Query         017459
Match_columns 371
No_of_seqs    302 out of 1776
Neff          6.7 
Searched_HMMs 13730
Date          Mon Mar 25 14:46:57 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017459.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/017459hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2qv7a1 e.52.1.2 (A:1-312) Dia 100.0 5.3E-30 3.9E-34  245.0  12.7  170   80-321     2-171 (312)
  2 d2bona1 e.52.1.2 (A:5-299) Lip 100.0 1.7E-29 1.3E-33  239.8  12.2  172   82-325     2-173 (295)
  3 d1u0ta_ e.52.1.1 (A:) Inorgani  96.6  0.0049 3.6E-07   56.7  10.5  131   81-231     1-138 (302)
  4 d1z0sa1 e.52.1.1 (A:1-249) Ino  93.4   0.067 4.9E-06   47.5   6.9   35  146-188    38-72  (249)
  5 d1o2da_ e.22.1.2 (A:) Alcohol   82.8     4.1  0.0003   36.8  11.1  102   81-194    29-146 (359)
  6 d1xmpa_ c.23.8.1 (A:) N5-CAIR   81.7       4 0.00029   32.9   9.3   68   92-168     9-78  (155)
  7 d1vlja_ e.22.1.2 (A:) NADH-dep  79.9     2.4 0.00018   38.9   8.4  103   80-194    34-152 (398)
  8 d1u11a_ c.23.8.1 (A:) N5-CAIR   75.5     9.6  0.0007   30.7   9.8   68   92-168    10-79  (159)
  9 d1o4va_ c.23.8.1 (A:) N5-CAIR   71.6      21  0.0015   28.9  11.1   69   92-168     8-77  (169)
 10 d1qcza_ c.23.8.1 (A:) N5-CAIR   70.1      13 0.00092   30.0   9.3   73   83-168     4-78  (163)
 11 d1jq5a_ e.22.1.2 (A:) Glycerol  65.9     6.3 0.00046   35.4   7.4   94   81-194    31-127 (366)
 12 d1ujna_ e.22.1.1 (A:) Dehydroq  64.6      12 0.00088   33.4   9.1   90   81-186    29-118 (347)
 13 d1oj7a_ e.22.1.2 (A:) Hypothet  58.3      16  0.0012   33.0   8.8  105   80-196    32-153 (390)
 14 d1v0ea2 b.108.1.3 (A:761-910)   49.2     2.6 0.00019   33.1   1.1   12  148-159    75-86  (150)
 15 d1rcua_ c.129.1.1 (A:) Hypothe  47.8      39  0.0028   26.7   8.6   32  149-186    37-68  (170)
 16 d1m3ga_ c.45.1.1 (A:) Mapk pho  47.8     4.4 0.00032   31.5   2.4   35   14-48     71-106 (145)
 17 d1mkpa_ c.45.1.1 (A:) Mapk pho  42.7     4.2 0.00031   31.4   1.5   34   15-48     74-108 (144)
 18 d3eeqa2 c.152.1.1 (A:8-214) Co  39.9      53  0.0039   27.1   8.4   92   80-196     7-110 (207)
 19 d1sg6a_ e.22.1.1 (A:) Dehydroq  38.4      25  0.0018   31.8   6.5   36  146-186   101-136 (389)
 20 d1ydhb_ c.129.1.1 (B:) Hypothe  37.5      16  0.0012   29.5   4.5   35  147-187    33-68  (181)
 21 d1pfka_ c.89.1.1 (A:) ATP-depe  36.3      25  0.0018   31.0   6.0   40  146-193    93-132 (320)
 22 d1t35a_ c.129.1.1 (A:) Hypothe  33.4      21  0.0015   28.7   4.5   36  147-188    32-68  (179)
 23 d1ohea2 c.45.1.1 (A:199-380) P  32.2     7.5 0.00054   31.6   1.4   34   15-48    100-134 (182)
 24 d1rrma_ e.22.1.2 (A:) Lactalde  31.2      62  0.0045   28.5   8.1  101   80-193    30-148 (385)
 25 d2q4oa1 c.129.1.1 (A:8-190) Hy  29.7      26  0.0019   28.2   4.5   35  147-187    37-72  (183)
 26 d1oboa_ c.23.5.1 (A:) Flavodox  29.3      95  0.0069   23.9   8.1  115   81-228     2-120 (169)
 27 d1vhqa_ c.23.16.2 (A:) Putativ  24.9      76  0.0055   25.9   6.9   48  146-201    84-150 (217)
 28 d1fpza_ c.45.1.1 (A:) Kinase a  24.3      13 0.00097   29.6   1.6   31   17-47    102-133 (176)
 29 d2djia3 c.36.1.9 (A:364-592) P  23.8      39  0.0028   28.0   4.7   23  146-168    68-90  (229)
 30 d1xfka_ c.42.1.1 (A:) Formimid  23.6      64  0.0047   27.9   6.4   47  147-193   107-154 (324)
 31 d1kq3a_ e.22.1.2 (A:) Glycerol  22.6      47  0.0035   28.9   5.4   42  146-194    82-125 (364)
 32 d2hsja1 c.23.10.3 (A:1-211) Un  22.0      38  0.0027   26.9   4.2   56  153-218    61-116 (211)
 33 d4pfka_ c.89.1.1 (A:) ATP-depe  21.7   1E+02  0.0076   26.6   7.5   40  147-194    93-132 (319)
 34 d1weka_ c.129.1.1 (A:) Hypothe  21.7      34  0.0025   28.1   3.8   34  147-186    64-97  (208)
 35 d1weha_ c.129.1.1 (A:) Hypothe  21.3      31  0.0022   27.5   3.4   33  147-185    32-64  (171)

No 1  
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=99.96  E-value=5.3e-30  Score=245.03  Aligned_cols=170  Identities=21%  Similarity=0.188  Sum_probs=128.1

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017459           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT  159 (371)
Q Consensus        80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT  159 (371)
                      .++++||+||+||++++.+.+..+.+.|..+ .+++..     +.|++.+|++++++++.     ..+.++||++|||||
T Consensus         2 ~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~-~~~~~~-----~~t~~~~~~~~~~~~~~-----~~~~d~ivv~GGDGT   70 (312)
T d2qv7a1           2 RKRARIIYNPTSGKEQFKRELPDALIKLEKA-GYETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT   70 (312)
T ss_dssp             CEEEEEEECTTSTTSCHHHHHHHHHHHHHHT-TEEEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred             CceEEEEECcCCCCCcHHHHHHHHHHHHHHC-CCeEEE-----EEcCCccHHHHHHHHHH-----HcCCCEEEEEcCCcH
Confidence            4789999999999999988888888888764 456654     55678899999987642     356789999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEEecCCCCc
Q 017459          160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV  239 (371)
Q Consensus       160 V~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v~~~~~~~  239 (371)
                      |++|+|+|.+.     ...+||||||+||||||||+||+    |.++.    ++++.+..|..+++|+|++.        
T Consensus        71 v~~v~~~l~~~-----~~~~~l~iiP~GTgN~~ar~l~~----~~~~~----~al~~~~~~~~~~id~~~v~--------  129 (312)
T d2qv7a1          71 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHI----PNDIM----GALDVIIEGHSTKVDIGKMN--------  129 (312)
T ss_dssp             HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHH----HHHHHHHHTCEEEEEEEEET--------
T ss_pred             HHHHHHHHHhh-----ccccceEEeecCCCCcchhhccc----cchHH----HHHHhhhcCCcEEecccccC--------
Confidence            99999999753     35689999999999999999999    44444    45566788999999998652        


