYLSAEDFRTLTAVEMGSRNHEVVPTNMINQIAKIRGGSCTKSLSVLFMHKL 61
Query: 61 LHH-DSSKYDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLA 119
+ Y+G+RLTY GYD+LA+K L R +VG Q+GVGKESD++ V + G
Sbjct: 62 IAKVPHISYEGYRLTYAGYDYLALKALSKRASVYSVGNQIGVGKESDVYVVGDQKGKQYI 121
Query: 120 MKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC 179
+K+HRLGR SFR+VK+ RDYLR+R + +W YLSRLAA KEFAFMK L +HGFPVP +D
Sbjct: 122 LKIHRLGRISFRSVKNNRDYLRNRKTGSWQYLSRLAATKEFAFMKILHEHGFPVPAPIDH 181
Query: 180 NRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEK 239
+RHC+IM ++ +PL V +++P ++++T++ ++VR A +GLIH DFNEFNI++ +D
Sbjct: 182 SRHCIIMEMIDAFPLRAVTDIRDPPALYQTLMDIIVRFARNGLIHGDFNEFNIIVREDGT 241
Query: 240 VTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTDEGSRL 299
+IDFPQMVS SH +AQ YFDRDV+CI ++F K N+Q D + DI E
Sbjct: 242 AVVIDFPQMVSTSHPDAQFYFDRDVQCIVQYFEK----NYQYKGDVPNFEDISKME---- 293
Query: 300 SFASISKTAGFLDKELAASGFTRKDQDVIQKFIGGSIEESGSDDEGSD 347
LD + ASGF +K ++K+ EE + G D
Sbjct: 294 -------KENNLDIMIEASGFNKKQSKELEKY---RQEEEKRKENGDD 331
>sp|P40160|RIO2_YEAST Serine/threonine-protein kinase RIO2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO2 PE=1 SV=1
Length = 425
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 163/387 (42%), Positives = 240/387 (62%), Gaps = 23/387 (5%)
Query: 1 MKLDVDVLRYLSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLK-HGGTYKVLKNLLRYK 59
MKLD +RYL+ DDFRVL AVE G R+HE+VP+ L+H+I+ ++ GT + + +L +
Sbjct: 1 MKLDTSHMRYLTTDDFRVLQAVEQGSRSHEVVPTPLIHQISGMRSQSGTNRAISDLAKLS 60
Query: 60 LLHH-DSSKYDGFRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVL 118
L+ + KYDG+RLTY G D+LA+KT++NR +VG +GVGKESDI++V+ ++G
Sbjct: 61 LISKMRNVKYDGYRLTYNGIDYLALKTMLNRDTVYSVGNTIGVGKESDIYKVSDKNGNPR 120
Query: 119 AMKLHRLGRTSFRAVKSKRDYLRHRNS-YNWLYLSRLAALKEFAFMKALEDHGFPVPNAV 177
MK+HRLGRTSF +V++ RDYL+ N NW++LSRLAA KE+ FM L GF VP
Sbjct: 121 VMKIHRLGRTSFHSVRNNRDYLKKSNQGANWMHLSRLAANKEYQFMSMLYSKGFKVPEPF 180
Query: 178 DCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDD- 236
D +RH V+M L++GYP+ ++ + +N ++ ++ +V LA GLIHCDFNEFNIMI D
Sbjct: 181 DNSRHIVVMELIEGYPMRRLRKHKNIPKLYSDLMCFIVDLANSGLIHCDFNEFNIMIKDK 240
Query: 237 -----DEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDI 291
D +IDFPQ +S+ HQ+A YF RDV+CI +FF+K+ L ++ D S +
Sbjct: 241 LEDENDCGFVVIDFPQCISIQHQDADYYFQRDVDCIRRFFKKK--LKYEPKP---DSSML 295
Query: 292 DTD---EGSRLSFASIS---KTAGFLDKELAASGFTRK---DQDVIQKFIGGSIEESGSD 342
DT+ +G + ++ K LD+ + ASGF++K D+ + SD
Sbjct: 296 DTEGFGDGYKYAYPDFKRDVKRTDNLDELVQASGFSKKHPGDRGLETAVESMRNAVYNSD 355
Query: 343 DEGSDDGNESETNETNVDGLDSLHLAE 369
D+ S+D E E E + D + +E
Sbjct: 356 DDMSNDEAEEENGEGDYSEEDEYYDSE 382
>sp|Q58473|RIO2_METJA RIO-type serine/threonine-protein kinase Rio2 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio2 PE=3 SV=1
Length = 270
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 140/256 (54%), Gaps = 15/256 (5%)
Query: 26 MRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDGFRLTYLGYDFLAIKT 85
MR+HE VP + + R A + LK L ++ + + G+ ++ GYD LAI
Sbjct: 1 MRHHEWVPLDEIVRKAKMPEKDVLYRLKRLNKFGFVVRSTY---GYAVSMGGYDALAINA 57
Query: 86 LVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNS 145
V +G+ A+G +LGVGKE D++ V DG +K H+ GRT F K R YL ++
Sbjct: 58 FVKKGILKAIGNKLGVGKEGDVYTVLLSDGREAVLKFHKHGRTCFTRGKRYRGYLADKHH 117
Query: 146 YNWLYLSRLAALKEFAFMKALEDHGFP---VPNAVDCNRHCVIMSLVQGYPL--VQVNQL 200
+WLY+SRL A +EF + L FP VP ++ NRH +IM V G L + +++
Sbjct: 118 ISWLYVSRLTAEREFEILNEL----FPIVKVPEPIEWNRHAIIMGKVVGEELKRLDLSEF 173
Query: 201 QNPDSV---FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQ 257
+ + + F II V + E G IH D +EFNI++D++ +ID+PQ V H +A+
Sbjct: 174 MSKEEIKDLFWKIIEEVKKAYEIGYIHGDLSEFNILLDENGDFVIIDWPQAVPKYHPDAE 233
Query: 258 MYFDRDVECIFKFFRK 273
Y RD+ + ++F+K
Sbjct: 234 FYLKRDIWNVIRYFKK 249
>sp|O30245|RIO2_ARCFU RIO-type serine/threonine-protein kinase Rio2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio2 PE=1 SV=1
Length = 282
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 144/282 (51%), Gaps = 14/282 (4%)
Query: 11 LSKDDFRVLTAVEMGMRNHEIVPSELVHRIASLKHGGTYKVLKNLLRYKLLHHDSSKYDG 70
+ K +R++ A+ + ++E VP +L+ A + +LK L +++ + Y+G
Sbjct: 10 MGKHSWRIMDAIFKNLWDYEYVPLQLISSHARIGEEKARNILKYLSDLRVVQNRQKDYEG 69
Query: 71 FRLTYLGYDFLAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSF 130
