Query 017460
Match_columns 371
No_of_seqs 135 out of 1645
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:46:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017460.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017460hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 3.1E-62 6.8E-67 427.6 32.4 355 11-369 1-366 (366)
2 COG1064 AdhP Zn-dependent alco 100.0 8.3E-62 1.8E-66 434.7 31.6 326 10-371 1-339 (339)
3 KOG0022 Alcohol dehydrogenase, 100.0 1.1E-60 2.5E-65 410.9 32.8 362 7-369 2-375 (375)
4 KOG0024 Sorbitol dehydrogenase 100.0 6.9E-57 1.5E-61 390.6 30.1 333 11-371 3-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 7.6E-54 1.6E-58 370.6 30.4 336 7-370 4-355 (360)
6 PLN02827 Alcohol dehydrogenase 100.0 7.5E-53 1.6E-57 397.3 38.7 370 2-371 2-378 (378)
7 PLN02740 Alcohol dehydrogenase 100.0 2.4E-52 5.2E-57 394.9 36.2 364 6-369 4-381 (381)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 2.1E-51 4.5E-56 386.7 37.6 356 13-369 2-368 (368)
9 cd08281 liver_ADH_like1 Zinc-d 100.0 1.4E-51 3.1E-56 388.5 36.5 351 13-367 1-370 (371)
10 cd08300 alcohol_DH_class_III c 100.0 6.6E-51 1.4E-55 383.6 36.7 357 11-368 1-368 (368)
11 cd08301 alcohol_DH_plants Plan 100.0 1.1E-50 2.4E-55 382.4 36.9 358 11-368 1-369 (369)
12 TIGR03451 mycoS_dep_FDH mycoth 100.0 1E-50 2.2E-55 381.0 36.1 347 12-369 1-358 (358)
13 cd08277 liver_alcohol_DH_like 100.0 2.3E-50 5.1E-55 379.5 36.9 356 11-368 1-365 (365)
14 cd08239 THR_DH_like L-threonin 100.0 1.3E-49 2.9E-54 371.1 34.7 327 13-369 1-339 (339)
15 PRK09880 L-idonate 5-dehydroge 100.0 5.5E-48 1.2E-52 360.4 34.2 328 10-369 2-343 (343)
16 TIGR02819 fdhA_non_GSH formald 100.0 2.8E-47 6E-52 360.1 33.7 336 12-370 2-391 (393)
17 COG1063 Tdh Threonine dehydrog 100.0 3.6E-47 7.8E-52 353.4 33.7 333 13-369 1-350 (350)
18 PLN02586 probable cinnamyl alc 100.0 5.9E-47 1.3E-51 355.1 33.9 340 1-369 1-353 (360)
19 PRK10309 galactitol-1-phosphat 100.0 2.5E-46 5.5E-51 350.0 35.0 330 13-370 1-347 (347)
20 COG0604 Qor NADPH:quinone redu 100.0 1.9E-46 4E-51 344.1 30.8 305 13-369 1-326 (326)
21 cd08299 alcohol_DH_class_I_II_ 100.0 5.8E-45 1.3E-49 343.4 38.0 360 8-369 3-373 (373)
22 cd08230 glucose_DH Glucose deh 100.0 1.5E-45 3.2E-50 345.8 32.6 324 13-369 1-355 (355)
23 TIGR03201 dearomat_had 6-hydro 100.0 3.4E-45 7.4E-50 342.4 33.3 324 16-369 2-349 (349)
24 PLN02178 cinnamyl-alcohol dehy 100.0 1.8E-44 3.8E-49 339.4 34.0 326 15-369 9-348 (375)
25 cd05279 Zn_ADH1 Liver alcohol 100.0 5.4E-44 1.2E-48 336.2 36.5 353 13-367 1-364 (365)
26 TIGR02822 adh_fam_2 zinc-bindi 100.0 3.6E-44 7.9E-49 332.3 31.7 311 15-367 1-328 (329)
27 cd08231 MDR_TM0436_like Hypoth 100.0 1.3E-43 2.8E-48 333.6 35.9 337 14-369 2-361 (361)
28 cd08233 butanediol_DH_like (2R 100.0 1.1E-43 2.4E-48 332.8 35.0 324 13-367 1-350 (351)
29 PLN02514 cinnamyl-alcohol dehy 100.0 2.1E-43 4.6E-48 331.0 34.8 332 10-370 7-351 (357)
30 cd08278 benzyl_alcohol_DH Benz 100.0 1.1E-42 2.4E-47 327.3 34.9 352 11-368 1-365 (365)
31 KOG1197 Predicted quinone oxid 100.0 7.8E-43 1.7E-47 291.9 25.9 305 10-370 6-331 (336)
32 cd08279 Zn_ADH_class_III Class 100.0 9.9E-42 2.1E-46 320.8 36.6 351 13-367 1-362 (363)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 2.4E-41 5.2E-46 316.9 35.9 332 13-369 1-351 (351)
34 cd08256 Zn_ADH2 Alcohol dehydr 100.0 5.1E-41 1.1E-45 314.6 35.3 326 13-367 1-350 (350)
35 PRK10083 putative oxidoreducta 100.0 6.1E-41 1.3E-45 312.8 34.7 325 13-371 1-339 (339)
36 cd08238 sorbose_phosphate_red 100.0 6.1E-41 1.3E-45 319.8 34.4 320 11-370 1-369 (410)
37 cd08296 CAD_like Cinnamyl alco 100.0 1.1E-40 2.4E-45 310.2 33.8 320 13-368 1-333 (333)
38 cd05278 FDH_like Formaldehyde 100.0 2E-40 4.4E-45 310.2 34.8 331 13-369 1-347 (347)
39 cd08237 ribitol-5-phosphate_DH 100.0 2.8E-41 6E-46 314.7 28.1 310 14-370 4-340 (341)
40 cd08283 FDH_like_1 Glutathione 100.0 3.9E-40 8.5E-45 312.1 35.3 337 13-369 1-386 (386)
41 cd05284 arabinose_DH_like D-ar 100.0 2.6E-40 5.7E-45 308.6 33.7 323 13-369 1-340 (340)
42 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.5E-40 9.8E-45 308.2 33.6 326 13-368 1-349 (350)
43 cd08286 FDH_like_ADH2 formalde 100.0 9.3E-40 2E-44 305.5 34.9 327 13-369 1-345 (345)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 1.1E-39 2.4E-44 305.0 35.3 328 13-368 1-344 (345)
45 cd08263 Zn_ADH10 Alcohol dehyd 100.0 1.3E-39 2.7E-44 307.0 34.4 349 13-368 1-367 (367)
46 cd08246 crotonyl_coA_red croto 100.0 1.5E-39 3.2E-44 309.3 33.9 332 8-368 8-392 (393)
47 TIGR01202 bchC 2-desacetyl-2-h 100.0 5.5E-40 1.2E-44 301.7 29.5 293 12-368 1-308 (308)
48 cd08284 FDH_like_2 Glutathione 100.0 4.8E-39 1.1E-43 300.6 34.6 330 13-368 1-343 (344)
49 PLN02702 L-idonate 5-dehydroge 100.0 8.6E-39 1.9E-43 301.0 35.7 330 10-368 15-363 (364)
50 cd08261 Zn_ADH7 Alcohol dehydr 100.0 1.3E-38 2.8E-43 296.9 35.3 324 13-369 1-337 (337)
51 PRK05396 tdh L-threonine 3-deh 100.0 1.4E-38 3E-43 297.1 34.5 327 13-370 1-341 (341)
52 cd08287 FDH_like_ADH3 formalde 100.0 1.3E-38 2.8E-43 297.8 34.2 326 13-369 1-345 (345)
53 TIGR01751 crot-CoA-red crotony 100.0 1.4E-38 3.1E-43 302.7 33.4 333 9-370 4-388 (398)
54 cd08291 ETR_like_1 2-enoyl thi 100.0 8.8E-39 1.9E-43 296.3 30.0 299 13-368 1-324 (324)
55 PRK13771 putative alcohol dehy 100.0 1.6E-38 3.5E-43 295.9 31.5 319 13-369 1-333 (334)
56 PRK09422 ethanol-active dehydr 100.0 4.8E-38 1E-42 293.1 34.1 325 13-370 1-337 (338)
57 cd08242 MDR_like Medium chain 100.0 4.7E-38 1E-42 290.9 33.7 311 13-369 1-319 (319)
58 cd08235 iditol_2_DH_like L-idi 100.0 5.8E-38 1.3E-42 293.2 34.5 325 13-368 1-343 (343)
59 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 7.7E-38 1.7E-42 291.6 33.9 324 13-369 1-338 (338)
60 cd08265 Zn_ADH3 Alcohol dehydr 100.0 8.6E-38 1.9E-42 296.0 34.4 328 12-367 28-383 (384)
61 cd08262 Zn_ADH8 Alcohol dehydr 100.0 7.8E-38 1.7E-42 292.1 33.6 315 13-368 1-341 (341)
62 cd05281 TDH Threonine dehydrog 100.0 1.3E-37 2.8E-42 290.6 34.4 326 13-369 1-341 (341)
63 cd08282 PFDH_like Pseudomonas 100.0 1.5E-37 3.3E-42 293.5 34.7 332 13-369 1-375 (375)
64 cd05285 sorbitol_DH Sorbitol d 100.0 1.4E-37 3.1E-42 290.5 33.1 322 15-367 1-341 (343)
65 cd05283 CAD1 Cinnamyl alcohol 100.0 1.4E-37 3.1E-42 289.7 32.7 324 14-368 1-337 (337)
66 cd08236 sugar_DH NAD(P)-depend 100.0 3.7E-37 8E-42 287.8 33.7 327 13-367 1-343 (343)
67 cd08297 CAD3 Cinnamyl alcohol 100.0 5.6E-37 1.2E-41 286.3 34.7 324 13-369 1-341 (341)
68 TIGR03366 HpnZ_proposed putati 100.0 3E-38 6.5E-43 286.5 24.4 264 64-350 6-280 (280)
69 cd08259 Zn_ADH5 Alcohol dehydr 100.0 8.8E-37 1.9E-41 283.7 33.5 319 13-368 1-332 (332)
70 cd08292 ETR_like_2 2-enoyl thi 100.0 4.5E-37 9.8E-42 284.8 31.1 299 13-368 1-324 (324)
71 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.2E-36 2.7E-41 283.5 33.4 325 13-369 1-342 (342)
72 cd08234 threonine_DH_like L-th 100.0 1.8E-36 3.8E-41 282.1 33.7 321 13-367 1-333 (334)
73 PLN03154 putative allyl alcoho 100.0 8.7E-37 1.9E-41 285.0 31.6 304 10-370 6-346 (348)
74 KOG0025 Zn2+-binding dehydroge 100.0 4.3E-37 9.3E-42 262.1 26.3 311 2-369 10-352 (354)
75 cd08232 idonate-5-DH L-idonate 100.0 2.3E-36 5E-41 281.9 32.7 322 17-369 2-339 (339)
76 cd08295 double_bond_reductase_ 100.0 7.8E-37 1.7E-41 284.9 29.3 300 12-369 7-338 (338)
77 TIGR00692 tdh L-threonine 3-de 100.0 3.5E-36 7.6E-41 280.8 33.1 323 18-369 4-340 (340)
78 cd08298 CAD2 Cinnamyl alcohol 100.0 6.1E-36 1.3E-40 277.9 32.4 313 13-367 1-329 (329)
79 cd08294 leukotriene_B4_DH_like 100.0 5E-36 1.1E-40 278.4 30.6 297 12-369 2-329 (329)
80 cd08264 Zn_ADH_like2 Alcohol d 100.0 4.7E-36 1E-40 278.2 30.4 311 13-365 1-324 (325)
81 cd08245 CAD Cinnamyl alcohol d 100.0 1.4E-35 3.1E-40 275.6 31.9 318 14-367 1-330 (330)
82 TIGR02825 B4_12hDH leukotriene 100.0 1.1E-35 2.5E-40 275.6 30.4 284 25-368 19-325 (325)
83 cd08293 PTGR2 Prostaglandin re 100.0 3.8E-35 8.2E-40 274.4 31.7 289 25-369 23-345 (345)
84 cd08274 MDR9 Medium chain dehy 100.0 6.9E-35 1.5E-39 273.1 31.3 313 13-369 1-350 (350)
85 PRK10754 quinone oxidoreductas 100.0 1.4E-34 3E-39 268.6 30.3 306 12-369 1-327 (327)
86 cd08276 MDR7 Medium chain dehy 100.0 4.3E-34 9.3E-39 266.0 33.7 320 13-369 1-336 (336)
87 cd08258 Zn_ADH4 Alcohol dehydr 100.0 2.2E-34 4.8E-39 264.5 30.7 290 13-333 1-306 (306)
88 cd08244 MDR_enoyl_red Possible 100.0 4.9E-34 1.1E-38 264.4 32.2 302 13-369 1-324 (324)
89 cd08290 ETR 2-enoyl thioester 100.0 2.1E-34 4.6E-39 268.9 29.0 302 13-369 1-341 (341)
90 PTZ00354 alcohol dehydrogenase 100.0 1.6E-33 3.5E-38 262.0 32.1 303 12-370 1-329 (334)
91 KOG1198 Zinc-binding oxidoredu 100.0 2.5E-34 5.3E-39 264.0 25.8 291 25-370 20-346 (347)
92 TIGR02817 adh_fam_1 zinc-bindi 100.0 9.5E-34 2E-38 264.0 29.9 299 14-368 1-334 (336)
93 cd08250 Mgc45594_like Mgc45594 100.0 1E-33 2.2E-38 263.0 29.5 301 12-368 1-329 (329)
94 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 5.4E-33 1.2E-37 257.5 32.7 301 13-369 1-325 (325)
95 cd08270 MDR4 Medium chain dehy 100.0 2.9E-33 6.3E-38 257.1 29.9 292 13-369 1-305 (305)
96 cd08249 enoyl_reductase_like e 100.0 2.6E-33 5.7E-38 261.2 29.4 306 13-369 1-339 (339)
97 cd05282 ETR_like 2-enoyl thioe 100.0 6E-33 1.3E-37 257.0 29.5 288 25-368 14-323 (323)
98 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.8E-32 6.2E-37 251.3 32.0 291 20-367 3-311 (312)
99 COG2130 Putative NADP-dependen 100.0 5.2E-33 1.1E-37 239.6 24.7 285 25-371 27-340 (340)
100 cd08243 quinone_oxidoreductase 100.0 4.1E-32 8.9E-37 250.9 30.1 301 13-367 1-319 (320)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 6E-32 1.3E-36 250.7 30.8 304 13-369 1-326 (326)
102 TIGR02823 oxido_YhdH putative 100.0 8.6E-32 1.9E-36 249.4 31.6 301 14-369 1-323 (323)
103 cd08252 AL_MDR Arginate lyase 100.0 8.6E-32 1.9E-36 250.7 31.5 303 13-368 1-336 (336)
104 cd05286 QOR2 Quinone oxidoredu 100.0 9.3E-31 2E-35 241.2 31.8 299 14-369 1-320 (320)
105 cd08272 MDR6 Medium chain dehy 100.0 5.2E-31 1.1E-35 243.9 30.1 301 13-369 1-326 (326)
106 cd08253 zeta_crystallin Zeta-c 100.0 8.4E-31 1.8E-35 242.2 31.1 306 13-369 1-325 (325)
107 cd05276 p53_inducible_oxidored 100.0 9.7E-31 2.1E-35 241.4 31.4 299 13-367 1-323 (323)
108 cd08248 RTN4I1 Human Reticulon 100.0 1.7E-31 3.7E-36 250.2 26.5 301 13-368 1-350 (350)
109 cd08288 MDR_yhdh Yhdh putative 100.0 1.4E-30 3.1E-35 241.3 31.5 302 13-369 1-324 (324)
110 cd08247 AST1_like AST1 is a cy 100.0 1.5E-30 3.3E-35 243.9 30.8 306 14-369 2-352 (352)
111 cd05288 PGDH Prostaglandin deh 100.0 1E-30 2.2E-35 242.8 28.6 294 14-367 3-329 (329)
112 cd08271 MDR5 Medium chain dehy 100.0 2.1E-30 4.6E-35 240.0 30.6 304 13-369 1-325 (325)
113 cd05188 MDR Medium chain reduc 100.0 7.7E-31 1.7E-35 236.4 25.9 258 39-329 1-270 (271)
114 cd08273 MDR8 Medium chain dehy 100.0 6.1E-30 1.3E-34 237.7 29.8 295 14-367 2-330 (331)
115 cd08268 MDR2 Medium chain dehy 100.0 1.9E-29 4.2E-34 233.5 30.8 306 13-369 1-328 (328)
116 TIGR02824 quinone_pig3 putativ 100.0 2.1E-29 4.5E-34 233.0 30.3 301 13-369 1-325 (325)
117 cd08251 polyketide_synthase po 100.0 2.5E-29 5.4E-34 230.3 28.7 282 32-367 2-303 (303)
118 cd08241 QOR1 Quinone oxidoredu 100.0 8.8E-29 1.9E-33 228.5 30.8 299 13-368 1-323 (323)
119 cd05289 MDR_like_2 alcohol deh 100.0 2.6E-29 5.6E-34 230.7 26.9 291 13-367 1-309 (309)
120 cd08275 MDR3 Medium chain dehy 100.0 4.9E-28 1.1E-32 225.3 32.8 300 14-369 1-337 (337)
121 cd08267 MDR1 Medium chain dehy 100.0 1.5E-28 3.1E-33 227.0 27.1 285 26-367 15-319 (319)
122 cd05195 enoyl_red enoyl reduct 100.0 3.8E-28 8.3E-33 220.7 26.6 274 38-367 1-293 (293)
123 smart00829 PKS_ER Enoylreducta 100.0 1.3E-27 2.9E-32 216.9 27.2 270 42-367 2-288 (288)
124 KOG1202 Animal-type fatty acid 100.0 3.1E-28 6.7E-33 238.5 16.6 283 25-370 1429-1742(2376)
125 cd08255 2-desacetyl-2-hydroxye 99.9 8.5E-25 1.8E-29 198.1 25.0 237 64-367 28-277 (277)
126 KOG1196 Predicted NAD-dependen 99.9 3.4E-24 7.3E-29 184.5 25.8 279 33-370 33-341 (343)
127 PF08240 ADH_N: Alcohol dehydr 99.8 1.7E-19 3.6E-24 139.5 7.8 98 37-155 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 6.4E-17 1.4E-21 129.3 11.6 127 197-331 1-129 (130)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 1.5E-12 3.2E-17 122.0 16.0 175 176-370 190-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.3 4.6E-11 9.9E-16 114.9 16.0 154 184-342 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.2 1.1E-11 2.4E-16 98.4 1.9 120 230-367 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.6 3.8E-07 8.2E-12 82.3 10.1 163 181-357 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.6 8.1E-07 1.8E-11 85.6 12.5 106 185-292 162-288 (511)
134 PRK05476 S-adenosyl-L-homocyst 98.4 6.2E-06 1.3E-10 78.0 13.2 103 175-292 199-303 (425)
135 PRK08306 dipicolinate synthase 98.3 2.3E-05 5E-10 71.4 14.4 96 186-293 151-246 (296)
136 TIGR00936 ahcY adenosylhomocys 98.3 1.3E-05 2.7E-10 75.5 12.9 93 184-291 192-285 (406)
137 TIGR01035 hemA glutamyl-tRNA r 98.2 3.6E-07 7.8E-12 87.3 0.6 155 64-269 94-253 (417)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.2 5.7E-06 1.2E-10 76.0 8.2 107 151-269 140-251 (311)
139 PLN02494 adenosylhomocysteinas 98.1 3.1E-05 6.6E-10 73.6 12.0 101 175-290 241-343 (477)
140 PRK00517 prmA ribosomal protei 98.0 2.4E-05 5.2E-10 69.6 8.6 129 140-290 78-215 (250)
141 PTZ00075 Adenosylhomocysteinas 97.9 0.00017 3.7E-09 68.8 12.8 93 184-291 251-344 (476)
142 TIGR02853 spore_dpaA dipicolin 97.8 0.00016 3.5E-09 65.4 10.7 95 186-292 150-244 (287)
143 TIGR00518 alaDH alanine dehydr 97.8 0.00021 4.5E-09 67.2 11.2 99 186-292 166-271 (370)
144 PRK08324 short chain dehydroge 97.8 0.00022 4.8E-09 72.9 11.8 138 140-291 386-560 (681)
145 PRK12771 putative glutamate sy 97.8 3.8E-05 8.2E-10 76.7 5.9 80 183-268 133-234 (564)
146 PRK00045 hemA glutamyl-tRNA re 97.7 8.5E-05 1.8E-09 71.3 6.6 88 170-268 162-254 (423)
147 COG2518 Pcm Protein-L-isoaspar 97.6 0.00035 7.5E-09 59.2 9.0 112 164-288 52-170 (209)
148 PF01488 Shikimate_DH: Shikima 97.6 0.00023 5E-09 56.9 7.7 74 185-267 10-86 (135)
149 TIGR00406 prmA ribosomal prote 97.6 0.00051 1.1E-08 62.4 9.8 97 184-290 157-261 (288)
150 COG4221 Short-chain alcohol de 97.5 0.00091 2E-08 57.8 9.2 79 186-266 5-91 (246)
151 PF11017 DUF2855: Protein of u 97.4 0.016 3.5E-07 52.5 17.1 139 140-291 90-234 (314)
152 PRK00377 cbiT cobalt-precorrin 97.3 0.0034 7.4E-08 53.7 11.4 102 180-287 34-144 (198)
153 PRK05693 short chain dehydroge 97.2 0.0062 1.4E-07 54.8 12.3 77 188-266 2-82 (274)
154 PRK05786 fabG 3-ketoacyl-(acyl 97.2 0.0079 1.7E-07 52.7 12.6 103 186-291 4-138 (238)
155 PF02826 2-Hacid_dh_C: D-isome 97.2 0.0033 7.2E-08 52.8 9.3 89 185-288 34-127 (178)
156 PRK11705 cyclopropane fatty ac 97.2 0.0034 7.3E-08 59.4 10.3 108 171-288 152-267 (383)
157 PRK13943 protein-L-isoaspartat 97.1 0.0042 9E-08 57.1 10.4 100 180-287 74-179 (322)
158 TIGR00438 rrmJ cell division p 97.1 0.0091 2E-07 50.6 11.3 101 181-288 27-146 (188)
159 PF00670 AdoHcyase_NAD: S-aden 97.1 0.0043 9.3E-08 50.5 8.7 92 184-290 20-112 (162)
160 COG2242 CobL Precorrin-6B meth 97.1 0.0069 1.5E-07 50.3 9.9 104 180-290 28-137 (187)
161 PRK05993 short chain dehydroge 97.1 0.0052 1.1E-07 55.5 10.3 78 186-265 3-85 (277)
162 COG3967 DltE Short-chain dehyd 97.0 0.0047 1E-07 51.8 8.8 78 186-265 4-87 (245)
163 PF13460 NAD_binding_10: NADH( 97.0 0.0064 1.4E-07 51.0 9.9 93 190-291 1-100 (183)
164 PRK12742 oxidoreductase; Provi 96.9 0.027 5.9E-07 49.3 13.4 77 186-266 5-85 (237)
165 COG1748 LYS9 Saccharopine dehy 96.9 0.011 2.3E-07 55.4 11.0 97 188-291 2-102 (389)
166 PRK06182 short chain dehydroge 96.9 0.0071 1.5E-07 54.4 9.6 79 186-266 2-84 (273)
167 KOG1205 Predicted dehydrogenas 96.9 0.017 3.6E-07 51.8 11.4 110 186-297 11-158 (282)
168 COG0300 DltE Short-chain dehyd 96.8 0.014 3E-07 51.8 10.7 80 184-266 3-94 (265)
169 PRK07326 short chain dehydroge 96.8 0.022 4.8E-07 49.8 12.2 79 186-266 5-92 (237)
170 KOG1209 1-Acyl dihydroxyaceton 96.8 0.01 2.2E-07 50.1 9.0 80 186-266 6-91 (289)
171 PF01262 AlaDh_PNT_C: Alanine 96.8 0.0047 1E-07 51.3 7.1 100 187-289 20-140 (168)
172 PLN03209 translocon at the inn 96.8 0.021 4.5E-07 56.2 12.4 105 180-291 73-210 (576)
173 cd01080 NAD_bind_m-THF_DH_Cycl 96.8 0.018 3.9E-07 47.7 10.1 97 165-291 22-119 (168)
174 TIGR02469 CbiT precorrin-6Y C5 96.7 0.019 4.2E-07 44.5 9.9 100 180-287 13-121 (124)
175 PRK04148 hypothetical protein; 96.7 0.013 2.8E-07 46.2 8.6 94 185-287 15-108 (134)
176 PRK12828 short chain dehydroge 96.7 0.031 6.8E-07 48.8 12.2 79 186-266 6-92 (239)
177 PRK03369 murD UDP-N-acetylmura 96.7 0.012 2.7E-07 57.6 10.4 74 183-267 8-81 (488)
178 PRK07109 short chain dehydroge 96.6 0.032 7E-07 51.9 12.3 79 186-266 7-95 (334)
179 TIGR01470 cysG_Nterm siroheme 96.6 0.084 1.8E-06 45.3 13.9 104 186-300 8-112 (205)
180 PRK13940 glutamyl-tRNA reducta 96.6 0.019 4.2E-07 54.7 10.8 76 185-269 179-255 (414)
181 PRK14967 putative methyltransf 96.6 0.12 2.6E-06 45.0 15.0 96 181-287 31-158 (223)
182 PRK08265 short chain dehydroge 96.6 0.043 9.3E-07 49.0 12.5 79 186-266 5-90 (261)
183 PRK08017 oxidoreductase; Provi 96.6 0.017 3.7E-07 51.2 9.8 77 188-266 3-84 (256)
184 PRK07806 short chain dehydroge 96.6 0.046 1E-06 48.2 12.5 101 186-289 5-135 (248)
185 PRK06139 short chain dehydroge 96.6 0.012 2.5E-07 54.7 8.9 79 186-266 6-94 (330)
186 PRK12550 shikimate 5-dehydroge 96.5 0.021 4.6E-07 51.3 9.8 70 183-266 118-188 (272)
187 PF13241 NAD_binding_7: Putati 96.5 0.021 4.7E-07 43.1 8.4 94 186-296 6-99 (103)
188 PRK08177 short chain dehydroge 96.5 0.021 4.6E-07 49.7 9.5 77 188-266 2-81 (225)
189 COG0686 Ald Alanine dehydrogen 96.5 0.011 2.4E-07 52.7 7.6 97 187-292 168-272 (371)
190 TIGR01809 Shik-DH-AROM shikima 96.5 0.012 2.6E-07 53.3 8.0 76 186-267 124-201 (282)
191 PRK06718 precorrin-2 dehydroge 96.5 0.1 2.3E-06 44.6 13.4 104 186-301 9-113 (202)
192 PRK13942 protein-L-isoaspartat 96.5 0.0094 2E-07 51.6 6.9 99 179-287 69-175 (212)
193 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.054 1.2E-06 52.6 12.8 78 186-265 209-293 (450)
194 PRK08261 fabG 3-ketoacyl-(acyl 96.4 0.0072 1.6E-07 58.7 6.6 94 180-291 27-126 (450)
195 PRK07060 short chain dehydroge 96.4 0.019 4.2E-07 50.5 8.9 75 186-266 8-87 (245)
196 PF12847 Methyltransf_18: Meth 96.4 0.0093 2E-07 45.6 5.9 91 186-286 1-109 (112)
197 COG1179 Dinucleotide-utilizing 96.4 0.054 1.2E-06 46.8 10.8 104 186-292 29-157 (263)
198 PRK05872 short chain dehydroge 96.4 0.021 4.5E-07 52.2 9.2 79 186-266 8-95 (296)
199 PRK13944 protein-L-isoaspartat 96.4 0.026 5.6E-07 48.5 9.3 99 180-287 66-172 (205)
200 PRK06057 short chain dehydroge 96.4 0.027 5.8E-07 50.0 9.7 79 186-266 6-89 (255)
201 COG0169 AroE Shikimate 5-dehyd 96.4 0.0092 2E-07 53.6 6.5 45 185-229 124-168 (283)
202 COG2264 PrmA Ribosomal protein 96.4 0.051 1.1E-06 49.0 11.1 102 183-292 159-267 (300)
203 cd05311 NAD_bind_2_malic_enz N 96.4 0.071 1.5E-06 46.6 11.8 91 185-288 23-128 (226)
204 PF01135 PCMT: Protein-L-isoas 96.4 0.0065 1.4E-07 52.2 5.3 102 179-289 65-174 (209)
205 COG0373 HemA Glutamyl-tRNA red 96.4 0.09 1.9E-06 49.7 13.1 98 185-292 176-278 (414)
206 PF02353 CMAS: Mycolic acid cy 96.3 0.0098 2.1E-07 53.5 6.4 98 178-288 54-166 (273)
207 PRK08628 short chain dehydroge 96.3 0.074 1.6E-06 47.2 12.1 79 186-266 6-93 (258)
208 PRK06719 precorrin-2 dehydroge 96.3 0.11 2.4E-06 42.6 11.9 90 186-289 12-101 (157)
209 COG2226 UbiE Methylase involve 96.3 0.049 1.1E-06 47.6 10.2 106 180-292 45-160 (238)
210 PRK06949 short chain dehydroge 96.2 0.031 6.8E-07 49.6 9.4 80 185-266 7-96 (258)
211 PF06325 PrmA: Ribosomal prote 96.2 0.0075 1.6E-07 54.6 5.2 96 184-292 159-263 (295)
212 CHL00194 ycf39 Ycf39; Provisio 96.2 0.064 1.4E-06 49.4 11.6 95 189-290 2-111 (317)
213 PRK07825 short chain dehydroge 96.2 0.035 7.6E-07 49.9 9.6 78 187-266 5-88 (273)
214 PRK12939 short chain dehydroge 96.2 0.075 1.6E-06 46.8 11.6 79 186-266 6-94 (250)
215 PRK06841 short chain dehydroge 96.2 0.031 6.7E-07 49.5 9.2 79 186-266 14-99 (255)
216 PRK07832 short chain dehydroge 96.2 0.093 2E-06 47.1 12.3 76 189-266 2-88 (272)
217 COG2230 Cfa Cyclopropane fatty 96.2 0.035 7.6E-07 49.6 9.2 103 175-292 61-180 (283)
218 TIGR01318 gltD_gamma_fam gluta 96.2 0.027 5.9E-07 54.9 9.3 77 186-267 140-237 (467)
219 PRK07831 short chain dehydroge 96.2 0.038 8.3E-07 49.3 9.7 81 184-266 14-107 (262)
220 PRK07502 cyclohexadienyl dehyd 96.2 0.052 1.1E-06 49.8 10.7 92 188-290 7-102 (307)
221 PRK06953 short chain dehydroge 96.1 0.045 9.7E-07 47.5 9.6 77 188-266 2-80 (222)
222 TIGR02356 adenyl_thiF thiazole 96.1 0.049 1.1E-06 46.7 9.6 35 186-220 20-54 (202)
223 PLN02780 ketoreductase/ oxidor 96.1 0.043 9.3E-07 50.7 9.9 79 186-265 52-141 (320)
224 cd01065 NAD_bind_Shikimate_DH 96.1 0.041 9E-07 44.8 8.8 74 185-267 17-92 (155)
225 PRK14175 bifunctional 5,10-met 96.1 0.062 1.4E-06 48.3 10.4 95 166-291 137-233 (286)
226 PRK08267 short chain dehydroge 96.1 0.12 2.6E-06 45.9 12.5 77 188-266 2-87 (260)
227 PRK12809 putative oxidoreducta 96.1 0.032 6.8E-07 56.7 9.6 76 186-267 309-406 (639)
228 PRK07814 short chain dehydroge 96.1 0.039 8.4E-07 49.3 9.2 79 186-266 9-97 (263)
229 PRK07231 fabG 3-ketoacyl-(acyl 96.1 0.031 6.8E-07 49.3 8.5 79 186-266 4-91 (251)
230 PRK12829 short chain dehydroge 96.1 0.033 7.2E-07 49.6 8.7 81 184-266 8-96 (264)
231 PRK06200 2,3-dihydroxy-2,3-dih 96.1 0.042 9E-07 49.1 9.3 78 186-265 5-89 (263)
232 TIGR03325 BphB_TodD cis-2,3-di 96.1 0.041 8.8E-07 49.1 9.2 78 186-265 4-88 (262)
233 PRK00107 gidB 16S rRNA methylt 96.0 0.038 8.3E-07 46.7 8.3 96 184-288 43-145 (187)
234 PRK06484 short chain dehydroge 96.0 0.1 2.3E-06 51.6 12.7 105 185-292 267-404 (520)
235 TIGR00080 pimt protein-L-isoas 96.0 0.021 4.6E-07 49.4 6.9 98 180-287 71-176 (215)
236 PRK08618 ornithine cyclodeamin 96.0 0.13 2.7E-06 47.7 12.4 95 185-292 125-225 (325)
237 PRK09291 short chain dehydroge 96.0 0.042 9.1E-07 48.7 9.1 73 187-265 2-82 (257)
238 PRK09186 flagellin modificatio 96.0 0.15 3.2E-06 45.2 12.5 78 186-265 3-92 (256)
239 PRK06500 short chain dehydroge 96.0 0.059 1.3E-06 47.5 9.9 79 186-266 5-90 (249)
240 PRK06180 short chain dehydroge 96.0 0.056 1.2E-06 48.7 9.6 79 186-266 3-88 (277)
241 COG0031 CysK Cysteine synthase 96.0 0.25 5.4E-06 44.6 13.3 57 180-237 55-114 (300)
242 PRK06128 oxidoreductase; Provi 95.9 0.14 3.1E-06 46.7 12.3 79 186-266 54-144 (300)
243 PF03435 Saccharop_dh: Sacchar 95.9 0.058 1.3E-06 51.3 10.0 90 190-286 1-96 (386)
244 PRK08217 fabG 3-ketoacyl-(acyl 95.9 0.061 1.3E-06 47.4 9.6 78 186-265 4-91 (253)
245 PF03446 NAD_binding_2: NAD bi 95.9 0.12 2.6E-06 42.6 10.7 88 189-290 3-96 (163)
246 COG2519 GCD14 tRNA(1-methylade 95.9 0.041 8.9E-07 48.0 7.9 103 180-290 88-197 (256)
247 cd01078 NAD_bind_H4MPT_DH NADP 95.9 0.21 4.5E-06 42.4 12.3 76 186-268 27-109 (194)
248 TIGR01832 kduD 2-deoxy-D-gluco 95.8 0.079 1.7E-06 46.7 10.0 79 186-266 4-90 (248)
249 PRK05866 short chain dehydroge 95.8 0.073 1.6E-06 48.5 9.9 79 186-266 39-127 (293)
250 PRK07402 precorrin-6B methylas 95.8 0.19 4.1E-06 42.8 11.8 101 180-288 34-142 (196)
251 PRK05867 short chain dehydroge 95.8 0.059 1.3E-06 47.8 9.1 79 186-266 8-96 (253)
252 PRK08263 short chain dehydroge 95.8 0.12 2.6E-06 46.5 11.2 78 187-266 3-87 (275)
253 PRK08339 short chain dehydroge 95.8 0.076 1.6E-06 47.5 9.8 79 186-266 7-95 (263)
254 PRK07904 short chain dehydroge 95.8 0.09 2E-06 46.7 10.2 82 183-266 4-97 (253)
255 PRK06196 oxidoreductase; Provi 95.8 0.069 1.5E-06 49.2 9.6 78 186-265 25-108 (315)
256 COG2910 Putative NADH-flavin r 95.8 0.073 1.6E-06 44.1 8.3 94 189-292 2-108 (211)
257 PRK07523 gluconate 5-dehydroge 95.7 0.063 1.4E-06 47.6 8.9 79 186-266 9-97 (255)
258 PRK12548 shikimate 5-dehydroge 95.7 0.1 2.2E-06 47.5 10.2 37 185-221 124-160 (289)
259 PRK07774 short chain dehydroge 95.7 0.077 1.7E-06 46.8 9.4 79 186-266 5-93 (250)
260 PRK07454 short chain dehydroge 95.7 0.1 2.2E-06 45.8 10.1 79 186-266 5-93 (241)
261 PRK12769 putative oxidoreducta 95.7 0.052 1.1E-06 55.4 9.2 76 185-266 325-422 (654)
262 PF02254 TrkA_N: TrkA-N domain 95.7 0.28 6E-06 37.6 11.3 92 190-287 1-95 (116)
263 PRK06505 enoyl-(acyl carrier p 95.7 0.075 1.6E-06 47.8 9.2 78 186-265 6-94 (271)
264 PRK05653 fabG 3-ketoacyl-(acyl 95.7 0.094 2E-06 45.9 9.7 79 186-266 4-92 (246)
265 COG4122 Predicted O-methyltran 95.7 0.16 3.5E-06 43.7 10.6 104 181-288 54-166 (219)
266 PRK07576 short chain dehydroge 95.7 0.055 1.2E-06 48.4 8.3 78 186-265 8-95 (264)
267 PRK12429 3-hydroxybutyrate deh 95.7 0.15 3.3E-06 45.1 11.1 79 186-266 3-91 (258)
268 PRK07478 short chain dehydroge 95.6 0.097 2.1E-06 46.4 9.7 79 186-266 5-93 (254)
269 PRK11207 tellurite resistance 95.6 0.05 1.1E-06 46.5 7.5 98 181-288 25-134 (197)
270 PF02670 DXP_reductoisom: 1-de 95.6 0.24 5.2E-06 38.9 10.5 92 190-287 1-119 (129)
271 PRK07063 short chain dehydroge 95.6 0.074 1.6E-06 47.3 8.9 79 186-266 6-96 (260)
272 PRK09072 short chain dehydroge 95.6 0.1 2.2E-06 46.5 9.8 79 186-266 4-90 (263)
273 PRK15116 sulfur acceptor prote 95.6 0.27 5.9E-06 43.9 12.2 35 186-220 29-63 (268)
274 PRK08594 enoyl-(acyl carrier p 95.6 0.21 4.5E-06 44.5 11.7 78 186-265 6-96 (257)
275 cd01075 NAD_bind_Leu_Phe_Val_D 95.6 0.12 2.5E-06 44.3 9.5 81 185-278 26-107 (200)
276 PRK05717 oxidoreductase; Valid 95.6 0.1 2.3E-06 46.2 9.7 79 186-266 9-94 (255)
277 PF03807 F420_oxidored: NADP o 95.5 0.52 1.1E-05 34.7 12.0 85 189-287 1-93 (96)
278 PRK07677 short chain dehydroge 95.5 0.091 2E-06 46.5 9.1 78 187-266 1-88 (252)
279 PRK06198 short chain dehydroge 95.5 0.086 1.9E-06 46.8 9.0 80 186-266 5-94 (260)
280 PRK07062 short chain dehydroge 95.5 0.081 1.8E-06 47.2 8.9 79 186-266 7-97 (265)
281 PRK13394 3-hydroxybutyrate deh 95.5 0.1 2.3E-06 46.3 9.5 79 186-266 6-94 (262)
282 PRK05884 short chain dehydroge 95.5 0.14 2.9E-06 44.6 10.0 74 189-265 2-78 (223)
283 PRK00811 spermidine synthase; 95.5 0.11 2.4E-06 47.1 9.6 95 185-287 75-190 (283)
284 PRK07024 short chain dehydroge 95.5 0.11 2.5E-06 46.1 9.6 78 187-266 2-88 (257)
285 PRK06179 short chain dehydroge 95.5 0.065 1.4E-06 48.0 8.1 77 186-266 3-83 (270)
286 TIGR00507 aroE shikimate 5-deh 95.5 0.16 3.5E-06 45.6 10.5 93 184-289 114-215 (270)
287 PRK06483 dihydromonapterin red 95.5 0.14 3E-06 44.8 9.9 78 187-266 2-84 (236)
288 PRK06079 enoyl-(acyl carrier p 95.4 0.099 2.1E-06 46.4 9.0 78 186-265 6-92 (252)
289 PRK06194 hypothetical protein; 95.4 0.11 2.4E-06 46.9 9.5 79 186-266 5-93 (287)
290 PRK06940 short chain dehydroge 95.4 0.26 5.7E-06 44.3 11.9 76 188-266 3-86 (275)
291 PRK08703 short chain dehydroge 95.4 0.076 1.6E-06 46.6 8.1 80 186-266 5-97 (239)
292 PF08704 GCD14: tRNA methyltra 95.4 0.049 1.1E-06 48.0 6.7 106 178-289 32-147 (247)
293 PRK12823 benD 1,6-dihydroxycyc 95.4 0.12 2.5E-06 46.0 9.4 78 186-265 7-93 (260)
294 PRK07890 short chain dehydroge 95.4 0.13 2.8E-06 45.6 9.6 79 186-266 4-92 (258)
295 PRK08317 hypothetical protein; 95.4 0.065 1.4E-06 46.9 7.6 101 179-288 12-124 (241)
296 KOG1014 17 beta-hydroxysteroid 95.4 0.14 3E-06 46.0 9.5 78 186-266 48-136 (312)
297 PRK04457 spermidine synthase; 95.4 0.31 6.7E-06 43.6 11.9 94 185-286 65-175 (262)
298 PRK05876 short chain dehydroge 95.4 0.12 2.6E-06 46.6 9.4 78 186-265 5-92 (275)
299 PRK07574 formate dehydrogenase 95.4 0.19 4.2E-06 47.4 10.9 89 186-288 191-284 (385)
300 PRK06482 short chain dehydroge 95.4 0.12 2.6E-06 46.4 9.4 77 188-266 3-86 (276)
301 PLN02366 spermidine synthase 95.3 0.15 3.2E-06 46.7 9.9 103 184-288 89-206 (308)
302 cd00757 ThiF_MoeB_HesA_family 95.3 0.19 4.2E-06 43.9 10.3 35 187-221 21-55 (228)
303 PRK06172 short chain dehydroge 95.3 0.12 2.6E-06 45.7 9.2 79 186-266 6-94 (253)
304 TIGR00477 tehB tellurite resis 95.3 0.091 2E-06 44.7 8.1 96 182-288 26-133 (195)
305 PRK13243 glyoxylate reductase; 95.3 0.16 3.5E-06 47.1 10.2 87 186-288 149-240 (333)
306 PRK05562 precorrin-2 dehydroge 95.3 0.91 2E-05 39.4 14.1 113 186-310 24-138 (223)
307 cd00755 YgdL_like Family of ac 95.3 0.27 5.8E-06 43.0 11.0 35 187-221 11-45 (231)
308 PRK12937 short chain dehydroge 95.3 0.4 8.6E-06 42.0 12.5 79 186-266 4-93 (245)
309 PRK12481 2-deoxy-D-gluconate 3 95.3 0.15 3.2E-06 45.3 9.6 79 186-266 7-93 (251)
310 COG3288 PntA NAD/NADP transhyd 95.3 0.22 4.9E-06 44.6 10.3 128 183-312 160-307 (356)
311 PRK06701 short chain dehydroge 95.3 0.38 8.2E-06 43.7 12.5 80 185-266 44-134 (290)
312 PRK07533 enoyl-(acyl carrier p 95.3 0.13 2.8E-06 45.8 9.3 78 186-265 9-97 (258)
313 PRK08589 short chain dehydroge 95.3 0.11 2.4E-06 46.7 8.9 79 186-266 5-92 (272)
314 PRK12549 shikimate 5-dehydroge 95.3 0.078 1.7E-06 48.1 7.8 42 186-227 126-167 (284)
315 PRK08085 gluconate 5-dehydroge 95.3 0.18 3.8E-06 44.7 10.1 79 186-266 8-96 (254)
316 PRK08213 gluconate 5-dehydroge 95.3 0.14 3E-06 45.5 9.5 79 186-266 11-99 (259)
317 PRK10538 malonic semialdehyde 95.3 0.13 2.9E-06 45.3 9.2 76 189-266 2-84 (248)
318 TIGR03215 ac_ald_DH_ac acetald 95.2 0.3 6.5E-06 44.1 11.3 87 189-287 3-93 (285)
319 PF13823 ADH_N_assoc: Alcohol 95.2 0.021 4.7E-07 29.9 2.3 22 13-35 1-22 (23)
320 PRK06463 fabG 3-ketoacyl-(acyl 95.2 0.15 3.2E-06 45.3 9.4 79 186-266 6-89 (255)
321 PRK06138 short chain dehydroge 95.2 0.13 2.7E-06 45.5 9.0 79 186-266 4-91 (252)
322 PLN02781 Probable caffeoyl-CoA 95.2 0.2 4.3E-06 44.0 10.0 104 180-287 62-177 (234)
323 PRK06181 short chain dehydroge 95.2 0.14 3E-06 45.6 9.3 78 187-266 1-88 (263)
324 PRK08251 short chain dehydroge 95.2 0.17 3.6E-06 44.6 9.7 77 187-265 2-90 (248)
325 cd01483 E1_enzyme_family Super 95.2 0.22 4.8E-06 40.0 9.6 32 189-220 1-32 (143)
326 TIGR02355 moeB molybdopterin s 95.2 0.13 2.8E-06 45.4 8.7 35 187-221 24-58 (240)
327 PRK07985 oxidoreductase; Provi 95.2 0.34 7.3E-06 44.1 11.8 103 186-291 48-188 (294)
328 PRK05875 short chain dehydroge 95.2 0.16 3.4E-06 45.6 9.6 78 186-265 6-95 (276)
329 PRK08690 enoyl-(acyl carrier p 95.2 0.15 3.3E-06 45.5 9.3 79 186-266 5-94 (261)
330 PRK07067 sorbitol dehydrogenas 95.1 0.18 3.9E-06 44.7 9.8 78 186-265 5-89 (257)
331 PRK06125 short chain dehydroge 95.1 0.13 2.8E-06 45.8 8.8 77 186-266 6-91 (259)
332 PRK09242 tropinone reductase; 95.1 0.11 2.3E-06 46.2 8.2 79 186-266 8-98 (257)
333 PRK05854 short chain dehydroge 95.1 0.17 3.6E-06 46.6 9.7 79 186-266 13-103 (313)
334 PRK06484 short chain dehydroge 95.1 0.13 2.8E-06 50.9 9.6 79 186-266 4-89 (520)
335 PRK08415 enoyl-(acyl carrier p 95.1 0.18 3.8E-06 45.5 9.7 104 186-292 4-147 (274)
336 PRK03562 glutathione-regulated 95.1 0.12 2.7E-06 52.2 9.5 77 187-269 400-477 (621)
337 PRK05690 molybdopterin biosynt 95.1 0.17 3.7E-06 44.8 9.3 35 187-221 32-66 (245)
338 PRK07856 short chain dehydroge 95.1 0.11 2.4E-06 45.9 8.3 77 186-266 5-85 (252)
339 PRK14103 trans-aconitate 2-met 95.1 0.39 8.5E-06 42.7 11.8 95 180-287 23-125 (255)
340 PRK10669 putative cation:proto 95.1 0.12 2.6E-06 51.6 9.4 75 188-267 418-492 (558)
341 PRK06914 short chain dehydroge 95.1 0.15 3.3E-06 45.8 9.3 77 187-266 3-91 (280)
342 PRK05447 1-deoxy-D-xylulose 5- 95.1 0.34 7.3E-06 45.4 11.4 94 188-287 2-120 (385)
343 PRK12367 short chain dehydroge 95.1 0.14 2.9E-06 45.4 8.7 72 187-266 14-89 (245)
344 PRK14027 quinate/shikimate deh 95.1 0.095 2.1E-06 47.4 7.7 43 185-227 125-167 (283)
345 PRK08862 short chain dehydroge 95.1 0.17 3.8E-06 44.1 9.3 78 186-265 4-92 (227)
346 PLN03139 formate dehydrogenase 95.1 0.23 5E-06 46.9 10.5 89 186-288 198-291 (386)
347 PRK07035 short chain dehydroge 95.1 0.16 3.5E-06 44.8 9.2 78 186-265 7-94 (252)
348 PRK08264 short chain dehydroge 95.1 0.11 2.4E-06 45.4 8.1 75 186-266 5-83 (238)
349 PLN00203 glutamyl-tRNA reducta 95.1 0.12 2.6E-06 50.8 8.9 96 187-291 266-372 (519)
350 PRK14192 bifunctional 5,10-met 95.0 0.23 4.9E-06 44.9 10.0 77 184-290 156-233 (283)
351 PRK06114 short chain dehydroge 95.0 0.2 4.2E-06 44.5 9.7 79 186-266 7-96 (254)
352 PLN02476 O-methyltransferase 95.0 0.27 5.9E-06 44.1 10.3 104 180-287 112-227 (278)
353 PRK08219 short chain dehydroge 95.0 0.24 5.2E-06 42.8 10.0 72 188-266 4-81 (227)
354 PRK08643 acetoin reductase; Va 95.0 0.17 3.6E-06 44.9 9.2 78 187-266 2-89 (256)
355 PRK00536 speE spermidine synth 95.0 0.1 2.3E-06 46.4 7.6 99 184-288 70-171 (262)
356 KOG1252 Cystathionine beta-syn 95.0 0.22 4.8E-06 45.2 9.6 56 180-236 96-155 (362)
357 PRK07577 short chain dehydroge 95.0 0.13 2.8E-06 44.9 8.3 73 187-266 3-78 (234)
358 PF00106 adh_short: short chai 95.0 0.12 2.6E-06 42.4 7.6 78 188-266 1-90 (167)
359 PRK07453 protochlorophyllide o 95.0 0.17 3.8E-06 46.6 9.5 78 186-265 5-92 (322)
360 PRK06603 enoyl-(acyl carrier p 95.0 0.18 3.9E-06 45.0 9.3 78 186-265 7-95 (260)
361 PLN02253 xanthoxin dehydrogena 95.0 0.16 3.4E-06 45.8 9.0 79 186-266 17-104 (280)
362 PRK07074 short chain dehydroge 95.0 0.2 4.3E-06 44.4 9.6 78 187-266 2-87 (257)
363 PRK12475 thiamine/molybdopteri 95.0 0.19 4.2E-06 46.7 9.6 35 187-221 24-58 (338)
364 PRK12826 3-ketoacyl-(acyl-carr 94.9 0.2 4.3E-06 44.1 9.4 79 186-266 5-93 (251)
365 PRK06077 fabG 3-ketoacyl-(acyl 94.9 0.69 1.5E-05 40.7 12.8 103 187-292 6-144 (252)
366 PRK06101 short chain dehydroge 94.9 0.25 5.4E-06 43.4 9.9 75 188-265 2-80 (240)
367 PRK14194 bifunctional 5,10-met 94.9 0.28 6E-06 44.5 10.1 94 166-290 138-233 (301)
368 PRK07340 ornithine cyclodeamin 94.9 0.18 4E-06 46.1 9.2 94 185-292 123-221 (304)
369 PRK08340 glucose-1-dehydrogena 94.9 0.2 4.4E-06 44.5 9.3 76 189-266 2-86 (259)
370 PRK06720 hypothetical protein; 94.8 0.32 6.9E-06 40.4 9.7 79 186-266 15-103 (169)
371 PRK08993 2-deoxy-D-gluconate 3 94.8 0.25 5.3E-06 43.8 9.8 79 186-266 9-95 (253)
372 PRK07097 gluconate 5-dehydroge 94.8 0.25 5.5E-06 44.0 9.9 79 186-266 9-97 (265)
373 PRK08226 short chain dehydroge 94.8 0.21 4.6E-06 44.4 9.4 79 186-266 5-92 (263)
374 PRK12936 3-ketoacyl-(acyl-carr 94.8 0.23 4.9E-06 43.5 9.5 79 186-266 5-90 (245)
375 PRK06124 gluconate 5-dehydroge 94.8 0.24 5.2E-06 43.8 9.7 79 186-266 10-98 (256)
376 PLN03075 nicotianamine synthas 94.8 0.21 4.6E-06 45.1 9.1 97 186-287 123-232 (296)
377 PRK15469 ghrA bifunctional gly 94.8 0.25 5.5E-06 45.4 9.8 87 186-288 135-226 (312)
378 PRK03659 glutathione-regulated 94.8 0.16 3.5E-06 51.2 9.2 92 188-286 401-496 (601)
379 PRK08644 thiamine biosynthesis 94.8 0.24 5.1E-06 42.8 9.1 34 187-220 28-61 (212)
380 PRK06197 short chain dehydroge 94.8 0.21 4.6E-06 45.7 9.4 78 186-265 15-104 (306)
381 PRK07666 fabG 3-ketoacyl-(acyl 94.8 0.22 4.7E-06 43.6 9.1 79 186-266 6-94 (239)
382 PRK08159 enoyl-(acyl carrier p 94.7 0.24 5.2E-06 44.5 9.5 80 184-265 7-97 (272)
383 PRK08762 molybdopterin biosynt 94.7 0.16 3.6E-06 48.0 8.7 35 186-220 134-168 (376)
384 PRK07417 arogenate dehydrogena 94.7 0.32 6.9E-06 44.0 10.3 67 189-267 2-68 (279)
385 PRK07688 thiamine/molybdopteri 94.7 0.2 4.4E-06 46.5 9.1 35 187-221 24-58 (339)
386 PRK07984 enoyl-(acyl carrier p 94.7 0.2 4.3E-06 44.8 8.8 78 186-265 5-93 (262)
387 PRK06398 aldose dehydrogenase; 94.7 0.13 2.8E-06 45.8 7.6 74 186-266 5-82 (258)
388 PRK08277 D-mannonate oxidoredu 94.7 0.23 5E-06 44.6 9.3 78 186-265 9-96 (278)
389 PRK06935 2-deoxy-D-gluconate 3 94.7 0.28 6.1E-06 43.5 9.7 78 186-266 14-101 (258)
390 TIGR02632 RhaD_aldol-ADH rhamn 94.6 0.23 4.9E-06 50.9 10.1 113 141-266 379-503 (676)
391 PRK14188 bifunctional 5,10-met 94.6 0.35 7.6E-06 43.9 10.1 94 166-291 137-233 (296)
392 KOG0725 Reductases with broad 94.6 0.21 4.5E-06 44.9 8.7 80 185-266 6-99 (270)
393 COG2227 UbiG 2-polyprenyl-3-me 94.6 0.35 7.5E-06 42.0 9.5 93 185-287 58-160 (243)
394 PF00899 ThiF: ThiF family; I 94.6 0.15 3.2E-06 40.5 7.0 34 187-220 2-35 (135)
395 PRK04266 fibrillarin; Provisio 94.6 0.71 1.5E-05 40.3 11.8 102 180-287 66-175 (226)
396 TIGR01505 tartro_sem_red 2-hyd 94.6 0.39 8.4E-06 43.7 10.6 70 189-271 1-70 (291)
397 KOG1502 Flavonol reductase/cin 94.6 0.24 5.2E-06 45.2 8.9 73 186-265 5-87 (327)
398 PF01408 GFO_IDH_MocA: Oxidore 94.6 0.55 1.2E-05 36.1 10.1 87 189-288 2-92 (120)
399 TIGR03206 benzo_BadH 2-hydroxy 94.6 0.27 5.8E-06 43.3 9.3 78 186-265 2-89 (250)
400 PRK01438 murD UDP-N-acetylmura 94.6 0.28 6E-06 48.1 10.2 69 186-266 15-88 (480)
401 PRK08328 hypothetical protein; 94.6 0.29 6.2E-06 42.9 9.2 35 187-221 27-61 (231)
402 KOG1201 Hydroxysteroid 17-beta 94.5 0.18 4E-06 45.1 7.8 79 186-266 37-124 (300)
403 PRK12743 oxidoreductase; Provi 94.5 0.31 6.8E-06 43.2 9.6 78 187-266 2-90 (256)
404 PLN02657 3,8-divinyl protochlo 94.5 0.2 4.4E-06 47.6 8.8 82 182-266 55-146 (390)
405 TIGR01963 PHB_DH 3-hydroxybuty 94.5 0.26 5.7E-06 43.4 9.1 77 188-266 2-88 (255)
406 PRK00258 aroE shikimate 5-dehy 94.5 0.11 2.4E-06 46.9 6.7 94 185-287 121-220 (278)
407 PRK12747 short chain dehydroge 94.5 1.1 2.5E-05 39.4 13.2 104 186-292 3-148 (252)
408 COG0569 TrkA K+ transport syst 94.5 0.3 6.5E-06 42.6 9.1 74 189-267 2-77 (225)
409 PRK08220 2,3-dihydroxybenzoate 94.5 0.65 1.4E-05 40.9 11.6 74 186-266 7-86 (252)
410 PRK08278 short chain dehydroge 94.5 0.29 6.3E-06 44.0 9.4 79 186-266 5-100 (273)
411 TIGR03840 TMPT_Se_Te thiopurin 94.5 0.35 7.5E-06 41.8 9.4 101 185-289 33-153 (213)
412 PRK12480 D-lactate dehydrogena 94.4 0.48 1.1E-05 43.9 10.9 85 186-288 145-234 (330)
413 cd01492 Aos1_SUMO Ubiquitin ac 94.4 0.28 6.1E-06 41.8 8.6 34 187-220 21-54 (197)
414 PLN02928 oxidoreductase family 94.4 0.4 8.7E-06 44.8 10.4 95 186-288 158-262 (347)
415 PRK01683 trans-aconitate 2-met 94.4 0.43 9.4E-06 42.5 10.3 97 180-287 25-129 (258)
416 PRK08287 cobalt-precorrin-6Y C 94.4 0.27 5.9E-06 41.4 8.6 97 180-287 25-130 (187)
417 PF02558 ApbA: Ketopantoate re 94.4 0.028 6E-07 45.6 2.4 93 190-288 1-101 (151)
418 PRK06113 7-alpha-hydroxysteroi 94.4 0.36 7.9E-06 42.7 9.8 79 186-266 10-98 (255)
419 PLN00141 Tic62-NAD(P)-related 94.4 0.28 6.1E-06 43.5 9.0 100 186-290 16-133 (251)
420 PRK08303 short chain dehydroge 94.4 0.34 7.3E-06 44.4 9.7 78 186-265 7-105 (305)
421 PRK12749 quinate/shikimate deh 94.4 0.16 3.5E-06 46.1 7.4 37 186-222 123-159 (288)
422 PRK01581 speE spermidine synth 94.4 0.77 1.7E-05 42.8 11.8 102 184-288 148-268 (374)
423 PLN02244 tocopherol O-methyltr 94.4 0.14 3.1E-06 47.7 7.2 94 185-288 117-223 (340)
424 PF01596 Methyltransf_3: O-met 94.3 0.13 2.8E-06 44.1 6.4 103 181-288 40-155 (205)
425 PRK12384 sorbitol-6-phosphate 94.3 0.29 6.2E-06 43.4 9.0 78 187-266 2-91 (259)
426 PF13478 XdhC_C: XdhC Rossmann 94.3 0.33 7.1E-06 38.7 8.2 34 190-224 1-34 (136)
427 COG2084 MmsB 3-hydroxyisobutyr 94.3 0.7 1.5E-05 41.6 11.1 88 189-290 2-97 (286)
428 PF05368 NmrA: NmrA-like famil 94.3 0.21 4.5E-06 43.7 7.9 69 190-265 1-73 (233)
429 PLN02256 arogenate dehydrogena 94.3 0.71 1.5E-05 42.2 11.5 95 180-289 29-128 (304)
430 cd01487 E1_ThiF_like E1_ThiF_l 94.3 0.32 7E-06 40.5 8.5 33 189-221 1-33 (174)
431 PF01210 NAD_Gly3P_dh_N: NAD-d 94.3 0.52 1.1E-05 38.5 9.7 84 189-279 1-91 (157)
432 PRK08300 acetaldehyde dehydrog 94.3 0.56 1.2E-05 42.6 10.5 91 188-287 5-100 (302)
433 PRK07791 short chain dehydroge 94.2 0.41 8.9E-06 43.3 9.9 80 185-266 4-102 (286)
434 TIGR00417 speE spermidine synt 94.2 0.76 1.7E-05 41.3 11.5 101 185-288 71-186 (270)
435 PRK00312 pcm protein-L-isoaspa 94.2 0.2 4.4E-06 43.2 7.4 96 180-287 72-174 (212)
436 PRK14618 NAD(P)H-dependent gly 94.2 0.6 1.3E-05 43.3 11.0 94 187-289 4-105 (328)
437 TIGR02622 CDP_4_6_dhtase CDP-g 94.2 0.15 3.3E-06 47.6 7.1 74 186-265 3-84 (349)
438 PRK07819 3-hydroxybutyryl-CoA 94.1 0.77 1.7E-05 41.7 11.4 38 188-226 6-43 (286)
439 PRK11036 putative S-adenosyl-L 94.1 0.52 1.1E-05 41.9 10.2 93 185-287 43-148 (255)
440 TIGR00872 gnd_rel 6-phosphoglu 94.1 0.81 1.8E-05 41.8 11.6 44 189-233 2-45 (298)
441 PRK13403 ketol-acid reductoiso 94.1 0.71 1.5E-05 42.2 10.8 86 186-287 15-104 (335)
442 PF07021 MetW: Methionine bios 94.1 0.35 7.5E-06 40.6 8.2 72 183-262 10-81 (193)
443 KOG0069 Glyoxylate/hydroxypyru 94.1 0.89 1.9E-05 41.8 11.5 48 185-233 160-207 (336)
444 PF02882 THF_DHG_CYH_C: Tetrah 94.1 0.51 1.1E-05 38.6 9.1 95 165-290 14-110 (160)
445 TIGR00715 precor6x_red precorr 94.1 0.18 4E-06 44.8 7.0 73 189-266 2-75 (256)
446 PLN02589 caffeoyl-CoA O-methyl 94.1 0.64 1.4E-05 41.1 10.3 102 181-286 74-188 (247)
447 PTZ00098 phosphoethanolamine N 94.0 0.24 5.2E-06 44.4 7.8 101 179-289 45-157 (263)
448 PRK14190 bifunctional 5,10-met 94.0 0.65 1.4E-05 41.8 10.4 95 166-291 137-233 (284)
449 PRK07102 short chain dehydroge 94.0 0.55 1.2E-05 41.2 10.1 76 188-266 2-86 (243)
450 TIGR02354 thiF_fam2 thiamine b 94.0 0.58 1.3E-05 40.0 9.8 34 187-220 21-54 (200)
451 PRK05597 molybdopterin biosynt 94.0 0.32 6.9E-06 45.6 8.8 35 187-221 28-62 (355)
452 PF01113 DapB_N: Dihydrodipico 94.0 0.64 1.4E-05 36.3 9.3 95 189-292 2-101 (124)
453 PRK05557 fabG 3-ketoacyl-(acyl 94.0 0.48 1E-05 41.4 9.7 79 186-266 4-93 (248)
454 PRK07370 enoyl-(acyl carrier p 94.0 0.33 7.1E-06 43.2 8.6 104 186-292 5-151 (258)
455 PRK11559 garR tartronate semia 94.0 0.72 1.6E-05 42.0 11.0 71 189-272 4-74 (296)
456 PRK12938 acetyacetyl-CoA reduc 93.9 0.27 5.9E-06 43.2 8.0 78 187-266 3-91 (246)
457 PRK00121 trmB tRNA (guanine-N( 93.9 1 2.2E-05 38.6 11.2 96 186-288 40-156 (202)
458 PF07991 IlvN: Acetohydroxy ac 93.9 1.3 2.9E-05 36.1 11.0 87 186-288 3-94 (165)
459 TIGR00138 gidB 16S rRNA methyl 93.9 0.17 3.6E-06 42.6 6.2 91 187-287 43-141 (181)
460 PRK07775 short chain dehydroge 93.9 0.5 1.1E-05 42.4 9.8 79 186-266 9-97 (274)
461 PRK05600 thiamine biosynthesis 93.9 0.4 8.7E-06 45.2 9.3 34 187-220 41-74 (370)
462 PRK06523 short chain dehydroge 93.9 0.28 6.1E-06 43.5 8.0 75 186-265 8-86 (260)
463 PLN02520 bifunctional 3-dehydr 93.9 0.26 5.7E-06 48.8 8.4 71 186-266 378-449 (529)
464 PRK09135 pteridine reductase; 93.8 0.49 1.1E-05 41.5 9.4 78 186-265 5-94 (249)
465 TIGR01532 E4PD_g-proteo D-eryt 93.8 0.39 8.5E-06 44.3 8.8 98 189-290 1-122 (325)
466 TIGR02752 MenG_heptapren 2-hep 93.8 0.3 6.5E-06 42.7 7.9 101 180-289 39-152 (231)
467 TIGR02415 23BDH acetoin reduct 93.8 0.51 1.1E-05 41.6 9.5 77 188-266 1-87 (254)
468 PRK14191 bifunctional 5,10-met 93.8 0.7 1.5E-05 41.6 10.1 94 166-290 136-231 (285)
469 PRK05650 short chain dehydroge 93.8 0.41 9E-06 42.8 9.0 76 189-266 2-87 (270)
470 cd05212 NAD_bind_m-THF_DH_Cycl 93.8 0.9 2E-05 36.3 9.8 95 166-291 7-103 (140)
471 PF01370 Epimerase: NAD depend 93.8 0.2 4.3E-06 43.6 6.7 71 190-266 1-75 (236)
472 PRK06522 2-dehydropantoate 2-r 93.8 0.42 9.1E-06 43.6 9.1 85 189-278 2-87 (304)
473 PRK06141 ornithine cyclodeamin 93.7 1.1 2.3E-05 41.4 11.6 93 185-290 123-221 (314)
474 PRK06997 enoyl-(acyl carrier p 93.7 0.46 9.9E-06 42.4 9.0 79 186-266 5-94 (260)
475 COG1648 CysG Siroheme synthase 93.7 1.5 3.2E-05 37.8 11.6 113 186-309 11-124 (210)
476 PRK06849 hypothetical protein; 93.7 0.73 1.6E-05 43.8 10.8 92 186-279 3-99 (389)
477 cd05211 NAD_bind_Glu_Leu_Phe_V 93.7 0.47 1E-05 41.1 8.6 78 185-267 21-108 (217)
478 PRK12746 short chain dehydroge 93.7 1.4 3E-05 38.8 12.1 79 186-266 5-100 (254)
479 PLN02490 MPBQ/MSBQ methyltrans 93.7 0.43 9.4E-06 44.3 8.9 99 185-289 112-216 (340)
480 TIGR00563 rsmB ribosomal RNA s 93.7 0.69 1.5E-05 44.6 10.7 100 180-287 232-367 (426)
481 PRK07424 bifunctional sterol d 93.6 0.48 1E-05 45.2 9.3 74 186-266 177-255 (406)
482 PRK10792 bifunctional 5,10-met 93.6 0.69 1.5E-05 41.6 9.7 94 166-290 138-233 (285)
483 COG1052 LdhA Lactate dehydroge 93.5 0.69 1.5E-05 42.7 9.9 87 186-288 145-236 (324)
484 PRK08416 7-alpha-hydroxysteroi 93.5 0.67 1.5E-05 41.2 9.8 78 186-265 7-96 (260)
485 TIGR01289 LPOR light-dependent 93.5 0.49 1.1E-05 43.5 9.1 78 187-266 3-91 (314)
486 PRK12745 3-ketoacyl-(acyl-carr 93.5 0.63 1.4E-05 41.1 9.6 77 188-266 3-90 (256)
487 PRK11188 rrmJ 23S rRNA methylt 93.5 1.2 2.6E-05 38.3 10.9 97 184-287 49-164 (209)
488 PLN02986 cinnamyl-alcohol dehy 93.4 0.53 1.1E-05 43.3 9.3 39 186-225 4-43 (322)
489 PRK05565 fabG 3-ketoacyl-(acyl 93.4 0.57 1.2E-05 41.0 9.1 78 187-266 5-93 (247)
490 PF10727 Rossmann-like: Rossma 93.4 0.41 8.9E-06 37.6 7.1 86 188-287 11-102 (127)
491 PRK08063 enoyl-(acyl carrier p 93.4 0.53 1.2E-05 41.4 8.9 79 186-266 3-92 (250)
492 PRK13984 putative oxidoreducta 93.4 0.47 1E-05 48.0 9.5 77 184-266 280-378 (604)
493 PRK14179 bifunctional 5,10-met 93.4 0.65 1.4E-05 41.8 9.3 95 166-291 137-233 (284)
494 PF02719 Polysacc_synt_2: Poly 93.4 0.61 1.3E-05 42.1 9.1 75 190-266 1-87 (293)
495 PRK06171 sorbitol-6-phosphate 93.3 0.33 7.2E-06 43.3 7.5 76 186-266 8-87 (266)
496 TIGR03649 ergot_EASG ergot alk 93.3 0.49 1.1E-05 42.7 8.7 96 189-289 1-105 (285)
497 PRK02472 murD UDP-N-acetylmura 93.3 0.65 1.4E-05 45.0 10.0 71 186-266 4-78 (447)
498 PRK05855 short chain dehydroge 93.3 0.55 1.2E-05 47.0 9.8 79 186-266 314-402 (582)
499 PRK14903 16S rRNA methyltransf 93.3 1.2 2.6E-05 43.0 11.6 99 181-287 232-365 (431)
500 PLN03013 cysteine synthase 93.3 1.5 3.2E-05 42.0 11.9 56 180-236 167-226 (429)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.1e-62 Score=427.59 Aligned_cols=355 Identities=46% Similarity=0.823 Sum_probs=336.6
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~G 81 (371)
++++|++..++++||+++++.+++|++|||+||+.|+|+|++|+..++|..|. -+|+|+++|++|+++++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpG 80 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPG 80 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCceecccccccEEEEecCCccccCCC
Confidence 47899999999999999999999999999999999999999999999998876 399999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
|+|+..+..+|++|.+|+++++|+|....... .|.+ .+|+.+++-+|...++++|+++|+||.++++..++|+++..+
T Consensus 81 DhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p 159 (366)
T COG1062 81 DHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAP 159 (366)
T ss_pred CEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCCC
Confidence 99999999999999999999999999655443 8888 999999999999999999999999999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
++.++++.|...|++.++.+.+++++|++|.|.|.|++|++++|-|+..|++++|+++.+++|++.+++||+++++|.+
T Consensus 160 ~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~- 238 (366)
T COG1062 160 LEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK- 238 (366)
T ss_pred ccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCc-hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCc
Q 017460 241 NNE-PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 241 ~~~-~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
+. +..+.++++|++|+|++|||+|....++.++++..++ |+.+.+|.......++++++.+..+.++.|+.++....
T Consensus 239 -~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p 316 (366)
T COG1062 239 -EVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP 316 (366)
T ss_pred -hhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence 44 6999999999999999999999999999999999995 99999999887788889988888899999999998888
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
+.+++.++++..+|++++.+++++.++|+|+++||+.|.+++.+|-||.+
T Consensus 317 ~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi~~ 366 (366)
T COG1062 317 RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVIRF 366 (366)
T ss_pred ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEecC
Confidence 89999999999999999999999999999999999999999999887764
No 2
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=8.3e-62 Score=434.73 Aligned_cols=326 Identities=31% Similarity=0.483 Sum_probs=293.7
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCC
Q 017460 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~ 79 (371)
+++|||++++++++|+++.+++.|+|+++||+|+|+|||+|++|+++++|.++. ++|+|+++|++|++|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 478999999999999999999999999999999999999999999999999875 6999999999999999
Q ss_pred CCCEEEe-eecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 80 EGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 80 ~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
+||||.+ +++.+|++|.||++|++++|.+... .|++ .+ |+||||+++++.+++++|++
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~--~gy~-~~------------------GGyaeyv~v~~~~~~~iP~~ 139 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI--TGYT-TD------------------GGYAEYVVVPARYVVKIPEG 139 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc--ccee-ec------------------CcceeEEEEchHHeEECCCC
Confidence 9999999 8899999999999999999999666 4444 44 48999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+++++||.+.|+..|.|++| +..++++|++|+|.|+|++|.+|+|+|+++|+ +|++++++++|++.+++||++++++.
T Consensus 140 ~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~ 217 (339)
T COG1064 140 LDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217 (339)
T ss_pred CChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEc
Confidence 99999999999999999998 66999999999999999999999999999998 99999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEEEecccCCC
Q 017460 239 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGW 317 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~ 317 (371)
+ +++..+.+++. +|++||+++ +..++.+++.|+++ |+++.+|.........++.+ .+++++++.|+..++
T Consensus 218 ~--~~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~- 288 (339)
T COG1064 218 S--DSDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT- 288 (339)
T ss_pred C--CchhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC-
Confidence 6 56677776653 999999999 78999999999998 99999998852222334443 346799999998887
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCCC
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 371 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~~ 371 (371)
+.++++++++..++++++. +.+.++++++++||++|++++.. |+||++.+
T Consensus 289 --~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~~ 339 (339)
T COG1064 289 --RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGRAVIDMSS 339 (339)
T ss_pred --HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeEEEecCCC
Confidence 5689999999999997765 43699999999999999999988 99998763
No 3
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-60 Score=410.87 Aligned_cols=362 Identities=54% Similarity=0.974 Sum_probs=342.5
Q ss_pred CccceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCC
Q 017460 7 QPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVT 76 (371)
Q Consensus 7 ~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~ 76 (371)
+.++.+|||++.+++++||.++|+..++|+.+||+||++++++|++|+..++|..+. .+|+|+.+|.+|+
T Consensus 2 ~gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~ 81 (375)
T KOG0022|consen 2 AGKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVT 81 (375)
T ss_pred CCCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcc
Confidence 456899999999999999999999999999999999999999999999999998543 4999999999999
Q ss_pred CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccc--cccccCCCccceeccCcccccccCccceeeEEEeeCCceEE
Q 017460 77 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER--RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 154 (371)
Q Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~--~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 154 (371)
.+++||+|+..+...|++|.+|++++.|+|....... .++. .+|.+||..+|+..+|.++.++|+||.+++...+.+
T Consensus 82 ~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~-~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~k 160 (375)
T KOG0022|consen 82 TVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMP-YDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAK 160 (375)
T ss_pred ccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccc-cCCceeeeeCCCceEEecccccceeEEEeecceeEe
Confidence 9999999999999999999999999999999887766 4444 699999999999999999999999999999999999
Q ss_pred CCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 017460 155 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 234 (371)
Q Consensus 155 ~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 234 (371)
+++..+++.++++.|...|+|.|.++.+++++|+++.|+|-|++|+++++-|++.|++++|.++.+++|.+.+++||+.+
T Consensus 161 Id~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe 240 (375)
T KOG0022|consen 161 IDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATE 240 (375)
T ss_pred cCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEeccc
Q 017460 235 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 314 (371)
Q Consensus 235 vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 314 (371)
.+|+.+......+-+++.|++|+|+-|||+|..+.+++++.+.+.+||+-+.+|.....+.+++.++.++.++++.|+.+
T Consensus 241 ~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F 320 (375)
T KOG0022|consen 241 FINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF 320 (375)
T ss_pred ecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence 99987544568899999999999999999999999999999999999999999998888889999999899999999999
Q ss_pred CCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 315 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
++++.+.+++.+++...++++++.++|+|++||+++++||+.|.+++.+|-|+.+
T Consensus 321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR~vl~~ 375 (375)
T KOG0022|consen 321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIRCVLWM 375 (375)
T ss_pred ccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999888754
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.9e-57 Score=390.56 Aligned_cols=333 Identities=25% Similarity=0.403 Sum_probs=291.2
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCCC-------------eEEEEEeeCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWPQ-------------CCRIVESVGPGVT 76 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~-------------~~G~V~~~G~~v~ 76 (371)
.+|+|+++.+++. ++++++|.|++ .|+||+|++.++|||++|+|.++..... .+|+|+++|++|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 5689999999998 99999999998 9999999999999999999999854432 4999999999999
Q ss_pred CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECC
Q 017460 77 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 156 (371)
Q Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P 156 (371)
++++||||+..|..+|+.|+.|++|++|+|.+..+.+.+.. + |++++|++.++++++|+|
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~--~------------------G~la~y~~~~~dfc~KLP 141 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPV--D------------------GTLAEYYVHPADFCYKLP 141 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCc--C------------------CceEEEEEechHheeeCC
Confidence 99999999999999999999999999999999998655432 2 489999999999999999
Q ss_pred CCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 157 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
+++|++++|++. +++++++|. ++++++.|.+|||+|||++|+++...||++|+++|+.++..++|++.+++||++.+.
T Consensus 142 d~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~ 219 (354)
T KOG0024|consen 142 DNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTD 219 (354)
T ss_pred CCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEe
Confidence 999999999998 899999997 889999999999999999999999999999999999999999999999999999887
Q ss_pred CCCCCC--chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecc
Q 017460 237 NPNDNN--EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 313 (371)
Q Consensus 237 ~~~~~~--~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 313 (371)
+..... +.+.+.++...+. .+|+.|||+|....++.++.+++.+ |++++.|......++++.... ++++++.|++
T Consensus 220 ~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fpi~~v~-~kE~~~~g~f 297 (354)
T KOG0024|consen 220 PSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFPIIDVA-LKEVDLRGSF 297 (354)
T ss_pred eccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccChhhhh-hheeeeeeee
Confidence 665322 3344555555554 6999999999988899999999997 998888876554444443333 6799999987
Q ss_pred cCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC--eeeEEEeCCC
Q 017460 314 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK--CLRSVIHMPK 371 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~--~~kvvi~~~~ 371 (371)
-+. ..++..+++++.+|+++++++|++.|+++++.+||+.+..+. ..|++|..++
T Consensus 298 ry~---~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~~ 354 (354)
T KOG0024|consen 298 RYC---NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGPE 354 (354)
T ss_pred eec---cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCCC
Confidence 432 358999999999999999999999999999999999988777 3499998763
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.6e-54 Score=370.60 Aligned_cols=336 Identities=25% Similarity=0.390 Sum_probs=293.6
Q ss_pred CccceeeeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCC
Q 017460 7 QPQVITCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPG 74 (371)
Q Consensus 7 ~~~~~~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~ 74 (371)
+.-+.+++++++++++. ++++..++.|+++++||+|+++|||||++|++.++|.++. ++|+|+++|++
T Consensus 4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~ 83 (360)
T KOG0023|consen 4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN 83 (360)
T ss_pred ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence 34578889999999888 5777999999999999999999999999999999999875 69999999999
Q ss_pred CCCCCCCCEEEe-eecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceE
Q 017460 75 VTEFNEGEHVLT-VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 153 (371)
Q Consensus 75 v~~~~~Gd~V~~-~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~ 153 (371)
|+.|++||||-+ +...+|.+|++|..+++++|....+...|+. .+|+ ..+|+|++|+++++.+++
T Consensus 84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DGt-------------~~~ggf~~~~~v~~~~a~ 149 (360)
T KOG0023|consen 84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDGT-------------ITQGGFQEYAVVDEVFAI 149 (360)
T ss_pred cccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCCC-------------CccCccceeEEEeeeeEE
Confidence 999999999955 5578899999999999999997666556665 5552 346799999999999999
Q ss_pred ECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCC
Q 017460 154 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGV 232 (371)
Q Consensus 154 ~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~-~~~~~~~~lg~ 232 (371)
++|++++.+.||.+.|+..|+|.+| ...++.+|++|.|.|+|++|.+++|+|+++|. +|+++++++ .|++.++.||+
T Consensus 150 kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGA 227 (360)
T KOG0023|consen 150 KIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGA 227 (360)
T ss_pred ECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCc
Confidence 9999999999999999999999998 67889999999999997799999999999999 999999988 56666788999
Q ss_pred ceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEe
Q 017460 233 TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKG 311 (371)
Q Consensus 233 ~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g 311 (371)
+..++..+ ++++.+++...+++++|-|.+. ....++.+++.++.+ |++|++|.+.. ++.++.+++ +..++|.|
T Consensus 228 d~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I~G 301 (360)
T KOG0023|consen 228 DVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSIKG 301 (360)
T ss_pred ceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEEEe
Confidence 98887764 6788999999988888888776 345789999999998 99999999876 344444433 56889999
Q ss_pred cccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 312 SLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
+.+++ +.+.++++++..++.+++. | +..+++++++||++|.+++.. |.||++.