Q ss_pred             cCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhhhccccccCccccccCCccchhhHHHHhhh
Q 017459          240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ  319 (371)
Q Consensus       240 ~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~F~Ny~siG~DA~Va~~f~~~R~~~P~~~~~rl~nkl~Y~~~~~~~  319 (371)
                                                      .++|+|++|+|+||.+++..++.+.        ++.+++.|...+++.
T Consensus       130 --------------------------------~~~f~~~~~~G~~a~~~~~~~~~~~--------~~~~~~~y~~~~~~~  169 (312)
T d2qv7a1         130 --------------------------------NRYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFEM  169 (312)
T ss_dssp             --------------------------------TEEESSEEEEECBCC---------------------CGGGSCCCTTTT
T ss_pred             --------------------------------ccceeeeeeeehhhHHHHHHHHhhh--------ccccchHHHHHHHHH
Confidence                                            3589999999999999998876542        334788898777766


Q ss_pred             cc
Q 017459          320 GW  321 (371)
Q Consensus       320 ~~  321 (371)
                      ..
T Consensus       170 l~  171 (312)
T d2qv7a1         170 LP  171 (312)
T ss_dssp             GG
T ss_pred             hh
Confidence            43


No 2  
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=99.96  E-value=1.7e-29  Score=239.82  Aligned_cols=172  Identities=20%  Similarity=0.250  Sum_probs=127.3

Q ss_pred             cEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHH
Q 017459           82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG  161 (371)
Q Consensus        82 ~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~  161 (371)
                      +.+||+||+||+++   .++++.+.|.++ .+++++     ..|++.+|++++++++.     ..++|.|+++|||||||
T Consensus         2 ~~l~i~N~~s~~~~---~~~~~~~~l~~~-g~~~~v-----~~T~~~g~a~~~~~~~~-----~~~~d~Ivv~GGDGTv~   67 (295)
T d2bona1           2 ASLLILNGKSTDNL---PLREAIMLLREE-GMTIHV-----RVTWEKGDAARYVEEAR-----KFGVATVIAGGGDGTIN   67 (295)
T ss_dssp             CEEEEECSSSTTCH---HHHHHHHHHHTT-TCCEEE-----EECCSTTHHHHHHHHHH-----HHTCSEEEEEESHHHHH
T ss_pred             cEEEEECCCCCCch---HHHHHHHHHHHC-CCEEEE-----EEcCCcchHHHHHHHHH-----hcCCCEEEEECCCcHHH
Confidence            57899999999763   345666777664 455554     55778899999998753     24689999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEEecCCCCccC
Q 017459          162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEVVD  241 (371)
Q Consensus       162 ~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v~~~~~~~~~  241 (371)
                      ||+|+|.+...   ...++|||||+||||||||+||+    +.++    +++++.+.+++.+++|++++.          
T Consensus        68 ev~~gl~~~~~---~~~p~lgilP~GTgN~~Ar~lg~----~~~~----~~a~~~i~~g~~~~id~~~v~----------  126 (295)
T d2bona1          68 EVSTALIQCEG---DDIPALGILPLGTANDFATSVGI----PEAL----DKALKLAIAGDAIAIDMAQVN----------  126 (295)
T ss_dssp             HHHHHHHHCCS---SCCCEEEEEECSSSCHHHHHTTC----CSSH----HHHHHHHHHSEEEEEEEEEET----------
T ss_pred             HHHHHHHhccC---CCCceEEEEECCcccchHHHcCC----Ccch----hhhhhhhcccceEEeeeeeee----------
Confidence            99999987532   34578999999999999999999    4444    445566778999999998651          


Q ss_pred             CCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhhhccccccCccccccCCccchhhHHHHhhhcc
Q 017459          242 PPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGW  321 (371)
Q Consensus       242 ~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~F~Ny~siG~DA~Va~~f~~~R~~~P~~~~~rl~nkl~Y~~~~~~~~~  321 (371)
                                                   .+++|.|++|+||||.+++.++..++        +..+++.|...+++..+
T Consensus       127 -----------------------------~~~~f~~~~~~G~~a~v~~~~~~~~~--------~~~G~~~y~~~~~~~l~  169 (295)
T d2bona1         127 -----------------------------KQTCFINMATGGFGTRITTETPEKLK--------AALGSVSYIIHGLMRMD  169 (295)
T ss_dssp             -----------------------------TSCEESSEEEEEEEEEC------------------CCHHHHHHHHHTSCEE
T ss_pred             -----------------------------cceeeeeeeeecccHHHHHHHHHHhh--------ccccchhhhhhhhhhhh
Confidence                                         13489999999999999988876542        23499999999988776


Q ss_pred             cccc
Q 017459          322 FLTP  325 (371)
Q Consensus       322 ~~~~  325 (371)
                      ...|
T Consensus       170 ~~~~  173 (295)
T d2bona1         170 TLQP  173 (295)
T ss_dssp             EEEC
T ss_pred             ccCc
Confidence            5443


No 3  
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.60  E-value=0.0049  Score=56.70  Aligned_cols=131  Identities=15%  Similarity=0.195  Sum_probs=68.0

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccce----eecchhHHHHHHhc---cchhhhccCCCcEEEE
Q 017459           81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEF----VQYGLACLEKLAEL---GDFCAKDTRQKMRIVV  153 (371)
Q Consensus        81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~----~t~~~~~a~~la~~---~~~~a~~~~~~~~Ivv  153 (371)
                      ++++++.|+..-  .+.+..+++.+.|..+++ ++........    ....+.+...+...   .+.......+.|.||+
T Consensus         1 r~v~lv~~~~k~--~a~~~a~~i~~~L~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlvi~   77 (302)
T d1u0ta_           1 RSVLLVVHTGRD--EATETARRVEKVLGDNKI-ALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLV   77 (302)
T ss_dssp             CEEEEEESSSGG--GGSHHHHHHHHHHHTTTC-EEEEEC-----------------------------------CCCEEE
T ss_pred             CEEEEEEeCCCH--HHHHHHHHHHHHHHHCCC-EEEEEecchhcccccccCchhhhhcCcccccccccccccccccEEEE
Confidence            578999998874  455778888888877653 2222110000    00000000100000   0000011234589999