T++G ++ LV G A+G+ +G GKES +F E +K H++G TSF
Sbjct: 70 STFTFIGLSLYSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSF 129
Query: 131 RAVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQ 190
+ VK KRDY ++ L+ +A EF ++ L+ G VP + V+M L+
Sbjct: 130 KKVKEKRDY----GDLHFSVLAIRSARNEFRALQKLQ--GLAVPKVYAWEGNAVLMELID 183
Query: 191 GYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250
L +V +++NPD V + I+ V + G++H D +++N+++ +E + +IDFPQ V
Sbjct: 184 AKELYRV-RVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLV-SEEGIWIIDFPQSVE 241
Query: 251 VSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDID 292
V + + +RDV I +F + + T+ D S ID
Sbjct: 242 VGEEGWREILERDVRNIITYFSRTYR------TEKDINSAID 277
>sp|P34649|YOT3_CAEEL Putative RIO-type serine/threonine-protein kinase 3
OS=Caenorhabditis elegans GN=riok-3 PE=3 SV=1
Length = 510
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 106/207 (51%), Gaps = 20/207 (9%)
Query: 81 LAIKTLVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYL 140
L + +N+GVF +V + GKES + A++ T A+K+++ T+ K++ +Y+
Sbjct: 235 LLLLKWINQGVFDSVDGIIATGKESAVLHAAQDSATSYAIKVYK---TTLSEFKNRSEYV 291
Query: 141 ----RHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV--QGYPL 194
R +N L ++ A +EF + + HG P P V R+ ++MS + QG
Sbjct: 292 KDDFRFKNPRGVL---KIWAEREFMNLSRMAKHGLPCPQPVKVRRNVLVMSFLGDQGLAA 348
Query: 195 VQVNQLQ-------NPDSVFETIIGLVVRL-AEHGLIHCDFNEFNIMIDDDEKVTMIDFP 246
++ ++ +V++ + ++ R+ E L+H D +EFN+++ D KV +ID
Sbjct: 349 PRLKNVEWEFFTDDERRNVYDQVQSIMCRMYKECLLVHADLSEFNLLLTPDNKVHVIDVS 408
Query: 247 QMVSVSHQNAQMYFDRDVECIFKFFRK 273
Q + +SH + + RD++ I FF +
Sbjct: 409 QAMDLSHPRSLQFLTRDIQNIITFFTR 435
>sp|O28471|RIO1_ARCFU RIO-type serine/threonine-protein kinase Rio1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=rio1 PE=1 SV=1
Length = 258
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 22/205 (10%)
Query: 86 LVNRGVFTAVGRQLGVGKESDIFEV-AREDGTVLAM--KLHRLGRTSFRAVKSKRDYLRH 142
L +G TA+G + GKE+++F DG +AM K++R+ + F + +YL
Sbjct: 42 LSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMD---EYLYG 98
Query: 143 RNSYNWLYLSR-----LAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV-----QGY 192
++ +S + KEF ++ ++ G VP ++ ++M +
Sbjct: 99 DERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAP 158
Query: 193 PLVQV-NQLQNPD--SVFETIIGLVVRL-AEHGLIHCDFNEFNIMIDDDEKVTMIDFPQM 248
LV++ +L+ D +F ++ V RL E L+H D +E+NIM D KV ID Q
Sbjct: 159 TLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQA 216
Query: 249 VSVSHQNAQMYFDRDVECIFKFFRK 273
V++ H A+ Y +RDV I +FF K
Sbjct: 217 VTLRHPMAESYLERDVRNIIRFFSK 241
>sp|O42650|RIO1_SCHPO Serine/threonine-protein kinase rio1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rio1 PE=3 SV=2
Length = 497
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 19/203 (9%)
Query: 86 LVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYL----R 141
L+N G + + + GKE++++ EDG A+K++ +TS K + Y+ R
Sbjct: 113 LINNGTISEINGCISTGKEANVYHATNEDGKHFAIKIY---KTSILVFKDRDRYVSGEFR 169
Query: 142 HRNSY---NWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV-----QGYP 193
R+ Y N + RL A KE +K + G P P + +H ++MS + YP
Sbjct: 170 FRHGYNKRNPRKMVRLWAEKEIRNLKRVAAAGIPCPEPILLKQHVLLMSFLGDKKGWAYP 229
Query: 194 -LVQVNQLQNPDSVFETIIGLVVRLAEH--GLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250
L ++ + ++ +R+ H L+H D +E+N++ KV ID Q V
Sbjct: 230 KLKDIDMTPGEATKLYQLVARNMRILFHVCHLVHADLSEYNLLYHKG-KVYFIDVSQSVE 288
Query: 251 VSHQNAQMYFDRDVECIFKFFRK 273
H + + D+ I FFR+
Sbjct: 289 HDHPQSIDFLRMDILNISTFFRR 311
>sp|Q9DBU3|RIOK3_MOUSE Serine/threonine-protein kinase RIO3 OS=Mus musculus GN=Riok3 PE=2
SV=3
Length = 519
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 81 LAIKTLVNRGVFTAVGRQLGVGKESDIF-------EVAREDGTVLAMKLH-RLGRTSFRA 132
L + +VN G+ + + GKES +F E +EDG + + ++ +T+
Sbjct: 239 LLMYKMVNSGMLETITGCISTGKESVVFHAYGGSLEDEKEDGKAIPTECAIKVFKTTLNE 298
Query: 133 VKSKRDYL----RHRNSYNWL---YLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVI 185
K++ Y+ R ++ ++ L + R+ A KE + ++ G P P V +H ++
Sbjct: 299 FKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQKAGIPCPTVVLLKKHILV 358
Query: 186 MSLVQGYPLVQVNQLQN--------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237
MS + G+ V +L+ D+ ++T+ + E L+H D +E+N M+