T Consensus 302 S~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 302 SIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred ecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 99988 5689999999999997765 4 788999999999999999988 9999875
No 6
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=7.5e-53 Score=397.32 Aligned_cols=370 Identities=80% Similarity=1.337 Sum_probs=301.3
Q ss_pred CcCCCCccceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC--CC-----eEEEEEeeCCC
Q 017460 2 STSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW--PQ-----CCRIVESVGPG 74 (371)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~-----~~G~V~~~G~~ 74 (371)
|.++++++...|||+++.++++.+++.++|.|+++++||+|||.+++||++|++.+.|.. +. ++|+|+++|++
T Consensus 2 ~~~~~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~~~p~i~GhE~~G~V~~vG~~ 81 (378)
T PLN02827 2 SSSISQPNVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQALFPRIFGHEASGIVESIGEG 81 (378)
T ss_pred CccccCcccceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCCCCCeeecccceEEEEEcCCC
Confidence 456778888999999999888779999999999999999999999999999999987742 21 69999999999
Q ss_pred CCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEE
Q 017460 75 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 154 (371)
Q Consensus 75 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 154 (371)
++.|++||+|++.+..+|+.|.+|+++++++|.+......|....++...+...|.-.+++...|+|+||+.++++.+++
T Consensus 82 v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~ 161 (378)
T PLN02827 82 VTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 161 (378)
T ss_pred CcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEE
Confidence 99999999999999899999999999999999875433222210000000000000000011236899999999999999
Q ss_pred CCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 017460 155 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 234 (371)
Q Consensus 155 ~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 234 (371)
+|+++++++++.+++++.++++++++.+++++|++|||+|+|++|++++|+|+++|+..|++++++++|++.++++|+++
T Consensus 162 iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~ 241 (378)
T PLN02827 162 VDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTD 241 (378)
T ss_pred CCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence 99999999999998899999998877788999999999999999999999999999966888888999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEeccc
Q 017460 235 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLF 314 (371)
Q Consensus 235 vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~ 314 (371)
++++++.+.++.+.+++++++++|+|||++|....+..+++.+++++|+++.+|.......+......+++++++.|+..
T Consensus 242 ~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~ 321 (378)
T PLN02827 242 FINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLF 321 (378)
T ss_pred EEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeec
Confidence 99886322467788888877699999999998767899999999933999999976442222222223457899999877
Q ss_pred CCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeCCC
Q 017460 315 GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 371 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~~~ 371 (371)
+.+....++.++++++.++++++.++++++|+|+++.+||+.+.+++..|+||++++
T Consensus 322 ~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~~~ 378 (378)
T PLN02827 322 GGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHMPK 378 (378)
T ss_pred CCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEecC
Confidence 655444578899999999999887789999999999999999998887899998864
No 7
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.4e-52 Score=394.89 Aligned_cols=364 Identities=51% Similarity=0.951 Sum_probs=297.8
Q ss_pred CCccceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCC
Q 017460 6 KQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPG 74 (371)
Q Consensus 6 ~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~ 74 (371)
++.++++|||+++.++++++++.++|.|+++++||+|||.++|||++|++.+.|.++ + ++|+|+++|++
T Consensus 4 ~~~~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~ 83 (381)
T PLN02740 4 TQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEG 83 (381)
T ss_pred ccccceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCC
Confidence 456788999999999987799999999999999999999999999999999988642 1 69999999999
Q ss_pred CCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccc-cCCCccceecc--CcccccccCccceeeEEEeeCCc
Q 017460 75 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVM-HSDQQTRFSIK--GKPVYHYCAVSSFSEYTVVHSGC 151 (371)
Q Consensus 75 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~-~~~g~~~~~~~--~~~~~~~~~~g~~a~~~~~~~~~ 151 (371)
++.|++||||++.+..+|+.|.+|++++++.|.+......+.. ...|...+... +...++....|+|+||++++++.
T Consensus 84 v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~ 163 (381)
T PLN02740 84 VEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSAC 163 (381)
T ss_pred CCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHH
Confidence 9999999999999999999999999999999988643111000 00000000000 00001111236899999999999
Q ss_pred eEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC
Q 017460 152 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 231 (371)
Q Consensus 152 ~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg 231 (371)
++++|++++.++++.+++++.|||+++++.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|
T Consensus 164 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~G 243 (381)
T PLN02740 164 VVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMG 243 (381)
T ss_pred eEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcC
Confidence 99999999999999999999999998878889999999999999999999999999999866999999999999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEe
Q 017460 232 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKG 311 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 311 (371)
++.++++++.+.++.+.+++++++++|+|||++|+...+..++.++++++|+++.+|.......+++....+.+++++.|
T Consensus 244 a~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g 323 (381)
T PLN02740 244 ITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITG 323 (381)
T ss_pred CcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEE
Confidence 99999876322357788888876689999999998778999999998833999999976543334444443346889998
Q ss_pred cccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 312 SLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
+..+.+....++.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~~~~~ 381 (381)
T PLN02740 324 SVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRCLLHL 381 (381)
T ss_pred EecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeEEEeC
Confidence 8776654445688999999999998888899999999999999999888777999864
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=2.1e-51 Score=386.70 Aligned_cols=356 Identities=47% Similarity=0.871 Sum_probs=289.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++...+++++++++|.|+++++||+|||.+++||++|++.+.|.++. ++|+|+++|++++.|++||
T Consensus 2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd 81 (368)
T TIGR02818 2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD 81 (368)
T ss_pred ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence 899999888888999999999999999999999999999999999886531 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCccccccc-ccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
||++.+..+|+.|.+|+.+++++|.+.... ..|+. .+|..++...|...++..+.|+|+||++++++.++++|+++++
T Consensus 82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999998999999999999999999874321 01221 1111111111111111112468999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
++++++++++.+||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|++.++++++.
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~ 240 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY 240 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence 99999999999999998778899999999999999999999999999998779999999999999999999999987632
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
+.++.+.+++++++++|++||++|+...+..+++++++++|+++.+|.......+.+....+..+..+.++..+....+.
T Consensus 241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 320 (368)
T TIGR02818 241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT 320 (368)
T ss_pred chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence 34567778888877999999999987788999999987339999999754322333333333344556676554333345
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
++.++++++.++++++.++++++|+|+|+.+||+.+.+++..|++|.+
T Consensus 321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~~v~~ 368 (368)
T TIGR02818 321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRTVIHY 368 (368)
T ss_pred HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeEEeeC
Confidence 788999999999998888899999999999999999887767999874
No 9
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.4e-51 Score=388.50 Aligned_cols=351 Identities=35% Similarity=0.643 Sum_probs=291.1
Q ss_pred eeEEEEecCC--------CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCC
Q 017460 13 CKAAVAWGAG--------QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGV 75 (371)
Q Consensus 13 ~~a~~~~~~~--------~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v 75 (371)
|||+++.++| +.++++++|.|+++++||+|||.+++||++|++++.|.++. ++|+|+++|+++
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~v 80 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPLPMALGHEAAGVVVEVGEGV 80 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCCCCCccCCccceeEEEEeCCCC
Confidence 8999999876 34899999999999999999999999999999999885431 699999999999
Q ss_pred CCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccccccCccceeeEEEeeCCceEE
Q 017460 76 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 154 (371)
Q Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 154 (371)
+.+++||||++.+...|+.|.+|+.++++.|.+..... .|.. .+|...+...+..+.+..+.|+|+||+.++++.+++
T Consensus 81 ~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~ 159 (371)
T cd08281 81 TDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVK 159 (371)
T ss_pred CcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceEE
Confidence 99999999999888899999999999999998754311 1111 111111111111112222346899999999999999
Q ss_pred CCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce
Q 017460 155 VSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE 234 (371)
Q Consensus 155 ~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~ 234 (371)
+|+++++++|+++++++.+|++++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++
T Consensus 160 lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 239 (371)
T cd08281 160 IDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239 (371)
T ss_pred CCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCce
Confidence 99999999999999999999999877888999999999999999999999999999967999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhe-eeeccEEEecc
Q 017460 235 FLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSL 313 (371)
Q Consensus 235 vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~ 313 (371)
++++. +.++.+.+++++++++|+|||++|....+..++++++++ |+++.+|.......+.++... +.+++++.+++
T Consensus 240 ~i~~~--~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 240 TVNAG--DPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred EeCCC--chhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 99886 567888888887778999999999877899999999997 999999976432233444333 34689999987
Q ss_pred cCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEE
Q 017460 314 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 367 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi 367 (371)
.+.+....++.++++++.++++++.++++++|+|+++++||+.+.+++..|.||
T Consensus 317 ~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 317 MGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred cCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 765444467889999999999998888899999999999999999998884443
No 10
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=6.6e-51 Score=383.61 Aligned_cols=357 Identities=50% Similarity=0.933 Sum_probs=291.4
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~ 80 (371)
.+|||+++.+.+++++++++|.|+++++||+|||.+++||++|++.+.|.++. ++|+|+++|+++++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 37899999888888999999999999999999999999999999998875431 69999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCccccccc-ccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE-RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~-~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
||+|++.+..+|+.|.+|++++++.|.+.... ..|.. .+|..++-.+|...++..+.|+|+||+.++++.++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999999999999999999999999864311 11221 22211111111112222234689999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
++++++++++++.+||+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999987778899999999999999999999999999996799999999999999999999999886
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCc
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
+.++++.+.+++++++++|+|||++|+...+..+++++++++|+++.+|.......+......+..+.++.++..+.+..
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 319 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKS 319 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCc
Confidence 32235788888888779999999999866889999999874499999997643223333333333455666766655544
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEe
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~ 368 (371)
+.++.++++++.++++++.++++++|+|+++++||+.+.+++..|++|+
T Consensus 320 ~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~~~ 368 (368)
T cd08300 320 RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTVVK 368 (368)
T ss_pred HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceeeeC
Confidence 5678899999999999988888999999999999999988877798874
No 11
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.1e-50 Score=382.40 Aligned_cols=358 Identities=60% Similarity=1.097 Sum_probs=294.2
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~ 80 (371)
++|||+++.+++++++++++|.|+++++||+|||.+++||++|++.++|..+ + ++|+|+++|+++++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 4899999999888899999999999999999999999999999999888643 1 59999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
||||++.+..+|++|.+|+++++++|.+..... .|....++...+...|...++..+.|+|+||+++++..++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 999999999999999999999999998754210 1111000000000011111111123689999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
++++++++++.+.++|+++++..++++|++|||+|+|++|++++|+|+++|+.+|+++++++++++.++++|++.++++.
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999989999999887888999999999999999999999999999986799999999999999999999899875
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCc
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
+.+..+.+.+++++++++|++||++|....+..++.++++++|+++.+|.......+++....+++++++.|+..+.+..
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 320 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP 320 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence 32245777788887769999999999877789999999992289999998654334444444345689999987766654
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEe
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~ 368 (371)
+.++.++++++.++++++.++++++|+|+|+++||+.+.+++..|++|+
T Consensus 321 ~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 369 (369)
T cd08301 321 KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRCILH 369 (369)
T ss_pred HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeEEeC
Confidence 5578899999999999888888999999999999999999888898874
No 12
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1e-50 Score=381.00 Aligned_cols=347 Identities=31% Similarity=0.531 Sum_probs=290.3
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCCCCCCCCC
Q 017460 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v~~~~~Gd 82 (371)
||||+++++++++++++++|.|+++++||+|||.++++|++|++.+.|..+ + ++|+|+++|++++.|++||
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 80 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDEFPFLLGHEAAGVVEAVGEGVTDVAPGD 80 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccccCCcccccceEEEEEEeCCCCcccCCCC
Confidence 699999999998899999999999999999999999999999999988532 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.+...|+.|.+|+++++++|........++. . .+|.......+.|+|+||+.++++.++++|++++++
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~-~-------~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~ 152 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMT-L-------TDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPA 152 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccc-c-------ccCcccccccccccccceEEEehhheEECCCCCChh
Confidence 99999999999999999999999985432110000 0 000000000113689999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++++++.+.++|+++.+.+++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|++.+++++ +
T Consensus 153 ~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~--~ 230 (358)
T TIGR03451 153 AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS--G 230 (358)
T ss_pred HhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCC--C
Confidence 99999999999998877778899999999999999999999999999996699999999999999999999999886 5
Q ss_pred chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEecccCCCCcC
Q 017460 243 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 243 ~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~ 320 (371)
.++.+.+++++++ ++|+|||++|+...+..++++++++ |+++.+|........+++. ..+.++.++.+++.+.....
T Consensus 231 ~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 309 (358)
T TIGR03451 231 TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPE 309 (358)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcH
Confidence 6788889988887 8999999999877889999999997 9999999764422334443 22345888888765433234
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
.++.++++++.++++++.++++++|+++|+.+||+.+++++..|++|..
T Consensus 310 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~~ 358 (358)
T TIGR03451 310 RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVEL 358 (358)
T ss_pred HHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEeC
Confidence 5788899999999999888889999999999999999888877888763
No 13
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=2.3e-50 Score=379.45 Aligned_cols=356 Identities=52% Similarity=0.954 Sum_probs=295.7
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~G 81 (371)
+.|||+++.+.+++++++++|.|.++++||+|||.++++|++|++.+.|..+. ++|+|+++|++++.+++|
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPG 80 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCCCCCCeecccceeEEEEeeCCCCccCCCC
Confidence 46899999988877999999999999999999999999999999999886431 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
|+|++.+..+|+.|.+|+++++++|.+......|.. .++...+...|+..++..+.|+|+||++++++.++++|+++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~ 159 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPL 159 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCccccccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCCCH
Confidence 999999889999999999999999998654433433 3222222222222222223468999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
++++++++++.+||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|++.++++|+++++++.+.
T Consensus 160 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~ 239 (365)
T cd08277 160 EHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS 239 (365)
T ss_pred HHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc
Confidence 99999999999999988778889999999999999999999999999998679999999999999999999999987632
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
+.++.+.+++++++++|+|||++|+...+..+++++++++|+++.+|.... ...++....+..++++.+++.+.+..+.
T Consensus 240 ~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 318 (365)
T cd08277 240 DKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFKSRS 318 (365)
T ss_pred cchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCChHH
Confidence 234677788877778999999999777789999999873499999997643 2233333333348889888877665455
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEe
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 368 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~ 368 (371)
++.++++++.++.+++.++++++|+++|+++||+.+.+++..|++|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 319 DVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred HHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 78899999999999888889999999999999999988876688873
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=1.3e-49 Score=371.13 Aligned_cols=327 Identities=28% Similarity=0.446 Sum_probs=281.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~~G 81 (371)
|||+++++++. ++++++|.|+++++||+||+.++++|++|++.+.+.+. + ++|+|+++|++|+.+++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 79999988765 99999999999999999999999999999998866421 1 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
|+|++.+...|+.|++|+.++++.|.+... ..|.. .+ |+|+||+.++++.++++|+++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~-~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~~ 139 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA-AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLSF 139 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc-ccccC-CC------------------CcceeEEEechHHeEECCCCCCH
Confidence 999999999999999999999999987543 12322 22 48999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
++|+++++++.|||+++ +..++++|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|++.+++++
T Consensus 140 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~-- 216 (339)
T cd08239 140 ADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSG-- 216 (339)
T ss_pred HHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCC--
Confidence 99999999999999998 667889999999999999999999999999994499999999999999999999999886
Q ss_pred CchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcC
Q 017460 242 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 242 ~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 320 (371)
+.+ .+.+.+++++ ++|+|||++|+...+..++++++++ |+++.+|.... ..+......+.+++++.+++... .
T Consensus 217 ~~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~ 290 (339)
T cd08239 217 QDD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---V 290 (339)
T ss_pred cch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---H
Confidence 444 6777888877 9999999999876778899999997 99999997543 23332223335688999886543 3
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
+++.++++++.++++++.++++++|+++++++||+.+.++...|+||++
T Consensus 291 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 291 PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 5789999999999998888899999999999999999887645999864
No 15
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=5.5e-48 Score=360.43 Aligned_cols=328 Identities=20% Similarity=0.318 Sum_probs=268.3
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhc-CCC---C---C------eEEEEEeeCCCCC
Q 017460 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQW---P---Q------CCRIVESVGPGVT 76 (371)
Q Consensus 10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~---~---~------~~G~V~~~G~~v~ 76 (371)
...|+|++++++++ ++++++|.| ++++||+|||.++|||++|+++++ |.+ + + ++|+|+++ +++
T Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~ 77 (343)
T PRK09880 2 QVKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSS 77 (343)
T ss_pred cccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCc
Confidence 35689999998887 999999987 589999999999999999998875 321 1 1 69999999 788
Q ss_pred CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECC
Q 017460 77 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 156 (371)
Q Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P 156 (371)
+|++||||+..+..+|+.|++|+++++++|.+.... |.. ... ....|+|+||++++++.++++|
T Consensus 78 ~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~--g~~-~~~-------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 78 GLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF--GSA-MYF-------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred cCCCCCEEEECCCCCCcCChhhcCCChhhCCCccee--ecc-ccc-------------CCCCCceeeeEEechHHeEECC
Confidence 999999999999999999999999999999875432 210 000 0012589999999999999999
Q ss_pred CCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 157 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
+++++++++.. .++++||+++ ......+|++|||+|+|++|++++|+|+++|+++|++++++++|++.++++|+++++
T Consensus 142 ~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 99999877655 4788999997 555667899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCC
Q 017460 237 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 316 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 316 (371)
+++ ++++.+ +.+. .+++|+|||++|+...+..++++++++ |+++.+|.......+++. ..+.+++++.++...
T Consensus 220 ~~~--~~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~g~~~~- 292 (343)
T PRK09880 220 NPQ--NDDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPEFPMM-TLIVKEISLKGSFRF- 292 (343)
T ss_pred cCC--cccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHHhCCcEEEEEeec-
Confidence 886 334433 2221 236999999999877789999999997 999999975432333322 223568888887642
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..++.++++++.++++++.++++++|+++++++||+.+.+++.. |++|.+
T Consensus 293 ---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ---TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ---cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 35799999999999998888889999999999999999888766 999864
No 16
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.8e-47 Score=360.10 Aligned_cols=336 Identities=22% Similarity=0.322 Sum_probs=265.2
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCC-------CCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCC
Q 017460 12 TCKAAVAWGAGQPLVVEEVEVNPPQ-------PEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGV 75 (371)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v 75 (371)
.|||++++++++ ++++++|.|+|+ +|||+|||.++|||++|+++++|..+ + ++|+|+++|++|
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~~~p~i~GhE~~G~V~~vG~~V 80 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTAPTGLVLGHEITGEVIEKGRDV 80 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCCCCCccccceeEEEEEEEcCcc
Confidence 489999998886 999999999874 68999999999999999999988642 1 699999999999
Q ss_pred CCCCCCCEEEeeecCCCCCCccccCCCCCCccccccc----ccccccCCCccceeccCcccccccCccceeeEEEeeCC-
Q 017460 76 TEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLE----RRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 150 (371)
Q Consensus 76 ~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~----~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 150 (371)
++|++||||++.+..+|+.|++|+++++++|.+.... ..|+. ..| .-.|+|+||+++++.
T Consensus 81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~-~~~--------------~~~G~~aey~~v~~~~ 145 (393)
T TIGR02819 81 EFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYV-DMG--------------GWVGGQSEYVMVPYAD 145 (393)
T ss_pred ccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccc-ccC--------------CCCCceEEEEEechhh
Confidence 9999999999999999999999999999999974321 01211 000 002589999999964
Q ss_pred -ceEECCCCCCh----hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 017460 151 -CAVKVSSIAPL----EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE 225 (371)
Q Consensus 151 -~~~~~P~~~~~----~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~ 225 (371)
.++++|++++. .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+++|++.+++++++++|++
T Consensus 146 ~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~ 224 (393)
T TIGR02819 146 FNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLA 224 (393)
T ss_pred CceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHH
Confidence 79999998753 34667777899999987 5678999999999999999999999999999955666778889999
Q ss_pred HHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCCh--------------HHHHHHHHHhccCCceEEEecCC
Q 017460 226 KAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDT--------------GMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 226 ~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~--------------~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
+++++|++. ++..+ ..++.+.+.+++++ ++|++||++|.. ..++.++++++++ |+++.+|..
T Consensus 225 ~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~~ 301 (393)
T TIGR02819 225 QARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGLY 301 (393)
T ss_pred HHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeeec
Confidence 999999974 44431 34677788888887 999999999975 3799999999998 999999986
Q ss_pred CCCCeee-----------cchhe-eeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCccee-eeecchhHHHHHHHH
Q 017460 291 KLKPEVA-----------AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLM 357 (371)
Q Consensus 291 ~~~~~~~-----------~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~a~~~~ 357 (371)
....... +.... +.++.++.+.. ......+.++++++.++++++.++++ ++|+|+++++||+.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~ 378 (393)
T TIGR02819 302 VTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEF 378 (393)
T ss_pred CCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHH
Confidence 3211111 11111 12345555421 11112346799999999999887776 789999999999999
Q ss_pred HcCCeeeEEEeCC
Q 017460 358 KEGKCLRSVIHMP 370 (371)
Q Consensus 358 ~~~~~~kvvi~~~ 370 (371)
.++...|++|.+.
T Consensus 379 ~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 379 DAGAAKKFVIDPH 391 (393)
T ss_pred hhCCceEEEEeCC
Confidence 8887679999874
No 17
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.6e-47 Score=353.42 Aligned_cols=333 Identities=28% Similarity=0.377 Sum_probs=269.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~~~G 81 (371)
|+++++..++...++++.+.|.+.+++|+|||.++|||+||++.++|..+. ++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 677777777654557777777789999999999999999999999985432 699999999 77889999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEE-CCCCCC
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK-VSSIAP 160 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~-~P~~~~ 160 (371)
|||++.+..+|++|++|+.+.+++|.+.++.+....+.+ -.|+|+||+++|.+.+++ +|++++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~----------------~~G~~aEyv~vp~~~~~~~~pd~~~ 143 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG----------------IDGGFAEYVRVPADFNLAKLPDGID 143 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccccccccccCC----------------CCCceEEEEEeccccCeecCCCCCC
Confidence 999999999999999999999999996553221111010 025899999999755555 588885
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceEeCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPN 239 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vi~~~ 239 (371)
.+.+++. .++++++++.......+++++|+|+|+|++|++++++++.+|+++|++++.+++|++++++ +|++.+++..
T Consensus 144 ~~~aal~-epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~ 222 (350)
T COG1063 144 EEAAALT-EPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPS 222 (350)
T ss_pred hhhhhhc-ChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCc
Confidence 5555555 4999997774455556666699999999999999999999999999999999999999998 6777677664
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecc-hheeeeccEEEecccCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~i~g~~~~~~ 317 (371)
.++....+.+.+++ |+|++|||+|....+..++++++++ |+++.+|....... .++ ...+.+++++.|+....
T Consensus 223 --~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~~- 297 (350)
T COG1063 223 --EDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRPS- 297 (350)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCCC-
Confidence 33677778889998 9999999999988899999999997 99999998866432 222 23336799999984311
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCe-e-eEEEeC
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-L-RSVIHM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~-~-kvvi~~ 369 (371)
...+++.+++++.+|++++.+++++.++++++++||+.+.+... . |+++.+
T Consensus 298 -~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 298 -GREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred -CcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 14589999999999999999999999999999999999987553 3 998864
No 18
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=5.9e-47 Score=355.12 Aligned_cols=340 Identities=21% Similarity=0.333 Sum_probs=275.0
Q ss_pred CCcCCCCccceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEe
Q 017460 1 MSTSIKQPQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVES 70 (371)
Q Consensus 1 ~~~~~~~~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~ 70 (371)
|+.+|...-++++.++.+.+.+..+++.+++.|+++++||+|||.+++||++|++++.|.++ + ++|+|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~ 80 (360)
T PLN02586 1 MAKSPEEEHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTK 80 (360)
T ss_pred CCCChhhhchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEE
Confidence 88888877788888888888777799999999999999999999999999999999887542 1 6999999
Q ss_pred eCCCCCCCCCCCEEEeeec-CCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeC
Q 017460 71 VGPGVTEFNEGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS 149 (371)
Q Consensus 71 ~G~~v~~~~~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~ 149 (371)
+|++|++|++||||++.+. .+|+.|.+|+++++++|.+..+...+.. .+|.. ..|+|+||+++++
T Consensus 81 vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g~~-------------~~G~~aey~~v~~ 146 (360)
T PLN02586 81 LGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIG-HDGTK-------------NYGGYSDMIVVDQ 146 (360)
T ss_pred ECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccc-cCCCc-------------CCCccceEEEEch
Confidence 9999999999999986554 5799999999999999987653211000 00100 0248999999999
Q ss_pred CceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhH-HHHH
Q 017460 150 GCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-EKAK 228 (371)
Q Consensus 150 ~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~-~~~~ 228 (371)
+.++++|+++++++++.+++.+.|+|+++.+...+++|++|||.|+|++|++++|+|+++|+ +|++++.+++++ +.++
T Consensus 147 ~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~ 225 (360)
T PLN02586 147 HFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAIN 225 (360)
T ss_pred HHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHH
Confidence 99999999999999999999999999988555667899999999999999999999999999 788877766654 5568
Q ss_pred HcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccE
Q 017460 229 AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRT 308 (371)
Q Consensus 229 ~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 308 (371)
++|++.+++++ +. +.+++.++ ++|+|||++|....+..++++++++ |+++.+|.......++.... +.++..
T Consensus 226 ~~Ga~~vi~~~--~~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~~~-~~~~~~ 297 (360)
T PLN02586 226 RLGADSFLVST--DP---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLELPIFPL-VLGRKL 297 (360)
T ss_pred hCCCcEEEcCC--CH---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCccCHHHH-HhCCeE
Confidence 99999999875 22 34555554 7999999999866789999999997 99999987543223332222 235677
Q ss_pred EEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 309 LKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 309 i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
+.++..+. ..++.++++++.++++++. + ++|+|+|+++||+.+.+++.. |++|.+
T Consensus 298 i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 298 VGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred EEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 77776543 2468999999999998753 4 689999999999999998876 999876
No 19
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=2.5e-46 Score=350.03 Aligned_cols=330 Identities=23% Similarity=0.353 Sum_probs=274.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhh-c-C-CC-CC-----eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAW-E-T-QW-PQ-----CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~-~-g-~~-~~-----~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++. +++.+.|.|++ .++||+|||.++++|++|+..+ . + .. +. ++|+|+++|+++++|++||
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd 79 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGD 79 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCCCCCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 79999998875 99999999998 5999999999999999998643 2 2 12 21 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.+..+|+.|++|+.+.+++|..... .|.. . .|+|+||+.++++.++++|++++++
T Consensus 80 ~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~s~~ 138 (347)
T PRK10309 80 AVACVPLLPCFTCPECLRGFYSLCAKYDF--IGSR-R------------------DGGNAEYIVVKRKNLFALPTDMPIE 138 (347)
T ss_pred EEEECCCcCCCCCcchhCcCcccCCCcce--eccC-C------------------CCccceeEEeehHHeEECcCCCCHH
Confidence 99999999999999999999999976432 2221 1 2489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++++. +++++++++ +...+++|++|||+|+|++|++++|+|+++|++.|+++++++++++.++++|++++++++ .
T Consensus 139 ~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~--~ 214 (347)
T PRK10309 139 DGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSR--E 214 (347)
T ss_pred Hhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCc--c
Confidence 999875 566788875 677889999999999999999999999999995588999999999999999999999876 3
Q ss_pred chHHHHHHHHhCC-Ccc-EEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecc-h-heeeeccEEEecccCCCC
Q 017460 243 EPVQQVIKRITDG-GAD-YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 243 ~~~~~~v~~~~~g-g~d-vVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~ 318 (371)
.+ .+.+.+++.+ ++| +||||+|....+..++++++++ |+++.+|.......++.. . ..+.+++++.|++.+...
T Consensus 215 ~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 292 (347)
T PRK10309 215 MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSS 292 (347)
T ss_pred cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccC
Confidence 34 4567777776 898 9999999877899999999997 999999976532222211 1 223468899988664221
Q ss_pred --cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 319 --PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 319 --~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
.+.++.++++++.++++++.++++++|+|+++++|++.+.+++.. |++++++
T Consensus 293 ~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 347 (347)
T PRK10309 293 PWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP 347 (347)
T ss_pred CcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence 135688999999999998888899999999999999999888876 9999764
No 20
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=1.9e-46 Score=344.14 Aligned_cols=305 Identities=25% Similarity=0.332 Sum_probs=254.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC------CC-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW------PQ-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~~-----~~G~V~~~G~~v~~~~ 79 (371)
|||+++++.+.+ +++.++|.|+|+++||+|||.|++||+.|+.+++|.. |. ++|+|+++|++|+.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 789999888866 8899999999999999999999999999999999862 11 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||||+... ..| . .|+|+||..++++.++++|+++
T Consensus 81 ~GdrV~~~~-~~~--------------------------~------------------~G~~AEy~~v~a~~~~~~P~~l 115 (326)
T COG0604 81 VGDRVAALG-GVG--------------------------R------------------DGGYAEYVVVPADWLVPLPDGL 115 (326)
T ss_pred CCCEEEEcc-CCC--------------------------C------------------CCcceeEEEecHHHceeCCCCC
Confidence 999999872 000 0 2589999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++++||++++.+.|||+++....++++|++|||+| +|++|.+++|+|+++|+ .++++++++++.++++++|+++++++
T Consensus 116 s~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y 194 (326)
T COG0604 116 SFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194 (326)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 99999999999999999998889999999999998 59999999999999998 77777788888889999999999999
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 316 (371)
+ +.+|.+.+++++++ ++|+|||++|+. .+..++.+++++ |+++.+|...+.....++...+ .+..++.+.....
T Consensus 195 ~--~~~~~~~v~~~t~g~gvDvv~D~vG~~-~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~ 270 (326)
T COG0604 195 R--EEDFVEQVRELTGGKGVDVVLDTVGGD-TFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGS 270 (326)
T ss_pred C--cccHHHHHHHHcCCCCceEEEECCCHH-HHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEeccee
Confidence 7 66799999999999 999999999985 788899999998 9999999876322333332222 3466666665543
Q ss_pred C--C-cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcC-Cee-eEEEeC
Q 017460 317 W--K-PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG-KCL-RSVIHM 369 (371)
Q Consensus 317 ~--~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~-~~~-kvvi~~ 369 (371)
. . ..+.+.++.+++.+|++++. ++.+|++++...+..+.... +.. |++|++
T Consensus 271 ~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 271 RDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred cchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence 3 1 12456668889999996655 67899999976666654444 666 999874
No 21
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=5.8e-45 Score=343.40 Aligned_cols=360 Identities=47% Similarity=0.845 Sum_probs=288.2
Q ss_pred ccceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCCCCC
Q 017460 8 PQVITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGVTEF 78 (371)
Q Consensus 8 ~~~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v~~~ 78 (371)
.+..+|||.++.+++++++++++|.|++.++||+||+.++++|++|++.+.|.++ + ++|+|+++|++++.+
T Consensus 3 ~~~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~ 82 (373)
T cd08299 3 GKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTPFPVILGHEAAGIVESVGEGVTTV 82 (373)
T ss_pred cccceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCCCCCccccccceEEEEEeCCCCccC
Confidence 3467799999999888899999999999999999999999999999999987542 1 699999999999999
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
++||+|++.+..+|+.|.+|++++++.|....... .|.. .++....-..|....+..+.|+|+||+++++++++++|+
T Consensus 83 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~ 161 (373)
T cd08299 83 KPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDA 161 (373)
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCC
Confidence 99999999988999999999999999998754311 1111 000000000010011111246899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
++++++++++++++.+||+++.+.+++++|++|||+|+|++|++++++|+++|+.+|+++++++++++.++++|++++++
T Consensus 162 ~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~ 241 (373)
T cd08299 162 AAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECIN 241 (373)
T ss_pred CCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence 99999999999999999999878889999999999999999999999999999867999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHh-ccCCceEEEecCCCCCCeeecchheeeeccEEEecccCC
Q 017460 238 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSC-CDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l-~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 316 (371)
..+...++...+.+++.+++|+++|++|+...+..++..+ +.+ |+++.+|.......+++....+.++.++.++..+.
T Consensus 242 ~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 320 (373)
T cd08299 242 PQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGG 320 (373)
T ss_pred ccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecC
Confidence 7532234677777777668999999999766778777765 465 99999997644334455443334578888887766
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
+..+..+.++++.+.++.+++.++++++|+++++.+||+.+.+++..|+++.+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 321 WKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 55445677788888888777777788999999999999999887766888764
No 22
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=1.5e-45 Score=345.77 Aligned_cols=324 Identities=21% Similarity=0.323 Sum_probs=256.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-------C------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-------Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-------~------~~G~V~~~G~~v~~~~ 79 (371)
|||++++..+.++++.++|.|+|+++||+|||+|++||++|++.++|.++ + ++|+|+++|++ +.|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 68999986554499999999999999999999999999999999988531 1 59999999999 9999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||||+..+...|+.|.+|+++++++|........|.... .|+|+||+.++++.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~------------------~G~~aey~~~~~~~~~~~P~~~ 141 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGL------------------HGFMREYFVDDPEYLVKVPPSL 141 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCC------------------CccceeEEEeccccEEECCCCC
Confidence 9999999988899999999999999998754322232101 2589999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhh------hcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHc
Q 017460 160 PLEKICLLSCGLSAGLGAAWN------VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAF 230 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~------~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~---~~~~~~~~~~l 230 (371)
+ +. +.+..++++++.++.. ..+.++|++|||+|+|++|++++|+|+++|+ +|+++++ +++|++.++++
T Consensus 142 ~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~ 218 (355)
T cd08230 142 A-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEEL 218 (355)
T ss_pred C-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHc
Confidence 8 44 4444466665554321 2235789999999999999999999999999 8999987 68899999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecc-----hheeee
Q 017460 231 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-----YGLFLS 305 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-----~~~~~~ 305 (371)
|++. +++. ++++.+ . . ..+++|+|||++|+...+..++++++++ |+++.+|.......++++ ...+.+
T Consensus 219 Ga~~-v~~~--~~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~k 291 (355)
T cd08230 219 GATY-VNSS--KTPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVLG 291 (355)
T ss_pred CCEE-ecCC--ccchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhhc
Confidence 9986 5654 333433 2 1 2238999999999876789999999997 999999976542233333 122356
Q ss_pred ccEEEecccCCCCcCCCHHHHHHHHHcCCC----CCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 306 GRTLKGSLFGGWKPKTDLPSLVNRYLKKEF----MVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 306 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
++++.|+.... ..++.++++++.++.+ .+.++++++|+++++.+||+.+.++. .|++|++
T Consensus 292 ~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 292 NKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE-IKVVIEW 355 (355)
T ss_pred CcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC-eEEEeeC
Confidence 88999876543 3578899999988762 35667899999999999999886543 5999864
No 23
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=3.4e-45 Score=342.45 Aligned_cols=324 Identities=25% Similarity=0.395 Sum_probs=271.2
Q ss_pred EEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhc-CCC-----CC-----eEEEEEeeCCCCCCCCCCCEE
Q 017460 16 AVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQW-----PQ-----CCRIVESVGPGVTEFNEGEHV 84 (371)
Q Consensus 16 ~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-----~~-----~~G~V~~~G~~v~~~~~Gd~V 84 (371)
+++++++++++++++|.|+++++||+|||.++++|++|++.+. |.. +. ++|+|+++|++++.+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4667777779999999999999999999999999999998763 322 11 699999999999887 99999
Q ss_pred EeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC------C
Q 017460 85 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS------I 158 (371)
Q Consensus 85 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~------~ 158 (371)
++.+..+|++|.+|+++++++|..... .|.. .+ |+|+||+.++++.++++|+ +
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~--~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~~ 139 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM--PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAAG 139 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc--cCcC-CC------------------CcccceEEechHHeEECCcccccccC
Confidence 999999999999999999999976543 2221 12 4899999999999999999 8
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++.++++.+.+++.++++++ ...++++|++|+|+|+|++|++++|+|++.|+ +|++++++++|++.++++|++.++++
T Consensus 140 ~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~ 217 (349)
T TIGR03201 140 LPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNP 217 (349)
T ss_pred CCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecC
Confidence 99999999988999999987 56789999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCC-chHHHHHHHHhCC-Ccc----EEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEec
Q 017460 239 NDNN-EPVQQVIKRITDG-GAD----YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 312 (371)
Q Consensus 239 ~~~~-~~~~~~v~~~~~g-g~d----vVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 312 (371)
.+.+ .++.+.+++++++ |+| +||||+|+...+..++++++++ |+++.+|.......+++.. .+.++.++.++
T Consensus 218 ~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~~~g~ 295 (349)
T TIGR03201 218 KDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEYRLSN-LMAFHARALGN 295 (349)
T ss_pred ccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCcccCHHH-HhhcccEEEEE
Confidence 5311 3577788888887 886 8999999877788899999997 9999999765422333221 12346788877
Q ss_pred ccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 313 LFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
+... ..++.++++++.++++++.+++ ++|+|+++++||+.+++++.. |+++++
T Consensus 296 ~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 296 WGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred ecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 6432 3578999999999999887777 479999999999999998877 888753
No 24
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.8e-44 Score=339.41 Aligned_cols=326 Identities=22% Similarity=0.335 Sum_probs=261.1
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC-----CC-----eEEEEEeeCCCCCCCCCCCEE
Q 017460 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW-----PQ-----CCRIVESVGPGVTEFNEGEHV 84 (371)
Q Consensus 15 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~-----~~G~V~~~G~~v~~~~~Gd~V 84 (371)
+++..+.++++++.+++.|+++++||+|||.+++||++|++++.|.+ |. ++|+|+++|++++.|++||||
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 44555555568888999999999999999999999999999998754 21 699999999999999999999
Q ss_pred EeeecC-CCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh
Q 017460 85 LTVFIG-ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 163 (371)
Q Consensus 85 ~~~~~~-~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~ 163 (371)
++.+.. +|+.|.+|+++++++|.+......+.. ..|. ...|+|+||+.++++.++++|+++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~-~~g~-------------~~~G~~aey~~v~~~~~~~lP~~ls~~~ 154 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRS-SDGT-------------RNQGGYSDVIVVDHRFVLSIPDGLPSDS 154 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccccccc-cCCC-------------cCCCccccEEEEchHHeEECCCCCCHHH
Confidence 876654 699999999999999998653211000 0010 0025899999999999999999999999
Q ss_pred hhhcchhhhhHHhHhhhhcC-CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceEeCCCCC
Q 017460 164 ICLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~-~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~lg~~~vi~~~~~ 241 (371)
++++++++.|+|+++..... .++|++|+|.|+|++|++++|+|+++|+ +|++++.++++ ++.++++|++++++++
T Consensus 155 aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~-- 231 (375)
T PLN02178 155 GAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTT-- 231 (375)
T ss_pred cchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCc--
Confidence 99999999999998743332 3689999999999999999999999999 88888776554 6788999999999875
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
+. +.+.+.++ ++|+|||++|....+..++++++++ |+++.+|.......++... .+.+++++.|+..+. ..
T Consensus 232 ~~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~~~~~~-~~~~~~~i~g~~~~~---~~ 302 (375)
T PLN02178 232 DS---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKPLDLPIFP-LVLGRKMVGGSQIGG---MK 302 (375)
T ss_pred CH---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCCCccCHHH-HHhCCeEEEEeCccC---HH
Confidence 21 34555554 7999999999876789999999997 9999999764322233222 224688898876544 34
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
++.++++++.+|++++. + ++|+|+++++||+.+.+++.. |++|.+
T Consensus 303 ~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 303 ETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 68899999999998754 4 679999999999999998876 999876
No 25
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=5.4e-44 Score=336.25 Aligned_cols=353 Identities=48% Similarity=0.867 Sum_probs=292.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCCCE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~Gd~ 83 (371)
+||+++.+.+.++++++.+.|.+++++|+||+.++++|++|++.+.|.++. ++|+|+++|++++.+++||+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGDK 80 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence 578999988877999999999999999999999999999999998876431 69999999999999999999
Q ss_pred EEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 84 VLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 84 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
|++.+..+|+.|.+|+++++++|....+.. .|.. .+|..++..+|....+..+.|+|++|+.++++.++++|++++++
T Consensus 81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~ 159 (365)
T cd05279 81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE 159 (365)
T ss_pred EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence 999988999999999999999998755321 2222 23444444444444443345799999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++.+.+++.+||+++.+.+++++|++|||+|+|++|++++++|+++|+..|+++++++++++.++++|++++++.++.+
T Consensus 160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~ 239 (365)
T cd05279 160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD 239 (365)
T ss_pred HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence 99999989999999987888999999999999999999999999999996688888899999999999999999876322
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhc-cCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCC-DGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~-~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
.++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|.........+....+.++.++.|++++.+....
T Consensus 240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 318 (365)
T cd05279 240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318 (365)
T ss_pred chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence 267788888775599999999987668899999999 86 9999998653222334443333457788888766655566
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEE
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 367 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi 367 (371)
.+..+++++.++.+++.++++++|+++++.+||+.+.+++..|+++
T Consensus 319 ~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred HHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 7889999999999887666789999999999999998877667776
No 26
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=3.6e-44 Score=332.33 Aligned_cols=311 Identities=22% Similarity=0.329 Sum_probs=259.2
Q ss_pred EEEEecCCC----CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCC
Q 017460 15 AAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 15 a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~ 80 (371)
|+.+.+++. .++++++|.|+|+++||+|||.+++||++|++.+.|.++ + ++|+|+++|+++++|++
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV 80 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence 345555553 489999999999999999999999999999999988643 1 69999999999999999
Q ss_pred CCEEEeeec-CCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 81 GEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 81 Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
||+|++.+. .+|+.|++|+++++++|.+... .|.. .+ |+|+||+.++++.++++|+++
T Consensus 81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~--~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRY--TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CCEEEEcCccCcCCCChHHhCcCcccCCCccc--CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 999987664 4699999999999999987553 2322 22 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
++++++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|++.++++|+++++++.
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999998 56889999999999999999999999999999 899999999999999999999998753
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-CeeecchheeeeccEEEecccCCCC
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~ 318 (371)
+.. .+++|+++++.+....+..++++++++ |+++.+|..... ..++.. ..+.+++++.++....
T Consensus 218 --~~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~-~~~~~~~~i~g~~~~~-- 282 (329)
T TIGR02822 218 --DTP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTDTPPLNYQ-RHLFYERQIRSVTSNT-- 282 (329)
T ss_pred --ccC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCccCCCCCHH-HHhhCCcEEEEeecCC--
Confidence 111 126899999888777899999999997 999999975332 122221 1224678888775432
Q ss_pred cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 319 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
+.++.++++++.+++++ +++++|+|+++++||+.+.+++.. |+||
T Consensus 283 -~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 283 -RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred -HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 34678889999999875 357999999999999999999888 8886
No 27
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.3e-43 Score=333.58 Aligned_cols=337 Identities=27% Similarity=0.404 Sum_probs=278.6
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC--C--------eEEEEEeeCCCCCC------
Q 017460 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP--Q--------CCRIVESVGPGVTE------ 77 (371)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~--------~~G~V~~~G~~v~~------ 77 (371)
||+++.++++.+++.+.+.|.++++||+|||.++++|++|+..+.|.++ . ++|+|+++|++++.
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 7899999887799999999999999999999999999999998888654 1 69999999999986
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCC-CccceeccCcccccccCccceeeEEEeeCC-ceEEC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSD-QQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-CAVKV 155 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~-g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-~~~~~ 155 (371)
|++||+|++.+..+|+.|.+|+.+.+++|...... |.. .+ +. ....|+|+||+.++++ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~--~~~-~~~~~------------~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY--GHE-ASCDD------------PHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc--ccc-ccccC------------CCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999876542 211 00 00 0012589999999986 89999
Q ss_pred CCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 156 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
|++++.+++++++++++|||+++.+....+++++|||+|+|++|++++++|+++|+++|+++++++++.+.++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999999988999999998666656699999999999999999999999999789999999999999999999988
Q ss_pred eCCCCCC-chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEEEec
Q 017460 236 LNPNDNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGS 312 (371)
Q Consensus 236 i~~~~~~-~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~ 312 (371)
++++... ..+...+++++++ ++|++||++|+...+..++++++++ |+++.+|........++... .+.++.++.++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV 305 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence 8776211 1233577888887 9999999998766789999999997 99999987643223333332 23468888887
Q ss_pred ccCCCCcCCCHHHHHHHHHcC--CCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 313 LFGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
.... .+++.++++++.++ .+.+.++++++|+++++++||+.+.++...|++|.+
T Consensus 306 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 361 (361)
T cd08231 306 HNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTALKVVIDP 361 (361)
T ss_pred ccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCceEEEeCC
Confidence 6543 35788899999888 566777788999999999999999887766999864
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=1.1e-43 Score=332.75 Aligned_cols=324 Identities=30% Similarity=0.479 Sum_probs=275.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC----------------CCC-----eEEEEEee
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ----------------WPQ-----CCRIVESV 71 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~----------------~~~-----~~G~V~~~ 71 (371)
|||++++++++ ++++++|.|++.++||+||+.++++|++|++.+.+. .+. ++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 79999998775 999999999999999999999999999998765421 111 69999999
Q ss_pred CCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCc
Q 017460 72 GPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC 151 (371)
Q Consensus 72 G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~ 151 (371)
|++++.+++||+|++.+..+|+.|.+|++++.++|..... .|+. . ..|+|++|+.++.+.
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-----------------~~g~~a~~~~~~~~~ 139 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF--IGLG-G-----------------GGGGFAEYVVVPAYH 139 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce--eccC-C-----------------CCCceeeEEEechHH
Confidence 9999999999999999999999999999999999975432 2211 0 024899999999999
Q ss_pred eEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC
Q 017460 152 AVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 231 (371)
Q Consensus 152 ~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg 231 (371)
++++|++++.++++.+ .++.+||+++ ..+++++|++|||+|+|.+|++++|+|+.+|+++|+++++++++.+.++++|
T Consensus 140 ~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~g 217 (351)
T cd08233 140 VHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELG 217 (351)
T ss_pred eEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC
Confidence 9999999999999877 5788999998 7888999999999999999999999999999978999999999999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEE
Q 017460 232 VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTL 309 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i 309 (371)
++.+++++ +.++.+.+++++++ ++|+|||++|....++.++++++++ |+++.+|..... ..++.. .+.+++++
T Consensus 218 a~~~i~~~--~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i 292 (351)
T cd08233 218 ATIVLDPT--EVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKTL 292 (351)
T ss_pred CCEEECCC--ccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcEE
Confidence 99999987 56788889888887 8999999999766889999999997 999999976532 223322 23468899
Q ss_pred EecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhH-HHHHHHHHcCCe--eeEEE
Q 017460 310 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDI-NQAFNLMKEGKC--LRSVI 367 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~a~~~~~~~~~--~kvvi 367 (371)
.++.... ..++.++++++.++++++.++++++|+++|+ ++|++.+.+++. .|++|
T Consensus 293 ~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 293 TGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred EEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 8876432 4679999999999999887778899999996 789999888775 38887
No 29
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.1e-43 Score=330.99 Aligned_cols=332 Identities=21% Similarity=0.304 Sum_probs=269.4
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC-----CC-----eEEEEEeeCCCCCCCC
Q 017460 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW-----PQ-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~-----~~G~V~~~G~~v~~~~ 79 (371)
...++|+++..+++++++++++.|+++++||+|||.+++||++|++.+.|.+ +. ++|+|+++|+++++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 7 EKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred CceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCccccc
Confidence 3458999999999999999999999999999999999999999999888754 21 6999999999999999
Q ss_pred CCCEEEeeec-CCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 80 EGEHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 80 ~Gd~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
+||+|++.+. .+|+.|.+|+++++++|....+...+.. ..|. ...|+|+||++++.+.++++|++
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~-~~g~-------------~~~G~~aey~~v~~~~~~~iP~~ 152 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY-TDGK-------------PTQGGFASAMVVDQKFVVKIPEG 152 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc-cCCc-------------cCCCccccEEEEchHHeEECCCC
Confidence 9999986554 4799999999999999987643210000 0010 01258999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEeC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi~ 237 (371)
+++++++.+++++.+||+++......++|++|+|+|+|++|++++|+|+++|+ ++++++++++++..+ +++|++.+++
T Consensus 153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~ 231 (357)
T PLN02514 153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV 231 (357)
T ss_pred CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence 99999999999999999998655556899999999999999999999999999 788888888777655 6799988876
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 238 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
+. +. +.+.+.+. ++|++||++|....+..++++++++ |+++.+|.......++.. ..+.+++++.|++.+.
T Consensus 232 ~~--~~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~- 302 (357)
T PLN02514 232 SS--DA---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTPLQFVTP-MLMLGRKVITGSFIGS- 302 (357)
T ss_pred CC--Ch---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCCCcccHH-HHhhCCcEEEEEecCC-
Confidence 64 21 34455443 7999999999766789999999997 999999976432222222 2235688999887654
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
..++.++++++.+++++ +++ ++|+++++.+||+.+.+++.. |++|.++
T Consensus 303 --~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~~ 351 (357)
T PLN02514 303 --MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDVRYRFVVDVA 351 (357)
T ss_pred --HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCCceeEEEEcc
Confidence 34688999999999864 445 689999999999999998887 9999875
No 30
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=1.1e-42 Score=327.28 Aligned_cols=352 Identities=34% Similarity=0.593 Sum_probs=280.5
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~G 81 (371)
++|||+++.++++++++.+.+.|++.++||+||+.++++|++|+++..|.++. ++|+|+++|+++..+++|
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~G 80 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPG 80 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCCCCCcccccceeEEEEEeCCCcccCCCC
Confidence 58999999998777999999999999999999999999999999998875431 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccc-cccccCCCccceeccCcccc--cccCccceeeEEEeeCCceEECCCC
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER-RGVMHSDQQTRFSIKGKPVY--HYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~-~g~~~~~g~~~~~~~~~~~~--~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
|+|++.+. .|+.|.+|+.+..++|.+..... .|.. .+|..-....+.+.+ +....|+|++|++++++.++++|++
T Consensus 81 d~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 81 DHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999764 89999999999999998654321 1111 111000000000000 0112368999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++.++++.+++++.+|++++.+...++++++|||+|+|++|++++++|+++|++++++++++++|.+.++++|++.++++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~ 238 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecC
Confidence 99999999999999999998788889999999999989999999999999999779999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCC
Q 017460 239 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGW 317 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~ 317 (371)
+ ..++.+.+.++++.++|+++|++|+...+..++++++++ |+++.+|.........++...+ .++.++.++.....
T Consensus 239 ~--~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (365)
T cd08278 239 K--EEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDS 315 (365)
T ss_pred C--CcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCc
Confidence 6 557778888888339999999999766889999999997 9999998753222223333332 45788877654332
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEe
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~ 368 (371)
...+.+.++++++.++++.+.+++ +.|+++++.+|++.+.++...|++|+
T Consensus 316 ~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 316 VPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred ChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 223456788889999988554444 68999999999999988877788874
No 31
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=7.8e-43 Score=291.88 Aligned_cols=305 Identities=22% Similarity=0.259 Sum_probs=260.5
Q ss_pred ceeeeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCC
Q 017460 10 VITCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTE 77 (371)
Q Consensus 10 ~~~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~ 77 (371)
|...+.+++++.|.. ++++..|.|+|.++|++||-.|+|+|..|+.+.+|.+.+ .+|+|+++|++|++
T Consensus 6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtd 85 (336)
T KOG1197|consen 6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTD 85 (336)
T ss_pred CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCccc
Confidence 445588888888765 999999999999999999999999999999999998832 49999999999999
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
+++||||+... + .|.|+|+..+|...++++|+
T Consensus 86 rkvGDrVayl~------------------------------~------------------~g~yaee~~vP~~kv~~vpe 117 (336)
T KOG1197|consen 86 RKVGDRVAYLN------------------------------P------------------FGAYAEEVTVPSVKVFKVPE 117 (336)
T ss_pred cccccEEEEec------------------------------c------------------chhhheeccccceeeccCCc
Confidence 99999998762 2 24899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
.+++.+||++...+.||+.-+++..++++|++||++. ||++|++++|++++.|+ .+|++.++.+|++.+++.|+++.|
T Consensus 118 ~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I 196 (336)
T KOG1197|consen 118 AITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPI 196 (336)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCccee
Confidence 9999999999999999999998999999999999996 69999999999999999 999999999999999999999999
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-CeeecchheeeeccEEE-ecc
Q 017460 237 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLK-GSL 313 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~-g~~ 313 (371)
+++ .+++.+++.++|++ |+|+++|.+|. +++...+.+|++. |.++.+|..++. .++++..+. -+.+++. ++.
T Consensus 197 ~y~--~eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~ls-~k~l~lvrpsl 271 (336)
T KOG1197|consen 197 DYS--TEDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQLS-PKALQLVRPSL 271 (336)
T ss_pred ecc--chhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhcC-hhhhhhccHhh
Confidence 998 78999999999999 99999999998 4899999999997 999999987663 234433222 2344443 334
Q ss_pred cCCCCcCCC----HHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 314 FGGWKPKTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 314 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
++....+.. ..+++.++.++.++++ |.|+|||+++.+|...+++..+. |+++.+.
T Consensus 272 ~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrktvGkvlLlp~ 331 (336)
T KOG1197|consen 272 LGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKTVGKVLLLPG 331 (336)
T ss_pred hcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhccceEEEeCC
Confidence 333322222 2345666678887776 88999999999999999999988 9988764
No 32
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=9.9e-42 Score=320.81 Aligned_cols=351 Identities=38% Similarity=0.680 Sum_probs=281.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCCCE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~Gd~ 83 (371)
|||+++.+++.++++.++|.|++++++|+||+.++++|++|+..+.|.++. ++|+|+++|++++.+++||+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDH 80 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCCCCCccccccceEEEEEeCCCccccCCCCE
Confidence 799999998878999999999999999999999999999999988775431 69999999999999999999
Q ss_pred EEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh
Q 017460 84 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 163 (371)
Q Consensus 84 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~ 163 (371)
|+..+..+|++|.+|++++.+.|......-.|.. .++..++..-|...+.....|+|++|+.++++.++++|++++.++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 81 VVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEECCCCCCCCChhhcCCCcccCccccccccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 9999999999999999999999986532101100 000000000011111112246899999999999999999999999
Q ss_pred hhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 164 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
++.+++++.+||.++.+..++.++++|||+|+|.+|++++++|+..|+.+|+++++++++.+.++++|++++++++ ..
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~--~~ 237 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS--ED 237 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC--Cc
Confidence 9999999999999988888999999999998899999999999999995599999999999999999999899886 55
Q ss_pred hHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCCCcCC
Q 017460 244 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 244 ~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 321 (371)
++...+++++.+ ++|++||++++...+..++++++++ |+++.+|.........+....+ .++.++.++.+.......
T Consensus 238 ~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (363)
T cd08279 238 DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRR 316 (363)
T ss_pred cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHH
Confidence 788888888766 8999999999766789999999997 9999998654222223333222 246666666544333345
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEE
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 367 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi 367 (371)
.+.++++++.++.+++.++++++|+++++.+|++.+.+++..|.||
T Consensus 317 ~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 317 DIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred HHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 7888999999999876655678999999999999998887665554
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.4e-41 Score=316.91 Aligned_cols=332 Identities=25% Similarity=0.333 Sum_probs=273.1
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++.+++. +++.+.+.|.+.++||+|||.++++|++|++.+.|.++. ++|+|+++|++++++++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 79999999886 899999999999999999999999999999888765431 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCCC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 160 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~~ 160 (371)
+|++.+..+|+.|..|..++++.|.+... |.. . + ....|+|+||+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~---~~~-~-~-------------~~~~g~~~~y~~v~~~~~~~~~lP~~~~ 141 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG---GWK-F-S-------------NFKDGVFAEYFHVNDADANLAPLPDGLT 141 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC---Ccc-c-c-------------CCCCcceeEEEEcchhhCceEECCCCCC
Confidence 99998888999999999999999986421 100 0 0 0012589999999974 8999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
.++++.++..+.+|++++ +.++++++++|||+|+|++|++++|+|+++|++.|+++++++++.+.++++|++.+++++
T Consensus 142 ~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~- 219 (351)
T cd08285 142 DEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK- 219 (351)
T ss_pred HHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC-
Confidence 999999988999999996 778899999999999899999999999999996799999999999999999999999886
Q ss_pred CCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee---eeccEEEecccCC
Q 017460 241 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF---LSGRTLKGSLFGG 316 (371)
Q Consensus 241 ~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~---~~~~~i~g~~~~~ 316 (371)
..++.+.+..++.+ ++|++||++|+...+..++++++++ |+++.+|.........++...+ .+..++.+.....
T Consensus 220 -~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 297 (351)
T cd08285 220 -NGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPG 297 (351)
T ss_pred -CCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecCC
Confidence 56788888888777 8999999999877889999999997 9999998765432333332111 2344555433211
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcc-eeeeecchhHHHHHHHHHcCCe--eeEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEF-ITHNLLFEDINQAFNLMKEGKC--LRSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~--~kvvi~~ 369 (371)
..+++.++++++.++++++..+ ++++|+++++.+|++.+.+++. .|++|.+
T Consensus 298 --~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 298 --GRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --ccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 2357899999999999887443 4456999999999999988863 4999864
No 34
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=5.1e-41 Score=314.60 Aligned_cols=326 Identities=27% Similarity=0.378 Sum_probs=272.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC-------------CC------eEEEEEeeCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW-------------PQ------CCRIVESVGP 73 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-------------~~------~~G~V~~~G~ 73 (371)
|||++++++++ +++++.+.|++.+++|+||+.++++|+.|+..+.|.+ .+ ++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 78999998876 9999999999999999999999999999998887742 11 5999999999
Q ss_pred CCC--CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC-
Q 017460 74 GVT--EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 150 (371)
Q Consensus 74 ~v~--~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 150 (371)
+++ .|++||+|++.+..+|+.|++|+++++++|....+ .|+. .. ..|+|++|+.++++
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~~----------------~~g~~~~~~~~~~~~ 140 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL--YGFQ-NN----------------VNGGMAEYMRFPKEA 140 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc--eeec-cC----------------CCCcceeeEEccccc
Confidence 999 89999999999999999999999999999975432 3331 00 12589999999988
Q ss_pred ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 017460 151 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 230 (371)
Q Consensus 151 ~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l 230 (371)
.++++|+++++++++.+ .+++++|+++ +.++++++++|||.|+|.+|++++++|+++|+..++++++++++.+.++++
T Consensus 141 ~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 218 (350)
T cd08256 141 IVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKF 218 (350)
T ss_pred ceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHc
Confidence 68899999999999988 7999999997 788999999999987899999999999999986788899999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEE
Q 017460 231 GVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 309 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 309 (371)
|++.+++++ ..++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.......+++......++.++
T Consensus 219 g~~~v~~~~--~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i 295 (350)
T cd08256 219 GADVVLNPP--EVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELDV 295 (350)
T ss_pred CCcEEecCC--CcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccEE
Confidence 998888876 56788888888887 8999999999756788999999997 9999998654322222222212346777
Q ss_pred EecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 310 KGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.++.... ..+.++++++.++.+++.++++++|+++++.+|++.+++++.. |+++
T Consensus 296 ~~~~~~~----~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 296 LGSHLGP----YCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEeccCc----hhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 7765432 3688899999999987765567999999999999999888766 7764
No 35
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=6.1e-41 Score=312.77 Aligned_cols=325 Identities=21% Similarity=0.347 Sum_probs=266.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++. ++++++|.|+++++||+||+.++++|++|++.+.|..+ + ++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 78999998875 99999999999999999999999999999998887653 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.+...|+.|.+|+++++++|.+... .++. . .|+|+||+.++.+.++++|++++.+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~ip~~~~~~ 138 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV--LGVH-R------------------DGGFSEYAVVPAKNAHRIPDAIADQ 138 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce--EEEc-c------------------CCcceeeEEechHHeEECcCCCCHH
Confidence 99999999999999999999999976543 1211 1 2489999999999999999999998
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~-~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
+++.+ .++.+++.+ .+..++++|++|+|+|+|++|++++|+|+. +|+..+++++++++|++.++++|++.+++++
T Consensus 139 ~a~~~-~~~~~a~~~-~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~-- 214 (339)
T PRK10083 139 YAVMV-EPFTIAANV-TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNA-- 214 (339)
T ss_pred HHhhh-chHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCc--
Confidence 87744 578888864 477889999999999999999999999996 6996688899999999999999999999886
Q ss_pred CchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcC
Q 017460 242 NEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 242 ~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~ 320 (371)
+.++.+.+.. .+ ++|++||++|+...+..++++++++ |+++.+|.......+.. ...+.+++++.+... ..
T Consensus 215 ~~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~----~~ 286 (339)
T PRK10083 215 QEPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEPSEIVQ-QGITGKELSIFSSRL----NA 286 (339)
T ss_pred cccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCceecH-HHHhhcceEEEEEec----Ch
Confidence 4456665533 23 5789999999766899999999997 99999987543222211 111234666666543 13
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcC-Cee-eEEEeCCC
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEG-KCL-RSVIHMPK 371 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~-~~~-kvvi~~~~ 371 (371)
..+.++++++.++++++.++++++|+++++++|++.+.++ ... |+++++++
T Consensus 287 ~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 287 NKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 5788999999999988765567999999999999998754 344 99998764
No 36
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=6.1e-41 Score=319.80 Aligned_cols=320 Identities=17% Similarity=0.216 Sum_probs=255.2
Q ss_pred eeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhh-cCCC-----------CC-----eEEEEEeeCC
Q 017460 11 ITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQW-----------PQ-----CCRIVESVGP 73 (371)
Q Consensus 11 ~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~-----------~~-----~~G~V~~~G~ 73 (371)
|+|||+++.+++. ++++++|.|+++++||+|||.++|||++|++.+ .|.. |. ++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5789999999886 999999999999999999999999999999876 4531 11 5999999999
Q ss_pred CCC-CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--
Q 017460 74 GVT-EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG-- 150 (371)
Q Consensus 74 ~v~-~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~-- 150 (371)
+|+ .|++||||++.+...|+.|..|. + .|+. .+ |+|+||++++++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~------------~g~~-~~------------------G~~aey~~v~~~~~ 127 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCP-G------------YSYT-YP------------------GGLATYHIIPNEVM 127 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCC-C------------cccc-CC------------------CcceEEEEecHHhc
Confidence 998 59999999999988899888772 1 1111 22 489999999987
Q ss_pred --ceEECCCCCChhhhhhcchhhh---hHHhHh--------hhhcCCCCCCEEEEEc-cChHHHHHHHHHHHcC--CCEE
Q 017460 151 --CAVKVSSIAPLEKICLLSCGLS---AGLGAA--------WNVADISKGSTVVIFG-LGTVGLSVAQGAKARG--ASRI 214 (371)
Q Consensus 151 --~~~~~P~~~~~~~aa~~~~~~~---~a~~~l--------~~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G--~~~v 214 (371)
.++++|+++++++++++. +++ +++.++ .+.+++++|++|+|+| +|++|++++|+|+++| +.+|
T Consensus 128 ~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 128 EQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred cCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 689999999999998663 222 233332 2457789999999997 5999999999999975 4579
Q ss_pred EEEcCChhhHHHHHHc--------CCc-eEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceE
Q 017460 215 IGVDTNPEKCEKAKAF--------GVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLA 284 (371)
Q Consensus 215 i~~~~~~~~~~~~~~l--------g~~-~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~ 284 (371)
++++++++|++.++++ |++ .++++++ ..++.+.+++++++ ++|++||++|....+..++++++++ |++
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~~ 284 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GCL 284 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-CeE
Confidence 9999999999999997 776 5677642 25688888888888 9999999998777899999999997 888
Q ss_pred EEecCCC-CCCeeecchhe-eeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCe
Q 017460 285 VTLGVPK-LKPEVAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC 362 (371)
Q Consensus 285 v~~g~~~-~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~ 362 (371)
+.++... .....+++... +.+++++.|+..+. ..++.++++++.++++++.++++++|+|+++++||+.+. ++.
T Consensus 285 v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~ 360 (410)
T cd08238 285 NFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIP 360 (410)
T ss_pred EEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccC
Confidence 7764422 11112333222 35688999876543 357899999999999999888999999999999999998 555
Q ss_pred e-eEEEeCC
Q 017460 363 L-RSVIHMP 370 (371)
Q Consensus 363 ~-kvvi~~~ 370 (371)
. |++|.++
T Consensus 361 ~gKvvl~~~ 369 (410)
T cd08238 361 GGKKLIYTQ 369 (410)
T ss_pred CceEEEECC
Confidence 5 9999874
No 37
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=1.1e-40 Score=310.22 Aligned_cols=320 Identities=23% Similarity=0.371 Sum_probs=269.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++.++++++.|.|+++++||+||+.++++|++|+..+.|..+. ++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 799999998667999999999999999999999999999999988775421 6999999999999999999
Q ss_pred EEEeee-cCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 83 HVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 83 ~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
+|++.+ ...|+.|.+|..++++.|..... .|.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~--~~~~-~------------------~g~~a~~~~v~~~~~~~lp~~~~~ 139 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV--TGVT-R------------------DGGYAEYMLAPAEALARIPDDLDA 139 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc--cCcc-c------------------CCcceeEEEEchhheEeCCCCCCH
Confidence 998855 46799999999999999987653 2221 1 148999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
++++.+++++.+|++++ ...+++++++|||+|+|++|++++++|+++|+ +|+++++++++++.++++|++++++++
T Consensus 140 ~~aa~l~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~-- 215 (333)
T cd08296 140 AEAAPLLCAGVTTFNAL-RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTS-- 215 (333)
T ss_pred HHhhhhhhhhHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCC--
Confidence 99999999999999988 44589999999999999999999999999999 899999999999999999999999886
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEEEecccCCCCcC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~ 320 (371)
..++.+.++++ +++|++||++|....+..++++++++ |+++.+|.... ..+++.. .+.+++++.++..+. .
T Consensus 216 ~~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~ 287 (333)
T cd08296 216 KEDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---A 287 (333)
T ss_pred CccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---H
Confidence 45576667665 37999999997666889999999997 99999987653 2233322 224688998876433 2
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.++..+++++.+++++. ++ ++|+++++.+||+.+.+++.+ |+||+
T Consensus 288 ~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 288 LDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 46778888888777543 34 689999999999999998887 98874
No 38
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=2e-40 Score=310.19 Aligned_cols=331 Identities=29% Similarity=0.407 Sum_probs=274.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~G 81 (371)
|||+++.+++. +++.+.|.|.+ .+++|+||+.++++|++|+..+.|.++. ++|+|+++|++++.+++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 68999998876 89999999999 9999999999999999999998886542 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCC
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 159 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~ 159 (371)
|+|++.+..+|+.|.+|.++...+|....+..++.. ...|+|++|++++++ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~g~~~~~~~v~~~~~~~~~lP~~~ 141 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGN------------------RIDGGQAEYVRVPYADMNLAKIPDGL 141 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCccccccc------------------CCCCeeeEEEEecchhCeEEECCCCC
Confidence 999999999999999999999999987553221100 012589999999987 999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
+.++++.+++++.+||+++ ...+++++++|||.|+|.+|++++|+|+.+|+.+++++++++++.+.++++|++.+++++
T Consensus 142 ~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~ 220 (347)
T cd05278 142 PDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220 (347)
T ss_pred CHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCC
Confidence 9999999999999999997 778899999999988899999999999999965788888888999999999999999887
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 318 (371)
+.++.+.+++++++ ++|++||++++...+..++++++++ |+++.+|..............+.+++++.+.....
T Consensus 221 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 221 --NGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred --cchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc--
Confidence 56688888888876 9999999998755789999999997 99999986543221112222224566766654322
Q ss_pred cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCe-e-eEEEeC
Q 017460 319 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC-L-RSVIHM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~-~-kvvi~~ 369 (371)
...+.++++++.++.+++.+.+...|+++++.++++.+..++. . |+++++
T Consensus 296 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 296 -RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred -hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 3578889999999988765545688999999999999987776 5 888763
No 39
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.8e-41 Score=314.72 Aligned_cols=310 Identities=17% Similarity=0.179 Sum_probs=240.5
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC--------C------eEEEEEeeCCCCCCCC
Q 017460 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP--------Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~------~~G~V~~~G~~v~~~~ 79 (371)
||++++++++ ++++++|.|. +++||+|||.++|||++|+++++|.+. + ++|+|+++|.. .|+
T Consensus 4 ~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~ 79 (341)
T cd08237 4 QVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYK 79 (341)
T ss_pred cceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--ccC
Confidence 7888888886 9999999995 999999999999999999999988531 2 69999998764 799
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||||++.+...|+ |..| +..++|.+..+. |.. .+ |+|+||+.++++.++++|+++
T Consensus 80 vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~--g~~-~~------------------G~~aey~~v~~~~~~~vP~~l 135 (341)
T cd08237 80 VGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR--SSG-YD------------------GFMQDYVFLPPDRLVKLPDNV 135 (341)
T ss_pred CCCEEEECCCCCch-hccc--chhccCCCccee--Eec-CC------------------CceEEEEEEchHHeEECCCCC
Confidence 99999998887787 4455 456778765431 211 22 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhh--hcCCCCCCEEEEEccChHHHHHHHHHHH-cCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 160 PLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGLGTVGLSVAQGAKA-RGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~--~~~~~~~~~VlI~Gag~~G~~ai~la~~-~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
++++|+++. +++++++++.. .+.+++|++|||+|+|++|++++|+++. .|..+|++++++++|++.+++++++..+
T Consensus 136 ~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~ 214 (341)
T cd08237 136 DPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLI 214 (341)
T ss_pred ChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeeh
Confidence 999888665 88899998743 3457889999999999999999999986 6655899999999999999887664322
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEEcCCC---hHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEec
Q 017460 237 NPNDNNEPVQQVIKRITDG-GADYSFECIGD---TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGS 312 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~---~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~ 312 (371)
+ + +... ++|+|||++|+ ...+..++++++++ |+++.+|.......++.. ..+.+++++.++
T Consensus 215 ~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~k~~~i~g~ 279 (341)
T cd08237 215 D------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYPVPINTR-MVLEKGLTLVGS 279 (341)
T ss_pred h------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCCcccCHH-HHhhCceEEEEe
Confidence 1 1 1223 79999999994 45789999999997 999999975432222221 123568899887
Q ss_pred ccCCCCcCCCHHHHHHHHHcC---CCCCCcceeeeecch---hHHHHHHHHHcCCeeeEEEeCC
Q 017460 313 LFGGWKPKTDLPSLVNRYLKK---EFMVDEFITHNLLFE---DINQAFNLMKEGKCLRSVIHMP 370 (371)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~~---~~~~a~~~~~~~~~~kvvi~~~ 370 (371)
.... ..++.++++++.++ +.++.++|+++|+++ ++.++|+.+.++...|+||++.
T Consensus 280 ~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~~~gKvvi~~~ 340 (341)
T cd08237 280 SRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTNSWGKTVMEWE 340 (341)
T ss_pred cccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhcCcceEEEEee
Confidence 6432 34688999999998 335778889999985 6677777665553339999764
No 40
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=3.9e-40 Score=312.08 Aligned_cols=337 Identities=28% Similarity=0.388 Sum_probs=274.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~G 81 (371)
|||+++.++++ +++.++|.|.+ ++++|+||+.++++|++|+..+.|.++ + ++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 79999988755 99999999998 499999999999999999999988764 1 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccc----------cccccCCCccceeccCcccccccCccceeeEEEeeCC-
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLER----------RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG- 150 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----------~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~- 150 (371)
|+|++.+...|++|++|+.+..++|.+..... .|+.+.. .+ . ....|+|++|++++.+
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------~-~~~~g~~~~~~~v~~~~ 148 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYS---HL-------T-GGYAGGQAEYVRVPFAD 148 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccc---cc-------c-CCCCCeeEEEEEccccc
Confidence 99999998899999999999999998755321 1111000 00 0 0012589999999987
Q ss_pred -ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 017460 151 -CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 229 (371)
Q Consensus 151 -~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 229 (371)
.++++|+++++++++.++..+++||+++ +..++.+|++|||+|+|.+|++++++|+++|+.+|+++++++++.+.+++
T Consensus 149 ~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~ 227 (386)
T cd08283 149 VGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARS 227 (386)
T ss_pred CeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 8999999999999999998999999998 78899999999999999999999999999998569999999999999999
Q ss_pred cCCceEeCCCCCCc-hHHHHHHHHhCC-CccEEEEcCCCh---------------------HHHHHHHHHhccCCceEEE
Q 017460 230 FGVTEFLNPNDNNE-PVQQVIKRITDG-GADYSFECIGDT---------------------GMITTALQSCCDGWGLAVT 286 (371)
Q Consensus 230 lg~~~vi~~~~~~~-~~~~~v~~~~~g-g~dvVid~~g~~---------------------~~l~~~~~~l~~~~G~~v~ 286 (371)
++...++++. .. ++.+.++.++++ ++|+|||++|+. ..+..++++++++ |+++.
T Consensus 228 ~~~~~vi~~~--~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~ 304 (386)
T cd08283 228 HLGAETINFE--EVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSI 304 (386)
T ss_pred cCCcEEEcCC--cchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEE
Confidence 8444677765 34 488888888887 899999999752 3678899999997 99999
Q ss_pred ecCCCCCCeeecch-heeeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC-ee-
Q 017460 287 LGVPKLKPEVAAHY-GLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-CL- 363 (371)
Q Consensus 287 ~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~-~~- 363 (371)
+|..... ...++. ..+.++.++.+..... .+.+..+++++.++++.+.++++++|+++++.+||+.+.++. ..
T Consensus 305 ~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~ 380 (386)
T cd08283 305 IGVYGGT-VNKFPIGAAMNKGLTLRMGQTHV---QRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCI 380 (386)
T ss_pred EcCCCCC-cCccCHHHHHhCCcEEEeccCCc---hHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeE
Confidence 9876442 222222 2234577877764321 356888999999999887666678999999999999988776 34
Q ss_pred eEEEeC
Q 017460 364 RSVIHM 369 (371)
Q Consensus 364 kvvi~~ 369 (371)
|++|++
T Consensus 381 k~~~~~ 386 (386)
T cd08283 381 KVVLKP 386 (386)
T ss_pred EEEecC
Confidence 999863
No 41
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=2.6e-40 Score=308.63 Aligned_cols=323 Identities=28% Similarity=0.428 Sum_probs=274.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC--------C-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP--------Q-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~-----~~G~V~~~G~~v~~~~ 79 (371)
|||+++.++++++++.+.+.|++++++|+||+.++++|++|+....|.++ . ++|+|+++|++++.++
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 78999998877799999999999999999999999999999998877543 1 5999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.+...|+.|..|+.+..++|.+.... |+. .+ |+|++|+.++++.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~v~~~~~~~~P~~l 139 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP--GIG-TD------------------GGFAEYLLVPSRRLVKLPRGL 139 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc--Ccc-CC------------------CcceeeEEecHHHeEECCCCC
Confidence 999999999899999999999999999987752 332 22 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhh-cCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~-~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
+.++++.+++.+.|||+++.+. ..+.++++|||+|+|++|++++++|+.+| . +|+++++++++.+.++++|++++++
T Consensus 140 s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 140 DPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 9999999999999999998655 46888999999999889999999999999 6 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCC
Q 017460 238 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG 316 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 316 (371)
++ .. +.+.+++++++ ++|+++|++|+...+..++++++++ |+++.+|.... ..++... .+.+++++.++....
T Consensus 219 ~~--~~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 292 (340)
T cd05284 219 AS--DD-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH-GRLPTSD-LVPTEISVIGSLWGT 292 (340)
T ss_pred CC--cc-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-CccCHHH-hhhcceEEEEEeccc
Confidence 86 44 88888888877 8999999999766789999999997 99999986542 2222111 134678887765432
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...+..+++++.++.+.+ . .+.|+++++++|++.+++++.. |+++.+
T Consensus 293 ---~~~~~~~~~~l~~g~l~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 ---RAELVEVVALAESGKVKV--E-ITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred ---HHHHHHHHHHHHhCCCCc--c-eEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 357888999999998764 2 3689999999999999988877 888754
No 42
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.5e-40 Score=308.23 Aligned_cols=326 Identities=25% Similarity=0.356 Sum_probs=275.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----------------C-----eEEEEEe
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----------------Q-----CCRIVES 70 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------------~-----~~G~V~~ 70 (371)
|||+++..++.++++.+.|.|+++++||+||+.++++|++|++.+.|.++ . ++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 79999988888899999999999999999999999999999998876532 1 6999999
Q ss_pred eCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC
Q 017460 71 VGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 150 (371)
Q Consensus 71 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 150 (371)
+|++++.+++||+|++.++..|+.|..|.++.+++|..... .|.. . .|+|++|+.++.+
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~ 139 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA--LGIF-Q------------------DGGYAEYVIVPHS 139 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc--eeee-c------------------cCcceeeEEecHH
Confidence 99999999999999999999999999999999999977543 1211 1 2489999999999
Q ss_pred ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 017460 151 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 230 (371)
Q Consensus 151 ~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l 230 (371)
.++++|++++..+++.+.+.+.+||+++.....+.++++|||+|+|++|++++|+|++.|+++|+++++++++.+.++++
T Consensus 140 ~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~ 219 (350)
T cd08240 140 RYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219 (350)
T ss_pred HeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHh
Confidence 99999999999999999999999999986666667899999999899999999999999997789999999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEE
Q 017460 231 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 310 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 310 (371)
|++.+++.+ +..+.+.+.++.++++|++||++|....+..++++++++ |+++.+|........+..... .++.++.
T Consensus 220 g~~~~~~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~-~~~~~i~ 295 (350)
T cd08240 220 GADVVVNGS--DPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLLP-LRALTIQ 295 (350)
T ss_pred CCcEEecCC--CccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHHh-hcCcEEE
Confidence 998888876 556777788776668999999999766889999999997 999999876543233333322 3677887
Q ss_pred ecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 311 GSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 311 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
++.... .+++..+++++.++.++.. ....|+++++.+||+.+.+++.. |+++.