Q ss_pred             EcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEE
Q 017459          154 AGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAV  231 (371)
Q Consensus       154 ~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~  231 (371)
                      .|||||+-.++..+..       ..+||==|.+|+       ||+=..+..   +.++.++..+..|....-.+-.+.
T Consensus        78 lGGDGT~L~a~~~~~~-------~~~PilGin~G~-------lGFL~~~~~---~~~~~~l~~~~~g~~~~~~r~~l~  138 (302)
T d1u0ta_          78 LGGDGTFLRAAELARN-------ASIPVLGVNLGR-------IGFLAEAEA---EAIDAVLEHVVAQDYRVEDRLTLD  138 (302)
T ss_dssp             EECHHHHHHHHHHHHH-------HTCCEEEEECSS-------CCSSCSEEG---GGHHHHHHHHHHTCCEEEEECCEE
T ss_pred             EcCChHHHHHHHHhhc-------cCCeEEEeCCCc-------cceecccch---hHHHHHHHHHHhcCcceeeeeeee
Confidence            9999999988887754       346665567774       455332221   245667777878876644444333


No 4  
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=93.41  E-value=0.067  Score=47.47  Aligned_cols=35  Identities=34%  Similarity=0.479  Sum_probs=24.5

Q ss_pred             CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 017459          146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGT  188 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGT  188 (371)
                      .+.|.|++.|||||+-.++..+        ...+||--|.+|+
T Consensus        38 ~~~D~vi~iGGDGT~L~a~~~~--------~~~~PilGIn~G~   72 (249)
T d1z0sa1          38 ENFDFIVSVGGDGTILRILQKL--------KRCPPIFGINTGR   72 (249)
T ss_dssp             GGSSEEEEEECHHHHHHHHTTC--------SSCCCEEEEECSS
T ss_pred             cCCCEEEEECCcHHHHHHHHHh--------cCCCcEEEECccc
Confidence            4568999999999997665422        1345766666775


No 5  
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=82.84  E-value=4.1  Score=36.81  Aligned_cols=102  Identities=22%  Similarity=0.262  Sum_probs=55.7

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017459           81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG  158 (371)
Q Consensus        81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG  158 (371)
                      ++.+|+.-..+-...  .+.+++...|.+..+ + .+....+.+    .....+++++.+.     ..+.|.||++|| |
T Consensus        29 ~k~liV~~~~~~~~~--g~~~~v~~~L~~~~i~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G   96 (359)
T d1o2da_          29 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G   96 (359)
T ss_dssp             SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred             CeEEEEEcCcHHHHh--hHHHHHHHHHHHcCCeEEEEcCccCCC----CHHHHHHhhhhcc-----ccCCceEEeccc-c
Confidence            466666654433222  256778888866543 2 122233322    1234444443321     245689999998 7


Q ss_pred             HHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccchhh
Q 017459          159 TVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSR  194 (371)
Q Consensus       159 TV~~Vln~L~~~~~------------~~~~~~~pigIIPl--GTGNDlAr  194 (371)
                      ++..+...+.-.-.            ....+.+|+..||.  |||-..+.
T Consensus        97 s~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse~t~  146 (359)
T d1o2da_          97 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVTP  146 (359)
T ss_dssp             HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGCC
T ss_pred             cchhHHHHHHHHHhCCCCchhhccCcccccCCCCeEEeccccccchhccc
Confidence            88888777653210            01135689999997  55444443


No 6  
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Probab=81.67  E-value=4  Score=32.91  Aligned_cols=68  Identities=18%  Similarity=0.210  Sum_probs=45.3

Q ss_pred             CCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017459           92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG  168 (371)
Q Consensus        92 G~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~GGDGTV~~Vln~L~  168 (371)
                      |+..-..+.+.....|...++ |+..+...+    ..+..+.++++++.     ..+ ...|.++|+.+-+.-|+.++.
T Consensus         9 GS~SD~~~~~~a~~~L~~~gi~~~~~v~SAH----rtp~rl~~~~~~~~-----~~~~~viIa~AG~aa~Lpgvva~~t   78 (155)
T d1xmpa_           9 GSTSDWETMKYACDILDELNIPYEKKVVSAH----RTPDYMFEYAETAR-----ERGLKVIIAGAGGAAHLPGMVAAKT   78 (155)
T ss_dssp             SSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTT-----TTTCCEEEEEEESSCCHHHHHHTTC
T ss_pred             CcHhhHHHHHHHHHHHHHcCCcEEEEEechh----cChHHHHHHHHHHH-----hhcceEEEeecccCCCchhHHHHhc
Confidence            443334567778888887776 777775543    25566777776542     122 356778899999999987764


No 7  
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=79.93  E-value=2.4  Score=38.93  Aligned_cols=103  Identities=17%  Similarity=0.212  Sum_probs=58.4

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe--eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017459           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD  157 (371)
Q Consensus        80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v--~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD  157 (371)
                      .++++||.-+.+-..  ..+.++++..|.+..+  +.+....+.+    ...+++++++.+.     ..+.|.||++|| 
T Consensus        34 ~~rvliVt~~~~~~~--~g~~~~l~~~L~~~gi~~~~f~~v~~~p----t~~~v~~~~~~~~-----~~~~D~IIavGG-  101 (398)
T d1vlja_          34 IRKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG-  101 (398)
T ss_dssp             CCEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-
T ss_pred             CCeEEEEECCcHHHH--hhHHHHHHHHHHhcCCeEEEEcCccCCC----CHHHHHHHhhhcc-----cccCceEEecCC-
Confidence            467888875544211  1256788888876543  2222222222    1244555554321     245689999998 


Q ss_pred             hHHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccchhh
Q 017459          158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLSR  194 (371)
Q Consensus       158 GTV~~Vln~L~~~~~------------~~~~~~~pigIIPl--GTGNDlAr  194 (371)
                      |++..+...+.-...            ......+|+..||.  |||-..+.
T Consensus       102 Gs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtgse~t~  152 (398)
T d1vlja_         102 GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMNG  152 (398)
T ss_dssp             HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGSS
T ss_pred             cchhhHHHHHHHHhhcccchHHhhcccccccCCCCeeeeecccccceeccc
Confidence            778888777753211            01135678999997  55554444


No 8  
>d1u11a_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Acetobacter aceti [TaxId: 435]}
Probab=75.45  E-value=9.6  Score=30.66  Aligned_cols=68  Identities=18%  Similarity=0.163  Sum_probs=46.1