Sbjct: 359 MSFI-GHDQVPAPKLKEVKLSNEEMKDAYYQTLHLMQQLYNECTLVHADLSEYN-MLWHA 416
Query: 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273
KV +ID Q V +H + + RD + +FF+K
Sbjct: 417 GKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK 452
>sp|Q1RMT7|RIOK3_BOVIN Serine/threonine-protein kinase RIO3 OS=Bos taurus GN=RIOK3 PE=2
SV=1
Length = 519
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 81 LAIKTLVNRGVFTAVGRQLGVGKESDIF-------EVAREDGTVLAMKLH-RLGRTSFRA 132
L + +VN G+ + + GKES +F E +ED V+ + ++ +T+
Sbjct: 239 LLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDGKEDSKVIPTECAIKVFKTTLNE 298
Query: 133 VKSKRDYL----RHRNSYNWL---YLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVI 185
K++ Y+ R ++ ++ L + R+ A KE + ++ G P P V +H ++
Sbjct: 299 FKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLTRMQRAGIPCPTVVLLKKHILV 358
Query: 186 MSLVQGYPLVQVNQLQN--------PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDD 237
MS + G+ V +L+ D+ ++T+ + E L+H D +E+N M+
Sbjct: 359 MSFI-GHDQVPAPKLKEVKLSSEEMKDAYYQTLHLMQQLYDECTLVHADLSEYN-MLWHA 416
Query: 238 EKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273
KV +ID Q V +H + + RD + +FF+K
Sbjct: 417 GKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK 452
>sp|O14730|RIOK3_HUMAN Serine/threonine-protein kinase RIO3 OS=Homo sapiens GN=RIOK3 PE=1
SV=2
Length = 519
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 81 LAIKTLVNRGVFTAVGRQLGVGKESDIF-------EVAREDGTVLAMKLH-RLGRTSFRA 132
L + +VN G+ + + GKES +F E +ED V+ + ++ +T+
Sbjct: 239 LLMYKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKEDSKVIPTECAIKVFKTTLNE 298
Query: 133 VKSKRDYL----RHRNSYNWL---YLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVI 185
K++ Y+ R ++ ++ L + R+ A KE + ++ G P P V +H ++
Sbjct: 299 FKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHILV 358
Query: 186 MSLV-------QGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDE 238
MS + V++N + ++ ++T+ + E L+H D +E+N M+
Sbjct: 359 MSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYN-MLWHAG 417
Query: 239 KVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273
KV +ID Q V +H + + RD + +FF+K
Sbjct: 418 KVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK 452
>sp|Q12196|RIO1_YEAST Serine/threonine-protein kinase RIO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RIO1 PE=1 SV=1
Length = 484
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 83 IKTLVNRGVFTAVGRQLGVGKESDI-------------------FEVAREDGTVLAMKLH 123
+K++V RGV + L GKE+++ +EV DG+ +
Sbjct: 66 LKSMVTRGVIADLNGCLSTGKEANVYHAFAGTGKAPVIDEETGQYEVLETDGSRAEYAI- 124
Query: 124 RLGRTSFRAVKSKRDYL----RHRNS---YNWLYLSRLAALKEFAFMKALEDHG-FPVPN 175
++ +TS K + Y+ R RNS +N + ++ A KEF +K + G P P
Sbjct: 125 KIYKTSILVFKDRERYVDGEFRFRNSRSQHNPRKMIKIWAEKEFRNLKRIYQSGVIPAPK 184
Query: 176 AVDCNRHCVIMSLVQ-----GYPLVQVNQLQNPDSVF---ETIIGLVVRLAE-HGLIHCD 226
++ + ++M + P ++ +N D +F T++ + L + L+H D
Sbjct: 185 PIEVKNNVLVMEFLSRGNGFASPKLKDYPYKNRDEIFHYYHTMVAYMRLLYQVCRLVHAD 244
Query: 227 FNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273
+E+N ++ DD K+ MID Q V H + + D++ + +F K
Sbjct: 245 LSEYNTIVHDD-KLYMIDVSQSVEPEHPMSLDFLRMDIKNVNLYFEK 290
>sp|Q03021|RIO1_THEAC RIO-type serine/threonine-protein kinase Rio1 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=rio1 PE=3 SV=1
Length = 186
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 118 LAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSR-----LAALKEFAFMKALEDHGFP 172
+A+K+ ++ F ++ R Y+ ++ + + R + KE+ + ALE+ P
Sbjct: 12 VAVKIFKMSTLKFMSI---RKYIEGDQRFSKIRIDRNDIVPVWVRKEYTNLMALENAHVP 68
Query: 173 VPNAVDCNRHCVIMSLV--QGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEF 230
P + ++ ++MS + + P Q+ ++ + +++ +I + R+ + ++H D +E+
Sbjct: 69 APKPIGFFKNILVMSYIGTKSGPAPQLKDVEIDEGIYDQVIDGMRRMYANRIVHADLSEY 128
Query: 231 NIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRK 273
N++ KV ID Q V + H A + +RD+ + FF+K
Sbjct: 129 NMLFH--RKVYFIDLAQAVDMDHPMAAEFLERDIVNVSNFFQK 169
>sp|Q9BRS2|RIOK1_HUMAN Serine/threonine-protein kinase RIO1 OS=Homo sapiens GN=RIOK1 PE=1
SV=2
Length = 568
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 86 LVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYL----R 141
++ RG+ T + + GKE++++ + +G A+K++ +TS K + Y+ R
Sbjct: 173 MLTRGIITEINGCISTGKEANVYHASTANGESRAIKIY---KTSILVFKDRDKYVSGEFR 229