T Consensus 296 ~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 296 GSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred EcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 766543 2468889999999987654 35789999999999999888877 88875
No 43
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=9.3e-40 Score=305.53 Aligned_cols=327 Identities=25% Similarity=0.397 Sum_probs=275.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~G 81 (371)
|||+++.+++. +++.+.|.|++ .++||+||++++++|++|+..+.|.++ + ++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 78999998886 99999999996 899999999999999999999988654 1 599999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCC
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIA 159 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~ 159 (371)
|+|++.+...|+.|++|..+..+.|....+. .|.. . .|+|++|+.++.+ .++++|+++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~------------------~g~~~~~~~v~~~~~~~~~lp~~~ 139 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI-LGNL-I------------------DGTQAEYVRIPHADNSLYKLPEGV 139 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc-cccc-c------------------CCeeeeEEEcccccCceEECCCCC
Confidence 9999999999999999999999999876542 1211 1 2489999999987 899999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
+..+++.+++.+++||+++....++.++++|||+|+|.+|++++|+|+++|+.+|++++++++|.+.++++|++.+++++
T Consensus 140 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (345)
T cd08286 140 DEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSA 219 (345)
T ss_pred CHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccc
Confidence 99999999989999999876778899999999999999999999999999944899998999999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhe-eeeccEEEecccCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGW 317 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~ 317 (371)
..++...+.+++.+ ++|++||++++...+..+++.++++ |+++.+|..... ..+.... +.+++++.+....
T Consensus 220 --~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-- 292 (345)
T cd08286 220 --KGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-- 292 (345)
T ss_pred --cccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc--
Confidence 45677788888777 8999999998766788999999997 999999865432 2233332 3467888764322
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC---eeeEEEeC
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK---CLRSVIHM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~---~~kvvi~~ 369 (371)
...+.++++++.++.+++.++++++|+++++.++++.+.+.. ..|++|++
T Consensus 293 --~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 --TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred --hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 235788889999998877666679999999999999998763 44999864
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=1.1e-39 Score=305.00 Aligned_cols=328 Identities=26% Similarity=0.391 Sum_probs=277.6
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++.++++.+.|.|.+.+++|+||+.++++|++|+..+.|..+ + ++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887899999999999999999999999999999998887654 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCCC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 160 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~~ 160 (371)
+|+..++..|++|++|..+..++|..... .|+. .+ |+|++|+.++++ .++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~~ 139 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ--PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDVD 139 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc--cccC-CC------------------CcceeEEEcccccCceEECCCCCC
Confidence 99997888999999999999999998542 2221 12 489999999975 9999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
.++++.++.++.+|++++.+.+++.++++|+|+|+|.+|++++++|++.|+ +|+++++++++++.++++|++.+++++
T Consensus 140 ~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~- 217 (345)
T cd08260 140 FVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS- 217 (345)
T ss_pred HHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc-
Confidence 999999998999999998777889999999999999999999999999999 899999999999999999999999886
Q ss_pred CC-chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe-eecchhee-eeccEEEecccCCC
Q 017460 241 NN-EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLF-LSGRTLKGSLFGGW 317 (371)
Q Consensus 241 ~~-~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~-~~~~~i~g~~~~~~ 317 (371)
. .++.+.+.++..+++|++||++|+...+...+++++++ |+++.+|....... ..++...+ .++.++.+.....
T Consensus 218 -~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (345)
T cd08260 218 -EVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP- 294 (345)
T ss_pred -cchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC-
Confidence 4 57777788776668999999998756788999999997 99999987543221 22222222 4577777765422
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
...+..+++++.++++.+.+++++.++++++.+|++.+..++.. |+|++
T Consensus 295 --~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 295 --AHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred --HHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 35788899999999887665567899999999999999988777 77764
No 45
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=1.3e-39 Score=307.02 Aligned_cols=349 Identities=34% Similarity=0.522 Sum_probs=278.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCC---CCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTE---FNE 80 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~---~~~ 80 (371)
|||+++.+++.++++.+.|.|.++++||+||+.++++|++|+..+.|.++. ++|+|+.+|++++. +++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~ 80 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYGLSV 80 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCCCCCcccccccceEEEEeCCCCCCCCcCCC
Confidence 789999998777999999999999999999999999999999988875531 69999999999988 999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCccccccccc--ccccCCCccc-eeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR--GVMHSDQQTR-FSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~--g~~~~~g~~~-~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
||+|++.+..+|+.|.+|..+.+++|.......+ |.. ..|... +...+...+ ....|+|++|+.++.+.++++|+
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~P~ 158 (367)
T cd08263 81 GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVY-MYSMGGLAEYAVVPATALAPLPE 158 (367)
T ss_pred CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCccc-cccCCcceeEEEechhhEEECCC
Confidence 9999998889999999999999999997541100 000 000000 000000000 01135899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
+++..+++.+++++.+||+++...+.+.++++|||+|+|.+|++++++|+++|+.+++++++++++.+.++++|++.+++
T Consensus 159 ~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~ 238 (367)
T cd08263 159 SLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVN 238 (367)
T ss_pred CCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEec
Confidence 99999999999999999999877778899999999988999999999999999944999999999999999999999998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccC
Q 017460 238 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 315 (371)
++ ..++.+++++.+++ ++|+|||++++...+..++++++++ |+++.++.........+....+ .++.++.++...
T Consensus 239 ~~--~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 239 AA--KEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred CC--cccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 87 56788888888776 9999999999854788999999997 9999998654322222332222 357777764322
Q ss_pred CCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 316 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
. .++.+.++++++.++.+.+.+++++.|+++++.++++.+++++.. |+||+
T Consensus 316 ~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 R--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred C--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1 134688889999999987765567899999999999999988877 88874
No 46
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=1.5e-39 Score=309.28 Aligned_cols=332 Identities=19% Similarity=0.230 Sum_probs=270.8
Q ss_pred ccceeeeEEEEe--cCCC---CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC--------------CC----C-
Q 017460 8 PQVITCKAAVAW--GAGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------------WP----Q- 63 (371)
Q Consensus 8 ~~~~~~~a~~~~--~~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------------~~----~- 63 (371)
.-|.+|+|+++. +++. .+++.++|.|.++++||+||+.+++||++|++.+.|. .+ .
T Consensus 8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~ 87 (393)
T cd08246 8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS 87 (393)
T ss_pred cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence 457889999985 3332 3788999999999999999999999999998877653 11 1
Q ss_pred -eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCcccee
Q 017460 64 -CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 142 (371)
Q Consensus 64 -~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 142 (371)
++|+|+++|++++.+++||+|++.+...|+.|..|..+.+++|....+ .|+. . ..|+|+
T Consensus 88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~-----------------~~g~~a 147 (393)
T cd08246 88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI--WGYE-T-----------------NYGSFA 147 (393)
T ss_pred ceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc--cccc-C-----------------CCCcce
Confidence 699999999999999999999999999999999999999999976443 3332 1 125899
Q ss_pred eEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhh--cCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC
Q 017460 143 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV--ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 219 (371)
Q Consensus 143 ~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~--~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~ 219 (371)
+|+++++..++++|+++++++++.+++++.+||+++... ++++++++|||+|+ |++|++++++|+++|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999997544 67899999999996 9999999999999999 8888889
Q ss_pred ChhhHHHHHHcCCceEeCCCCC--------------------CchHHHHHHHHhCC--CccEEEEcCCChHHHHHHHHHh
Q 017460 220 NPEKCEKAKAFGVTEFLNPNDN--------------------NEPVQQVIKRITDG--GADYSFECIGDTGMITTALQSC 277 (371)
Q Consensus 220 ~~~~~~~~~~lg~~~vi~~~~~--------------------~~~~~~~v~~~~~g--g~dvVid~~g~~~~l~~~~~~l 277 (371)
++++++.++++|+++++++++. ...+.+.+.+++++ ++|++||++|+ ..+..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 9999999999999998886421 11356778888876 79999999997 5789999999
Q ss_pred ccCCceEEEecCCCCC-CeeecchheeeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHH
Q 017460 278 CDGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNL 356 (371)
Q Consensus 278 ~~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~ 356 (371)
+++ |+++.+|..... ..++.... +.++.++.+++... .+.+.++++++.++.+.+ .++++|+++++++|++.
T Consensus 306 ~~~-G~~v~~g~~~~~~~~~~~~~l-~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~~~~~a~~~ 378 (393)
T cd08246 306 DRG-GMVVICAGTTGYNHTYDNRYL-WMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLDETPDAHQL 378 (393)
T ss_pred ccC-CEEEEEcccCCCCCCCcHHHH-hhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHHHHHHHHHH
Confidence 997 999999865432 12222222 24577787776543 246888999999998764 35789999999999999
Q ss_pred HHcC-Cee-eEEEe
Q 017460 357 MKEG-KCL-RSVIH 368 (371)
Q Consensus 357 ~~~~-~~~-kvvi~ 368 (371)
+.++ ... |+++-
T Consensus 379 ~~~~~~~~gkvvv~ 392 (393)
T cd08246 379 MHRNQHHVGNMAVL 392 (393)
T ss_pred HHhCccccceEEEe
Confidence 9888 666 87763
No 47
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=5.5e-40 Score=301.74 Aligned_cols=293 Identities=21% Similarity=0.268 Sum_probs=230.3
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCC-cchhhhhcCCCC-------C------eEEEEEeeCCCCCC
Q 017460 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLC-RSDITAWETQWP-------Q------CCRIVESVGPGVTE 77 (371)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~-------~------~~G~V~~~G~~v~~ 77 (371)
+|||+++.+++. +++.+.|.|+|+++||+|||.+++|| ++|++.+.|.++ + ++|+|+++|+++ .
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 589999988775 99999999999999999999999996 799988887531 1 699999999998 6
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
|++||||+.. |..|.+|.. | . .|+|+||+.++++.++++|+
T Consensus 79 ~~vGdrV~~~----~~~c~~~~~--------------~---~------------------~G~~aey~~v~~~~~~~ip~ 119 (308)
T TIGR01202 79 FRPGDRVFVP----GSNCYEDVR--------------G---L------------------FGGASKRLVTPASRVCRLDP 119 (308)
T ss_pred CCCCCEEEEe----Ccccccccc--------------c---c------------------CCcccceEEcCHHHceeCCC
Confidence 9999999874 223322210 0 1 14899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
+++.+. ++++ .+.+||+++. .. ..++++|||+|+|++|++++|+|+++|++.|++++.+++|++.++++ .++|
T Consensus 120 ~~~~~~-a~~~-~~~~a~~~~~-~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~ 192 (308)
T TIGR01202 120 ALGPQG-ALLA-LAATARHAVA-GA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLD 192 (308)
T ss_pred CCCHHH-Hhhh-HHHHHHHHHH-hc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccC
Confidence 999864 5554 5789999874 33 34688999999999999999999999996677787888887776654 3455
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 238 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
+. . . .+.++|+||||+|+...++.++++++++ |+++.+|.......+++... +.+++++.++....
T Consensus 193 ~~--~-~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~i~~~~~~~- 258 (308)
T TIGR01202 193 PE--K-D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFVPA-FMKEARLRIAAEWQ- 258 (308)
T ss_pred hh--h-c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccchh-hhcceEEEEecccc-
Confidence 43 1 1 1238999999999876789999999997 99999997644223333222 24678888765432
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
..++.++++++.++++++.++++++|+|+++++||+.+.++... |++|+
T Consensus 259 --~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 259 --PGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred --hhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 35799999999999999888899999999999999988766554 99874
No 48
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=4.8e-39 Score=300.55 Aligned_cols=330 Identities=27% Similarity=0.408 Sum_probs=269.0
Q ss_pred eeEEEEecCCCCeEEEEeecCCCC-CCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v~~~~~Gd 82 (371)
|+|+++..+. .+++++++.|++. ++||+||+.++++|+.|+..+.|.++ + ++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGD 79 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCCCCCcccccceEEEEEeeCCCccccCCCC
Confidence 6899998775 5999999999985 99999999999999999998887653 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCCC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 160 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~~ 160 (371)
+|++.+..+|+.|.+|.++..++|.+.... |..+.. ...|+|++|+.++++ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------------~~~g~~~~~~~v~~~~~~~~~~p~~l~ 142 (344)
T cd08284 80 RVVSPFTIACGECFYCRRGQSGRCAKGGLF--GYAGSP---------------NLDGAQAEYVRVPFADGTLLKLPDGLS 142 (344)
T ss_pred EEEEcccCCCCCChHHhCcCcccCCCCccc--cccccC---------------CCCCceeEEEEcccccCceEECCCCCC
Confidence 999999899999999999999999865431 110000 013589999999865 9999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
+++++.+++.+.+||+++ ...++.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.+.++++|+. .++.+
T Consensus 143 ~~~a~~l~~~~~ta~~~~-~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~- 219 (344)
T cd08284 143 DEAALLLGDILPTGYFGA-KRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFE- 219 (344)
T ss_pred HHHhhhhcCchHHHHhhh-HhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecC-
Confidence 999999999999999998 457889999999999899999999999999975799998889999999999985 45554
Q ss_pred CCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCc
Q 017460 241 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 241 ~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
..++...+.+++++ ++|++||++++...+..++++++++ |+++.+|..............+.++.++..... ..
T Consensus 220 -~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 294 (344)
T cd08284 220 -DAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC---PV 294 (344)
T ss_pred -CcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCCCccccHHHHhhcCcEEEEecC---Cc
Confidence 45688888888877 9999999999766889999999997 999999876532111111222345677654321 12
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEe
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 368 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~ 368 (371)
...+..+++++.++.+.+.++++++|+++++.++++.+.++...|+|++
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 295 RSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred chhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 4678899999999988765556789999999999998887655687774
No 49
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.6e-39 Score=301.02 Aligned_cols=330 Identities=25% Similarity=0.386 Sum_probs=262.8
Q ss_pred ceeeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC--------CCC-----eEEEEEeeCCCCC
Q 017460 10 VITCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------WPQ-----CCRIVESVGPGVT 76 (371)
Q Consensus 10 ~~~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------~~~-----~~G~V~~~G~~v~ 76 (371)
..+|+++++..+.. +++.+.+.|.+.++||+||+.++++|++|++.+.|. .+. ++|+|+++|++++
T Consensus 15 ~~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~ 93 (364)
T PLN02702 15 EEENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93 (364)
T ss_pred ccccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCC
Confidence 45566666666654 899999999999999999999999999999888652 121 6999999999999
Q ss_pred CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECC
Q 017460 77 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 156 (371)
Q Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P 156 (371)
.|++||+|++.+..+|+.|..|.++..+.|.+..+. +.. . ..|+|++|++++...++++|
T Consensus 94 ~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~--~~~-~-----------------~~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 94 HLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF--ATP-P-----------------VHGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc--CCC-C-----------------CCCcccceEEcchHHeEECC
Confidence 999999999999999999999999999999863321 100 0 12489999999999999999
Q ss_pred CCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 157 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
++++++++++.. ++.++++++ +..++.++++|||+|+|++|++++++|++.|+..+++++++++|.+.++++|++.++
T Consensus 154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999988632 555688876 778899999999999999999999999999996688888899999999999998877
Q ss_pred CCCCCCchHHHHHHHH---hCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecc
Q 017460 237 NPNDNNEPVQQVIKRI---TDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSL 313 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~---~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~ 313 (371)
++.....++.+.+.++ +++++|+|||++|+...+..++++++++ |+++.+|.......+.. .....+++++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~ 309 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNEMTVPL-TPAAAREVDVVGVF 309 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCcccH-HHHHhCccEEEEec
Confidence 6532235666666655 2338999999999767899999999997 99999986533211111 12234578888765
Q ss_pred cCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecc--hhHHHHHHHHHcCCee-eEEEe
Q 017460 314 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLF--EDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.. ...+..+++++.++.+.+.++++++|++ +++.+|++.+.+++.. |++|.
T Consensus 310 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 310 RY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred cC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 32 2467888999999988766667788665 7999999999887766 98885
No 50
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=1.3e-38 Score=296.87 Aligned_cols=324 Identities=30% Similarity=0.475 Sum_probs=269.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++. +++.+++.|.++++||+|+|.++++|+.|+..+.|..+ + ++|+|+++|++++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 78999988875 99999999999999999999999999999998877543 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|+..++.+|+.|..|+.++++.|..... .++. . .|+|++|+.++++ ++++|++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~v~v~~~-~~~~p~~~~~~ 137 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV--LGVH-R------------------DGGFAEYIVVPAD-ALLVPEGLSLD 137 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe--eeec-C------------------CCcceeEEEechh-eEECCCCCCHH
Confidence 99998888999999999999999954322 1111 1 2489999999999 99999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++++ ..+.++++++ +..++.++++|||+|+|.+|++++|+|+.+|+ +|+++++++++.+.++++|++++++++ .
T Consensus 138 ~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~--~ 212 (337)
T cd08261 138 QAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG--D 212 (337)
T ss_pred Hhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCc--c
Confidence 99877 4778888887 78899999999999889999999999999999 899999999999999999999999887 5
Q ss_pred chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 243 EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 243 ~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
.++.+.+.+++++ ++|++||++|+...+..++++++++ |+++.+|.......++.. ....++.++.+... ...+
T Consensus 213 ~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~ 287 (337)
T cd08261 213 EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPVTFPDP-EFHKKELTILGSRN---ATRE 287 (337)
T ss_pred cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCCCccCHH-HHHhCCCEEEEecc---CChh
Confidence 5788888888877 8999999998766789999999997 999999865432222221 11124666666532 2235
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC-ee-eEEEeC
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-CL-RSVIHM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~-~~-kvvi~~ 369 (371)
.+..+++++.++.+++.+.+..+|+++++.++++.+.+++ .. |+|+++
T Consensus 288 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 288 DFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred hHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 7888999999999876434568999999999999998873 55 988864
No 51
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=1.4e-38 Score=297.09 Aligned_cols=327 Identities=24% Similarity=0.343 Sum_probs=265.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC--------CCC-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------WPQ-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------~~~-----~~G~V~~~G~~v~~~~ 79 (371)
||+++++++++.+++.+.|.|.+.++||+||++++++|++|+.++.+. .+. ++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 689999998878999999999999999999999999999999865431 111 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.+..+|+.|+.|..+++++|.+... .|.. . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~iP~~l 139 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG--VGVN-R------------------PGAFAEYLVIPAFNVWKIPDDI 139 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce--eeec-C------------------CCcceeeEEechHHeEECcCCC
Confidence 99999999999999999999999999976432 2221 1 2589999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
++++++.+ .++.++++++.. ...+|++|+|+|+|++|++++++|+++|+++|+++++++++.+.++++|++.+++++
T Consensus 140 ~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~ 216 (341)
T PRK05396 140 PDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVA 216 (341)
T ss_pred CHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCc
Confidence 99888865 466777666532 346899999998899999999999999996688888899999999999999999886
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 318 (371)
..++.+.+++++++ ++|+||||+|+...+..++++++++ |+++.+|.......+++ ...++++.++.++.....
T Consensus 217 --~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~- 291 (341)
T PRK05396 217 --KEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM- 291 (341)
T ss_pred --cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc-
Confidence 56788888888877 9999999999877889999999997 99999986543233332 233345777777542221
Q ss_pred cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeCC
Q 017460 319 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 370 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~~ 370 (371)
...+..+++++.++ +.+.+.+.++|+++++.+|++.+.++...|++++++
T Consensus 292 -~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 292 -FETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred -cchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 23456778888888 445555678999999999999998877339998764
No 52
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-38 Score=297.85 Aligned_cols=326 Identities=29% Similarity=0.436 Sum_probs=268.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++.++++ +++.+.|.|.+ +++||+||+.++++|++|++.+.|.++ + ++|+|+++|+++..+++||
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGD 79 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCCCCCcccccceEEEEEEeCCCCCccCCCC
Confidence 78999988776 99999999996 899999999999999999988887654 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCCCCC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSSIAP 160 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~~~~ 160 (371)
+|++.+..+|+.|.+|..+..+.|.+..+. |.. .+ |+|++|+.++.+ .++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~v~~~~~~~~~lP~~l~ 138 (345)
T cd08287 80 FVIAPFAISDGTCPFCRAGFTTSCVHGGFW--GAF-VD------------------GGQGEYVRVPLADGTLVKVPGSPS 138 (345)
T ss_pred EEEeccccCCCCChhhhCcCcccCCCCCcc--cCC-CC------------------CceEEEEEcchhhCceEECCCCCC
Confidence 999866778999999999999999875431 111 12 489999999975 9999999998
Q ss_pred hhhhh-----hcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 161 LEKIC-----LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 161 ~~~aa-----~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
++.+. ++...+.+|++++ +.+++++|++|+|.|+|.+|++++++|++.|++.++++++++++.+.++++|++.+
T Consensus 139 ~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v 217 (345)
T cd08287 139 DDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDI 217 (345)
T ss_pred hhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceE
Confidence 72221 2224688899987 57889999999999899999999999999999668899888889999999999999
Q ss_pred eCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEecc
Q 017460 236 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSL 313 (371)
Q Consensus 236 i~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~ 313 (371)
++++ ...+.+.+.+++++ ++|+++|++|+...+..++++++++ |+++.+|..... ..++. ..+.++.++.+..
T Consensus 218 ~~~~--~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 292 (345)
T cd08287 218 VAER--GEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG--VELDVRELFFRNVGLAGGP 292 (345)
T ss_pred ecCC--cccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCCC--CccCHHHHHhcceEEEEec
Confidence 9887 56788888888877 9999999998777899999999997 999999865432 22232 2345688887643
Q ss_pred cCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 314 FGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
... ...+.++++++.++.+++.++++++|+++++.+|++.+.+....|++|++
T Consensus 293 ~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~~~~~ 345 (345)
T cd08287 293 APV---RRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAIKVLLRP 345 (345)
T ss_pred CCc---HHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCceEEEeCC
Confidence 221 34688899999999987765567899999999999998887766999863
No 53
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=1.4e-38 Score=302.73 Aligned_cols=333 Identities=20% Similarity=0.264 Sum_probs=270.5
Q ss_pred cceeeeEEEEec--CCC---CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC---------------C--C---
Q 017460 9 QVITCKAAVAWG--AGQ---PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW---------------P--Q--- 63 (371)
Q Consensus 9 ~~~~~~a~~~~~--~~~---~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---------------~--~--- 63 (371)
.+.+|||+++.. ++. .+++.+.|.|.+.+++|+||++++++|++|++...+.. + .
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 467899999954 453 38999999999999999999999999998876654421 1 1
Q ss_pred -eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCcccee
Q 017460 64 -CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFS 142 (371)
Q Consensus 64 -~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a 142 (371)
++|+|+++|++++.+++||+|++.....|++|++|+.+++++|....+ .|.. . ..|+|+
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~-----------------~~g~~a 143 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI--WGYE-T-----------------NFGSFA 143 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc--cccc-C-----------------CCccce
Confidence 699999999999999999999999999999999999999999975432 2211 0 125899
Q ss_pred eEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhh--hcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC
Q 017460 143 EYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN--VADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 219 (371)
Q Consensus 143 ~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~--~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~ 219 (371)
||+.++++.++++|+++++++++.+.+.+.+||+++.. ..++.++++|||+|+ |.+|++++++|+++|+ +++++++
T Consensus 144 e~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~~ 222 (398)
T TIGR01751 144 EFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVVS 222 (398)
T ss_pred EEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEcC
Confidence 99999999999999999999999999999999999754 477899999999996 9999999999999999 8888889
Q ss_pred ChhhHHHHHHcCCceEeCCCCCC--------------------chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhc
Q 017460 220 NPEKCEKAKAFGVTEFLNPNDNN--------------------EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCC 278 (371)
Q Consensus 220 ~~~~~~~~~~lg~~~vi~~~~~~--------------------~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~ 278 (371)
++++++.++++|++.++|++.++ ..+.+.+.+++++ ++|++|||+|. ..+..++++++
T Consensus 223 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l~ 301 (398)
T TIGR01751 223 SPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVCR 301 (398)
T ss_pred CHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhhc
Confidence 99999999999999999875210 1355677788877 89999999996 57889999999
Q ss_pred cCCceEEEecCCCCC-CeeecchheeeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHH
Q 017460 279 DGWGLAVTLGVPKLK-PEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLM 357 (371)
Q Consensus 279 ~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~ 357 (371)
++ |+++.+|..... ..++.... +.++.++.++.+..+ .++.++++++.++++... ++++|++++++++|+.+
T Consensus 302 ~~-G~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~~~--~~~~~~l~~~~~a~~~~ 374 (398)
T TIGR01751 302 RG-GMVVICGGTTGYNHDYDNRYL-WMRQKRIQGSHFANL---REAWEANRLVAKGRIDPT--LSKVYPLEEIGQAHQDV 374 (398)
T ss_pred cC-CEEEEEccccCCCCCcCHHHH-hhcccEEEccccCcH---HHHHHHHHHHHCCCcccc--eeeEEcHHHHHHHHHHH
Confidence 97 999999876432 12222221 235667777655432 357788999999887643 67899999999999999
Q ss_pred HcCCee-eEEEeCC
Q 017460 358 KEGKCL-RSVIHMP 370 (371)
Q Consensus 358 ~~~~~~-kvvi~~~ 370 (371)
.+++.. |+++.+.
T Consensus 375 ~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 375 HRNHHQGNVAVLVL 388 (398)
T ss_pred HcCCCCceEEEEeC
Confidence 888877 9888753
No 54
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=8.8e-39 Score=296.33 Aligned_cols=299 Identities=18% Similarity=0.228 Sum_probs=242.9
Q ss_pred eeEEEEecCCC-----CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCC
Q 017460 13 CKAAVAWGAGQ-----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVT 76 (371)
Q Consensus 13 ~~a~~~~~~~~-----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~ 76 (371)
|||+++++++. .+++.++|.|.++++||+||+.++++|++|++.+.|.++ . ++|+|+++|++++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 78999998875 378889999999999999999999999999998887542 1 6999999999999
Q ss_pred C-CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEEC
Q 017460 77 E-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 155 (371)
Q Consensus 77 ~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~ 155 (371)
+ |++||+|++.+ .. .|+|+||+.++++.++++
T Consensus 81 ~~~~vGd~V~~~~------------------------------~~-----------------~g~~a~~~~v~~~~~~~i 113 (324)
T cd08291 81 AQSLIGKRVAFLA------------------------------GS-----------------YGTYAEYAVADAQQCLPL 113 (324)
T ss_pred ccCCCCCEEEecC------------------------------CC-----------------CCcchheeeecHHHeEEC
Confidence 6 99999999752 00 138999999999999999
Q ss_pred CCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEE--ccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 017460 156 SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIF--GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 233 (371)
Q Consensus 156 P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~--Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 233 (371)
|+++++++++.+++.+.|||.++ +.... +++.++|+ |+|++|++++|+|+++|+ +|+++++++++++.++++|++
T Consensus 114 P~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~ 190 (324)
T cd08291 114 PDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAE 190 (324)
T ss_pred CCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCc
Confidence 99999999998888888997544 55555 56666665 469999999999999999 899999999999999999999
Q ss_pred eEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEe
Q 017460 234 EFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKG 311 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g 311 (371)
++++++ ..++.+.+++++++ ++|++||++|+. .....+.+++++ |+++.+|.........++. ..+.+++++.+
T Consensus 191 ~~i~~~--~~~~~~~v~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~ 266 (324)
T cd08291 191 YVLNSS--DPDFLEDLKELIAKLNATIFFDAVGGG-LTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIEG 266 (324)
T ss_pred EEEECC--CccHHHHHHHHhCCCCCcEEEECCCcH-HHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEEE
Confidence 999886 56788899998887 999999999985 567789999997 9999998654322111212 22356888888
Q ss_pred cccCCCCc---CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 312 SLFGGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 312 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
+....+.. .+.+.++++++. ++ ++++++++|+|+++.+||+.+.+++.. |++|.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 267 FWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred EEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence 87654422 134666777776 55 455688999999999999999888776 98873
No 55
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-38 Score=295.86 Aligned_cols=319 Identities=25% Similarity=0.382 Sum_probs=266.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||++++++++++++++.|.|++.++|++||++++++|++|+....|.++. ++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 789999999988999999999999999999999999999999888775431 6999999999998899999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.++.+|+.|.+|..++++.|..... .|.. .. |+|++|+.++.+.++++|++++..
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~~~ 139 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG--YGEE-LD------------------GFFAEYAKVKVTSLVKVPPNVSDE 139 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc--cccc-cC------------------ceeeeeeecchhceEECCCCCCHH
Confidence 99999889999999999999999987543 2211 12 489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
+++.+++.+.+|++++.+. +++++++|+|+|+ |.+|++++++|++.|+ +++++++++++++.++++ ++.+++.+
T Consensus 140 ~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-- 214 (334)
T PRK13771 140 GAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-- 214 (334)
T ss_pred HhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch--
Confidence 9999999999999998554 8899999999987 9999999999999999 899999999999999888 76666652
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe--eecchheeeeccEEEecccCCCCc
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE--VAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~--~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
.+.+.++++ +++|++||++|+. .+..++++++++ |+++.+|....... ..+... +.+++++.+.... .
T Consensus 215 --~~~~~v~~~--~~~d~~ld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~ 284 (334)
T PRK13771 215 --KFSEEVKKI--GGADIVIETVGTP-TLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYI-ILKDIEIIGHISA---T 284 (334)
T ss_pred --hHHHHHHhc--CCCcEEEEcCChH-HHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHH-HhcccEEEEecCC---C
Confidence 455666664 3799999999974 688999999997 99999987543222 222222 3457788776422 2
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
++++.++++++.++.++. .++++|+++++.+||+.+.++... |+++.+
T Consensus 285 ~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 285 KRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 456888999999998753 366899999999999999887766 888865
No 56
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=4.8e-38 Score=293.12 Aligned_cols=325 Identities=27% Similarity=0.391 Sum_probs=265.9
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C-----eEEEEEeeCCCCCCCCCCCE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q-----CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~-----~~G~V~~~G~~v~~~~~Gd~ 83 (371)
|||+++++++...++++.|.|.+.++||+|||.++++|++|++.+.|..+ . ++|+|+++|++++.|++||+
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~ 80 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKVGDR 80 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCCCCccCCcccceEEEEECCCCccCCCCCE
Confidence 79999999887544899999999999999999999999999988877542 1 69999999999999999999
Q ss_pred EEeee-cCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 84 VLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 84 V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
|++.+ ..+|+.|.+|..+..++|.+... .|+. .+ |+|++|+.++.+.++++|+++++.
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~~~ 139 (338)
T PRK09422 81 VSIAWFFEGCGHCEYCTTGRETLCRSVKN--AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLDPA 139 (338)
T ss_pred EEEccCCCCCCCChhhcCCCcccCCCccc--cCcc-cc------------------CcceeEEEEchHHeEeCCCCCCHH
Confidence 99765 57899999999999999987542 2332 22 489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
+++.++.++.|||+++ ..+++++|++|||+|+|++|++++++|+++ |+ +|+++++++++++.++++|++.+++++.
T Consensus 140 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~- 216 (338)
T PRK09422 140 QASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR- 216 (338)
T ss_pred HeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-
Confidence 9999999999999997 778899999999999999999999999985 99 8999999999999999999998888752
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
..++.+.+++.++ ++|+++.+.++...+..++++++.+ |+++.+|.......++... ...++.++.++.... .+
T Consensus 217 ~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~ 290 (338)
T PRK09422 217 VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDLSIPR-LVLDGIEVVGSLVGT---RQ 290 (338)
T ss_pred cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCceecHHH-HhhcCcEEEEecCCC---HH
Confidence 2456777777765 7885555555556899999999997 9999998653322222211 223466776654322 34
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
.+..+++++.++++.. .+ +.++++++.+||+.+.++... |+++.+.
T Consensus 291 ~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 291 DLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 6788899999998653 34 468999999999999988877 9988654
No 57
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=4.7e-38 Score=290.87 Aligned_cols=311 Identities=24% Similarity=0.317 Sum_probs=255.5
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-------eEEEEEeeCCCCCCCCCCCEEE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-------CCRIVESVGPGVTEFNEGEHVL 85 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-------~~G~V~~~G~~v~~~~~Gd~V~ 85 (371)
|||+++.+++ ++++.+.|.|+++++||+||+.++++|++|+....|.++. ++|+|+++|++ +++||+|.
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~ 76 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYPFPGVPGHEFVGIVEEGPEA---ELVGKRVV 76 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCCCCCccCceEEEEEEEeCCC---CCCCCeEE
Confidence 6899998876 4999999999999999999999999999999998886531 69999999998 67999999
Q ss_pred eeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhh
Q 017460 86 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa 165 (371)
..+...|+.|.+|+.+.++.|...... ++... .|+|++|++++.+.++++|++++.++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~~~aa 136 (319)
T cd08242 77 GEINIACGRCEYCRRGLYTHCPNRTVL--GIVDR------------------DGAFAEYLTLPLENLHVVPDLVPDEQAV 136 (319)
T ss_pred ECCCcCCCCChhhhCcCcccCCCCccc--CccCC------------------CCceEEEEEechHHeEECcCCCCHHHhh
Confidence 999999999999999999988875431 11001 2489999999999999999999999888
Q ss_pred hcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchH
Q 017460 166 LLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPV 245 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~ 245 (371)
.+ .++.+++.++ +..+++++++|||+|+|.+|++++|+|+.+|+ +|++++.++++++.++++|++.+++++ ..
T Consensus 137 ~~-~~~~~~~~~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~--~~-- 209 (319)
T cd08242 137 FA-EPLAAALEIL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDE--AE-- 209 (319)
T ss_pred hh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcc--cc--
Confidence 65 3556666654 77889999999999999999999999999999 799999999999999999998877764 11
Q ss_pred HHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCCHH
Q 017460 246 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP 324 (371)
Q Consensus 246 ~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~ 324 (371)
+.+ ++|++||++|+...+..++++++++ |+++..+.......+++.. .+.++.++.+.... .+.
T Consensus 210 -------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~------~~~ 274 (319)
T cd08242 210 -------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASFDLTK-AVVNEITLVGSRCG------PFA 274 (319)
T ss_pred -------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCccCHHH-heecceEEEEEecc------cHH
Confidence 334 8999999999866789999999997 9999876543322222222 22457777766432 378
Q ss_pred HHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 325 SLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 325 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
++++++.++++++.+++++.|+++++.+||+.++++...|++|++
T Consensus 275 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 275 PALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred HHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 899999999987666678999999999999999877655998864
No 58
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=5.8e-38 Score=293.16 Aligned_cols=325 Identities=29% Similarity=0.418 Sum_probs=270.2
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC-----CC-----eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW-----PQ-----CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~-----~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++++++. +.+.+.+.|++.+++|+||++++++|+.|+.++.|.+ +. ++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 68999988875 9999999999999999999999999999999887754 21 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCc-----eEECCC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGC-----AVKVSS 157 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~-----~~~~P~ 157 (371)
+|++.+...|++|++|..++.++|...... |.. . .|+|++|+.++++. ++++|+
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~------------------~g~~~~~v~v~~~~~~~~~~~~lP~ 138 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF--GNL-Y------------------DGGFAEYVRVPAWAVKRGGVLKLPD 138 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCccee--ccC-C------------------CCcceeeEEecccccccccEEECCC
Confidence 999999999999999999999999876542 211 1 24899999999998 999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
++++.+++.+ .++.+|++++ ...++++|++|||+|+|.+|++++++|+..|++.|+++++++++.+.++++|++++++
T Consensus 139 ~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~ 216 (343)
T cd08235 139 NVSFEEAALV-EPLACCINAQ-RKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTID 216 (343)
T ss_pred CCCHHHHHhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEec
Confidence 9999999877 6889999998 4558999999999988999999999999999933999999999999999999998998
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEecccC
Q 017460 238 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~ 315 (371)
++ +.++.+.+++++++ ++|+|+|++++...+...+++++++ |+++.++.........+.. ....++.++.++...
T Consensus 217 ~~--~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 293 (343)
T cd08235 217 AA--EEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYAA 293 (343)
T ss_pred CC--ccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEecC
Confidence 87 56788888888877 8999999999766788999999997 9999998654322122221 122346666655432
Q ss_pred CCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 316 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
. .+.+..+++++.++.+.+.+.+..+|+++++.++++.+.+++ . |+|+.
T Consensus 294 ~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 294 S---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred C---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 2 356888899999998875444568899999999999999888 6 88863
No 59
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=7.7e-38 Score=291.60 Aligned_cols=324 Identities=29% Similarity=0.433 Sum_probs=271.6
Q ss_pred eeEEEEecCCCC-eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCCC
Q 017460 13 CKAAVAWGAGQP-LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 13 ~~a~~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~~ 80 (371)
||++++..++.+ +.+.+.|.|.+.+++|+|++.++++|++|+..+.|.++ + ++|+|+.+|++++.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 799999998887 67788889999999999999999999999999888654 1 59999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|+..+..+|+.|..|+.++.++|..... .|+. .+ |+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~~ 139 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM--PGLG-ID------------------GGFAEYIVVPARALVPVPDGVP 139 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc--cccc-cC------------------CcceeeEEechHHeEECCCCCC
Confidence 9999999999999999999999999965432 2222 22 4899999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
.++++.++.++.+||+++....+++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++++++.+
T Consensus 140 ~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~- 217 (338)
T cd08254 140 FAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL- 217 (338)
T ss_pred HHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC-
Confidence 999999999999999998777889999999999889999999999999999 899999999999999999998888775
Q ss_pred CCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCc
Q 017460 241 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKP 319 (371)
Q Consensus 241 ~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 319 (371)
+..+.+.+ ..+.+ ++|+++|++|....++.++++++++ |+++.+|.......++... .+.++.++.++....
T Consensus 218 -~~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~--- 290 (338)
T cd08254 218 -DDSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSD-LIARELRIIGSFGGT--- 290 (338)
T ss_pred -CcCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccCHHH-HhhCccEEEEeccCC---
Confidence 44565666 55555 8999999998767889999999997 9999998654322232221 223466777654321
Q ss_pred CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...+..+++++.++.+.+. .+.|+++++.++++.+.+++.. |+++++
T Consensus 291 ~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 291 PEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 3568888999999987754 3789999999999999988877 888864
No 60
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=8.6e-38 Score=295.98 Aligned_cols=328 Identities=26% Similarity=0.377 Sum_probs=260.9
Q ss_pred eeeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC------CC------C-----eEEEEEeeCCC
Q 017460 12 TCKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------WP------Q-----CCRIVESVGPG 74 (371)
Q Consensus 12 ~~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------~~------~-----~~G~V~~~G~~ 74 (371)
.+.+.++... +++++++|.|++++++|+||+.++++|++|++.+.+. ++ . ++|+|+++|++
T Consensus 28 ~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 28 NLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred cceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence 3455566543 4999999999999999999999999999999877521 01 1 69999999999
Q ss_pred CCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEE
Q 017460 75 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVK 154 (371)
Q Consensus 75 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~ 154 (371)
++.|++||+|++.+..+|+.|+.|+.+++++|..... .|+. .+ |+|++|+.++++.+++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~--~g~~-~~------------------g~~~~~v~v~~~~~~~ 164 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE--LGFS-AD------------------GAFAEYIAVNARYAWE 164 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce--eeec-CC------------------CcceeeEEechHHeEE
Confidence 9999999999999999999999999999999986542 2221 12 4899999999999999
Q ss_pred CCCCC-------ChhhhhhcchhhhhHHhHhhhh-cCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 017460 155 VSSIA-------PLEKICLLSCGLSAGLGAAWNV-ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 226 (371)
Q Consensus 155 ~P~~~-------~~~~aa~~~~~~~~a~~~l~~~-~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~ 226 (371)
+|+++ +.+ ++.+..++++||+++... .++++|++|||+|+|++|++++++|+++|+.+|++++++++|.+.
T Consensus 165 lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~ 243 (384)
T cd08265 165 INELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNL 243 (384)
T ss_pred CCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH
Confidence 99863 455 555556889999998655 689999999999889999999999999998779999999999999
Q ss_pred HHHcCCceEeCCCCC-CchHHHHHHHHhCC-CccEEEEcCCCh-HHHHHHHHHhccCCceEEEecCCCCCCeeecchhee
Q 017460 227 AKAFGVTEFLNPNDN-NEPVQQVIKRITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF 303 (371)
Q Consensus 227 ~~~lg~~~vi~~~~~-~~~~~~~v~~~~~g-g~dvVid~~g~~-~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~ 303 (371)
++++|++++++++.. ..++.+.+++++++ ++|+|+|++|+. ..+..++++++++ |+++.+|.......+... ...
T Consensus 244 ~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~ 321 (384)
T cd08265 244 AKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATTVPLHLE-VLQ 321 (384)
T ss_pred HHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCCCcccHH-HHh
Confidence 999999988887521 22678889998887 999999999863 3678899999997 999999865432222211 111
Q ss_pred eeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEE
Q 017460 304 LSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 367 (371)
Q Consensus 304 ~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi 367 (371)
.+..++.+...... ...+.++++++.++.+++.++++++|+++++.+|++.+.++...|+++
T Consensus 322 ~~~~~l~~~~~~~~--~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~kvvv 383 (384)
T cd08265 322 VRRAQIVGAQGHSG--HGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASERTDGKITI 383 (384)
T ss_pred hCceEEEEeeccCC--cchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEe
Confidence 34567776643221 346889999999999876655678999999999999976654337775
No 61
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7.8e-38 Score=292.05 Aligned_cols=315 Identities=23% Similarity=0.384 Sum_probs=253.4
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC------------C----CC-----eEEEEEee
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------------W----PQ-----CCRIVESV 71 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------------~----~~-----~~G~V~~~ 71 (371)
|||+++.++ .+++++++.|++.+++|+||+.++++|++|++.+.|. . +. ++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 789999776 5999999999999999999999999999999888761 1 11 59999999
Q ss_pred CCCCCC-CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC
Q 017460 72 GPGVTE-FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG 150 (371)
Q Consensus 72 G~~v~~-~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~ 150 (371)
|+++++ +++||+|++.+..+|+.|+.|..+ +. .. ..|+|+||++++.+
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~--------------~~-~~----------------~~g~~~~~~~v~~~ 127 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIG--------------LS-PE----------------APGGYAEYMLLSEA 127 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCC--------------CC-cC----------------CCCceeeeEEechH
Confidence 999987 999999999999999999999321 10 00 02489999999999
Q ss_pred ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc
Q 017460 151 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF 230 (371)
Q Consensus 151 ~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l 230 (371)
.++++|++++.++++ ++.++++||+++ ..++++++++|||+|+|.+|.+++|+|+.+|++.++++++++++.+.++++
T Consensus 128 ~~~~lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~ 205 (341)
T cd08262 128 LLLRVPDGLSMEDAA-LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAM 205 (341)
T ss_pred HeEECCCCCCHHHhh-hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHc
Confidence 999999999999887 556888999985 788999999999999899999999999999996688888899999999999
Q ss_pred CCceEeCCCCCCc--hHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeecc
Q 017460 231 GVTEFLNPNDNNE--PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 307 (371)
Q Consensus 231 g~~~vi~~~~~~~--~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
|++++++++.... .+. .+...+.+ ++|++||++|+...+..++++++++ |+++.+|......... +...+.++.
T Consensus 206 g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~-~~~~~~~~~ 282 (341)
T cd08262 206 GADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIE-PALAIRKEL 282 (341)
T ss_pred CCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccC-HHHHhhcce
Confidence 9988998762110 222 34555555 8999999998754788899999997 9999998763322111 111123566
Q ss_pred EEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 308 TLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 308 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
++.++.... .+.+.++++++.++.+.+.++++++|++++++++++.+.+++.. |++++
T Consensus 283 ~~~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 283 TLQFSLGYT---PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred EEEEEeccc---HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 666543221 24688899999999988766677999999999999999988877 88874
No 62
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.3e-37 Score=290.57 Aligned_cols=326 Identities=31% Similarity=0.411 Sum_probs=264.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC------C--CC-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ------W--PQ-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~------~--~~-----~~G~V~~~G~~v~~~~ 79 (371)
|||++++.++..+++.+.+.|.+.++|++||+.++++|++|+.++.+. . +. ++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 789999988766999999999999999999999999999998774331 1 11 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+..+..+|+.|.+|..+++++|.... ..|.. . .|+|++|++++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~------------------~g~~~~~v~v~~~~~~~lP~~~ 139 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTK--ILGVD-T------------------DGCFAEYVVVPEENLWKNDKDI 139 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCcccc--eEecc-C------------------CCcceEEEEechHHcEECcCCC
Confidence 9999999999999999999999999997642 22221 1 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
+.+.+ .+..++.++++++. ...++|++|||+|+|.+|++++++|++.|+.+|++++++++|.+.++++|++++++++
T Consensus 140 ~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 216 (341)
T cd05281 140 PPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR 216 (341)
T ss_pred CHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc
Confidence 98555 45557888888763 4567899999998899999999999999986688888889999999999999888876
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 318 (371)
..++. .+.+++++ ++|++||++|+...+..++++++++ |+++.+|.......+.+....+.++.++.+.....
T Consensus 217 --~~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 290 (341)
T cd05281 217 --EEDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRK-- 290 (341)
T ss_pred --cccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEecCC--
Confidence 45677 78888877 9999999998876789999999997 99999986543222222222334566776654221
Q ss_pred cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 319 PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
....+.++++++.++.+.+.+.+.++++++++.++|+.+.+++ . |+++++
T Consensus 291 ~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 291 MFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred cchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 1245778899999999876666678899999999999999888 7 998864
No 63
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=1.5e-37 Score=293.46 Aligned_cols=332 Identities=24% Similarity=0.360 Sum_probs=264.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCCC---C------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQWP---Q------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---~------~~G~V~~~G~~v~~~~~Gd 82 (371)
||++++.+++ +++++++|.|.+ +++||+||+.++++|++|++.+.|.++ + ++|+|+++|++++.+++||
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGD 79 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCCCCCceeccccEEEEEEeCCCCCcCCCCC
Confidence 6889998876 499999999996 799999999999999999999988653 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccc----cccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECC
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLER----RGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVS 156 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~----~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P 156 (371)
+|+..+..+|+.|..|..++.+.|....+.. +|+.+.. ...|+|++|+.++.+ .++++|
T Consensus 80 ~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~g~~a~y~~v~~~~~~~~~lP 144 (375)
T cd08282 80 RVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMG---------------PYGGGQAEYLRVPYADFNLLKLP 144 (375)
T ss_pred EEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccC---------------CCCCeeeeEEEeecccCcEEECC
Confidence 9999999999999999999999998643221 1111000 002589999999976 899999
Q ss_pred CCCChh---hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 017460 157 SIAPLE---KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 233 (371)
Q Consensus 157 ~~~~~~---~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 233 (371)
++++++ +++.+..++++||+++ ..+.+++|++|+|.|+|.+|++++|+|+++|+.+|++++++++|.+.++++|+.
T Consensus 145 ~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~ 223 (375)
T cd08282 145 DRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI 223 (375)
T ss_pred CCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe
Confidence 999998 5677777899999998 788999999999998899999999999999976788999999999999999984
Q ss_pred eEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChH-----------HHHHHHHHhccCCceEEEecCCCCCCe-------
Q 017460 234 EFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG-----------MITTALQSCCDGWGLAVTLGVPKLKPE------- 295 (371)
Q Consensus 234 ~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~-----------~l~~~~~~l~~~~G~~v~~g~~~~~~~------- 295 (371)
.++++ ..++.+.+.+++++++|+++||+|... .+..++++++++ |+++.+|.......
T Consensus 224 -~v~~~--~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~ 299 (375)
T cd08282 224 -PIDFS--DGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAA 299 (375)
T ss_pred -EeccC--cccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccc
Confidence 56665 456777888877668999999998752 478999999997 99988876432100
Q ss_pred ----eecchhe-eeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 296 ----VAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 296 ----~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..+.... +.++..+.+.... ....+..+++++.++++++.++++++|++++++++++.+.++. . |+++++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 300 KQGELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred cCccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 1111111 1234444443321 1346788899999999876555789999999999999998888 6 998753
No 64
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.4e-37 Score=290.50 Aligned_cols=322 Identities=30% Similarity=0.455 Sum_probs=262.2
Q ss_pred EEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcC----C----CCC-----eEEEEEeeCCCCCCCCCC
Q 017460 15 AAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWET----Q----WPQ-----CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 15 a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g----~----~~~-----~~G~V~~~G~~v~~~~~G 81 (371)
|+++++++. +++.+.|.|.+.++||+|||.++++|+.|++.+.+ . .+. ++|+|+++|++++.+++|
T Consensus 1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 467778865 99999999999999999999999999999876531 1 111 699999999999999999
Q ss_pred CEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 82 EHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 82 d~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
|+|++.+..+|+.|++|..+.+++|.+..+. +.... .|+|++|++++++.++++|++++.
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~~ 139 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA--ATPPV------------------DGTLCRYVNHPADFCHKLPDNVSL 139 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc--ccccC------------------CCceeeeEEecHHHcEECcCCCCH
Confidence 9999999999999999999999999754321 10001 248999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
++++.+ .++++|++++ +.+++++|++|||+|+|.+|++++++|+++|++.|+++++++++.+.++++|++.+++++
T Consensus 140 ~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~-- 215 (343)
T cd05285 140 EEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVR-- 215 (343)
T ss_pred HHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccc--
Confidence 999877 4788999986 889999999999998899999999999999994499999999999999999999999886
Q ss_pred Cch---HHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 242 NEP---VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 242 ~~~---~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
..+ +.+.+.+.+++ ++|++||++|+...+...+++++++ |+++.+|.......+++. ....++.++.++...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 291 (343)
T cd05285 216 TEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY-- 291 (343)
T ss_pred cccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC--
Confidence 344 37778888877 8999999999865788999999997 999999865432222222 122346666665422
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC-e-eeEEE
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK-C-LRSVI 367 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~-~-~kvvi 367 (371)
...+..+++++.++.+.+.+.+.++|+++++.+|++.+.+++ . .|++|
T Consensus 292 --~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 292 --ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred --hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 246888899999998765555678999999999999998875 3 49987
No 65
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=1.4e-37 Score=289.71 Aligned_cols=324 Identities=23% Similarity=0.368 Sum_probs=264.0
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C-----eEEEEEeeCCCCCCCCCCCE
Q 017460 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q-----CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~-----~~G~V~~~G~~v~~~~~Gd~ 83 (371)
|+++.+..+..+++.+++.|++.++||+||+.++++|++|++.+.|... . ++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 5677878777799999999999999999999999999999999887542 1 69999999999999999999
Q ss_pred EE-eeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 84 VL-TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 84 V~-~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
|+ ......|++|++|+.++.++|.......+|.. ..+ ....|+|+||+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~ 146 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKY-PDG-------------TITQGGYADHIVVDERFVFKIPEGLDSA 146 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcccccc-cCC-------------CcCCCcceeEEEechhheEECCCCCCHH
Confidence 98 44556899999999999999987554322211 101 0113589999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++.+.+.+.+||+++ +..++++|++|+|.|+|.+|++++++|+..|+ +++++++++++++.++++|++.+++.+ .
T Consensus 147 ~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~--~ 222 (337)
T cd05283 147 AAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATK--D 222 (337)
T ss_pred HhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCc--c
Confidence 9999999999999987 45568999999999889999999999999999 999999999999999999999888775 3
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhe-eeeccEEEecccCCCCcCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~~~~~~ 321 (371)
.++.. . .++++|++||+++....+..++++++++ |+++.+|...... .++... +.++.++.++.... .+
T Consensus 223 ~~~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~~ 292 (337)
T cd05283 223 PEAMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---RK 292 (337)
T ss_pred hhhhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---HH
Confidence 23322 1 2348999999999865588999999997 9999998764322 222222 34688888877653 35
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
++..+++++.++++.+ .+ ++|+++++++||+.+.+++.. |+||+
T Consensus 293 ~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 293 ETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 7888899999998754 34 789999999999999998887 88874
No 66
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.7e-37 Score=287.75 Aligned_cols=327 Identities=28% Similarity=0.453 Sum_probs=267.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC----CC-----eEEEEEeeCCCCCCCCCCCE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW----PQ-----CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~-----~~G~V~~~G~~v~~~~~Gd~ 83 (371)
|||+++++.+. +++++.+.|+++++||+||+.++++|++|+..+.|.+ +. ++|+|+.+|++++.|++||+
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~ 79 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCCCCCcccCcceEEEEEEECCCCCcCCCCCE
Confidence 78999998875 9999999999999999999999999999998887754 11 69999999999999999999
Q ss_pred EEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh
Q 017460 84 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 163 (371)
Q Consensus 84 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~ 163 (371)
|++.+...|+.|.+|..+....|..... .|.. . .|+|++|+.++++.++++|+++++++
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~lP~~~~~~~ 138 (343)
T cd08236 80 VAVNPLLPCGKCEYCKKGEYSLCSNYDY--IGSR-R------------------DGAFAEYVSVPARNLIKIPDHVDYEE 138 (343)
T ss_pred EEEcCCCCCCCChhHHCcChhhCCCcce--Eecc-c------------------CCcccceEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999987643 1111 1 24899999999999999999999999
Q ss_pred hhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 164 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
++++ .++++||+++ ....++++++|||+|+|.+|++++++|+++|+.+|+++++++++.+.++++|++.+++++ ..
T Consensus 139 aa~~-~~~~ta~~~l-~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~--~~ 214 (343)
T cd08236 139 AAMI-EPAAVALHAV-RLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPK--EE 214 (343)
T ss_pred HHhc-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCc--cc
Confidence 9888 4788999998 478899999999998899999999999999994499999999999999999998899886 44
Q ss_pred hHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecc-h-heeeeccEEEecccCCCCc-
Q 017460 244 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-Y-GLFLSGRTLKGSLFGGWKP- 319 (371)
Q Consensus 244 ~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~-~-~~~~~~~~i~g~~~~~~~~- 319 (371)
. .+.++...++ ++|++||++|....+..++++++++ |+++.+|.......+... . ..+.++.++.++.......
T Consensus 215 ~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (343)
T cd08236 215 D-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPF 292 (343)
T ss_pred c-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccccc
Confidence 5 6777777777 8999999998766789999999997 999999865432212111 1 1123577777765432211
Q ss_pred -CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHc-CCee-eEEE
Q 017460 320 -KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKE-GKCL-RSVI 367 (371)
Q Consensus 320 -~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~-~~~~-kvvi 367 (371)
.+.+.++++++.++.+.+.+.+...++++++.++++.+.+ .... |+|+
T Consensus 293 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 293 PGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred chhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 3467788889999987644445689999999999999988 5555 7764
No 67
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=5.6e-37 Score=286.28 Aligned_cols=324 Identities=29% Similarity=0.439 Sum_probs=271.5
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCCC
Q 017460 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~~ 80 (371)
|||++++.++ ..+++.+++.|.+.+++++||+.++++|++|..++.|.++ + ++|+|+++|++++.+++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7999998876 3499999999999999999999999999999988877543 1 69999999999999999
Q ss_pred CCEEEeee-cCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 81 GEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 81 Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
||+|+..+ ...|+.|.+|+.++.++|..... .|+. .. |++++|+.++++.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~s~~~~~~~~~~~lp~~~ 139 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN--SGYT-VD------------------GTFAEYAIADARYVTPIPDGL 139 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc--cccc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99999876 57899999999999999977543 2322 22 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+..+++.++..+.+||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++++++++++.++++|++.++++
T Consensus 140 ~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~ 217 (341)
T cd08297 140 SFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDF 217 (341)
T ss_pred CHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcC
Confidence 999999999899999999754 58999999999986 6799999999999999 99999999999999999999999988
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhe-eeeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 316 (371)
+ ..++.+.+.+++++ ++|++||+.++...+..++++++++ |+++.+|.... ...+++... +.++.++.+.....
T Consensus 218 ~--~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 293 (341)
T cd08297 218 K--KSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGT 293 (341)
T ss_pred C--CccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccCC
Confidence 6 55788888888876 9999999887667889999999997 99999986543 222222221 14577777654322
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.+.+.++++++.++++.+ .+ +.|+++++.++|+.+..+... |+++++
T Consensus 294 ---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 294 ---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred ---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 356888999999998754 34 679999999999999988877 998875
No 68
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=3e-38 Score=286.49 Aligned_cols=264 Identities=23% Similarity=0.331 Sum_probs=215.3
Q ss_pred eEEEEEeeCCCCC------CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccC
Q 017460 64 CCRIVESVGPGVT------EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCA 137 (371)
Q Consensus 64 ~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~ 137 (371)
++|+|+++|++|+ +|++||||++.+..+|+.|.+|+.++++.|.+.... |.. ..+. +...
T Consensus 6 ~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~--g~~-~~~~-----------~~~~ 71 (280)
T TIGR03366 6 IVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY--GHE-ALDS-----------GWPL 71 (280)
T ss_pred cceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc--Ccc-cccC-----------Cccc
Confidence 6899999999999 899999999999999999999999999999875532 211 0000 0001
Q ss_pred ccceeeEEEeeCC-ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEE
Q 017460 138 VSSFSEYTVVHSG-CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIG 216 (371)
Q Consensus 138 ~g~~a~~~~~~~~-~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~ 216 (371)
.|+|+||++++++ .++++|+++++++++.+++.+.|+++++ +.....++++|||+|+|++|++++|+|+++|+++|++
T Consensus 72 ~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~ 150 (280)
T TIGR03366 72 SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVA 150 (280)
T ss_pred cccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEE
Confidence 2589999999987 7999999999999999998999999987 5556679999999999999999999999999955999
Q ss_pred EcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe
Q 017460 217 VDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE 295 (371)
Q Consensus 217 ~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~ 295 (371)
++++++|+++++++|++.++++. . ..+.+++++++ ++|++||++|....++.++++++++ |+++.+|.......
T Consensus 151 ~~~~~~r~~~a~~~Ga~~~i~~~--~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~ 225 (280)
T TIGR03366 151 ADPSPDRRELALSFGATALAEPE--V--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGSVFPGGP 225 (280)
T ss_pred ECCCHHHHHHHHHcCCcEecCch--h--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEeccCCCCCc
Confidence 99999999999999999888864 2 35567777777 8999999999877899999999997 99999997542223
Q ss_pred eecchhe-eeeccEEEecccCCCCcCCCHHHHHHHHHcC--CCCCCcceeeeecchhH
Q 017460 296 VAAHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKK--EFMVDEFITHNLLFEDI 350 (371)
Q Consensus 296 ~~~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~~~~~ 350 (371)
.+++... +.+++++.|+.... .+++.++++++.++ ++++.++++++|+++++
T Consensus 226 ~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 226 VALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred eeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 3333322 35689999876432 35789999999984 66677889999999873
No 69
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=8.8e-37 Score=283.70 Aligned_cols=319 Identities=30% Similarity=0.478 Sum_probs=263.3
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++..+++++.+.+.|.|.+.+++|+|+++++++|++|++.+.|.++. ++|+|+++|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 789999876667999999999999999999999999999999998875431 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.++..|+.|++|..+..++|.+.. ..|.. . .|+|++|++++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~ 139 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA--EYGEE-V------------------DGGFAEYVKVPERSLVKLPDNVSDE 139 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc--ccccc-c------------------CCeeeeEEEechhheEECCCCCCHH
Confidence 9999999999999999999999998752 23332 2 2489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
+++.+++++.+||+++.. +++.+++++||+|+ |.+|++++++++..|+ +|+++++++++.+.++++|.+.+++..
T Consensus 140 ~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (332)
T cd08259 140 SAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS-- 215 (332)
T ss_pred HHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH--
Confidence 999999999999999855 88999999999986 9999999999999999 899999999999999999988777663
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe-eecchheeeeccEEEecccCCCCcC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~ 320 (371)
+ +.+.+.+.. ++|++++++|.. .+..++++++++ |+++.++....... +...... .++.++.++... ..
T Consensus 216 ~--~~~~~~~~~--~~d~v~~~~g~~-~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~ 285 (332)
T cd08259 216 K--FSEDVKKLG--GADVVIELVGSP-TIEESLRSLNKG-GRLVLIGNVTPDPAPLRPGLLI-LKEIRIIGSISA---TK 285 (332)
T ss_pred H--HHHHHHhcc--CCCEEEECCChH-HHHHHHHHhhcC-CEEEEEcCCCCCCcCCCHHHHH-hCCcEEEEecCC---CH
Confidence 2 556665543 799999999975 578899999996 99999986543211 1222222 346666655321 13
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.++.++++++.++.+.+ .++++|+++++.+||+.+.++... |++++
T Consensus 286 ~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 286 ADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 46788899999988654 366899999999999999988777 88763
No 70
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4.5e-37 Score=284.80 Aligned_cols=299 Identities=19% Similarity=0.276 Sum_probs=250.2
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCCCC
Q 017460 13 CKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVTEF 78 (371)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~~~ 78 (371)
|||+++.+++++ +++.++|.|.+.++||+|||.++++|++|++.+.|.++ . ++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 789999887753 78899999999999999999999999999998877543 1 699999999999999
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
++||+|++.+ .. |+|++|+.+++..++++|++
T Consensus 81 ~~Gd~V~~~~------------------------------~~------------------g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 81 QVGQRVAVAP------------------------------VH------------------GTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred CCCCEEEecc------------------------------CC------------------CcceeEEEEchHHeEECCCC
Confidence 9999999862 12 38999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
++.++++.+++.+.++++++ +.+++++|++|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVS 190 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEc
Confidence 99999999988889999987 5688999999999986 9999999999999999 8999989999999998899988888
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEEEecccC
Q 017460 238 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~ 315 (371)
++ ..++.+.+++++++ ++|+|||++|+. .+..++++++++ |+++.+|.... ....+... .+.++.++.++...
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 265 (324)
T cd08292 191 TE--QPGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG-GTLVSFGSMSG-EPMQISSGDLIFKQATVRGFWGG 265 (324)
T ss_pred CC--CchHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC-cEEEEEecCCC-CCCcCCHHHHhhCCCEEEEEEcH
Confidence 86 66788899999988 999999999985 678999999997 99999986532 22222221 22468888877654
Q ss_pred CCCc-------CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 316 GWKP-------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 316 ~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.+.. ...+.++++++.++.+++. +.++|+++++.+|++.+.++... |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 266 RWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence 3221 1357778889999988754 35889999999999999877666 88763
No 71
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.2e-36 Score=283.49 Aligned_cols=325 Identities=23% Similarity=0.349 Sum_probs=269.1
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~ 79 (371)
|||+++...+. .+++.+.+.|.+.+++|+|+++++++|++|++++.|..+ + ++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68999874443 378888888889999999999999999999998887643 1 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.+...|+.|.+|.++++++|....+ .|.. .. |+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~~------------------g~~~~~~~~~~~~~~~~p~~~ 139 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI--LGEH-VD------------------GGYAEYVAVPARNLLPIPDNL 139 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc--cccc-cC------------------cceeEEEEechHHceeCCCCC
Confidence 99999999999999999999999999987532 2221 11 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+..+++.+++++.+|++++.+..++.++++++|+|+ +.+|+++++++++.|+ +|+++++++++.+.+++++.+.+++.
T Consensus 140 ~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~ 218 (342)
T cd08266 140 SFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY 218 (342)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec
Confidence 999999999899999999877888999999999986 7999999999999999 89999999999999988988777776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~ 316 (371)
. +.++.+.+...+.+ ++|++++++|.. .+...+++++++ |+++.++..... ...... ..+.++.++.+.....
T Consensus 219 ~--~~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
T cd08266 219 R--KEDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMGT 293 (342)
T ss_pred C--ChHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecCC
Confidence 5 55677777777766 899999999974 688999999997 999999866442 112222 2234577777765433
Q ss_pred CCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...+..+++++.++.+.+ ++++.|+++++.++++.+.++... |+++++
T Consensus 294 ---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 294 ---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred ---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 236778888998888654 356899999999999999887776 888763
No 72
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1.8e-36 Score=282.11 Aligned_cols=321 Identities=29% Similarity=0.439 Sum_probs=264.7
Q ss_pred eeEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC---------eEEEEEeeCCCCCCCCCCCE
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ---------CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~---------~~G~V~~~G~~v~~~~~Gd~ 83 (371)
|||+++.++++ +++.+.+.|+++++||+||++++++|+.|+....|.++. ++|+|+.+|++++.+++||+
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~ 79 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDR 79 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence 78999988875 999999999999999999999999999999988876431 69999999999999999999
Q ss_pred EEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh
Q 017460 84 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 163 (371)
Q Consensus 84 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~ 163 (371)
|++.+...|+.|.+|..+++++|..... .|.. .. |+|++|+.++.+.++++|++++..+
T Consensus 80 V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~lP~~~~~~~ 138 (334)
T cd08234 80 VAVDPNIYCGECFYCRRGRPNLCENLTA--VGVT-RN------------------GGFAEYVVVPAKQVYKIPDNLSFEE 138 (334)
T ss_pred EEEcCCcCCCCCccccCcChhhCCCcce--eccC-CC------------------CcceeEEEecHHHcEECcCCCCHHH
Confidence 9998889999999999999999987653 2211 12 4899999999999999999999999
Q ss_pred hhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 164 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
++.+ ..+.++++++ ..++++++++|||+|+|.+|++++++|++.|+.+|+++++++++.+.++++|++.++++. ..
T Consensus 139 aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~ 214 (334)
T cd08234 139 AALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPS--RE 214 (334)
T ss_pred Hhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCC--CC
Confidence 9876 6888999987 788999999999998899999999999999994489999999999999999998888776 34
Q ss_pred hHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCCCcCC
Q 017460 244 PVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 244 ~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~ 321 (371)
++... +.+.+ ++|++||+++....+...+++++++ |+++.+|.........+....+ .++.++.+.... ..
T Consensus 215 ~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 287 (334)
T cd08234 215 DPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----PY 287 (334)
T ss_pred CHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----HH
Confidence 44444 34444 8999999998766788999999997 9999998654322233333222 246677665432 24
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.+.++++++.++++.+.+.++.+|+++++.++++.+.+ ... |++|
T Consensus 288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 288 TFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 68888999999988766556789999999999999988 555 8776
No 73
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=8.7e-37 Score=285.03 Aligned_cols=304 Identities=20% Similarity=0.243 Sum_probs=239.7
Q ss_pred ceeeeEEEEecCCC------CeEEEEe---ecCC-CCCCcEEEEEeeecCCcchhhhhcC---C--CCC-------eEEE
Q 017460 10 VITCKAAVAWGAGQ------PLVVEEV---EVNP-PQPEEIRIKVVCTSLCRSDITAWET---Q--WPQ-------CCRI 67 (371)
Q Consensus 10 ~~~~~a~~~~~~~~------~l~~~~~---~~p~-~~~~evlV~v~~~~i~~~D~~~~~g---~--~~~-------~~G~ 67 (371)
+.+.|++++.+..+ .|++.+. +.|. +++||||||+.|+++|+.|.....+ . .|. .+|+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~ 85 (348)
T PLN03154 6 VVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGV 85 (348)
T ss_pred cccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEE
Confidence 44568888744332 1777763 5653 4899999999999999998764322 1 121 4889
Q ss_pred EEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEe
Q 017460 68 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 147 (371)
Q Consensus 68 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~ 147 (371)
|..+|++++.|++||+|+.. |+|+||..+
T Consensus 86 v~~vg~~v~~~~~Gd~V~~~---------------------------------------------------~~~aey~~v 114 (348)
T PLN03154 86 SKVVDSDDPNFKPGDLISGI---------------------------------------------------TGWEEYSLI 114 (348)
T ss_pred EEEEecCCCCCCCCCEEEec---------------------------------------------------CCcEEEEEE
Confidence 99999999999999999854 379999999
Q ss_pred eCC--ceEE--CCCCCChh-hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 148 HSG--CAVK--VSSIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 148 ~~~--~~~~--~P~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.. .+++ +|++++++ +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++
T Consensus 115 ~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~ 193 (348)
T PLN03154 115 RSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSS 193 (348)
T ss_pred eccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCH
Confidence 875 3544 59999986 688899999999999877788999999999986 9999999999999999 899999999
Q ss_pred hhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCC-ee---
Q 017460 222 EKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP-EV--- 296 (371)
Q Consensus 222 ~~~~~~~-~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~-~~--- 296 (371)
++++.++ ++|+++++++++ ..++.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 194 ~k~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~ 270 (348)
T PLN03154 194 QKVDLLKNKLGFDEAFNYKE-EPDLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSASQG 270 (348)
T ss_pred HHHHHHHHhcCCCEEEECCC-cccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCCCCC
Confidence 9999997 799999998862 2367788888776689999999997 4789999999997 9999999754321 00
Q ss_pred ecc-hheeeeccEEEecccCCCCc--CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 297 AAH-YGLFLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 297 ~~~-~~~~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
... ...+.+++++.|+....+.. .+.+.++++++.+|++++. ++.+|+|+++++|++.+.+++.. |+||++.
T Consensus 271 ~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 271 IHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVGLFSGKNVGKQVIRVA 346 (348)
T ss_pred cccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHHHHcCCCCceEEEEec
Confidence 011 12234688888876543221 1346778999999998753 56789999999999999999888 9999875
No 74
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=4.3e-37 Score=262.05 Aligned_cols=311 Identities=23% Similarity=0.321 Sum_probs=247.7
Q ss_pred CcCCCCccceeeeEEEEecCCCC---eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEE
Q 017460 2 STSIKQPQVITCKAAVAWGAGQP---LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRI 67 (371)
Q Consensus 2 ~~~~~~~~~~~~~a~~~~~~~~~---l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~ 67 (371)
+.+..+ ++...|+++|++.|.| +++++.+.|+...++|+||.+|+.||++|+..++|.||. .+|+
T Consensus 10 ~ssa~q-~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~e 88 (354)
T KOG0025|consen 10 SSSASQ-MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGE 88 (354)
T ss_pred cccccc-cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEE
Confidence 334333 6777899999999987 888999999998888999999999999999999999875 4999
Q ss_pred EEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEe
Q 017460 68 VESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVV 147 (371)
Q Consensus 68 V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~ 147 (371)
|+.+|+++++|++||+|+.. ..+ .|+|++|.+.
T Consensus 89 Vv~vGs~vkgfk~Gd~VIp~-------------------------------~a~----------------lGtW~t~~v~ 121 (354)
T KOG0025|consen 89 VVAVGSNVKGFKPGDWVIPL-------------------------------SAN----------------LGTWRTEAVF 121 (354)
T ss_pred EEEecCCcCccCCCCeEeec-------------------------------CCC----------------CccceeeEee
Confidence 99999999999999999987 222 4699999999
Q ss_pred eCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 017460 148 HSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK 226 (371)
Q Consensus 148 ~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~ 226 (371)
+++.++++++.++++.||++....+|||++|...-++.+||+|+-+|+ +++|++.+|+|+++|+ +-+.+.|+....+.
T Consensus 122 ~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~iee 200 (354)
T KOG0025|consen 122 SESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEE 200 (354)
T ss_pred cccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHH
Confidence 999999999999999999999999999999988899999999999987 8999999999999999 66666676655544
Q ss_pred ----HHHcCCceEeCCCCCCchHHHHHHHH-hCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-Ceeecc
Q 017460 227 ----AKAFGVTEFLNPNDNNEPVQQVIKRI-TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH 299 (371)
Q Consensus 227 ----~~~lg~~~vi~~~~~~~~~~~~v~~~-~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~ 299 (371)
++.+||++||... +......+.. ... .+.+.|+|+|+. ...+..+.|..+ |.++.+|..... .+++.+
T Consensus 201 l~~~Lk~lGA~~ViTee---el~~~~~~k~~~~~~~prLalNcVGGk-sa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts 275 (354)
T KOG0025|consen 201 LKKQLKSLGATEVITEE---ELRDRKMKKFKGDNPRPRLALNCVGGK-SATEIARYLERG-GTMVTYGGMSKQPVTVPTS 275 (354)
T ss_pred HHHHHHHcCCceEecHH---HhcchhhhhhhccCCCceEEEeccCch-hHHHHHHHHhcC-ceEEEecCccCCCcccccc
Confidence 4679999999543 1111222222 223 789999999996 566778889998 999999987553 233333
Q ss_pred hheeeeccEEEecccCCCCcC--------CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee--eEEEeC
Q 017460 300 YGLFLSGRTLKGSLFGGWKPK--------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL--RSVIHM 369 (371)
Q Consensus 300 ~~~~~~~~~i~g~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~--kvvi~~ 369 (371)
+.. +++++++|+++..|... +.+.++.+++..|++...+. ...+|++...|++...+.... |-+|.+
T Consensus 276 ~lI-FKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~--e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 276 LLI-FKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNC--EKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred hhe-eccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccc--eeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 443 68999999999888753 23556788889999876643 456888888888865444332 555543
No 75
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=2.3e-36 Score=281.91 Aligned_cols=322 Identities=26% Similarity=0.409 Sum_probs=254.8
Q ss_pred EEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhc-CCC-------CC-----eEEEEEeeCCCCCCCCCCCE
Q 017460 17 VAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE-TQW-------PQ-----CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 17 ~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~-------~~-----~~G~V~~~G~~v~~~~~Gd~ 83 (371)
++++.++ +++.+.+.|.++++||+||+.++++|++|+..+. |.. +. ++|+|+++|++++.|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4666665 9999999999999999999999999999987763 321 11 69999999999999999999
Q ss_pred EEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh
Q 017460 84 VLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK 163 (371)
Q Consensus 84 V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~ 163 (371)
|++.+..+|++|.+|..|.++.|.+... .|.. . + .+...|+|++|++++++.++++|++++.++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-~-~------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~ 144 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF--LGSA-M-R------------FPHVQGGFREYLVVDASQCVPLPDGLSLRR 144 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc--eeec-c-c------------cCCCCCceeeEEEechHHeEECcCCCCHHH
Confidence 9999999999999999999999997432 1110 0 0 000125899999999999999999999999
Q ss_pred hhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 164 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
|+. ..+++++++++.+...+ ++++|||.|+|.+|++++|+|+++|+.+++++++++++.++++++|++++++++ ..
T Consensus 145 aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~--~~ 220 (339)
T cd08232 145 AAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLA--RD 220 (339)
T ss_pred hhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCC--ch
Confidence 876 46888999987555445 899999998899999999999999986789999999999999999999999876 32
Q ss_pred hHHHHHHHHh-CC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCC
Q 017460 244 PVQQVIKRIT-DG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKT 321 (371)
Q Consensus 244 ~~~~~v~~~~-~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~ 321 (371)
+ +..+. .. ++|+++|++++...++..+++++++ |+++.+|........+.... +.++.++.+.... ..
T Consensus 221 ~----~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~ 290 (339)
T cd08232 221 P----LAAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGGPVPLPLNAL-VAKELDLRGSFRF----DD 290 (339)
T ss_pred h----hhhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCccCcHHHH-hhcceEEEEEecC----HH
Confidence 3 22232 23 7999999999766788999999997 99999986442222222111 2356677665421 34
Q ss_pred CHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 322 DLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.+.++++++.++.+++.+.+.++|++++++++++.+.++... |+|+++
T Consensus 291 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 291 EFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 688889999999887666667899999999999999887766 998864
No 76
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=7.8e-37 Score=284.91 Aligned_cols=300 Identities=19% Similarity=0.227 Sum_probs=239.0
Q ss_pred eeeEEEEecCCC-CeEEEEeec----CCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------e--EEEEEeeCC
Q 017460 12 TCKAAVAWGAGQ-PLVVEEVEV----NPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------C--CRIVESVGP 73 (371)
Q Consensus 12 ~~~a~~~~~~~~-~l~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~--~G~V~~~G~ 73 (371)
-+|++....+.. .|++.+.+. |+|+++||||||+|++||+.|++.+.|.++ + + .|++..+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~ 86 (338)
T cd08295 7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS 86 (338)
T ss_pred EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence 455555444443 389988877 889999999999999999999998877421 1 2 356666788
Q ss_pred CCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeC-Cce
Q 017460 74 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCA 152 (371)
Q Consensus 74 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~~ 152 (371)
+++.|++||+|+.+ |+|+||+++++ ..+
T Consensus 87 ~v~~~~vGd~V~~~---------------------------------------------------g~~aey~~v~~~~~~ 115 (338)
T cd08295 87 GNPDFKVGDLVWGF---------------------------------------------------TGWEEYSLIPRGQDL 115 (338)
T ss_pred CCCCCCCCCEEEec---------------------------------------------------CCceeEEEecchhce
Confidence 88899999999854 37999999999 799
Q ss_pred EECC-CCCChh-hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 017460 153 VKVS-SIAPLE-KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 229 (371)
Q Consensus 153 ~~~P-~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 229 (371)
+++| +++++. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++++++
T Consensus 116 ~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~ 194 (338)
T cd08295 116 RKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKN 194 (338)
T ss_pred eecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 9995 678886 788899999999999877889999999999986 9999999999999999 89999999999999988
Q ss_pred -cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe------eecchhe
Q 017460 230 -FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE------VAAHYGL 302 (371)
Q Consensus 230 -lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~------~~~~~~~ 302 (371)
+|+++++++.+ ..++.+.+++.+++++|+|||++|+ ..+..++++++++ |+++.+|....... .++ ...
T Consensus 195 ~lGa~~vi~~~~-~~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~-~~~ 270 (338)
T cd08295 195 KLGFDDAFNYKE-EPDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNL-LNI 270 (338)
T ss_pred hcCCceeEEcCC-cccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCH-HHH
Confidence 99999998652 3467778887775699999999997 5789999999997 99999986543211 111 122
Q ss_pred eeeccEEEecccCCCCc--CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 303 FLSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 303 ~~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
+.++.++.++....+.. ...+.++++++.++++++. +...|+++++.+|++.+.+++.. |+|+++
T Consensus 271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence 24567777765433221 1236778889999988765 34679999999999999988877 999864
No 77
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=3.5e-36 Score=280.76 Aligned_cols=323 Identities=28% Similarity=0.401 Sum_probs=260.8
Q ss_pred EecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC--------CCC-----eEEEEEeeCCCCCCCCCCCEE
Q 017460 18 AWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--------WPQ-----CCRIVESVGPGVTEFNEGEHV 84 (371)
Q Consensus 18 ~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--------~~~-----~~G~V~~~G~~v~~~~~Gd~V 84 (371)
.++++.++++.+.|.|.++++||+||+.++++|++|+.++.+. ++. ++|+|+++|++++.+++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 4577888999999999999999999999999999998875432 111 699999999999999999999
Q ss_pred EeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhh
Q 017460 85 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 164 (371)
Q Consensus 85 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~a 164 (371)
++.++..|+.|..|..+..++|.+.+. .|+. . .|+|++|++++++.++++|++++..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~~~a 142 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI--FGVD-T------------------DGCFAEYAVVPAQNIWKNPKSIPPEYA 142 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce--Eeec-C------------------CCcceeEEEeehHHcEECcCCCChHhh
Confidence 999999999999999999999998743 2322 1 248999999999999999999998655
Q ss_pred hhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCch
Q 017460 165 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 244 (371)
Q Consensus 165 a~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 244 (371)
+ ++.++.++++++ .....+|++|+|.|+|++|++++|+|+++|++.|+++++++++.+.++++|++.++++. ..+
T Consensus 143 ~-~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~--~~~ 217 (340)
T TIGR00692 143 T-IQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPF--KED 217 (340)
T ss_pred h-hcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEccc--ccC
Confidence 4 556888998876 34578899999988899999999999999994488888888899999999998888876 567
Q ss_pred HHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCCH
Q 017460 245 VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDL 323 (371)
Q Consensus 245 ~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 323 (371)
+.+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|.......+++....+.++.++.+..... ....+
T Consensus 218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 294 (340)
T TIGR00692 218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRH--MFETW 294 (340)
T ss_pred HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEecCC--chhhH
Confidence 88888888876 9999999998766789999999997 99999987533222222222223456665544211 12457
Q ss_pred HHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCeeeEEEeC
Q 017460 324 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 369 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~kvvi~~ 369 (371)
.++++++.++++++.+++.+.|+++++.++++.+.++...|+++++
T Consensus 295 ~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 295 YTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred HHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 7889999999987655567999999999999998877644888764
No 78
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=6.1e-36 Score=277.91 Aligned_cols=313 Identities=26% Similarity=0.370 Sum_probs=256.8
Q ss_pred eeEEEEecCCC----CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCC
Q 017460 13 CKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEF 78 (371)
Q Consensus 13 ~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~ 78 (371)
|||+++++++. ++++.+.+.|.+.++||+||+.++++|++|++.+.|..+. ++|+|+++|++++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 78999988883 5888888888899999999999999999999988875431 599999999999999
Q ss_pred CCCCEEEeee-cCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 79 NEGEHVLTVF-IGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 79 ~~Gd~V~~~~-~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
++||+|++.+ ..+|+.|++|..+++++|...... |+. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~------------------g~~~~~~~~~~~~~~~lp~ 139 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT--GYT-VD------------------GGYAEYMVADERFAYPIPE 139 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc--ccc-cC------------------CceEEEEEecchhEEECCC
Confidence 9999998765 467999999999999999866542 221 12 4899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
+++..+++.+++++.+||+++ +.++++++++|||+|+|++|+++++++++.|+ +|+++++++++++.++++|++.+++
T Consensus 140 ~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 217 (329)
T cd08298 140 DYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGD 217 (329)
T ss_pred CCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEec
Confidence 999999999999999999998 88999999999999999999999999999999 9999999999999999999988887
Q ss_pred CCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 238 PNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
.+ .. .+.++|+++++.+....++.++++++++ |+++.+|.... .....+...+..+..+.++....