Q ss_pred             CCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017459           92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG  168 (371)
Q Consensus        92 G~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~GGDGTV~~Vln~L~  168 (371)
                      |+..-..+.+.....|+..++ |+..+...+    ..+..+.++++++.     ... ...|.++|+.+.+.-|+.++.
T Consensus        10 GS~SD~~v~~~a~~~L~~~gI~~e~~v~SAH----R~p~~l~~~~~~~e-----~~~~~viIa~AG~aaaLpgvva~~t   79 (159)
T d1u11a_          10 GSQSDWETMRHADALLTELEIPHETLIVSAH----RTPDRLADYARTAA-----ERGLNVIIAGAGGAAHLPGMCAAWT   79 (159)
T ss_dssp             SSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTT-----TTTCCEEEEEEESSCCHHHHHHHHC
T ss_pred             CCHhhHHHHHHHHHHHHHhCCceEEEEehHh----hChHHHHHHHHHHH-----hcCCeEEEEEecCCCCCccceeeec
Confidence            443334566777778877776 888776543    24566777776542     122 356888999999999998885


No 9  
>d1o4va_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Thermotoga maritima [TaxId: 2336]}
Probab=71.60  E-value=21  Score=28.86  Aligned_cols=69  Identities=14%  Similarity=0.208  Sum_probs=44.5

Q ss_pred             CCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 017459           92 GGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG  168 (371)
Q Consensus        92 G~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~~Vln~L~  168 (371)
                      |+..-..+.+.....|...++ |++.+...+    ..+..+.++++++..    ..-.-.|.++||.+.+.-|+.++.
T Consensus         8 Gs~SD~~~~~~a~~~L~~~gi~~~~~v~saH----r~p~rl~~~~~~~~~----~~~~viIa~AG~aa~LpgvvA~~t   77 (169)
T d1o4va_           8 GSDSDLPVMKQAAEILEEFGIDYEITIVSAH----RTPDRMFEYAKNAEE----RGIEVIIAGAGGAAHLPGMVASIT   77 (169)
T ss_dssp             SCGGGHHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC
T ss_pred             CcHhhHHHHHHHHHHHHHcCCcEEEEEeeee----cCHHHHHHHHHHHHh----cCCeEEEEeecCCcCchHHHHHhc
Confidence            433334566777778877665 777665443    245566777665421    112356778899999999998885


No 10 
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=70.13  E-value=13  Score=30.03  Aligned_cols=73  Identities=16%  Similarity=0.193  Sum_probs=47.5

Q ss_pred             EEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHH
Q 017459           83 MVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTV  160 (371)
Q Consensus        83 llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~GGDGTV  160 (371)
                      +.||.    |+..-..+.+.....|...++ |+..+...+.    .+..+.++++++.     ..+ ...|.++||.+.+
T Consensus         4 V~IIm----GS~SD~~~~~~a~~~L~~~gI~~e~~v~SAHR----tp~~l~~~~~~~~-----~~~~~ViIa~AG~aa~L   70 (163)
T d1qcza_           4 VAIVM----GSKSDWATMQFAAEIFEILNVPHHVEVVSAHR----TPDKLFSFAESAE-----ENGYQVIIAGAGGAAHL   70 (163)
T ss_dssp             EEEEE----SSGGGHHHHHHHHHHHHHHTCCEEEEECCTTT----CHHHHHHHHHHTT-----TTTCSEEEEEECSSCCH
T ss_pred             EEEEE----CcHhhHHHHHHHHHHHHHcCCCeEEEEecccc----CHHHHHHHHHHHH-----HcCCeEEEEeccCCCcc
Confidence            44554    333334567777788877665 7777765432    4666777776542     122 3567788999999


Q ss_pred             HHHHHHHh
Q 017459          161 GWVLGSVG  168 (371)
Q Consensus       161 ~~Vln~L~  168 (371)
                      .-++.++.
T Consensus        71 pgvvA~~t   78 (163)
T d1qcza_          71 PGMIAAKT   78 (163)
T ss_dssp             HHHHHHSC
T ss_pred             cchhhHhc
Confidence            99998774


No 11 
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=65.88  E-value=6.3  Score=35.40  Aligned_cols=94  Identities=14%  Similarity=0.118  Sum_probs=51.5

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017459           81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT  159 (371)
Q Consensus        81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT  159 (371)
                      ++.+|+.-+.+.    ....+++...|....+ +......+.+    ....++++++.+.     ..+.|.||++|| |+
T Consensus        31 ~r~lvvtd~~~~----~~~~~~l~~~L~~~~i~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~D~IiavGG-Gs   96 (366)
T d1jq5a_          31 NKTVVIADEIVW----KIAGHTIVNELKKGNIAAEEVVFSGEA----SRNEVERIANIAR-----KAEAAIVIGVGG-GK   96 (366)
T ss_dssp             SEEEEEECHHHH----HHTHHHHHHHHHTTTCEEEEEECCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred             CeEEEEECCcHH----HHHHHHHHHHHHHCCCeEEEEEeCCCC----CHHHHHHHHHHhh-----ccCCcEEEEecC-Cc
Confidence            566776533322    2223566667765443 3332222222    1234444443321     235678888776 88


Q ss_pred             HHHHHHHHhhcccCCCCCCCcEEEeeC--CCccchhh
Q 017459          160 VGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR  194 (371)
Q Consensus       160 V~~Vln~L~~~~~~~~~~~~pigIIPl--GTGNDlAr  194 (371)
                      +..+...+...      ..+|+..||.  |||-....
T Consensus        97 ~iD~aK~iA~~------~~~p~i~IPTT~gtgse~t~  127 (366)
T d1jq5a_          97 TLDTAKAVADE------LDAYIVIVPTAASTDAPTSA  127 (366)
T ss_dssp             HHHHHHHHHHH------HTCEEEEEESSCCSSCTTCS
T ss_pred             cccchheeeec------ccceeeehhhhhhhhhcccc
Confidence            88888887653      4588889987  55544443


No 12 
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=64.63  E-value=12  Score=33.40  Aligned_cols=90  Identities=17%  Similarity=0.222  Sum_probs=49.5

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017459           81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV  160 (371)
Q Consensus        81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV  160 (371)
                      ++++++.+++=     .++.+.+.+.+....++.+.....    ......++++.+.+.+  ....+.+.||++|| |++
T Consensus        29 ~k~~iV~D~~V-----~~~~~~~~~~l~~~~i~~i~~gE~----~Ksl~~~~~i~~~l~~--~~~~r~~~iiaiGG-G~v   96 (347)
T d1ujna_          29 GPAALLFDRRV-----EGFAQEVAKALGVRHLLGLPGGEA----AKSLEVYGKVLSWLAE--KGLPRNATLLVVGG-GTL   96 (347)
T ss_dssp             SCEEEEEEGGG-----HHHHHHHHHHHTCCCEEEECCSGG----GSSHHHHHHHHHHHHH--HTCCTTCEEEEEES-HHH
T ss_pred             CCEEEEECccH-----HHHHHHHHHhcCCceEEEECCCcc----cCCHHHHHHHHHHHHH--hhcccccceeEeec-hhh
Confidence            56777776542     346666666665544443322111    1123445555543321  12345567766655 999