Query: 142 HRNSY---NWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV----QGYPL 194
R+ Y N + + A KE + L P P + H ++MS + PL
Sbjct: 230 FRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPL 289
Query: 195 VQVNQLQNPDS--VFETIIGLVVRLAEHG-LIHCDFNEFNIMIDDDEKVTMIDFPQMVSV 251
++ QL + ++ +I + R+ + L+H D +EFN M+ V +ID Q V
Sbjct: 290 LKNVQLSESKARELYLQVIQYMRRMYQDARLVHADLSEFN-MLYHGGGVYIIDVSQSVEH 348
Query: 252 SHQNAQMYFDRDVECIFKFF 271
H +A + +D + FF
Sbjct: 349 DHPHALEFLRKDCANVNDFF 368
>sp|Q57886|RIO1_METJA RIO-type serine/threonine-protein kinase Rio1 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=rio1 PE=3 SV=1
Length = 290
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 102 GKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLSRLAAL---- 157
GKE+ +F+ AR+ A+K++R+ F+ + Y++ ++ SR +
Sbjct: 85 GKEAVVFK-ARKGKFYRAVKVYRVATCDFKTMSK---YIQGDPRFHLRKSSRRQIIHAWV 140
Query: 158 -KEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV--QGYPLVQVNQLQNPD--SVFETIIG 212
KEF ++ + P A + ++M V +G P ++ +Q+ D F+ I
Sbjct: 141 EKEFRNLRRASE-IINAPKARLRRENVLVMDFVGYRGIPAPKLKDMQDLDWEKYFKIIKE 199
Query: 213 LVVRLAEHG-LIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFF 271
+ +L E G L+H D +E+NI++ DDE V IDF Q V H A RD I FF
Sbjct: 200 SMKKLYEEGELVHGDLSEYNILVKDDEPV-FIDFSQSVITQHPLAHPLLIRDCINICNFF 258
Query: 272 -RKRFHLNFQETTDGDDGSDIDT 293
RKR N+++ G +ID
Sbjct: 259 RRKRVDCNYKDLYKYITGKEIDP 281
>sp|Q54VD8|RIO1_DICDI Serine/threonine-protein kinase rio1 OS=Dictyostelium discoideum
GN=rio1 PE=3 SV=1
Length = 574
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 92/200 (46%), Gaps = 12/200 (6%)
Query: 86 LVNRGVFTAVGRQLGVGKESDIFEVAREDGTVLAMKLHRLGRTSF----RAVKSKRDYLR 141
++N+G F+ + + GKE++++ + A+K+++ F R V + + R
Sbjct: 176 MINKGAFSEINGCISTGKEANVYHAFTPNEEERAVKVYKTSILVFKDRDRYVTGEFRFRR 235
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV--QGYPLVQVNQ 199
+ +N + ++ A KEF + L++ G P P + H ++M+ + GY ++
Sbjct: 236 GYSKHNPRKMVKVWAEKEFRNLTRLKNAGIPCPTPLILRNHILVMTFIGKDGYAAPRLKD 295
Query: 200 LQNPDSVFETIIGLVVRLA-----EHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQ 254
F I +++ + L+H D +E+N++ ++ + +ID Q V H
Sbjct: 296 ATVSQEKFGVIYLDCIKMMRTLFHKCRLVHADLSEYNMLYYKNQ-LYIIDVSQSVEHDHP 354
Query: 255 NAQMYFDRDVECIFKFFRKR 274
++ + D + FFRK+
Sbjct: 355 HSLDFLRMDCSNVTDFFRKK 374
>sp|Q8SVI7|RIO1_ENCCU Probable serine/threonine-protein kinase RIO1 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=RIO1 PE=3
SV=1
Length = 409
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 101/223 (45%), Gaps = 33/223 (14%)
Query: 83 IKTLVNRGVFTAVGRQLGVGKESDIF---------------------EVAREDGTV-LAM 120
++ L RG + L GKES+++ E RE V + +
Sbjct: 53 LERLQARGKLVNLQGSLCTGKESNVYLGEASTSLCSKFIKNRYSVTEEPGREGQIVPVVV 112
Query: 121 KLHRLGRTSFR----AVKSKRDYLRHRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNA 176
K+ + SFR ++S++ + R S N L ++ A KE +K L + G P P
Sbjct: 113 KIFKTSIMSFRDRERYIRSEKRFQRFCTS-NSRKLIKVWAEKEVRNLKRLNNAGIPSPEP 171
Query: 177 VDCNRHCVIMSLV----QGYPLVQVNQLQNPDSVFETIIGLVVRL-AEHGLIHCDFNEFN 231
+ + ++M+ + + P ++ +++ + ++ + ++ + + GL+H D +EFN
Sbjct: 172 IYLKNNILVMTQIGRCSEVAPRLRDASIKDLEGCYQQCVKIIRDMYKKAGLVHADLSEFN 231
Query: 232 IMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKR 274
++ + V +ID Q V + H NAQ + D+ I FF ++
Sbjct: 232 LLYFEGV-VYVIDVGQSVEIDHDNAQRFLIMDINNINSFFSRK 273
>sp|Q922Q2|RIOK1_MOUSE Serine/threonine-protein kinase RIO1 OS=Mus musculus GN=Riok1 PE=2
SV=2
Length = 567
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 99 LGVGKESDIFEVAREDGTVLAMKLHRLGRTSFRAVKSKRDYL----RHRNSY---NWLYL 151
+ GKE++++ + G A+K+++ TS K + Y+ R R Y N +
Sbjct: 185 ISTGKEANVYYASTPSGESRAIKIYK---TSILMFKDRDKYVTGEFRFRRGYCKGNPRKM 241
Query: 152 SRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLV----QGYPLVQVNQLQNPDS-- 205
R A KE + L+ P P + H ++M + PL++ QL +
Sbjct: 242 VRTWAEKEMRNLCRLKTANIPCPEPIRLRSHVLLMGFIGKDDMPAPLLKNVQLSESKARE 301
Query: 206 VFETIIGLVVRLAEHG-LIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDV 264
++ +I + ++ + L+H D +EFN++ + V +ID Q V H +A + +D
Sbjct: 302 LYLQVIQYMRKMYQDARLVHADLSEFNMLYHGGD-VYIIDVSQSVEHDHPHALEFLRKDC 360
Query: 265 ECIFKFFRK 273
+ FF K
Sbjct: 361 TNVNDFFSK 369
>sp|Q5H410|KDKA_XANOR 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas oryzae pv.