T Consensus 218 ~~--~~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~- 283 (329)
T cd08298 218 SD--DL---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT- 283 (329)
T ss_pred cC--cc---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC-
Confidence 64 21 2238999999877666899999999997 99999875321 11111222223456666554322
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
...+..+++++.++.+++ . .++|+++++.+|++.+.+++.. |+++
T Consensus 284 --~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 284 --RQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred --HHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 245788888898988765 2 4889999999999999988777 7663
No 79
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=5e-36 Score=278.43 Aligned_cols=297 Identities=21% Similarity=0.251 Sum_probs=235.8
Q ss_pred eeeEEEEecC--CCC----eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCC--CCC-----eEEEEEeeCCCCCCC
Q 017460 12 TCKAAVAWGA--GQP----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQ--WPQ-----CCRIVESVGPGVTEF 78 (371)
Q Consensus 12 ~~~a~~~~~~--~~~----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~--~~~-----~~G~V~~~G~~v~~~ 78 (371)
+|||+++.++ +.+ +++.+.+.|+|++|||+|||.+++||+.|.....+. .+. ++|+|++ .++.|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~~~~~p~v~G~e~~G~V~~---~~~~~ 78 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKRLNEGDTMIGTQVAKVIES---KNSKF 78 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccccCCCCCcEecceEEEEEec---CCCCC
Confidence 6899999873 332 889999999999999999999999998876533221 121 6999985 44679
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC---ceEEC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG---CAVKV 155 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~---~~~~~ 155 (371)
++||||+.. ++|++|+.++++ .++++
T Consensus 79 ~~Gd~V~~~---------------------------------------------------~~~~~~~~~~~~~~~~~~~i 107 (329)
T cd08294 79 PVGTIVVAS---------------------------------------------------FGWRTHTVSDGKDQPDLYKL 107 (329)
T ss_pred CCCCEEEee---------------------------------------------------CCeeeEEEECCccccceEEC
Confidence 999999864 268999999999 99999
Q ss_pred CCCCC-----hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 017460 156 SSIAP-----LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 229 (371)
Q Consensus 156 P~~~~-----~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 229 (371)
|++++ ...+++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+++|+ +|+++++++++++.+++
T Consensus 108 P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~ 186 (329)
T cd08294 108 PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKE 186 (329)
T ss_pred CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 99988 23334677899999999878889999999999985 9999999999999999 89999999999999999
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCC--ee---e-cchhee
Q 017460 230 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV---A-AHYGLF 303 (371)
Q Consensus 230 lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~--~~---~-~~~~~~ 303 (371)
+|++++++++ ..++.+.+++++++++|+|||++|+ ..+..++++++++ |+++.+|...... .. . +....+
T Consensus 187 ~Ga~~vi~~~--~~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~ 262 (329)
T cd08294 187 LGFDAVFNYK--TVSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQETII 262 (329)
T ss_pred cCCCEEEeCC--CccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccHHHHh
Confidence 9999999987 5678888888776689999999998 5789999999997 9999998532211 00 1 111223
Q ss_pred eeccEEEecccCCCCc--CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 304 LSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 304 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.+++++.++....+.. ...+.++++++.++++++.. ..+|+++++.+|++.+.+++.. |++|++
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 263 FKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYRE--HVTEGFENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred hhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCc--ccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 4577787765433210 12356788888999887653 3579999999999999988877 998864
No 80
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=4.7e-36 Score=278.20 Aligned_cols=311 Identities=27% Similarity=0.327 Sum_probs=249.8
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC----C-----CeEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW----P-----QCCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~-----~~~G~V~~~G~~v~~~~~Gd 82 (371)
|||+++..++ +.+++.+.+.|+++++||+||+.++++|++|+..+.+.. + .++|+|+++|++++.+++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVKKGD 80 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCCCCCCCeecccceeEEEEEECCCCCCCCCCC
Confidence 7899997766 458888888888999999999999999999988876532 1 16999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|++.+..+|+.|++|+.++.++|..... .|+. . .|+|++|++++++.++++|++++++
T Consensus 81 ~V~~~~~~~~~~c~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (325)
T cd08264 81 RVVVYNRVFDGTCDMCLSGNEMLCRNGGI--IGVV-S------------------NGGYAEYIVVPEKNLFKIPDSISDE 139 (325)
T ss_pred EEEECCCcCCCCChhhcCCCccccCccce--eecc-C------------------CCceeeEEEcCHHHceeCCCCCCHH
Confidence 99999989999999999999999986442 2221 1 2489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~ 241 (371)
+++.+++++.+||+++. ..+++++++|+|+|+ |++|++++++|+++|+ +|++++ +.+.++++|++++++.+
T Consensus 140 ~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~-- 211 (325)
T cd08264 140 LAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD-- 211 (325)
T ss_pred HhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch--
Confidence 99999999999999984 488999999999996 9999999999999999 888875 23677889998888764
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCCCcC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPK 320 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~ 320 (371)
+..+.+++++ +++|+|+|++|+ ..+..++++++++ |+++.+|.... ....++...+ .++.++.++..+. +
T Consensus 212 --~~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~ 282 (325)
T cd08264 212 --EVEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLTG-GEVKLDLSDLYSKQISIIGSTGGT---R 282 (325)
T ss_pred --HHHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCCC-CCCccCHHHHhhcCcEEEEccCCC---H
Confidence 2355666666 689999999997 4789999999997 99999986422 1122222222 3456676654432 3
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eE
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RS 365 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kv 365 (371)
+.+.++++++...+ + .++++|+++++++|++.+.++... |+
T Consensus 283 ~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 283 KELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 46778888885333 2 346899999999999998877655 43
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=1.4e-35 Score=275.57 Aligned_cols=318 Identities=27% Similarity=0.438 Sum_probs=258.2
Q ss_pred eEEEEecCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCCCCE
Q 017460 14 KAAVAWGAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNEGEH 83 (371)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~Gd~ 83 (371)
||+++++++..+++.+.|.|.+.+++++|++.++++|++|+..+.|.++. ++|+|+++|++++.+++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899998666999999999999999999999999999999888775321 59999999999999999999
Q ss_pred EEeeec-CCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 84 VLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 84 V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
|++.+. .+|+.|++|++++.++|.+....+ +. . .|+|++|+.++.++++++|++++..
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~~ 139 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNTG--YT-T------------------QGGYAEYMVADAEYTVLLPDGLPLA 139 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCccccC--cc-c------------------CCccccEEEEcHHHeEECCCCCCHH
Confidence 988665 679999999999999999854321 10 1 1489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 163 KICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
+++.+++.+.+||+++. ..++.++++|||+|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++.. .
T Consensus 140 ~~~~l~~~~~ta~~~l~-~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~ 215 (330)
T cd08245 140 QAAPLLCAGITVYSALR-DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSG--A 215 (330)
T ss_pred HhhhhhhhHHHHHHHHH-hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccC--C
Confidence 99999989999999884 4789999999999988899999999999999 899999999999999999998888764 2
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTD 322 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~ 322 (371)
...... ..+++|+++|+++....+..++++++++ |+++.++..............+.++.++.++..+. ...
T Consensus 216 ~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 287 (330)
T cd08245 216 ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGG---RAD 287 (330)
T ss_pred cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCCccccchHHHHhCCCEEEEeccCC---HHH
Confidence 233222 2247999999988767889999999997 99999986533211110111223466777765433 246
Q ss_pred HHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 323 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
+..+++++.++.+.+ . .+.|+++++.++|+.+.++... |+++
T Consensus 288 ~~~~~~ll~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 288 LQEALDFAAEGKVKP--M-IETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHHHcCCCcc--e-EEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 778888888888764 2 3789999999999999888777 7664
No 82
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=1.1e-35 Score=275.62 Aligned_cols=284 Identities=19% Similarity=0.244 Sum_probs=226.5
Q ss_pred eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC--CC-----eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCcc
Q 017460 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW--PQ-----CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 97 (371)
Q Consensus 25 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--~~-----~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~ 97 (371)
+++.+.|.|+|++|||+|||.|+++|+.+..-..+.. +. ++|+|++.|+ .|++||||+..
T Consensus 19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~---------- 85 (325)
T TIGR02825 19 FELKTVELPPLNNGEVLLEALFLSVDPYMRVAAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS---------- 85 (325)
T ss_pred eEEEeccCCCCCCCcEEEEEEEEecCHHHhcccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe----------
Confidence 8899999999999999999999999997654322111 11 6999999874 59999999875
Q ss_pred ccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEEC----CCCCChhhh-hhcchhhh
Q 017460 98 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV----SSIAPLEKI-CLLSCGLS 172 (371)
Q Consensus 98 c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~----P~~~~~~~a-a~~~~~~~ 172 (371)
++|++|+.++.+++.++ |++++++++ +++++++.
T Consensus 86 -----------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~ 124 (325)
T TIGR02825 86 -----------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGL 124 (325)
T ss_pred -----------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHH
Confidence 25899999999888887 999999987 67888999
Q ss_pred hHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHH
Q 017460 173 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 251 (371)
Q Consensus 173 ~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~ 251 (371)
|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.+.++++|++.++++++ ...+.+.++.
T Consensus 125 TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~-~~~~~~~~~~ 202 (325)
T TIGR02825 125 TAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT-VKSLEETLKK 202 (325)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc-cccHHHHHHH
Confidence 99999878889999999999985 9999999999999999 8999999999999999999999998862 2356666666
Q ss_pred HhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC---Ceee---cchheeeeccEEEecccCCCCc---CCC
Q 017460 252 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK---PEVA---AHYGLFLSGRTLKGSLFGGWKP---KTD 322 (371)
Q Consensus 252 ~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~~i~g~~~~~~~~---~~~ 322 (371)
.+++++|+|||++|+. .+..++++++++ |+++.+|..... ...+ .....+.++.++.++....+.. .+.
T Consensus 203 ~~~~gvdvv~d~~G~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 280 (325)
T TIGR02825 203 ASPDGYDCYFDNVGGE-FSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKA 280 (325)
T ss_pred hCCCCeEEEEECCCHH-HHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHH
Confidence 6555899999999975 679999999997 999999865321 0111 1112233567777765432211 135
Q ss_pred HHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 323 LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
+.++++++.++++++. +..+|+++++.+|++.+.+++.. |+|++
T Consensus 281 ~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 281 LKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence 7788999999998765 34679999999999999988877 88863
No 83
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=3.8e-35 Score=274.38 Aligned_cols=289 Identities=17% Similarity=0.222 Sum_probs=222.5
Q ss_pred eEEEEeecCCCC-CCcEEEEEeeecCCcchhhhhc---C-----CCCC-----eEEEEEeeCCCCCCCCCCCEEEeeecC
Q 017460 25 LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWE---T-----QWPQ-----CCRIVESVGPGVTEFNEGEHVLTVFIG 90 (371)
Q Consensus 25 l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~---g-----~~~~-----~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 90 (371)
+++.+.|.|++. ++||+|||.|+|||+.|..... | .++. ++|+|+++|++++.|++||+|+.+
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~--- 99 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF--- 99 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence 888999999874 9999999999999988853221 1 1111 699999999999999999999864
Q ss_pred CCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhh----hhh
Q 017460 91 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEK----ICL 166 (371)
Q Consensus 91 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~----aa~ 166 (371)
. ++|+||++++++.++++|+++++.+ ++.
T Consensus 100 ----------------------------~-------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~ 132 (345)
T cd08293 100 ----------------------------N-------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGA 132 (345)
T ss_pred ----------------------------C-------------------CCceeEEEecHHHeEEcCccccccchhHHhhh
Confidence 1 2699999999999999999864332 445
Q ss_pred cchhhhhHHhHhhhhcCCCCC--CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceEeCCCCCC
Q 017460 167 LSCGLSAGLGAAWNVADISKG--STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNN 242 (371)
Q Consensus 167 ~~~~~~~a~~~l~~~~~~~~~--~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vi~~~~~~ 242 (371)
++.++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+++|+.+|+++++++++++.+++ +|++++++++ .
T Consensus 133 ~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~--~ 210 (345)
T cd08293 133 VGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYK--T 210 (345)
T ss_pred cCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECC--C
Confidence 667899999998777788877 99999986 9999999999999998679999999999999876 9999999887 5
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-C--ee--ecch--heee--eccEEEecc
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-P--EV--AAHY--GLFL--SGRTLKGSL 313 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~--~~--~~~~--~~~~--~~~~i~g~~ 313 (371)
.++.+.+++++++++|+|||++|+. .+..++++++++ |+++.+|..... . .. .+.. ..+. ++.++..+.
T Consensus 211 ~~~~~~i~~~~~~gvd~vid~~g~~-~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (345)
T cd08293 211 DNVAERLRELCPEGVDVYFDNVGGE-ISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFL 288 (345)
T ss_pred CCHHHHHHHHCCCCceEEEECCCcH-HHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEE
Confidence 6788888888766999999999985 578999999997 999999853211 0 10 1100 1111 233333322
Q ss_pred cCCCCc--CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 314 FGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 314 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...+.. ...+.++++++.++++++. +...|+++++.+|++.+.+++.. |+++++
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 289 VLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred eeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 211111 1235667788899988765 33567999999999999988877 999874
No 84
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=6.9e-35 Score=273.14 Aligned_cols=313 Identities=26% Similarity=0.310 Sum_probs=247.8
Q ss_pred eeEEEEecCCCC--eEEEE-eecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-------------------------C-
Q 017460 13 CKAAVAWGAGQP--LVVEE-VEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-------------------------Q- 63 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-------------------------~- 63 (371)
|||+++.+++.+ +++.+ .+.|.+.+++|+|||.++++|++|+.++.|.++ .
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 788998876643 56654 477788999999999999999999988876431 1
Q ss_pred ----eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCcc
Q 017460 64 ----CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVS 139 (371)
Q Consensus 64 ----~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g 139 (371)
++|+|+++|++++.|++||+|++.+...|+.|..|. .|.. .|.. .+ |
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~~-----~~~~-~~------------------g 131 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DIDY-----IGSE-RD------------------G 131 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----cccc-----cCCC-CC------------------c
Confidence 699999999999999999999998888888876642 1211 1110 11 4
Q ss_pred ceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEc
Q 017460 140 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 218 (371)
Q Consensus 140 ~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~ 218 (371)
+|++|+.++.+.++++|+++++.+++.+++++.+|++++ +..++++|++|||+|+ |++|++++++|+++|+ ++++++
T Consensus 132 ~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~~ 209 (350)
T cd08274 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVA 209 (350)
T ss_pred cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEe
Confidence 899999999999999999999999999999999999987 7788999999999997 9999999999999999 788887
Q ss_pred CChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeee
Q 017460 219 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA 297 (371)
Q Consensus 219 ~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~ 297 (371)
+++ +++.++++|++.+++.. ...+. . ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|.... ....
T Consensus 210 ~~~-~~~~~~~~g~~~~~~~~--~~~~~-~-~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~ 281 (350)
T cd08274 210 GAA-KEEAVRALGADTVILRD--APLLA-D-AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIAG-PVVE 281 (350)
T ss_pred Cch-hhHHHHhcCCeEEEeCC--CccHH-H-HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccCC-cccc
Confidence 665 88888999997666553 22333 3 455666 99999999997 4789999999997 99999986533 1123
Q ss_pred cchhe-eeeccEEEecccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 298 AHYGL-FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 298 ~~~~~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
++... +.++.++.++.... ...+.++++++.++++.+ +++++|+++++.++|+.+..+... |+++.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 282 LDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 33222 34677888776532 346888999999998654 356889999999999999887776 888753
No 85
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=1.4e-34 Score=268.62 Aligned_cols=306 Identities=19% Similarity=0.233 Sum_probs=244.6
Q ss_pred eeeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCC
Q 017460 12 TCKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 12 ~~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~ 79 (371)
+|||+.+.+++.+ +++.+++.|.+.++||+||+.++++|++|+.+..|.++. ++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999887764 888899999999999999999999999999888775431 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+.. ..+ .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~-------------------------------~~~----------------~g~~~~~v~v~~~~~~~lp~~~ 113 (327)
T PRK10754 81 VGDRVVYA-------------------------------QSA----------------LGAYSSVHNVPADKAAILPDAI 113 (327)
T ss_pred CCCEEEEC-------------------------------CCC----------------CcceeeEEEcCHHHceeCCCCC
Confidence 99999854 111 1489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++++++.+++.+.+|+.++.+...+++|++|+|+| +|.+|++++++|+.+|+ +|+++++++++++.++++|++++++.
T Consensus 114 ~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (327)
T PRK10754 114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINY 192 (327)
T ss_pred CHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcC
Confidence 99999998889999999987778899999999997 59999999999999999 89999999999999999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-Ceeecchhe-----eeeccEEEe
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAHYGL-----FLSGRTLKG 311 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~~~~-----~~~~~~i~g 311 (371)
+ ..++.+.+++++++ ++|++||++++ ..+...+++++++ |+++.+|..... ..+...... +.....+.+
T Consensus 193 ~--~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (327)
T PRK10754 193 R--EENIVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQG 268 (327)
T ss_pred C--CCcHHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCCCCCCCcCHHHHhccCceEEecceeec
Confidence 6 56788888988887 99999999987 4788899999997 999999865421 112211111 001111111
Q ss_pred cccCCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 312 SLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.......-...+..+++++.++.+++..+..++|+++++.++++.+.++... |++|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 327 (327)
T PRK10754 269 YITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 1100000001244578888999887654446899999999999999888877 999863
No 86
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.3e-34 Score=265.99 Aligned_cols=320 Identities=25% Similarity=0.374 Sum_probs=259.3
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~~ 79 (371)
|||++++..+ +.+++.+.+.|.++++|++|++.++++|++|+....|.++. ++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7999998665 34888888888899999999999999999999988775431 5999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.....|+.+.+|....+. ..|.. . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~--------~~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~ 133 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEAS--------ALGGP-I------------------DGVLAEYVVLPEEGLVRAPDHL 133 (336)
T ss_pred CCCEEEEeccccccccccccccccc--------ccccc-c------------------CceeeeEEEecHHHeEECCCCC
Confidence 9999999877776655543222111 11111 1 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
+..+++.+++++.+|++++.+.+.+++|++|+|+|+|++|+++++++++.|+ +|++++.++++++.++++|++.+++.+
T Consensus 134 ~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 212 (336)
T cd08276 134 SFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYR 212 (336)
T ss_pred CHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCC
Confidence 9999999999999999998777889999999999889999999999999999 899999999999999999999888875
Q ss_pred CCC-chHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 240 DNN-EPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 240 ~~~-~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
. .++.+.+++++++ ++|++||+++. ..+..+++++++. |+++.+|..............+.++.++.++..+.
T Consensus 213 --~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (336)
T cd08276 213 --TTPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS- 287 (336)
T ss_pred --cccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc-
Confidence 3 5688888888887 99999999986 4788999999996 99999987544211111222235688888876543
Q ss_pred CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 318 KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...+.++++++.++.+.+. .++.|+++++.++++.+.++... |+++++
T Consensus 288 --~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 288 --RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred --HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 3468888888888776543 45889999999999999888776 888753
No 87
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=2.2e-34 Score=264.53 Aligned_cols=290 Identities=27% Similarity=0.409 Sum_probs=240.1
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C-----eEEEEEeeCCCCCCCCCC
Q 017460 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q-----CCRIVESVGPGVTEFNEG 81 (371)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~-----~~G~V~~~G~~v~~~~~G 81 (371)
|||++.++++ +.+++++++.|.+.+++|+||+.++++|++|.+...|.+. . ++|+|+.+|++++.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 6889987755 3499999999999999999999999999999988877541 1 699999999999999999
Q ss_pred CEEEeeec-CCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 82 EHVLTVFI-GECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 82 d~V~~~~~-~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
|+|++.+. .+|+.|++|.++..+.|..... .|.. . .|+|++|++++.+.++++|++++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------------~g~~~~~~~v~~~~~~~lp~~~~ 139 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG--IGTQ-A------------------DGGFAEYVLVPEESLHELPENLS 139 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce--eeec-C------------------CCceEEEEEcchHHeEECcCCCC
Confidence 99999874 7799999999999999986421 1211 1 24899999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEc--CChhhHHHHHHcCCceEeCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD--TNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~--~~~~~~~~~~~lg~~~vi~~ 238 (371)
+++++ +...++++++++...++++++++|||.|+|.+|++++++|++.|+ +|+++. +++++.+.++++|++++ ++
T Consensus 140 ~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~~ 216 (306)
T cd08258 140 LEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-NG 216 (306)
T ss_pred HHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-CC
Confidence 99887 556888999998888889999999998889999999999999999 787763 34567888899999877 77
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhe-eeeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL-FLSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~~i~g~~~~~ 316 (371)
+ ..++.+.+.+++++ ++|++||++|+...+...+++++++ |+++.+|.... ....++... +.+++++.|++++.
T Consensus 217 ~--~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~g~~~~~ 292 (306)
T cd08258 217 G--EEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGP-LAASIDVERIIQKELSVIGSRSST 292 (306)
T ss_pred C--cCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCC-CCcccCHHHHhhcCcEEEEEecCc
Confidence 6 56788888888876 9999999998766788999999997 99999998652 223333222 24799999998765
Q ss_pred CCcCCCHHHHHHHHHcC
Q 017460 317 WKPKTDLPSLVNRYLKK 333 (371)
Q Consensus 317 ~~~~~~~~~~~~~~~~~ 333 (371)
+++++++++++++|
T Consensus 293 ---~~~~~~~~~~~~~~ 306 (306)
T cd08258 293 ---PASWETALRLLASG 306 (306)
T ss_pred ---hHhHHHHHHHHhcC
Confidence 45788888887764
No 88
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=4.9e-34 Score=264.41 Aligned_cols=302 Identities=20% Similarity=0.237 Sum_probs=246.4
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC--------C-----eEEEEEeeCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP--------Q-----CCRIVESVGPGVTE 77 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~-----~~G~V~~~G~~v~~ 77 (371)
|||+++++++.+ +++.+.+.|.+.+++|+|++.++++|++|+....|..+ . ++|+|+++|++++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 789999876643 77777777888999999999999999999988877432 1 69999999999999
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
+++||+|++.... .. |+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~----------------------------~~------------------g~~~~~~~v~~~~~~~lp~ 114 (324)
T cd08244 81 AWLGRRVVAHTGR----------------------------AG------------------GGYAELAVADVDSLHPVPD 114 (324)
T ss_pred CCCCCEEEEccCC----------------------------CC------------------ceeeEEEEEchHHeEeCCC
Confidence 9999999986200 12 4899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
+++..+++.+++.+.+|+ ++.+..+++++++|+|+|+ |.+|++++++|+++|+ +|+++++++++.+.++++|++.++
T Consensus 115 ~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 192 (324)
T cd08244 115 GLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAV 192 (324)
T ss_pred CCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEE
Confidence 999999999999999995 5557888999999999985 9999999999999999 899999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEeccc
Q 017460 237 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLF 314 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~ 314 (371)
+++ +.++.+.+.+++++ ++|+++|++|+. ....+++++++. |+++.+|...... ..++. ..+.++.++.++..
T Consensus 193 ~~~--~~~~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~ 267 (324)
T cd08244 193 DYT--RPDWPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLLG 267 (324)
T ss_pred ecC--CccHHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEeec
Confidence 876 56778888888877 899999999986 578999999996 9999998764322 23331 22345778777655
Q ss_pred CCCCc---CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 315 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 315 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..... .+.+.++++++.++++.. ++++.|+++++.+|++.+.++... |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 268 VQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCceEEEeC
Confidence 43211 134666788888888654 356889999999999999988877 888764
No 89
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=2.1e-34 Score=268.89 Aligned_cols=302 Identities=24% Similarity=0.323 Sum_probs=245.8
Q ss_pred eeEEEEecCCCC---eEEEEeecCCCCC-CcEEEEEeeecCCcchhhhhcCCCC---------C------eEEEEEeeCC
Q 017460 13 CKAAVAWGAGQP---LVVEEVEVNPPQP-EEIRIKVVCTSLCRSDITAWETQWP---------Q------CCRIVESVGP 73 (371)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~---------~------~~G~V~~~G~ 73 (371)
|||+++.+++.+ +.+.+.|.|.+.+ ++|+||+.++++|++|+..+.|..+ + ++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 899999988875 8999999999887 9999999999999999988877531 1 6999999999
Q ss_pred CCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceE
Q 017460 74 GVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 153 (371)
Q Consensus 74 ~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~ 153 (371)
++..+++||+|++.. .+ .|+|++|+.++.+.++
T Consensus 81 ~v~~~~~Gd~V~~~~-------------------------------~~----------------~g~~~~~~~v~~~~~~ 113 (341)
T cd08290 81 GVKSLKPGDWVIPLR-------------------------------PG----------------LGTWRTHAVVPADDLI 113 (341)
T ss_pred CCCCCCCCCEEEecC-------------------------------CC----------------CccchheEeccHHHeE
Confidence 999999999999762 11 1489999999999999
Q ss_pred ECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh----hhHHHHH
Q 017460 154 KVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----EKCEKAK 228 (371)
Q Consensus 154 ~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~----~~~~~~~ 228 (371)
++|++++.++++.+++++.+|++++.....++++++|||+|+ |++|++++++|+++|+ +++++.+++ ++++.++
T Consensus 114 ~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~ 192 (341)
T cd08290 114 KVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERLK 192 (341)
T ss_pred eCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHHH
Confidence 999999999999999999999999877778999999999986 9999999999999999 888887765 6788889
Q ss_pred HcCCceEeCCCCCCc---hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heee
Q 017460 229 AFGVTEFLNPNDNNE---PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFL 304 (371)
Q Consensus 229 ~lg~~~vi~~~~~~~---~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~ 304 (371)
++|++++++++ .. .+.+.++.++++++|++||++|+. .+...+++++++ |+++.+|..... ...+.. ..+.
T Consensus 193 ~~g~~~~~~~~--~~~~~~~~~~i~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~ 267 (341)
T cd08290 193 ALGADHVLTEE--ELRSLLATELLKSAPGGRPKLALNCVGGK-SATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIF 267 (341)
T ss_pred hcCCCEEEeCc--ccccccHHHHHHHHcCCCceEEEECcCcH-hHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhh
Confidence 99999999875 33 677777777655899999999985 577889999997 999999864332 122222 2235
Q ss_pred eccEEEecccCCCCc--C-----CCHHHHHHHHHcCCCCCCcceeeee---cchhHHHHHHHHHcCCee-eEEEeC
Q 017460 305 SGRTLKGSLFGGWKP--K-----TDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 305 ~~~~i~g~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
++.++.+.....+.. + ..+..+++++.++.+.+. ...++ +++++.++++.+.++... |+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred CCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 688888776543221 0 246677888888887654 23556 999999999999888777 998864
No 90
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-33 Score=262.01 Aligned_cols=303 Identities=19% Similarity=0.300 Sum_probs=245.8
Q ss_pred eeeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCC
Q 017460 12 TCKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEF 78 (371)
Q Consensus 12 ~~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~ 78 (371)
||||+++.+.+. .+++.+.+.|.+.+++|+|||.++++|+.|+....|..+. ++|+|+++|++++.+
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 699999998775 3777788888899999999999999999999888764321 699999999999999
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
++||+|+.+. .+ |+|++|++++.+.++++|++
T Consensus 81 ~~Gd~V~~~~------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 81 KEGDRVMALL------------------------------PG------------------GGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred CCCCEEEEec------------------------------CC------------------CceeeEEEecHHHcEeCCCC
Confidence 9999998762 11 38999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
++..+++.+.+++.+|++++.+..++++|++|||+|+ |.+|++++++|+++|+ +++++++++++++.++++|++.+++
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILIR 191 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999999877788999999999985 9999999999999999 7777889999999999999988888
Q ss_pred CCCCCch-HHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeee-cchhee-eeccEEEecc
Q 017460 238 PNDNNEP-VQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA-AHYGLF-LSGRTLKGSL 313 (371)
Q Consensus 238 ~~~~~~~-~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~-~~~~~~-~~~~~i~g~~ 313 (371)
++ ..+ +.+.+++++++ ++|++||++++ ..+..++++++++ |+++.+|.... ..+. ++...+ .++.++.++.
T Consensus 192 ~~--~~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (334)
T PTZ00354 192 YP--DEEGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGG-AKVEKFNLLPLLRKRASIIFST 266 (334)
T ss_pred cC--ChhHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCC-CcccccCHHHHHhhCCEEEeee
Confidence 75 333 77888888877 99999999986 5788999999997 99999986433 2211 222222 2355777765
Q ss_pred cCCCCcC-------CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 314 FGGWKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 314 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
....... ..+.++++++.++.+.+. +.+.|+++++.++++.+.+++.. |+++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~ 329 (334)
T PTZ00354 267 LRSRSDEYKADLVASFEREVLPYMEEGEIKPI--VDRTYPLEEVAEAHTFLEQNKNIGKVVLTVN 329 (334)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 4331110 123567778888876543 56889999999999999887766 9998764
No 91
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=2.5e-34 Score=263.99 Aligned_cols=291 Identities=25% Similarity=0.348 Sum_probs=218.8
Q ss_pred eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC------eEEEEEeeCCCC------------CCCCCCCEEEe
Q 017460 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ------CCRIVESVGPGV------------TEFNEGEHVLT 86 (371)
Q Consensus 25 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------~~G~V~~~G~~v------------~~~~~Gd~V~~ 86 (371)
....+.++|.+++++++|++.++++|+.|+.+..|.+.+ +.|+|...|+++ ..+..||++..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 444678999999999999999999999999999886643 233343333333 33444444443
Q ss_pred eecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhh
Q 017460 87 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 166 (371)
Q Consensus 87 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~ 166 (371)
. .. .|+|+||.++++..++++|++++.++||+
T Consensus 100 ~-------------------------------~~-----------------~g~~aey~v~p~~~~~~~P~~l~~~~aa~ 131 (347)
T KOG1198|consen 100 F-------------------------------LS-----------------SGGLAEYVVVPEKLLVKIPESLSFEEAAA 131 (347)
T ss_pred c-------------------------------cC-----------------CCceeeEEEcchhhccCCCCccChhhhhc
Confidence 3 11 25899999999999999999999999999
Q ss_pred cchhhhhHHhHhhhhc------CCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 167 LSCGLSAGLGAAWNVA------DISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 167 ~~~~~~~a~~~l~~~~------~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
++.++.|||.++.+.+ +.++|++|||+|+ |++|++|+|+|++.|+ ..+++.+++++.++++++|+++++|++
T Consensus 132 ~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~ 210 (347)
T KOG1198|consen 132 LPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYK 210 (347)
T ss_pred CchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCC
Confidence 9999999999999888 8999999999975 8999999999999996 556666899999999999999999998
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-Ceeecc-hheeee-----ccEEEec
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-PEVAAH-YGLFLS-----GRTLKGS 312 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-~~~~~~-~~~~~~-----~~~i~g~ 312 (371)
++++.+.+++.++++||+||||+|+. .+...+.++..+ |+...++..... ...... .....+ ...+.+.
T Consensus 211 --~~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (347)
T KOG1198|consen 211 --DENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGV 286 (347)
T ss_pred --CHHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeecc
Confidence 68999999998844999999999985 567778888886 764444433221 111111 000000 1111111
Q ss_pred cc---CCCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 313 LF---GGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 313 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
.+ ......+.+..+.+++.++++ ++.+.++||++++.+|++.+..+... |+++++.
T Consensus 287 ~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 287 NYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD 346 (347)
T ss_pred ceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence 10 011113457788999999965 44578999999999999999887777 9999875
No 92
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=9.5e-34 Score=263.95 Aligned_cols=299 Identities=16% Similarity=0.186 Sum_probs=233.8
Q ss_pred eEEEEecC---CCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCC
Q 017460 14 KAAVAWGA---GQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEF 78 (371)
Q Consensus 14 ~a~~~~~~---~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~ 78 (371)
||+++.++ +.+ +++.++|.|+++++||+|||+++++|++|+.++.|..+. ++|+|+++|++++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 57777775 433 888889999999999999999999999999888765421 699999999999999
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
++||+|+.... .. . .|+|++|++++++.++++|++
T Consensus 81 ~~Gd~V~~~~~--------------------------~~-~------------------~g~~~~~~~v~~~~~~~ip~~ 115 (336)
T TIGR02817 81 KPGDEVWYAGD--------------------------ID-R------------------PGSNAEFHLVDERIVGHKPKS 115 (336)
T ss_pred CCCCEEEEcCC--------------------------CC-C------------------CCcccceEEEcHHHcccCCCC
Confidence 99999987510 00 1 248999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCC-----CCEEEEEcc-ChHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFG 231 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~VlI~Ga-g~~G~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg 231 (371)
+++++++.+++++.+||+++.+..++++ |++|||+|+ |++|++++|+|+++ |+ +|+++++++++.+.++++|
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g 194 (336)
T TIGR02817 116 LSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELG 194 (336)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcC
Confidence 9999999999999999999877788877 999999985 99999999999998 99 9999999999999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEe
Q 017460 232 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKG 311 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g 311 (371)
+++++++. . ++...+++..++++|+|+|++++...+...+++++++ |+++.++.. ..++..... .++.++..
T Consensus 195 ~~~~~~~~--~-~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~~~~~~-~~~~~~~~ 266 (336)
T TIGR02817 195 AHHVIDHS--K-PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELDISPFK-RKSISLHW 266 (336)
T ss_pred CCEEEECC--C-CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---ccccchhhh-hcceEEEE
Confidence 99999864 2 5777777754448999999987656789999999997 999988532 122222111 12344443
Q ss_pred cccC--CCCcC-------CCHHHHHHHHHcCCCCCCcceeeee---cchhHHHHHHHHHcCCee-eEEEe
Q 017460 312 SLFG--GWKPK-------TDLPSLVNRYLKKEFMVDEFITHNL---LFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 312 ~~~~--~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
..+. ....+ ..+.++++++.++.+++. +++.+ +++++.+|++.+.+++.. |++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 267 EFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred EEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 2221 10000 236778888889887643 23444 579999999999988777 87764
No 93
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1e-33 Score=262.99 Aligned_cols=301 Identities=24% Similarity=0.312 Sum_probs=243.4
Q ss_pred eeeEEEEecCCC----CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----------CeEEEEEeeCCCCC
Q 017460 12 TCKAAVAWGAGQ----PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----------QCCRIVESVGPGVT 76 (371)
Q Consensus 12 ~~~a~~~~~~~~----~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~G~V~~~G~~v~ 76 (371)
.|||+++.+++. ++++++++.|.+.++||+||+.++++|++|+....|.++ .++|+|+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999988765 489999999999999999999999999999988876532 16999999999999
Q ss_pred CCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECC
Q 017460 77 EFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVS 156 (371)
Q Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P 156 (371)
.+++||+|++. .. |+|++|+.++.+.++++|
T Consensus 81 ~~~~Gd~V~~~-------------------------------~~------------------g~~~s~~~v~~~~~~~ip 111 (329)
T cd08250 81 DFKVGDAVATM-------------------------------SF------------------GAFAEYQVVPARHAVPVP 111 (329)
T ss_pred CCCCCCEEEEe-------------------------------cC------------------cceeEEEEechHHeEECC
Confidence 99999999986 22 379999999999999999
Q ss_pred CCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 157 SIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 157 ~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
++. .+++.+++++.+||+++.+..+++++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+
T Consensus 112 ~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 188 (329)
T cd08250 112 ELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRP 188 (329)
T ss_pred CCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceE
Confidence 973 4667788899999999877788999999999985 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCC---------eeecchheeeec
Q 017460 236 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP---------EVAAHYGLFLSG 306 (371)
Q Consensus 236 i~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~---------~~~~~~~~~~~~ 306 (371)
++.+ ..++.+.+....++++|++||++|+ ..+..++++++++ |+++.+|...... ...+....+.++
T Consensus 189 ~~~~--~~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd08250 189 INYK--TEDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKS 264 (329)
T ss_pred EeCC--CccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhcC
Confidence 8765 4566667766654589999999997 5789999999996 9999998654310 011222333457
Q ss_pred cEEEecccCCCC--cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 307 RTLKGSLFGGWK--PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 307 ~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.++.++.+..+. ....+.++++++.++.+.+.....+.|+++++++|++.+.+++.. |++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 265 ASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred ceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence 888777543221 123467788888888876643334679999999999999988777 88764
No 94
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=5.4e-33 Score=257.52 Aligned_cols=301 Identities=19% Similarity=0.214 Sum_probs=233.2
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~ 79 (371)
|||++++++++ ++++.+.|.|.+++++|+||+.++++|++|+..+.|.++ + ++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 79999999886 699999999999999999999999999999999887643 1 69999998 456899
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+.... ..|+. .+ |+|++|+.++++.++++|+++
T Consensus 79 ~Gd~V~~~~~-----------------------~~g~~-~~------------------g~~~~~~~v~~~~~~~lp~~~ 116 (325)
T cd05280 79 EGDEVLVTGY-----------------------DLGMN-TD------------------GGFAEYVRVPADWVVPLPEGL 116 (325)
T ss_pred CCCEEEEccc-----------------------ccCCC-CC------------------ceeEEEEEEchhhEEECCCCC
Confidence 9999998621 01211 12 489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhc--CCC-CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVA--DIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~--~~~-~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
++++++.+++.+.+++.++.... ++. .+++|+|+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++++
T Consensus 117 ~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 195 (325)
T cd05280 117 SLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASEV 195 (325)
T ss_pred CHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEE
Confidence 99999999999999999874433 335 3579999997 9999999999999999 89999999999999999999988
Q ss_pred eCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecc
Q 017460 236 LNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSL 313 (371)
Q Consensus 236 i~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~ 313 (371)
++.+ .. ...+.+...+ ++|+|||++++ ..+..+++++++. |+++.+|...... ..+....+ .++.++.+..
T Consensus 196 ~~~~--~~--~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~ 268 (325)
T cd05280 196 LDRE--DL--LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGPE-LTTTVLPFILRGVSLLGID 268 (325)
T ss_pred Ecch--hH--HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCCc-cccccchheeeeeEEEEEE
Confidence 8764 21 2233344444 89999999998 4789999999997 9999998764321 12232222 4688888766
Q ss_pred cCCCCcCCCH----HHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 314 FGGWKPKTDL----PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 314 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
...... ... ..+.+++..+. .+.+..+|++++++++++.+.+++.. |+++++
T Consensus 269 ~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 269 SVNCPM-ELRKQVWQKLATEWKPDL---LEIVVREISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred eecCch-hHHHHHHHHHHHHHhcCC---ccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 543221 122 22333333442 22356899999999999999988877 988864
No 95
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.9e-33 Score=257.06 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=234.4
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC------eEEEEEeeCCCCCCCCCCCEEE
Q 017460 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ------CCRIVESVGPGVTEFNEGEHVL 85 (371)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~------~~G~V~~~G~~v~~~~~Gd~V~ 85 (371)
|||+++.+.+ ..+++.+.+.|.+.++||+||+.++++|+.|++...+...+ ++|+|+++|++++.|++||+|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~ 80 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERPDGAVPGWDAAGVVERAAADGSGPAVGARVV 80 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCCCCCcccceeEEEEEEeCCCCCCCCCCCEEE
Confidence 6899997754 12667788899999999999999999999998876533221 6999999999999999999998
Q ss_pred eeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhh
Q 017460 86 TVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKIC 165 (371)
Q Consensus 86 ~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa 165 (371)
... .. |+|++|+.++.+.++++|+++++++++
T Consensus 81 ~~~------------------------------~~------------------g~~~~~~~v~~~~~~~ip~~~~~~~a~ 112 (305)
T cd08270 81 GLG------------------------------AM------------------GAWAELVAVPTGWLAVLPDGVSFAQAA 112 (305)
T ss_pred Eec------------------------------CC------------------cceeeEEEEchHHeEECCCCCCHHHHH
Confidence 761 12 389999999999999999999999999
Q ss_pred hcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCch
Q 017460 166 LLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEP 244 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~ 244 (371)
.+++.+.+||+++...... +|++|+|+|+ |.+|++++++|++.|+ +|+.+++++++.+.++++|++.++... .
T Consensus 113 ~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~-- 186 (305)
T cd08270 113 TLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG--S-- 186 (305)
T ss_pred HhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc--c--
Confidence 9999999999998555444 5999999987 9999999999999999 899999999999999999987665432 1
Q ss_pred HHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheee---eccEEEecccCC-CCcC
Q 017460 245 VQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL---SGRTLKGSLFGG-WKPK 320 (371)
Q Consensus 245 ~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~---~~~~i~g~~~~~-~~~~ 320 (371)
++.++++|+++|++|+. .+..++++++.+ |+++.+|.... ....++...+. ++.++.++.+.. ....
T Consensus 187 ------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (305)
T cd08270 187 ------ELSGAPVDLVVDSVGGP-QLARALELLAPG-GTVVSVGSSSG-EPAVFNPAAFVGGGGGRRLYTFFLYDGEPLA 257 (305)
T ss_pred ------cccCCCceEEEECCCcH-HHHHHHHHhcCC-CEEEEEeccCC-CcccccHHHHhcccccceEEEEEccCHHHHH
Confidence 12234799999999985 789999999997 99999986542 22223332222 377787776542 1112
Q ss_pred CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 321 TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..+..+++++.++++++. +.+++++++++++++.+.++... |+++.+
T Consensus 258 ~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 258 ADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 457778889999998754 56899999999999999888877 988864
No 96
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=2.6e-33 Score=261.22 Aligned_cols=306 Identities=25% Similarity=0.337 Sum_probs=240.0
Q ss_pred eeEEEEecCC-CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC----CC-----eEEEEEeeCCCCCCCCCCC
Q 017460 13 CKAAVAWGAG-QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW----PQ-----CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 13 ~~a~~~~~~~-~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~----~~-----~~G~V~~~G~~v~~~~~Gd 82 (371)
|||++++.++ ..+++.+.+.|+++++||+||+.++++|++|+....+.+ +. ++|+|+.+|++++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFIPSYPAILGCDFAGTVVEVGSGVTRFKVGD 80 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccccCCCceeeeeeeEEEEEeCCCcCcCCCCC
Confidence 7899999884 338889999999999999999999999999998875443 11 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLE 162 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~ 162 (371)
+|+..+...|+ |.. . .|+|++|++++.+.++++|++++++
T Consensus 81 ~V~~~~~~~~~---------------------~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~ 120 (339)
T cd08249 81 RVAGFVHGGNP---------------------NDP-R------------------NGAFQEYVVADADLTAKIPDNISFE 120 (339)
T ss_pred EEEEEeccccC---------------------CCC-C------------------CCcccceEEechhheEECCCCCCHH
Confidence 99987533221 000 1 2489999999999999999999999
Q ss_pred hhhhcchhhhhHHhHhhhhcCC----------CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC
Q 017460 163 KICLLSCGLSAGLGAAWNVADI----------SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG 231 (371)
Q Consensus 163 ~aa~~~~~~~~a~~~l~~~~~~----------~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg 231 (371)
+++.+++++.+||+++.+..++ .++++|||+|+ |.+|++++++|+++|+ +|+++. ++++++.++++|
T Consensus 121 ~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~~g 198 (339)
T cd08249 121 EAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKSLG 198 (339)
T ss_pred HceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHhcC
Confidence 9999999999999998655544 78999999996 8999999999999999 888876 568999999999
Q ss_pred CceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhcc--CCceEEEecCCCCCCeeecchheeeeccEE
Q 017460 232 VTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCD--GWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 309 (371)
Q Consensus 232 ~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~--~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 309 (371)
++++++++ ..++.+.+++++++++|++||++|+...+..+++++++ + |+++.+|...... .+.... ....+
T Consensus 199 ~~~v~~~~--~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~~~~--~~~~~~--~~~~~ 271 (339)
T cd08249 199 ADAVFDYH--DPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVPEET--EPRKGV--KVKFV 271 (339)
T ss_pred CCEEEECC--CchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCCccc--cCCCCc--eEEEE
Confidence 99999886 56788888887766899999999975578999999999 8 9999998664322 111111 11111
Q ss_pred EecccCC------CCcCCCHHHHHHHHHcCCCCCCcceeeeec--chhHHHHHHHHHcCC-ee-eEEEeC
Q 017460 310 KGSLFGG------WKPKTDLPSLVNRYLKKEFMVDEFITHNLL--FEDINQAFNLMKEGK-CL-RSVIHM 369 (371)
Q Consensus 310 ~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~a~~~~~~~~-~~-kvvi~~ 369 (371)
....+.. ......+..+++++.++++.+.+. ..++ ++++.+||+.+..++ .. |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 272 LGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV--RVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred EeeeecccccccccchHHHHHHHHHHHHcCCccCCCc--eecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 1111110 000134667888888998876533 5566 999999999999888 66 999864
No 97
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=6e-33 Score=256.98 Aligned_cols=288 Identities=20% Similarity=0.307 Sum_probs=239.8
Q ss_pred eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----------CeEEEEEeeCCCCCCCCCCCEEEeeecCCCC
Q 017460 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----------QCCRIVESVGPGVTEFNEGEHVLTVFIGECK 93 (371)
Q Consensus 25 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~ 93 (371)
+++.+.+.|.+.+++|+||+.++++|+.|..++.|.+. .++|+|+.+|++++.+++||+|++.+
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----- 88 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----- 88 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC-----
Confidence 66677888889999999999999999999988876542 16999999999999999999999862
Q ss_pred CCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhhh
Q 017460 94 TCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSA 173 (371)
Q Consensus 94 ~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~ 173 (371)
.. |+|++|+.++...++++|++++..+++.+++.+.+
T Consensus 89 -------------------------~~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~t 125 (323)
T cd05282 89 -------------------------GE------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLT 125 (323)
T ss_pred -------------------------CC------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHH
Confidence 02 37999999999999999999999999999889999
Q ss_pred HHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHH
Q 017460 174 GLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 174 a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~ 252 (371)
|++++.+...+.++++|||+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++.+++++ ...+...+.++
T Consensus 126 a~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~ 202 (323)
T cd05282 126 AWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSS--PEDLAQRVKEA 202 (323)
T ss_pred HHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEeccc--chhHHHHHHHH
Confidence 9999877778899999999986 8999999999999999 899999999999999999999999886 55788888888
Q ss_pred hCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheee-eccEEEecccCCCCc-------CCCH
Q 017460 253 TDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFL-SGRTLKGSLFGGWKP-------KTDL 323 (371)
Q Consensus 253 ~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~-------~~~~ 323 (371)
+++ ++|++||++|+. .....+++++++ |+++.+|..... ...++...+. ++.++.+.....+.. ...+
T Consensus 203 ~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (323)
T cd05282 203 TGGAGARLALDAVGGE-SATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETF 279 (323)
T ss_pred hcCCCceEEEECCCCH-HHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHH
Confidence 887 999999999985 567889999996 999999876442 2233333333 678888776554321 1246
Q ss_pred HHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 324 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.++++++.++.+.+. ++++|+++++.++|+.+.++... |++++
T Consensus 280 ~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 323 (323)
T cd05282 280 AEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPGRGGKVLLT 323 (323)
T ss_pred HHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCCCCceEeeC
Confidence 677888888887643 46889999999999999888776 87763
No 98
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.8e-32 Score=251.25 Aligned_cols=291 Identities=25% Similarity=0.390 Sum_probs=234.3
Q ss_pred cCCCCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhh-cCCC----C--C------eEEEEEeeCCCCCCCCCCCEEEe
Q 017460 20 GAGQPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAW-ETQW----P--Q------CCRIVESVGPGVTEFNEGEHVLT 86 (371)
Q Consensus 20 ~~~~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~----~--~------~~G~V~~~G~~v~~~~~Gd~V~~ 86 (371)
+.++ +++.+++.|++.++||+||+.++++|++|+..+ .|.. + + ++|+|+++|++++.+++||+|+.
T Consensus 3 ~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~ 81 (312)
T cd08269 3 GPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG 81 (312)
T ss_pred CCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence 4444 999999999999999999999999999999887 6643 1 1 59999999999999999999998
Q ss_pred eecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhh
Q 017460 87 VFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICL 166 (371)
Q Consensus 87 ~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~ 166 (371)
. .. |+|++|+.++++.++++|+++ ..++.
T Consensus 82 ~-------------------------------~~------------------g~~~~~~~v~~~~~~~lP~~~--~~~~~ 110 (312)
T cd08269 82 L-------------------------------SG------------------GAFAEYDLADADHAVPLPSLL--DGQAF 110 (312)
T ss_pred e-------------------------------cC------------------CcceeeEEEchhheEECCCch--hhhHH
Confidence 6 22 379999999999999999998 23333
Q ss_pred cchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHH
Q 017460 167 LSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQ 246 (371)
Q Consensus 167 ~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~ 246 (371)
...+++++++++. .++++++++|||+|+|.+|++++++|+++|++.|+++.+++++.++++++|++.+++.+ ...+.
T Consensus 111 ~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~ 187 (312)
T cd08269 111 PGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD--SEAIV 187 (312)
T ss_pred hhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC--CcCHH
Confidence 2257889999874 88899999999998899999999999999993399999999999999999998888865 56788
Q ss_pred HHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecch-heeeeccEEEecccCCCC-cCCCH
Q 017460 247 QVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY-GLFLSGRTLKGSLFGGWK-PKTDL 323 (371)
Q Consensus 247 ~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~-~~~~~ 323 (371)
+.+.+++++ ++|+++|++|....+..++++++++ |+++.+|.... ....++. ....++.++.++...... ....+
T Consensus 188 ~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (312)
T cd08269 188 ERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQD-GPRPVPFQTWNWKGIDLINAVERDPRIGLEGM 265 (312)
T ss_pred HHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCC-CCcccCHHHHhhcCCEEEEecccCccchhhHH
Confidence 889888887 9999999998766789999999997 99999986542 2222222 122356666655432211 12568
Q ss_pred HHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCe--eeEEE
Q 017460 324 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKC--LRSVI 367 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~--~kvvi 367 (371)
.++++++.++.+.+...++++|+++++.++++.+.+++. .|+++
T Consensus 266 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 266 REAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 889999999988765445688999999999999988864 38876
No 99
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=5.2e-33 Score=239.55 Aligned_cols=285 Identities=20% Similarity=0.249 Sum_probs=230.3
Q ss_pred eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC--------------eEEEEEeeCCCCCCCCCCCEEEeeecC
Q 017460 25 LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ--------------CCRIVESVGPGVTEFNEGEHVLTVFIG 90 (371)
Q Consensus 25 l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~--------------~~G~V~~~G~~v~~~~~Gd~V~~~~~~ 90 (371)
|++++.+.|+|+++|||+|++|.++++. ++.+-...+. .+|+|++ |+...|++||.|+...
T Consensus 27 F~lee~~vp~p~~GqvLl~~~ylS~DPy-mRgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~--S~~~~f~~GD~V~~~~-- 101 (340)
T COG2130 27 FRLEEVDVPEPGEGQVLLRTLYLSLDPY-MRGRMSDAPSYAPPVELGEVMVGGTVAKVVA--SNHPGFQPGDIVVGVS-- 101 (340)
T ss_pred ceeEeccCCCCCcCceEEEEEEeccCHH-HeecccCCcccCCCcCCCceeECCeeEEEEe--cCCCCCCCCCEEEecc--
Confidence 9999999999999999999999999973 2222222211 3777777 6778899999999762
Q ss_pred CCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC---CChhhhhhc
Q 017460 91 ECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI---APLEKICLL 167 (371)
Q Consensus 91 ~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~---~~~~~aa~~ 167 (371)
+|++|..++.+.+.|++.+ ++... ..+
T Consensus 102 -------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~L-gvL 131 (340)
T COG2130 102 -------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYL-GVL 131 (340)
T ss_pred -------------------------------------------------cceEEEeechhhceecCCCCCCcchHH-hhc
Confidence 6999999999999999755 23222 234
Q ss_pred chhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceEeCCCCCCchH
Q 017460 168 SCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPV 245 (371)
Q Consensus 168 ~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~ 245 (371)
..+..|||.+|.+.+++++|++|+|-|| |++|..+.|+||..|+ +|+.+..+++|.+++.+ +|.+..+|++ .+++
T Consensus 132 GmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk--~~d~ 208 (340)
T COG2130 132 GMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYK--AEDF 208 (340)
T ss_pred CCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecC--cccH
Confidence 5588999999999999999999999985 9999999999999999 99999999999999977 9999999999 6799
Q ss_pred HHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC--Ceeecch----heeeeccEEEecccCC-CC
Q 017460 246 QQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK--PEVAAHY----GLFLSGRTLKGSLFGG-WK 318 (371)
Q Consensus 246 ~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~--~~~~~~~----~~~~~~~~i~g~~~~~-~~ 318 (371)
.+.+.+.+..|+|+.||++|++ .++..+..|+.. +|++.||..+.. ...+..+ ..+.+.+++.|+-... +.
T Consensus 209 ~~~L~~a~P~GIDvyfeNVGg~-v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~ 286 (340)
T COG2130 209 AQALKEACPKGIDVYFENVGGE-VLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYD 286 (340)
T ss_pred HHHHHHHCCCCeEEEEEcCCch-HHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhh
Confidence 9999999999999999999995 899999999995 999999975432 1111111 1112367888886633 22
Q ss_pred cC--CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCCC
Q 017460 319 PK--TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMPK 371 (371)
Q Consensus 319 ~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~~ 371 (371)
.+ +..+++..|+.+|+++.++. -+=.||++++||.-|.+++.+ |+|+++.+
T Consensus 287 ~~~~e~~~~l~~wv~~GKi~~~et--i~dGlEnaP~Af~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 287 QRFPEALRELGGWVKEGKIQYRET--IVDGLENAPEAFIGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred hhhHHHHHHHHHHHHcCceeeEee--ehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence 21 34567888999999998863 345899999999999999988 99998753
No 100
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=4.1e-32 Score=250.86 Aligned_cols=301 Identities=23% Similarity=0.307 Sum_probs=239.1
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC----------eEEEEEeeCCCCCCCCC
Q 017460 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ----------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----------~~G~V~~~G~~v~~~~~ 80 (371)
||++++...+. .+++.+.+.|.++++||+||+.++++|++|+..+.|..+. ++|+|+++|. ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 68899977664 3677788888889999999999999999999988775421 6999999995 57999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|+++.... |.. . .|+|++|+.+++..++++|++++
T Consensus 79 Gd~V~~~~~~~-----------------------~~~-~------------------~g~~~~~~~~~~~~~~~ip~~~~ 116 (320)
T cd08243 79 GQRVATAMGGM-----------------------GRT-F------------------DGSYAEYTLVPNEQVYAIDSDLS 116 (320)
T ss_pred CCEEEEecCCC-----------------------CCC-C------------------CcccceEEEcCHHHcEeCCCCCC
Confidence 99999873100 000 1 14899999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
.++++.+++++.+|++++.+...+++|++|||+|+ |.+|++++++|++.|+ +|+++++++++++.++++|++++++.
T Consensus 117 ~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~- 194 (320)
T cd08243 117 WAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID- 194 (320)
T ss_pred HHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec-
Confidence 99999999999999999877778999999999986 9999999999999999 89999999999999999999887754
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCee----ecchheeeeccEEEecccC
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEV----AAHYGLFLSGRTLKGSLFG 315 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~----~~~~~~~~~~~~i~g~~~~ 315 (371)
..++.+.++++ +.++|+++|++++ ..+..++++++++ |+++.+|........ ......+.+++++.++...
T Consensus 195 --~~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (320)
T cd08243 195 --DGAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSG 269 (320)
T ss_pred --CccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecchh
Confidence 33677778877 4499999999997 4789999999996 999999864322111 1111112346677666543
Q ss_pred CCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 316 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
... ...+..+++++.++.+.+. .++.|+++++.+|++.+.++... |+++
T Consensus 270 ~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 270 DVP-QTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred hhh-HHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence 221 2346778888888887653 45889999999999999888776 7775
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=6e-32 Score=250.73 Aligned_cols=304 Identities=17% Similarity=0.194 Sum_probs=230.0
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhc--CCC----CC-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWE--TQW----PQ-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~--g~~----~~-----~~G~V~~~G~~v~~~~ 79 (371)
|||+++.+++.+ +++++.|.|.+.++||+||+.++++|++|..... +.. +. ++|+|++.| ++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 799999887764 8889999999999999999999999999986654 221 11 699999954 56799
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+..++. .|.. . .|+|++|+.++++.++++|+++
T Consensus 79 ~Gd~V~~~~~~-----------------------~~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~ 116 (326)
T cd08289 79 PGDEVIVTSYD-----------------------LGVS-H------------------HGGYSEYARVPAEWVVPLPKGL 116 (326)
T ss_pred CCCEEEEcccc-----------------------cCCC-C------------------CCcceeEEEEcHHHeEECCCCC
Confidence 99999986320 1110 1 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhh--cC-CCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 160 PLEKICLLSCGLSAGLGAAWNV--AD-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~--~~-~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
++++++.+++.+.+|+.++... .. ...+++|||+|+ |.+|++++++|+++|+ +|+++++++++++.++++|++.+
T Consensus 117 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v 195 (326)
T cd08289 117 TLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEV 195 (326)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEE
Confidence 9999999999999998886432 23 344789999987 9999999999999999 89999999999999999999888
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEeccc
Q 017460 236 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 314 (371)
++.+ +. ..+.+++++++++|+|||++|+ ..+..++++++++ |+++.+|.... ...+.....+ .++.++.++..
T Consensus 196 ~~~~--~~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 196 IPRE--EL-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred Ecch--hH-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEEe
Confidence 8875 32 3455666654489999999998 5789999999996 99999987633 2222222222 46888887643
Q ss_pred CCCCcCCCHHHHHHHHHcCCCC---CCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 315 GGWKPKTDLPSLVNRYLKKEFM---VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.... ......++..+.. .+. ....++++|+++++.+||+.+.+++.. |+++++
T Consensus 270 ~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 270 VECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 2110 1122333333332 222 122357899999999999999988887 888764
No 102
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=8.6e-32 Score=249.40 Aligned_cols=301 Identities=19% Similarity=0.210 Sum_probs=231.4
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCCCCCC
Q 017460 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~~~~~ 80 (371)
||++++..+.+ +++++.|.|.+.+++|+||+.++++|++|+..+.|.++ . ++|+|+. ++++.|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 68888777764 68899999999999999999999999999998887541 1 6999988 56778999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|++..+. .|.. . .|+|++|+.++++.++++|++++
T Consensus 79 Gd~V~~~~~~-----------------------~~~~-~------------------~g~~~~~~~~~~~~~~~iP~~~~ 116 (323)
T TIGR02823 79 GDEVIVTGYG-----------------------LGVS-H------------------DGGYSQYARVPADWLVPLPEGLS 116 (323)
T ss_pred CCEEEEccCC-----------------------CCCC-C------------------CccceEEEEEchhheEECCCCCC
Confidence 9999976311 0110 1 24899999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhh--hhcCCCCCC-EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 161 LEKICLLSCGLSAGLGAAW--NVADISKGS-TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~--~~~~~~~~~-~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
.++++.+++.+.+|+.++. ....+.+++ +|||+|+ |.+|++++++|+++|+ +++++++++++++.++++|++.++
T Consensus 117 ~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~ 195 (323)
T TIGR02823 117 LREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEVI 195 (323)
T ss_pred HHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEEE
Confidence 9999999989999987763 234488898 9999996 9999999999999999 888888889999999999998888
Q ss_pred CCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccC
Q 017460 237 NPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~ 315 (371)
+.+ +... .++.+.++++|+++|++|+. .+..++++++++ |+++.+|.... ...+.+...+ .++.++.+....
T Consensus 196 ~~~--~~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 196 DRE--DLSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred ccc--cHHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEecc
Confidence 764 2222 45555555799999999975 688999999997 99999987643 2222222222 467888776543
Q ss_pred CCCcC---CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 316 GWKPK---TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 316 ~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..... ..+..+.+++..+.+.. . .+.|+++++++||+.+.+++.. |++++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 269 YCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred ccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCccceEEEeC
Confidence 21110 12334455555665432 2 4689999999999999988877 888763
No 103
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=8.6e-32 Score=250.73 Aligned_cols=303 Identities=18% Similarity=0.157 Sum_probs=240.8
Q ss_pred eeEEEEecCCCC-----eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC----C------eEEEEEeeCCCCCC
Q 017460 13 CKAAVAWGAGQP-----LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP----Q------CCRIVESVGPGVTE 77 (371)
Q Consensus 13 ~~a~~~~~~~~~-----l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----~------~~G~V~~~G~~v~~ 77 (371)
|||+++++++.+ +++.+++.|++.+++|+||+.++++|++|+..+.|..+ + ++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 689999888763 66667888889999999999999999999988776543 1 69999999999999
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
+++||+|+...... . .|+|++|+.++.+.++++|+
T Consensus 81 ~~~Gd~V~~~~~~~---------------------------~------------------~g~~~~~~~v~~~~~~~ip~ 115 (336)
T cd08252 81 FKVGDEVYYAGDIT---------------------------R------------------PGSNAEYQLVDERIVGHKPK 115 (336)
T ss_pred CCCCCEEEEcCCCC---------------------------C------------------CccceEEEEEchHHeeeCCC
Confidence 99999998751000 1 14899999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCC-----CCEEEEEcc-ChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISK-----GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF 230 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~-----~~~VlI~Ga-g~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~l 230 (371)
+++.++++.+++.+.+||+++.+.+.+.+ +++|+|+|+ |++|++++++|+++| + +|+++++++++++.++++
T Consensus 116 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~ 194 (336)
T cd08252 116 SLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKEL 194 (336)
T ss_pred CCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhc
Confidence 99999999999999999999877788877 999999985 999999999999999 7 999999999999999999
Q ss_pred CCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEE
Q 017460 231 GVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLK 310 (371)
Q Consensus 231 g~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 310 (371)
|++.+++++ . ++.+.++...++++|++||++++...+..++++++.+ |+++.+|... ..++.... +.++.++.
T Consensus 195 g~~~~~~~~--~-~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~~~~~~~~-~~~~~~~~ 267 (336)
T cd08252 195 GADHVINHH--Q-DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--EPLDLGPL-KSKSASFH 267 (336)
T ss_pred CCcEEEeCC--c-cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--Ccccchhh-hcccceEE
Confidence 998888875 2 5666666443338999999999766889999999997 9999998652 22222221 13567776
Q ss_pred ecccCCCC--c-------CCCHHHHHHHHHcCCCCCCcc-eeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 311 GSLFGGWK--P-------KTDLPSLVNRYLKKEFMVDEF-ITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 311 g~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
+..+.... . ...+.++++++.++.+.+... ....++++++.+|++.+.++... |++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 268 WEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 65433211 0 123667888888998775321 12458999999999999988877 88764
No 104
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=9.3e-31 Score=241.23 Aligned_cols=299 Identities=25% Similarity=0.302 Sum_probs=240.4
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C----eEEEEEeeCCCCCCCCCCC
Q 017460 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q----CCRIVESVGPGVTEFNEGE 82 (371)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~----~~G~V~~~G~~v~~~~~Gd 82 (371)
+|+.+...+.+ +.+.+.+.|.+.+++|+|+|.++++|++|+....|.++ . ++|+|+.+|++++.+++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGD 80 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCCCCCccCCcceeEEEEEECCCCCCCCCCC
Confidence 45666555543 66777777788999999999999999999988876542 1 6999999999999999999
Q ss_pred EEEeeecCCCCCCccccCCCCCCcccccccccccccC-CCccceeccCcccccccCccceeeEEEeeCCceEECCCCCCh
Q 017460 83 HVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHS-DQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPL 161 (371)
Q Consensus 83 ~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~-~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~ 161 (371)
+|++. . . |+|++|+.++.+.++++|++++.
T Consensus 81 ~V~~~-------------------------------~~~------------------g~~~~~~~~~~~~~~~~p~~~~~ 111 (320)
T cd05286 81 RVAYA-------------------------------GPP------------------GAYAEYRVVPASRLVKLPDGISD 111 (320)
T ss_pred EEEEe-------------------------------cCC------------------CceeEEEEecHHHceeCCCCCCH
Confidence 99976 2 2 37999999999999999999999
Q ss_pred hhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC
Q 017460 162 EKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND 240 (371)
Q Consensus 162 ~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~ 240 (371)
.+++.+++.+.++++++.+..++.+|++|||+|+ |++|++++++++.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 112 ~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~- 189 (320)
T cd05286 112 ETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR- 189 (320)
T ss_pred HHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC-
Confidence 9999998899999999877788999999999995 9999999999999999 899999999999999999998888775
Q ss_pred CCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCCC
Q 017460 241 NNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWK 318 (371)
Q Consensus 241 ~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~ 318 (371)
...+.+.++.++.+ ++|++++++++ ..+..++++++++ |+++.+|..... ...++...+ .++.++.+.....+.
T Consensus 190 -~~~~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (320)
T cd05286 190 -DEDFVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHYI 265 (320)
T ss_pred -chhHHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhhc
Confidence 56788888888877 99999999997 4788999999997 999999865432 111222222 356666544332221
Q ss_pred cC-----CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 319 PK-----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 319 ~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.. ..+.++++++.++.+.+. .++.|+++++.++|+.+.++... |+++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 266 ATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 11 224457778888876654 45889999999999999888777 888753
No 105
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.2e-31 Score=243.94 Aligned_cols=301 Identities=22% Similarity=0.251 Sum_probs=242.2
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~ 79 (371)
|||+++++.+.+ +++++.+.|.+.+++|+|++.++++|++|+.++.|... + ++|+|+++|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 799999887764 78888888889999999999999999999988776532 1 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+++.. |+.+. .|+|++|+.++.++++++|+++
T Consensus 81 ~Gd~V~~~~~-------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~~ 117 (326)
T cd08272 81 VGDEVYGCAG-------------------------GLGGL------------------QGSLAEYAVVDARLLALKPANL 117 (326)
T ss_pred CCCEEEEccC-------------------------CcCCC------------------CCceeEEEEecHHHcccCCCCC
Confidence 9999998620 00001 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++.+++.+++.+.+|++++.+..+++++++++|+|+ |.+|++++++++..|+ +|++++++ ++.+.++++|++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~ 195 (326)
T cd08272 118 SMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYY 195 (326)
T ss_pred CHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEec
Confidence 999999999999999999878889999999999985 9999999999999999 89998888 88899999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCC-
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGG- 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~- 316 (371)
. .. +.+.+++++.+ ++|+++|++++. .+..++.++++. |+++.++... .. .+.... .++.++.+.....
T Consensus 196 ~--~~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~-~~--~~~~~~-~~~~~~~~~~~~~~ 266 (326)
T cd08272 196 R--ET-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY-GRVVSILGGA-TH--DLAPLS-FRNATYSGVFTLLP 266 (326)
T ss_pred c--hh-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC-CEEEEEecCC-cc--chhhHh-hhcceEEEEEcccc
Confidence 5 44 77888888887 899999999984 688899999996 9999997653 11 222222 3466666554321
Q ss_pred -CC------cCCCHHHHHHHHHcCCCCCCccee-eeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 -WK------PKTDLPSLVNRYLKKEFMVDEFIT-HNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 -~~------~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.. ....+..+++++.++.+.. +++ +.|+++++.++++.+.++... |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 267 LLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred cccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 10 0134566777787887653 334 889999999999999887766 888764
No 106
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=8.4e-31 Score=242.21 Aligned_cols=306 Identities=22% Similarity=0.319 Sum_probs=242.7
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~~ 79 (371)
||++++..++.+ +.+.+.|.|.+.+++|+|++.++++|++|+..+.|.++. ++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 688888776543 888899999999999999999999999999888764321 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+..... ..+. .|++++|+.++.+.++++|+++
T Consensus 81 ~Gd~v~~~~~~-------------------------~~~~------------------~g~~~~~~~~~~~~~~~ip~~~ 117 (325)
T cd08253 81 VGDRVWLTNLG-------------------------WGRR------------------QGTAAEYVVVPADQLVPLPDGV 117 (325)
T ss_pred CCCEEEEeccc-------------------------cCCC------------------CcceeeEEEecHHHcEeCCCCC
Confidence 99999987310 0001 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+..+++.+++++.+|++++.+..++.+|++|+|+|+ |.+|+++++++++.|+ +|+++++++++.+.++++|++.+++.
T Consensus 118 ~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (325)
T cd08253 118 SFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNY 196 (325)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877789999999999985 9999999999999999 89999999999999999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
+ ..++.+.+.+++.+ ++|++++++++. .+...+++++.. |+++.++.......+++.. .+.++.++.+......
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 197 R--AEDLADRILAATAGQGVDVIIEVLANV-NLAKDLDVLAPG-GRIVVYGSGGLRGTIPINP-LMAKEASIRGVLLYTA 271 (325)
T ss_pred C--CcCHHHHHHHHcCCCceEEEEECCchH-HHHHHHHhhCCC-CEEEEEeecCCcCCCChhH-HHhcCceEEeeehhhc
Confidence 6 55677788887776 999999999875 678889999996 9999998754222222222 1234666665543221
Q ss_pred Cc---CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 318 KP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 318 ~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.. ...+..+.+++..+.+.+. .++.|+++++.++++.+.++... |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRPV--IAREYPLEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccCc--cccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 10 1224445566667765443 45889999999999999888777 888753
No 107
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=9.7e-31 Score=241.44 Aligned_cols=299 Identities=25% Similarity=0.354 Sum_probs=243.1
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~~~~ 79 (371)
|||+++.+.+.+ +++.+.+.|.+.+++|+||+.++++|++|+....|.++ . ++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 799999875543 77888888888999999999999999999988876542 1 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.. .+ |+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (323)
T cd05276 81 VGDRVCALL------------------------------AG------------------GGYAEYVVVPAGQLLPVPEGL 112 (323)
T ss_pred CCCEEEEec------------------------------CC------------------CceeEEEEcCHHHhccCCCCC
Confidence 999999762 11 379999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
++.+++.+..++.++++++.+.+.+.++++|+|+|+ |++|++++++++..|+ +|+++++++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 113 SLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999877788999999999996 8999999999999999 89999999999999999999888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 316 (371)
. ..++.+.+...+.+ ++|+++|++|+. .+...+.+++++ |+++.+|...... .......+ .++.++.++....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 266 (323)
T cd05276 192 R--TEDFAEEVKEATGGRGVDVILDMVGGD-YLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLRS 266 (323)
T ss_pred C--chhHHHHHHHHhCCCCeEEEEECCchH-HHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeeccc
Confidence 5 55677888887776 899999999975 578889999996 9999998654321 22222222 4678888776544
Q ss_pred CCcC-------CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 317 WKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 317 ~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.... ..+.++++++.++++.+. .++.|++++++++++.+.++... |+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 267 RSLEEKAALAAAFREHVWPLFASGRIRPV--IDKVFPLEEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred hhhhccHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 2111 124566777878876543 56899999999999999887766 7653
No 108
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.7e-31 Score=250.16 Aligned_cols=301 Identities=25% Similarity=0.302 Sum_probs=230.0
Q ss_pred eeEEEEecCCCC---eEEEEeecCCC-CCCcEEEEEeeecCCcchhhhhcCCC-----------------C--------C
Q 017460 13 CKAAVAWGAGQP---LVVEEVEVNPP-QPEEIRIKVVCTSLCRSDITAWETQW-----------------P--------Q 63 (371)
Q Consensus 13 ~~a~~~~~~~~~---l~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~-----------------~--------~ 63 (371)
|||+++++++++ +++.+.+.|.| .++||+||++++++|++|+.++.|.. . .
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 789999888875 88899999999 49999999999999999998877631 1 1
Q ss_pred eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceee
Q 017460 64 CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 143 (371)
Q Consensus 64 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 143 (371)
++|+|+++|++++.+++||+|++.+..+ . .|+|++
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~---------------------------~------------------~g~~~~ 115 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPW---------------------------S------------------QGTHAE 115 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCC---------------------------C------------------Ccccee
Confidence 6999999999999999999999863110 1 248999
Q ss_pred EEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCC----CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEc
Q 017460 144 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISK----GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 218 (371)
Q Consensus 144 ~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~----~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~ 218 (371)
|+.++++.++++|++++..+++.+++++.+|++++.+.+.+.+ |++|+|+|+ |++|++++++|+++|+ +|+++.
T Consensus 116 ~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~ 194 (350)
T cd08248 116 YVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTTC 194 (350)
T ss_pred EEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEe
Confidence 9999999999999999999999999999999999866666654 999999985 9999999999999999 888886
Q ss_pred CChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCC--ee
Q 017460 219 TNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKP--EV 296 (371)
Q Consensus 219 ~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~--~~ 296 (371)
++ ++.+.++++|++.+++.. ..++.+.+... +++|++||++|+. .+..++++++++ |+++.+|...... ..
T Consensus 195 ~~-~~~~~~~~~g~~~~~~~~--~~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 267 (350)
T cd08248 195 ST-DAIPLVKSLGADDVIDYN--NEDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPLLKNTDKL 267 (350)
T ss_pred Cc-chHHHHHHhCCceEEECC--ChhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCcccccccc
Confidence 54 678888999998888775 44555544321 3899999999986 789999999997 9999998543211 11
Q ss_pred ecchhee-----eeccEEEe----cc--cC-CCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-
Q 017460 297 AAHYGLF-----LSGRTLKG----SL--FG-GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL- 363 (371)
Q Consensus 297 ~~~~~~~-----~~~~~i~g----~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~- 363 (371)
......+ .....+.. .. .. .......+.++++++.++.+.+. +++.|+++++.++|+.+.+++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 345 (350)
T cd08248 268 GLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIKPV--IDKVFPFEEVPEAYEKVESGHARG 345 (350)
T ss_pred cccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEecc--cceeecHHHHHHHHHHHhcCCCce
Confidence 1100000 00000000 00 00 01112457888999999986543 56899999999999999887766
Q ss_pred eEEEe
Q 017460 364 RSVIH 368 (371)
Q Consensus 364 kvvi~ 368 (371)
|++++
T Consensus 346 ~vv~~ 350 (350)
T cd08248 346 KTVIK 350 (350)
T ss_pred EEEeC
Confidence 77763
No 109
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=1.4e-30 Score=241.31 Aligned_cols=302 Identities=14% Similarity=0.160 Sum_probs=233.1
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~ 79 (371)
|||+++++++. .+++++.|.|++++++|+||+.++++|++|+..+.|.++ + ++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998875 488999999999999999999999999999988876531 1 6999998 7778899
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|++.... .| .. . .|+|++|++++.+.++++|+++
T Consensus 79 ~Gd~V~~~~~~--------------~~---------~~-~------------------~g~~~~~~~v~~~~~~~lp~~~ 116 (324)
T cd08288 79 PGDRVVLTGWG--------------VG---------ER-H------------------WGGYAQRARVKADWLVPLPEGL 116 (324)
T ss_pred CCCEEEECCcc--------------CC---------CC-C------------------CCcceeEEEEchHHeeeCCCCC
Confidence 99999985210 00 00 1 2489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhh--hhcCCC-CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE
Q 017460 160 PLEKICLLSCGLSAGLGAAW--NVADIS-KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF 235 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~--~~~~~~-~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v 235 (371)
+.++++.+++.+.+++.++. +..+.. ++++|||+|+ |++|++++|+|+++|+ +|++++.++++.+.++++|++++
T Consensus 117 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 195 (324)
T cd08288 117 SARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEI 195 (324)
T ss_pred CHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEE
Confidence 99999999989999987753 223445 5789999996 9999999999999999 89999999999999999999988
Q ss_pred eCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEeccc
Q 017460 236 LNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLF 314 (371)
Q Consensus 236 i~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~ 314 (371)
++++ + +...++.++.+++|.++|++++. .+...+..++.+ |+++.+|.... .....+...+ .++.++.+.+.