Q ss_pred             HHHHHHHhhcccCCCCCCCcEEEeeC
Q 017459          161 GWVLGSVGELNKQGREPVPPVAIIPL  186 (371)
Q Consensus       161 ~~Vln~L~~~~~~~~~~~~pigIIPl  186 (371)
                      ..++.-+....    ....|+-.+|.
T Consensus        97 ~D~agf~A~~y----~rgi~~i~vPT  118 (347)
T d1ujna_          97 TDLGGFVAATY----LRGVAYLAFPT  118 (347)
T ss_dssp             HHHHHHHHHHB----TTCCEEEEEEC
T ss_pred             hhHHHHHhhhh----cCCcceeeccc
Confidence            99986665432    25577888885


No 13 
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=58.28  E-value=16  Score=33.00  Aligned_cols=105  Identities=12%  Similarity=0.196  Sum_probs=57.0

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017459           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT  159 (371)
Q Consensus        80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT  159 (371)
                      .++++|++-+.+-.  ...+.+++...|....+..+..+.+.+    ...++++.++.+.     ..+.|.||++|| |+
T Consensus        32 ~~~vliV~~~~~~~--~~g~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs   99 (390)
T d1oj7a_          32 DARVLITYGGGSVK--KTGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GS   99 (390)
T ss_dssp             TCEEEEEECSSHHH--HHSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HH
T ss_pred             CCCEEEEECCchHH--HccHHHHHHHHcCCCcEEEEeCccCCC----CHHHHHHHHHHHh-----hcCCCEEEecCC-Cc
Confidence            45777776443321  123567777777644333333333332    1234555554332     235688999988 77


Q ss_pred             HHHHHHHHhhccc---------------CCCCCCCcEEEeeC--CCccchhhhh
Q 017459          160 VGWVLGSVGELNK---------------QGREPVPPVAIIPL--GTGNDLSRSF  196 (371)
Q Consensus       160 V~~Vln~L~~~~~---------------~~~~~~~pigIIPl--GTGNDlArsL  196 (371)
                      +..+...+.-...               ....+.+|+..||.  |||.......
T Consensus       100 ~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTtagtgse~t~~a  153 (390)
T d1oj7a_         100 VLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGA  153 (390)
T ss_dssp             HHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSSEE
T ss_pred             cccHHHHHHHHhcCCcccchhhhhcccccccccCCCcccccccccccccccccc
Confidence            7777765532211               01134568888886  6666555543


No 14 
>d1v0ea2 b.108.1.3 (A:761-910) Endo-alpha-sialidase {Bacteriophage K1F [TaxId: 344021]}
Probab=49.17  E-value=2.6  Score=33.06  Aligned_cols=12  Identities=50%  Similarity=0.980  Sum_probs=10.8

Q ss_pred             CcEEEEEcCchH
Q 017459          148 KMRIVVAGGDGT  159 (371)
Q Consensus       148 ~~~Ivv~GGDGT  159 (371)
                      ..|+|+||||||
T Consensus        75 ~QRlIv~GG~gT   86 (150)
T d1v0ea2          75 GQRIIFCGGEGT   86 (150)
T ss_dssp             GCEEEEESSSSS
T ss_pred             ccEEEEeCCCCc
Confidence            369999999999


No 15 
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}
Probab=47.83  E-value=39  Score=26.68  Aligned_cols=32  Identities=28%  Similarity=0.307  Sum_probs=22.5

Q ss_pred             cEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017459          149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL  186 (371)
Q Consensus       149 ~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl  186 (371)
                      ..|+..|+-|....+..+..+.      ....+||+|.
T Consensus        37 ~~V~~GG~~GlM~ava~ga~~~------gg~viGilP~   68 (170)
T d1rcua_          37 YLVFNGGRDGVMELVSQGVREA------GGTVVGILPD   68 (170)
T ss_dssp             CEEEECCSSHHHHHHHHHHHHT------TCCEEEEEST
T ss_pred             CEEECCCccCHHHHHHHHHHhc------CCccccccch
Confidence            4666666667777777777652      4568999994


No 16 
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]}
Probab=47.82  E-value=4.4  Score=31.48  Aligned_cols=35  Identities=17%  Similarity=0.117  Sum_probs=30.2

Q ss_pred             hhhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017459           14 SSMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA   48 (371)
Q Consensus        14 ~~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~   48 (371)
                      ...|+..+..|..+ |||.-|..|+..++.+||...
T Consensus        71 ~~~i~~~~~~~~~VlVHC~~G~sRS~~v~~aYLm~~  106 (145)
T d1m3ga_          71 IGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQS  106 (145)
T ss_dssp             HHHHHHHHHTTCCEEECCSSSSSHHHHHHHHHHHHT
T ss_pred             HHHHHHhhccCceEEEEcccccccHHHHHHHHHHHH
Confidence            45667788888888 999999999999999999864


No 17 
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]}
Probab=42.74  E-value=4.2  Score=31.38  Aligned_cols=34  Identities=24%  Similarity=0.120  Sum_probs=29.6

Q ss_pred             hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017459           15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA   48 (371)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~   48 (371)
                      ..|+..+..|-.+ |||.-|..|+..++-+||...
T Consensus        74 ~~i~~~~~~~~~VlVHC~~G~~RS~~vv~aYLm~~  108 (144)
T d1mkpa_          74 SFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQK  108 (144)
T ss_dssp             HHHHHHHHTTCEEEEECSSCSHHHHHHHHHHHHHH
T ss_pred             HHHHHhhhccceEEEEecccccchHHHHHHHHHHH
Confidence            4567788888888 999999999999999999875


No 18 
>d3eeqa2 c.152.1.1 (A:8-214) Cobalamin biosynthesis protein G, CbiG {Sulfolobus solfataricus [TaxId: 2287]}
Probab=39.91  E-value=53  Score=27.11  Aligned_cols=92  Identities=16%  Similarity=0.159  Sum_probs=51.6