oryzae (strain KACC10331 / KXO85) GN=kdkA PE=3 SV=1
Length = 249
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 137 RDYLR-------HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NR 181
R YLR R+ Y W R + EF M+ L PVP + R
Sbjct: 70 RQYLRGGMAARVSRDRYLWKGAGRTRSFAEFRLMRELIKRKLPVPRPLAACYLREGLGYR 129
Query: 182 HCVIMSLVQGY-PLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
++M ++ L QL + +E L+ R GL H D N NI+ D
Sbjct: 130 AALLMERLENVRSLADHAQLAGRGAPWEATGQLIARFHRAGLDHPDLNAHNILFDAGGHG 189
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294
+IDF + V A + +R++ KR H + + G D+D D
Sbjct: 190 WLIDFDR--GVLRIPATRWRERNL--------KRLHRSLLKLRGNRSGEDVDKD 233
>sp|B2SLU1|KDKA_XANOP 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas oryzae pv.
oryzae (strain PXO99A) GN=kdkA PE=3 SV=1
Length = 249
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 137 RDYLR-------HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NR 181
R YLR R+ Y W R + EF M+ L PVP + R
Sbjct: 70 RQYLRGGMAARVSRDRYLWKGAGRTRSFAEFRLMRELIKRKLPVPRPLAACYLREGLGYR 129
Query: 182 HCVIMSLVQGY-PLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
++M ++ L QL + +E L+ R GL H D N NI+ D
Sbjct: 130 AALLMERLENVRSLADHAQLAGRGAPWEATGQLIARFHRAGLDHPDLNAHNILFDAGGHG 189
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294
+IDF + V A + +R++ KR H + + G D+D D
Sbjct: 190 WLIDFDR--GVLRIPATRWRERNL--------KRLHRSLLKLRGNRSGEDVDKD 233
>sp|Q2P6W5|KDKA_XANOM 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=kdkA PE=3 SV=1
Length = 249
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 137 RDYLR-------HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NR 181
R YLR R+ Y W R + EF M+ L PVP + R
Sbjct: 70 RQYLRGGMAARVSRDRYLWKGAGRTRSFAEFRLMRELIKRKLPVPRPLAACYLREGLGYR 129
Query: 182 HCVIMSLVQGY-PLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
++M ++ L QL + +E L+ R GL H D N NI+ D
Sbjct: 130 AALLMERLENVRSLADHAQLAGRGAPWEATGQLIARFHRAGLDHPDLNAHNILFDAGGHG 189
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294
+IDF + V A + +R++ KR H + + G D+D D
Sbjct: 190 WLIDFDR--GVLRIPATRWRERNL--------KRLHRSLLKLRGNRSGEDVDKD 233
>sp|Q9PBJ1|KDKA_XYLFA 3-deoxy-D-manno-octulosonic acid kinase OS=Xylella fastidiosa
(strain 9a5c) GN=kdkA PE=3 SV=2
Length = 249
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN--------RHCVIMSLVQGYP 193
+R+ Y W R ++ EF M+ L G PVP + R ++M ++G
Sbjct: 82 NRDRYFWCGGHRTRSVLEFRLMRELISRGLPVPTPLAACYVRYGVQYRAAILMERLEGVS 141
Query: 194 -LVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
L + + ++ +E I ++ R GL H D N NI++D + +IDF
Sbjct: 142 SLAMCVRGNSKETHWEQIGRMISRFHREGLDHADLNAHNILLDQAGQCWLIDF 194
>sp|B0U358|KDKA_XYLFM 3-deoxy-D-manno-octulosonic acid kinase OS=Xylella fastidiosa
(strain M12) GN=kdkA PE=3 SV=1
Length = 249
Score = 48.1 bits (113), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 15/116 (12%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQ 201
+R+ Y W R ++ EF M+ L G PVP + C + VQ + + +L+
Sbjct: 82 NRDRYFWCGGHRTRSVLEFRLMRELISRGLPVPTPLAA---CYVRYGVQYRAAILIERLE 138
Query: 202 NPDSV------------FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
S+ +E I ++ R GL H D N NI++D + +IDF
Sbjct: 139 GVSSLAMCIRGNSKETHWEQIGRMISRFHREGLDHADLNAHNILLDPAGQCWLIDF 194
>sp|Q87C81|KDKA_XYLFT 3-deoxy-D-manno-octulosonic acid kinase OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=kdkA PE=3 SV=2
Length = 249
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN--------RHCVIMSLVQGYP 193
+R+ Y W R ++ EF M+ L G PVP + R ++M ++G
Sbjct: 82 NRDRYFWCGGHRTRSVLEFRLMRELISRGLPVPTPLAACYVRHGVQYRAAILMERLEGVS 141
Query: 194 LVQVNQLQNPDSV-FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
+ + N + +E I ++ R GL H D N NI++D + +IDF
Sbjct: 142 SLAMCVRGNSKEIHWEQIGRMISRFHREGLDHADLNAHNILLDQAGQCWLIDF 194
>sp|B2I5R8|KDKA_XYLF2 3-deoxy-D-manno-octulosonic acid kinase OS=Xylella fastidiosa
(strain M23) GN=kdkA PE=3 SV=1
Length = 249
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 9/113 (7%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN--------RHCVIMSLVQGYP 193
+R+ Y W R ++ EF M+ L G PVP + R ++M ++G
Sbjct: 82 NRDRYFWCGGHRTRSVLEFRLMRELISRGLPVPTPLAACYVRHGVQYRAAILMERLEGVS 141
Query: 194 LVQVNQLQNPDSV-FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
+ + N + +E I ++ R GL H D N NI++D + +IDF
Sbjct: 142 SLAMCVRGNSKEIHWEQIGRMISRFHREGLDHADLNAHNILLDQAGQCWLIDF 194
>sp|B2FR65|KDKA_STRMK 3-deoxy-D-manno-octulosonic acid kinase OS=Stenotrophomonas
maltophilia (strain K279a) GN=kdkA PE=3 SV=1
Length = 249
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 11/135 (8%)
Query: 144 NSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN--------RHCVIMSLVQGY-PL 194