T Consensus 196 ~~~~--~--~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~ 268 (324)
T cd08288 196 IDRA--E--LSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGIDS 268 (324)
T ss_pred EEcc--h--hhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEEe
Confidence 8875 2 23355556555789999999973 577888889986 99999987532 1122222223 46888887653
Q ss_pred CCCCc---CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 315 GGWKP---KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 315 ~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..... ...+..+++++..+.+.+ +.+.|+++++.+|++.+.+++.. |+++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 269 VMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred ecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 32211 123445666666776543 35899999999999999988877 888764
No 110
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=1.5e-30 Score=243.91 Aligned_cols=306 Identities=17% Similarity=0.233 Sum_probs=226.9
Q ss_pred eEEEEecCCCCeEEEEeecCCC---CCCcEEEEEeeecCCcchhhhhcCCC------CC-----eEEEEEeeCCCCC-CC
Q 017460 14 KAAVAWGAGQPLVVEEVEVNPP---QPEEIRIKVVCTSLCRSDITAWETQW------PQ-----CCRIVESVGPGVT-EF 78 (371)
Q Consensus 14 ~a~~~~~~~~~l~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~------~~-----~~G~V~~~G~~v~-~~ 78 (371)
|++++.+++.+++++.++.|.| ++++|+||+.++++|++|+..+.+.. +. ++|+|+++|++++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6889999888888887777665 89999999999999999988765432 21 6999999999998 89
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC----ceEE
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG----CAVK 154 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~----~~~~ 154 (371)
++||+|++.....|+ . .|+|++|++++.. .+++
T Consensus 82 ~~Gd~V~~~~~~~~~-------------------------~------------------~g~~~~~~~v~~~~~~~~~~~ 118 (352)
T cd08247 82 KVGDEVCGIYPHPYG-------------------------G------------------QGTLSQYLLVDPKKDKKSITR 118 (352)
T ss_pred CCCCEEEEeecCCCC-------------------------C------------------CceeeEEEEEccccccceeEE
Confidence 999999987432211 1 2489999999987 7899
Q ss_pred CCCCCChhhhhhcchhhhhHHhHhhhhc-CCCCCCEEEEEcc-ChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcC
Q 017460 155 VSSIAPLEKICLLSCGLSAGLGAAWNVA-DISKGSTVVIFGL-GTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFG 231 (371)
Q Consensus 155 ~P~~~~~~~aa~~~~~~~~a~~~l~~~~-~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg 231 (371)
+|+++++.+++.+++.+.+||+++.+.. ++++|++|+|+|+ |.+|++++++|+.+|. +.++++. ++++.+.++++|
T Consensus 119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g 197 (352)
T cd08247 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLG 197 (352)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhC
Confidence 9999999999999999999999986666 7999999999987 7999999999999854 3566665 456666889999
Q ss_pred CceEeCCCCCCch---HHHHHHH-HhCC-CccEEEEcCCChHHHHHHHHHhc---cCCceEEEecCCCCCCeee------
Q 017460 232 VTEFLNPNDNNEP---VQQVIKR-ITDG-GADYSFECIGDTGMITTALQSCC---DGWGLAVTLGVPKLKPEVA------ 297 (371)
Q Consensus 232 ~~~vi~~~~~~~~---~~~~v~~-~~~g-g~dvVid~~g~~~~l~~~~~~l~---~~~G~~v~~g~~~~~~~~~------ 297 (371)
++.+++.+ ..+ +...+.+ .+++ ++|++||++|+...+..++++++ ++ |+++.++.... ..+.
T Consensus 198 ~~~~i~~~--~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~~~~~-~~~~~~~~~~ 273 (352)
T cd08247 198 ADHFIDYD--AHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIVGDYK-ANYKKDTFNS 273 (352)
T ss_pred CCEEEecC--CCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEeCCCc-ccccchhhhh
Confidence 98888875 333 4444444 4435 99999999998557888999999 96 99998753221 1110
Q ss_pred -----cchheeeeccEEEecccCC--C-CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 298 -----AHYGLFLSGRTLKGSLFGG--W-KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 298 -----~~~~~~~~~~~i~g~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.....+.++.++....+.. . .....+..+++++.++.+.+. ++++|+++++++||+.+++++.. |++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 274 WDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVKPP--IDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred ccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeEee--eccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 0001111122221111100 0 001346778888888876533 56889999999999999988877 88876
Q ss_pred C
Q 017460 369 M 369 (371)
Q Consensus 369 ~ 369 (371)
+
T Consensus 352 ~ 352 (352)
T cd08247 352 V 352 (352)
T ss_pred C
Confidence 3
No 111
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=1e-30 Score=242.84 Aligned_cols=294 Identities=19% Similarity=0.193 Sum_probs=230.7
Q ss_pred eEEEEecCCC------CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC--------C-----CeEEEEEeeCCC
Q 017460 14 KAAVAWGAGQ------PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW--------P-----QCCRIVESVGPG 74 (371)
Q Consensus 14 ~a~~~~~~~~------~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--------~-----~~~G~V~~~G~~ 74 (371)
||+.+...++ .+++++.|.|++.+++|+||+.++++|+.|.....+.. + .++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 5666644331 28999999999999999999999999997754443321 1 169999999964
Q ss_pred CCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeC-CceE
Q 017460 75 VTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHS-GCAV 153 (371)
Q Consensus 75 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~-~~~~ 153 (371)
.+++||+|+.. ++|++|+.++. +.++
T Consensus 83 --~~~~Gd~V~~~---------------------------------------------------~~~~~~~~v~~~~~~~ 109 (329)
T cd05288 83 --DFKVGDLVSGF---------------------------------------------------LGWQEYAVVDGASGLR 109 (329)
T ss_pred --CCCCCCEEecc---------------------------------------------------cceEEEEEecchhhcE
Confidence 79999999865 26999999999 9999
Q ss_pred ECCCCCC--hhhhhh-cchhhhhHHhHhhhhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 017460 154 KVSSIAP--LEKICL-LSCGLSAGLGAAWNVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 229 (371)
Q Consensus 154 ~~P~~~~--~~~aa~-~~~~~~~a~~~l~~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 229 (371)
++|++++ ..+++. +++++.+|++++.+...+.++++|||+| +|.+|++++++|+..|+ +|+++++++++.+.+++
T Consensus 110 ~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~ 188 (329)
T cd05288 110 KLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVE 188 (329)
T ss_pred ECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 9999985 445545 7889999999987778899999999998 49999999999999999 89999999999999988
Q ss_pred -cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeee----c-chhee
Q 017460 230 -FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVA----A-HYGLF 303 (371)
Q Consensus 230 -lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~----~-~~~~~ 303 (371)
+|++++++++ +.++.+.+.+++++++|++||++|+ ..+..++++++++ |+++.+|......... + ....+
T Consensus 189 ~~g~~~~~~~~--~~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~ 264 (329)
T cd05288 189 ELGFDAAINYK--TPDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGNII 264 (329)
T ss_pred hcCCceEEecC--ChhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHHHh
Confidence 9998888886 5567778887775589999999997 4789999999997 9999998654321111 0 12223
Q ss_pred eeccEEEecccCCCCc--CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 304 LSGRTLKGSLFGGWKP--KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 304 ~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.++.++.++....... ...+.++++++.++.+.+.+. ..++++++.++++.+.+++.. |+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~--~~~~l~~~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 265 TKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRED--VVEGLENAPEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred hCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccccc--ccccHHHHHHHHHHHhcCCCccceeC
Confidence 4678887765543211 134667888888998876533 568999999999999887766 7663
No 112
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.1e-30 Score=239.95 Aligned_cols=304 Identities=24% Similarity=0.261 Sum_probs=238.6
Q ss_pred eeEEEEecCC--CCeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC---C-C------eEEEEEeeCCCCCCCCC
Q 017460 13 CKAAVAWGAG--QPLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW---P-Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 13 ~~a~~~~~~~--~~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~-~------~~G~V~~~G~~v~~~~~ 80 (371)
|||+++.+++ +.+++.+.|.|++.+++|+||+.++++|++|+..+.+.. . + ++|+|+.+|++++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7999999988 359999999999999999999999999999998876543 1 1 69999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|++.... . .. |+|++|+.++.+.++++|++++
T Consensus 81 Gd~V~~~~~~--------------------------~-~~------------------~~~~s~~~~~~~~~~~ip~~~~ 115 (325)
T cd08271 81 GDRVAYHASL--------------------------A-RG------------------GSFAEYTVVDARAVLPLPDSLS 115 (325)
T ss_pred CCEEEeccCC--------------------------C-CC------------------ccceeEEEeCHHHeEECCCCCC
Confidence 9999986210 0 11 3799999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
..+++.+.+++.+|++++.+.+++.+|++|+|+|+ |.+|+++++++++.|+ +|+++. ++++.+.++++|++.+++..
T Consensus 116 ~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~~ 193 (325)
T cd08271 116 FEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDYN 193 (325)
T ss_pred HHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecCC
Confidence 99999999999999999877788999999999997 7899999999999999 888876 67888888999998888776
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe-eecchheeeeccEEEecccCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFGGW 317 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~~~ 317 (371)
...+...+++++++ ++|++++++++. .....++++++. |+++.++....... ..+......++..+........
T Consensus 194 --~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd08271 194 --DEDVCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGD 269 (325)
T ss_pred --CccHHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEecccccccc
Confidence 55677888888777 899999999985 566789999996 99999875432110 0011111122333333221110
Q ss_pred -----CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 318 -----KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 318 -----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
..++.+.++++++.++.+.+. .++.|+++++.++++.+.++... |+++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 270 PAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 001234567788888886543 34889999999999999888777 888763
No 113
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=7.7e-31 Score=236.40 Aligned_cols=258 Identities=30% Similarity=0.457 Sum_probs=211.4
Q ss_pred cEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcc
Q 017460 39 EIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCE 107 (371)
Q Consensus 39 evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~ 107 (371)
||+|+|.++++|+.|+..+.|..+ + ++|+|+++|++++.|++||+|+..+..+|+.|.+|+. .|.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999887653 1 6999999999999999999999999999999999997 666
Q ss_pred cccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCC
Q 017460 108 VLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKG 187 (371)
Q Consensus 108 ~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~ 187 (371)
..... +.. . .|+|++|+.++.+.++++|+++++++++.+++++.+|++++.....++++
T Consensus 77 ~~~~~--~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~ 135 (271)
T cd05188 77 GGGIL--GEG-L------------------DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPG 135 (271)
T ss_pred CCCEe--ccc-c------------------CCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCC
Confidence 55432 111 1 25899999999999999999999999999989999999998766667999
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCC
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 266 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~ 266 (371)
++|||+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++.. ...+.+.+. .+.+ ++|++|++++.
T Consensus 136 ~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~-~~~~~~~d~vi~~~~~ 211 (271)
T cd05188 136 DTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYK--EEDLEEELR-LTGGGGADVVIDAVGG 211 (271)
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCC--cCCHHHHHH-HhcCCCCCEEEECCCC
Confidence 999999986699999999999998 999999999999999999998888776 455666666 5555 89999999998
Q ss_pred hHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCCHHHHHHH
Q 017460 267 TGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 329 (371)
Q Consensus 267 ~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 329 (371)
...+..++++++++ |+++.++..............+.+++++.++....+ .++++++++
T Consensus 212 ~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 270 (271)
T cd05188 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDL 270 (271)
T ss_pred HHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhh
Confidence 55788999999997 999999876543322223333456888888876542 345555543
No 114
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=6.1e-30 Score=237.75 Aligned_cols=295 Identities=21% Similarity=0.282 Sum_probs=229.5
Q ss_pred eEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCCCC
Q 017460 14 KAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 14 ~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~~~ 80 (371)
||+++...+.+ +++.+.+.|.+.+++|+|++.++++|++|+.++.|..+. ++|+|+.+|++++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 78888877654 888888999999999999999999999999888775421 69999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|++.. .. |+|++|+.++.+.++++|++++
T Consensus 82 Gd~V~~~~------------------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~ 113 (331)
T cd08273 82 GDRVAALT------------------------------RV------------------GGNAEYINLDAKYLVPVPEGVD 113 (331)
T ss_pred CCEEEEeC------------------------------CC------------------cceeeEEEechHHeEECCCCCC
Confidence 99999862 11 3799999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPN 239 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~ 239 (371)
..+++.+++++.+|++++.+.+++.++++|+|+|+ |.+|++++++|+..|+ +|++++. +++.+.++++|+.. ++.+
T Consensus 114 ~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~~ 190 (331)
T cd08273 114 AAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDYR 190 (331)
T ss_pred HHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcCC
Confidence 99999999999999999877788999999999986 9999999999999999 8998887 88889999999754 4443
Q ss_pred CCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecc---------------hheee
Q 017460 240 DNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH---------------YGLFL 304 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~---------------~~~~~ 304 (371)
..++... ...++++|+++|++++. .+..++++++.+ |+++.+|.........+. ...+.
T Consensus 191 --~~~~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (331)
T cd08273 191 --TKDWLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTG 264 (331)
T ss_pred --Ccchhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceecc
Confidence 3334333 33334899999999986 488999999996 999999876442221111 01111
Q ss_pred eccEEEecccCCC-C---cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 305 SGRTLKGSLFGGW-K---PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 305 ~~~~i~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
++.++........ . ..+.+..+++++.++.+.+. ++++|+++++.++++.+.++... |+++
T Consensus 265 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 265 RRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPK--IAKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCC--cceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 1223322222100 0 01356678888889887643 56889999999999999887776 7765
No 115
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.9e-29 Score=233.52 Aligned_cols=306 Identities=23% Similarity=0.323 Sum_probs=241.2
Q ss_pred eeEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~~~~ 79 (371)
|||+++.+.+. .+++.+.+.|.+.+++++|++.++++|++|+....|... . ++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 68888877554 377778888888999999999999999999988766532 1 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+.++...+ . . .|+|++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~~~~~------------------------~-~------------------~g~~~~~~~~~~~~~~~~p~~~ 117 (328)
T cd08268 81 VGDRVSVIPAADL------------------------G-Q------------------YGTYAEYALVPAAAVVKLPDGL 117 (328)
T ss_pred CCCEEEecccccc------------------------C-C------------------CccceEEEEechHhcEeCCCCC
Confidence 9999998732100 0 1 1489999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+..+++.+++++.++++++.....+.++++++|+|+ |.+|++++++++..|+ +++++++++++++.++++|++.+++.
T Consensus 118 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 196 (328)
T cd08268 118 SFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVT 196 (328)
T ss_pred CHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEec
Confidence 999999999999999999877788999999999986 9999999999999999 89999999999999999998888877
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh-eeeeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG-LFLSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~g~~~~~ 316 (371)
+ ...+...+.+.+.+ ++|++++++++ .....++++++++ |+++.+|..... ...+... .+.++.++.+..+..
T Consensus 197 ~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 197 D--EEDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSGE-PTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred C--CccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCCC-CCCCchHHHhhcCCEEEEEeccc
Confidence 5 55677778888777 89999999998 4688899999997 999999865431 1122222 234677777765432
Q ss_pred CCc-CCC----HHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKP-KTD----LPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~-~~~----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
... ... +..+.+++.++.+... .+..|+++++.++++.+.++... |+++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKPV--VDRVFPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcCC--cccEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 211 112 2334444556665543 45789999999999999887776 888763
No 116
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.97 E-value=2.1e-29 Score=232.98 Aligned_cols=301 Identities=24% Similarity=0.343 Sum_probs=243.0
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC------C-----eEEEEEeeCCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP------Q-----CCRIVESVGPGVTEFN 79 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------~-----~~G~V~~~G~~v~~~~ 79 (371)
|+|+.+...+.+ +.+.+.+.|.+++++++||+.++++|++|+..+.+.++ . ++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 678888776654 66777777778999999999999999999988876432 1 6999999999999999
Q ss_pred CCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCC
Q 017460 80 EGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIA 159 (371)
Q Consensus 80 ~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~ 159 (371)
+||+|+... .+ |++++|+.++.+.++++|+++
T Consensus 81 ~Gd~V~~~~------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~ 112 (325)
T TIGR02824 81 VGDRVCALV------------------------------AG------------------GGYAEYVAVPAGQVLPVPEGL 112 (325)
T ss_pred CCCEEEEcc------------------------------CC------------------CcceeEEEecHHHcEeCCCCC
Confidence 999999761 11 379999999999999999999
Q ss_pred ChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 160 PLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 160 ~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
+..+++.+++++.++++++.+...++++++++|+|+ |.+|++++++++..|+ +|+++.+++++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 113 SLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 999999999999999998778889999999999985 9999999999999999 89999999999998999998878776
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCC
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGG 316 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~ 316 (371)
. ..++.+.++...++ ++|++++++++. .+..++++++++ |+++.+|....... .++...+ .++.++.+.....
T Consensus 192 ~--~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 266 (325)
T TIGR02824 192 R--EEDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLRA 266 (325)
T ss_pred C--chhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehhh
Confidence 5 55677888888776 899999999974 688899999996 99999986542111 2222222 5688888776543
Q ss_pred CCcC-------CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 317 WKPK-------TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 317 ~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
.... ..+.++++++.++.+.+. .++.|+++++.++++.+.++... |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 267 RPVAEKAAIAAELREHVWPLLASGRVRPV--IDKVFPLEDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred cchhhhHHHHHHHHHHHHHHHHCCcccCc--cccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence 2111 123456677778876543 46889999999999999887766 888753
No 117
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.97 E-value=2.5e-29 Score=230.25 Aligned_cols=282 Identities=24% Similarity=0.376 Sum_probs=223.7
Q ss_pred cCCCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccC
Q 017460 32 VNPPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKS 100 (371)
Q Consensus 32 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~ 100 (371)
.|++.+++|+||+.++++|+.|+..+.|.++. ++|+|+++|++++.+++||+|++....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 57788999999999999999999888775321 699999999999999999999986210
Q ss_pred CCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhh
Q 017460 101 DKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWN 180 (371)
Q Consensus 101 ~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~ 180 (371)
. .|+|++|+.++++.++++|++++.++++.++.++.+|++++ +
T Consensus 72 ------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~ 114 (303)
T cd08251 72 ------------------S------------------MGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-A 114 (303)
T ss_pred ------------------C------------------CcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-H
Confidence 1 14899999999999999999999999999999999999997 6
Q ss_pred hcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-Ccc
Q 017460 181 VADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GAD 258 (371)
Q Consensus 181 ~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~d 258 (371)
..++++|++|+|+| +|.+|++++++++++|+ +|+++++++++++.++++|++.+++.. ..++...+..++++ ++|
T Consensus 115 ~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~~~~~~d 191 (303)
T cd08251 115 RAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYV--EEDFEEEIMRLTGGRGVD 191 (303)
T ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCC--CccHHHHHHHHcCCCCce
Confidence 78899999999996 59999999999999999 899999999999999999999888876 56788888888877 999
Q ss_pred EEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCC---Cc---CCCHHHHHHHHHc
Q 017460 259 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGW---KP---KTDLPSLVNRYLK 332 (371)
Q Consensus 259 vVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~---~~---~~~~~~~~~~~~~ 332 (371)
+++|++++ ..+...++++++. |+++.+|.........+....+.++.++....+... .. .+.+.++++++.+
T Consensus 192 ~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (303)
T cd08251 192 VVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEE 269 (303)
T ss_pred EEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHC
Confidence 99999976 5788899999996 999998765322111122222222333222211110 00 1235667788888
Q ss_pred CCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 333 KEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 333 ~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
+.+++. .++.|+++++.++++.+.+++.. |+++
T Consensus 270 g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 270 GELRPT--VSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred CCccCC--CceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 876543 45889999999999999887766 7663
No 118
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.97 E-value=8.8e-29 Score=228.48 Aligned_cols=299 Identities=26% Similarity=0.430 Sum_probs=240.6
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCC-CCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQ-PEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEF 78 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~ 78 (371)
|+|+++...+.+ +++.+.+ |.+. +++++|++.++++|++|+..+.|.+. + ++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 688998754433 7777777 7665 59999999999999999988766532 1 699999999999999
Q ss_pred CCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCC
Q 017460 79 NEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSI 158 (371)
Q Consensus 79 ~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~ 158 (371)
++||+|+... .. |++++|+.++.+.++++|++
T Consensus 80 ~~G~~V~~~~------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 80 KVGDRVVALT------------------------------GQ------------------GGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred CCCCEEEEec------------------------------CC------------------ceeEEEEEcCHHHceeCCCC
Confidence 9999999872 02 37999999999999999999
Q ss_pred CChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeC
Q 017460 159 APLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 159 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~ 237 (371)
++..+++.+..++.+|++++.+..+++++++|+|+|+ |.+|++++++++..|+ +|++++.++++.+.++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVID 190 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeee
Confidence 9999998888899999999866788999999999996 9999999999999999 8999999999999999999988887
Q ss_pred CCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCe-eecchheeeeccEEEecccC
Q 017460 238 PNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPE-VAAHYGLFLSGRTLKGSLFG 315 (371)
Q Consensus 238 ~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~~i~g~~~~ 315 (371)
.. ..++.+.+...+++ ++|++++++|+ ..+..++++++++ |+++.+|....... +... ..+.++.++.+....
T Consensus 191 ~~--~~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 265 (323)
T cd08241 191 YR--DPDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIPQIPAN-LLLLKNISVVGVYWG 265 (323)
T ss_pred cC--CccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcCcCCHH-HHhhcCcEEEEEecc
Confidence 75 55788888888877 89999999997 4788899999997 99999986433211 1111 223457788777654
Q ss_pred CCCc------CCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEe
Q 017460 316 GWKP------KTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIH 368 (371)
Q Consensus 316 ~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~ 368 (371)
.+.. ...+.++++++.++.+.+ +.++.|+++++.++++.+.++... |++++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 266 AYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKATGKVVLT 323 (323)
T ss_pred cccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCCCcEEeC
Confidence 3321 124566788888887653 356889999999999998877766 77763
No 119
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.97 E-value=2.6e-29 Score=230.72 Aligned_cols=291 Identities=22% Similarity=0.310 Sum_probs=230.3
Q ss_pred eeEEEEecCCCC--eEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC--------C-----eEEEEEeeCCCCCC
Q 017460 13 CKAAVAWGAGQP--LVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP--------Q-----CCRIVESVGPGVTE 77 (371)
Q Consensus 13 ~~a~~~~~~~~~--l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~-----~~G~V~~~G~~v~~ 77 (371)
|+|++++.++.. +++.+.+.|.+++++|+||+.++++|++|+..+.|... . ++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 789999877653 56777788888999999999999999999988877541 1 69999999999999
Q ss_pred CCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCC
Q 017460 78 FNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSS 157 (371)
Q Consensus 78 ~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~ 157 (371)
+++||+|+..+... .. |+|++|+.++...++++|+
T Consensus 81 ~~~G~~V~~~~~~~---------------------------~~------------------g~~~~~~~~~~~~~~~~p~ 115 (309)
T cd05289 81 FKVGDEVFGMTPFT---------------------------RG------------------GAYAEYVVVPADELALKPA 115 (309)
T ss_pred CCCCCEEEEccCCC---------------------------CC------------------CcceeEEEecHHHhccCCC
Confidence 99999999873100 12 3799999999999999999
Q ss_pred CCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe
Q 017460 158 IAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 158 ~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi 236 (371)
+++..+++.+++.+.++++++.+...+.++++|+|+|+ |.+|++++++++..|+ +|++++.++ +.+.++++|++.++
T Consensus 116 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~~ 193 (309)
T cd05289 116 NLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEVI 193 (309)
T ss_pred CCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEEE
Confidence 99999999999899999999866667999999999996 9999999999999999 888888777 88888999988888
Q ss_pred CCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccC
Q 017460 237 NPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFG 315 (371)
Q Consensus 237 ~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~ 315 (371)
+.+ ..++.+ .+.+ ++|+++|++++. ....++++++++ |+++.+|....... ..+.++.++....+.
T Consensus 194 ~~~--~~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~~ 260 (309)
T cd05289 194 DYT--KGDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFVE 260 (309)
T ss_pred eCC--CCchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEec
Confidence 765 333433 3344 899999999986 788999999997 99999986543111 112234444443321
Q ss_pred CCCcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 316 GWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.. ...+.++++++.++.+.+ ++++.|+++++.++|+.+..+... |+++
T Consensus 261 ~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 261 PD--GEQLAELAELVEAGKLRP--VVDRVFPLEDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred cc--HHHHHHHHHHHHCCCEEE--eeccEEcHHHHHHHHHHHHhCCCCCcEeC
Confidence 11 346778888888887543 356899999999999998877666 6653
No 120
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=4.9e-28 Score=225.25 Aligned_cols=300 Identities=21% Similarity=0.331 Sum_probs=234.2
Q ss_pred eEEEEecCCC--CeEEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCCC-----C------eEEEEEeeCCCCCCCCC
Q 017460 14 KAAVAWGAGQ--PLVVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQWP-----Q------CCRIVESVGPGVTEFNE 80 (371)
Q Consensus 14 ~a~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----~------~~G~V~~~G~~v~~~~~ 80 (371)
||+++...+. .+.+.+.+.|++.+++|+||+.++++|++|+..+.|.++ + ++|+|+.+|+++..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4566655543 377778888888999999999999999999988876542 1 69999999999999999
Q ss_pred CCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCC
Q 017460 81 GEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAP 160 (371)
Q Consensus 81 Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~ 160 (371)
||+|+... .. |+|++|+.++.+.++++|++++
T Consensus 81 G~~V~~~~------------------------------~~------------------~~~~~~~~~~~~~~~~ip~~~~ 112 (337)
T cd08275 81 GDRVMGLT------------------------------RF------------------GGYAEVVNVPADQVFPLPDGMS 112 (337)
T ss_pred CCEEEEec------------------------------CC------------------CeeeeEEEecHHHeEECCCCCC
Confidence 99999862 11 3799999999999999999999
Q ss_pred hhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceEeCC
Q 017460 161 LEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNP 238 (371)
Q Consensus 161 ~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg~~~vi~~ 238 (371)
..+++.+++++.++|+++.+..+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.+.++++|++.+++.
T Consensus 113 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 113 FEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVIDY 190 (337)
T ss_pred HHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEeeC
Confidence 99999999999999999877888999999999997 99999999999998 43 33322 34567888888999888877
Q ss_pred CCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC--Ceeec-------------c-hhe
Q 017460 239 NDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK--PEVAA-------------H-YGL 302 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~--~~~~~-------------~-~~~ 302 (371)
+ ..++.+.++..+++++|+++|++|+. .+..++++++++ |+++.+|..... ..... . ...
T Consensus 191 ~--~~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (337)
T cd08275 191 R--TQDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKL 266 (337)
T ss_pred C--CCcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHHH
Confidence 6 56788888887755899999999975 678899999997 999999865431 11110 0 111
Q ss_pred eeeccEEEecccCCCCcC-----CCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeC
Q 017460 303 FLSGRTLKGSLFGGWKPK-----TDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHM 369 (371)
Q Consensus 303 ~~~~~~i~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~ 369 (371)
+.++.++.++.+...... ..+.++++++.++.+.+. .++.|++++++++++.+.++... |+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 267 ISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred hhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 245777777654322111 125567777888876543 46889999999999999888777 888764
No 121
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=1.5e-28 Score=227.04 Aligned_cols=285 Identities=25% Similarity=0.296 Sum_probs=218.1
Q ss_pred EEEEeecCCCCCCcEEEEEeeecCCcchhhhhcCCC--------CC-----eEEEEEeeCCCCCCCCCCCEEEeeecCCC
Q 017460 26 VVEEVEVNPPQPEEIRIKVVCTSLCRSDITAWETQW--------PQ-----CCRIVESVGPGVTEFNEGEHVLTVFIGEC 92 (371)
Q Consensus 26 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~--------~~-----~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~ 92 (371)
++.+.+.|++.+++|+|+++++++|++|+..+.|.. +. ++|+|+++|++++.+.+||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 777889999999999999999999999998887754 11 6999999999999999999999873110
Q ss_pred CCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhh
Q 017460 93 KTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLS 172 (371)
Q Consensus 93 ~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~ 172 (371)
. .|+|++|+.++.+.++++|++++..+++.+++++.
T Consensus 94 --------------------------~------------------~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ 129 (319)
T cd08267 94 --------------------------G------------------GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL 129 (319)
T ss_pred --------------------------C------------------CceeeEEEEechhheEECCCCCCHHHHHhhhhHHH
Confidence 0 13799999999999999999999999999999999
Q ss_pred hHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHH
Q 017460 173 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKR 251 (371)
Q Consensus 173 ~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~ 251 (371)
+||+++.+...++++++|+|+|+ |.+|++++++|+..|+ +|++++++ ++.+.++++|++.+++.. ..++. +.
T Consensus 130 ~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~--~~~~~---~~ 202 (319)
T cd08267 130 TALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYT--TEDFV---AL 202 (319)
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCC--CCCcc---hh
Confidence 99999866667999999999996 9999999999999999 89988765 888888999998888765 33333 34
Q ss_pred HhCC-CccEEEEcCCCh-HHHHHHHHHhccCCceEEEecCCCCCCeeec---chheeeeccEEEecccCCCCcCCCHHHH
Q 017460 252 ITDG-GADYSFECIGDT-GMITTALQSCCDGWGLAVTLGVPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSL 326 (371)
Q Consensus 252 ~~~g-g~dvVid~~g~~-~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~---~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 326 (371)
.+.+ ++|+++|++++. ......+..++++ |+++.+|.......... ..........+....... . ...+.++
T Consensus 203 ~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 279 (319)
T cd08267 203 TAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP-N-AEDLEQL 279 (319)
T ss_pred ccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEecC-C-HHHHHHH
Confidence 4555 899999999852 2233444458896 99999987543222111 011111122222221111 1 3568888
Q ss_pred HHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 327 VNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 327 ~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
++++.++++.. +++++|+++++.++|+.+.++... |+++
T Consensus 280 ~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~vvv 319 (319)
T cd08267 280 AELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGKVVI 319 (319)
T ss_pred HHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCcEeC
Confidence 88998888654 356899999999999999887766 6653
No 122
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.97 E-value=3.8e-28 Score=220.68 Aligned_cols=274 Identities=21% Similarity=0.298 Sum_probs=220.0
Q ss_pred CcEEEEEeeecCCcchhhhhcCCC---CC-----eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccc
Q 017460 38 EEIRIKVVCTSLCRSDITAWETQW---PQ-----CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVL 109 (371)
Q Consensus 38 ~evlV~v~~~~i~~~D~~~~~g~~---~~-----~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~ 109 (371)
+||+||+.++++|++|++...|.. +. ++|+|+++|++++.+++||+|++.
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~---------------------- 58 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL---------------------- 58 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCCCCCCccceeeeEEEEeecCCccCCCCCCEEEEE----------------------
Confidence 589999999999999999888764 21 699999999999999999999986
Q ss_pred cccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCE
Q 017460 110 GLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGST 189 (371)
Q Consensus 110 ~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~ 189 (371)
.. |+|++|+.++.+.++++|++++..+++.+++++.+++.++.+...+++|++
T Consensus 59 ---------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~ 111 (293)
T cd05195 59 ---------AP------------------GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGES 111 (293)
T ss_pred ---------ec------------------CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCE
Confidence 22 379999999999999999999999999998999999999877788999999
Q ss_pred EEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC--CceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCC
Q 017460 190 VVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIG 265 (371)
Q Consensus 190 VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg--~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g 265 (371)
|+|+| +|.+|++++++++..|+ +++++.+++++.+.++++| ++.+++.+ ..++.+.+++++.+ ++|+++|+++
T Consensus 112 vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~ 188 (293)
T cd05195 112 VLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRATGGRGVDVVLNSLS 188 (293)
T ss_pred EEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHhCCCCceEEEeCCC
Confidence 99997 59999999999999999 8999999999999998888 67788775 55788888888877 9999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC---c---CCCHHHHHHHHHcCCCCCCc
Q 017460 266 DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK---P---KTDLPSLVNRYLKKEFMVDE 339 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~ 339 (371)
+. .+..++++++++ |+++.+|.........+....+.++.++....+..+. . ...+..+++++.++++.+
T Consensus 189 ~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 264 (293)
T cd05195 189 GE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKP-- 264 (293)
T ss_pred ch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCccc--
Confidence 86 789999999997 9999998654321111222222234444443222111 0 124567788888887653
Q ss_pred ceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 340 FITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 340 ~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
..++.|+++++.++++.+.++... |+++
T Consensus 265 ~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 265 LPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred CCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 345789999999999999887766 6653
No 123
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=1.3e-27 Score=216.90 Aligned_cols=270 Identities=20% Similarity=0.338 Sum_probs=216.5
Q ss_pred EEEeeecCCcchhhhhcCCCCC-------eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCccccccccc
Q 017460 42 IKVVCTSLCRSDITAWETQWPQ-------CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERR 114 (371)
Q Consensus 42 V~v~~~~i~~~D~~~~~g~~~~-------~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~ 114 (371)
||+.++++|++|++.+.|.++. ++|+|+++|++++.+++||+|+..
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~--------------------------- 54 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL--------------------------- 54 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------------
Confidence 8999999999999998876531 699999999999999999999986
Q ss_pred ccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEc
Q 017460 115 GVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFG 194 (371)
Q Consensus 115 g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~G 194 (371)
.+ |+|++|+.++.+.++++|++++..+++.+++++.++++++.+...+.+|++|+|+|
T Consensus 55 ----~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g 112 (288)
T smart00829 55 ----AP------------------GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHA 112 (288)
T ss_pred ----cC------------------CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEec
Confidence 22 37999999999999999999999999999999999999887778899999999998
Q ss_pred -cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--ceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHH
Q 017460 195 -LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--TEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMI 270 (371)
Q Consensus 195 -ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l 270 (371)
+|.+|+++++++++.|+ +|+++++++++.+.++++|+ +.+++++ ..++.+.+.+.+++ ++|+++|++++ ..+
T Consensus 113 ~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~vi~~~~~-~~~ 188 (288)
T smart00829 113 AAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRATGGRGVDVVLNSLAG-EFL 188 (288)
T ss_pred CCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHhCCCCcEEEEeCCCH-HHH
Confidence 49999999999999999 89999999999999999998 6778776 55677888888777 89999999986 578
Q ss_pred HHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC-----cCCCHHHHHHHHHcCCCCCCcceeeee
Q 017460 271 TTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK-----PKTDLPSLVNRYLKKEFMVDEFITHNL 345 (371)
Q Consensus 271 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~i~~~~ 345 (371)
..++++++++ |+++.+|..........+...+.++.++.+..+..+. ....+..+++++.++++.+. ..+.|
T Consensus 189 ~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 265 (288)
T smart00829 189 DASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVF 265 (288)
T ss_pred HHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEE
Confidence 8899999997 9999998653211112222222345555444322110 01235667778888876643 34789
Q ss_pred cchhHHHHHHHHHcCCee-eEEE
Q 017460 346 LFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 346 ~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
+++++.++++.+..+... |+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 266 PISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred cHHHHHHHHHHHhcCCCcceEeC
Confidence 999999999999887665 6653
No 124
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.96 E-value=3.1e-28 Score=238.45 Aligned_cols=283 Identities=19% Similarity=0.190 Sum_probs=238.6
Q ss_pred eEEEEeecC---CCCCCcEEEEEeeecCCcchhhhhcCCCCC-----------------eEEEEEeeCCCCCCCCCCCEE
Q 017460 25 LVVEEVEVN---PPQPEEIRIKVVCTSLCRSDITAWETQWPQ-----------------CCRIVESVGPGVTEFNEGEHV 84 (371)
Q Consensus 25 l~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-----------------~~G~V~~~G~~v~~~~~Gd~V 84 (371)
++|.+-|.. +..++.=+--|-|++||.+|+....|..++ |+|+ .+-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 778777754 236677788899999999999988887765 2443 4569999
Q ss_pred EeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEECCCCCChhhh
Q 017460 85 LTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVSSIAPLEKI 164 (371)
Q Consensus 85 ~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~P~~~~~~~a 164 (371)
++.. +.. ++++.+.++.+++|.+|+.+.+++|
T Consensus 1499 M~mv------------------------------pAk------------------sLATt~l~~rd~lWevP~~WTleeA 1530 (2376)
T KOG1202|consen 1499 MGMV------------------------------PAK------------------SLATTVLASRDFLWEVPSKWTLEEA 1530 (2376)
T ss_pred EEee------------------------------ehh------------------hhhhhhhcchhhhhhCCcccchhhc
Confidence 8873 222 6999999999999999999999999
Q ss_pred hhcchhhhhHHhHhhhhcCCCCCCEEEEE-ccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC----CceEeCCC
Q 017460 165 CLLSCGLSAGLGAAWNVADISKGSTVVIF-GLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG----VTEFLNPN 239 (371)
Q Consensus 165 a~~~~~~~~a~~~l~~~~~~~~~~~VlI~-Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg----~~~vi~~~ 239 (371)
+++|+.|+||||||..+..+++|+++||+ |+|++|++||.+|.+.|+ +|+.++.+.+|++++.++- ..++-|++
T Consensus 1531 stVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NSR 1609 (2376)
T KOG1202|consen 1531 STVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANSR 1609 (2376)
T ss_pred ccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhcccccc
Confidence 99999999999999999999999999999 579999999999999999 9999999999999986533 34566777
Q ss_pred CCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCC
Q 017460 240 DNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWK 318 (371)
Q Consensus 240 ~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~ 318 (371)
+.+|.+.+.+.|.| |+|+|++.... +.++.+++||+.. |||..+|-..-+...++....+++|.+++|.-+.+..
T Consensus 1610 --dtsFEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvm 1685 (2376)
T KOG1202|consen 1610 --DTSFEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVM 1685 (2376)
T ss_pred --cccHHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhhh
Confidence 78999999999999 99999999875 5799999999997 9999999766556667777888899999998766555
Q ss_pred cC--CCHHHHHHHHHcCCCC--CCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 319 PK--TDLPSLVNRYLKKEFM--VDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 319 ~~--~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
+. +.+.++..++.+|.-. .+|+-+++|+-.++++||+.|.+++++ ||||++.
T Consensus 1686 ege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr 1742 (2376)
T KOG1202|consen 1686 EGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVR 1742 (2376)
T ss_pred cCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEc
Confidence 42 4567778888777443 455667999999999999999999999 9999763
No 125
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.94 E-value=8.5e-25 Score=198.13 Aligned_cols=237 Identities=30% Similarity=0.396 Sum_probs=187.1
Q ss_pred eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceee
Q 017460 64 CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 143 (371)
Q Consensus 64 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 143 (371)
++|+|+++|++++.+++||+|+.. +.|++
T Consensus 28 ~~G~V~~vG~~v~~~~~Gd~V~~~---------------------------------------------------~~~~~ 56 (277)
T cd08255 28 SVGRVVEVGSGVTGFKPGDRVFCF---------------------------------------------------GPHAE 56 (277)
T ss_pred eeEEEEEeCCCCCCCCCCCEEEec---------------------------------------------------CCcce
Confidence 699999999999999999999976 26899
Q ss_pred EEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhh
Q 017460 144 YTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK 223 (371)
Q Consensus 144 ~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~ 223 (371)
|+.++.+.++++|++++..+++.+ +++.+|++++ ...++++++++||+|+|.+|++++++|+++|+++|+++++++++
T Consensus 57 ~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~ 134 (277)
T cd08255 57 RVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAAR 134 (277)
T ss_pred EEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHH
Confidence 999999999999999999999988 7899999987 57889999999999989999999999999999339999999999
Q ss_pred HHHHHHcC-CceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh
Q 017460 224 CEKAKAFG-VTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 301 (371)
Q Consensus 224 ~~~~~~lg-~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 301 (371)
.+.++++| ++.+++.. . ..+.+ ++|++||+++....+...+++++++ |+++.+|..... .......
T Consensus 135 ~~~~~~~g~~~~~~~~~--~--------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~-~~~~~~~ 202 (277)
T cd08255 135 RELAEALGPADPVAADT--A--------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWYGLK-PLLLGEE 202 (277)
T ss_pred HHHHHHcCCCccccccc--h--------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEeccCCC-ccccHHH
Confidence 99999999 55555442 1 12244 8999999998767789999999997 999999876442 1111111
Q ss_pred eeeeccEEEecccCCC---------CcCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCC--eeeEEE
Q 017460 302 LFLSGRTLKGSLFGGW---------KPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGK--CLRSVI 367 (371)
Q Consensus 302 ~~~~~~~i~g~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~--~~kvvi 367 (371)
...+..++.+...... ...+.+.++++++.++.+... +.++|+++++.+||+.+.+++ ..|+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 203 FHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEAL--ITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred HHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcccc--ccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 1123445555543221 112568889999999986543 468899999999999998773 337764
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.94 E-value=3.4e-24 Score=184.54 Aligned_cols=279 Identities=20% Similarity=0.245 Sum_probs=212.1
Q ss_pred CCCCCCcEEEEEeeecCCcchhhhhc---CC-----C-CC------eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCcc
Q 017460 33 NPPQPEEIRIKVVCTSLCRSDITAWE---TQ-----W-PQ------CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQ 97 (371)
Q Consensus 33 p~~~~~evlV~v~~~~i~~~D~~~~~---g~-----~-~~------~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~ 97 (371)
.++++++|+||.+|-+.++-..-... +. + +. -+|+|++. .-+++++||.|....
T Consensus 33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD~v~g~~--------- 101 (343)
T KOG1196|consen 33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGDLVWGIV--------- 101 (343)
T ss_pred CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEec--CCCCCCcCceEEEec---------
Confidence 45689999999999998864321111 11 1 11 28999984 556899999998862
Q ss_pred ccCCCCCCcccccccccccccCCCccceeccCcccccccCccceeeEEEeeCC--ceEECCC--CCChhhhh-hcchhhh
Q 017460 98 CKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSG--CAVKVSS--IAPLEKIC-LLSCGLS 172 (371)
Q Consensus 98 c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~--~~~~~P~--~~~~~~aa-~~~~~~~ 172 (371)
+|.||.++++. ..+++|. ++++.-.. ++..+..
T Consensus 102 ------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~gl 139 (343)
T KOG1196|consen 102 ------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGL 139 (343)
T ss_pred ------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchh
Confidence 59999999764 4555554 33333222 3455888
Q ss_pred hHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHH
Q 017460 173 AGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIK 250 (371)
Q Consensus 173 ~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~ 250 (371)
|||-.+++.+..++|++|+|-|| |++|+++.|+|+.+|+ +|+....+++|.+++ .+||.+.++||.+ +.+...+++
T Consensus 140 TAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~-e~~~~~aL~ 217 (343)
T KOG1196|consen 140 TAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKE-ESDLSAALK 217 (343)
T ss_pred HHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccC-ccCHHHHHH
Confidence 99999999999999999999985 9999999999999999 999999999999999 4579999999984 448888888
Q ss_pred HHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCCCC-----CeeecchheeeeccEEEecccCCCCcC--CCH
Q 017460 251 RITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLK-----PEVAAHYGLFLSGRTLKGSLFGGWKPK--TDL 323 (371)
Q Consensus 251 ~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~--~~~ 323 (371)
+....|+|+.||.+|+. .++..+..++.. ||++.+|..+.. ..+.-....+.+.+.+.|+....+.+. +-+
T Consensus 218 r~~P~GIDiYfeNVGG~-~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~l 295 (343)
T KOG1196|consen 218 RCFPEGIDIYFENVGGK-MLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFL 295 (343)
T ss_pred HhCCCcceEEEeccCcH-HHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHH
Confidence 88878999999999995 899999999996 999999976431 111111233456778888755544332 234
Q ss_pred HHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEEeCC
Q 017460 324 PSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVIHMP 370 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi~~~ 370 (371)
..+..++++|+|...+-+. -.|+..+.||.-|..++.. |.++++.
T Consensus 296 d~l~~~ikegKI~y~edi~--~Glen~P~A~vglf~GkNvGKqiv~va 341 (343)
T KOG1196|consen 296 DFLLPYIKEGKITYVEDIA--DGLENGPSALVGLFHGKNVGKQLVKVA 341 (343)
T ss_pred HHHHHHHhcCceEEehhHH--HHHhccHHHHHHHhccCcccceEEEee
Confidence 5677788899988765443 3799999999999999887 8888764
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.79 E-value=1.7e-19 Score=139.49 Aligned_cols=98 Identities=35% Similarity=0.566 Sum_probs=84.0
Q ss_pred CCcEEEEEeeecCCcchhhhhcCCCC-C----------eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCC
Q 017460 37 PEEIRIKVVCTSLCRSDITAWETQWP-Q----------CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNT 105 (371)
Q Consensus 37 ~~evlV~v~~~~i~~~D~~~~~g~~~-~----------~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~ 105 (371)
|+||+|||.+++||++|+++++|... . ++|+|+++|++++.|++||+|++.+...|+.|.+|..+++++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998311 1 699999999999999999999999988899999999999999
Q ss_pred cccccccccccccCCCccceeccCcccccccCccceeeEEEeeCCceEEC
Q 017460 106 CEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKV 155 (371)
Q Consensus 106 c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~~ 155 (371)
|.+....+.+ .+ |+||||+.+++++++|+
T Consensus 81 c~~~~~~g~~---~~------------------G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLG---LD------------------GGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTS---ST------------------CSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcC---CC------------------CcccCeEEEehHHEEEC
Confidence 9877764333 22 48999999999999985
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.72 E-value=6.4e-17 Score=129.31 Aligned_cols=127 Identities=28% Similarity=0.413 Sum_probs=110.1
Q ss_pred hHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHH
Q 017460 197 TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQ 275 (371)
Q Consensus 197 ~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~ 275 (371)
++|++++|+|+++|+ +|++++++++|++.++++|++++++++ +.++.+.+++++++ ++|+||||+|....++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~--~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYS--DDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETT--TSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhccccccccc--ccccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999997 999999999999999999999999997 66799999999998 99999999998789999999
Q ss_pred HhccCCceEEEecCCCCCCeeecchhee-eeccEEEecccCCCCcCCCHHHHHHHHH
Q 017460 276 SCCDGWGLAVTLGVPKLKPEVAAHYGLF-LSGRTLKGSLFGGWKPKTDLPSLVNRYL 331 (371)
Q Consensus 276 ~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 331 (371)
+++++ |+++.+|.... ....++...+ .+++++.|++.+. .++++++++++.
T Consensus 78 ~l~~~-G~~v~vg~~~~-~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la 129 (130)
T PF00107_consen 78 LLRPG-GRIVVVGVYGG-DPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLA 129 (130)
T ss_dssp HEEEE-EEEEEESSTST-SEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH
T ss_pred HhccC-CEEEEEEccCC-CCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhc
Confidence 99997 99999999872 4455554443 5699999998765 357888887764
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.47 E-value=1.5e-12 Score=122.02 Aligned_cols=175 Identities=17% Similarity=0.185 Sum_probs=132.8
Q ss_pred hHhhhhcC-CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhC
Q 017460 176 GAAWNVAD-ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 176 ~~l~~~~~-~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~ 254 (371)
.++.+..+ .-+|++|+|+|+|.+|+.+++.++.+|+ +|++++.++.|++.++.+|++.+ + ..+.+
T Consensus 190 ~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v----- 255 (413)
T cd00401 190 DGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV----- 255 (413)
T ss_pred HHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH-----
Confidence 33334333 3679999999999999999999999999 89999999999999999998532 1 11222
Q ss_pred CCccEEEEcCCChHHHHHH-HHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCCHH--HHHHHHH
Q 017460 255 GGADYSFECIGDTGMITTA-LQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLP--SLVNRYL 331 (371)
Q Consensus 255 gg~dvVid~~g~~~~l~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~--~~~~~~~ 331 (371)
.++|+||+++|....+... +..++++ |+++.+|.. ...++..... .+++++.++..... ..+++ ..+.++.
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId~~~L~-~~el~i~g~~~~~~--~~~~~~g~aI~LLa 329 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEIDVKGLK-ENAVEVVNIKPQVD--RYELPDGRRIILLA 329 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccCHHHHH-hhccEEEEccCCcc--eEEcCCcchhhhhh
Confidence 2689999999988778765 9999997 999999854 2334443332 35778877754321 22455 6899999
Q ss_pred cCCC-CCCcceeee-----ecch-hHHHHHHHHHcCCee--eEEEeCC
Q 017460 332 KKEF-MVDEFITHN-----LLFE-DINQAFNLMKEGKCL--RSVIHMP 370 (371)
Q Consensus 332 ~~~~-~~~~~i~~~-----~~~~-~~~~a~~~~~~~~~~--kvvi~~~ 370 (371)
+|++ ++...++|. |+|+ ++.++++.+.++... |+++.++
T Consensus 330 ~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 330 EGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred CcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9998 888888888 9999 999999999877653 7777653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.32 E-value=4.6e-11 Score=114.86 Aligned_cols=154 Identities=17% Similarity=0.174 Sum_probs=111.4
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCCCC-----------chHHHHHHH
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNN-----------EPVQQVIKR 251 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~~~-----------~~~~~~v~~ 251 (371)
..++++|+|+|+|++|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+.+ .++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5553211 133333333
Q ss_pred H-hC--CCccEEEEcCCCh-----HH-HHHHHHHhccCCceEEEecCCCC-CCeeecchhe-ee-eccEEEecccCCCCc
Q 017460 252 I-TD--GGADYSFECIGDT-----GM-ITTALQSCCDGWGLAVTLGVPKL-KPEVAAHYGL-FL-SGRTLKGSLFGGWKP 319 (371)
Q Consensus 252 ~-~~--gg~dvVid~~g~~-----~~-l~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~-~~-~~~~i~g~~~~~~~~ 319 (371)
. .+ +++|+||+|++.+ .. .++.++.++++ |+++.+|...+ .-..+.+... +. +++++.|.+. +.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--LP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--Cc-
Confidence 3 33 2799999999863 24 49999999998 99999987532 2123332222 23 6889988763 22
Q ss_pred CCCHHHHHHHHHcCCCCCCccee
Q 017460 320 KTDLPSLVNRYLKKEFMVDEFIT 342 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~i~ 342 (371)
.+....+.+++.++.+++.++++
T Consensus 317 ~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred hhHHHHHHHHHHhCCccHHHHhc
Confidence 22333588888888877666654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.15 E-value=1.1e-11 Score=98.44 Aligned_cols=120 Identities=18% Similarity=0.292 Sum_probs=74.9
Q ss_pred cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC--ChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeecc
Q 017460 230 FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG--DTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGR 307 (371)
Q Consensus 230 lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g--~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 307 (371)
||+++++|++ ..++ ...+++|+|||++| +...+..++++| ++ |+++.++. ....+... ....
T Consensus 1 LGAd~vidy~--~~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~----~~~~~~~~--~~~~ 64 (127)
T PF13602_consen 1 LGADEVIDYR--DTDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG----DLPSFARR--LKGR 64 (127)
T ss_dssp CT-SEEEETT--CSHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S----HHHHHHHH--HHCH
T ss_pred CCcCEEecCC--Cccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC----cccchhhh--hccc
Confidence 6999999997 4555 22349999999999 654446677778 97 99999974 00011110 1111
Q ss_pred EEEecccCCC---C-cCCCHHHHHHHHHcCCCCCCcceeeeecchhHHHHHHHHHcCCee-eEEE
Q 017460 308 TLKGSLFGGW---K-PKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCL-RSVI 367 (371)
Q Consensus 308 ~i~g~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-kvvi 367 (371)
.+....+... . ..+.+.++.+++.+|++++. +.++||++++.+|++.+++++.. |+||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 65 SIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 2222222110 0 12358899999999997765 77899999999999999999998 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.57 E-value=3.8e-07 Score=82.34 Aligned_cols=163 Identities=19% Similarity=0.238 Sum_probs=100.1
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcCCC-EEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhCC
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~-~vi~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~v~~~~~g 255 (371)
.+.++++++||.+|+|+ |..++++++..|.. +|++++.+++.++.+++. +...+-.. ..++. .+ .+.++
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~---~~d~~-~l-~~~~~ 145 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR---LGEIE-AL-PVADN 145 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE---Ecchh-hC-CCCCC
Confidence 45688999999999987 88888888887753 799999999998888663 33221100 11111 11 12234
Q ss_pred CccEEEEcC------CChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEEEecccCCCCcCCCHHHHHHH
Q 017460 256 GADYSFECI------GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNR 329 (371)
Q Consensus 256 g~dvVid~~------g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 329 (371)
.||+|+... .....++++++.|+++ |+++..+..... .+ +.. +.+...+.+..... .....++.++
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~~--~~~-~~~~~~~~~~~~~~---~~~~~e~~~~ 217 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-EL--PEE-IRNDAELYAGCVAG---ALQEEEYLAM 217 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-CC--CHH-HHHhHHHHhccccC---CCCHHHHHHH
Confidence 899998643 2235689999999998 999987654321 11 111 11122222111111 2345667777
Q ss_pred HHcCCCC-CCcceeeeecchhHHHHHHHH
Q 017460 330 YLKKEFM-VDEFITHNLLFEDINQAFNLM 357 (371)
Q Consensus 330 ~~~~~~~-~~~~i~~~~~~~~~~~a~~~~ 357 (371)
+.+..+. ........++++++.++++.+
T Consensus 218 l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 218 LAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHCCCCceEEEeccceecccHHHHHHHh
Confidence 7663333 222234568899999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.56 E-value=8.1e-07 Score=85.56 Aligned_cols=106 Identities=21% Similarity=0.293 Sum_probs=81.8
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCC-----------CCchHHHHHHHH
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPND-----------NNEPVQQVIKRI 252 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~-----------~~~~~~~~v~~~ 252 (371)
.++++|+|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+ ++..+ -..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457899999999999999999999999 89999999999999999998753 33211 012344444444
Q ss_pred hC---CCccEEEEcC---CChH---HHHHHHHHhccCCceEEEecCCCC
Q 017460 253 TD---GGADYSFECI---GDTG---MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 253 ~~---gg~dvVid~~---g~~~---~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+. .++|+||+|+ |.+. ..++.++.++++ +.++.++...+
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~G 288 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQG 288 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCC
Confidence 43 2799999999 5433 457789999998 99999986554
No 134
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.38 E-value=6.2e-06 Score=78.02 Aligned_cols=103 Identities=23% Similarity=0.351 Sum_probs=78.5
Q ss_pred HhHhhhhcCCC-CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHh
Q 017460 175 LGAAWNVADIS-KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 175 ~~~l~~~~~~~-~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~ 253 (371)
|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|.. +++ +.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal---- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA---- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH----
Confidence 44443332444 79999999999999999999999999 999999999887777666764 221 22221
Q ss_pred CCCccEEEEcCCChHHHH-HHHHHhccCCceEEEecCCCC
Q 017460 254 DGGADYSFECIGDTGMIT-TALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 254 ~gg~dvVid~~g~~~~l~-~~~~~l~~~~G~~v~~g~~~~ 292 (371)
.++|+||+++|....+. ..+..++++ +.++..|....
T Consensus 266 -~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d~ 303 (425)
T PRK05476 266 -ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFDN 303 (425)
T ss_pred -hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCCC
Confidence 26899999999876676 678889997 88888887643
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.29 E-value=2.3e-05 Score=71.36 Aligned_cols=96 Identities=20% Similarity=0.297 Sum_probs=75.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.+.+|+|+|.|.+|+.+++.++.+|+ +|+++++++++++.++++|+..+ .. . .+.+... ++|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~----~----~l~~~l~-~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL----S----ELAEEVG-KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH----H----HHHHHhC-CCCEEEECCC
Confidence 58999999999999999999999999 99999999999888888987532 11 1 1222222 6999999998
Q ss_pred ChHHHHHHHHHhccCCceEEEecCCCCC
Q 017460 266 DTGMITTALQSCCDGWGLAVTLGVPKLK 293 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~~G~~v~~g~~~~~ 293 (371)
.....+..++.++++ +.++.++...+.
T Consensus 220 ~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 220 ALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred hhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 643446777889997 999999876553
No 136
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.28 E-value=1.3e-05 Score=75.48 Aligned_cols=93 Identities=24% Similarity=0.392 Sum_probs=74.6
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
...|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...++..|+. +++ ..+.+ .+.|+||++
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal-----~~aDVVIta 257 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA-----KIGDIFITA 257 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----hcCCEEEEC
Confidence 3679999999999999999999999999 899999999887777777763 321 11222 257999999
Q ss_pred CCChHHHHH-HHHHhccCCceEEEecCCC
Q 017460 264 IGDTGMITT-ALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 264 ~g~~~~l~~-~~~~l~~~~G~~v~~g~~~ 291 (371)
+|....+.. .+..++++ +.++..|...
T Consensus 258 TG~~~vI~~~~~~~mK~G-ailiN~G~~~ 285 (406)
T TIGR00936 258 TGNKDVIRGEHFENMKDG-AIVANIGHFD 285 (406)
T ss_pred CCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence 998777764 88889997 8888887653
No 137
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.20 E-value=3.6e-07 Score=87.25 Aligned_cols=155 Identities=15% Similarity=0.152 Sum_probs=100.6
Q ss_pred eEEEEEeeCCCCCCCCCCCEEEeeecCCCCCCccccCCCCCCcccccccccccccCCCccceeccCcccccccCccceee
Q 017460 64 CCRIVESVGPGVTEFNEGEHVLTVFIGECKTCRQCKSDKSNTCEVLGLERRGVMHSDQQTRFSIKGKPVYHYCAVSSFSE 143 (371)
Q Consensus 64 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~c~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~a~ 143 (371)
+++.+.+|++++++ .|++.+.. |++|.+| ++.|......+..+ + +.|++
T Consensus 94 a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~g~~l---~------------------~lf~~ 142 (417)
T TIGR01035 94 AVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTVGKVL---E------------------RLFQK 142 (417)
T ss_pred HHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCchHHH---H------------------HHHHH
Confidence 57778888888766 66777777 8899888 56666555422211 1 37888
Q ss_pred EEEeeCCceEE---C-CCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcC
Q 017460 144 YTVVHSGCAVK---V-SSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 219 (371)
Q Consensus 144 ~~~~~~~~~~~---~-P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~ 219 (371)
++.+.. .+.. + +..++...+| .-.+ .+.....++++|+|+|+|.+|..+++.+...|+.+|+++.+
T Consensus 143 a~~~~k-~vr~~t~i~~~~vSv~~~A--------v~la-~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~r 212 (417)
T TIGR01035 143 AFSVGK-RVRTETDISAGAVSISSAA--------VELA-ERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANR 212 (417)
T ss_pred HHHHhh-hhhhhcCCCCCCcCHHHHH--------HHHH-HHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeC
Confidence 887765 3322 3 2223322221 1111 13334467899999999999999999999999669999999
Q ss_pred ChhhHH-HHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHH
Q 017460 220 NPEKCE-KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 269 (371)
Q Consensus 220 ~~~~~~-~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~ 269 (371)
+.++.. .++++|.. .++. .+..+.+ .++|+||+|++.+..
T Consensus 213 s~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 213 TYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred CHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCCc
Confidence 988855 56777764 2322 1222222 169999999987643
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.18 E-value=5.7e-06 Score=76.00 Aligned_cols=107 Identities=23% Similarity=0.284 Sum_probs=79.6
Q ss_pred ceEECCCCCChhhhhhcchhhhhHHhHhhhhcCC----CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhH-H
Q 017460 151 CAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADI----SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC-E 225 (371)
Q Consensus 151 ~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~----~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~-~ 225 (371)
.++++|+.+..+.++... +.++++.++ +.+.. .++.+|+|+|+|.+|..+++.++..|+++|+++++++++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 567789998888887775 677777775 33332 4689999999999999999999988877899999998875 5
Q ss_pred HHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHH
Q 017460 226 KAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 269 (371)
Q Consensus 226 ~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~ 269 (371)
+++++|.. +++. .++.+.+ ..+|+||.+++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l-----~~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELL-----NEADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHH-----hcCCEEEECCCCCch
Confidence 66888873 3322 1222222 158999999998654
No 139
>PLN02494 adenosylhomocysteinase
Probab=98.13 E-value=3.1e-05 Score=73.63 Aligned_cols=101 Identities=25% Similarity=0.370 Sum_probs=78.1
Q ss_pred HhHhhhhcCC-CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHh
Q 017460 175 LGAAWNVADI-SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 175 ~~~l~~~~~~-~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~ 253 (371)
+.++.+..++ -.|++|+|+|.|.+|+..++.++.+|+ +|+++++++.+...+...|.. +++ ..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~-vv~-------leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQ-VLT-------LEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCe-ecc-------HHHHHh---
Confidence 3334344343 569999999999999999999999999 999999999887777777765 221 222222
Q ss_pred CCCccEEEEcCCChHHH-HHHHHHhccCCceEEEecCC
Q 017460 254 DGGADYSFECIGDTGMI-TTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 254 ~gg~dvVid~~g~~~~l-~~~~~~l~~~~G~~v~~g~~ 290 (371)
..|+|+++.|....+ ...+..++++ +.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 579999999986554 7899999997 999999874
No 140
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.02 E-value=2.4e-05 Score=69.61 Aligned_cols=129 Identities=21% Similarity=0.234 Sum_probs=81.5
Q ss_pred ceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcC
Q 017460 140 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDT 219 (371)
Q Consensus 140 ~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~ 219 (371)
+|.+|.. +...++.+++++++..+.--. . ...+..+. ..+.++++||-+|+|. |..++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t-~~~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-T-RLCLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-H-HHHHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 3555533 556778888887766554211 1 11122221 1256889999999987 887776554 67757999999
Q ss_pred ChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhCC--CccEEEEcCCCh---HHHHHHHHHhccCCceEEEecCC
Q 017460 220 NPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG--GADYSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 220 ~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~v~~~~~g--g~dvVid~~g~~---~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
++...+.+++. +....+. +..+ .||+|+...... ..++.+.+.|+++ |.++..|..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~--------------~~~~~~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVY--------------LPQGDLKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEE--------------EccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988877553 2211010 1112 589998766543 2356788889998 999987654
No 141
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.93 E-value=0.00017 Score=68.85 Aligned_cols=93 Identities=25% Similarity=0.392 Sum_probs=73.1
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
.-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+. +. ++.+.+ ...|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~-~~-------~leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQ-VV-------TLEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCce-ec-------cHHHHH-----hcCCEEEEC
Confidence 4569999999999999999999999999 999998888877556556653 22 122222 168999999
Q ss_pred CCChHHHH-HHHHHhccCCceEEEecCCC
Q 017460 264 IGDTGMIT-TALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 264 ~g~~~~l~-~~~~~l~~~~G~~v~~g~~~ 291 (371)
+|....+. ..+..++++ +.++.+|...
T Consensus 317 tGt~~iI~~e~~~~MKpG-AiLINvGr~d 344 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN-AIVGNIGHFD 344 (476)
T ss_pred CCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence 98766664 889999997 9999998653
No 142
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.83 E-value=0.00016 Score=65.45 Aligned_cols=95 Identities=17% Similarity=0.264 Sum_probs=70.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+++|+|.|.+|.+++..++.+|+ +|++.++++++.+.+.++|.. .+.. .+ +.+.. .++|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~-~~~~----~~----l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLI-PFPL----NK----LEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-eecH----HH----HHHHh-ccCCEEEECCC
Confidence 47899999999999999999999999 999999999887777777753 2211 11 22222 26899999997
Q ss_pred ChHHHHHHHHHhccCCceEEEecCCCC
Q 017460 266 DTGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
..-.-...++.++++ ..++.+++...
T Consensus 219 ~~ii~~~~l~~~k~~-aliIDlas~Pg 244 (287)
T TIGR02853 219 ALVLTADVLSKLPKH-AVIIDLASKPG 244 (287)
T ss_pred hHHhCHHHHhcCCCC-eEEEEeCcCCC
Confidence 642224567778886 88888887654
No 143
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.80 E-value=0.00021 Score=67.25 Aligned_cols=99 Identities=18% Similarity=0.224 Sum_probs=69.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+. .++......... ...+ .+.. ..+|+||+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~-~~~l----~~~l-~~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN-AYEI----EDAV-KRADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC-HHHH----HHHH-ccCCEEEEcc
Confidence 34569999999999999999999999 8999999998887774 455532222220 1222 2222 2689999997
Q ss_pred C---C--hH-HHHHHHHHhccCCceEEEecCCCC
Q 017460 265 G---D--TG-MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 265 g---~--~~-~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+ . +. .-+..++.++++ +.++.++...+
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 3 2 11 136777889997 99999886544
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.78 E-value=0.00022 Score=72.86 Aligned_cols=138 Identities=21% Similarity=0.244 Sum_probs=88.4
Q ss_pred ceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEc
Q 017460 140 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD 218 (371)
Q Consensus 140 ~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~ 218 (371)
++++|..+++..++.+ +.++.+++..... ...+..+|+++||+|+ |++|.+.++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 4677777777777777 6666666642110 0122346899999985 9999999999999999 999999
Q ss_pred CChhhHHHH-HHcCC-----ceEeCCCCCCchHHHHHHHHh--CCCccEEEEcCCCh-----------------------
Q 017460 219 TNPEKCEKA-KAFGV-----TEFLNPNDNNEPVQQVIKRIT--DGGADYSFECIGDT----------------------- 267 (371)
Q Consensus 219 ~~~~~~~~~-~~lg~-----~~vi~~~~~~~~~~~~v~~~~--~gg~dvVid~~g~~----------------------- 267 (371)
++.++.+.+ +.++. ....|..+ .......+.+.. .+++|+||++.|..
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g 532 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATG 532 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHH
Confidence 998876655 33443 12235441 223333333332 23799999999821
Q ss_pred --HHHHHHHHHhcc---CCceEEEecCCC
Q 017460 268 --GMITTALQSCCD---GWGLAVTLGVPK 291 (371)
Q Consensus 268 --~~l~~~~~~l~~---~~G~~v~~g~~~ 291 (371)
..++.++..++. + |+++.+++..
T Consensus 533 ~~~l~~~~~~~l~~~~~~-g~iV~vsS~~ 560 (681)
T PRK08324 533 HFLVAREAVRIMKAQGLG-GSIVFIASKN 560 (681)
T ss_pred HHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence 123444555555 5 8899988754
No 145
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.76 E-value=3.8e-05 Score=76.67 Aligned_cols=80 Identities=23% Similarity=0.308 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC---------------------hhhHHHHHHcCCceEeCCCCC
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN---------------------PEKCEKAKAFGVTEFLNPNDN 241 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~---------------------~~~~~~~~~lg~~~vi~~~~~ 241 (371)
..++|++|+|+|+|+.|+++++.++..|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 46789999999999999999999999999 89988743 34567788899987776531
Q ss_pred CchH-HHHHHHHhCCCccEEEEcCCChH
Q 017460 242 NEPV-QQVIKRITDGGADYSFECIGDTG 268 (371)
Q Consensus 242 ~~~~-~~~v~~~~~gg~dvVid~~g~~~ 268 (371)
..+. .+.+ ..++|+||+++|...
T Consensus 211 ~~~~~~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 GEDITLEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred CCcCCHHHH----HhhCCEEEEeeCCCC
Confidence 0111 1111 227999999999753
No 146
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.68 E-value=8.5e-05 Score=71.28 Aligned_cols=88 Identities=23% Similarity=0.351 Sum_probs=62.8
Q ss_pred hhhhHHhHhhhhcC----CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHH-HHHHcCCceEeCCCCCCch
Q 017460 170 GLSAGLGAAWNVAD----ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCE-KAKAFGVTEFLNPNDNNEP 244 (371)
Q Consensus 170 ~~~~a~~~l~~~~~----~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~-~~~~lg~~~vi~~~~~~~~ 244 (371)
+.++++.++ +.+. ..++.+|+|+|+|.+|.++++.++..|+.+|+++.+++++.. +++++|.. +++. .+
T Consensus 162 ~~Sv~~~Av-~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~----~~ 235 (423)
T PRK00045 162 AVSVASAAV-ELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL----DE 235 (423)
T ss_pred CcCHHHHHH-HHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH----HH
Confidence 455666665 2222 257899999999999999999999999878999999988865 56778753 3322 12
Q ss_pred HHHHHHHHhCCCccEEEEcCCChH
Q 017460 245 VQQVIKRITDGGADYSFECIGDTG 268 (371)
Q Consensus 245 ~~~~v~~~~~gg~dvVid~~g~~~ 268 (371)
..+.+ .++|+||+|++.+.
T Consensus 236 ~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 236 LPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred HHHHh-----ccCCEEEECCCCCC
Confidence 22221 26899999998754
No 147
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=0.00035 Score=59.18 Aligned_cols=112 Identities=18% Similarity=0.231 Sum_probs=77.6
Q ss_pred hhhcchhhhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHcCCceEe-CC
Q 017460 164 ICLLSCGLSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGVTEFL-NP 238 (371)
Q Consensus 164 aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~----~~~~~~~lg~~~vi-~~ 238 (371)
.-++.-+...|. + .+...++++++||-+|+|+ |..++-+++..| +|+.+++.++ -++.++.+|...+. ..
T Consensus 52 gqtis~P~~vA~-m-~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~ 126 (209)
T COG2518 52 GQTISAPHMVAR-M-LQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRH 126 (209)
T ss_pred CceecCcHHHHH-H-HHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEE
Confidence 334443444444 2 3778899999999999874 899999999888 8999999887 33445778885432 22
Q ss_pred CCCCchHHHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEE-ec
Q 017460 239 NDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT-LG 288 (371)
Q Consensus 239 ~~~~~~~~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~-~g 288 (371)
.+.. ..+... .||.|+-+.+.+..=+..++.|+++ |+++. +|
T Consensus 127 gDG~-------~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 127 GDGS-------KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred CCcc-------cCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 1111 223333 8999988877765446788999998 99876 44
No 148
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.64 E-value=0.00023 Score=56.85 Aligned_cols=74 Identities=27% Similarity=0.391 Sum_probs=54.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc--eEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~--~vi~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
-++.++||+|+|++|.+++..+...|+++++++.|+.+|.+.+ +.++.. .++... ++.+.+ ..+|+||
T Consensus 10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~~~-----~~~DivI 80 (135)
T PF01488_consen 10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEEAL-----QEADIVI 80 (135)
T ss_dssp GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCHHH-----HTESEEE
T ss_pred cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHHHH-----hhCCeEE
Confidence 3589999999999999999999999998899999999987766 455322 234332 222111 1699999
Q ss_pred EcCCCh
Q 017460 262 ECIGDT 267 (371)
Q Consensus 262 d~~g~~ 267 (371)
.|++..
T Consensus 81 ~aT~~~ 86 (135)
T PF01488_consen 81 NATPSG 86 (135)
T ss_dssp E-SSTT
T ss_pred EecCCC
Confidence 999875
No 149
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.57 E-value=0.00051 Score=62.44 Aligned_cols=97 Identities=22% Similarity=0.288 Sum_probs=64.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCce-EeCCCCCCchHHHHHHHHhCCCcc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~~-vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
..++++||-+|+|+ |..++.+++ +|+.+|++++.++...+.+++. +... +.... .+ ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~---~~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKL---IY----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cc----cccccCCCce
Confidence 45789999999987 777777665 5766999999999887777542 2211 11110 01 1112234899
Q ss_pred EEEEcCCCh---HHHHHHHHHhccCCceEEEecCC
Q 017460 259 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 259 vVid~~g~~---~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
+|+...... ..+....+.|+++ |.++..|..
T Consensus 228 lVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 998765433 2456778899997 999887654
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.46 E-value=0.00091 Score=57.77 Aligned_cols=79 Identities=22% Similarity=0.329 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC----ceEeCCCCCCchHHHHHHHHhCC--Cc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV----TEFLNPNDNNEPVQQVIKRITDG--GA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~----~~vi~~~~~~~~~~~~v~~~~~g--g~ 257 (371)
+++.++|.|| +++|.+.++.+...|+ +|+.+.|+.++++.+ .+++. ...+|.++ .......+..+... .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 4578899997 8999999999999999 999999999999877 56772 23456652 34556666666655 69
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+.++..|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999998885
No 151
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.42 E-value=0.016 Score=52.51 Aligned_cols=139 Identities=14% Similarity=0.173 Sum_probs=84.3
Q ss_pred ceeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhh---cCCCCCCEEEEEcc-ChHHHHHHHHHH-HcCCCEE
Q 017460 140 SFSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNV---ADISKGSTVVIFGL-GTVGLSVAQGAK-ARGASRI 214 (371)
Q Consensus 140 ~~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~---~~~~~~~~VlI~Ga-g~~G~~ai~la~-~~G~~~v 214 (371)
.|-+|.++..+..+.- .....++..-| -+.|.|.. .+. -+.-..+.|+|..| +-.++..+..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 4667777765544311 22233333333 45566643 121 12333456777775 677887777777 4444488
Q ss_pred EEEcCChhhHHHHHHcCC-ceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 215 IGVDTNPEKCEKAKAFGV-TEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 215 i~~~~~~~~~~~~~~lg~-~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
+.++ +..++.+.+.+|. +.++.|+ ++..+....--+++|..|+...+..+-+.+...--..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd--------~i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYD--------DIDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehh--------hhhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9884 4556668899997 6788774 33334334667899999998777777777766423456666543
No 152
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.33 E-value=0.0034 Score=53.70 Aligned_cols=102 Identities=18% Similarity=0.279 Sum_probs=69.5
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HHcC-CceEeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKA----KAFG-VTEFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~----~~lg-~~~vi~~~~~~~~~~~~v~~~~ 253 (371)
....+.++++||.+|+|+ |.+++.+++..+. .+|++++.+++..+.+ +.+| .+.+.... .+..+.+.. .
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-~ 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-I 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-c
Confidence 456788999999999988 8889999887642 3899999999887765 4466 23222111 122222222 2
Q ss_pred CCCccEEEEcCCC---hHHHHHHHHHhccCCceEEEe
Q 017460 254 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~gg~dvVid~~g~---~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.+|.||...+. ...++.+.+.|+++ |+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 2379999985543 23577888899997 998753
No 153
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0062 Score=54.80 Aligned_cols=77 Identities=26% Similarity=0.388 Sum_probs=55.8
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHHHhC--CCccEEEEc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITD--GGADYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~v~~~~~--gg~dvVid~ 263 (371)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+..... +++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899986 9999999999988999 99999999888777766665433 45542 2344444444322 379999999
Q ss_pred CCC
Q 017460 264 IGD 266 (371)
Q Consensus 264 ~g~ 266 (371)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
No 154
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.19 E-value=0.0079 Score=52.74 Aligned_cols=103 Identities=22% Similarity=0.318 Sum_probs=67.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCceEe--CCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFL--NPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vi--~~~~~~~~~~~~v~~~~~--gg 256 (371)
++++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ .++ +..+.+ |..+ .....+.+.+... ++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSS-TESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4689999986 8999999999999999 999999998877655 222 222222 3331 2233333333221 36
Q ss_pred ccEEEEcCCChH-----------------------HHHHHHHHhccCCceEEEecCCC
Q 017460 257 ADYSFECIGDTG-----------------------MITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 257 ~dvVid~~g~~~-----------------------~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
+|.++.+.+... .++..+..+.++ |+++.+++..
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~ 138 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS 138 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence 899998887421 134455566676 8999887653
No 155
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.16 E-value=0.0033 Score=52.79 Aligned_cols=89 Identities=31% Similarity=0.423 Sum_probs=63.0
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
-.|.+|.|+|.|.+|+..++.++.+|+ +|++.+++..........+.. ..++.+.+. ..|+|+.+.
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~--------~~~l~ell~-----~aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE--------YVSLDELLA-----QADIVSLHL 99 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE--------ESSHHHHHH-----H-SEEEE-S
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce--------eeehhhhcc-----hhhhhhhhh
Confidence 358999999999999999999999999 999999988877655565542 113333333 378998877
Q ss_pred CChH-----HHHHHHHHhccCCceEEEec
Q 017460 265 GDTG-----MITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 265 g~~~-----~l~~~~~~l~~~~G~~v~~g 288 (371)
..+. .-...++.++++ ..+|.++
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~a 127 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVA 127 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESS
T ss_pred ccccccceeeeeeeeeccccc-eEEEecc
Confidence 6422 124667888886 7777764
No 156
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.15 E-value=0.0034 Score=59.37 Aligned_cols=108 Identities=17% Similarity=0.159 Sum_probs=73.2
Q ss_pred hhhHHhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHH
Q 017460 171 LSAGLGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIK 250 (371)
Q Consensus 171 ~~~a~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~ 250 (371)
-...+..+.+..+++++++||.+|+| .|..++.+++..|+ +|++++.+++..+.+++.....-+... ..++.
T Consensus 152 q~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~--~~D~~---- 223 (383)
T PRK11705 152 QEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIR--LQDYR---- 223 (383)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEE--ECchh----
Confidence 33444445577788999999999986 46778888888898 999999999999988764321111111 11221
Q ss_pred HHhCCCccEEEEc-----CCC---hHHHHHHHHHhccCCceEEEec
Q 017460 251 RITDGGADYSFEC-----IGD---TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 251 ~~~~gg~dvVid~-----~g~---~~~l~~~~~~l~~~~G~~v~~g 288 (371)
.+ .+.||.|+.. ++. ...++.+.+.|+++ |.++...
T Consensus 224 ~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~ 267 (383)
T PRK11705 224 DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT 267 (383)
T ss_pred hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 11 3479998753 333 23577888899998 9988754
No 157
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.13 E-value=0.0042 Score=57.12 Aligned_cols=100 Identities=20% Similarity=0.283 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~ 254 (371)
+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.++ ++|.+.+.... .+..+. ...
T Consensus 74 ~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~---~~~ 146 (322)
T PRK13943 74 EWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYG---VPE 146 (322)
T ss_pred HhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhc---ccc
Confidence 55678899999999998 49999999988763 36999999998766553 46665332221 122111 112
Q ss_pred -CCccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 255 -GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 255 -gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
+.+|+|+.+.+........++.|+++ |+++..
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 37999999888665566778899997 997763
No 158
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.07 E-value=0.0091 Score=50.58 Aligned_cols=101 Identities=23% Similarity=0.177 Sum_probs=64.3
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHHHhCC-Ccc
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRITDG-GAD 258 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~v~~~~~g-g~d 258 (371)
...+++|++||.+|+|+-+.+.....+..+..+|++++.++.+ +..++..+ .|.. +....+.+.+.... ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~--~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFT--DEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCC--ChhHHHHHHHHhCCCCcc
Confidence 4557899999999988756544444444344489999998854 11233322 2333 33444555555555 899
Q ss_pred EEEE-cC----CC------------hHHHHHHHHHhccCCceEEEec
Q 017460 259 YSFE-CI----GD------------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 259 vVid-~~----g~------------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
+|+. .. |. ...++.+.+.|+++ |+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 9995 21 21 24677888999997 9988753
No 159
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.06 E-value=0.0043 Score=50.52 Aligned_cols=92 Identities=23% Similarity=0.413 Sum_probs=61.4
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
+-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.+|-+.-.+.--|.. +. ...+.+ ...|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4578999999999999999999999999 999999999887777655653 22 122222 257999999
Q ss_pred CCChHHH-HHHHHHhccCCceEEEecCC
Q 017460 264 IGDTGMI-TTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 264 ~g~~~~l-~~~~~~l~~~~G~~v~~g~~ 290 (371)
+|....+ .+.+..++.+ -.+...|..
T Consensus 86 TG~~~vi~~e~~~~mkdg-ail~n~Gh~ 112 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG-AILANAGHF 112 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT-EEEEESSSS
T ss_pred CCCccccCHHHHHHhcCC-eEEeccCcC
Confidence 9976543 5778889985 555556654
No 160
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.05 E-value=0.0069 Score=50.29 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=69.3
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceEeCCCCCCchHHHHHHHHhCC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~v~~~~~g 255 (371)
...++++|+.++=+|+|. |..+++++...-..+|++++++++..+.. ++||.+.+.-.. .+..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~---g~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVE---GDAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEe---ccchHhhcCCC--
Confidence 355788999888788764 66677777544445999999999987765 568876433221 12222222211
Q ss_pred CccEEEEcCCC--hHHHHHHHHHhccCCceEEEecCC
Q 017460 256 GADYSFECIGD--TGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 256 g~dvVid~~g~--~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
.+|.+|=--|. +..++.++..|+++ |++|.-...