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017459           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT  159 (371)
Q Consensus        80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT  159 (371)
                      ++++.+|.-...|    .++.+++++.|..........       .....+++++          ..+++.+|.+|-=|.
T Consensus         7 ~r~IAIi~~t~~g----~~~a~~l~~~L~~~~~~~~~~-------~~~~~~l~~~----------~~~~d~~i~i~A~Gi   65 (207)
T d3eeqa2           7 WRGICIISASEDA----FSAGETIKEKLKSFEIPVVHY-------RYKDAEIETI----------WKCYDAIVFVMALEG   65 (207)
T ss_dssp             TTCEEEEECSHHH----HHHHHHHHHHHHHTTCCEEEE-------EGGGCCHHHH----------TTTCSEEEEESCHHH
T ss_pred             cCCeEEEEEChhh----HHHHHHHHHHccccccccccc-------ccchHHHHHH----------HhcCCeEEEEeChHH
Confidence            6788888876655    456667777776543321111       1111222222          456778888888887


Q ss_pred             HHHHHHHHhhcccCCCCCCCcEE--------EeeC----CCccchhhhh
Q 017459          160 VGWVLGSVGELNKQGREPVPPVA--------IIPL----GTGNDLSRSF  196 (371)
Q Consensus       160 V~~Vln~L~~~~~~~~~~~~pig--------IIPl----GTGNDlArsL  196 (371)
                      +--.+..+...+    ..+|++-        +||+    |-+|+||+.+
T Consensus        66 ~VR~iap~l~~K----~~DPaVvvvde~G~~vIpLL~GH~GaN~La~~i  110 (207)
T d3eeqa2          66 ATRIVCKYAKSK----TEDPAIVCIDDKINYVIPLLGGHWGANDIAREL  110 (207)
T ss_dssp             HHHHHHHHCCCT----TTCCEEEEECTTCCEEEEEECTTTTHHHHHHHH
T ss_pred             HHHHhhhhhccc----ccCCCEEEEeCCCCEEEEeecCcccHHHHHHHH
Confidence            777776665432    3556553        3344    2367776654


No 19 
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]}
Probab=38.38  E-value=25  Score=31.82  Aligned_cols=36  Identities=19%  Similarity=0.290  Sum_probs=26.0

Q ss_pred             CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017459          146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL  186 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl  186 (371)
                      .+.+.||++|| |+++.++.-+....    ....|+..+|.
T Consensus       101 ~r~d~IiaiGG-G~v~D~ak~~A~~y----~rgi~~i~vPT  136 (389)
T d1sg6a_         101 GRDTVVIALGG-GVIGDLTGFVASTY----MRGVRYVQVPT  136 (389)
T ss_dssp             CTTCEEEEEES-HHHHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred             CCCceEEEecc-chHHHHHHHHHHHH----hcCCceeEecc
Confidence            45678888888 89999998766432    14577888885


No 20 
>d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=37.46  E-value=16  Score=29.48  Aligned_cols=35  Identities=31%  Similarity=0.487  Sum_probs=25.5

Q ss_pred             CCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017459          147 QKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG  187 (371)
Q Consensus       147 ~~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG  187 (371)
                      ....+|..||. |....+..+..+.      ....+||+|-.
T Consensus        33 ~g~~lv~GGG~~GlMga~a~ga~~~------gg~viGv~~~~   68 (181)
T d1ydhb_          33 RKIDLVYGGGSVGLMGLISRRVYEG------GLHVLGIIPKA   68 (181)
T ss_dssp             TTCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEEGG
T ss_pred             CCCeEEECCCchHHHHHHHHhHhhc------CCcccccchhh
Confidence            45677888888 7777787887663      45679999853


No 21 
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=36.26  E-value=25  Score=31.01  Aligned_cols=40  Identities=30%  Similarity=0.281  Sum_probs=31.9

Q ss_pred             CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017459          146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS  193 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA  193 (371)
                      .+-+.+++.|||||+.-+ +.|.+       ...++--||-===||+.
T Consensus        93 ~~I~~li~iGG~~s~~~a-~~l~~-------~~~~vigiPkTIDNDl~  132 (320)
T d1pfka_          93 RGIDALVVIGGDGSYMGA-MRLTE-------MGFPCIGLPGTIDNDIK  132 (320)
T ss_dssp             TTCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEBCTTCCCT
T ss_pred             cCCCEEEEeCCchHHHHH-HHHHh-------cccceeeeeeeecCCCC
Confidence            355799999999999866 45554       45788999999999997


No 22 
>d1t35a_ c.129.1.1 (A:) Hypothetical protein YvdD {Bacillus subtilis [TaxId: 1423]}
Probab=33.36  E-value=21  Score=28.66  Aligned_cols=36  Identities=22%  Similarity=0.446  Sum_probs=24.2

Q ss_pred             CCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCCC
Q 017459          147 QKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLGT  188 (371)
Q Consensus       147 ~~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlGT  188 (371)
                      ....+|..||+ |....+.++..+      .....+|++|-.-
T Consensus        32 ~g~~lv~GGG~~GlMga~a~ga~~------~gg~v~gv~~~~l   68 (179)
T d1t35a_          32 QGIGLVYGGSRVGLMGTIADAIME------NGGTAIGVMPSGL   68 (179)
T ss_dssp             TTCEEEECCCCSHHHHHHHHHHHT------TTCCEEEEEETTC
T ss_pred             CCCeEEECCCchHHHHHHhcchhh------cCCceeccccchh
Confidence            45677777778 666666677654      2446799998653


No 23 
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.19  E-value=7.5  Score=31.60  Aligned_cols=34  Identities=12%  Similarity=-0.016  Sum_probs=28.6

Q ss_pred             hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017459           15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA   48 (371)
Q Consensus        15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~   48 (371)
                      .+++.....|..+ |||.-|.+|+-.++.+||...
T Consensus       100 ~~i~~~~~~~~~V~VHC~~G~gRsgt~~a~yL~~~  134 (182)
T d1ohea2         100 EFLDICENAEGAIAVHSKAGLGRTGTLIACYIMKH  134 (182)
T ss_dssp             HHHHHHHSCSSEEEEECSSSSHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcEEEEeCCCCcchHHHHHHHHHHH
Confidence            4556677778878 999999999999999998864


No 24 
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=31.24  E-value=62  Score=28.50  Aligned_cols=101  Identities=13%  Similarity=0.252  Sum_probs=52.7

Q ss_pred             CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eE-EEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017459           80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FD-LSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD  157 (371)
Q Consensus        80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~d-l~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD  157 (371)
                      .++++|+.-+..   ....+++++...|.+..+ +. +....|.+    ...+.+++++.+.     ..+.|.||++|| 
T Consensus        30 ~k~~Livt~~~~---~~~g~~~~v~~~L~~~gi~~~vf~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IiaiGG-   96 (385)
T d1rrma_          30 YQKALIVTDKTL---VQCGVVAKVTDKMDAAGLAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG-   96 (385)
T ss_dssp             CCEEEEECBHHH---HHTTHHHHHHHHHHHTTCEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred             CCEEEEEECcch---hhCcHHHHHHHHHHHcCCeEEEEcCccCCC----CHHHHHHHhhhhh-----ccCCCEEEecCC-
Confidence            356766643221   112367788888876543 22 12222322    1234455444321     245689999998 