+ Y W R + EF M+AL + PVP + R ++M ++G L
Sbjct: 84 DQYLWRGSDRTRSFAEFRLMRALREKKLPVPRPIAAYYMREGLRYRAAILMERIEGVRSL 143
Query: 195 VQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQ 254
+ + +E L+ R GL H D N NI+ D + +IDF + V
Sbjct: 144 ADRALVAGRGAPWEETGRLIARFHRAGLDHADLNAHNILFDGNGHGWLIDFDR--GVIRI 201
Query: 255 NAQMYFDRDVECIFK 269
A + +R+++ + +
Sbjct: 202 PATAWRERNLKRLLR 216
>sp|B4SLP5|KDKA_STRM5 3-deoxy-D-manno-octulosonic acid kinase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=kdkA PE=3 SV=1
Length = 249
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 11/135 (8%)
Query: 144 NSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NRHCVIMSLVQGY-PL 194
+ Y W R + EF M+AL + PVP + R ++M ++G L
Sbjct: 84 DQYLWRGADRTRSFAEFRLMRALREKKLPVPRPLAAFYMREGLRYRAAILMERIEGVRSL 143
Query: 195 VQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVSVSHQ 254
+ + +E L+ R GL H D N NI+ D + +IDF + V
Sbjct: 144 ADRALVAGRGAPWEETGRLIARFHRAGLDHADLNAHNILFDGNGHGWLIDFDR--GVIRI 201
Query: 255 NAQMYFDRDVECIFK 269
A + +R+++ + +
Sbjct: 202 PATAWRERNLKRLLR 216
>sp|Q8PNH3|KDKA_XANAC 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=kdkA PE=3 SV=1
Length = 249
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 26/174 (14%)
Query: 137 RDYLR-------HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NR 181
R YLR R+ Y W R + EF M+ L PVP + R
Sbjct: 70 RQYLRGGMAARVSRDRYLWKGAGRTRSFAEFRLMRELIKRKLPVPRPLAACYLREGLGYR 129
Query: 182 HCVIMSLVQGY-PLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
++M ++ L + Q+ + +E L+ R GL H D N NI+ D
Sbjct: 130 AALLMERLENVRSLAEHAQVAGRGAPWEATGQLIARFHRAGLDHADLNAHNILFDAGGHG 189
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294
+IDF + V A + +R++ KR H + + D+D D
Sbjct: 190 WLIDFDR--GVLRIPATRWRERNL--------KRLHRSLLKLRGNRSREDVDKD 233
>sp|Q87T74|KDKA_VIBPA 3-deoxy-D-manno-octulosonic acid kinase OS=Vibrio parahaemolyticus
serotype O3:K6 (strain RIMD 2210633) GN=kdkA PE=3 SV=1
Length = 238
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 17/103 (16%)
Query: 173 VPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNI 232
+PNA D ++S++Q PL P+ +++ I + ++ G+ H D N NI
Sbjct: 128 IPNARD------LVSILQEKPL--------PEGMYQKIGQEIAKMHNAGVNHTDLNIHNI 173
Query: 233 MIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRF 275
+IDD +KV +IDF + H + + +++E + + F+K
Sbjct: 174 LIDDKDKVWIIDFDKCRKQEHGD---WKKQNLERLLRSFKKEL 213
>sp|Q9KVB9|KDKA_VIBCH 3-deoxy-D-manno-octulosonic acid kinase OS=Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=kdkA
PE=3 SV=2
Length = 235
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Query: 109 EVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRH-----------RNSYNWLYLSRLAAL 157
E +++G VL R G T F ++ + LRH +SY + + +
Sbjct: 30 EFWQQNGKVLGSATGR-GTTWFVQLQQTQGALRHYRRGGLFGKLVADSYWFTGWEKTRSY 88
Query: 158 KEFAFMKALEDHGF--PVPNAVDCNRHCVIMS---LVQGYP----LVQVNQLQNP--DSV 206
+EF + L D G P P A +H ++ L + P LV + Q ++P D +
Sbjct: 89 QEFMLLNHLRDAGVNVPRPIAARVQKHGLLYKADLLSEKVPNARDLVSILQ-ESPISDEL 147
Query: 207 FETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
+ I + ++ + + H D N NI+IDD EKV +IDF
Sbjct: 148 YRKIGREIRKMHDAQVNHTDLNIHNILIDDQEKVWIIDF 186
>sp|Q3BWM9|KDKA_XANC5 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=kdkA PE=3 SV=1
Length = 249
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 64/174 (36%), Gaps = 26/174 (14%)
Query: 137 RDYLR-------HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NR 181
R YLR R+ Y W R + EF M+ L PVP + R
Sbjct: 70 RQYLRGGMAARVSRDRYLWKGAGRTRSFAEFRLMRELIKRKLPVPRPLAACYLREGVGYR 129
Query: 182 HCVIMSLVQGY-PLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKV 240
++M ++ L Q+ + +E L+ R GL H D N NI+ D
Sbjct: 130 AALLMERLENVRSLADHAQVAGRGAPWEATGQLIARFHRAGLDHADLNAHNILFDAGGHG 189
Query: 241 TMIDFPQMVSVSHQNAQMYFDRDVECIFKFFRKRFHLNFQETTDGDDGSDIDTD 294
+IDF + V A + +R++ KR H + + D+D D
Sbjct: 190 WLIDFDR--GVLRIPATRWRERNL--------KRLHRSLLKLRGNRSREDVDKD 233
>sp|Q8PBX3|KDKA_XANCP 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas campestris
pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=kdkA PE=3 SV=1
Length = 249
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 143 RNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NRHCVIMSLVQGY-P 193
R+ Y W R + EF M+ L PVP + R ++M ++
Sbjct: 83 RDQYLWKGAGRTRSFAEFRLMRELLKRKLPVPRPLAACYLREGLGYRAALLMERLENVRS 142
Query: 194 LVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249
L Q+ + +E L+ R GL H D N NI+ D +IDF + V
Sbjct: 143 LADHAQVAGRGAPWEDTGRLIARFHRAGLDHADLNAHNILFDAGGHGWLIDFDRGV 198