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 58998853332 23588999999998 999876554
No 161
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.05 E-value=0.0052 Score=55.47 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=56.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHHHHHHH---hCCCccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQVIKRI---TDGGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~~v~~~---~~gg~dvV 260 (371)
.+.+|||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+.+...+ .|..+ ...+.+.+... .++.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 4578999986 9999999998888999 99999999988887777665433 35542 22333333332 33479999
Q ss_pred EEcCC
Q 017460 261 FECIG 265 (371)
Q Consensus 261 id~~g 265 (371)
|.+.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99876
No 162
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.05 E-value=0.0047 Score=51.84 Aligned_cols=78 Identities=23% Similarity=0.345 Sum_probs=56.9
Q ss_pred CCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC---ceEeCCCCCCchHHHHHHHHhCC--CccE
Q 017460 186 KGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV---TEFLNPNDNNEPVQQVIKRITDG--GADY 259 (371)
Q Consensus 186 ~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~---~~vi~~~~~~~~~~~~v~~~~~g--g~dv 259 (371)
.|.+|||.| ++++|++.++-...+|= +||.+.|++++++.+++.-. ..+.|..+ .....+.+.++... ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc-hhhHHHHHHHHHhhCCchhe
Confidence 478999996 58999999999999997 99999999999999876443 34555542 22333334444333 6788
Q ss_pred EEEcCC
Q 017460 260 SFECIG 265 (371)
Q Consensus 260 Vid~~g 265 (371)
++++.|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 888776
No 163
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.02 E-value=0.0064 Score=51.03 Aligned_cols=93 Identities=22% Similarity=0.319 Sum_probs=64.0
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-CCCCCCchHHHHHHHHhCCCccEEEEcCCC-
Q 017460 190 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD- 266 (371)
Q Consensus 190 VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~v~~~~~gg~dvVid~~g~- 266 (371)
|+|+|+ |.+|...++.+...|. +|+++.|++++.+. ..+++.+. |.. +. +.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~~~~d~~--d~---~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEIIQGDLF--DP---DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEEEESCTT--CH---HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccccceeeeh--hh---hhhhhhhh-hcchhhhhhhhh
Confidence 789997 9999999999999998 99999999998877 44444332 332 22 33444333 79999999984
Q ss_pred ---hHHHHHHHHHhccC-CceEEEecCCC
Q 017460 267 ---TGMITTALQSCCDG-WGLAVTLGVPK 291 (371)
Q Consensus 267 ---~~~l~~~~~~l~~~-~G~~v~~g~~~ 291 (371)
.......++.++.. -.+++.++...
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccccceeeeccc
Confidence 22355556655443 13677766543
No 164
>PRK12742 oxidoreductase; Provisional
Probab=96.91 E-value=0.027 Score=49.28 Aligned_cols=77 Identities=19% Similarity=0.332 Sum_probs=49.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-HHcCCceE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~-~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
+++++||+|+ |++|.+.++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4789999986 9999999999989999 7777654 44544443 45565433 34431 1222232222 13699999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
No 165
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.91 E-value=0.011 Score=55.43 Aligned_cols=97 Identities=16% Similarity=0.157 Sum_probs=66.4
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC---Cc-eEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG---VT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg---~~-~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
.+|||+|+|.+|+.+++.+...|-.+|++.+++.++.+.+.+.. .. ..+|-. -.+++.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~-----d~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAA-----DVDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEeccc-----ChHHHHHHHh-cCCEEEEe
Confidence 47999999999999999988888459999999999999887664 32 344543 1223344433 46999999
Q ss_pred CCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 264 IGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 264 ~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
.+........-.|++.+ =.++......
T Consensus 76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTG-VDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence 98764443333445553 4566655443
No 166
>PRK06182 short chain dehydrogenase; Validated
Probab=96.88 E-value=0.0071 Score=54.39 Aligned_cols=79 Identities=20% Similarity=0.342 Sum_probs=56.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++++.+.+.++.. ..|..+ .+.+...+.+... +++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3678999986 8999999999888999 9999999988877665555543 235542 3334444444322 3799999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99873
No 167
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.86 E-value=0.017 Score=51.76 Aligned_cols=110 Identities=24% Similarity=0.316 Sum_probs=71.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E----eCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F----LNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v----i~~~~~~~~~~~~v~~~~~- 254 (371)
.|..|+|.|| +++|.+.+.-.-..|+ +++.+.+..++++.+ ++.+... + .|..+ .++..+.+.+...
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~-~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD-EESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC-HHHHHHHHHHHHHh
Confidence 4788999997 8999988888888899 777777777766655 4555433 2 24442 3444555443332
Q ss_pred -CCccEEEEcCCCh-------------------------HHHHHHHHHhccCC-ceEEEecCCCCCCeee
Q 017460 255 -GGADYSFECIGDT-------------------------GMITTALQSCCDGW-GLAVTLGVPKLKPEVA 297 (371)
Q Consensus 255 -gg~dvVid~~g~~-------------------------~~l~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 297 (371)
|++|+.++..|-. ...+.++..|++.. |+++.+++..+...++
T Consensus 89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 4899999987742 12345555565543 9999998877644433
No 168
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=96.84 E-value=0.014 Score=51.78 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=57.7
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H----cCCc-eE--eCCCCCCchHHHHHHH-Hh
Q 017460 184 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FGVT-EF--LNPNDNNEPVQQVIKR-IT 253 (371)
Q Consensus 184 ~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~----lg~~-~v--i~~~~~~~~~~~~v~~-~~ 253 (371)
...+.++||+|| +++|...+..+...|+ +++.+.|+.+|++.+. + .|.. .+ +|.. +.+-...+.. +.
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs--~~~~~~~l~~~l~ 79 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLS--DPEALERLEDELK 79 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCC--ChhHHHHHHHHHH
Confidence 356789999997 8999999999999999 9999999999988772 2 3332 23 3655 3333334433 32
Q ss_pred -CC-CccEEEEcCCC
Q 017460 254 -DG-GADYSFECIGD 266 (371)
Q Consensus 254 -~g-g~dvVid~~g~ 266 (371)
.+ .+|+.+++.|-
T Consensus 80 ~~~~~IdvLVNNAG~ 94 (265)
T COG0300 80 ERGGPIDVLVNNAGF 94 (265)
T ss_pred hcCCcccEEEECCCc
Confidence 23 79999999985
No 169
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.022 Score=49.81 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC---CceE--eCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VTEF--LNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg---~~~v--i~~~~~~~~~~~~v~~~~~--gg 256 (371)
.+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +++. -.+. .|..+ ...+.+.+.+... ++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRD-EADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999986 9999999888888899 899999988776554 3332 1122 24331 3334444444322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998763
No 170
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.83 E-value=0.01 Score=50.13 Aligned_cols=80 Identities=20% Similarity=0.311 Sum_probs=59.1
Q ss_pred CCCEEEEEc-c-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce-EeCCCC--CCchHHHHHHHHhCCCccE
Q 017460 186 KGSTVVIFG-L-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE-FLNPND--NNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 186 ~~~~VlI~G-a-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~-vi~~~~--~~~~~~~~v~~~~~gg~dv 259 (371)
+...|||.| + |++|.+.+.-...-|+ .|+++.|+-++...+. ++|... =+|..+ +-..+..+++..++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 456799997 4 9999998888888899 9999999988877764 777632 233332 1233566777777889999
Q ss_pred EEEcCCC
Q 017460 260 SFECIGD 266 (371)
Q Consensus 260 Vid~~g~ 266 (371)
.++..|-
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9997764
No 171
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.79 E-value=0.0047 Score=51.32 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=65.1
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-CCCCC--------------CchHHHHHHH
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDN--------------NEPVQQVIKR 251 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~~~~~--------------~~~~~~~v~~ 251 (371)
..+|+|+|+|.+|+-|+.+++.+|+ +|++.+..+++.+..+.++...+. .+.+. ...+...+.+
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 4789999999999999999999999 999999999999888888875432 21110 1223333333
Q ss_pred HhCCCccEEEEcCC--C---hH-HHHHHHHHhccCCceEEEecC
Q 017460 252 ITDGGADYSFECIG--D---TG-MITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 252 ~~~gg~dvVid~~g--~---~~-~l~~~~~~l~~~~G~~v~~g~ 289 (371)
... .+|+||-+.- + +. .-++.++.++++ ..++.+.-
T Consensus 99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~ 140 (168)
T PF01262_consen 99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISC 140 (168)
T ss_dssp HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTG
T ss_pred HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEe
Confidence 221 4788885331 1 11 135667888886 77777754
No 172
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.78 E-value=0.021 Score=56.24 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=67.2
Q ss_pred hhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---------cCC-----ceE--eCCCCCC
Q 017460 180 NVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---------FGV-----TEF--LNPNDNN 242 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---------lg~-----~~v--i~~~~~~ 242 (371)
...+.+.|.+|||+|+ |.+|...++.+...|+ +|+++.++.++.+.+.+ .|. ..+ .|.. +
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt--D 149 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE--K 149 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC--C
Confidence 4566778999999986 9999999999988999 99999999887754421 121 112 2443 1
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChH---------------HHHHHHHHhcc-CCceEEEecCCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTG---------------MITTALQSCCD-GWGLAVTLGVPK 291 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~---------------~l~~~~~~l~~-~~G~~v~~g~~~ 291 (371)
.+.+.+.. +++|+||.+.|... ....+++.+.. +.++||.+++..
T Consensus 150 ---~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 150 ---PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred ---HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 12233333 37999999987521 11223333332 226899887654
No 173
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.75 E-value=0.018 Score=47.68 Aligned_cols=97 Identities=19% Similarity=0.296 Sum_probs=63.5
Q ss_pred hhcchhhhhHHhHhhhhcCCCCCCEEEEEccCh-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 165 CLLSCGLSAGLGAAWNVADISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 165 a~~~~~~~~a~~~l~~~~~~~~~~~VlI~Gag~-~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
...|+...++...+.+...--.+.+|||+|+|. +|..++..++..|+ +|+++.++.+.
T Consensus 22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~-------------------- 80 (168)
T cd01080 22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN-------------------- 80 (168)
T ss_pred CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh--------------------
Confidence 444544444444443333345789999999986 69989999999999 88888765321
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
..+.+. .+|+||.+++.+..+.. +.++++ -.++.++...
T Consensus 81 -l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~pr 119 (168)
T cd01080 81 -LKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGINR 119 (168)
T ss_pred -HHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCCC
Confidence 111121 48999999998654333 346665 6677787654
No 174
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.73 E-value=0.019 Score=44.52 Aligned_cols=100 Identities=17% Similarity=0.246 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc--eEeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT--EFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~--~vi~~~~~~~~~~~~v~~~~ 253 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.++ .++.. .++..+ ... .... .
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~--~~~---~~~~-~ 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD--APE---ALED-S 85 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc--ccc---cChh-h
Confidence 445667788999999876 888888888775449999999998877764 34432 222211 111 0111 1
Q ss_pred CCCccEEEEcCCCh---HHHHHHHHHhccCCceEEEe
Q 017460 254 DGGADYSFECIGDT---GMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~gg~dvVid~~g~~---~~l~~~~~~l~~~~G~~v~~ 287 (371)
...+|+|+-..+.. ..++.+.+.|+++ |.++.-
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 13799998755332 3578899999997 998764
No 175
>PRK04148 hypothetical protein; Provisional
Probab=96.73 E-value=0.013 Score=46.25 Aligned_cols=94 Identities=21% Similarity=0.223 Sum_probs=63.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.++.+++++|.| .|...+..+...|. .|++++.+++..+.+++.+.+.+.+.-. +.++ .. .+++|+|+..-
T Consensus 15 ~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf-~p~~----~~--y~~a~liysir 85 (134)
T PRK04148 15 GKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF-NPNL----EI--YKNAKLIYSIR 85 (134)
T ss_pred ccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC-CCCH----HH--HhcCCEEEEeC
Confidence 456889999999 78755656667898 9999999999999999988765553211 1111 11 12789999988
Q ss_pred CChHHHHHHHHHhccCCceEEEe
Q 017460 265 GDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
..++..+..++..++-...++..
T Consensus 86 pp~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 86 PPRDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE
Confidence 87766555566554431344433
No 176
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.031 Score=48.80 Aligned_cols=79 Identities=22% Similarity=0.279 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHH----HHHcCCceE-eCCCCCCchHHHHHHHHhC--CCc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEK----AKAFGVTEF-LNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~----~~~lg~~~v-i~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
++.++||+|+ |.+|...++.+...|+ +|+.+++++++... +...+...+ .|..+ ..++.+.+..... +++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 3789999986 9999999998888899 89999997765432 222333322 24331 2233333333322 379
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+||.+.+.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
No 177
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.71 E-value=0.012 Score=57.63 Aligned_cols=74 Identities=22% Similarity=0.272 Sum_probs=55.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEE
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 262 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid 262 (371)
.+.++++|+|+|.|..|++++.+++..|+ +|++.+.++.+.+.++++|+.. +... ...+.+ ..+|+|+.
T Consensus 8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~----~~~~~l-----~~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTS----DAVQQI-----ADYALVVT 76 (488)
T ss_pred cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCc----chHhHh-----hcCCEEEE
Confidence 35578999999999999999999999999 9999998777776677888743 3221 111112 15799999
Q ss_pred cCCCh
Q 017460 263 CIGDT 267 (371)
Q Consensus 263 ~~g~~ 267 (371)
+.|-+
T Consensus 77 SpGi~ 81 (488)
T PRK03369 77 SPGFR 81 (488)
T ss_pred CCCCC
Confidence 88864
No 178
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.032 Score=51.89 Aligned_cols=79 Identities=27% Similarity=0.276 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|...++.+...|+ +|+++.+++++.+.+ ++.|... ..|..+ .....+.+..... +
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4678999986 9999999999988999 899999988776543 3445432 235541 2233333333222 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 179
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.64 E-value=0.084 Score=45.33 Aligned_cols=104 Identities=16% Similarity=0.130 Sum_probs=65.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.|.+|||+|+|.+|..-+..+...|+ +|++++.... ....+.+.|--..+... .. .+.+ .++++||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~~---~~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLARC---FD-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeCC---CC-HHHh-----CCcEEEEECC
Confidence 36799999999999999999999999 8888866543 33333344422233221 11 1111 2799999999
Q ss_pred CChHHHHHHHHHhccCCceEEEecCCCCCCeeecch
Q 017460 265 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHY 300 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 300 (371)
+.+..-.......+.. |..+...+......+-++.
T Consensus 78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa 112 (205)
T TIGR01470 78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPS 112 (205)
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEee
Confidence 9864444555555554 7777665443334444443
No 180
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.63 E-value=0.019 Score=54.74 Aligned_cols=76 Identities=18% Similarity=0.216 Sum_probs=55.1
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
-.+.+|||+|+|.+|.+++..+...|+++++++.|+.+|.+.+ .+++...++. + +.+.... ..+|+||.|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~-~~l~~~l-~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------L-SELPQLI-KKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------H-HHHHHHh-ccCCEEEEC
Confidence 4578999999999999999999999987899999998876655 5565222222 2 1222222 258999999
Q ss_pred CCChHH
Q 017460 264 IGDTGM 269 (371)
Q Consensus 264 ~g~~~~ 269 (371)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998653
No 181
>PRK14967 putative methyltransferase; Provisional
Probab=96.62 E-value=0.12 Score=45.04 Aligned_cols=96 Identities=18% Similarity=0.182 Sum_probs=62.9
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-eEeCCCCCCchHHHHHHHHhCC
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-EFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~vi~~~~~~~~~~~~v~~~~~g 255 (371)
...++++++||-.|+|. |..++.+++. |+.+|++++.+++..+.+++ .+.. .++.. ++.+. +..+
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~---~~~~ 100 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARA---VEFR 100 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhh---ccCC
Confidence 34577889999999987 8888888875 55599999999987776543 3432 22222 22221 1223
Q ss_pred CccEEEEcCCC---------------------------hHHHHHHHHHhccCCceEEEe
Q 017460 256 GADYSFECIGD---------------------------TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 256 g~dvVid~~g~---------------------------~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.||+|+...+. ...+..+.+.|+++ |+++.+
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 89999875320 11345677888997 998765
No 182
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.043 Score=48.98 Aligned_cols=79 Identities=19% Similarity=0.324 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT-E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||.|+ |++|.+.+..+...|+ +|++++++.++.+.+ ++++.. . ..|..+ ..++.+.+..... +.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999986 8999999999888999 999999988765544 445532 1 235442 2333343333322 3789
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998873
No 183
>PRK08017 oxidoreductase; Provisional
Probab=96.60 E-value=0.017 Score=51.21 Aligned_cols=77 Identities=27% Similarity=0.425 Sum_probs=55.0
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE-eCCCCCCchHHH---HHHHHhCCCccEEEE
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF-LNPNDNNEPVQQ---VIKRITDGGADYSFE 262 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v-i~~~~~~~~~~~---~v~~~~~gg~dvVid 262 (371)
+++||+|+ |.+|.+.++.+...|+ +|+++.+++++.+.++++++..+ .|..+ ...+.+ .+.....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 47999997 9999999999998999 99999999998888877776543 34431 222222 222223347888888
Q ss_pred cCCC
Q 017460 263 CIGD 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8763
No 184
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.59 E-value=0.046 Score=48.21 Aligned_cols=101 Identities=20% Similarity=0.222 Sum_probs=61.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh-hHHH----HHHcCCc-e--EeCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEK----AKAFGVT-E--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~-~~~~----~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+. ++..+.. . ..|..+ .+.....+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 4678999986 9999999998888899 8888877653 3222 2233332 1 235441 2233333333322
Q ss_pred CCccEEEEcCCCh-------------------HHHHHHHHHhccCCceEEEecC
Q 017460 255 GGADYSFECIGDT-------------------GMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 255 gg~dvVid~~g~~-------------------~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
+++|++|.+.+.. ..++.+...+... |+++.+++
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2689998877542 1334455555555 88888865
No 185
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.012 Score=54.73 Aligned_cols=79 Identities=24% Similarity=0.378 Sum_probs=54.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHh--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRIT--DG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~--~g 255 (371)
+++++||+|+ |++|.+.++.+...|+ +|+++.+++++++.+ ++.|.+. ..|..+ .+...+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4689999986 8999999999999999 899999998877543 4456542 235441 222222222221 24
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999873
No 186
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.53 E-value=0.021 Score=51.26 Aligned_cols=70 Identities=16% Similarity=0.106 Sum_probs=50.8
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCceEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
+...+.+++|+|+|+.+.+++..+...|+++|+++.|+++|.+.+. .++.. . .+.+ ....+|+||
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----~-------~~~~---~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----W-------RPDL---GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----c-------hhhc---ccccCCEEE
Confidence 3445678999999999999999999999978999999998877663 34311 1 0111 112689999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
+|+..
T Consensus 184 NaTp~ 188 (272)
T PRK12550 184 NVTPI 188 (272)
T ss_pred ECCcc
Confidence 99863
No 187
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.51 E-value=0.021 Score=43.10 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=59.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
+|.+|||+|+|.+|..-++.+...|+ +|+++.... +.++ +.-..... .+.+. -.++++|+-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~~-----~~~~~-----l~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIRR-----EFEED-----LDGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEES-----S-GGG-----CTTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHhh-----hHHHH-----HhhheEEEecCC
Confidence 47899999999999999999999999 999997775 2222 22122211 22111 127999999999
Q ss_pred ChHHHHHHHHHhccCCceEEEecCCCCCCee
Q 017460 266 DTGMITTALQSCCDGWGLAVTLGVPKLKPEV 296 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~ 296 (371)
.+..-+...+..+.. |..+.........++
T Consensus 70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF 99 (103)
T PF13241_consen 70 DPELNEAIYADARAR-GILVNVVDDPELCDF 99 (103)
T ss_dssp -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence 875555555555655 888888665443333
No 188
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.021 Score=49.67 Aligned_cols=77 Identities=22% Similarity=0.312 Sum_probs=52.6
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--EeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+++++-.. .+|..+ .+.+.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 46899986 9999998888888899 9999999888776665543222 234431 22333333434334899999887
Q ss_pred CC
Q 017460 265 GD 266 (371)
Q Consensus 265 g~ 266 (371)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 53
No 189
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.49 E-value=0.011 Score=52.74 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=72.2
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--EeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
..+|.|+|.|.+|.-|+.+|.-+|+ +|...+.+.+|+..+..+-..+ +.-++ ..++.+.+. +.|++|.++
T Consensus 168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st--~~~iee~v~-----~aDlvIgaV 239 (371)
T COG0686 168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST--PSNIEEAVK-----KADLVIGAV 239 (371)
T ss_pred CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC--HHHHHHHhh-----hccEEEEEE
Confidence 3468888999999999999999999 9999999999999987644333 22222 445555544 579998865
Q ss_pred C--Ch----HHHHHHHHHhccCCceEEEecCCCC
Q 017460 265 G--DT----GMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 265 g--~~----~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
= +. -..++.++.++++ +.++.+....+
T Consensus 240 LIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 240 LIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 2 21 1367889999997 99998876544
No 190
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.48 E-value=0.012 Score=53.33 Aligned_cols=76 Identities=13% Similarity=0.105 Sum_probs=52.1
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-EeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
++.++||+|+|+.+.+++..+..+|+++++++.|+.+|.+.+ ++++... +.... ..+.+.... ..+|+||+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~-----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE-----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc-----chhhhhhcc-cCCCEEEEC
Confidence 578999999999999999999999998999999998887766 3443211 11110 001111111 268999999
Q ss_pred CCCh
Q 017460 264 IGDT 267 (371)
Q Consensus 264 ~g~~ 267 (371)
++..
T Consensus 198 Tp~g 201 (282)
T TIGR01809 198 VPAD 201 (282)
T ss_pred CCCC
Confidence 8753
No 191
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.48 E-value=0.1 Score=44.65 Aligned_cols=104 Identities=14% Similarity=0.045 Sum_probs=62.2
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.|.+|||+|+|.+|...+..+...|+ +|+++.....+ ...+.+-+.-..... .+.+. .-.++|+||-++
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~~~~~-----~~~~~----~l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIRWKQK-----EFEPS----DIVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEEEEec-----CCChh----hcCCceEEEEcC
Confidence 47899999999999999988888998 88888654322 222222222112111 11110 002789999999
Q ss_pred CChHHHHHHHHHhccCCceEEEecCCCCCCeeecchh
Q 017460 265 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYG 301 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~ 301 (371)
+++. ++..+...+.. +.++...+......+-++..
T Consensus 79 ~d~e-lN~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~ 113 (202)
T PRK06718 79 NDPR-VNEQVKEDLPE-NALFNVITDAESGNVVFPSA 113 (202)
T ss_pred CCHH-HHHHHHHHHHh-CCcEEECCCCccCeEEEeeE
Confidence 9864 56555555554 66776655444344444433
No 192
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.46 E-value=0.0094 Score=51.55 Aligned_cols=99 Identities=21% Similarity=0.353 Sum_probs=66.4
Q ss_pred hhhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHH
Q 017460 179 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKR 251 (371)
Q Consensus 179 ~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~v~~ 251 (371)
.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++ +|... ++..+ .. ..
T Consensus 69 ~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd--~~------~~ 139 (212)
T PRK13942 69 CELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGD--GT------LG 139 (212)
T ss_pred HHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC--cc------cC
Confidence 3566789999999999874 6667777777653 399999999987766643 45432 22211 00 01
Q ss_pred HhC-CCccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 252 ITD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 252 ~~~-gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
+.. +.||+|+-........+..++.|+++ |+++..
T Consensus 140 ~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 140 YEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred CCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 112 37999876554445567888899998 998764
No 193
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.42 E-value=0.054 Score=52.60 Aligned_cols=78 Identities=19% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh--hHH-HHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCE-KAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~--~~~-~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||+|+ |++|...++.+...|+ +|+++++... +.+ ...+++... .+|..+ .......+..... +++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999986 9999999999989999 8888877432 222 234455432 345541 2222232222222 2799
Q ss_pred EEEEcCC
Q 017460 259 YSFECIG 265 (371)
Q Consensus 259 vVid~~g 265 (371)
++|.+.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999988
No 194
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.41 E-value=0.0072 Score=58.69 Aligned_cols=94 Identities=14% Similarity=0.167 Sum_probs=63.1
Q ss_pred hhcCCCCCCEEE----EEc-cChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVV----IFG-LGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~Vl----I~G-ag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~ 253 (371)
...++++|+++| |+| +|++|.+++|+++..|+ .|+++.+.+.+....+..+.. .++|.+ ...+.+.+..++
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~--~~~~~~~l~~~~ 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDAT--GITDPADLKALY 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECC--CCCCHHHHHHHH
Confidence 456678888887 776 59999999999999999 999987766655444444444 355554 333344443321
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 254 DGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 254 ~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
..++..++.+.++ |+++.++...
T Consensus 104 --------------~~~~~~l~~l~~~-griv~i~s~~ 126 (450)
T PRK08261 104 --------------EFFHPVLRSLAPC-GRVVVLGRPP 126 (450)
T ss_pred --------------HHHHHHHHhccCC-CEEEEEcccc
Confidence 2455667777776 8888877643
No 195
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.019 Score=50.47 Aligned_cols=75 Identities=23% Similarity=0.399 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++.+.+ ..++... ..|.. +.. .+.+... +++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~--~~~---~v~~~~~~~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVG--DDA---AIRAALAAAGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCC--CHH---HHHHHHHHhCCCCEE
Confidence 4678999986 8999999999999999 899999988777655 3345432 23544 222 2222222 379999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 82 i~~ag~ 87 (245)
T PRK07060 82 VNCAGI 87 (245)
T ss_pred EECCCC
Confidence 998874
No 196
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.40 E-value=0.0093 Score=45.56 Aligned_cols=91 Identities=25% Similarity=0.261 Sum_probs=60.8
Q ss_pred CCCEEEEEccChHHHHHHHHHH-HcCCCEEEEEcCChhhHHHHHHc----CC-ce--EeCCCCCCchHHHHHHHHhCCCc
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKAKAF----GV-TE--FLNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~-~~G~~~vi~~~~~~~~~~~~~~l----g~-~~--vi~~~~~~~~~~~~v~~~~~gg~ 257 (371)
|+.+||-+|+|. |..++.+++ ..++ +|++++.+++..+.+++. +. +. ++.. ++ . ......++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-----d~-~-~~~~~~~~~ 71 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG-----DA-E-FDPDFLEPF 71 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-----CC-H-GGTTTSSCE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-----cc-c-cCcccCCCC
Confidence 578999999875 777778887 4677 999999999988887542 22 11 2221 12 0 011112279
Q ss_pred cEEEEcC-CCh---------HHHHHHHHHhccCCceEEE
Q 017460 258 DYSFECI-GDT---------GMITTALQSCCDGWGLAVT 286 (371)
Q Consensus 258 dvVid~~-g~~---------~~l~~~~~~l~~~~G~~v~ 286 (371)
|+|+... ... ..++...+.|+++ |+++.
T Consensus 72 D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi 109 (112)
T PF12847_consen 72 DLVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVI 109 (112)
T ss_dssp EEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred CEEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEE
Confidence 9999877 221 1377888899997 98875
No 197
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.40 E-value=0.054 Score=46.83 Aligned_cols=104 Identities=18% Similarity=0.193 Sum_probs=65.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh-------------------hHHHH----HHcCCc-eEeCCCCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-------------------KCEKA----KAFGVT-EFLNPNDN 241 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~-------------------~~~~~----~~lg~~-~vi~~~~~ 241 (371)
+..+|+|+|.|++|-+++..+-..|+.++..++-++- |.+.+ ++.... ++.-.+
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-- 106 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-- 106 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH--
Confidence 3578999999999999999999999988888875441 11111 222221 121111
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCChHH-HHHHHHHhccCCceEEEecCCCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGDTGM-ITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~~~~-l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
..-..+.+.++...++|+||||..+-.. ...+..|.+.. -.+|..+...+
T Consensus 107 ~f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag~ 157 (263)
T COG1179 107 DFITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAGG 157 (263)
T ss_pred hhhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeeccccC
Confidence 1122444556666699999999975322 44555677764 67777765544
No 198
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.021 Score=52.16 Aligned_cols=79 Identities=24% Similarity=0.323 Sum_probs=55.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC--ce-E--eCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--TE-F--LNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~--~~-v--i~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |++|.+.++.+...|+ +|+++.++.++.+.+ ++++. .. . .|..+ .....+.+.+... ++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 4789999986 9999999999999999 999999988876654 44542 11 1 45541 2333333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999884
No 199
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.39 E-value=0.026 Score=48.55 Aligned_cols=99 Identities=17% Similarity=0.207 Sum_probs=65.3
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCc---eEeCCCCCCchHHHHHHH
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIKR 251 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~---~vi~~~~~~~~~~~~v~~ 251 (371)
+...++++++||-+|+|. |..++.+++..+ ..+|++++.+++-.+.++ +++.. .++..+ ..+.+.
T Consensus 66 ~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d-----~~~~~~- 138 (205)
T PRK13944 66 ELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD-----GKRGLE- 138 (205)
T ss_pred HhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC-----cccCCc-
Confidence 566788999999999864 667777777664 238999999988666553 34532 222211 111110
Q ss_pred HhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 252 ITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 252 ~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
..+.||.|+-+.......+..++.|+++ |+++..
T Consensus 139 -~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 139 -KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred -cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 1237999987766555567788999998 998763
No 200
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.38 E-value=0.027 Score=50.05 Aligned_cols=79 Identities=27% Similarity=0.387 Sum_probs=53.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
++++|||+|+ |++|...++.+...|+ +|+++++++.+.+.+ .+++... ..|..+ ...+.+.+.+... +++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999986 9999999999988999 999999988776544 4454422 234441 2233333333322 378999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998863
No 201
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=96.38 E-value=0.0092 Score=53.64 Aligned_cols=45 Identities=31% Similarity=0.426 Sum_probs=40.2
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA 229 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~ 229 (371)
.+++++||+|+|+.+.+++.-++..|+++++++.|+.+|.+.+.+
T Consensus 124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 358999999999999999999999998899999999999777643
No 202
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.36 E-value=0.051 Score=49.00 Aligned_cols=102 Identities=24% Similarity=0.334 Sum_probs=63.1
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhCCCcc
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
-.++|.+||=+|+|+ |.++|..+ .+|+++|++++.++--.+.++ ..+.+..+... .+ .......++.||
T Consensus 159 ~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~----~~-~~~~~~~~~~~D 231 (300)
T COG2264 159 LLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAK----GF-LLLEVPENGPFD 231 (300)
T ss_pred hhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcc----cc-cchhhcccCccc
Confidence 356899999998764 55555444 468879999999987655553 34544211000 00 011112224899
Q ss_pred EEEEcCCCh---HHHHHHHHHhccCCceEEEecCCCC
Q 017460 259 YSFECIGDT---GMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 259 vVid~~g~~---~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+|+-.+=.+ ...+.....++++ |++++.|....
T Consensus 232 vIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~ 267 (300)
T COG2264 232 VIVANILAEVLVELAPDIKRLLKPG-GRLILSGILED 267 (300)
T ss_pred EEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence 998766332 1345677789997 99999986644
No 203
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.36 E-value=0.071 Score=46.56 Aligned_cols=91 Identities=22% Similarity=0.321 Sum_probs=60.5
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCC--EEEEEcCC----hhh--------HHHHHHcCCceEeCCCCCCchHHHHHH
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGAS--RIIGVDTN----PEK--------CEKAKAFGVTEFLNPNDNNEPVQQVIK 250 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~--~vi~~~~~----~~~--------~~~~~~lg~~~vi~~~~~~~~~~~~v~ 250 (371)
-++.+++|+|+|+.|.+++..+...|++ +++.++++ .++ .++++.++... . ..++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 4578999999999999999988889997 89999998 443 33445443211 1 112333332
Q ss_pred HHhCCCccEEEEcCCChHHH-HHHHHHhccCCceEEEec
Q 017460 251 RITDGGADYSFECIGDTGMI-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 251 ~~~~gg~dvVid~~g~~~~l-~~~~~~l~~~~G~~v~~g 288 (371)
++|++|.+++.. .+ +..++.++++ ..++.+.
T Consensus 97 -----~~dvlIgaT~~G-~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 97 -----GADVFIGVSRPG-VVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred -----cCCEEEeCCCCC-CCCHHHHHhhCCC-CEEEEeC
Confidence 489999999732 33 4566777775 5555544
No 204
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.36 E-value=0.0065 Score=52.24 Aligned_cols=102 Identities=22% Similarity=0.331 Sum_probs=65.7
Q ss_pred hhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCC-EEEEEcCChhhHHHH----HHcCCceE-eCCCCCCchHHHHHHHH
Q 017460 179 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGAS-RIIGVDTNPEKCEKA----KAFGVTEF-LNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 179 ~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~-~vi~~~~~~~~~~~~----~~lg~~~v-i~~~~~~~~~~~~v~~~ 252 (371)
.+...+++|++||-+|+|+ |..++-+++..|.. +|+.+++.++-.+.+ +.+|...+ +... + . ..-+
T Consensus 65 l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g--d-g----~~g~ 136 (209)
T PF01135_consen 65 LEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG--D-G----SEGW 136 (209)
T ss_dssp HHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----G----GGTT
T ss_pred HHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc--c-h----hhcc
Confidence 3667799999999999874 78888888877743 689999988754444 55676432 1111 1 1 0111
Q ss_pred hC-CCccEEEEcCCChHHHHHHHHHhccCCceEEE-ecC
Q 017460 253 TD-GGADYSFECIGDTGMITTALQSCCDGWGLAVT-LGV 289 (371)
Q Consensus 253 ~~-gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~-~g~ 289 (371)
.. +.||.|+-+.+.+..-...++.|+++ |++|. ++.
T Consensus 137 ~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~pi~~ 174 (209)
T PF01135_consen 137 PEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAPIGQ 174 (209)
T ss_dssp GGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEEESS
T ss_pred ccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEEEcc
Confidence 22 38999998887765556788899998 99887 554
No 205
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.35 E-value=0.09 Score=49.68 Aligned_cols=98 Identities=20% Similarity=0.249 Sum_probs=66.8
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHH-HHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK-AKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~-~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
-.+.++||+|+|-+|..++..+...|+.+|+...|+.+|... ++++|+. ++..+ +..+.+. .+|+||.+
T Consensus 176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~----el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE----ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH----HHHHhhh-----hCCEEEEe
Confidence 367899999999999999999999998899999999998765 4789854 33221 1222221 58999999
Q ss_pred CCChHH---HHHHHHHhccCCc-eEEEecCCCC
Q 017460 264 IGDTGM---ITTALQSCCDGWG-LAVTLGVPKL 292 (371)
Q Consensus 264 ~g~~~~---l~~~~~~l~~~~G-~~v~~g~~~~ 292 (371)
++.+.. .......++.... -++.++.+..
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 987642 2233334444323 3566766543
No 206
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.31 E-value=0.0098 Score=53.46 Aligned_cols=98 Identities=19% Similarity=0.245 Sum_probs=60.3
Q ss_pred hhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc---eEeCCCCCCchHHHHHH
Q 017460 178 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIK 250 (371)
Q Consensus 178 l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~---~vi~~~~~~~~~~~~v~ 250 (371)
+.+++++++|++||-+|+| -|-+++.+++..|+ +|++++.+++..+.++ +.|.. .+... ++ +
T Consensus 54 ~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~----~ 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DY----R 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-T-TSHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------G----G
T ss_pred HHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ec----c
Confidence 4578899999999999987 46677888888899 9999999999887763 45642 12211 11 1
Q ss_pred HHhCCCccEEEE-----cCCC---hHHHHHHHHHhccCCceEEEec
Q 017460 251 RITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 251 ~~~~gg~dvVid-----~~g~---~~~l~~~~~~l~~~~G~~v~~g 288 (371)
++. +.||.|+. .+|. +..++.+.+.|+|+ |+++.-.
T Consensus 123 ~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~ 166 (273)
T PF02353_consen 123 DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT 166 (273)
T ss_dssp G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 111 17888865 3432 23477888899998 9987543
No 207
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.30 E-value=0.074 Score=47.22 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH---cCCc-e--EeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA---FGVT-E--FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~---lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |++|...+..+...|+ +|+++.+++++.+..++ .+.. . ..|..+ ...+...+.+... ++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD-DAQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcCC
Confidence 3678999986 8999999888888999 88888888877644433 3432 1 224431 2223333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 8999999883
No 208
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.29 E-value=0.11 Score=42.56 Aligned_cols=90 Identities=19% Similarity=0.255 Sum_probs=56.7
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|||+|+|.+|.--++.+...|+ +|.++. ++..+.+++++...+. .+ .+.+. .-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~----~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QK----TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ec----ccChh----cCCCceEEEECCC
Confidence 47899999999999998888888999 888883 3333444455432222 11 11110 0127899999998
Q ss_pred ChHHHHHHHHHhccCCceEEEecC
Q 017460 266 DTGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
+++ ++..+...+.. +.++....
T Consensus 80 d~e-~N~~i~~~a~~-~~~vn~~d 101 (157)
T PRK06719 80 QHA-VNMMVKQAAHD-FQWVNVVS 101 (157)
T ss_pred CHH-HHHHHHHHHHH-CCcEEECC
Confidence 864 56666656554 44555433
No 209
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.26 E-value=0.049 Score=47.63 Aligned_cols=106 Identities=20% Similarity=0.208 Sum_probs=72.7
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhCC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~v~~~~~g 255 (371)
......+|++||=+|+| .|-.|+.+++..|-.+|++++.++..++.+++ .|... +..- ..-++.+. +.+.
T Consensus 45 ~~~~~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv---~~dAe~LP-f~D~ 118 (238)
T COG2226 45 SLLGIKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFV---VGDAENLP-FPDN 118 (238)
T ss_pred HhhCCCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEE---EechhhCC-CCCC
Confidence 44556689999988776 48899999999986699999999998888754 23221 1110 00111111 2223
Q ss_pred CccEEEEcCCC------hHHHHHHHHHhccCCceEEEecCCCC
Q 017460 256 GADYSFECIGD------TGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 256 g~dvVid~~g~------~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
.||+|.-+.|- +..|++..+.|+|+ |+++.+.....
T Consensus 119 sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p 160 (238)
T COG2226 119 SFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKP 160 (238)
T ss_pred ccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCC
Confidence 89999776663 24689999999998 99998876543
No 210
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.25 E-value=0.031 Score=49.59 Aligned_cols=80 Identities=19% Similarity=0.287 Sum_probs=53.6
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCC-ceE--eCCCCCCchHHHHHHHHh--C
Q 017460 185 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGV-TEF--LNPNDNNEPVQQVIKRIT--D 254 (371)
Q Consensus 185 ~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~-~~v--i~~~~~~~~~~~~v~~~~--~ 254 (371)
..++++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+.+ .+. ..+ .|..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 34789999986 9999999999988999 89999999887655422 121 122 24431 233434333332 1
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|++|.+.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 378999998873
No 211
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.24 E-value=0.0075 Score=54.60 Aligned_cols=96 Identities=23% Similarity=0.372 Sum_probs=58.1
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce-E-eCCCCCCchHHHHHHHHhCCCc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE-F-LNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~-v-i~~~~~~~~~~~~v~~~~~gg~ 257 (371)
..+|++||=+|+|+ |.+++..++ +|+++|++++.++.-.+.+++ .|... + +... .+ ...+.|
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~---~~-------~~~~~~ 226 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS---ED-------LVEGKF 226 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT---SC-------TCCS-E
T ss_pred ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe---cc-------cccccC
Confidence 67889999998653 444444444 588899999999976655533 44321 2 1111 11 112489
Q ss_pred cEEEEcCCChHH---HHHHHHHhccCCceEEEecCCCC
Q 017460 258 DYSFECIGDTGM---ITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 258 dvVid~~g~~~~---l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
|+|+-..-.+-. +....+.++++ |.+++.|....
T Consensus 227 dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~~ 263 (295)
T PF06325_consen 227 DLVVANILADVLLELAPDIASLLKPG-GYLILSGILEE 263 (295)
T ss_dssp EEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEGG
T ss_pred CEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccHH
Confidence 999977765422 33445578887 99999887644
No 212
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.23 E-value=0.064 Score=49.44 Aligned_cols=95 Identities=12% Similarity=0.148 Sum_probs=61.6
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-CCCCCCchHHHHHHHHhCCCccEEEEcCCC
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
+|||+|+ |.+|...+..+...|. +|.+++|+.++...+...+++.+. |.. +. +.+.+... ++|+||.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~--d~---~~l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLS--LP---ETLPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCC--CH---HHHHHHHC-CCCEEEECCCC
Confidence 6999986 9999999999888998 999999988776666666665433 433 21 22333332 68999998753
Q ss_pred hH------------HHHHHHHHhccC-CceEEEecCC
Q 017460 267 TG------------MITTALQSCCDG-WGLAVTLGVP 290 (371)
Q Consensus 267 ~~------------~l~~~~~~l~~~-~G~~v~~g~~ 290 (371)
.. .....++.++.. -.+++.+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 75 RPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 11 112344444443 1378877664
No 213
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.035 Score=49.85 Aligned_cols=78 Identities=24% Similarity=0.316 Sum_probs=53.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG-VTE-FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++ +.. ..|..+ .+.+.+.+..... +++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999986 9999999988888899 899999988877654 4454 222 235542 2333333333322 379999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 998873
No 214
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.075 Score=46.79 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ ++.+.. . ..|..+ .......+.+... +
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4788999986 9999999999988999 899998888765543 233332 1 224441 2222222222222 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999875
No 215
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.031 Score=49.54 Aligned_cols=79 Identities=22% Similarity=0.293 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eEeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----EFLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~----~vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||+|+ |.+|...++.+...|+ +|+.+.++++..+...++... ...|..+ ...+...+.+... +++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999986 9999999888888999 899999887765555444221 1234431 2233333333322 3789
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99998874
No 216
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.093 Score=47.09 Aligned_cols=76 Identities=24% Similarity=0.337 Sum_probs=49.8
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc--e--EeCCCCCCchHHHHHHHHhC--CCc
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT--E--FLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~--~--vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
+++|+|+ |++|...++.+...|+ +|+++.+++++.+.+ +..+.. . ..|..+ .....+.+.+... +++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899986 9999999998888999 899998887765443 333432 1 245541 2223333333322 379
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|++|.+.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 217
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=96.21 E-value=0.035 Score=49.60 Aligned_cols=103 Identities=17% Similarity=0.210 Sum_probs=72.6
Q ss_pred HhHhhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-e--E--eCCCCCCchH
Q 017460 175 LGAAWNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-E--F--LNPNDNNEPV 245 (371)
Q Consensus 175 ~~~l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~--v--i~~~~~~~~~ 245 (371)
+..+.++.++++|++||=+|+|- |.+++-.|+..|+ +|+.++-+++..+.++ +.|.. . + .|++ ++
T Consensus 61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~r----d~ 134 (283)
T COG2230 61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYR----DF 134 (283)
T ss_pred HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccc----cc
Confidence 33456889999999999999875 6678888888899 9999999999877664 45654 1 1 1332 11
Q ss_pred HHHHHHHhCCCccEEEE-----cCCC---hHHHHHHHHHhccCCceEEEecCCCC
Q 017460 246 QQVIKRITDGGADYSFE-----CIGD---TGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 246 ~~~v~~~~~gg~dvVid-----~~g~---~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
.+.||-|+. .+|. +.-+..+.+.|+++ |++.+......
T Consensus 135 --------~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~ 180 (283)
T COG2230 135 --------EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGP 180 (283)
T ss_pred --------ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCC
Confidence 114676643 4554 23477888899998 99987765544
No 218
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=96.20 E-value=0.027 Score=54.94 Aligned_cols=77 Identities=23% Similarity=0.375 Sum_probs=55.4
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceEeCCCCCCch
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDNNEP 244 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~~~~ 244 (371)
.+++|+|+|+|+.|+.++..++..|+ .|++++..+ ...+.++++|++..++... ..+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v-~~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV-GRD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe-CCc
Confidence 57899999999999999999999999 888887654 2456678899876555431 011
Q ss_pred HHHHHHHHhCCCccEEEEcCCCh
Q 017460 245 VQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 245 ~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
+ .+..+. .++|.||.++|..
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~ 237 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTY 237 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCC
Confidence 1 111221 2699999999974
No 219
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.038 Score=49.25 Aligned_cols=81 Identities=21% Similarity=0.343 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcc-C-hHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----H-cCCceE----eCCCCCCchHHHHHHHH
Q 017460 184 ISKGSTVVIFGL-G-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FGVTEF----LNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 184 ~~~~~~VlI~Ga-g-~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~-lg~~~v----i~~~~~~~~~~~~v~~~ 252 (371)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++.+... + ++...+ .|..+ ...+...+...
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 445789999986 6 799999999999999 8999988887665442 2 443222 25441 22333333332
Q ss_pred hC--CCccEEEEcCCC
Q 017460 253 TD--GGADYSFECIGD 266 (371)
Q Consensus 253 ~~--gg~dvVid~~g~ 266 (371)
.. +++|++|.+.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 21 378999999984
No 220
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.19 E-value=0.052 Score=49.83 Aligned_cols=92 Identities=21% Similarity=0.416 Sum_probs=61.8
Q ss_pred CEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCC
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
.+|.|+|+|.+|.+.+..++..|. .+|+++++++++.+.+++.|....+.. +..+.+ ..+|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-----~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-----SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-----CHHHHh-----cCCCEEEECCCH
Confidence 579999999999999888888774 389999999999888888875321111 111111 268999999986
Q ss_pred hHH---HHHHHHHhccCCceEEEecCC
Q 017460 267 TGM---ITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 267 ~~~---l~~~~~~l~~~~G~~v~~g~~ 290 (371)
... ++.....++++ ..++.+|+.
T Consensus 77 ~~~~~v~~~l~~~l~~~-~iv~dvgs~ 102 (307)
T PRK07502 77 GASGAVAAEIAPHLKPG-AIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHhhCCCC-CEEEeCccc
Confidence 422 23333345564 556666553
No 221
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.045 Score=47.49 Aligned_cols=77 Identities=21% Similarity=0.276 Sum_probs=53.1
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
+++||+|+ |.+|...++.+...|+ +|+++++++++.+.++..+.. ...|..+ ...+...+....++++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 46889985 9999998888878899 899999998887777666653 2335542 223333322332237999999876
Q ss_pred C
Q 017460 266 D 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 4
No 222
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.15 E-value=0.049 Score=46.68 Aligned_cols=35 Identities=31% Similarity=0.411 Sum_probs=31.3
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
.+.+|+|+|+|++|..++..+...|+.++..++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 35789999999999999999999999899999876
No 223
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.14 E-value=0.043 Score=50.71 Aligned_cols=79 Identities=18% Similarity=0.294 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H----cC-Cc---eEeCCCCCCchHHHHHHHHhCC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A----FG-VT---EFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~----lg-~~---~vi~~~~~~~~~~~~v~~~~~g 255 (371)
.|.++||+|+ +++|.+.+..+...|+ +|+.+++++++.+.+. + .+ .. ..+|..++..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999996 8999998888878899 8999999998876542 2 22 11 1234432113344455555555
Q ss_pred -CccEEEEcCC
Q 017460 256 -GADYSFECIG 265 (371)
Q Consensus 256 -g~dvVid~~g 265 (371)
.+|+++++.|
T Consensus 131 ~didilVnnAG 141 (320)
T PLN02780 131 LDVGVLINNVG 141 (320)
T ss_pred CCccEEEEecC
Confidence 6779999876
No 224
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.13 E-value=0.041 Score=44.76 Aligned_cols=74 Identities=24% Similarity=0.285 Sum_probs=50.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-EeCCCCCCchHHHHHHHHhCCCccEEEE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-FLNPNDNNEPVQQVIKRITDGGADYSFE 262 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-vi~~~~~~~~~~~~v~~~~~gg~dvVid 262 (371)
.++.+++|+|+|.+|...++.+...|..+|+++++++++.+.+ ++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 4578899999999999999888888644899999998876654 5555421 01111 11111 137999999
Q ss_pred cCCCh
Q 017460 263 CIGDT 267 (371)
Q Consensus 263 ~~g~~ 267 (371)
+++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 99764
No 225
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.13 E-value=0.062 Score=48.31 Aligned_cols=95 Identities=19% Similarity=0.337 Sum_probs=65.2
Q ss_pred hcchhhhhHHhHhhhhcC-CCCCCEEEEEccCh-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVAD-ISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~-~~~~~~VlI~Gag~-~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+||.....+..+ +..+ --.|.+|+|+|.|. +|.-++.++...|+ .|+++.+...
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~--------------------- 193 (286)
T PRK14175 137 FVPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSK--------------------- 193 (286)
T ss_pred CCCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch---------------------
Confidence 4555544444444 4444 24689999999865 99999999999999 8888865421
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|...
T Consensus 194 ~l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~ 233 (286)
T PRK14175 194 DMASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP 233 (286)
T ss_pred hHHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence 1222222 58999999998765554 457886 7788888753
No 226
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.12 E-value=0.12 Score=45.90 Aligned_cols=77 Identities=22% Similarity=0.228 Sum_probs=52.2
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cC-C--c-eEeCCCCCCchHHHHHHHHh---CCCcc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG-V--T-EFLNPNDNNEPVQQVIKRIT---DGGAD 258 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg-~--~-~vi~~~~~~~~~~~~v~~~~---~gg~d 258 (371)
.++||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+ ++ . . ..+|..+ ...+.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 46899986 9999999998888899 99999998887766533 32 1 1 1235542 233333333322 34899
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99998874
No 227
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=96.11 E-value=0.032 Score=56.74 Aligned_cols=76 Identities=25% Similarity=0.339 Sum_probs=56.2
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceEeCCCCC-Cc
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDN-NE 243 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~---------------------~~~~~~~lg~~~vi~~~~~-~~ 243 (371)
.+++|+|+|+|+.|+.++..+...|+ +|+++++.+. +.+.++++|++..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8999987652 4566788998766654310 11
Q ss_pred hHHHHHHHHhCCCccEEEEcCCCh
Q 017460 244 PVQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
.+ ..+. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 1221 2699999999863
No 228
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.039 Score=49.32 Aligned_cols=79 Identities=15% Similarity=0.241 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. ..+.. .+ .|..+ .......+.+... +
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4789999986 8999999999988999 9999999887765442 22322 12 34441 2223223333222 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 229
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.10 E-value=0.031 Score=49.28 Aligned_cols=79 Identities=22% Similarity=0.338 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC--Cc---eEeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG--VT---EFLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg--~~---~vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ..+. .. ...|..+ ...+...+.+... +.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSD-EADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCC
Confidence 4678999986 9999999988888899 899999998776554 2222 21 1224431 2334343333322 27
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|+||.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 230
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.033 Score=49.56 Aligned_cols=81 Identities=21% Similarity=0.271 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc----eEeCCCCCCchHHHHHHHHhC--C
Q 017460 184 ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT----EFLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 184 ~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~----~vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.-++.++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+.+ +.-. ...|..+ .....+.+.+... +
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 356789999986 9999999999989999 89999998776665533 2211 1234431 2223232332211 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+||.+.|.
T Consensus 86 ~~d~vi~~ag~ 96 (264)
T PRK12829 86 GLDVLVNNAGI 96 (264)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 231
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.08 E-value=0.042 Score=49.06 Aligned_cols=78 Identities=22% Similarity=0.282 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc-e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT-E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++.. . ..|..+ ..+....+.+... +.+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS-YADNQRAVDQTVDAFGKLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC-HHHHHHHHHHHHHhcCCCC
Confidence 4788999986 8999999999888999 8999999888776654 34321 1 224431 2333444444322 3799
Q ss_pred EEEEcCC
Q 017460 259 YSFECIG 265 (371)
Q Consensus 259 vVid~~g 265 (371)
++|.+.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999887
No 232
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.07 E-value=0.041 Score=49.11 Aligned_cols=78 Identities=21% Similarity=0.270 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc-e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+ .+.. . ..|..+ .....+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4788999986 8999999998888999 99999998877666644 3321 1 124431 2334444444332 3789
Q ss_pred EEEEcCC
Q 017460 259 YSFECIG 265 (371)
Q Consensus 259 vVid~~g 265 (371)
++|.+.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999876
No 233
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.05 E-value=0.038 Score=46.66 Aligned_cols=96 Identities=18% Similarity=0.200 Sum_probs=60.6
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhCCCcc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~-G~~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
++++.+||-+|+|. |..++.+++.. ++ +|++++.+++..+.++ +.+.+.+ ... ..+..+ +.. .+.+|
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~--~~d~~~-~~~--~~~fD 114 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVV--HGRAEE-FGQ--EEKFD 114 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEE--eccHhh-CCC--CCCcc
Confidence 45588999998764 55566666544 55 9999999998776663 4554321 111 112211 111 23899
Q ss_pred EEEEcCCC--hHHHHHHHHHhccCCceEEEec
Q 017460 259 YSFECIGD--TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 259 vVid~~g~--~~~l~~~~~~l~~~~G~~v~~g 288 (371)
+|+-.... ...++.+.+.|+++ |+++.+-
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 99864322 24577888999998 9998773
No 234
>PRK06484 short chain dehydrogenase; Validated
Probab=96.03 E-value=0.1 Score=51.60 Aligned_cols=105 Identities=25% Similarity=0.310 Sum_probs=69.1
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCce---EeCCCCCCchHHHHHHHHhC--CCc
Q 017460 185 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVTE---FLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 185 ~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
..+.++||+|+ +++|.+.++.+...|+ +|+.+.+++++.+.+. +++... ..|..+ .+.....+.+... +.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35788999986 8999999998888999 9999999888776664 355422 235441 2334444444332 379
Q ss_pred cEEEEcCCCh--------------------------HHHHHHHHHhccCCceEEEecCCCC
Q 017460 258 DYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 258 dvVid~~g~~--------------------------~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
|++|.+.|.. ...+.++..+..+ |+++.+++...
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~~ 404 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIAS 404 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchhh
Confidence 9999988741 0123334455565 89999876543
No 235
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.03 E-value=0.021 Score=49.44 Aligned_cols=98 Identities=19% Similarity=0.310 Sum_probs=64.0
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHH
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~--vi~~~~~~~~~~~~v~~~ 252 (371)
+...++++++||-+|+|. |..++.+++..+. .+|++++.+++-.+.++ ++|.+. ++..+ ..+ .+
T Consensus 71 ~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d-----~~~---~~ 141 (215)
T TIGR00080 71 ELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGD-----GTQ---GW 141 (215)
T ss_pred HHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECC-----ccc---CC
Confidence 556788999999998764 6666677776653 26999999998776653 455432 22111 100 01
Q ss_pred hC-CCccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 253 TD-GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 253 ~~-gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.. +.||+|+-........+..++.|+++ |+++..
T Consensus 142 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 142 EPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred cccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 11 37999875544444566788899997 998764
No 236
>PRK08618 ornithine cyclodeaminase; Validated
Probab=96.03 E-value=0.13 Score=47.71 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=64.6
Q ss_pred CCCCEEEEEccChHHHHHHHHH-HHcCCCEEEEEcCChhhHHHHH-H----cCCceEeCCCCCCchHHHHHHHHhCCCcc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGA-KARGASRIIGVDTNPEKCEKAK-A----FGVTEFLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la-~~~G~~~vi~~~~~~~~~~~~~-~----lg~~~vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
+...+++|+|+|..|.+.+..+ ...++++|.+..+++++.+.+. + ++..... .. ++.+.+ ...|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~~~-~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEIYV-VN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcEEE-eC----CHHHHH-----hcCC
Confidence 4567899999999998776544 4668889999999998876553 2 3443111 21 233333 2689
Q ss_pred EEEEcCCChHHHHHHHHHhccCCceEEEecCCCC
Q 017460 259 YSFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 259 vVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+|+.|+++...+- . ..++++ -.+..+|....
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~p 225 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFMP 225 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC-cEEEecCCCCc
Confidence 9999998764332 3 788886 77778887643
No 237
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.042 Score=48.72 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=50.7
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc-e--EeCCCCCCchHHHHHHHHhCCCcc
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT-E--FLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~-~--vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
+.++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++ .+.. . ..|.. + .+.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~---~~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT--D---AIDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCC--C---HHHHHHHhcCCCC
Confidence 457999986 9999999999999999 99999998876655432 3322 1 22443 1 1234444444899
Q ss_pred EEEEcCC
Q 017460 259 YSFECIG 265 (371)
Q Consensus 259 vVid~~g 265 (371)
++|.+.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999887
No 238
>PRK09186 flagellin modification protein A; Provisional
Probab=96.01 E-value=0.15 Score=45.17 Aligned_cols=78 Identities=22% Similarity=0.408 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc----CCc---e-EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----GVT---E-FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l----g~~---~-vi~~~~~~~~~~~~v~~~~~- 254 (371)
++.++||+|+ |.+|...+..+...|+ +|+.+.+++++.+.+ +++ +.. . ..|..+ ...+.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4788999986 8999999999988999 899998888776543 222 221 1 235542 2334344443322
Q ss_pred -CCccEEEEcCC
Q 017460 255 -GGADYSFECIG 265 (371)
Q Consensus 255 -gg~dvVid~~g 265 (371)
+++|++|.+.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 36899999875
No 239
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.059 Score=47.46 Aligned_cols=79 Identities=25% Similarity=0.373 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||.|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++... . .|..+ ..+....+..... +++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999986 9999999999999999 999999987766544 4455432 2 24331 2222222222222 3789
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 240
>PRK06180 short chain dehydrogenase; Provisional
Probab=95.96 E-value=0.056 Score=48.71 Aligned_cols=79 Identities=23% Similarity=0.283 Sum_probs=53.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
.+.++||+|+ |.+|.+.++.+...|+ +|+++++++++.+.+.+.... . ..|..+ .......+..... +++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 3578999986 9999999998888899 999999998887666543211 1 234441 2233333333322 3689
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 241
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.95 E-value=0.25 Score=44.62 Aligned_cols=57 Identities=28% Similarity=0.359 Sum_probs=44.1
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEc---CChhhHHHHHHcCCceEeC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVD---TNPEKCEKAKAFGVTEFLN 237 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~---~~~~~~~~~~~lg~~~vi~ 237 (371)
....+++|.+|+=--+|..|.+.+.+|+.+|+ +++.+. .+.+|++.++.+|++.+.-
T Consensus 55 ~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t 114 (300)
T COG0031 55 KRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILT 114 (300)
T ss_pred HcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence 45669999955444479999999999999999 555553 4678899999999976553
No 242
>PRK06128 oxidoreductase; Provisional
Probab=95.93 E-value=0.14 Score=46.67 Aligned_cols=79 Identities=23% Similarity=0.259 Sum_probs=48.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh--h----HHHHHHcCCce-E--eCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--K----CEKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~--~----~~~~~~lg~~~-v--i~~~~~~~~~~~~v~~~~~- 254 (371)
.+.++||+|+ |++|.+.+..+...|+ +|+.+.++.+ + .+.+++.|... + .|..+ .....+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4689999986 9999999888888899 8877655432 1 12234445432 2 24431 2233333333322
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+++|++|.+.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 379999998873
No 243
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.93 E-value=0.058 Score=51.27 Aligned_cols=90 Identities=24% Similarity=0.345 Sum_probs=55.9
Q ss_pred EEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH--cCC--c-eEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 190 VVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA--FGV--T-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 190 VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~--lg~--~-~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
|+|+|+|.+|..+++.+...+- .+|++.+++.++.+.+.+ .+. . ..+|.. +. +.+.++.. +.|+||+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~----~~-~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVN----DP-ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TT----TH-HHHHHHHT-TSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecC----CH-HHHHHHHh-cCCEEEEC
Confidence 6899999999999999987764 389999999999877643 222 1 233443 22 22455443 56999999
Q ss_pred CCChHHHHHHHHHhccCCceEEE
Q 017460 264 IGDTGMITTALQSCCDGWGLAVT 286 (371)
Q Consensus 264 ~g~~~~l~~~~~~l~~~~G~~v~ 286 (371)
+|.......+-.|+..+ -.++.
T Consensus 75 ~gp~~~~~v~~~~i~~g-~~yvD 96 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAG-VHYVD 96 (386)
T ss_dssp SSGGGHHHHHHHHHHHT--EEEE
T ss_pred CccchhHHHHHHHHHhC-CCeec
Confidence 98653444444556665 56666
No 244
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.93 E-value=0.061 Score=47.43 Aligned_cols=78 Identities=29% Similarity=0.385 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+ +..+... ..|..+ .....+.+..... +
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTD-EEDVEATFAQIAEDFG 81 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999986 9999999999988999 899999988765443 3334431 234331 2233333333322 3
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
++|.||.+.|
T Consensus 82 ~id~vi~~ag 91 (253)
T PRK08217 82 QLNGLINNAG 91 (253)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 245
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.92 E-value=0.12 Score=42.57 Aligned_cols=88 Identities=20% Similarity=0.352 Sum_probs=58.7
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChH
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 268 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~ 268 (371)
+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+. ..++ ..+.+. ..|+||-++.+..
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~-~~~s------~~e~~~-----~~dvvi~~v~~~~ 69 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAE-VADS------PAEAAE-----QADVVILCVPDDD 69 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEE-EESS------HHHHHH-----HBSEEEE-SSSHH
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhh-hhhh------hhhHhh-----cccceEeecccch
Confidence 68899999999999888888999 999999999999999888854 3322 222222 3689999998765
Q ss_pred HHHHHHH------HhccCCceEEEecCC
Q 017460 269 MITTALQ------SCCDGWGLAVTLGVP 290 (371)
Q Consensus 269 ~l~~~~~------~l~~~~G~~v~~g~~ 290 (371)
..+..+. .+.++ ..++.++..
T Consensus 70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 70 AVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred hhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 5555444 34454 455566543
No 246
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=95.91 E-value=0.041 Score=47.99 Aligned_cols=103 Identities=19% Similarity=0.239 Sum_probs=72.7
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~ 254 (371)
...++.+|++|+=.|.|+ |.+++-||++.|. .+|+..+..++..+.++ ++|....+... . ..+.+...
T Consensus 88 ~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~----~Dv~~~~~ 160 (256)
T COG2519 88 ARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--L----GDVREGID 160 (256)
T ss_pred HHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--e----cccccccc
Confidence 568899999999988764 7888889988875 69999999999888774 34543211111 1 11222222
Q ss_pred C-CccEE-EEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 255 G-GADYS-FECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 255 g-g~dvV-id~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
+ .+|.| +|.-.-.+.++.+.+.|+++ |.++.+...
T Consensus 161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ 197 (256)
T COG2519 161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT 197 (256)
T ss_pred ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence 3 68875 66666667899999999998 999988543
No 247
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.88 E-value=0.21 Score=42.43 Aligned_cols=76 Identities=30% Similarity=0.389 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c----CCce-EeCCCCCCchHHHHHHHHhCCCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F----GVTE-FLNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-l----g~~~-vi~~~~~~~~~~~~v~~~~~gg~d 258 (371)
++.+++|+|+ |.+|.+.+..+...|+ +|+.+.++.++.+.+.+ + +... ..+..+ ..+..+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5789999986 9999998888888898 99999999887665532 2 3321 122210 11222222 2689
Q ss_pred EEEEcCCChH
Q 017460 259 YSFECIGDTG 268 (371)
Q Consensus 259 vVid~~g~~~ 268 (371)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887653
No 248
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=95.84 E-value=0.079 Score=46.68 Aligned_cols=79 Identities=20% Similarity=0.348 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCc-e--EeCCCCCCchHHHHHHHHhC--CCc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVT-E--FLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~--~~~~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
++.++||+|+ |++|.+.+..+...|+ +|+.+.++... .+.+++++.. . ..|..+ ...+...+.+... +++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4789999986 8999999988888999 89999886522 2333445532 1 234442 3334444444332 379
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|++|.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998864
No 249
>PRK05866 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.073 Score=48.51 Aligned_cols=79 Identities=19% Similarity=0.327 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-eE--eCCCCCCchHHHHHHHHh--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EF--LNPNDNNEPVQQVIKRIT--DG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--i~~~~~~~~~~~~v~~~~--~g 255 (371)
.+.++||+|+ |++|.+.++.+...|+ +|++++++.++.+.+. +.+.. .+ .|..+ .+.+.+.+.... -+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~g 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSD-LDAVDALVADVEKRIG 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3578999986 9999999998888899 9999999987765542 23332 12 24431 223333333322 13
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 78999999874
No 250
>PRK07402 precorrin-6B methylase; Provisional
Probab=95.83 E-value=0.19 Score=42.80 Aligned_cols=101 Identities=17% Similarity=0.246 Sum_probs=60.9
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vi~~~~~~~~~~~~v~~~~ 253 (371)
....++++++||=+|+|. |..++.+++.....+|++++.+++..+.++ +++... ++.. +..+.+..+.
T Consensus 34 ~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~-----d~~~~~~~~~ 107 (196)
T PRK07402 34 SQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG-----SAPECLAQLA 107 (196)
T ss_pred HhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC-----chHHHHhhCC
Confidence 455677889998888653 445556665543239999999998877764 355432 2322 1222222221
Q ss_pred CCCccE-EEEcCCC-hHHHHHHHHHhccCCceEEEec
Q 017460 254 DGGADY-SFECIGD-TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 254 ~gg~dv-Vid~~g~-~~~l~~~~~~l~~~~G~~v~~g 288 (371)
..+|. +++.... ...++.+.+.|+++ |+++...
T Consensus 108 -~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~ 142 (196)
T PRK07402 108 -PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATA 142 (196)
T ss_pred -CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 22344 4543322 24678888999997 9988774
No 251
>PRK05867 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.059 Score=47.78 Aligned_cols=79 Identities=22% Similarity=0.282 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc---eEeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~---~vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|.+.+..+...|+ +|+.+.++.++.+.+. +.+.. ...|..+ ...+.+.+.+... +
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999986 8999999999989999 9999999887765542 22322 1234431 2334444443322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999998773
No 252
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.12 Score=46.46 Aligned_cols=78 Identities=18% Similarity=0.250 Sum_probs=52.0
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc-eE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-EF--LNPNDNNEPVQQVIKRITD--GGADY 259 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~v--i~~~~~~~~~~~~v~~~~~--gg~dv 259 (371)
+.+|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ ++.. .. .|..+ ...+.+.+..... +++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTD-RAAVFAAVETAVEHFGRLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 468999986 9999999888888898 89999998887766543 3221 12 24331 2333333333322 37899
Q ss_pred EEEcCCC
Q 017460 260 SFECIGD 266 (371)
Q Consensus 260 Vid~~g~ 266 (371)
+|.+.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 253
>PRK08339 short chain dehydrogenase; Provisional
Probab=95.82 E-value=0.076 Score=47.50 Aligned_cols=79 Identities=23% Similarity=0.350 Sum_probs=52.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc----CCc-e--EeCCCCCCchHHHHHHHHhC-C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF----GVT-E--FLNPNDNNEPVQQVIKRITD-G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l----g~~-~--vi~~~~~~~~~~~~v~~~~~-g 255 (371)
+++++||+|+ +++|.+.++.+...|+ +|++++++.++.+.+. ++ +.. . ..|..+ ..+....+.+... +
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4788999986 8999999999989999 8999999887765542 22 322 1 234442 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999998874
No 254
>PRK07904 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.09 Score=46.72 Aligned_cols=82 Identities=20% Similarity=0.329 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEcc-ChHHHHHHHHHHHc-CCCEEEEEcCChhh-HHH----HHHcCC-c-eE--eCCCCCCchHHHHHHH
Q 017460 183 DISKGSTVVIFGL-GTVGLSVAQGAKAR-GASRIIGVDTNPEK-CEK----AKAFGV-T-EF--LNPNDNNEPVQQVIKR 251 (371)
Q Consensus 183 ~~~~~~~VlI~Ga-g~~G~~ai~la~~~-G~~~vi~~~~~~~~-~~~----~~~lg~-~-~v--i~~~~~~~~~~~~v~~ 251 (371)
.+..+.+|||+|+ |++|.+.++-+... |+ +|+++++++++ .+. +++.+. . ++ .|..+ ..++.+.+.+
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~ 81 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDA 81 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHH
Confidence 3566789999986 99999988876666 57 99999888765 333 333342 1 22 34431 2333333444
Q ss_pred HhC-CCccEEEEcCCC
Q 017460 252 ITD-GGADYSFECIGD 266 (371)
Q Consensus 252 ~~~-gg~dvVid~~g~ 266 (371)
... +++|+++.+.|.
T Consensus 82 ~~~~g~id~li~~ag~ 97 (253)
T PRK07904 82 AFAGGDVDVAIVAFGL 97 (253)
T ss_pred HHhcCCCCEEEEeeec
Confidence 433 489999887754
No 255
>PRK06196 oxidoreductase; Provisional
Probab=95.78 E-value=0.069 Score=49.16 Aligned_cols=78 Identities=24% Similarity=0.365 Sum_probs=52.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC-Cce-EeCCCCCCchHHHHHHHHhC--CCccE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG-VTE-FLNPNDNNEPVQQVIKRITD--GGADY 259 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg-~~~-vi~~~~~~~~~~~~v~~~~~--gg~dv 259 (371)
.+.+|||+|+ |++|.+.+..+...|+ +|+++.+++++.+.+ .++. +.. ..|..+ .......+.+... +++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4678999986 8999999988888999 899999988776544 3332 221 234441 2233333433332 37999
Q ss_pred EEEcCC
Q 017460 260 SFECIG 265 (371)
Q Consensus 260 Vid~~g 265 (371)
+|.+.|
T Consensus 103 li~nAg 108 (315)
T PRK06196 103 LINNAG 108 (315)
T ss_pred EEECCC
Confidence 999887
No 256
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=95.76 E-value=0.073 Score=44.06 Aligned_cols=94 Identities=15% Similarity=0.261 Sum_probs=61.4
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
+|.|+|| |-+|...++-|+.+|. .|++++|++.|....+..-+. -+++.. ...+.+ .|+|+||++.+
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~----~~a~~l-----~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLT----SLASDL-----AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChh----hhHhhh-----cCCceEEEecc
Confidence 5788886 9999999999999998 999999999987554222110 122221 111111 28999999988
Q ss_pred Ch--H-------HHHHHHHHhccC-CceEEEecCCCC
Q 017460 266 DT--G-------MITTALQSCCDG-WGLAVTLGVPKL 292 (371)
Q Consensus 266 ~~--~-------~l~~~~~~l~~~-~G~~v~~g~~~~ 292 (371)
.. . ..+..+..++.. --|+..+|..++
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 64 1 234456666652 247888876543
No 257
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=95.74 E-value=0.063 Score=47.61 Aligned_cols=79 Identities=24% Similarity=0.396 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.|... . .|..+ ...+.+.+..... +
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4789999986 9999999998888899 899999987765443 3334321 2 24441 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 258
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.72 E-value=0.1 Score=47.46 Aligned_cols=37 Identities=19% Similarity=0.320 Sum_probs=32.1
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
.++.++||+|+|++|.+++..+...|+++|+++.|+.
T Consensus 124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 3578899999999999988888889996799999986
No 259
>PRK07774 short chain dehydrogenase; Provisional
Probab=95.72 E-value=0.077 Score=46.79 Aligned_cols=79 Identities=24% Similarity=0.371 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-H---HcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-K---AFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~---~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ . +.+.. . ..|..+ .....+.+.+... +
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD-PDSAKAMADATVSAFG 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999986 9999999998888899 999999987665433 2 22221 1 234431 2223333333321 2
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (250)
T PRK07774 83 GIDYLVNNAAI 93 (250)
T ss_pred CCCEEEECCCC
Confidence 69999998873
No 260
>PRK07454 short chain dehydrogenase; Provisional
Probab=95.71 E-value=0.1 Score=45.79 Aligned_cols=79 Identities=18% Similarity=0.212 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||.|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+.. . ..|..+ .+.+...+..... +
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN-PEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4578999985 9999999999988999 9999999887665442 22321 1 234431 2333333433322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999998874
No 261
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.71 E-value=0.052 Score=55.39 Aligned_cols=76 Identities=25% Similarity=0.337 Sum_probs=53.0
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh---------------------hHHHHHHcCCceEeCCCCC-C
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE---------------------KCEKAKAFGVTEFLNPNDN-N 242 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~---------------------~~~~~~~lg~~~vi~~~~~-~ 242 (371)
..+.+|+|+|+|+.|++++..+...|+ +|+++++.+. ..+.++++|++...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 8999987542 3455677887644433210 1
Q ss_pred chHHHHHHHHhCCCccEEEEcCCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
..+. .+. .++|.||.++|.
T Consensus 404 i~~~----~~~-~~~DavilAtGa 422 (654)
T PRK12769 404 ISLE----SLL-EDYDAVFVGVGT 422 (654)
T ss_pred CCHH----HHH-hcCCEEEEeCCC
Confidence 1111 111 269999998886
No 262
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.69 E-value=0.28 Score=37.63 Aligned_cols=92 Identities=23% Similarity=0.295 Sum_probs=60.7
Q ss_pred EEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChHH
Q 017460 190 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGM 269 (371)
Q Consensus 190 VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~~ 269 (371)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|...+. .+ ..-.+.+++..-..++.++-++++...
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~i~-gd---~~~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEVIY-GD---ATDPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEEEE-S----TTSHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccccc-cc---chhhhHHhhcCccccCEEEEccCCHHH
Confidence 6788999999999999999776 999999999999999998865443 21 122233343322278988888876532
Q ss_pred ---HHHHHHHhccCCceEEEe
Q 017460 270 ---ITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 270 ---l~~~~~~l~~~~G~~v~~ 287 (371)
+-..++.+.+. .+++..
T Consensus 76 n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 76 NLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHCCC-CeEEEE
Confidence 22233334444 555543
No 263
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.68 E-value=0.075 Score=47.79 Aligned_cols=78 Identities=19% Similarity=0.354 Sum_probs=50.7
Q ss_pred CCCEEEEEccC---hHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceE--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Gag---~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
+++++||+|++ ++|.+.++.+...|+ +|+.+.++++..+.+ +++|.... .|..+ .......+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 47889999874 899999998888999 888887765332222 34454322 35442 2333344444332
Q ss_pred CCccEEEEcCC
Q 017460 255 GGADYSFECIG 265 (371)
Q Consensus 255 gg~dvVid~~g 265 (371)
+.+|+++++.|
T Consensus 84 g~iD~lVnnAG 94 (271)
T PRK06505 84 GKLDFVVHAIG 94 (271)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 264
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.67 E-value=0.094 Score=45.91 Aligned_cols=79 Identities=25% Similarity=0.396 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ ++.+... . .|..+ ...+.+.+..... +
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3578999986 9999999999888899 899999988775443 3344322 2 34431 2334443433322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|.||.+.|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999998864
No 265
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=95.67 E-value=0.16 Score=43.74 Aligned_cols=104 Identities=24% Similarity=0.296 Sum_probs=70.6
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCceEeCCCCCC-chHHHHHHHHhC
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNN-EPVQQVIKRITD 254 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~-~~~~~~v~~~~~ 254 (371)
.++.....+||=+|.+ .|..++.+|..+. -.++++++.++++.+.++ +.|.+..+..- . .+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~--~~gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELL--LGGDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEE--ecCcHHHHHHhccC
Confidence 4556678889988853 4777788888775 338999999999988874 46765422111 1 245555655444
Q ss_pred CCccEEE-EcCC--ChHHHHHHHHHhccCCceEEEec
Q 017460 255 GGADYSF-ECIG--DTGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 255 gg~dvVi-d~~g--~~~~l~~~~~~l~~~~G~~v~~g 288 (371)
+.||+|| |+-- -+..++.++++|++| |.++.=.
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DN 166 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADN 166 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEee
Confidence 5899985 4442 234689999999997 8776543
No 266
>PRK07576 short chain dehydrogenase; Provisional
Probab=95.67 E-value=0.055 Score=48.41 Aligned_cols=78 Identities=24% Similarity=0.314 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ .+.+.. . .+|..+ ...+...+..... +
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999986 8999999998888999 899999887765433 222322 1 235441 2334444444322 3
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7899998775
No 267
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.66 E-value=0.15 Score=45.07 Aligned_cols=79 Identities=25% Similarity=0.391 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc---eEeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT---EFLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~---~vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+.. ...|..+ ...+...+..... +
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTD-EEAINAGIDYAVETFG 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999985 9999999998888899 999999988766543 223332 1224431 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+||.+.+.
T Consensus 81 ~~d~vi~~a~~ 91 (258)
T PRK12429 81 GVDILVNNAGI 91 (258)
T ss_pred CCCEEEECCCC
Confidence 79999998863
No 268
>PRK07478 short chain dehydrogenase; Provisional
Probab=95.64 E-value=0.097 Score=46.37 Aligned_cols=79 Identities=19% Similarity=0.304 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ |++|...+..+...|+ +|+.+++++++.+.+ ++.+... . .|..+ .......+.+... +
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 3678999986 8999999998888999 899999988776554 2334321 2 24431 2223333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|++|.+.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 269
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.64 E-value=0.05 Score=46.46 Aligned_cols=98 Identities=16% Similarity=0.254 Sum_probs=60.4
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhCCC
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGG 256 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~v~~~~~gg 256 (371)
..+..++.+||-+|+|. |..++.+++. |. +|++++.+++-.+.+++ .+...+ ... ..++.+ . ...+.
T Consensus 25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~--~~d~~~-~--~~~~~ 95 (197)
T PRK11207 25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTA--VVDLNN-L--TFDGE 95 (197)
T ss_pred hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEE--ecChhh-C--CcCCC
Confidence 33455678999999875 6677777764 77 99999999987666643 232211 000 111111 0 11237
Q ss_pred ccEEEEcCCC--------hHHHHHHHHHhccCCceEEEec
Q 017460 257 ADYSFECIGD--------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 257 ~dvVid~~g~--------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
||+|+....- ...+....+.|+++ |.++.+.