Q ss_pred             hHHHHHHHHHhhccc--------------CCCCCCCcEEEeeC--CCccchh
Q 017459          158 GTVGWVLGSVGELNK--------------QGREPVPPVAIIPL--GTGNDLS  193 (371)
Q Consensus       158 GTV~~Vln~L~~~~~--------------~~~~~~~pigIIPl--GTGNDlA  193 (371)
                      |++-.+..++.-+..              ....+.+|+..||.  |||--..
T Consensus        97 GS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse~t  148 (385)
T d1rrma_          97 GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEVT  148 (385)
T ss_dssp             HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTTC
T ss_pred             CchhhHHHHHHHHhcCCccchhhhhhccccccCCCCceEecccccccccccc
Confidence            666666665542110              01134578999996  5554333


No 25 
>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=29.68  E-value=26  Score=28.21  Aligned_cols=35  Identities=29%  Similarity=0.490  Sum_probs=23.5

Q ss_pred             CCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017459          147 QKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG  187 (371)
Q Consensus       147 ~~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG  187 (371)
                      ....||..||. |-...+.++..+      ...-.+|++|-.
T Consensus        37 ~g~~lV~GGG~~GlMga~a~ga~~------~gg~v~Gi~~~~   72 (183)
T d2q4oa1          37 RNIDLVYGGGSIGLMGLVSQAVHD------GGRHVIGIIPKT   72 (183)
T ss_dssp             TTCEEEECCCSSHHHHHHHHHHHH------TTCCEEEEEETT
T ss_pred             cCCeEEECCCCcchHHHHHHHHHh------cCCccccccccc
Confidence            45677777888 555666666654      245679999864


No 26 
>d1oboa_ c.23.5.1 (A:) Flavodoxin {Anabaena, pcc 7119 and 7120 [TaxId: 1163]}
Probab=29.32  E-value=95  Score=23.85  Aligned_cols=115  Identities=16%  Similarity=0.204  Sum_probs=59.1

Q ss_pred             CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEE---cCc
Q 017459           81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVA---GGD  157 (371)
Q Consensus        81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~---GGD  157 (371)
                      |++.||+=..+|  +.+.+.+.|++.|.... +++......+        ..           ...+++.|+++   =|+
T Consensus         2 KKI~I~YgS~tG--nTe~vA~~I~~~l~~~~-~~v~~i~~~~--------~~-----------~l~~~d~~i~g~sT~g~   59 (169)
T d1oboa_           2 KKIGLFYGTQTG--KTESVAEIIRDEFGNDV-VTLHDVSQAE--------VT-----------DLNDYQYLIIGCPTLNI   59 (169)
T ss_dssp             CSEEEEECCSSS--HHHHHHHHHHHHHCTTT-EEEEETTTCC--------GG-----------GGGGCSEEEEEEEEETT
T ss_pred             CEEEEEEECCCc--hHHHHHHHHHHHhccCC-ceEEEcccCC--------hh-----------hhccCCEEEEEEecCCC
Confidence            678899976665  56789999999886543 4543321100        11           12344544444   266


Q ss_pred             hHHHHHHHHH-hhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeee
Q 017459          158 GTVGWVLGSV-GELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW  228 (371)
Q Consensus       158 GTV~~Vln~L-~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w  228 (371)
                      |-+-.-...+ ..+.. .......++++-+|-+......+.          .++..+.+.+.......+-.|
T Consensus        60 G~~p~~~~~~~~~l~~-~~l~~k~~a~fg~Gd~~~~~e~f~----------~a~~~l~~~l~~~g~~~ig~~  120 (169)
T d1oboa_          60 GELQSDWEGLYSELDD-VDFNGKLVAYFGTGDQIGYADNFQ----------DAIGILEEKISQRGGKTVGYW  120 (169)
T ss_dssp             TEECHHHHHHHTTGGG-CCCTTCEEEEEEECCTTTTTTSTT----------HHHHHHHHHHHHTTCEECCCE
T ss_pred             CCCChhHHHhhhhhcc-cCCCCCceeEEeccCCcchhhhHh----------hhHHHHHHHHHhcCCcccccc
Confidence            6432222222 22211 123566777777665544333332          255555555555555555544


No 27 
>d1vhqa_ c.23.16.2 (A:) Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) {Escherichia coli [TaxId: 562]}
Probab=24.95  E-value=76  Score=25.92  Aligned_cols=48  Identities=15%  Similarity=0.248  Sum_probs=34.4

Q ss_pred             CCCcEEEEEcCchHH-------------------HHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCC
Q 017459          146 RQKMRIVVAGGDGTV-------------------GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGS  201 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV-------------------~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~  201 (371)
                      .++|.|++.||=|..                   ..++....+       ..-|+|-|=.|. .-|++.++..++
T Consensus        84 ~~yDaliiPGG~g~~~~l~~~~~~~~~~~~~~~v~~li~~~~~-------~gk~iaaIC~gp-~~l~~~~~~~~~  150 (217)
T d1vhqa_          84 AELDALIVPGGFGAAKNLSNFASLGSECTVDRELKALAQAMHQ-------AGKPLGFMCIAP-AMLPKIFDFPLR  150 (217)
T ss_dssp             GGCSEEEECCSTHHHHTSBCHHHHGGGCCBCHHHHHHHHHHHH-------TTCCEEEETTGG-GGHHHHCSSCCE
T ss_pred             hHCCEEEecCCcccHHHHhhhhccccccccCHHHHHHHHHHHH-------cCCCEEEEChhH-HHHHHHhccCCC
Confidence            467999999998763                   344444443       566899999888 578888776554


No 28 
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.25  E-value=13  Score=29.63  Aligned_cols=31  Identities=10%  Similarity=-0.201  Sum_probs=26.2

Q ss_pred             hhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017459           17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV   47 (371)
Q Consensus        17 ~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~   47 (371)
                      |+.....|..+ |||.-|.+|+-.++..||..
T Consensus       102 i~~~l~~~~~V~VHC~~G~gRtg~v~~~~Li~  133 (176)
T d1fpza_         102 LTTCLKNYRKTLIHSYGGLGRSCLVAACLLLY  133 (176)
T ss_dssp             HHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred             HHHHHHcCCeEEEEecCCCCchHHHHHHHHHH
Confidence            34666678777 99999999999999999875


No 29 
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=23.82  E-value=39  Score=27.96  Aligned_cols=23  Identities=17%  Similarity=0.123  Sum_probs=16.5