>sp|B0RTE2|KDKA_XANCB 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas campestris
pv. campestris (strain B100) GN=kdkA PE=3 SV=1
Length = 249
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 143 RNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NRHCVIMSLVQGY-P 193
R+ Y W R + EF M+ L PVP + R ++M ++
Sbjct: 83 RDQYLWKGAGRTRSFAEFRLMRELLKRKLPVPRPLAACYLREGLGYRAALLMERLENVRS 142
Query: 194 LVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249
L Q+ + +E L+ R GL H D N NI+ D +IDF + V
Sbjct: 143 LADHAQVAGRGAPWEDTGRLIARFHRAGLDHADLNAHNILFDAGGHGWLIDFDRGV 198
>sp|Q4URM8|KDKA_XANC8 3-deoxy-D-manno-octulosonic acid kinase OS=Xanthomonas campestris
pv. campestris (strain 8004) GN=kdkA PE=3 SV=1
Length = 249
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 9/116 (7%)
Query: 143 RNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDC--------NRHCVIMSLVQGY-P 193
R+ Y W R + EF M+ L PVP + R ++M ++
Sbjct: 83 RDQYLWKGAGRTRSFAEFRLMRELLKRKLPVPRPLAACYLREGLGYRAALLMERLENVRS 142
Query: 194 LVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMV 249
L Q+ + +E L+ R GL H D N NI+ D +IDF + V
Sbjct: 143 LADHAQVAGRGAPWEDTGRLIARFHRAGLDHADLNAHNILFDAGGHGWLIDFDRGV 198
>sp|Q8SVD9|BUD12_ENCCU Probable serine/threonine-protein kinase BUD32 homolog
OS=Encephalitozoon cuniculi (strain GB-M1) GN=BUD32 PE=3
SV=1
Length = 197
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 158 KEFAFMKALEDHGFPVPNAVDCNRHCVIMSLVQGYPLVQ-VNQLQNPDSVFETIIGLVVR 216
+E ++ LE G P P + ++M V+G L + ++ NP ++F + LV R
Sbjct: 44 REAKILRKLEALGIPAPRLISTYGDTIVMEKVEGTVLKEMIDSSDNPGALFRDLGALVSR 103
Query: 217 LAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
L +IH D N + K+ IDF
Sbjct: 104 LHIADIIHGDLTTSNFI--HGSKIYAIDF 130
>sp|Q3UGM2|NEK10_MOUSE Serine/threonine-protein kinase Nek10 OS=Mus musculus GN=Nek10 PE=2
SV=2
Length = 1111
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 35/171 (20%)
Query: 94 AVGRQLGVGKESDIFEVAREDG-TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLS 152
AV LG G +++V + G +LAMK L +F K K+D R+S +S
Sbjct: 520 AVLDHLGSGAFGCVYKVRKRSGQNLLAMKEVNLHNPAFG--KDKKD----RDSSVKNIVS 573
Query: 153 RLAALKEFAFMKALEDHGFPVPNAV-------DCNRHCVIMSLVQGYPLVQ-VNQLQ--- 201
L +KE + PN V + +R ++M L++G PL + N L+
Sbjct: 574 ELTIIKEQLYH----------PNVVRYYKTFLENDRLYIVMELIEGAPLGEHFNSLKEKH 623
Query: 202 ---NPDSVFETIIGLVVRL----AEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
+ + +++ I L + L E ++H D NIM+ D +KVT+ DF
Sbjct: 624 HHFSEERLWKIFIQLCLALRYLHKEKRIVHRDLTPNNIMLGDKDKVTVTDF 674
>sp|P54737|PKN5_MYXXA Serine/threonine-protein kinase pkn5 OS=Myxococcus xanthus GN=pkn5
PE=2 SV=1
Length = 380
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 220 HGLIHCDFNEFNIMIDDDEKVTMIDF 245
HGL+H D NIM+DDD +V ++DF
Sbjct: 238 HGLVHRDLKPSNIMVDDDRQVRLMDF 263
>sp|Q8TJS2|KAE1B_METAC Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis
protein OS=Methanosarcina acetivorans (strain ATCC 35395
/ DSM 2834 / JCM 12185 / C2A) GN=MA_3705 PE=3 SV=1
Length = 547
Score = 36.6 bits (83), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 15/97 (15%)
Query: 170 GFPVPNAVDCNRHCVIMSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNE 229
G P P D + M ++G P + L P+ + E + LV RL G++H D
Sbjct: 412 GVPTPIIYDIEEFKLKMQFIEGVP---IKYLITPE-LSEKVGELVGRLHSSGIVHGDLTT 467
Query: 230 FNIMIDDDEKVTMIDFPQMVSVSHQNAQMYFDRDVEC 266
N+++ E++ +IDF YFD+ +E
Sbjct: 468 SNLLL-AGERLYLIDF----------GLAYFDKSLEA 493
>sp|A5UG81|KDKA_HAEIG 3-deoxy-D-manno-octulosonic acid kinase OS=Haemophilus influenzae
(strain PittGG) GN=kdkA PE=3 SV=1
Length = 241
Score = 36.2 bits (82), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 151 LSRLAALKEFAFMKALEDHGFPVPNAVD----------CNRHCVIMSLVQG----YPLVQ 196
L + EF ++ L + GFPVP + C + ++ ++ L+Q
Sbjct: 84 LETTRSFAEFHLLQRLYEAGFPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQ 143
Query: 197 VNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIM---IDDDEKVTMIDF 245
L P + I L+ +L + + H D N NI+ I+ ++K ++DF
Sbjct: 144 TQTL--PKETWTQIGRLIRKLHDLQICHTDLNAHNILLQQIEQEQKCWLLDF 193
>sp|A6VQT5|KDKA_ACTSZ 3-deoxy-D-manno-octulosonic acid kinase OS=Actinobacillus
succinogenes (strain ATCC 55618 / 130Z) GN=kdkA PE=3
SV=1
Length = 240
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVDCN---------RHCVIMSLVQ-G 191
+R+ Y + L + EF + L G PVP + R ++ V+
Sbjct: 75 NRDRYTFTSLENTRSFAEFRLLSRLHQAGMPVPKPLAAKVEKLSLGGYRADILTEKVENA 134
Query: 192 YPLVQVNQLQN-PDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID---DDEKVTMIDF 245
L + Q +N D + I L+ RL + + H D N NI++ + EK ++DF
Sbjct: 135 RDLTALLQTENLSDEAWRQIGKLIRRLHDLQICHTDLNAHNILVQQVKEQEKYWLLDF 192
>sp|Q6ZWH5|NEK10_HUMAN Serine/threonine-protein kinase Nek10 OS=Homo sapiens GN=NEK10 PE=2