T Consensus 96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred cCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 9999875431 13466777889998 9965543
No 270
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=95.63 E-value=0.24 Score=38.88 Aligned_cols=92 Identities=17% Similarity=0.302 Sum_probs=56.5
Q ss_pred EEEEcc-ChHHHHHHHHHHHcC--CCEEEEEcCCh--hhH-HHHHHcCCceEeCCCCCCchHHHHHH-------------
Q 017460 190 VVIFGL-GTVGLSVAQGAKARG--ASRIIGVDTNP--EKC-EKAKAFGVTEFLNPNDNNEPVQQVIK------------- 250 (371)
Q Consensus 190 VlI~Ga-g~~G~~ai~la~~~G--~~~vi~~~~~~--~~~-~~~~~lg~~~vi~~~~~~~~~~~~v~------------- 250 (371)
|.|+|+ |++|..++++.+... + +|++..... +++ +.+++|.+..++-.+ +...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~---~~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIAD---EEAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESS---HHHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHHhhhcCCCCEEE
Confidence 578897 999999999999886 6 677765433 333 334778887665442 22222222
Q ss_pred -------HHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 251 -------RITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 251 -------~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
++... .+|+|+.++.+-..+.-.+.++.. |+-+.+
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~--gk~iaL 119 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKA--GKDIAL 119 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHT--TSEEEE
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHC--CCeEEE
Confidence 33332 788888887666677888888876 444444
No 271
>PRK07063 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.074 Score=47.31 Aligned_cols=79 Identities=20% Similarity=0.284 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCc-e--EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-E--FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l-----g~~-~--vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.++||.|+ |++|.+.+..+...|+ +|+.+++++++.+.+ +++ +.. . ..|..+ ..++...+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4678999986 8999999999889999 899999988766544 222 221 1 224431 2334444443322
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+.+|++|.+.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 379999998873
No 272
>PRK09072 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.1 Score=46.51 Aligned_cols=79 Identities=27% Similarity=0.371 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-c--CC-ceE--eCCCCCCchHHHHHHHHh-CCCc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-F--GV-TEF--LNPNDNNEPVQQVIKRIT-DGGA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-l--g~-~~v--i~~~~~~~~~~~~v~~~~-~gg~ 257 (371)
++.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ + +. ... .|..+ .....+.+.... .+++
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTS-EAGREAVLARAREMGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHhcCCC
Confidence 4678999985 9999999988888999 89999998877655532 2 21 112 24431 222222222222 2478
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+++.+.|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999998874
No 273
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.60 E-value=0.27 Score=43.94 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
.+.+|+|+|.|++|..++..+-..|..+++.++.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 46789999999999999999999998899988765
No 274
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.60 E-value=0.21 Score=44.49 Aligned_cols=78 Identities=17% Similarity=0.338 Sum_probs=49.0
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCCh---hhHHHH-HHc-CCc---eEeCCCCCCchHHHHHHHHhC
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP---EKCEKA-KAF-GVT---EFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~---~~~~~~-~~l-g~~---~vi~~~~~~~~~~~~v~~~~~ 254 (371)
.++++||+|+ +++|.+.+..+...|+ +|+.+.++. ++.+.+ .++ +.. ...|..+ .+.....+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4688999985 5899998888888999 888886543 333333 333 221 1235542 3344444444433
Q ss_pred --CCccEEEEcCC
Q 017460 255 --GGADYSFECIG 265 (371)
Q Consensus 255 --gg~dvVid~~g 265 (371)
+++|+++.+.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999998876
No 275
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.58 E-value=0.12 Score=44.28 Aligned_cols=81 Identities=30% Similarity=0.409 Sum_probs=56.4
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
-.|.+++|+|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +|+. .++.. ++....+|+++-|
T Consensus 26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~-----------~l~~~~~Dv~vp~ 92 (200)
T cd01075 26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPE-----------EIYSVDADVFAPC 92 (200)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcch-----------hhccccCCEEEec
Confidence 357899999999999999999999999 99999999888776644 4653 33321 1111258898866
Q ss_pred CCChHHHHHHHHHhc
Q 017460 264 IGDTGMITTALQSCC 278 (371)
Q Consensus 264 ~g~~~~l~~~~~~l~ 278 (371)
......-...++.++
T Consensus 93 A~~~~I~~~~~~~l~ 107 (200)
T cd01075 93 ALGGVINDDTIPQLK 107 (200)
T ss_pred ccccccCHHHHHHcC
Confidence 544333344455564
No 276
>PRK05717 oxidoreductase; Validated
Probab=95.56 E-value=0.1 Score=46.21 Aligned_cols=79 Identities=22% Similarity=0.265 Sum_probs=52.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT-E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
.|.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++++.. . ..|..+ .......+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999985 9999999988888899 899998877655443 444432 1 234441 2233333343332 3689
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998873
No 277
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.54 E-value=0.52 Score=34.70 Aligned_cols=85 Identities=25% Similarity=0.425 Sum_probs=55.3
Q ss_pred EEEEEccChHHHHHHHHHHHcC---CCEEEEE-cCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 189 TVVIFGLGTVGLSVAQGAKARG---ASRIIGV-DTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G---~~~vi~~-~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
+|.|+|+|.+|.+.+.-+...| . +|+.+ .+++++.+.+ +++++.... .+..+.++ ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhcccccc------CChHHhhc-----cCCEEEEE
Confidence 4778899999999999888888 6 88844 8999988777 566654222 12333333 37999999
Q ss_pred CCChHHHHHHHHH---hccCCceEEEe
Q 017460 264 IGDTGMITTALQS---CCDGWGLAVTL 287 (371)
Q Consensus 264 ~g~~~~l~~~~~~---l~~~~G~~v~~ 287 (371)
+... .+...++. ..++ ..++.+
T Consensus 69 v~p~-~~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 69 VKPQ-QLPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp S-GG-GHHHHHHHHHHHHTT-SEEEEE
T ss_pred ECHH-HHHHHHHHHhhccCC-CEEEEe
Confidence 9764 44444444 3443 455554
No 278
>PRK07677 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.091 Score=46.52 Aligned_cols=78 Identities=24% Similarity=0.324 Sum_probs=51.6
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-eEe--CCCCCCchHHHHHHHHhC--CC
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EFL--NPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~vi--~~~~~~~~~~~~v~~~~~--gg 256 (371)
|.++||.|+ |++|.+.++.+...|+ +|+++++++++.+.+. +.+.. ..+ |..+ ...+...+.+... +.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRN-PEDVQKMVEQIDEKFGR 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 468999986 8999999999999999 9999999887665442 22321 222 4431 2333333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 79 id~lI~~ag~ 88 (252)
T PRK07677 79 IDALINNAAG 88 (252)
T ss_pred ccEEEECCCC
Confidence 8999998873
No 279
>PRK06198 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.086 Score=46.84 Aligned_cols=80 Identities=24% Similarity=0.352 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHH----HHHHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE----KAKAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~----~~~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.+++|.|+ |++|...++.+...|++.|+++++++++.. .+++.+... .+|..+ ...+.+.+..... +
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5688999986 899999999999999943999988876554 233344432 235441 2223333333221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999874
No 280
>PRK07062 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.081 Score=47.20 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----H-c-CCc---eEeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-F-GVT---EFLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~-l-g~~---~vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.++||.|+ +++|.+.++.+...|+ +|+.+.+++++.+.+. + . +.. ...|..+ .+...+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4788999986 8999999999989999 8999999887765432 1 1 111 1224441 2333333333322
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+.+|++|.+.|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 379999999874
No 281
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.53 E-value=0.1 Score=46.29 Aligned_cols=79 Identities=20% Similarity=0.310 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...+..+...|+ +|+++.+++++.+.+ ++.+... . .|..+ ...+.+.+..... +
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTN-EDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4689999986 9999999999989999 899998988665433 3445432 1 24431 2223333332211 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 68999998874
No 282
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.51 E-value=0.14 Score=44.60 Aligned_cols=74 Identities=18% Similarity=0.247 Sum_probs=49.7
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceE-eCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEF-LNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~v-i~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
+++|+|+ |++|.+.++.+...|+ +|+.+.+++++.+.+ ++++...+ .|..+ ...+.+.+... .+.+|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~-~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLF-PHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHH-hhcCcEEEECCC
Confidence 5899986 8999999998888899 999999988877654 44554322 35441 22333333332 236899998764
No 283
>PRK00811 spermidine synthase; Provisional
Probab=95.51 E-value=0.11 Score=47.10 Aligned_cols=95 Identities=16% Similarity=0.175 Sum_probs=62.3
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC--------c---eEeCCCCCCchHHHHHHHHh
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV--------T---EFLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~--------~---~vi~~~~~~~~~~~~v~~~~ 253 (371)
.+.++||++|+|. |.++..++++.+..+|.+++.+++-.+.++++-. + .++ ..+..+.+.. .
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~-----~~Da~~~l~~-~ 147 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV-----IGDGIKFVAE-T 147 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE-----ECchHHHHhh-C
Confidence 4568999998865 6667777777677799999999998888866311 1 111 1122233333 3
Q ss_pred CCCccEEEEcCCC----------hHHHHHHHHHhccCCceEEEe
Q 017460 254 DGGADYSFECIGD----------TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~gg~dvVid~~g~----------~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.+|+||--... .+.++.+.+.|+++ |.++..
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~ 190 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQ 190 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence 3489998753321 22356778899998 998875
No 284
>PRK07024 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.11 Score=46.08 Aligned_cols=78 Identities=18% Similarity=0.174 Sum_probs=51.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cC----Cc-eEeCCCCCCchHHHHHHHHhC--CCc
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FG----VT-EFLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg----~~-~vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +. +. ...|..+ ...+.+.+.+... +.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 358999985 9999999888888899 99999998887665432 22 11 1235441 2334444443332 268
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998763
No 285
>PRK06179 short chain dehydrogenase; Provisional
Probab=95.47 E-value=0.065 Score=47.98 Aligned_cols=77 Identities=22% Similarity=0.375 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
.+.+++|+|+ |.+|...++.+...|+ +|++++++.++.+... +... ..|..+ .+.+.+.+..... +.+|++|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD-DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC-HHHHHHHHHHHHHhCCCCCEEE
Confidence 3568999986 9999999888888899 8999998876654321 2222 235442 3444444444432 3789999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99984
No 286
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.47 E-value=0.16 Score=45.64 Aligned_cols=93 Identities=15% Similarity=0.173 Sum_probs=58.8
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc---CCceEeCCCCCCchHHHHHHHHhCCCccE
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vi~~~~~~~~~~~~v~~~~~gg~dv 259 (371)
..++.+++|+|+|++|.+++..+...|+ +|+++.+++++.+.+ +.+ +....... .+ .....+|+
T Consensus 114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~-------~~----~~~~~~Di 181 (270)
T TIGR00507 114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSM-------DE----LPLHRVDL 181 (270)
T ss_pred CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEech-------hh----hcccCccE
Confidence 3457889999999999999888888898 999999998876554 333 22122211 11 11126899
Q ss_pred EEEcCCChH--HH---HHHHHHhccCCceEEEecC
Q 017460 260 SFECIGDTG--MI---TTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 260 Vid~~g~~~--~l---~~~~~~l~~~~G~~v~~g~ 289 (371)
||+|++... .. ......++++ ..++.+..
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 999998531 01 1123446664 56666643
No 287
>PRK06483 dihydromonapterin reductase; Provisional
Probab=95.46 E-value=0.14 Score=44.83 Aligned_cols=78 Identities=17% Similarity=0.190 Sum_probs=51.7
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
+.++||.|+ +++|.+.++.+...|+ +|+.+++++++ .+.+++.++.. ..|..+ .......+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 457999986 8999999998888999 99999887654 33445556432 234431 2333344444332 2699999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 288
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.44 E-value=0.099 Score=46.39 Aligned_cols=78 Identities=19% Similarity=0.284 Sum_probs=50.5
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--e--EeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--E--FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~--vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
.++++||.|+ +++|.+.++.+...|+ +|+.+.++++..+.++++... . .+|..+ .++..+.+.+... +.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 5789999986 4899998888888999 899888875434444444221 1 234442 2334444443332 37
Q ss_pred ccEEEEcCC
Q 017460 257 ADYSFECIG 265 (371)
Q Consensus 257 ~dvVid~~g 265 (371)
+|+++.+.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 999999886
No 289
>PRK06194 hypothetical protein; Provisional
Probab=95.43 E-value=0.11 Score=46.92 Aligned_cols=79 Identities=22% Similarity=0.325 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HH---cCCce-Ee--CCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FGVTE-FL--NPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~---lg~~~-vi--~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|...+..+...|+ +|++++++.++.+.+ .+ .+... ++ |..+ ...+.+.+..... +
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSD-AAQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999985 9999999998888899 899998887665443 22 23321 22 4431 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 83 ~id~vi~~Ag~ 93 (287)
T PRK06194 83 AVHLLFNNAGV 93 (287)
T ss_pred CCCEEEECCCC
Confidence 68999998875
No 290
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.43 E-value=0.26 Score=44.34 Aligned_cols=76 Identities=22% Similarity=0.327 Sum_probs=49.0
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHh-CCCccE
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRIT-DGGADY 259 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~-~gg~dv 259 (371)
++++|.|+|++|.+.+..+. .|+ +|+.+++++++.+.+ ++.|.. . ..|..+ .+.....+.+.. .+++|+
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVTG 79 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCCE
Confidence 56788898999999888774 798 999999987765443 223432 1 235442 233434333331 137999
Q ss_pred EEEcCCC
Q 017460 260 SFECIGD 266 (371)
Q Consensus 260 Vid~~g~ 266 (371)
+|.+.|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999874
No 291
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.40 E-value=0.076 Score=46.58 Aligned_cols=80 Identities=25% Similarity=0.294 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC-c---eEeCCCCC-Cch---HHHHHHHH
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV-T---EFLNPNDN-NEP---VQQVIKRI 252 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~-~---~vi~~~~~-~~~---~~~~v~~~ 252 (371)
++.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +.+. . ..+|..+. ... +.+.+...
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4678999986 9999999988888999 8999999887765442 2221 1 11233210 112 23334333
Q ss_pred hCCCccEEEEcCCC
Q 017460 253 TDGGADYSFECIGD 266 (371)
Q Consensus 253 ~~gg~dvVid~~g~ 266 (371)
..+.+|++|.+.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 33478999998883
No 292
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.39 E-value=0.049 Score=48.02 Aligned_cols=106 Identities=21% Similarity=0.236 Sum_probs=64.6
Q ss_pred hhhhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HHcCCceE--eCCCC-CCchHHHHH
Q 017460 178 AWNVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKA----KAFGVTEF--LNPND-NNEPVQQVI 249 (371)
Q Consensus 178 l~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~----~~lg~~~v--i~~~~-~~~~~~~~v 249 (371)
+....+++||++|+=.|.|+ |-+...+++..|. .+|+..+.++++.+.+ +.+|.... +...+ ....+.+.
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~~- 109 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDEE- 109 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--STT-
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceeccccccc-
Confidence 34678899999999987653 5566677776652 4999999999988777 44565321 11110 01112111
Q ss_pred HHHhCCCccEE-EEcCCChHHHHHHHHHh-ccCCceEEEecC
Q 017460 250 KRITDGGADYS-FECIGDTGMITTALQSC-CDGWGLAVTLGV 289 (371)
Q Consensus 250 ~~~~~gg~dvV-id~~g~~~~l~~~~~~l-~~~~G~~v~~g~ 289 (371)
.+..+|.| +|.-.-...++.+.+.| +++ |+++.+..
T Consensus 110 ---~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 110 ---LESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp ----TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred ---ccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 11267775 66665556899999999 887 99998854
No 293
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.38 E-value=0.12 Score=45.99 Aligned_cols=78 Identities=28% Similarity=0.322 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---HcCCce---EeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVTE---FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~---~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |++|.+.++.+...|+ +|+++++++...+..+ ..+.+. ..|..+ .......+.+... ++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999986 9999999998888999 8999988754333333 334321 235441 2333344444322 37
Q ss_pred ccEEEEcCC
Q 017460 257 ADYSFECIG 265 (371)
Q Consensus 257 ~dvVid~~g 265 (371)
+|+++.+.|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999886
No 294
>PRK07890 short chain dehydrogenase; Provisional
Probab=95.38 E-value=0.13 Score=45.63 Aligned_cols=79 Identities=20% Similarity=0.274 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eEeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ |++|...+..+...|+ +|+.+++++++.+.+.+ .+.. ...|..+ ...+...+.+... +
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999986 8999999998889999 99999998876554422 2321 1234431 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 68999998863
No 295
>PRK08317 hypothetical protein; Provisional
Probab=95.38 E-value=0.065 Score=46.87 Aligned_cols=101 Identities=23% Similarity=0.343 Sum_probs=67.6
Q ss_pred hhhcCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHc----CCc-eEeCCCCCCchHHHHHHHH
Q 017460 179 WNVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAF----GVT-EFLNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 179 ~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~l----g~~-~vi~~~~~~~~~~~~v~~~ 252 (371)
.+...+.++++||.+|+|. |..+..+++..+ ..++++++.++...+.+++. +.. .++... ...+ .+
T Consensus 12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~~-----~~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADGL-----PF 83 (241)
T ss_pred HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--cccC-----CC
Confidence 3567788999999999876 888888888773 23899999999988888664 111 111111 0000 12
Q ss_pred hCCCccEEEEcC-----CC-hHHHHHHHHHhccCCceEEEec
Q 017460 253 TDGGADYSFECI-----GD-TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 253 ~~gg~dvVid~~-----g~-~~~l~~~~~~l~~~~G~~v~~g 288 (371)
.++.+|+|+... .. ...++.+.++|+++ |.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 234789887532 22 23578889999998 9988764
No 296
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=95.38 E-value=0.14 Score=46.04 Aligned_cols=78 Identities=22% Similarity=0.288 Sum_probs=57.9
Q ss_pred CCCEEEEEcc-ChHHHH-HHHHHHHcCCCEEEEEcCChhhHHHH-----HHcCCc---eEeCCCCCCchHHHHHHHHhCC
Q 017460 186 KGSTVVIFGL-GTVGLS-VAQGAKARGASRIIGVDTNPEKCEKA-----KAFGVT---EFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~-ai~la~~~G~~~vi~~~~~~~~~~~~-----~~lg~~---~vi~~~~~~~~~~~~v~~~~~g 255 (371)
-|.+.+|.|+ .++|.+ |-++|+ .|. +|+.+.|+.+|++.. ++.++. .++|....+. .-+.+++.+.+
T Consensus 48 ~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~~ 124 (312)
T KOG1014|consen 48 LGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLAG 124 (312)
T ss_pred cCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhcC
Confidence 4688999997 789977 566666 999 899999999998765 345542 3568774333 45566666666
Q ss_pred -CccEEEEcCCC
Q 017460 256 -GADYSFECIGD 266 (371)
Q Consensus 256 -g~dvVid~~g~ 266 (371)
.+.+.++++|-
T Consensus 125 ~~VgILVNNvG~ 136 (312)
T KOG1014|consen 125 LDVGILVNNVGM 136 (312)
T ss_pred CceEEEEecccc
Confidence 88899999984
No 297
>PRK04457 spermidine synthase; Provisional
Probab=95.37 E-value=0.31 Score=43.60 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=63.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc-CCc------eEeCCCCCCchHHHHHHHHhCCCc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF-GVT------EFLNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l-g~~------~vi~~~~~~~~~~~~v~~~~~gg~ 257 (371)
.++.+||++|.|+ |.++..+++.....++++++.+++-.+.+++. +.. .++. .+..+.+... .+.+
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~-----~Da~~~l~~~-~~~y 137 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE-----ADGAEYIAVH-RHST 137 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE-----CCHHHHHHhC-CCCC
Confidence 4567899999875 77788888777444999999999999988763 321 1221 2333344332 2379
Q ss_pred cEEE-EcCCC---------hHHHHHHHHHhccCCceEEE
Q 017460 258 DYSF-ECIGD---------TGMITTALQSCCDGWGLAVT 286 (371)
Q Consensus 258 dvVi-d~~g~---------~~~l~~~~~~l~~~~G~~v~ 286 (371)
|+|+ |.... .+.++.+.+.|+++ |.++.
T Consensus 138 D~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvi 175 (262)
T PRK04457 138 DVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVV 175 (262)
T ss_pred CEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEE
Confidence 9986 43221 35678889999998 99876
No 298
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.37 E-value=0.12 Score=46.55 Aligned_cols=78 Identities=26% Similarity=0.343 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |++|.+.+..+...|+ +|+++++++++.+.+ +..+... ..|..+ ..++.+.+.+... +
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH-REEVTHLADEAFRLLG 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 4778999985 8999999999888999 899998887765543 2234321 234431 2233333333222 3
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
.+|++|.+.|
T Consensus 83 ~id~li~nAg 92 (275)
T PRK05876 83 HVDVVFSNAG 92 (275)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 299
>PRK07574 formate dehydrogenase; Provisional
Probab=95.35 E-value=0.19 Score=47.43 Aligned_cols=89 Identities=20% Similarity=0.194 Sum_probs=57.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|.|.+|+..++.++..|+ +|++.+++....+..+.+|+... .++.+.++ ..|+|+-+..
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH-------VSFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec-------CCHHHHhh-----cCCEEEEcCC
Confidence 47899999999999999999999999 99999887644444445554211 11222221 4677766665
Q ss_pred ChHH----H-HHHHHHhccCCceEEEec
Q 017460 266 DTGM----I-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 ~~~~----l-~~~~~~l~~~~G~~v~~g 288 (371)
.+.. + ...+..++++ ..+|.++
T Consensus 258 lt~~T~~li~~~~l~~mk~g-a~lIN~a 284 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRG-SYLVNTA 284 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCC-cEEEECC
Confidence 3221 1 2455566665 5555554
No 300
>PRK06482 short chain dehydrogenase; Provisional
Probab=95.35 E-value=0.12 Score=46.42 Aligned_cols=77 Identities=26% Similarity=0.346 Sum_probs=51.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCc-e--EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVT-E--FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
.++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+++ ++.. . ..|..+ ...+.+.+.+... +++|+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999985 9999999988888899 99999999887766644 2321 1 234441 2233344433322 378999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 998873
No 301
>PLN02366 spermidine synthase
Probab=95.34 E-value=0.15 Score=46.72 Aligned_cols=103 Identities=16% Similarity=0.137 Sum_probs=63.8
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eEeCC-CC--CCchHHHHHHHHhCCCcc
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNP-ND--NNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~vi~~-~~--~~~~~~~~v~~~~~gg~d 258 (371)
..+.++|||+|.|. |.++..++++-+..+|.+++.+++-.+.++++-.. ..++. +- ...+....+++..++.+|
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 35578999998765 55677888887766899999999888887663211 00100 00 011222233333334799
Q ss_pred EEEEcCCC----------hHHHHHHHHHhccCCceEEEec
Q 017460 259 YSFECIGD----------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 259 vVid~~g~----------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
+||--... .+.++.+.++|+++ |.++.-+
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~ 206 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA 206 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence 98653222 13477888899998 9987643
No 302
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.34 E-value=0.19 Score=43.91 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=30.3
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
..+|+|.|+|++|...+..+...|..+++.++.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57899999999999999999999998888886543
No 303
>PRK06172 short chain dehydrogenase; Provisional
Probab=95.33 E-value=0.12 Score=45.71 Aligned_cols=79 Identities=20% Similarity=0.371 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ |++|...+..+...|+ +|+.+.+++++.+.+ ++.+.. .. .|..+ ...+.+.+..... +
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTR-DAEVKALVEQTIAAYG 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 4689999986 8999999888888899 899999988765433 333432 12 24431 2223333333221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 304
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.33 E-value=0.091 Score=44.74 Aligned_cols=96 Identities=14% Similarity=0.185 Sum_probs=57.0
Q ss_pred cCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHhCCCc
Q 017460 182 ADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 182 ~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~v~~~~~gg~ 257 (371)
....++.+||-+|+|. |..+..+++ .|. +|++++.++.-.+.+++ .+.. +... ..+.. .. . ..+.+
T Consensus 26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~--~~d~~-~~-~-~~~~f 95 (195)
T TIGR00477 26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTD--AYDIN-AA-A-LNEDY 95 (195)
T ss_pred hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeE--eccch-hc-c-ccCCC
Confidence 3444567899998753 666666665 487 99999999987766543 2322 1000 00110 00 1 12379
Q ss_pred cEEEEcCC-----C---hHHHHHHHHHhccCCceEEEec
Q 017460 258 DYSFECIG-----D---TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 258 dvVid~~g-----~---~~~l~~~~~~l~~~~G~~v~~g 288 (371)
|+|+.... . ...++.+.+.|+++ |.++.+.
T Consensus 96 D~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 96 DFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred CEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 99976422 1 23567888889998 9865543
No 305
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.32 E-value=0.16 Score=47.14 Aligned_cols=87 Identities=25% Similarity=0.369 Sum_probs=54.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++.... ....+|... .++.+.+. ..|+|+-+..
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~ell~-----~aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLEELLR-----ESDFVSLHVP 213 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 999998875443 233444320 11222221 3567666665
Q ss_pred ChH----HH-HHHHHHhccCCceEEEec
Q 017460 266 DTG----MI-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 ~~~----~l-~~~~~~l~~~~G~~v~~g 288 (371)
.+. .+ ...+..++++ ..++.++
T Consensus 214 ~t~~T~~~i~~~~~~~mk~g-a~lIN~a 240 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPT-AILVNTA 240 (333)
T ss_pred CChHHhhccCHHHHhcCCCC-eEEEECc
Confidence 322 11 3445556664 5555554
No 306
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=95.31 E-value=0.91 Score=39.36 Aligned_cols=113 Identities=12% Similarity=0.097 Sum_probs=64.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
++.+|||+|+|.++.-=+..+...|+ +|.++...-. ....+.+.|.-..+... +... .+ .++++||-++
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~r~-----~~~~--dl--~g~~LViaAT 93 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIKGN-----YDKE--FI--KDKHLIVIAT 93 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEeCC-----CChH--Hh--CCCcEEEECC
Confidence 47799999999999888888888999 8888754332 22233333433333221 1110 01 3799999999
Q ss_pred CChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeee-ccEEE
Q 017460 265 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLS-GRTLK 310 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~i~ 310 (371)
+++. ++..+...+...+.++..........+-++... .+ .+++.
T Consensus 94 dD~~-vN~~I~~~a~~~~~lvn~vd~p~~~dFi~PAiv-~rg~l~Ia 138 (223)
T PRK05562 94 DDEK-LNNKIRKHCDRLYKLYIDCSDYKKGLCIIPYQR-STKNFVFA 138 (223)
T ss_pred CCHH-HHHHHHHHHHHcCCeEEEcCCcccCeEEeeeEE-ecCCEEEE
Confidence 9864 555444444322666665443333344444332 23 45553
No 307
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.31 E-value=0.27 Score=43.03 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=30.5
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.+|+|+|.|++|..++..+-..|..+++.++.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 46799999999999999999889998999887654
No 308
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.4 Score=42.00 Aligned_cols=79 Identities=15% Similarity=0.190 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh-hHH----HHHHcCCc-eE--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVT-EF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~-~~~----~~~~lg~~-~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|+ |.+|...+..+...|+ +++.+.++.. +.+ .+++.+.. .. +|..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVAD-AAAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 9999999999999999 7777655433 222 22333432 12 24431 2233333333221
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|++|.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 309
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.30 E-value=0.15 Score=45.26 Aligned_cols=79 Identities=20% Similarity=0.326 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh--HHHHHHcCCce---EeCCCCCCchHHHHHHHHhC--CCc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK--CEKAKAFGVTE---FLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~--~~~~~~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
+++++||+|+ +++|.+.++.+...|+ +|+++.++... .+.+++.+... .+|..+ .++..+.+.+... +++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4788999986 8999999999888999 88888775432 22334455422 235542 3334444443322 379
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+++.+.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999998873
No 310
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=95.29 E-value=0.22 Score=44.59 Aligned_cols=128 Identities=16% Similarity=0.171 Sum_probs=82.4
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-C-CCC-------CCchHHHHHHHHh
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-N-PND-------NNEPVQQVIKRIT 253 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~-~~~-------~~~~~~~~v~~~~ 253 (371)
..-++..+|+.|.|..|+.++..++.+|+ .|...+..+.+.+..+.+|+...- + ... -.++|...-.++.
T Consensus 160 gtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 160 GTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred ccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 34456788999999999999999999999 888888888888888878774321 1 110 0123433333332
Q ss_pred -CC--CccEEEEcCC--C---hH-HHHHHHHHhccCCceEEEecCCCCCC-eeecchhee-eeccEEEec
Q 017460 254 -DG--GADYSFECIG--D---TG-MITTALQSCCDGWGLAVTLGVPKLKP-EVAAHYGLF-LSGRTLKGS 312 (371)
Q Consensus 254 -~g--g~dvVid~~g--~---~~-~l~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~-~~~~~i~g~ 312 (371)
.. ++|+||-+.- + +. .-++.+..+++| ..++.+....+.. ....+.... .++.+|+|.
T Consensus 239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~ 307 (356)
T COG3288 239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGY 307 (356)
T ss_pred HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEee
Confidence 22 8999998753 2 11 246778899997 9999987654421 222222222 237788776
No 311
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.38 Score=43.70 Aligned_cols=80 Identities=20% Similarity=0.188 Sum_probs=48.9
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHHcCCce-E--eCCCCCCchHHHHHHHHhC-
Q 017460 185 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVTE-F--LNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 185 ~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~-~~----~~~~lg~~~-v--i~~~~~~~~~~~~v~~~~~- 254 (371)
-++.++||+|+ |.+|...+..+...|+ +|+.+.++.++ .+ .++..+... + .|..+ ...+.+.+.+...
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~i~~~ 121 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSD-EAFCKDAVEETVRE 121 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 34788999986 8999998888888899 88888776432 21 223334322 2 24431 2223333333222
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+++|++|.+.|.
T Consensus 122 ~~~iD~lI~~Ag~ 134 (290)
T PRK06701 122 LGRLDILVNNAAF 134 (290)
T ss_pred cCCCCEEEECCcc
Confidence 378999988763
No 312
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.28 E-value=0.13 Score=45.78 Aligned_cols=78 Identities=19% Similarity=0.354 Sum_probs=49.3
Q ss_pred CCCEEEEEccC---hHHHHHHHHHHHcCCCEEEEEcCChhhHH---HH-HHcCCceE--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCE---KA-KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Gag---~~G~~ai~la~~~G~~~vi~~~~~~~~~~---~~-~~lg~~~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
+|+++||+|++ ++|.+.+..+...|+ +|+.+.++++..+ .+ ++++.... .|..+ .++....+.....
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVRE-PGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCC-HHHHHHHHHHHHHHc
Confidence 47889999853 899999988888999 8888888754322 22 33443222 34431 2333333333322
Q ss_pred CCccEEEEcCC
Q 017460 255 GGADYSFECIG 265 (371)
Q Consensus 255 gg~dvVid~~g 265 (371)
+.+|+++.+.|
T Consensus 87 g~ld~lv~nAg 97 (258)
T PRK07533 87 GRLDFLLHSIA 97 (258)
T ss_pred CCCCEEEEcCc
Confidence 37899999876
No 313
>PRK08589 short chain dehydrogenase; Validated
Probab=95.28 E-value=0.11 Score=46.67 Aligned_cols=79 Identities=23% Similarity=0.329 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---HcCCc---eEeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVT---EFLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~---~lg~~---~vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ +++|.+.+..+...|+ +|+++.++++-.+.++ +.+.. ...|..+ .......+.+... ++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4779999986 8999999888888899 9999988833222233 23321 1235441 2333333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998863
No 314
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.28 E-value=0.078 Score=48.05 Aligned_cols=42 Identities=26% Similarity=0.384 Sum_probs=37.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 227 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~ 227 (371)
.+.+|+|+|+|++|.+++..+...|+++|++++++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 467999999999999999999999998999999999887765
No 315
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=95.27 E-value=0.18 Score=44.67 Aligned_cols=79 Identities=28% Similarity=0.403 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+.+ +..+... . .|..+ ...+.+.+..... +
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999986 8999999998888999 999999987765443 2223221 2 24431 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 316
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=95.26 E-value=0.14 Score=45.47 Aligned_cols=79 Identities=23% Similarity=0.378 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc---eEeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT---EFLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~---~vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +.+.. ...|..+ ...+.+.+.+... +
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4789999985 9999999998888999 9999999887765543 23322 1234441 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 317
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.25 E-value=0.13 Score=45.33 Aligned_cols=76 Identities=14% Similarity=0.279 Sum_probs=51.8
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce---EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE---FLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~---vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
+++|+|+ |.+|.+.+..+...|+ +|+++++++++.+.+.+ ++... ..|..+ ...+.+.+.+... +++|+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6899986 9999999999988999 99999999887766533 44321 234431 2334444443332 3799999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98764
No 318
>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating). Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.
Probab=95.23 E-value=0.3 Score=44.10 Aligned_cols=87 Identities=18% Similarity=0.276 Sum_probs=56.3
Q ss_pred EEEEEccChHHHHH-HHHHHHcCCCEEEEE-cCChhh--HHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 189 TVVIFGLGTVGLSV-AQGAKARGASRIIGV-DTNPEK--CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~~G~~a-i~la~~~G~~~vi~~-~~~~~~--~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
+|.|+|+|.+|... ..+.+..++ ++.++ +.++++ ++.++++|.....+ ++...+. ...+|+|++++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~---~~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLA---NPDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhc---CCCCCEEEECC
Confidence 58899999999854 556655577 55554 445543 45678888754432 2222221 12799999999
Q ss_pred CChHHHHHHHHHhccCCceEEEe
Q 017460 265 GDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
+...+.+.+..++.. |..+..
T Consensus 73 p~~~H~e~a~~al~a--Gk~VId 93 (285)
T TIGR03215 73 SAKAHARHARLLAEL--GKIVID 93 (285)
T ss_pred CcHHHHHHHHHHHHc--CCEEEE
Confidence 987777777777776 554443
No 319
>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B.
Probab=95.23 E-value=0.021 Score=29.92 Aligned_cols=22 Identities=36% Similarity=0.277 Sum_probs=15.8
Q ss_pred eeEEEEecCCCCeEEEEeecCCC
Q 017460 13 CKAAVAWGAGQPLVVEEVEVNPP 35 (371)
Q Consensus 13 ~~a~~~~~~~~~l~~~~~~~p~~ 35 (371)
|||++++++++ .+++++|.|.+
T Consensus 1 MkAv~y~G~~~-v~ve~VpdP~I 22 (23)
T PF13823_consen 1 MKAVVYHGPKD-VRVEEVPDPKI 22 (23)
T ss_dssp -EEEEEEETTE-EEEEEE----S
T ss_pred CcceEEeCCCc-eEEEECCCccc
Confidence 89999999988 99999999975
No 320
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.23 E-value=0.15 Score=45.29 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCC-hhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~-~~~~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
.+.++||+|+ |++|.+.++.+...|+ +|+++.++ ++..+.+++.+... ..|..+ .....+.+.+... +++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4688999986 9999999998888999 78776544 34444454444432 235441 2334444443322 379999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
No 321
>PRK06138 short chain dehydrogenase; Provisional
Probab=95.23 E-value=0.13 Score=45.45 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-Hc--CCc-eE--eCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AF--GVT-EF--LNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~l--g~~-~v--i~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++ +.. .. .|..+ .....+.+..... ++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~ 81 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGS-AEAVEALVDFVAARWGR 81 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999986 9999998888878898 8999998877654432 22 321 12 24431 2233333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 82 id~vi~~ag~ 91 (252)
T PRK06138 82 LDVLVNNAGF 91 (252)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 322
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.21 E-value=0.2 Score=44.04 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=65.7
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHH----cCCceEeCCCCCCchHHHHHHHHh-
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKA----FGVTEFLNPNDNNEPVQQVIKRIT- 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~----lg~~~vi~~~~~~~~~~~~v~~~~- 253 (371)
...+..++++||-+|.| .|..++.+++.++ ..+|++++.+++..+.+++ .|...-+... ..+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~-~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVF-TGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCc-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHh
Confidence 34566778899999864 3566666676653 3499999999988777643 5543212111 223444444442
Q ss_pred ---CCCccEEEEcCCC---hHHHHHHHHHhccCCceEEEe
Q 017460 254 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ---~gg~dvVid~~g~---~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.||+||--... ...++.+++.+++| |.++.-
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 2379998744321 23577889999997 877654
No 323
>PRK06181 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.14 Score=45.58 Aligned_cols=78 Identities=22% Similarity=0.308 Sum_probs=51.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--CC
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
+.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ +..+... ..|..+ ...+...+..... ++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSD-AEACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 357899986 9999999999989999 999999987765433 2234321 224431 2333333433322 36
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|+||.+.|.
T Consensus 79 id~vi~~ag~ 88 (263)
T PRK06181 79 IDILVNNAGI 88 (263)
T ss_pred CCEEEECCCc
Confidence 8999999863
No 324
>PRK08251 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.17 Score=44.60 Aligned_cols=77 Identities=26% Similarity=0.399 Sum_probs=51.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----c--CCc-e--EeCCCCCCchHHHHHHHHhC--
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----F--GVT-E--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----l--g~~-~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ . +.. . ..|..+ ...+.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 467999986 9999998888878898 89999998877655422 1 221 1 235542 2344444444332
Q ss_pred CCccEEEEcCC
Q 017460 255 GGADYSFECIG 265 (371)
Q Consensus 255 gg~dvVid~~g 265 (371)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999886
No 325
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.20 E-value=0.22 Score=39.96 Aligned_cols=32 Identities=28% Similarity=0.511 Sum_probs=28.4
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
+|+|+|+|++|...+..+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48999999999999999999999888888755
No 326
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.19 E-value=0.13 Score=45.41 Aligned_cols=35 Identities=31% Similarity=0.456 Sum_probs=30.6
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.+|+|.|+|++|..++..+...|.++++.++.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 47899999999999999999999998888887644
No 327
>PRK07985 oxidoreductase; Provisional
Probab=95.18 E-value=0.34 Score=44.15 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=62.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh--hhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP--EKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~--~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~- 254 (371)
++.++||+|+ |++|.+.++.+...|+ +|+.+.++. ++.+.+ ++.+... ..|..+ .+.....+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5678999986 8999999998888999 888876542 233222 2334321 234441 2333344444332
Q ss_pred -CCccEEEEcCCCh--------------------------HHHHHHHHHhccCCceEEEecCCC
Q 017460 255 -GGADYSFECIGDT--------------------------GMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 255 -gg~dvVid~~g~~--------------------------~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
+++|+++.+.|.. ..++.++..+..+ |+++.+++..
T Consensus 126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~ 188 (294)
T PRK07985 126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ 188 (294)
T ss_pred hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence 3789999887631 1123344445566 8999887653
No 328
>PRK05875 short chain dehydrogenase; Provisional
Probab=95.16 E-value=0.16 Score=45.62 Aligned_cols=78 Identities=26% Similarity=0.412 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HH---cC--Cc-eE--eCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---FG--VT-EF--LNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~---lg--~~-~v--i~~~~~~~~~~~~v~~~~~- 254 (371)
++.++||.|+ |.+|...++.+...|+ +|+.+.+++++.+.. .+ .+ .. .+ .|..+ .......+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 3689999986 8999999999999999 899998887765433 22 21 11 12 24431 2233333333322
Q ss_pred -CCccEEEEcCC
Q 017460 255 -GGADYSFECIG 265 (371)
Q Consensus 255 -gg~dvVid~~g 265 (371)
+++|++|.+.|
T Consensus 84 ~~~~d~li~~ag 95 (276)
T PRK05875 84 HGRLHGVVHCAG 95 (276)
T ss_pred cCCCCEEEECCC
Confidence 37899999887
No 329
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.16 E-value=0.15 Score=45.51 Aligned_cols=79 Identities=16% Similarity=0.291 Sum_probs=49.8
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||.|+ +++|.+.+..+...|+ +|+.+.++++..+.++ ++|... ..|..+ .++..+.+.+...
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVAS-DDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCC-HHHHHHHHHHHHHHh
Confidence 5788999983 5899999888888999 8888766543333332 234322 234442 3344444444332
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|+++++.|.
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 379999998864
No 330
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.15 E-value=0.18 Score=44.73 Aligned_cols=78 Identities=23% Similarity=0.437 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcCCc-e--EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFGVT-E--FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
.+.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +++.. . ..|..+ .......+.+... +.+|
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTR-QDSIDRIVAAAVERFGGID 82 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 3678999986 9999999999988999 9999999888766553 34321 1 224331 2333333333322 3789
Q ss_pred EEEEcCC
Q 017460 259 YSFECIG 265 (371)
Q Consensus 259 vVid~~g 265 (371)
+++.+.+
T Consensus 83 ~li~~ag 89 (257)
T PRK07067 83 ILFNNAA 89 (257)
T ss_pred EEEECCC
Confidence 9999876
No 331
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.14 E-value=0.13 Score=45.78 Aligned_cols=77 Identities=25% Similarity=0.340 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----H-cCCc-eE--eCCCCCCchHHHHHHHHhCCC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----A-FGVT-EF--LNPNDNNEPVQQVIKRITDGG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~-lg~~-~v--i~~~~~~~~~~~~v~~~~~gg 256 (371)
.+.++||.|+ +++|...++.+...|+ +|+++++++++.+.+. + .+.. .. .|..+ ...+.+.+... +.
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~--g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS-PEAREQLAAEA--GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHh--CC
Confidence 4789999986 8999999998888999 9999999887765532 1 2321 12 34431 22222222221 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 82 id~lv~~ag~ 91 (259)
T PRK06125 82 IDILVNNAGA 91 (259)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 332
>PRK09242 tropinone reductase; Provisional
Probab=95.12 E-value=0.11 Score=46.23 Aligned_cols=79 Identities=20% Similarity=0.311 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-H---c--CCce---EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-A---F--GVTE---FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~---l--g~~~---vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.++||+|+ |++|...+..+...|+ +|++++++.++.+.+. + . +... ..|..+ .......+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4789999986 8999999999988999 8999999887765442 2 2 2211 224431 2233333333322
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 379999999974
No 333
>PRK05854 short chain dehydrogenase; Provisional
Probab=95.12 E-value=0.17 Score=46.61 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=51.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCc-e--EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-E--FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l-----g~~-~--vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.+++|+|+ +++|.+.+..+...|+ +|+.+.++.++.+.+ .++ +.. . .+|..+ .......+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 3678999986 8999999988888899 999999988765543 221 111 1 235441 2223333333322
Q ss_pred -CCccEEEEcCCC
Q 017460 255 -GGADYSFECIGD 266 (371)
Q Consensus 255 -gg~dvVid~~g~ 266 (371)
+.+|++|.+.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 378999998763
No 334
>PRK06484 short chain dehydrogenase; Validated
Probab=95.12 E-value=0.13 Score=50.95 Aligned_cols=79 Identities=18% Similarity=0.356 Sum_probs=55.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCce---EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTE---FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||+|+ +++|.+.++.+...|+ +|+.+.++.++.+.+ ++++... .+|..+ ...+...+.+... +++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5788999986 8999999999999999 999999988876554 4565432 235442 3334444444332 3799
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99998764
No 335
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.12 E-value=0.18 Score=45.50 Aligned_cols=104 Identities=18% Similarity=0.260 Sum_probs=66.0
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HHcCCce--EeCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTE--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~~---~~~~~-~~lg~~~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
.++++||+|+ +++|++.++.+...|+ +|+.+.++.+ +.+.+ ++++... ..|..+ .+.....+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4788999985 4899999988888999 8988888753 33322 4455332 235542 3334444444432
Q ss_pred CCccEEEEcCCCh--------------H---------------HHHHHHHHhccCCceEEEecCCCC
Q 017460 255 GGADYSFECIGDT--------------G---------------MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 255 gg~dvVid~~g~~--------------~---------------~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+.+|++|++.|.. + ..+..+..+..+ |+++.+++...
T Consensus 82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~~ 147 (274)
T PRK08415 82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLGG 147 (274)
T ss_pred CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCCC
Confidence 3799999988731 0 123445556676 99998876543
No 336
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.12 E-value=0.12 Score=52.20 Aligned_cols=77 Identities=21% Similarity=0.401 Sum_probs=59.1
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-CCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.++|+|.|.|.+|+..++.++..|. ++++++.++++.+.+++.|...++ |.+ +. +.+++.--..+|.++-+++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat--~~---~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYGDAT--RM---DLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEEeCC--CH---HHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999999 999999999999999999876544 332 22 2233321127899999998
Q ss_pred ChHH
Q 017460 266 DTGM 269 (371)
Q Consensus 266 ~~~~ 269 (371)
+++.
T Consensus 474 d~~~ 477 (621)
T PRK03562 474 DPQT 477 (621)
T ss_pred CHHH
Confidence 7543
No 337
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.10 E-value=0.17 Score=44.77 Aligned_cols=35 Identities=29% Similarity=0.448 Sum_probs=30.4
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
..+|+|+|+|++|..++..+...|.+++..++.+.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 57899999999999999999999998888886543
No 338
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.11 Score=45.92 Aligned_cols=77 Identities=18% Similarity=0.281 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
.+.++||+|+ |++|...++.+...|+ +|+++++++++. .....+. ...|..+ ...+.+.+..... +.+|++|
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 80 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDVLV 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999986 8999999998888999 999998887651 1111121 1234431 2233333333322 3789999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 81 ~~ag~ 85 (252)
T PRK07856 81 NNAGG 85 (252)
T ss_pred ECCCC
Confidence 98873
No 339
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.10 E-value=0.39 Score=42.72 Aligned_cols=95 Identities=19% Similarity=0.218 Sum_probs=66.3
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHc-CCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHh-CCCc
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKAR-GASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRIT-DGGA 257 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~-G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~-~gg~ 257 (371)
......++.+||-+|+|. |..+..+++.. +. +|++++.++...+.+++.+++.+. . +. ..+. .+.|
T Consensus 23 ~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~-~-----d~----~~~~~~~~f 90 (255)
T PRK14103 23 ARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART-G-----DV----RDWKPKPDT 90 (255)
T ss_pred HhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE-c-----Ch----hhCCCCCCc
Confidence 445667889999998865 66677777765 56 999999999999888876654222 1 11 1122 2379
Q ss_pred cEEEEcCC-----C-hHHHHHHHHHhccCCceEEEe
Q 017460 258 DYSFECIG-----D-TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 258 dvVid~~g-----~-~~~l~~~~~~l~~~~G~~v~~ 287 (371)
|+|+-... . ...+..+.+.|+++ |.++..
T Consensus 91 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 91 DVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred eEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 99987442 2 23577888899998 998764
No 340
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.10 E-value=0.12 Score=51.65 Aligned_cols=75 Identities=16% Similarity=0.313 Sum_probs=56.6
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCCh
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
++++|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...+.-.-+ + .+.+++.--..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~-~---~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA-N---EEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC-C---HHHHHhcCccccCEEEEEcCCh
Confidence 689999999999999999999998 9999999999999999988766553211 2 2223332112789888777654
No 341
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.10 E-value=0.15 Score=45.82 Aligned_cols=77 Identities=19% Similarity=0.300 Sum_probs=51.3
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCC---ce--EeCCCCCCchHHHHHHHHhC--
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGV---TE--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~---~~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. ..+. .. ..|..+ .+.+.. +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 568999986 9999999998888899 9999988887665442 2221 11 225542 233333 444322
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 378999998864
No 342
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.09 E-value=0.34 Score=45.45 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=62.0
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHc--CCCEEEEEc--CChhhH-HHHHHcCCceEeCCCCCCchHHHHH------------
Q 017460 188 STVVIFGL-GTVGLSVAQGAKAR--GASRIIGVD--TNPEKC-EKAKAFGVTEFLNPNDNNEPVQQVI------------ 249 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~--G~~~vi~~~--~~~~~~-~~~~~lg~~~vi~~~~~~~~~~~~v------------ 249 (371)
.+|.|+|+ |++|..++.+.+.. .+ +|+++. ++.+++ +.++++++..++-.+ +.....+
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~---~~~~~~l~~~l~~~~~~v~ 77 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVAD---EEAAKELKEALAAAGIEVL 77 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcC---HHHHHHHHHhhccCCceEE
Confidence 47899995 99999999988765 56 777774 444444 345778887655332 1222222
Q ss_pred ------HHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 250 ------KRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 250 ------~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.++... .+|+|+.++++...+...+.+++. |+-+.+
T Consensus 78 ~G~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~a--GK~VaL 120 (385)
T PRK05447 78 AGEEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRA--GKRIAL 120 (385)
T ss_pred EChhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHC--CCcEEE
Confidence 233333 689999999886678888888887 444444
No 343
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.08 E-value=0.14 Score=45.42 Aligned_cols=72 Identities=21% Similarity=0.309 Sum_probs=46.4
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCce--EeCCCCCCchHHHHHHHHhCCCccEEEE
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYSFE 262 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~--vi~~~~~~~~~~~~v~~~~~gg~dvVid 262 (371)
+.++||+|+ |++|.+.++.+...|+ +|+++++++. +.+... .+... ..|.. +. +.+.+.. +++|++|+
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~--~~---~~~~~~~-~~iDilVn 85 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECG--KE---ESLDKQL-ASLDVLIL 85 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCC--CH---HHHHHhc-CCCCEEEE
Confidence 678999986 8999999998888999 8998888762 222211 11112 23443 11 1223322 36999999
Q ss_pred cCCC
Q 017460 263 CIGD 266 (371)
Q Consensus 263 ~~g~ 266 (371)
+.|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9874
No 344
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.08 E-value=0.095 Score=47.40 Aligned_cols=43 Identities=26% Similarity=0.353 Sum_probs=37.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA 227 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~ 227 (371)
.++.++||+|+|+.+.+++.-+...|+++++++.|+.+|.+.+
T Consensus 125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 3478999999999999999888889998999999999887666
No 345
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.07 E-value=0.17 Score=44.13 Aligned_cols=78 Identities=17% Similarity=0.205 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ +++|.+.+..+...|+ +|+.+.+++++.+.+ ++.+... ..|..+ .++..+.+.+... +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFS-QESIRHLFDAIEQQFN 81 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999986 7899998888888999 899999988876543 3345332 224331 3333333333322 3
Q ss_pred -CccEEEEcCC
Q 017460 256 -GADYSFECIG 265 (371)
Q Consensus 256 -g~dvVid~~g 265 (371)
.+|++|.+.|
T Consensus 82 ~~iD~li~nag 92 (227)
T PRK08862 82 RAPDVLVNNWT 92 (227)
T ss_pred CCCCEEEECCc
Confidence 6999999986
No 346
>PLN03139 formate dehydrogenase; Provisional
Probab=95.07 E-value=0.23 Score=46.92 Aligned_cols=89 Identities=20% Similarity=0.137 Sum_probs=55.9
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++....+..++.|+..+ .++.+.+. ..|+|+-+..
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell~-----~sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLDAMLP-----KCDVVVINTP 264 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHHHHHh-----hCCEEEEeCC
Confidence 57899999999999999999999999 99999887544444455554211 12222221 3566666555
Q ss_pred ChHH----H-HHHHHHhccCCceEEEec
Q 017460 266 DTGM----I-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 ~~~~----l-~~~~~~l~~~~G~~v~~g 288 (371)
.... + ...+..++++ ..+|.++
T Consensus 265 lt~~T~~li~~~~l~~mk~g-a~lIN~a 291 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKG-VLIVNNA 291 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCC-eEEEECC
Confidence 3221 1 2345556664 5555554
No 347
>PRK07035 short chain dehydrogenase; Provisional
Probab=95.06 E-value=0.16 Score=44.83 Aligned_cols=78 Identities=19% Similarity=0.312 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ |.+|.+.++.+...|+ +|+.++++.++.+.+. +.+.. .. .|..+ .....+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999985 8999999999988999 9999999877655442 22322 12 24431 2333333333322 2
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
.+|+++.+.+
T Consensus 85 ~id~li~~ag 94 (252)
T PRK07035 85 RLDILVNNAA 94 (252)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 348
>PRK08264 short chain dehydrogenase; Validated
Probab=95.05 E-value=0.11 Score=45.37 Aligned_cols=75 Identities=21% Similarity=0.332 Sum_probs=49.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eE--eCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EF--LNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~v--i~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
.+.++||+|+ |.+|...+..+...|+.+|+++.++.++.+. .+.. .+ .|..+ ...+.+.+.. . +.+|+||
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~-~~~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD-PASVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC-HHHHHHHHHh-c-CCCCEEE
Confidence 4678999985 9999999999988998688888888776543 3221 12 24431 1222222221 1 2689999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98876
No 349
>PLN00203 glutamyl-tRNA reductase
Probab=95.05 E-value=0.12 Score=50.78 Aligned_cols=96 Identities=18% Similarity=0.347 Sum_probs=62.1
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH-HcC-Cce-EeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK-AFG-VTE-FLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~-~lg-~~~-vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++ ... +... .+..+.+ ..+|+||.|
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~----~dl~~al-----~~aDVVIsA 336 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPL----DEMLACA-----AEADVVFTS 336 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecH----hhHHHHH-----hcCCEEEEc
Confidence 688999999999999999999999878999999998877664 453 221 1111 1111111 268999999
Q ss_pred CCChHH--HHHHHHHhccC---Cc---eEEEecCCC
Q 017460 264 IGDTGM--ITTALQSCCDG---WG---LAVTLGVPK 291 (371)
Q Consensus 264 ~g~~~~--l~~~~~~l~~~---~G---~~v~~g~~~ 291 (371)
++.... ....++.+.+. .+ .++.++.+.
T Consensus 337 T~s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR 372 (519)
T PLN00203 337 TSSETPLFLKEHVEALPPASDTVGGKRLFVDISVPR 372 (519)
T ss_pred cCCCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence 876542 23344443211 02 366777664
No 350
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.04 E-value=0.23 Score=44.88 Aligned_cols=77 Identities=17% Similarity=0.241 Sum_probs=55.3
Q ss_pred CCCCCEEEEEccCh-HHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEE
Q 017460 184 ISKGSTVVIFGLGT-VGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 262 (371)
Q Consensus 184 ~~~~~~VlI~Gag~-~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid 262 (371)
.-.|.+|+|+|+|. +|...+.++...|+ .|+++.+... ++.+.+ ..+|+||.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------NLPELV-----KQADIIVG 208 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------hHHHHh-----ccCCEEEE
Confidence 35689999999876 99999999999999 8888865221 111111 26899999
Q ss_pred cCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 263 CIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 263 ~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
++|.+..+. .+.++++ ..++.+|..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998765433 3557886 777788754
No 351
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.04 E-value=0.2 Score=44.45 Aligned_cols=79 Identities=16% Similarity=0.263 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh-HH----HHHHcCCc-e--EeCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CE----KAKAFGVT-E--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~-~~----~~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|+ +++|.+.++.+...|+ +|+++++++++ .+ .+++.+.. . ..|..+ .....+.+.+...
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 84 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTS-KADLRAAVARTEAEL 84 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 8999999999988999 89888876532 22 22333432 1 224431 2333333333322
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+.+|++|.+.|.
T Consensus 85 g~id~li~~ag~ 96 (254)
T PRK06114 85 GALTLAVNAAGI 96 (254)
T ss_pred CCCCEEEECCCC
Confidence 378999998874
No 352
>PLN02476 O-methyltransferase
Probab=95.02 E-value=0.27 Score=44.14 Aligned_cols=104 Identities=17% Similarity=0.192 Sum_probs=66.5
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHH----HHcCCceEeCCCCCCchHHHHHHHHh-
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKA----KAFGVTEFLNPNDNNEPVQQVIKRIT- 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~----~~lg~~~vi~~~~~~~~~~~~v~~~~- 253 (371)
...+..+..+||-+|.+ +|..++.+|+.++. .+|++++.+++..+.+ ++.|...-+... ..+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~-tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li--~GdA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVGVY-TGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVK--HGLAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EcCHHHHHHHHHh
Confidence 34566778999999863 36666677776632 2799999999887777 446664322221 233444454442
Q ss_pred ---CCCccEEEEcCCC---hHHHHHHHHHhccCCceEEEe
Q 017460 254 ---DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ---~gg~dvVid~~g~---~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.||.||--... ...++.+++.++++ |.++.=
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~D 227 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMD 227 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEe
Confidence 2379998643332 23478889999997 887654
No 353
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.24 Score=42.79 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=47.2
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCceEe--CCCCCCchHHHHHHHHhCC--CccEEE
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTEFL--NPNDNNEPVQQVIKRITDG--GADYSF 261 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~vi--~~~~~~~~~~~~v~~~~~g--g~dvVi 261 (371)
.++||+|+ |.+|...+..+... + +|+++++++++.+.+.+ +....++ |.. + .+.+.+.... ++|.||
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~--~---~~~~~~~~~~~~~id~vi 76 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLT--D---PEAIAAAVEQLGRLDVLV 76 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCC--C---HHHHHHHHHhcCCCCEEE
Confidence 57999986 99999888777666 6 89999998877665543 2111222 333 2 2334444333 699999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 77 ~~ag~ 81 (227)
T PRK08219 77 HNAGV 81 (227)
T ss_pred ECCCc
Confidence 98874
No 354
>PRK08643 acetoin reductase; Validated
Probab=95.01 E-value=0.17 Score=44.86 Aligned_cols=78 Identities=19% Similarity=0.304 Sum_probs=51.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--CC
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+... ..|..+ .+...+.+.+... ++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 568899986 8999999999888999 999999887765443 2223221 224431 2233333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 355
>PRK00536 speE spermidine synthase; Provisional
Probab=95.01 E-value=0.1 Score=46.35 Aligned_cols=99 Identities=13% Similarity=-0.051 Sum_probs=65.0
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eEeCCCCCCchHHHHHHHHhCCCccEE-
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPNDNNEPVQQVIKRITDGGADYS- 260 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~vi~~~~~~~~~~~~v~~~~~gg~dvV- 260 (371)
..+.++|||+|+|- |.++-.++|+- ++|..++.+++=.+.++++-.. ..++.. .-.+...+.+...+.||+|
T Consensus 70 h~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~Dp--Rv~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 70 KKELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNK--NFTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCC--CEEEeehhhhccCCcCCEEE
Confidence 35568999998765 55677888886 3999999999988888873221 112111 1111112333333479996
Q ss_pred EEcCCChHHHHHHHHHhccCCceEEEec
Q 017460 261 FECIGDTGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 261 id~~g~~~~l~~~~~~l~~~~G~~v~~g 288 (371)
+|+.-..+-.+.+.++|+++ |.++.-+
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs 171 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVA 171 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECC
Confidence 56565556677889999998 9988754
No 356
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.99 E-value=0.22 Score=45.17 Aligned_cols=56 Identities=27% Similarity=0.274 Sum_probs=46.9
Q ss_pred hhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEcC---ChhhHHHHHHcCCceEe
Q 017460 180 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVDT---NPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 180 ~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~~---~~~~~~~~~~lg~~~vi 236 (371)
....+.+|.++||=. +|..|...+-.+...|+ +++++.. +.+|+..+++||++.+.
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~ 155 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIIL 155 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEe
Confidence 456789999999997 59999999999999999 8888755 55888899999997543
No 357
>PRK07577 short chain dehydrogenase; Provisional
Probab=94.99 E-value=0.13 Score=44.86 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=50.1
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhCC-CccEEEEc
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITDG-GADYSFEC 263 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~ 263 (371)
+.++||.|+ |.+|...+..+...|+ +|+++.++.++. +... ...|..+ ...+.+.+.+.... ++|++|.+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAIDD-----FPGELFACDLAD-IEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCcccc-----cCceEEEeeCCC-HHHHHHHHHHHHHhCCCcEEEEC
Confidence 578999986 9999999998888998 999998876551 2211 2234431 33444445554444 78999998
Q ss_pred CCC
Q 017460 264 IGD 266 (371)
Q Consensus 264 ~g~ 266 (371)
.|.
T Consensus 76 ag~ 78 (234)
T PRK07577 76 VGI 78 (234)
T ss_pred CCC
Confidence 874
No 358
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=94.98 E-value=0.12 Score=42.37 Aligned_cols=78 Identities=27% Similarity=0.383 Sum_probs=48.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCC--hhhHHHH----HHcCCce-Ee--CCCCCCchHHHHHHHHh--CC
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN--PEKCEKA----KAFGVTE-FL--NPNDNNEPVQQVIKRIT--DG 255 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~--~~~~~~~----~~lg~~~-vi--~~~~~~~~~~~~v~~~~--~g 255 (371)
+++||+|+ +++|+..++.+...|..+|+.+.++ .++.+.+ +..+... ++ |..+ .++....+.+.. .+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSD-PESIRALIEEVIKRFG 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTS-HHHHHHHHHHHHHHHS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 36899986 8999998887777776588888888 3433332 4445422 22 3331 233444444443 23
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|++|.+.|.
T Consensus 80 ~ld~li~~ag~ 90 (167)
T PF00106_consen 80 PLDILINNAGI 90 (167)
T ss_dssp SESEEEEECSC
T ss_pred ccccccccccc
Confidence 79999998875
No 359
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=94.98 E-value=0.17 Score=46.64 Aligned_cols=78 Identities=24% Similarity=0.293 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC---Cc-e--EeCCCCCCchHHHHHHHHh--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VT-E--FLNPNDNNEPVQQVIKRIT--DG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg---~~-~--vi~~~~~~~~~~~~v~~~~--~g 255 (371)
++.++||+|+ |++|...++.+...|+ +|++++++.++.+.+ +++. .. . ..|..+ .......+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999986 9999999988888898 999999988776544 3332 11 1 234431 223333333322 12
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
++|++|.+.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999887
No 360
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.98 E-value=0.18 Score=44.96 Aligned_cols=78 Identities=18% Similarity=0.327 Sum_probs=49.1
Q ss_pred CCCEEEEEcc-C--hHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceE--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-G--TVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g--~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
.++++||+|+ + ++|.+.++.+...|+ +|+...+++...+.+ ++.|.... +|..+ .+...+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4688999986 4 799998888888899 888887764322222 23353322 35542 3344444444333
Q ss_pred CCccEEEEcCC
Q 017460 255 GGADYSFECIG 265 (371)
Q Consensus 255 gg~dvVid~~g 265 (371)
+.+|+++++.|
T Consensus 85 g~iDilVnnag 95 (260)
T PRK06603 85 GSFDFLLHGMA 95 (260)
T ss_pred CCccEEEEccc
Confidence 37999999876
No 361
>PLN02253 xanthoxin dehydrogenase
Probab=94.98 E-value=0.16 Score=45.78 Aligned_cols=79 Identities=18% Similarity=0.229 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCC--c-e--EeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGV--T-E--FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~--~-~--vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
.+.++||.|+ |++|.+.+..+...|+ +|+++++++++.+.+ .+++. . . ..|..+ ...+.+.+..... ++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 3678999985 9999998888888899 999998877655433 33321 1 1 234441 2233333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999998863
No 362
>PRK07074 short chain dehydrogenase; Provisional
Probab=94.96 E-value=0.2 Score=44.38 Aligned_cols=78 Identities=19% Similarity=0.318 Sum_probs=50.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC---Cce-EeCCCCCCchHHHHHHHHhC--CCcc
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG---VTE-FLNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg---~~~-vi~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
+.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+ .++. +.. ..|..+ ...+...+.+... +++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999986 8999998888888898 899999988776554 3232 211 234431 2223333333322 3689
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
No 363
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=94.96 E-value=0.19 Score=46.67 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=31.0
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.+|+|+|+|++|..++..+...|..++..++.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998888888764
No 364
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=94.94 E-value=0.2 Score=44.09 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-eEe--CCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EFL--NPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~vi--~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ |.+|...+..+...|+ +|++++++.++...+ ++.+.. .++ |..+ ...+.+.+.+... +
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRD-RAALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999986 9999999988888899 999999986654332 333322 122 4431 2233333333322 2
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|+||.+.+.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999998754
No 365
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.90 E-value=0.69 Score=40.65 Aligned_cols=103 Identities=18% Similarity=0.174 Sum_probs=60.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCC-hhhH----HHHHHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTN-PEKC----EKAKAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~-~~~~----~~~~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
+.++||.|+ |.+|...+.-+...|+ +++.+.++ +++. ..+++.+... . .|..+ ...+...+..+.. +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 678999986 8999998888888999 77665543 2322 2233444321 2 24431 2233333333322 3
Q ss_pred CccEEEEcCCCh----------H---------------HHHHHHHHhccCCceEEEecCCCC
Q 017460 256 GADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 256 g~dvVid~~g~~----------~---------------~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
++|+||.+.|.. . ..+.+.+.++.. |+++.+++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchhc
Confidence 789999998731 0 123444555665 89999887543
No 366
>PRK06101 short chain dehydrogenase; Provisional
Probab=94.90 E-value=0.25 Score=43.35 Aligned_cols=75 Identities=13% Similarity=0.174 Sum_probs=47.9
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcC--Cc-eEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFG--VT-EFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg--~~-~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+.+ .. ...|..+ .+++.+.+.+. ....|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~-~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQL-PFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhc-ccCCCEEEEc
Confidence 46899986 9999998888888899 8999999988877665433 21 1234441 23333333332 2245666655
Q ss_pred CC
Q 017460 264 IG 265 (371)
Q Consensus 264 ~g 265 (371)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 54
No 367
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.89 E-value=0.28 Score=44.49 Aligned_cols=94 Identities=18% Similarity=0.246 Sum_probs=65.3
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+||.....+..+ +..++ -.|.+|.|+|. +.+|.-.+.++...|+ .|++..+...
T Consensus 138 ~~PcTp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~--------------------- 194 (301)
T PRK14194 138 LTPCTPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRST--------------------- 194 (301)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 4555544444433 44444 46999999997 5999999999999999 8988865432
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
+..+.++ ..|+||-++|.+..+...+ ++++ ..++.+|..
T Consensus 195 ~l~e~~~-----~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin 233 (301)
T PRK14194 195 DAKALCR-----QADIVVAAVGRPRLIDADW--LKPG-AVVIDVGIN 233 (301)
T ss_pred CHHHHHh-----cCCEEEEecCChhcccHhh--ccCC-cEEEEeccc
Confidence 1111111 4799999999877666544 8886 788888754
No 368
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.87 E-value=0.18 Score=46.12 Aligned_cols=94 Identities=10% Similarity=0.028 Sum_probs=63.9
Q ss_pred CCCCEEEEEccChHHHHHHHHHH-HcCCCEEEEEcCChhhHHHH-HHcC---CceEeCCCCCCchHHHHHHHHhCCCccE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKA-KAFG---VTEFLNPNDNNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~-~~G~~~vi~~~~~~~~~~~~-~~lg---~~~vi~~~~~~~~~~~~v~~~~~gg~dv 259 (371)
....+++|+|+|..|.+.+..+. ..+.++|.+..+++++.+.+ .++. ..... .+..+.+ .++|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~~------~~~~~av-----~~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAEP------LDGEAIP-----EAVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeEE------CCHHHHh-----hcCCE
Confidence 45678999999999999888875 46877899999999887655 3342 22111 1232333 26999
Q ss_pred EEEcCCChHHHHHHHHHhccCCceEEEecCCCC
Q 017460 260 SFECIGDTGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 260 Vid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
|+.|+++...+-..+ ++++ -.+..+|....
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p 221 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP 221 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCCC
Confidence 999998765432332 6775 67777887654
No 369
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=94.86 E-value=0.2 Score=44.51 Aligned_cols=76 Identities=26% Similarity=0.404 Sum_probs=50.2
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCceE--eCCCCCCchHHHHHHHHhC--CCccE
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTEF--LNPNDNNEPVQQVIKRITD--GGADY 259 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~v--i~~~~~~~~~~~~v~~~~~--gg~dv 259 (371)
++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++.+.... .|..+ .++..+.+.+... +++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d-~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSD-KDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCC-HHHHHHHHHHHHHhcCCCCE
Confidence 6899986 8999999888888899 899999988775544 22232222 34431 2334444443322 37999
Q ss_pred EEEcCCC
Q 017460 260 SFECIGD 266 (371)
Q Consensus 260 Vid~~g~ 266 (371)
+|.+.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998874
No 370
>PRK06720 hypothetical protein; Provisional
Probab=94.84 E-value=0.32 Score=40.36 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=48.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++..++|.|+ +++|...+..+...|+ +|++++++.++.+.. ++.+... . .|..+ ...+.+.+.+... +
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~v~~~~~~~G 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEK-QGDWQRVISITLNAFS 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4778999986 7899998888888898 999998877654332 2334321 2 23321 2223333322221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 68888887763
No 371
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=94.84 E-value=0.25 Score=43.80 Aligned_cols=79 Identities=20% Similarity=0.324 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCc-e--EeCCCCCCchHHHHHHHHhC--CCc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVT-E--FLNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
+|.++||+|+ |++|.+.++.+...|+ +|+.++++.. ..+.+++++.. . ..|..+ .++..+.+.+... +.+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRK-IDGIPALLERAVAEFGHI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhCCC
Confidence 3678999986 8999999999988999 8888765432 22334444432 1 234431 2333333433322 379
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|++|.+.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999998874
No 372
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=94.83 E-value=0.25 Score=44.03 Aligned_cols=79 Identities=27% Similarity=0.410 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ +++|...+..+...|+ +|+.+.+++++.+.+ ++.|... ..|..+ .....+.+.+... +
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 4678999986 8999998888888899 888888888765443 3334321 234431 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 373
>PRK08226 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.21 Score=44.37 Aligned_cols=79 Identities=28% Similarity=0.342 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH---HcCCc---eEeCCCCCCchHHHHHHHHhC--CC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK---AFGVT---EFLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~---~lg~~---~vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
++.++||+|+ |.+|...+..+...|+ +|+.+.++.+..+.++ ..+.. ...|..+ .....+.+.+... +.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4688999985 9999999998888999 8999988875433332 22322 1234431 2233333333322 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 8999998873
No 374
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=94.83 E-value=0.23 Score=43.54 Aligned_cols=79 Identities=24% Similarity=0.302 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCc-eE--eCCCCCCchHHHHHHHHhC--CCcc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVT-EF--LNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~-~v--i~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++.++||.|+ |.+|...+..+...|+ .|+...++.++.+.+ ..++.. .+ .|..+ ...+.+.+.+... +++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSD-RDEVKALGQKAEADLEGVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999986 9999999988888998 888888887776654 334432 12 24331 2233333333222 3799
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
.+|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999874
No 375
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=94.82 E-value=0.24 Score=43.82 Aligned_cols=79 Identities=25% Similarity=0.389 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.+++|.|+ |.+|...+..+...|+ +|+.+.+++++.+.+ ++.+.. . ..|..+ ..++.+.+..... +
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4789999986 8999999988888899 999999987765443 333431 1 224431 2333333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 376
>PLN03075 nicotianamine synthase; Provisional
Probab=94.82 E-value=0.21 Score=45.14 Aligned_cols=97 Identities=16% Similarity=0.147 Sum_probs=63.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHHHcC-----CceEeCCCCCCchHHHHHHHHhCCCccE
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAKAFG-----VTEFLNPNDNNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~~lg-----~~~vi~~~~~~~~~~~~v~~~~~gg~dv 259 (371)
++++|+-+|+|+.++.++.++..+. -.+++.++.+++..+.++++- ...-+... ..+..+. .. ..++||+
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~--~~Da~~~-~~-~l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFH--TADVMDV-TE-SLKEYDV 198 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEE--ECchhhc-cc-ccCCcCE
Confidence 7799999999999999988886553 238999999999888876533 21111111 1111111 00 1248999
Q ss_pred EEEcC-------CChHHHHHHHHHhccCCceEEEe
Q 017460 260 SFECI-------GDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 260 Vid~~-------g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
||-.+ .-...++...+.|++| |.++.=
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 98764 2223678889999997 876654
No 377
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.80 E-value=0.25 Score=45.37 Aligned_cols=87 Identities=22% Similarity=0.299 Sum_probs=54.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|.|.+|...++.++..|+ +|++.+++.++.. +...... ..++.+.+. ..|+|+-+..
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~----~~~l~e~l~-----~aDvvv~~lP 199 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG----REELSAFLS-----QTRVLINLLP 199 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc----cccHHHHHh-----cCCEEEECCC
Confidence 57899999999999999999999999 9999987554321 1111110 112222221 4677777666
Q ss_pred ChHH----H-HHHHHHhccCCceEEEec
Q 017460 266 DTGM----I-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 ~~~~----l-~~~~~~l~~~~G~~v~~g 288 (371)
.+.. + ...+..++++ ..+|.+|
T Consensus 200 lt~~T~~li~~~~l~~mk~g-a~lIN~a 226 (312)
T PRK15469 200 NTPETVGIINQQLLEQLPDG-AYLLNLA 226 (312)
T ss_pred CCHHHHHHhHHHHHhcCCCC-cEEEECC
Confidence 4321 1 2455666765 6666664
No 378
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.78 E-value=0.16 Score=51.22 Aligned_cols=92 Identities=12% Similarity=0.161 Sum_probs=65.4
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEe-CCCCCCchHHHHHHHHhCCCccEEEEcCCC
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi-~~~~~~~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
++|+|.|.|.+|+..++.++..|. .+++++.++++.+.+++.|...++ |.. ++ +.+++.--..+|.++-++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~GDat--~~---~~L~~agi~~A~~vv~~~~d 474 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYGDAT--QL---ELLRAAGAEKAEAIVITCNE 474 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEeeCC--CH---HHHHhcCCccCCEEEEEeCC
Confidence 679999999999999999999999 999999999999999999876555 332 22 22333211278999999987
Q ss_pred hHHHHHH---HHHhccCCceEEE
Q 017460 267 TGMITTA---LQSCCDGWGLAVT 286 (371)
Q Consensus 267 ~~~l~~~---~~~l~~~~G~~v~ 286 (371)
++..... .+...+. -+++.
T Consensus 475 ~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 475 PEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred HHHHHHHHHHHHHHCCC-CeEEE
Confidence 5433222 3344454 45544
No 379
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=94.77 E-value=0.24 Score=42.81 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=30.4
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
..+|+|+|+|++|...+..+...|..+++.++.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 5689999999999999999988999889998876
No 380
>PRK06197 short chain dehydrogenase; Provisional
Probab=94.77 E-value=0.21 Score=45.65 Aligned_cols=78 Identities=21% Similarity=0.268 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc-----CCc-e--EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF-----GVT-E--FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l-----g~~-~--vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.+|||.|+ |++|...+..+...|+ +|+++.++.++.+.+ +++ +.. . .+|..+ .......+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 4688999986 9999999988888899 899998887765432 111 111 1 234431 2333333333332
Q ss_pred -CCccEEEEcCC
Q 017460 255 -GGADYSFECIG 265 (371)
Q Consensus 255 -gg~dvVid~~g 265 (371)
+++|++|.+.|
T Consensus 93 ~~~iD~li~nAg 104 (306)
T PRK06197 93 YPRIDLLINNAG 104 (306)
T ss_pred CCCCCEEEECCc
Confidence 37999999887
No 381
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.75 E-value=0.22 Score=43.59 Aligned_cols=79 Identities=23% Similarity=0.352 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||.|+ |.+|...+..+...|+ +|+++++++++.+.+ +..+... + .|..+ ...+.+.++.... +
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSD-YEEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999986 8999999988888999 999999987765433 2233221 2 23331 2333333443322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (239)
T PRK07666 84 SIDILINNAGI 94 (239)
T ss_pred CccEEEEcCcc
Confidence 78999998864
No 382
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.75 E-value=0.24 Score=44.53 Aligned_cols=80 Identities=19% Similarity=0.380 Sum_probs=50.6
Q ss_pred CCCCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCChh---hHHHH-HHcCCce--EeCCCCCCchHHHHHHHHhC
Q 017460 184 ISKGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNPE---KCEKA-KAFGVTE--FLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 184 ~~~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~~---~~~~~-~~lg~~~--vi~~~~~~~~~~~~v~~~~~ 254 (371)
+-.++++||+|+ +++|.+.+..+...|+ +|+.+.++++ +.+.+ ++++... ..|..+ .+.....+.+...
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~ 84 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTD-EASIDAVFETLEK 84 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCC-HHHHHHHHHHHHH
Confidence 445788999985 5899999888888999 8888876642 33333 3445322 234431 2334444443332
Q ss_pred --CCccEEEEcCC
Q 017460 255 --GGADYSFECIG 265 (371)
Q Consensus 255 --gg~dvVid~~g 265 (371)
+.+|+++.+.|
T Consensus 85 ~~g~iD~lv~nAG 97 (272)
T PRK08159 85 KWGKLDFVVHAIG 97 (272)
T ss_pred hcCCCcEEEECCc
Confidence 37899999876
No 383
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.74 E-value=0.16 Score=47.98 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=31.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
.+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46789999999999999999999999899999876
No 384
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.73 E-value=0.32 Score=43.98 Aligned_cols=67 Identities=21% Similarity=0.364 Sum_probs=49.2
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCCh
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.+.|....... +. +.+ ..+|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~~~-----~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEAST-----DL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccccC-----CH-hHh-----cCCCEEEEcCCHH
Confidence 58899999999988888877898 99999999999888888775211111 11 111 2689999998854
No 385
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=94.72 E-value=0.2 Score=46.52 Aligned_cols=35 Identities=26% Similarity=0.374 Sum_probs=31.0
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
..+|+|+|+|++|..++..+...|..++..++.+.
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 47799999999999999999899998999998763
No 386
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.70 E-value=0.2 Score=44.80 Aligned_cols=78 Identities=14% Similarity=0.270 Sum_probs=48.6
Q ss_pred CCCEEEEEccC---hHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCceE--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGLG---TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTEF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Gag---~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|++ ++|.+.+..+...|+ +|+.+.+++...+.+++ .+.... .|..+ .+++...+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 47889999863 799998888888899 88888776421222322 232122 34442 3334444444333
Q ss_pred CCccEEEEcCC
Q 017460 255 GGADYSFECIG 265 (371)
Q Consensus 255 gg~dvVid~~g 265 (371)
+.+|++|++.|
T Consensus 83 g~iD~linnAg 93 (262)
T PRK07984 83 PKFDGFVHSIG 93 (262)
T ss_pred CCCCEEEECCc
Confidence 36899999887
No 387
>PRK06398 aldose dehydrogenase; Validated
Probab=94.69 E-value=0.13 Score=45.77 Aligned_cols=74 Identities=20% Similarity=0.276 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
+|.++||+|+ +++|.+.+..+...|+ +|+.+.+++.+.. ... ...|..+ .....+.+.+... +.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4689999986 8999999999999999 9999888765432 111 1234441 2334444444332 3699999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98773
No 388
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=94.69 E-value=0.23 Score=44.63 Aligned_cols=78 Identities=32% Similarity=0.397 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||.|+ |++|.+.+..+...|+ +|+++++++++.+.+ ++.+.. . ..|..+ .......+..... +
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999986 8999999999888999 899999887665443 223332 1 234431 2233333333322 3
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999887
No 389
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=94.66 E-value=0.28 Score=43.52 Aligned_cols=78 Identities=19% Similarity=0.271 Sum_probs=50.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-e--EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-E--FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ |++|.+.++.+...|+ +|+++.++ ++.+.+ .+.+.. . .+|..+ .......+.+... +
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFG 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4789999986 8999999999988999 88888777 333222 333432 1 234441 2233333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 390
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=94.64 E-value=0.23 Score=50.89 Aligned_cols=113 Identities=24% Similarity=0.302 Sum_probs=68.1
Q ss_pred eeeEEEeeCCceEECCCCCChhhhhhcchhhhhHHhHhhhhcCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC
Q 017460 141 FSEYTVVHSGCAVKVSSIAPLEKICLLSCGLSAGLGAAWNVADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT 219 (371)
Q Consensus 141 ~a~~~~~~~~~~~~~P~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~ 219 (371)
..+|.-+++.-.+.+ +.++.+++-.-..+ ....-.+.++||+|+ |++|.+.++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 355666666666666 55555555321100 011124789999986 9999999988888899 9999999
Q ss_pred ChhhHHHHH-H----cCCc----eEeCCCCCCchHHHHHHHHhC--CCccEEEEcCCC
Q 017460 220 NPEKCEKAK-A----FGVT----EFLNPNDNNEPVQQVIKRITD--GGADYSFECIGD 266 (371)
Q Consensus 220 ~~~~~~~~~-~----lg~~----~vi~~~~~~~~~~~~v~~~~~--gg~dvVid~~g~ 266 (371)
+.++.+.+. + .+.. ...|..+ ...+.+.+.+... +++|++|.+.|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 887665442 2 2321 1234431 2333344443322 379999998874
No 391
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.64 E-value=0.35 Score=43.85 Aligned_cols=94 Identities=19% Similarity=0.240 Sum_probs=64.6
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHHcCCceEeCCCCCC
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~-~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
.+||.....+..+ +..++ -.|.+|+|+| .+.+|.-.+.++...|+ .|++.. ++.