Q ss_pred             CCCcEEEEEcCchHHHHHHHHHh
Q 017459          146 RQKMRIVVAGGDGTVGWVLGSVG  168 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV~~Vln~L~  168 (371)
                      .+...|++.-|||++..-++.|.
T Consensus        68 ~p~~~vv~i~GDGsf~m~~~eL~   90 (229)
T d2djia3          68 YPDRQVWNIIGDGAFSMTYPDVV   90 (229)
T ss_dssp             CTTSCEEEEEEHHHHHHHGGGHH
T ss_pred             cccccccccccccccccccchhh
Confidence            34456888888988877766664


No 30 
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae [TaxId: 666]}
Probab=23.63  E-value=64  Score=27.92  Aligned_cols=47  Identities=21%  Similarity=0.366  Sum_probs=28.9

Q ss_pred             CCcEEEEEcCchHHHHHH-HHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017459          147 QKMRIVVAGGDGTVGWVL-GSVGELNKQGREPVPPVAIIPLGTGNDLS  193 (371)
Q Consensus       147 ~~~~Ivv~GGDGTV~~Vl-n~L~~~~~~~~~~~~pigIIPlGTGNDlA  193 (371)
                      +..+.|+.|||-++..-+ .++.+........+.++|+|=+-.--||-
T Consensus       107 ~~~~pivlGGdHsi~~~~~~a~~~~~~~~~~~~~~lgvI~fDAH~Dlr  154 (324)
T d1xfka_         107 PHARAIVLGGGHEIAWATFQGLAQHFLATGVKQPRIGIINFDAHFDLR  154 (324)
T ss_dssp             TTCCEEEECSSTTHHHHHHHHHHHHHHHTTCCSCCEEEEEECSSCCCC
T ss_pred             cCCceEEECCCCccchhHHHHHHHhhhhhcccCCceEEEEEecccccC
Confidence            344688999998887643 44433211011245789999887766663


No 31 
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=22.63  E-value=47  Score=28.95  Aligned_cols=42  Identities=26%  Similarity=0.238  Sum_probs=30.1

Q ss_pred             CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC--CCccchhh
Q 017459          146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLSR  194 (371)
Q Consensus       146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl--GTGNDlAr  194 (371)
                      .+.|.||++|| |++..+...+.-.      ...|+..||.  |||-....
T Consensus        82 ~~~D~IIavGG-Gs~~D~aK~ia~~------~~~P~I~IPTTa~tgse~t~  125 (364)
T d1kq3a_          82 EETDVVVGIGG-GKTLDTAKAVAYK------LKKPVVIVPTIASTDAPCSA  125 (364)
T ss_dssp             TTCCEEEEEES-HHHHHHHHHHHHH------TTCCEEEEESSCCCSCTTSS
T ss_pred             ccCcEEEEecc-Cccceeecccccc------ccccceeecccccccccccc
Confidence            35688888887 9999999888653      5678888996  44444433


No 32 
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=22.05  E-value=38  Score=26.91  Aligned_cols=56  Identities=16%  Similarity=0.161  Sum_probs=32.2

Q ss_pred             EEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHH
Q 017459          153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRAS  218 (371)
Q Consensus       153 v~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~  218 (371)
                      ..||+.| .++++.+..   ......|-+-+|=+|| ||+.+...     +....+.++.+++.+.
T Consensus        61 Gi~G~tt-~~~~~rl~~---~~~~~~pd~vii~~G~-ND~~~~~~-----~~~~~~~~~~li~~i~  116 (211)
T d2hsja1          61 GIRGYQT-GLLLENLDA---HLYGGAVDKIFLLIGT-NDIGKDVP-----VNEALNNLEAIIQSVA  116 (211)
T ss_dssp             ECTTCCH-HHHHHTGGG---GCCCSCCCEEEEECCH-HHHHTTCC-----HHHHHHHHHHHHHHHH
T ss_pred             ccccccH-HHHHHHHHH---hhccCCCCEEEEEeCc-chhccCcc-----hHHHHHhhhhhhhhhc
Confidence            5688876 455555432   1224567788888887 99865221     2223345556665543


No 33 
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=21.74  E-value=1e+02  Score=26.60  Aligned_cols=40  Identities=28%  Similarity=0.313  Sum_probs=31.4

Q ss_pred             CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhh
Q 017459          147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSR  194 (371)
Q Consensus       147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlAr  194 (371)
                      +-+.++++|||||..-+ +.|.+       ...++--||-===||+.-
T Consensus        93 ~I~~li~iGG~~s~~~a-~~L~~-------~~~~vvgIPkTIDNDl~~  132 (319)
T d4pfka_          93 GIQGLVVIGGDGSYQGA-KKLTE-------HGFPCVGVPGTIDNDIPG  132 (319)
T ss_dssp             TCCEEEEEECHHHHHHH-HHHHH-------TTCCEEEEEBCSSCCCTT
T ss_pred             ccceEEEecCchHHHHH-HHHHh-------ccCceeeeeeeccCCcCC
Confidence            45799999999998765 45554       457788899999999964


No 34 
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}
Probab=21.71  E-value=34  Score=28.12  Aligned_cols=34  Identities=21%  Similarity=0.131  Sum_probs=25.6

Q ss_pred             CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017459          147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL  186 (371)
Q Consensus       147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl  186 (371)
                      ....||-.||.|....+..+..+.      ....+||+|-
T Consensus        64 ~g~~lv~GGg~GlMgava~ga~~~------gG~viGi~~~   97 (208)
T d1weka_          64 AGFGVVTGGGPGVMEAVNRGAYEA------GGVSVGLNIE   97 (208)
T ss_dssp             HTCEEEECSCSHHHHHHHHHHHHT------TCCEEEEEEC
T ss_pred             CcceEEeCCCchHHHHHHhhhhhc------CCceeccccc
Confidence            456788889999888888887663      4457898763


No 35 
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}
Probab=21.33  E-value=31  Score=27.51  Aligned_cols=33  Identities=12%  Similarity=0.090  Sum_probs=25.0

Q ss_pred             CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEee
Q 017459          147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIP  185 (371)
Q Consensus       147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIP  185 (371)
                      +...+|..||.|....+..+..+.      ..-.+||+|
T Consensus        32 ~g~~lv~GGg~G~M~a~a~ga~~~------gG~~iGv~~   64 (171)
T d1weha_          32 EGFGLACGGYQGGMEALARGVKAK------GGLVVGVTA   64 (171)
T ss_dssp             TTEEEEECCSSTHHHHHHHHHHHT------TCCEEECCC
T ss_pred             CCCceeeCcchHHHHHHHHHHHhc------cCceeeeee
Confidence            456788888999988888888763      345799975


Done!