SV=3
Length = 1172
Score = 35.8 bits (81), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 35/171 (20%)
Query: 94 AVGRQLGVGKESDIFEVAREDG-TVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNWLYLS 152
A+ LG G +++V + G +LAMK L +F K RD RN +S
Sbjct: 520 AILDHLGSGAFGCVYKVRKHSGQNLLAMKEVNLHNPAFGKDKKDRDS-SVRN-----IVS 573
Query: 153 RLAALKEFAFMKALEDHGFPVPNAV-------DCNRHCVIMSLVQGYPLVQ-VNQLQ--- 201
L +KE + PN V + +R ++M L++G PL + + L+
Sbjct: 574 ELTIIKEQLYH----------PNIVRYYKTFLENDRLYIVMELIEGAPLGEHFSSLKEKH 623
Query: 202 ---NPDSVFETIIGLVVRL----AEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
+ +++ I L + L E ++H D NIM+ D +KVT+ DF
Sbjct: 624 HHFTEERLWKIFIQLCLALRYLHKEKRIVHRDLTPNNIMLGDKDKVTVTDF 674
>sp|Q9R0G8|NRK_MOUSE Nik-related protein kinase OS=Mus musculus GN=Nrk PE=1 SV=2
Length = 1455
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 20/187 (10%)
Query: 90 GVFTAVGRQLGVGKESDIF-EVAREDGTVLAMKLHRLGRTSFRAVKSKRDYLRHRNSYNW 148
G+F+ + + +G+G IF + + G+++A+K+ +T + + +++ S W
Sbjct: 23 GIFS-LDKAIGLGTYGRIFLGIHEKTGSLVAVKVMSARKTPLPEIGRRVRVNKYQKSVGW 81
Query: 149 LY-------LSRLAALKEFAFMKALED-HG--FPVPNAVDCNRHCVIMSLVQGYPLVQVN 198
Y + L L++++F K + +G F + ++ ++M L + V
Sbjct: 82 RYSDEEEDLRTELNLLRKYSFHKNIVTFYGAFFKLNPPGHQHQLWMVMELCAAGSVTDVV 141
Query: 199 QLQNPDSVFETIIGLVVR--------LAEHGLIHCDFNEFNIMIDDDEKVTMIDFPQMVS 250
++ S+ E I + R L H +IH D N+++ D +V ++DF
Sbjct: 142 RMTRNQSLKEDWIAYICREILQGLAHLHAHQVIHRDIKGQNVLLTHDAEVKIVDFGVSAQ 201
Query: 251 VSHQNAQ 257
VS N +
Sbjct: 202 VSRTNGR 208
>sp|Q4QNS8|KDKA_HAEI8 3-deoxy-D-manno-octulosonic acid kinase OS=Haemophilus influenzae
(strain 86-028NP) GN=kdkA PE=3 SV=1
Length = 241
Score = 35.0 bits (79), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 19/121 (15%)
Query: 142 HRNSYNWLYLSRLAALKEFAFMKALEDHGFPVPNAVD----------CNRHCVIMSLVQG 191
+++ Y + L + EF ++ L + G PVP + C + ++ ++
Sbjct: 75 NKDRYRFSALETTRSFAEFHLLQRLYEAGLPVPKPIAARIQKGKLGICYQADILTEKIEN 134
Query: 192 ----YPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMI---DDDEKVTMID 244
L+Q L P + I L+ +L + + H D N NI++ + ++K +ID
Sbjct: 135 AQDLTALLQTQTL--PKETWRQIGRLIRKLHDLQICHTDLNAHNILLQQAEQEQKCWLID 192
Query: 245 F 245
F
Sbjct: 193 F 193
>sp|Q3YTH2|OSPG_SHISS Protein kinase OspG OS=Shigella sonnei (strain Ss046) GN=ospG PE=3
SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 186 MSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTMID 244
M V G PL ++ PD++ + L+ +L E +IH D N N++ D + E + ID
Sbjct: 98 MLRVPGTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPID 157
Query: 245 F 245
F
Sbjct: 158 F 158
>sp|Q99PZ6|OSPG_SHIFL Protein kinase OspG OS=Shigella flexneri GN=ospG PE=1 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 186 MSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTMID 244
M V G PL ++ PD++ + L+ +L E +IH D N N++ D + E + ID
Sbjct: 98 MLRVPGTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPID 157
Query: 245 F 245
F
Sbjct: 158 F 158
>sp|D2AJU3|OSPG_SHIF2 Protein kinase OspG OS=Shigella flexneri serotype X (strain
2002017) GN=ospG PE=3 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 186 MSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTMID 244
M V G PL ++ PD++ + L+ +L E +IH D N N++ D + E + ID
Sbjct: 98 MLRVPGTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPID 157
Query: 245 F 245
F
Sbjct: 158 F 158
>sp|Q326Z4|OSPG_SHIDS Protein kinase OspG OS=Shigella dysenteriae serotype 1 (strain
Sd197) GN=ospG PE=3 SV=1
Length = 196
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 186 MSLVQGYPLVQVNQLQNPDSVFETIIGLVVRLAEHGLIHCDFNEFNIMID-DDEKVTMID 244
M V G PL ++ PD++ + L+ +L E +IH D N N++ D + E + ID
Sbjct: 98 MLRVPGTPLSDIDTADIPDNIESLYLQLICKLNELSIIHYDLNTGNMLYDKESESLFPID 157
Query: 245 F 245
F
Sbjct: 158 F 158
>sp|Q6LVM6|KDKA_PHOPR 3-deoxy-D-manno-octulosonic acid kinase OS=Photobacterium profundum
GN=kdkA PE=3 SV=1
Length = 236
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 158 KEFAFMKALEDHGF--PVPNAVDCNRHCVIMS---LVQGYPLVQ--VNQLQN---PDSVF 207
+E A + L G P P A RH ++ LV+ + V+ LQ PD V+
Sbjct: 88 EEVALLSTLAVGGVNVPRPVAARATRHGLVYRADLLVEKIDSAKDLVDLLQQAMLPDHVW 147
Query: 208 ETIIGLVVRLAEHGLIHCDFNEFNIMIDDDEKVTMIDF 245
I V ++ + + H D N NI++D E V +IDF
Sbjct: 148 YAIGRTVRKMHDLQVCHTDLNAHNILVDSRELVWLIDF 185
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,315,053
Number of Sequences: 539616
Number of extensions: 5895459
Number of successful extensions: 23009
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 21263
Number of HSP's gapped (non-prelim): 1705
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)