T Consensus 137 ~~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~--------------------- 193 (296)
T PRK14188 137 LVPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR--------------------- 193 (296)
T ss_pred CcCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC---------------------
Confidence 4555544444433 44443 4699999999 69999999999999999 888884 332
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
+..+.++ ..|+|+-++|.+..+...+ +++| ..++.+|...
T Consensus 194 -~l~e~~~-----~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin~ 233 (296)
T PRK14188 194 -DLPAVCR-----RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGINR 233 (296)
T ss_pred -CHHHHHh-----cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCcc
Confidence 1111111 4799999999877666544 7886 7888888653
No 392
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.64 E-value=0.21 Score=44.93 Aligned_cols=80 Identities=18% Similarity=0.203 Sum_probs=53.7
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCc------eEeCCCCCCchH---HHHHH
Q 017460 185 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVT------EFLNPNDNNEPV---QQVIK 250 (371)
Q Consensus 185 ~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~------~vi~~~~~~~~~---~~~v~ 250 (371)
-.|..+||+|+ .++|.+.+..+...|+ +|+.+.+++++.+..+ ..+.. .+.|... .++. .+...
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAV 83 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHH
Confidence 35788899985 8999999999999999 9999999998865542 22321 2334431 2222 22222
Q ss_pred HHhCCCccEEEEcCCC
Q 017460 251 RITDGGADYSFECIGD 266 (371)
Q Consensus 251 ~~~~gg~dvVid~~g~ 266 (371)
+...|++|+.++..|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 3334589999998774
No 393
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=94.63 E-value=0.35 Score=42.01 Aligned_cols=93 Identities=20% Similarity=0.285 Sum_probs=61.5
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce--EeCCCCCCchHHHHHHHHhC--CCccEE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE--FLNPNDNNEPVQQVIKRITD--GGADYS 260 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~--vi~~~~~~~~~~~~v~~~~~--gg~dvV 260 (371)
-+|.+||=+|+|+ |+++.-+|+ +|+ +|++++.+++..+.++.-.... .+++. ...+.++.. +.||+|
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~------~~~~edl~~~~~~FDvV 128 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYR------QATVEDLASAGGQFDVV 128 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccch------hhhHHHHHhcCCCccEE
Confidence 4688999999753 555555554 578 9999999999888886432221 24553 123333433 389999
Q ss_pred EE-----cCCChH-HHHHHHHHhccCCceEEEe
Q 017460 261 FE-----CIGDTG-MITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 261 id-----~~g~~~-~l~~~~~~l~~~~G~~v~~ 287 (371)
+. -+..++ .++.+.++++|+ |.++..
T Consensus 129 ~cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S 160 (243)
T COG2227 129 TCMEVLEHVPDPESFLRACAKLVKPG-GILFLS 160 (243)
T ss_pred EEhhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence 75 344433 477899999997 887654
No 394
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=94.63 E-value=0.15 Score=40.54 Aligned_cols=34 Identities=35% Similarity=0.529 Sum_probs=28.9
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
..+|+|.|+|++|...+..+-..|+.++..++.+
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999988888899888888753
No 395
>PRK04266 fibrillarin; Provisional
Probab=94.62 E-value=0.71 Score=40.28 Aligned_cols=102 Identities=16% Similarity=0.171 Sum_probs=60.5
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc----CCceEeCCCCCCchHHHHHHHHhCC
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF----GVTEFLNPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l----g~~~vi~~~~~~~~~~~~v~~~~~g 255 (371)
+...+++|++||=.|+|+ |..+..+++..+..+|++++.+++..+.+.+. .-...+..+ ... ......+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D--~~~-~~~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILAD--ARK-PERYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECC--CCC-cchhhhc-cc
Confidence 346889999999998753 44455566665433899999999876654322 111222111 111 0000111 12
Q ss_pred CccEEEEcCCChH----HHHHHHHHhccCCceEEEe
Q 017460 256 GADYSFECIGDTG----MITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 256 g~dvVid~~g~~~----~l~~~~~~l~~~~G~~v~~ 287 (371)
.+|+|+--...+. .++.+.+.|+++ |+++..
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 5999985444321 367888899998 998874
No 396
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=94.61 E-value=0.39 Score=43.70 Aligned_cols=70 Identities=24% Similarity=0.340 Sum_probs=50.4
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChH
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 268 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+....
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~~-----~aDivi~~vp~~~ 67 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-------ETARQVTE-----QADVIFTMVPDSP 67 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-------CCHHHHHh-----cCCEEEEecCCHH
Confidence 37788999999988887778898 99999999999988888776311 11212221 4788888887654
Q ss_pred HHH
Q 017460 269 MIT 271 (371)
Q Consensus 269 ~l~ 271 (371)
.++
T Consensus 68 ~~~ 70 (291)
T TIGR01505 68 QVE 70 (291)
T ss_pred HHH
Confidence 443
No 397
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.60 E-value=0.24 Score=45.25 Aligned_cols=73 Identities=21% Similarity=0.353 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHH---HHHHcCC-c---eEe--CCCCCCchHHHHHHHHhCC
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE---KAKAFGV-T---EFL--NPNDNNEPVQQVIKRITDG 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~---~~~~lg~-~---~vi--~~~~~~~~~~~~v~~~~~g 255 (371)
.+..|+|+|| |-+|...+..+...|+ +|.++.|++++.+ .+++|.. . .++ |..+ ...|.+.+.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d-~~sf~~ai~----- 77 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLD-EGSFDKAID----- 77 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccc-cchHHHHHh-----
Confidence 5688999997 8999999999999999 9999999988643 4666652 1 122 3321 234444432
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
|+|.||.+..
T Consensus 78 gcdgVfH~As 87 (327)
T KOG1502|consen 78 GCDGVFHTAS 87 (327)
T ss_pred CCCEEEEeCc
Confidence 7899988664
No 398
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=94.59 E-value=0.55 Score=36.12 Aligned_cols=87 Identities=16% Similarity=0.267 Sum_probs=59.5
Q ss_pred EEEEEccChHHHHHHHHHHHc--CCCEEE-EEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 189 TVVIFGLGTVGLSVAQGAKAR--GASRII-GVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~--G~~~vi-~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
+|.|+|.|..|.....-++.. +. +++ ++++++++.+.+ +++|.. .+. ++.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~------~~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYT------DLEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EES------SHHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chh------HHHHHHHh---hcCCEEEEec
Confidence 578999999998877555554 45 554 456777776654 678876 332 23333322 2799999999
Q ss_pred CChHHHHHHHHHhccCCceEEEec
Q 017460 265 GDTGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~g 288 (371)
......+.+..++.. |.-+.+.
T Consensus 71 p~~~h~~~~~~~l~~--g~~v~~E 92 (120)
T PF01408_consen 71 PPSSHAEIAKKALEA--GKHVLVE 92 (120)
T ss_dssp SGGGHHHHHHHHHHT--TSEEEEE
T ss_pred CCcchHHHHHHHHHc--CCEEEEE
Confidence 987788888888887 5555553
No 399
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=94.59 E-value=0.27 Score=43.27 Aligned_cols=78 Identities=24% Similarity=0.345 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+ ++.+.. .+ .|..+ ...+.+.+..... +
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITD-RDSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999986 9999999999988999 899998888765544 222322 22 24331 2233333333322 3
Q ss_pred CccEEEEcCC
Q 017460 256 GADYSFECIG 265 (371)
Q Consensus 256 g~dvVid~~g 265 (371)
++|++|.+.|
T Consensus 80 ~~d~vi~~ag 89 (250)
T TIGR03206 80 PVDVLVNNAG 89 (250)
T ss_pred CCCEEEECCC
Confidence 7899999887
No 400
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.57 E-value=0.28 Score=48.13 Aligned_cols=69 Identities=29% Similarity=0.377 Sum_probs=49.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh-----hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEE
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~-----~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvV 260 (371)
.+.+|+|+|+|.+|+.++.+++..|+ +|++++.++. ..+.+++.|+....+.. .. ...++|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~--~~---------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPG--PT---------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCC--cc---------ccCCCCEE
Confidence 46789999999999999999999999 8999886542 23456777876544332 11 01257888
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
+-+.|-
T Consensus 83 v~s~Gi 88 (480)
T PRK01438 83 VTSPGW 88 (480)
T ss_pred EECCCc
Confidence 887775
No 401
>PRK08328 hypothetical protein; Provisional
Probab=94.55 E-value=0.29 Score=42.93 Aligned_cols=35 Identities=31% Similarity=0.481 Sum_probs=30.5
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.+|+|+|+|++|..++..+...|.++++.++.+.
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 56899999999999999999999998898887543
No 402
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.52 E-value=0.18 Score=45.10 Aligned_cols=79 Identities=22% Similarity=0.302 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHcCC-c-eEeCCCCCCchHHHHHHHHhCC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGV-T-EFLNPNDNNEPVQQVIKRITDG--G 256 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~----~~~~~~~lg~-~-~vi~~~~~~~~~~~~v~~~~~g--g 256 (371)
.|+.|||+|+ +++|++.++=...+|+ +++..+.+.+ ..+.+++.|- . .+.|..+ .++.....++.... .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~G~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEVGD 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 5899999986 7999987777777888 8888887765 3444555552 1 2445542 34444443433333 7
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++++.+|-
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999998874
No 403
>PRK12743 oxidoreductase; Provisional
Probab=94.50 E-value=0.31 Score=43.17 Aligned_cols=78 Identities=18% Similarity=0.220 Sum_probs=48.4
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC-ChhhHHH----HHHcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEK----AKAFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~-~~~~~~~----~~~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
++++||+|+ +++|...++.+...|+ +|+.+.+ +.++.+. ++.+|.. .. .|..+ .......+.+... +
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999986 8999999999988999 8877644 4444333 2344542 22 34431 2233333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 404
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=94.50 E-value=0.2 Score=47.62 Aligned_cols=82 Identities=20% Similarity=0.332 Sum_probs=51.5
Q ss_pred cCCCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHH-------HHHHc-CCceE-eCCCCCCchHHHHHHH
Q 017460 182 ADISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE-------KAKAF-GVTEF-LNPNDNNEPVQQVIKR 251 (371)
Q Consensus 182 ~~~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~-------~~~~l-g~~~v-i~~~~~~~~~~~~v~~ 251 (371)
.+...+.+|||+|+ |.+|...+..+...|+ +|++++++..+.. ..... ++..+ .|..+ .+.+...++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~ 132 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFS 132 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHH
Confidence 34566789999986 9999999999888999 9999988775431 11122 33322 24441 2223222222
Q ss_pred HhCCCccEEEEcCCC
Q 017460 252 ITDGGADYSFECIGD 266 (371)
Q Consensus 252 ~~~gg~dvVid~~g~ 266 (371)
. +.++|+||+|.+.
T Consensus 133 ~-~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E-GDPVDVVVSCLAS 146 (390)
T ss_pred h-CCCCcEEEECCcc
Confidence 1 1169999998863
No 405
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=94.49 E-value=0.26 Score=43.44 Aligned_cols=77 Identities=22% Similarity=0.300 Sum_probs=50.5
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eEeCCCCCCchHHHHHHHHh--CCCc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRIT--DGGA 257 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~v~~~~--~gg~ 257 (371)
.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+.. ...|..+ ..++.+.+.... .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999986 9999999988888999 99999998877655532 2321 1234442 233333333332 1368
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+||.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999987753
No 406
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.49 E-value=0.11 Score=46.92 Aligned_cols=94 Identities=19% Similarity=0.211 Sum_probs=58.9
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
..+.++||+|+|++|.+++..+...|+.+|+++.|+.++.+.+ ++++....+... . +..+.+ ..+|+||++
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~--~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD--L-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec--c-cchhcc-----ccCCEEEEC
Confidence 4567899999999999999999999966999999999887665 334321101110 0 000000 268999999
Q ss_pred CCChHH-----HHHHHHHhccCCceEEEe
Q 017460 264 IGDTGM-----ITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 264 ~g~~~~-----l~~~~~~l~~~~G~~v~~ 287 (371)
++.... .......+.+. ..++.+
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Di 220 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDM 220 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEe
Confidence 875310 01123455554 555555
No 407
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.48 E-value=1.1 Score=39.38 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=60.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEc-CChhhHHHH----HHcCCce---EeCCCCCCchH---HHHHHHH-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKCEKA----KAFGVTE---FLNPNDNNEPV---QQVIKRI- 252 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~-~~~~~~~~~----~~lg~~~---vi~~~~~~~~~---~~~v~~~- 252 (371)
.+.++||+|+ +++|.+.++.+...|+ +|+++. ++.++.+.+ ++.+... ..|..+ .... .+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES-LHGVEALYSSLDNEL 80 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCC-HHHHHHHHHHHHHHh
Confidence 4678999985 8999999999989999 787764 444443322 2223221 123321 1122 2222221
Q ss_pred ---hC-CCccEEEEcCCCh----------H---------------HHHHHHHHhccCCceEEEecCCCC
Q 017460 253 ---TD-GGADYSFECIGDT----------G---------------MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 253 ---~~-gg~dvVid~~g~~----------~---------------~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
.+ +++|+++.+.|.. + .++.++..+... |+++.+++...
T Consensus 81 ~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~~ 148 (252)
T PRK12747 81 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAAT 148 (252)
T ss_pred hhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCccc
Confidence 12 2799999988731 0 122345556665 89999887544
No 408
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.48 E-value=0.3 Score=42.61 Aligned_cols=74 Identities=22% Similarity=0.361 Sum_probs=55.0
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH--HcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCC
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK--AFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~--~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
.++|+|+|.+|...++.+...|. .|++++.++++.+... ++....+.-.. .-.+.++++--..+|+++-+++.
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~----t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIGDA----TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEecC----CCHHHHHhcCCCcCCEEEEeeCC
Confidence 57899999999999999999998 9999999999987743 36665443221 22334444422279999999987
Q ss_pred h
Q 017460 267 T 267 (371)
Q Consensus 267 ~ 267 (371)
+
T Consensus 77 d 77 (225)
T COG0569 77 D 77 (225)
T ss_pred C
Confidence 4
No 409
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.48 E-value=0.65 Score=40.86 Aligned_cols=74 Identities=28% Similarity=0.360 Sum_probs=48.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-e--EeCCCCCCchHHHHHHHHhC--CCccE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-E--FLNPNDNNEPVQQVIKRITD--GGADY 259 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg~dv 259 (371)
+++++||+|+ |.+|...+..+...|+ +|++++++. ++..+.. . ..|..+ ...+.+.+.+... +.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999986 8999999998888999 999998876 2222221 1 124431 2233333333322 36899
Q ss_pred EEEcCCC
Q 017460 260 SFECIGD 266 (371)
Q Consensus 260 Vid~~g~ 266 (371)
+|.+.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9998874
No 410
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.29 Score=43.97 Aligned_cols=79 Identities=24% Similarity=0.360 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh-------HH----HHHHcCCce---EeCCCCCCchHHHHHH
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-------CE----KAKAFGVTE---FLNPNDNNEPVQQVIK 250 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~-------~~----~~~~lg~~~---vi~~~~~~~~~~~~v~ 250 (371)
++.++||+|+ |++|...+..+...|+ +|+++.++.++ ++ .++..+... ..|..+ .+...+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4678999986 8999999998888899 89998876542 11 123334321 235442 233333333
Q ss_pred HHhC--CCccEEEEcCCC
Q 017460 251 RITD--GGADYSFECIGD 266 (371)
Q Consensus 251 ~~~~--gg~dvVid~~g~ 266 (371)
+... +.+|++|.+.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 3221 379999998874
No 411
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=94.46 E-value=0.35 Score=41.82 Aligned_cols=101 Identities=20% Similarity=0.188 Sum_probs=60.8
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEe------C--CCCCCchHHHHHHHHh--
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFL------N--PNDNNEPVQQVIKRIT-- 253 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi------~--~~~~~~~~~~~v~~~~-- 253 (371)
.++.+||+.|+|. |.-++.+|. .|. .|++++.++.-.+.+ ++.+..... . ...+-.-+...+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 5678999999874 777777774 699 999999999877764 333321000 0 0000000000011111
Q ss_pred -CCCccEEEEcCCC--------hHHHHHHHHHhccCCceEEEecC
Q 017460 254 -DGGADYSFECIGD--------TGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 254 -~gg~dvVid~~g~--------~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
.+.||.|+|...- ...++...++|+++ |+++.++.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence 1368999996531 23477888999998 98766644
No 412
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.43 E-value=0.48 Score=43.90 Aligned_cols=85 Identities=25% Similarity=0.275 Sum_probs=55.6
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|.|.+|...+..++..|. +|++.+++++......+ . ..++.+.+. ..|+|+-+..
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~~~--------~---~~~l~ell~-----~aDiVil~lP 207 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDFLT--------Y---KDSVKEAIK-----DADIISLHVP 207 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhhhh--------c---cCCHHHHHh-----cCCEEEEeCC
Confidence 56789999999999999999999999 99999887654321100 1 112222221 4788888777
Q ss_pred ChH-----HHHHHHHHhccCCceEEEec
Q 017460 266 DTG-----MITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 ~~~-----~l~~~~~~l~~~~G~~v~~g 288 (371)
... .....+..++++ ..+|..+
T Consensus 208 ~t~~t~~li~~~~l~~mk~g-avlIN~a 234 (330)
T PRK12480 208 ANKESYHLFDKAMFDHVKKG-AILVNAA 234 (330)
T ss_pred CcHHHHHHHhHHHHhcCCCC-cEEEEcC
Confidence 542 123455667775 6666664
No 413
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.43 E-value=0.28 Score=41.83 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=30.1
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
+.+|+|+|+|++|.-.+..+-..|.+++..++.+
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 5789999999999999999999999888888754
No 414
>PLN02928 oxidoreductase family protein
Probab=94.43 E-value=0.4 Score=44.78 Aligned_cols=95 Identities=20% Similarity=0.320 Sum_probs=57.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-----ceEeCCCCCCchHHHHHHHHhCCCccEE
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-----TEFLNPNDNNEPVQQVIKRITDGGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~-----~~vi~~~~~~~~~~~~v~~~~~gg~dvV 260 (371)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++..+.. ...++. ....+......++.+.+. ..|+|
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~ell~-----~aDiV 230 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIYEFAG-----EADIV 230 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCcccCHHHHHh-----hCCEE
Confidence 47899999999999999999999999 9999987633211 111110 001100000122333322 46888
Q ss_pred EEcCCChHH-----HHHHHHHhccCCceEEEec
Q 017460 261 FECIGDTGM-----ITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 261 id~~g~~~~-----l~~~~~~l~~~~G~~v~~g 288 (371)
+-+...+.. -...+..++++ ..+|.++
T Consensus 231 vl~lPlt~~T~~li~~~~l~~Mk~g-a~lINva 262 (347)
T PLN02928 231 VLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIA 262 (347)
T ss_pred EECCCCChHhhcccCHHHHhcCCCC-eEEEECC
Confidence 887763221 24567778886 7777775
No 415
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=94.42 E-value=0.43 Score=42.46 Aligned_cols=97 Identities=19% Similarity=0.230 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhC-CCc
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITD-GGA 257 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~-gg~ 257 (371)
....+.++++||-+|+|. |..+..+++..+..+|++++.++...+.+++.-.. .++.. +. ..+.. ..+
T Consensus 25 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~-----d~----~~~~~~~~f 94 (258)
T PRK01683 25 ARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA-----DI----ASWQPPQAL 94 (258)
T ss_pred hhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC-----ch----hccCCCCCc
Confidence 445667889999998764 56677788776433999999999988888664321 22221 11 11122 379
Q ss_pred cEEEEcCCC------hHHHHHHHHHhccCCceEEEe
Q 017460 258 DYSFECIGD------TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 258 dvVid~~g~------~~~l~~~~~~l~~~~G~~v~~ 287 (371)
|+|+....- ...++.+.+.|+++ |.++..
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~ 129 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ 129 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence 999765431 23578888899997 998775
No 416
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=94.41 E-value=0.27 Score=41.43 Aligned_cols=97 Identities=21% Similarity=0.261 Sum_probs=61.7
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~v~~~~ 253 (371)
....+.++++||=+|+|. |..++.+++.....+|++++.+++..+.+++ ++... ++.. +... ..
T Consensus 25 ~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~-----d~~~----~~ 94 (187)
T PRK08287 25 SKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG-----EAPI----EL 94 (187)
T ss_pred HhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec-----Cchh----hc
Confidence 445667889999888764 6666666766532399999999987776643 44322 2221 1111 11
Q ss_pred CCCccEEEEcCCC---hHHHHHHHHHhccCCceEEEe
Q 017460 254 DGGADYSFECIGD---TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~gg~dvVid~~g~---~~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.+|+|+..... ...++.+.+.|+++ |+++..
T Consensus 95 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~ 130 (187)
T PRK08287 95 PGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLT 130 (187)
T ss_pred CcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEE
Confidence 2379999864321 23567888999997 998764
No 417
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=94.41 E-value=0.028 Score=45.61 Aligned_cols=93 Identities=23% Similarity=0.229 Sum_probs=55.4
Q ss_pred EEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC----CCchHHHHHHHHhCCCccEEEEcCC
Q 017460 190 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND----NNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 190 VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~----~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
|+|+|+|++|...+..++..|. .|..+.+.+ +.+.+++.|....-...+ ........ ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999988888877998 999998888 777777666421111100 00000000 111238999999997
Q ss_pred ChHHHHHHHHHhc----cCCceEEEec
Q 017460 266 DTGMITTALQSCC----DGWGLAVTLG 288 (371)
Q Consensus 266 ~~~~l~~~~~~l~----~~~G~~v~~g 288 (371)
.. .++.++..++ +. ..++.+-
T Consensus 77 a~-~~~~~l~~l~~~~~~~-t~iv~~q 101 (151)
T PF02558_consen 77 AY-QLEQALQSLKPYLDPN-TTIVSLQ 101 (151)
T ss_dssp GG-GHHHHHHHHCTGEETT-EEEEEES
T ss_pred cc-chHHHHHHHhhccCCC-cEEEEEe
Confidence 64 3444555444 43 4566553
No 418
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=94.38 E-value=0.36 Score=42.70 Aligned_cols=79 Identities=16% Similarity=0.268 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ +++|...+..+...|+ +++.++++.++.+.+ ++.+... ..|..+ .+...+.+..... +
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 3789999986 8999999988888999 888888887765443 2233321 235441 2333343333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998873
No 419
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=94.38 E-value=0.28 Score=43.45 Aligned_cols=100 Identities=12% Similarity=0.126 Sum_probs=60.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHc--CCceE-eCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAF--GVTEF-LNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~l--g~~~v-i~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
.+.+|||+|+ |.+|...+..+...|+ +|+++.+++++....... ++..+ .|.. +. .+.+.+....++|+||
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~--d~--~~~l~~~~~~~~d~vi 90 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVT--EG--SDKLVEAIGDDSDAVI 90 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCC--CC--HHHHHHHhhcCCCEEE
Confidence 4678999996 9999999888888898 899988888765433221 23222 2443 11 1223232222799999
Q ss_pred EcCCChH-------------HHHHHHHHhccC-CceEEEecCC
Q 017460 262 ECIGDTG-------------MITTALQSCCDG-WGLAVTLGVP 290 (371)
Q Consensus 262 d~~g~~~-------------~l~~~~~~l~~~-~G~~v~~g~~ 290 (371)
.+.|... ....+++.+... .++++.+++.
T Consensus 91 ~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 91 CATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred ECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 8876421 123344444432 2678887664
No 420
>PRK08303 short chain dehydrogenase; Provisional
Probab=94.37 E-value=0.34 Score=44.43 Aligned_cols=78 Identities=24% Similarity=0.298 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh----------hhHH----HHHHcCCce---EeCCCCCCchHHH
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP----------EKCE----KAKAFGVTE---FLNPNDNNEPVQQ 247 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~----------~~~~----~~~~lg~~~---vi~~~~~~~~~~~ 247 (371)
.+.++||+|+ +++|.+.++.+...|+ +|+++.++. ++.+ .+++.|... ..|..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 4789999986 8999999999988999 899888763 2322 223344321 234431 333444
Q ss_pred HHHHHhC--CCccEEEEcC-C
Q 017460 248 VIKRITD--GGADYSFECI-G 265 (371)
Q Consensus 248 ~v~~~~~--gg~dvVid~~-g 265 (371)
.+.+... +.+|++|.+. |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 4433332 3789999987 5
No 421
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=94.36 E-value=0.16 Score=46.10 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=31.5
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE 222 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~ 222 (371)
++.++||+|+|+.+.+++..+...|+++++++.|+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 5679999999999998777777789989999999853
No 422
>PRK01581 speE spermidine synthase; Validated
Probab=94.36 E-value=0.77 Score=42.80 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=63.2
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCC-c----eEe-CCCC--CCchHHHHHHHHhCC
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGV-T----EFL-NPND--NNEPVQQVIKRITDG 255 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~-~----~vi-~~~~--~~~~~~~~v~~~~~g 255 (371)
.....+|||+|+| .|.++..++++.+..+|++++.+++-.+.++++.. . ..+ +.+- ...+..+.+.. ..+
T Consensus 148 h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 148 VIDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 3445799999966 45567777777666699999999999999886311 0 000 0000 01223333332 233
Q ss_pred CccEEEEcCCC-----------hHHHHHHHHHhccCCceEEEec
Q 017460 256 GADYSFECIGD-----------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 256 g~dvVid~~g~-----------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
.||+||--... .+.++.+.+.|+++ |.++.-.
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs 268 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQS 268 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEec
Confidence 79998654322 12467788899998 9987764
No 423
>PLN02244 tocopherol O-methyltransferase
Probab=94.35 E-value=0.14 Score=47.72 Aligned_cols=94 Identities=20% Similarity=0.304 Sum_probs=61.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eEeCCCCCCchHHHHHHHHhCCCc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~v~~~~~gg~ 257 (371)
+++++||-+|+|. |..+..+++..|+ +|++++.++...+.+++ .|.. .++..+ ..++ .+..+.|
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~~-----~~~~~~F 187 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALNQ-----PFEDGQF 187 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--cccC-----CCCCCCc
Confidence 6789999998864 5567788887788 99999999987776644 2331 111110 0000 1122379
Q ss_pred cEEEEcCCC------hHHHHHHHHHhccCCceEEEec
Q 017460 258 DYSFECIGD------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 258 dvVid~~g~------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
|+|+-.... ...+.++.+.|+++ |+++...
T Consensus 188 D~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~ 223 (340)
T PLN02244 188 DLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVT 223 (340)
T ss_pred cEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEE
Confidence 999864331 23577888999998 9988764
No 424
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.33 E-value=0.13 Score=44.09 Aligned_cols=103 Identities=19% Similarity=0.312 Sum_probs=65.6
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHc--CCCEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhC
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKAR--GASRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~--G~~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~ 254 (371)
..+..+..+||-+|.+ +|..++.+|+.+ +. +|+.++.++++.+.++ +.|...-+... ..+..+.+.++..
T Consensus 40 l~~~~~~k~vLEIGt~-~GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~--~gda~~~l~~l~~ 115 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTF-TGYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVI--EGDALEVLPELAN 115 (205)
T ss_dssp HHHHHT-SEEEEESTT-TSHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEE--ES-HHHHHHHHHH
T ss_pred HHHhcCCceEEEeccc-cccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEE--EeccHhhHHHHHh
Confidence 3445567899999864 478888888877 34 9999999999888774 45543222111 2234455555432
Q ss_pred ----CCccEEE-EcCCCh--HHHHHHHHHhccCCceEEEec
Q 017460 255 ----GGADYSF-ECIGDT--GMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 255 ----gg~dvVi-d~~g~~--~~l~~~~~~l~~~~G~~v~~g 288 (371)
+.||.|| |+--.. ..++.++++++++ |.++.=.
T Consensus 116 ~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 116 DGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp TTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred ccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 2699985 554321 2477888999996 7766543
No 425
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=94.32 E-value=0.29 Score=43.44 Aligned_cols=78 Identities=21% Similarity=0.319 Sum_probs=50.0
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HH----cCC--ceE--eCCCCCCchHHHHHHHHhC--
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA----FGV--TEF--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~----lg~--~~v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
++++||+|+ |.+|...+..+...|+ +|+.++++..+.+.+ .+ .+. ... .|..+ .......+.+...
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATS-EQSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 468999986 8999999988888899 899998887655443 11 221 112 24431 2233333333322
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 378999998873
No 426
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=94.32 E-value=0.33 Score=38.65 Aligned_cols=34 Identities=41% Similarity=0.593 Sum_probs=27.9
Q ss_pred EEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhH
Q 017460 190 VVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKC 224 (371)
Q Consensus 190 VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~ 224 (371)
++|.|+|.++++.+++++.+|+ +|++++..+++.
T Consensus 1 L~I~GaG~va~al~~la~~lg~-~v~v~d~r~e~~ 34 (136)
T PF13478_consen 1 LVIFGAGHVARALARLAALLGF-RVTVVDPRPERF 34 (136)
T ss_dssp EEEES-STCHHHHHHHHHHCTE-EEEEEES-CCC-
T ss_pred CEEEeCcHHHHHHHHHHHhCCC-EEEEEcCCcccc
Confidence 4678999999999999999999 999998887643
No 427
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=94.30 E-value=0.7 Score=41.62 Aligned_cols=88 Identities=20% Similarity=0.311 Sum_probs=62.0
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhh-HHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCCh
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEK-CEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~-~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
+|.++|-|.+|.-.++-+...|+ .|.+.++++++ .+.+++.|+...-+ ..+.+. ..|+||-++++.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa~-----~aDvVitmv~~~ 68 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAAA-----EADVVITMLPDD 68 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHHH-----hCCEEEEecCCH
Confidence 57788999999999999999999 99999999999 88888888753221 122221 478888888776
Q ss_pred HHHHHHH-------HHhccCCceEEEecCC
Q 017460 268 GMITTAL-------QSCCDGWGLAVTLGVP 290 (371)
Q Consensus 268 ~~l~~~~-------~~l~~~~G~~v~~g~~ 290 (371)
..++..+ +.++++ ..+|.++..
T Consensus 69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTi 97 (286)
T COG2084 69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTI 97 (286)
T ss_pred HHHHHHHhCccchhhcCCCC-CEEEECCCC
Confidence 5554444 223454 566666543
No 428
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=94.29 E-value=0.21 Score=43.67 Aligned_cols=69 Identities=17% Similarity=0.312 Sum_probs=50.7
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh--hHHHHHHcCCceEe-CCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 190 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE--KCEKAKAFGVTEFL-NPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 190 VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~--~~~~~~~lg~~~vi-~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
|+|+|+ |.+|...++.+...+. +|.++.|+.. ..+.+++.|+..+. |+. -.+.+.+... |+|.||-+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHc-CCceEEeecC
Confidence 689997 9999999999988888 8999989864 35567888986442 332 2334444433 7999999888
No 429
>PLN02256 arogenate dehydrogenase
Probab=94.28 E-value=0.71 Score=42.25 Aligned_cols=95 Identities=17% Similarity=0.205 Sum_probs=60.4
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccE
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dv 259 (371)
+..+-....+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. . . +..+.+ ....|+
T Consensus 29 ~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~--~----~~~e~~----~~~aDv 95 (304)
T PLN02256 29 EELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F--R----DPDDFC----EEHPDV 95 (304)
T ss_pred HhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e--C----CHHHHh----hCCCCE
Confidence 44444566789999999999988888888887 8999988864 45566677632 1 1 111111 125788
Q ss_pred EEEcCCChHHHHHHHHH-----hccCCceEEEecC
Q 017460 260 SFECIGDTGMITTALQS-----CCDGWGLAVTLGV 289 (371)
Q Consensus 260 Vid~~g~~~~l~~~~~~-----l~~~~G~~v~~g~ 289 (371)
||-|+... .+...++. +.++ ..++.+++
T Consensus 96 Vilavp~~-~~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 96 VLLCTSIL-STEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred EEEecCHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence 88888753 33333333 3444 55666665
No 430
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=94.28 E-value=0.32 Score=40.54 Aligned_cols=33 Identities=27% Similarity=0.276 Sum_probs=28.8
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+|+|+|+|++|...++.+...|..++..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 489999999999999988889998898888765
No 431
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.27 E-value=0.52 Score=38.53 Aligned_cols=84 Identities=14% Similarity=0.168 Sum_probs=55.6
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce------EeCCCC-CCchHHHHHHHHhCCCccEEE
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE------FLNPND-NNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~------vi~~~~-~~~~~~~~v~~~~~gg~dvVi 261 (371)
+|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+... .+..+- -..++.+.+ .+.|+|+
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 58899999999999999999997 9999999998888776533210 000000 011233333 2689999
Q ss_pred EcCCChHHHHHHHHHhcc
Q 017460 262 ECIGDTGMITTALQSCCD 279 (371)
Q Consensus 262 d~~g~~~~l~~~~~~l~~ 279 (371)
-++.+. .++..++.+++
T Consensus 75 iavPs~-~~~~~~~~l~~ 91 (157)
T PF01210_consen 75 IAVPSQ-AHREVLEQLAP 91 (157)
T ss_dssp E-S-GG-GHHHHHHHHTT
T ss_pred ecccHH-HHHHHHHHHhh
Confidence 999874 56777777666
No 432
>PRK08300 acetaldehyde dehydrogenase; Validated
Probab=94.27 E-value=0.56 Score=42.62 Aligned_cols=91 Identities=20% Similarity=0.280 Sum_probs=56.1
Q ss_pred CEEEEEccChHHHH-HHHHHHHcCCCEEEE-EcCChh--hHHHHHHcCCceEeCCCCCCchHHHHHHHHhC-CCccEEEE
Q 017460 188 STVVIFGLGTVGLS-VAQGAKARGASRIIG-VDTNPE--KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD-GGADYSFE 262 (371)
Q Consensus 188 ~~VlI~Gag~~G~~-ai~la~~~G~~~vi~-~~~~~~--~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~-gg~dvVid 262 (371)
-+|.|+|.|.+|.. +..+.+.-+. ++.+ ++.+++ .++.++++|..... .++...+.. .. .++|+||+
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~-~~~~dIDiVf~ 76 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM-PEFDDIDIVFD 76 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC-cCCCCCCEEEE
Confidence 56899999999987 4455554466 5554 445554 34567888864322 123333321 11 26999999
Q ss_pred cCCChHHHHHHHHHhccCCceEEEe
Q 017460 263 CIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 263 ~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
+++...+.+.+.+++..| -.++..
T Consensus 77 AT~a~~H~e~a~~a~eaG-k~VID~ 100 (302)
T PRK08300 77 ATSAGAHVRHAAKLREAG-IRAIDL 100 (302)
T ss_pred CCCHHHHHHHHHHHHHcC-CeEEEC
Confidence 999876666766666664 444444
No 433
>PRK07791 short chain dehydrogenase; Provisional
Probab=94.25 E-value=0.41 Score=43.35 Aligned_cols=80 Identities=23% Similarity=0.288 Sum_probs=50.1
Q ss_pred CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh---------hhHHHH----HHcCCce-E--eCCCCCCchHHH
Q 017460 185 SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP---------EKCEKA----KAFGVTE-F--LNPNDNNEPVQQ 247 (371)
Q Consensus 185 ~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~---------~~~~~~----~~lg~~~-v--i~~~~~~~~~~~ 247 (371)
-++.++||+|+ +++|.+.+..+...|+ +|++++++. ++.+.+ ++.+... . .|..+ .++..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 45789999986 8999998888888999 888876654 333222 2234321 2 24431 233344
Q ss_pred HHHHHhC--CCccEEEEcCCC
Q 017460 248 VIKRITD--GGADYSFECIGD 266 (371)
Q Consensus 248 ~v~~~~~--gg~dvVid~~g~ 266 (371)
.+..... +.+|++|.+.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 4444322 479999998874
No 434
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.22 E-value=0.76 Score=41.29 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=59.5
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eEeCCCC---CCchHHHHHHHHhCCCccE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLNPND---NNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~vi~~~~---~~~~~~~~v~~~~~gg~dv 259 (371)
+.+++||++|+|. |..+..+++.....++.+++.+++-.+.++++-.. ..++... ...+..+.++. ..+.+|+
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~-~~~~yDv 148 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLAD-TENTFDV 148 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHh-CCCCccE
Confidence 4456999998765 44556667766566899999998877777653110 0010000 01122222322 2348999
Q ss_pred EEEcCC----------ChHHHHHHHHHhccCCceEEEec
Q 017460 260 SFECIG----------DTGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 260 Vid~~g----------~~~~l~~~~~~l~~~~G~~v~~g 288 (371)
||--.. ..+.++.+.+.|+++ |.++...
T Consensus 149 Ii~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 149 IIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred EEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 864222 123457788899998 9988763
No 435
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=94.18 E-value=0.2 Score=43.19 Aligned_cols=96 Identities=18% Similarity=0.205 Sum_probs=61.2
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHHh
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~----~lg~~~--vi~~~~~~~~~~~~v~~~~ 253 (371)
...+++++++||-+|+|. |..+..+++.. . +|++++.+++..+.++ +++... ++.. +..+ .+.
T Consensus 72 ~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~-----d~~~---~~~ 140 (212)
T PRK00312 72 ELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG-----DGWK---GWP 140 (212)
T ss_pred HhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC-----Cccc---CCC
Confidence 566788999999998764 44455555553 3 8999999988766653 344432 2211 1101 111
Q ss_pred C-CCccEEEEcCCChHHHHHHHHHhccCCceEEEe
Q 017460 254 D-GGADYSFECIGDTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~-gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
. +.||+|+-........+...+.|+++ |+++..
T Consensus 141 ~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~ 174 (212)
T PRK00312 141 AYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAP 174 (212)
T ss_pred cCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEE
Confidence 1 37999886555445567788899997 998764
No 436
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.18 E-value=0.6 Score=43.25 Aligned_cols=94 Identities=18% Similarity=0.179 Sum_probs=63.2
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceE------eC--CCCCCchHHHHHHHHhCCCcc
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEF------LN--PNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~v------i~--~~~~~~~~~~~v~~~~~gg~d 258 (371)
..+|.|+|+|.+|.+.+..+...|. .|.+.++++++.+.+++.+.... +. ... ..+..+.+ ..+|
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~-~~~~~e~~-----~~aD 76 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYP-TADPEEAL-----AGAD 76 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEE-eCCHHHHH-----cCCC
Confidence 3479999999999999888888898 89999999888777765421100 00 000 11222211 2689
Q ss_pred EEEEcCCChHHHHHHHHHhccCCceEEEecC
Q 017460 259 YSFECIGDTGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 259 vVid~~g~~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
+||-++... .++..++.++++ -.++.+..
T Consensus 77 ~Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 77 FAVVAVPSK-ALRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred EEEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence 999999886 567777888875 56665543
No 437
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.16 E-value=0.15 Score=47.58 Aligned_cols=74 Identities=15% Similarity=0.281 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC----Cce-EeCCCCCCchHHHHHHHHhCC-Cc
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG----VTE-FLNPNDNNEPVQQVIKRITDG-GA 257 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg----~~~-vi~~~~~~~~~~~~v~~~~~g-g~ 257 (371)
+|.+|||+|+ |.+|...+..+...|. +|+++++++...... +.++ ... ..|.. + .+.+.++..+ ++
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~--~---~~~~~~~~~~~~~ 76 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIR--D---AAKLRKAIAEFKP 76 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCC--C---HHHHHHHHhhcCC
Confidence 4688999985 9999999999988998 899988776543222 2222 111 12333 1 2234444444 78
Q ss_pred cEEEEcCC
Q 017460 258 DYSFECIG 265 (371)
Q Consensus 258 dvVid~~g 265 (371)
|+||.+.+
T Consensus 77 d~vih~A~ 84 (349)
T TIGR02622 77 EIVFHLAA 84 (349)
T ss_pred CEEEECCc
Confidence 99999887
No 438
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.14 E-value=0.77 Score=41.67 Aligned_cols=38 Identities=21% Similarity=0.364 Sum_probs=33.2
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHH
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEK 226 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~ 226 (371)
.+|.|+|+|.+|.-.++.+...|. .|+..+++++.++.
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~ 43 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATA 43 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHH
Confidence 378999999999888888777899 99999999998766
No 439
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.12 E-value=0.52 Score=41.92 Aligned_cols=93 Identities=23% Similarity=0.264 Sum_probs=60.4
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc---eEeCCCCCCchHHHHHHHHhCCCc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT---EFLNPNDNNEPVQQVIKRITDGGA 257 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~---~vi~~~~~~~~~~~~v~~~~~gg~ 257 (371)
.++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +..+ +.....+.|
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-----d~~~-l~~~~~~~f 113 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-----AAQD-IAQHLETPV 113 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-----CHHH-HhhhcCCCC
Confidence 4567889888764 6677777764 77 99999999998887754 3321 12221 1211 222233479
Q ss_pred cEEEEcCC-----C-hHHHHHHHHHhccCCceEEEe
Q 017460 258 DYSFECIG-----D-TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 258 dvVid~~g-----~-~~~l~~~~~~l~~~~G~~v~~ 287 (371)
|+|+-... . ...+..+.+.|+++ |.++.+
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~ 148 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM 148 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence 99985321 2 23578889999998 998765
No 440
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=94.11 E-value=0.81 Score=41.79 Aligned_cols=44 Identities=23% Similarity=0.422 Sum_probs=37.4
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 233 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 233 (371)
+|.|+|.|.+|...+.-+...|. +|++.++++++.+.+++.|+.
T Consensus 2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~ 45 (298)
T TIGR00872 2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTT 45 (298)
T ss_pred EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCc
Confidence 58899999999988777777898 999999999999888877653
No 441
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=94.10 E-value=0.71 Score=42.25 Aligned_cols=86 Identities=21% Similarity=0.287 Sum_probs=58.9
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.+|.|+|-|.+|.+.++.++..|. +|++..+.....+.++..|.. +. +..+.++ ..|+|+-+..
T Consensus 15 kgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llLP 80 (335)
T PRK13403 15 QGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLLP 80 (335)
T ss_pred CcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeCC
Confidence 58899999999999999999999999 898886665555666666763 21 2222222 5799998887
Q ss_pred ChHH---H-HHHHHHhccCCceEEEe
Q 017460 266 DTGM---I-TTALQSCCDGWGLAVTL 287 (371)
Q Consensus 266 ~~~~---l-~~~~~~l~~~~G~~v~~ 287 (371)
.+.. + ...+..+++ |.++.+
T Consensus 81 d~~t~~V~~~eil~~MK~--GaiL~f 104 (335)
T PRK13403 81 DEQQAHVYKAEVEENLRE--GQMLLF 104 (335)
T ss_pred ChHHHHHHHHHHHhcCCC--CCEEEE
Confidence 6432 2 234555666 444444
No 442
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=94.09 E-value=0.35 Score=40.63 Aligned_cols=72 Identities=24% Similarity=0.329 Sum_probs=57.6
Q ss_pred CCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEE
Q 017460 183 DISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFE 262 (371)
Q Consensus 183 ~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid 262 (371)
-+++|.+||=+|+|. |.+...|....++ ..+.++.++++...+.+.|.. |+. .+..+.+..+.++.||+||=
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq-----~Dld~gL~~f~d~sFD~VIl 81 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ-----GDLDEGLADFPDQSFDYVIL 81 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE-----CCHHHhHhhCCCCCccEEeh
Confidence 378899999999874 6666677777898 999999999999999999986 553 34556677776669999984
No 443
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=94.08 E-value=0.89 Score=41.81 Aligned_cols=48 Identities=29% Similarity=0.358 Sum_probs=38.6
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT 233 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~ 233 (371)
..|++|.|+|.|.+|...++-++..|. .+....+...+.+...+.++.
T Consensus 160 ~~gK~vgilG~G~IG~~ia~rL~~Fg~-~i~y~~r~~~~~~~~~~~~~~ 207 (336)
T KOG0069|consen 160 LEGKTVGILGLGRIGKAIAKRLKPFGC-VILYHSRTQLPPEEAYEYYAE 207 (336)
T ss_pred ccCCEEEEecCcHHHHHHHHhhhhccc-eeeeecccCCchhhHHHhccc
Confidence 457899999999999999999999995 777777777666666555553
No 444
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=94.08 E-value=0.51 Score=38.65 Aligned_cols=95 Identities=19% Similarity=0.304 Sum_probs=54.8
Q ss_pred hhcchhhhhHHhHhhhhcC-CCCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCC
Q 017460 165 CLLSCGLSAGLGAAWNVAD-ISKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNN 242 (371)
Q Consensus 165 a~~~~~~~~a~~~l~~~~~-~~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~ 242 (371)
..+||.....+..+ +..+ --.|++|+|+|. ..+|.-.+.+++..|+ .|.......+.
T Consensus 14 ~~~PcTp~aii~lL-~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~a-tVt~~h~~T~~------------------- 72 (160)
T PF02882_consen 14 GFVPCTPLAIIELL-EYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGA-TVTICHSKTKN------------------- 72 (160)
T ss_dssp SS--HHHHHHHHHH-HHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT--EEEEE-TTSSS-------------------
T ss_pred CCcCCCHHHHHHHH-HhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCC-eEEeccCCCCc-------------------
Confidence 44454444444433 4444 356899999995 6899999999999999 88887554322
Q ss_pred chHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 243 EPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 243 ~~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
..+.++ .+|+|+.++|.+..+. -+.++++ ..++.+|..
T Consensus 73 --l~~~~~-----~ADIVVsa~G~~~~i~--~~~ik~g-avVIDvG~~ 110 (160)
T PF02882_consen 73 --LQEITR-----RADIVVSAVGKPNLIK--ADWIKPG-AVVIDVGIN 110 (160)
T ss_dssp --HHHHHT-----TSSEEEE-SSSTT-B---GGGS-TT-EEEEE--CE
T ss_pred --ccceee-----eccEEeeeeccccccc--cccccCC-cEEEecCCc
Confidence 222221 4799999999876544 2457886 788888754
No 445
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=94.08 E-value=0.18 Score=44.77 Aligned_cols=73 Identities=16% Similarity=0.119 Sum_probs=52.0
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEEEcCCC
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGD 266 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g~ 266 (371)
+|||+|+.+-|...+..+...|. +|++..+++.+.+.+.+.|...+.... .+- +.+.++... ++|+|||++-.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~---l~~-~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGA---LDP-QELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECC---CCH-HHHHHHHHhcCCCEEEEcCCH
Confidence 68999875559888887778898 999999999888888777655444222 122 224444444 89999998853
No 446
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=94.07 E-value=0.64 Score=41.11 Aligned_cols=102 Identities=19% Similarity=0.256 Sum_probs=65.6
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHH----HcCCceEeCCCCCCchHHHHHHHHhC-
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAK----AFGVTEFLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~----~lg~~~vi~~~~~~~~~~~~v~~~~~- 254 (371)
..+..+..+||-+|.+ +|..++.+|+.++. .+++.++.+++..+.++ +.|...-+... ..+..+.+.++..
T Consensus 74 l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~--~G~a~e~L~~l~~~ 150 (247)
T PLN02589 74 LLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFR--EGPALPVLDQMIED 150 (247)
T ss_pred HHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEE--eccHHHHHHHHHhc
Confidence 4455667789988863 57777788877631 28999999998877764 45643322222 2345555655532
Q ss_pred ----CCccEEEEcCCCh---HHHHHHHHHhccCCceEEE
Q 017460 255 ----GGADYSFECIGDT---GMITTALQSCCDGWGLAVT 286 (371)
Q Consensus 255 ----gg~dvVid~~g~~---~~l~~~~~~l~~~~G~~v~ 286 (371)
+.||.||-=.... ..++.+++++++| |.++.
T Consensus 151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred cccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 4799986433322 2477888999996 77654
No 447
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=94.04 E-value=0.24 Score=44.37 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=65.8
Q ss_pred hhhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc----eEeCCCCCCchHHHHHHHHhC
Q 017460 179 WNVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT----EFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 179 ~~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~----~vi~~~~~~~~~~~~v~~~~~ 254 (371)
....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++.... .+... ++.+ ..+..
T Consensus 45 l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-----D~~~--~~~~~ 115 (263)
T PTZ00098 45 LSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAN-----DILK--KDFPE 115 (263)
T ss_pred HHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEEC-----Cccc--CCCCC
Confidence 3566788999999998764 5556677777788 999999999888888664221 11111 1100 01112
Q ss_pred CCccEEEEc--C---C---ChHHHHHHHHHhccCCceEEEecC
Q 017460 255 GGADYSFEC--I---G---DTGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 255 gg~dvVid~--~---g---~~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
+.||+|+.. . + -...++.+.+.|+++ |+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 379999862 1 1 123577888999998 99987654
No 448
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.04 E-value=0.65 Score=41.80 Aligned_cols=95 Identities=23% Similarity=0.343 Sum_probs=63.9
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+||.....+..+ +..++ -.|.+|+|+|. ..+|.-.+.++...|+ .|+.+.+...
T Consensus 137 ~~PcTp~av~~lL-~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~a-tVt~chs~t~--------------------- 193 (284)
T PRK14190 137 FLPCTPHGILELL-KEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENA-TVTYCHSKTK--------------------- 193 (284)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEEeCCch---------------------
Confidence 4555544444433 44444 46999999995 7899999999999998 8887743221
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
++.+.++ .+|+|+-++|.+..+. -+.++++ ..++.+|...
T Consensus 194 ~l~~~~~-----~ADIvI~AvG~p~~i~--~~~ik~g-avVIDvGi~~ 233 (284)
T PRK14190 194 NLAELTK-----QADILIVAVGKPKLIT--ADMVKEG-AVVIDVGVNR 233 (284)
T ss_pred hHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-CEEEEeeccc
Confidence 2222222 4799999999876443 3557886 8888888654
No 449
>PRK07102 short chain dehydrogenase; Provisional
Probab=94.03 E-value=0.55 Score=41.18 Aligned_cols=76 Identities=18% Similarity=0.262 Sum_probs=48.1
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HH---c-CCc-eE--eCCCCCCchHHHHHHHHhCCCcc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KA---F-GVT-EF--LNPNDNNEPVQQVIKRITDGGAD 258 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~---l-g~~-~v--i~~~~~~~~~~~~v~~~~~gg~d 258 (371)
.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .+ . +.. .+ .|..+ ..+..+.+.+. ...+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~-~~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILD-TASHAAFLDSL-PALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCC-hHHHHHHHHHH-hhcCC
Confidence 47899986 9999999998888899 899999988776543 21 1 111 12 24431 22233333322 12579
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
+++.+.|.
T Consensus 79 ~vv~~ag~ 86 (243)
T PRK07102 79 IVLIAVGT 86 (243)
T ss_pred EEEECCcC
Confidence 99987763
No 450
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=94.03 E-value=0.58 Score=39.99 Aligned_cols=34 Identities=38% Similarity=0.525 Sum_probs=30.4
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
..+|+|.|+|++|...++.+...|..+++.++.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999998888999789998877
No 451
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.01 E-value=0.32 Score=45.62 Aligned_cols=35 Identities=20% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP 221 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~ 221 (371)
+.+|||+|+|++|..++..+...|.+++..++.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 57899999999999999999999998999887654
No 452
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.00 E-value=0.64 Score=36.32 Aligned_cols=95 Identities=20% Similarity=0.346 Sum_probs=50.4
Q ss_pred EEEEEcc-ChHHHHHHHHHHH-cCCCEEEEEcCChh---hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEc
Q 017460 189 TVVIFGL-GTVGLSVAQGAKA-RGASRIIGVDTNPE---KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFEC 263 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~-~G~~~vi~~~~~~~---~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~ 263 (371)
+|+|+|+ |-+|...++.+.. -+.+-+-+++++++ ..+.-.-.|... . .....+.+.++.. .+|++||+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~-~-----~~~v~~~l~~~~~-~~DVvIDf 74 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP-L-----GVPVTDDLEELLE-EADVVIDF 74 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-------SSBEBS-HHHHTT-H-SEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC-c-----ccccchhHHHhcc-cCCEEEEc
Confidence 6889998 9999999999987 57734445555541 111111122110 0 0001112233333 28999999
Q ss_pred CCChHHHHHHHHHhccCCceEEEecCCCC
Q 017460 264 IGDTGMITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 264 ~g~~~~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
+. +..+...++.+... |.-+.+|.++-
T Consensus 75 T~-p~~~~~~~~~~~~~-g~~~ViGTTG~ 101 (124)
T PF01113_consen 75 TN-PDAVYDNLEYALKH-GVPLVIGTTGF 101 (124)
T ss_dssp S--HHHHHHHHHHHHHH-T-EEEEE-SSS
T ss_pred CC-hHHhHHHHHHHHhC-CCCEEEECCCC
Confidence 84 45555556655554 77777776543
No 453
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=94.00 E-value=0.48 Score=41.39 Aligned_cols=79 Identities=23% Similarity=0.357 Sum_probs=48.1
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhh-HHH----HHHcCCc-eEe--CCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEK-CEK----AKAFGVT-EFL--NPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~-~~~----~~~lg~~-~vi--~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|+ |.+|...+..+...|+ +|+++.+++.+ .+. ++..+.. .++ |..+ ...+.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3578999986 9999999999988999 78776665542 221 2223322 122 4441 2233333333322
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|.||.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 268999998864
No 454
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=93.99 E-value=0.33 Score=43.23 Aligned_cols=104 Identities=18% Similarity=0.220 Sum_probs=61.8
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCCh------hhHHHHHHcCC-ce--EeCCCCCCchHHHHHHHHh
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTNP------EKCEKAKAFGV-TE--FLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~~------~~~~~~~~lg~-~~--vi~~~~~~~~~~~~v~~~~ 253 (371)
.++++||+|+ +++|.+.+..+...|+ +|+.+.++. +..+.+++.+. .. ..|..+ .+...+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4688999985 4899999888888999 887764432 22233332221 11 234442 333444444433
Q ss_pred C--CCccEEEEcCCCh-------H----------------------HHHHHHHHhccCCceEEEecCCCC
Q 017460 254 D--GGADYSFECIGDT-------G----------------------MITTALQSCCDGWGLAVTLGVPKL 292 (371)
Q Consensus 254 ~--gg~dvVid~~g~~-------~----------------------~l~~~~~~l~~~~G~~v~~g~~~~ 292 (371)
. +.+|+++.+.|.. . ..+..+..+..+ |+++.+++...
T Consensus 83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~~ 151 (258)
T PRK07370 83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLGG 151 (258)
T ss_pred HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecccc
Confidence 2 3799999988731 0 123455566666 99988876543
No 455
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=93.97 E-value=0.72 Score=42.02 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=50.2
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCCChH
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTG 268 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g~~~ 268 (371)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+.. . .++.+.+ ...|+||.++....
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~------~~~~e~~-----~~~d~vi~~vp~~~ 70 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A------STAKAVA-----EQCDVIITMLPNSP 70 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c------CCHHHHH-----hcCCEEEEeCCCHH
Confidence 68899999999987777777898 8999999999888887777531 1 1122222 14788888887544
Q ss_pred HHHH
Q 017460 269 MITT 272 (371)
Q Consensus 269 ~l~~ 272 (371)
.++.
T Consensus 71 ~~~~ 74 (296)
T PRK11559 71 HVKE 74 (296)
T ss_pred HHHH
Confidence 4443
No 456
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=93.95 E-value=0.27 Score=43.16 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=47.7
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEc-CChhhH-HHH---HHcCCceE---eCCCCCCchHHHHHHHHhC--C
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGVD-TNPEKC-EKA---KAFGVTEF---LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~-~~~~~~-~~~---~~lg~~~v---i~~~~~~~~~~~~v~~~~~--g 255 (371)
+.++||+|+ |++|...++.+...|+ +|++.. +++.+. +.+ ++.+.... .|..+ ..+..+.+.+... +
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 80 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEVG 80 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHhC
Confidence 578899985 9999999999998999 777643 333332 222 33454322 34431 2233333333322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 81 ~id~li~~ag~ 91 (246)
T PRK12938 81 EIDVLVNNAGI 91 (246)
T ss_pred CCCEEEECCCC
Confidence 79999999874
No 457
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=93.94 E-value=1 Score=38.57 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=62.3
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH----cCCc--eEeCCCCCCchHHHHHHHHh-CCCcc
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA----FGVT--EFLNPNDNNEPVQQVIKRIT-DGGAD 258 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~----lg~~--~vi~~~~~~~~~~~~v~~~~-~gg~d 258 (371)
++.+||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+.. .++.. +..+.+.... .+.+|
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~~-----d~~~~l~~~~~~~~~D 113 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLCG-----DAVEVLLDMFPDGSLD 113 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEec-----CHHHHHHHHcCccccc
Confidence 567889899875 6667777776543489999999998887743 3332 22322 2222333223 33789
Q ss_pred EEEEcCCC--------------hHHHHHHHHHhccCCceEEEec
Q 017460 259 YSFECIGD--------------TGMITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 259 vVid~~g~--------------~~~l~~~~~~l~~~~G~~v~~g 288 (371)
.|+-.... ...++.+.+.|+++ |.++...
T Consensus 114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 98754321 24578889999997 9988763
No 458
>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates. This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.
Probab=93.94 E-value=1.3 Score=36.11 Aligned_cols=87 Identities=24% Similarity=0.284 Sum_probs=55.0
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh-hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE-KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~-~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
++++|.|+|-|+-|.+-++-++-.|. +|++..+... ..+.+++-|.. ..+..+.++ ..|+|+-.+
T Consensus 3 ~~k~IAViGyGsQG~a~AlNLrDSG~-~V~Vglr~~s~s~~~A~~~Gf~--------v~~~~eAv~-----~aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGYGSQGHAHALNLRDSGV-NVIVGLREGSASWEKAKADGFE--------VMSVAEAVK-----KADVVMLLL 68 (165)
T ss_dssp CTSEEEEES-SHHHHHHHHHHHHCC--EEEEEE-TTCHHHHHHHHTT-E--------CCEHHHHHH-----C-SEEEE-S
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCC-CEEEEecCCCcCHHHHHHCCCe--------eccHHHHHh-----hCCEEEEeC
Confidence 47899999999999999999999999 8877767665 78888888875 224555554 479999988
Q ss_pred CChH---HH-HHHHHHhccCCceEEEec
Q 017460 265 GDTG---MI-TTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 265 g~~~---~l-~~~~~~l~~~~G~~v~~g 288 (371)
.+.. .+ +.....|++ |..+.+.
T Consensus 69 PD~~q~~vy~~~I~p~l~~--G~~L~fa 94 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKP--GATLVFA 94 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-T--T-EEEES
T ss_pred ChHHHHHHHHHHHHhhCCC--CCEEEeC
Confidence 7642 12 222335666 4555553
No 459
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=93.93 E-value=0.17 Score=42.58 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=55.9
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce--EeCCCCCCchHHHHHHHHhCCCccEE
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE--FLNPNDNNEPVQQVIKRITDGGADYS 260 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~--vi~~~~~~~~~~~~v~~~~~gg~dvV 260 (371)
+++||-+|+|+ |..++.+++.....+|++++.+++..+.+ ++.+.+. ++.. +..+ + ...+.+|+|
T Consensus 43 ~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~-----d~~~-~--~~~~~fD~I 113 (181)
T TIGR00138 43 GKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG-----RAED-F--QHEEQFDVI 113 (181)
T ss_pred CCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec-----chhh-c--cccCCccEE
Confidence 78999898753 45555556554334899999999866555 3455432 2222 1211 1 112389998
Q ss_pred EEcCC--ChHHHHHHHHHhccCCceEEEe
Q 017460 261 FECIG--DTGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 261 id~~g--~~~~l~~~~~~l~~~~G~~v~~ 287 (371)
+-..- -...++.+.+.|+++ |+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 76431 123456778889997 998866
No 460
>PRK07775 short chain dehydrogenase; Provisional
Probab=93.92 E-value=0.5 Score=42.39 Aligned_cols=79 Identities=22% Similarity=0.305 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
+..++||+|+ |.+|...+..+...|+ +|+++.++.++.+.+ +..+... . .|..+ ...+...+.+... +
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3468999986 9999999988888899 898888877655433 2334322 2 24431 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 87 ~id~vi~~Ag~ 97 (274)
T PRK07775 87 EIEVLVSGAGD 97 (274)
T ss_pred CCCEEEECCCc
Confidence 78999998874
No 461
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=93.91 E-value=0.4 Score=45.15 Aligned_cols=34 Identities=24% Similarity=0.453 Sum_probs=30.8
Q ss_pred CCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCC
Q 017460 187 GSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTN 220 (371)
Q Consensus 187 ~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~ 220 (371)
+.+|+|+|+|++|..++..+...|..+++.++.+
T Consensus 41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5689999999999999999999999899988765
No 462
>PRK06523 short chain dehydrogenase; Provisional
Probab=93.90 E-value=0.28 Score=43.52 Aligned_cols=75 Identities=19% Similarity=0.280 Sum_probs=48.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc-eEeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT-EFLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~-~vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
+|.++||.|+ |++|...++.+...|+ +|+++.++.++.. .-... ...|..+ .+...+.+.+... +++|++|
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT-AEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4789999986 8999999998888899 8999988765421 11111 1234431 2233333333322 3789999
Q ss_pred EcCC
Q 017460 262 ECIG 265 (371)
Q Consensus 262 d~~g 265 (371)
.+.|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9887
No 463
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.89 E-value=0.26 Score=48.77 Aligned_cols=71 Identities=23% Similarity=0.312 Sum_probs=48.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.+.++||+|+|++|.+++..+...|+ +|+++.++.++.+.+ .+++.. .+... ++ ........|++++++
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~la~~l~~~-~~~~~----~~----~~~~~~~~diiINtT 447 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKELADAVGGQ-ALTLA----DL----ENFHPEEGMILANTT 447 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCc-eeeHh----Hh----hhhccccCeEEEecc
Confidence 46789999999999999999999999 999999988877665 445432 22211 11 111112578899877
Q ss_pred CC
Q 017460 265 GD 266 (371)
Q Consensus 265 g~ 266 (371)
+-
T Consensus 448 ~v 449 (529)
T PLN02520 448 SV 449 (529)
T ss_pred cC
Confidence 53
No 464
>PRK09135 pteridine reductase; Provisional
Probab=93.83 E-value=0.49 Score=41.48 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHH----HHcC---Cc-eEeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNP-EKCEKA----KAFG---VT-EFLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~-~~~~~~----~~lg---~~-~vi~~~~~~~~~~~~v~~~~~- 254 (371)
.+.++||+|+ |.+|...+..+...|+ +|+.++++. ++.+.+ .+.+ .. ...|..+ .+.+...+.+...
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999986 9999998888888899 899988753 333322 2221 11 1235441 2233333333221
Q ss_pred -CCccEEEEcCC
Q 017460 255 -GGADYSFECIG 265 (371)
Q Consensus 255 -gg~dvVid~~g 265 (371)
+++|+||.+.|
T Consensus 83 ~~~~d~vi~~ag 94 (249)
T PRK09135 83 FGRLDALVNNAS 94 (249)
T ss_pred cCCCCEEEECCC
Confidence 36899999987
No 465
>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase. Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.
Probab=93.82 E-value=0.39 Score=44.28 Aligned_cols=98 Identities=17% Similarity=0.328 Sum_probs=59.7
Q ss_pred EEEEEccChHHHHHHHHHHHcC----CCEEEEEcC--ChhhHHHHHHcCCc--------------eEeCCCC---CCchH
Q 017460 189 TVVIFGLGTVGLSVAQGAKARG----ASRIIGVDT--NPEKCEKAKAFGVT--------------EFLNPND---NNEPV 245 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G----~~~vi~~~~--~~~~~~~~~~lg~~--------------~vi~~~~---~~~~~ 245 (371)
+|.|+|.|.+|+..++.+...+ . .|.++.. +.+.+..+.++... ..++.+. ....-
T Consensus 1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~ 79 (325)
T TIGR01532 1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT 79 (325)
T ss_pred CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence 4789999999999999987654 5 6666533 23333444333210 0111110 00000
Q ss_pred HHHHHHHhCC-CccEEEEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 246 QQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 246 ~~~v~~~~~g-g~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
.+.+. .+. ++|+||+|+|.....+.+...+..| ++.|.++.+
T Consensus 80 p~~~~--w~~~gvDiVie~tG~~~s~e~a~~~l~aG-a~~V~~SaP 122 (325)
T TIGR01532 80 PEALP--WRALGVDLVLDCTGVYGNREQGERHIRAG-AKRVLFSHP 122 (325)
T ss_pred hhhcc--ccccCCCEEEEccchhccHHHHHHHHHcC-CeEEEecCC
Confidence 11111 133 8999999999877778888899986 888888765
No 466
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=93.81 E-value=0.3 Score=42.67 Aligned_cols=101 Identities=20% Similarity=0.289 Sum_probs=63.4
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHH----cCCce--EeCCCCCCchHHHHHHHH
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKA----FGVTE--FLNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~----lg~~~--vi~~~~~~~~~~~~v~~~ 252 (371)
....++++++||-+|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+ ..+ + .+
T Consensus 39 ~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d-----~~~-~-~~ 110 (231)
T TIGR02752 39 KRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGN-----AME-L-PF 110 (231)
T ss_pred HhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEec-----hhc-C-CC
Confidence 455678899999998764 5566777777642 289999999988776643 23221 22111 100 0 11
Q ss_pred hCCCccEEEEcCC-----C-hHHHHHHHHHhccCCceEEEecC
Q 017460 253 TDGGADYSFECIG-----D-TGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 253 ~~gg~dvVid~~g-----~-~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
..+.+|+|+-... . ...++.+.+.|+++ |+++.+..
T Consensus 111 ~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 111 DDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred CCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 2237999875322 1 23467788899998 99987643
No 467
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=93.80 E-value=0.51 Score=41.61 Aligned_cols=77 Identities=21% Similarity=0.293 Sum_probs=49.6
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-eE--eCCCCCCchHHHHHHHHhC--CCc
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF--LNPNDNNEPVQQVIKRITD--GGA 257 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--i~~~~~~~~~~~~v~~~~~--gg~ 257 (371)
.++||.|+ |.+|...++.+...|+ +|+.+.+++++.+.+ ++.+.. .. .|..+ .....+.+.+... +.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD-KDQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcCCC
Confidence 36899986 9999999998889999 899998887654433 333432 12 24431 2333333333322 268
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|++|.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998874
No 468
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.80 E-value=0.7 Score=41.60 Aligned_cols=94 Identities=20% Similarity=0.247 Sum_probs=64.0
Q ss_pred hcchhhhhHHhHhhhhcCCC-CCCEEEEEccC-hHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADIS-KGSTVVIFGLG-TVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~~-~~~~VlI~Gag-~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+||.....+..+ +..++. .|.+|+|+|.| .+|.-.+.++...|+ .|.++.... .
T Consensus 136 ~~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gA-tVtv~hs~t---------------------~ 192 (285)
T PRK14191 136 FVPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGA-SVSVCHILT---------------------K 192 (285)
T ss_pred CCCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-EEEEEeCCc---------------------H
Confidence 4555544444444 545543 69999999975 999999999999999 887773322 1
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
++.+.++ .+|+|+-++|.+..+. -+.++++ ..++.+|..
T Consensus 193 ~l~~~~~-----~ADIvV~AvG~p~~i~--~~~vk~G-avVIDvGi~ 231 (285)
T PRK14191 193 DLSFYTQ-----NADIVCVGVGKPDLIK--ASMVKKG-AVVVDIGIN 231 (285)
T ss_pred HHHHHHH-----hCCEEEEecCCCCcCC--HHHcCCC-cEEEEeecc
Confidence 2222222 4799999999876544 3456886 888888864
No 469
>PRK05650 short chain dehydrogenase; Provisional
Probab=93.79 E-value=0.41 Score=42.78 Aligned_cols=76 Identities=22% Similarity=0.302 Sum_probs=49.0
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--CCcc
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD--GGAD 258 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~--gg~d 258 (371)
++||+|+ |++|...+..+...|+ +|++++++.++.+.+ +..+... + .|..+ ...+.+.+..... +++|
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~id 79 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRD-YSQLTALAQACEEKWGGID 79 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCC
Confidence 6899986 9999998888888899 899998888765543 2333322 2 24431 2223333332222 3799
Q ss_pred EEEEcCCC
Q 017460 259 YSFECIGD 266 (371)
Q Consensus 259 vVid~~g~ 266 (371)
++|.+.|.
T Consensus 80 ~lI~~ag~ 87 (270)
T PRK05650 80 VIVNNAGV 87 (270)
T ss_pred EEEECCCC
Confidence 99998874
No 470
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=93.78 E-value=0.9 Score=36.32 Aligned_cols=95 Identities=18% Similarity=0.158 Sum_probs=61.7
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+++.....+..+ +..++ -.|.+|+|+|. ..+|.-.+.++...|+ .|+.+.++..
T Consensus 7 ~~p~t~~a~~~ll-~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~--------------------- 63 (140)
T cd05212 7 FVSPVAKAVKELL-NKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI--------------------- 63 (140)
T ss_pred ccccHHHHHHHHH-HHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------
Confidence 3443333333333 44343 46899999995 7899999999999999 8888865432
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
++.+.++ .+|+|+-++|....+. -+.+++| -.++.+|...
T Consensus 64 ~l~~~v~-----~ADIVvsAtg~~~~i~--~~~ikpG-a~Vidvg~~~ 103 (140)
T cd05212 64 QLQSKVH-----DADVVVVGSPKPEKVP--TEWIKPG-ATVINCSPTK 103 (140)
T ss_pred CHHHHHh-----hCCEEEEecCCCCccC--HHHcCCC-CEEEEcCCCc
Confidence 1222222 4799999999875444 3458886 7777776543
No 471
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=93.77 E-value=0.2 Score=43.56 Aligned_cols=71 Identities=11% Similarity=0.215 Sum_probs=48.6
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHH-cCCce-EeCCCCCCchHHHHHHHHhCC-CccEEEEcCC
Q 017460 190 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKA-FGVTE-FLNPNDNNEPVQQVIKRITDG-GADYSFECIG 265 (371)
Q Consensus 190 VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~-lg~~~-vi~~~~~~~~~~~~v~~~~~g-g~dvVid~~g 265 (371)
|||+|+ |.+|...+..+...|. .|+++.+++........ ..... ..|.. + .+.+.++..+ .+|.||.+.+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~dl~--~---~~~~~~~~~~~~~d~vi~~a~ 74 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGH-EVIVLSRSSNSESFEEKKLNVEFVIGDLT--D---KEQLEKLLEKANIDVVIHLAA 74 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTT-EEEEEESCSTGGHHHHHHTTEEEEESETT--S---HHHHHHHHHHHTESEEEEEBS
T ss_pred EEEEccCCHHHHHHHHHHHHcCC-ccccccccccccccccccceEEEEEeecc--c---cccccccccccCceEEEEeec
Confidence 789986 9999999999999999 88888777766554432 33322 22443 2 2233344334 7899999987
Q ss_pred C
Q 017460 266 D 266 (371)
Q Consensus 266 ~ 266 (371)
.
T Consensus 75 ~ 75 (236)
T PF01370_consen 75 F 75 (236)
T ss_dssp S
T ss_pred c
Confidence 5
No 472
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=93.77 E-value=0.42 Score=43.59 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=52.9
Q ss_pred EEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCC-CCchHHHHHHHHhCCCccEEEEcCCCh
Q 017460 189 TVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDT 267 (371)
Q Consensus 189 ~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~-~~~~~~~~v~~~~~gg~dvVid~~g~~ 267 (371)
+|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|... -+... ............ ..+|+||-++...
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~d~vila~k~~ 77 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL-EDGEITVPVLAADDPAEL--GPQDLVILAVKAY 77 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc-cCCceeecccCCCChhHc--CCCCEEEEecccc
Confidence 58999999999988888877898 8999999888877776656421 00000 000000001111 3789999998764
Q ss_pred HHHHHHHHHhc
Q 017460 268 GMITTALQSCC 278 (371)
Q Consensus 268 ~~l~~~~~~l~ 278 (371)
.++.+++.++
T Consensus 78 -~~~~~~~~l~ 87 (304)
T PRK06522 78 -QLPAALPSLA 87 (304)
T ss_pred -cHHHHHHHHh
Confidence 3455555444
No 473
>PRK06141 ornithine cyclodeaminase; Validated
Probab=93.72 E-value=1.1 Score=41.38 Aligned_cols=93 Identities=15% Similarity=0.111 Sum_probs=58.7
Q ss_pred CCCCEEEEEccChHHHHHHHHHH-HcCCCEEEEEcCChhhHHHH-HHc---CCceEeCCCCCCchHHHHHHHHhCCCccE
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAK-ARGASRIIGVDTNPEKCEKA-KAF---GVTEFLNPNDNNEPVQQVIKRITDGGADY 259 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~-~~G~~~vi~~~~~~~~~~~~-~~l---g~~~vi~~~~~~~~~~~~v~~~~~gg~dv 259 (371)
....+|+|+|+|..|.+.+..+. ..+..+|.+..+++++.+.+ +++ |..... . .+..+.+ .++|+
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~-~----~~~~~av-----~~aDI 192 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEV-V----TDLEAAV-----RQADI 192 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEE-e----CCHHHHH-----hcCCE
Confidence 45778999999999999876444 46766999999999887665 333 322111 1 1222222 26899
Q ss_pred EEEcCCChHH-HHHHHHHhccCCceEEEecCC
Q 017460 260 SFECIGDTGM-ITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 260 Vid~~g~~~~-l~~~~~~l~~~~G~~v~~g~~ 290 (371)
|+.++++... +. -+.++++ -.+..+|..
T Consensus 193 Vi~aT~s~~pvl~--~~~l~~g-~~i~~ig~~ 221 (314)
T PRK06141 193 ISCATLSTEPLVR--GEWLKPG-THLDLVGNF 221 (314)
T ss_pred EEEeeCCCCCEec--HHHcCCC-CEEEeeCCC
Confidence 9998887532 22 2457774 444455543
No 474
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.70 E-value=0.46 Score=42.37 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=49.3
Q ss_pred CCCEEEEEcc---ChHHHHHHHHHHHcCCCEEEEEcCC---hhhHHHH-HHcCCce--EeCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL---GTVGLSVAQGAKARGASRIIGVDTN---PEKCEKA-KAFGVTE--FLNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga---g~~G~~ai~la~~~G~~~vi~~~~~---~~~~~~~-~~lg~~~--vi~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||+|+ +++|.+.+..+...|+ +|+.+.+. .++.+.+ ++++... ..|..+ .+.....+.....
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4788999983 5899998888888999 88877543 3333333 3445322 234442 3344444444433
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+.+|+++.+.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999998763
No 475
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=93.68 E-value=1.5 Score=37.78 Aligned_cols=113 Identities=12% Similarity=0.048 Sum_probs=66.9
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh-hhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP-EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~-~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
+|.+|||+|+|.+|.-=+.++...|+ +|+++.... .....+.+.+-...++ + .|... .. .++++||-++
T Consensus 11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~-~----~~~~~---~~-~~~~lviaAt 80 (210)
T COG1648 11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE-R----EFDAE---DL-DDAFLVIAAT 80 (210)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh-c----ccChh---hh-cCceEEEEeC
Confidence 47799999999999999999999999 888886655 3333332222111221 1 11110 01 1489999999
Q ss_pred CChHHHHHHHHHhccCCceEEEecCCCCCCeeecchheeeeccEE
Q 017460 265 GDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTL 309 (371)
Q Consensus 265 g~~~~l~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i 309 (371)
++...-+...+...+. +.++..........+-++...-...+++
T Consensus 81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~i 124 (210)
T COG1648 81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQI 124 (210)
T ss_pred CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEE
Confidence 9865545555566664 8887776554433344433332224444
No 476
>PRK06849 hypothetical protein; Provisional
Probab=93.68 E-value=0.73 Score=43.82 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=59.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCc--eEeC-CCCCCchHHHHHHHHhCC-CccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVT--EFLN-PNDNNEPVQQVIKRITDG-GADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~--~vi~-~~~~~~~~~~~v~~~~~g-g~dvV 260 (371)
...+|||+|+ .+.|+..+..++..|. +|++++.++....... ..++ ..+. .+.+.+.+.+.+.++... ++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s-~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFS-RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHH-HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 4578999997 5689999999999999 9999988765433211 1122 2232 222245678888887766 89999
Q ss_pred EEcCCChHHHHHHHHHhcc
Q 017460 261 FECIGDTGMITTALQSCCD 279 (371)
Q Consensus 261 id~~g~~~~l~~~~~~l~~ 279 (371)
|-+......+......+.+
T Consensus 81 IP~~e~~~~~a~~~~~l~~ 99 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSA 99 (389)
T ss_pred EECChHHHhHHhhhhhhcC
Confidence 9877532222233344544
No 477
>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral
Probab=93.67 E-value=0.47 Score=41.12 Aligned_cols=78 Identities=23% Similarity=0.238 Sum_probs=48.3
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh----------hhHHHHHHcCCceEeCCCCCCchHHHHHHHHhC
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP----------EKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITD 254 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~----------~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~ 254 (371)
-.|.+|+|.|.|.+|..+++++...|++.|.+.+.+. +..+..++.+....+... +..-.+++ ..
T Consensus 21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~~~~~~~~~--~~~~~~~l---~~ 95 (217)
T cd05211 21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALGGSARVKVQ--DYFPGEAI---LG 95 (217)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhCCccccCcc--cccCcccc---ee
Confidence 3588999999999999999999999984555566665 555555554432111110 00000111 11
Q ss_pred CCccEEEEcCCCh
Q 017460 255 GGADYSFECIGDT 267 (371)
Q Consensus 255 gg~dvVid~~g~~ 267 (371)
-.+|+++.|...+
T Consensus 96 ~~~DVlipaA~~~ 108 (217)
T cd05211 96 LDVDIFAPCALGN 108 (217)
T ss_pred ccccEEeeccccC
Confidence 2688888888764
No 478
>PRK12746 short chain dehydrogenase; Provisional
Probab=93.67 E-value=1.4 Score=38.80 Aligned_cols=79 Identities=15% Similarity=0.257 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEE-cCChhhHHHH-HHc---CCc-eE--eCCCCCCchHHHHHHHHh---
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKA-KAF---GVT-EF--LNPNDNNEPVQQVIKRIT--- 253 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~-~~~~~~~~~~-~~l---g~~-~v--i~~~~~~~~~~~~v~~~~--- 253 (371)
.+.+++|+|+ |.+|...+..+...|+ +|++. .++.++.+.+ .++ +.. .+ .|.++ .+.+.+.+++..
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHh
Confidence 3578999986 9999999998888898 77664 5666554332 222 321 12 35442 233333333321
Q ss_pred ----C-CCccEEEEcCCC
Q 017460 254 ----D-GGADYSFECIGD 266 (371)
Q Consensus 254 ----~-gg~dvVid~~g~ 266 (371)
+ +++|++|.+.|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 268999998864
No 479
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=93.66 E-value=0.43 Score=44.27 Aligned_cols=99 Identities=22% Similarity=0.167 Sum_probs=62.1
Q ss_pred CCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcC
Q 017460 185 SKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECI 264 (371)
Q Consensus 185 ~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~ 264 (371)
.++.+||-+|+|. |..+..+++..+..++++++.+++-.+.+++.....-+... ..+..+ + .+..+.||+|+.+-
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i--~gD~e~-l-p~~~~sFDvVIs~~ 186 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKII--EGDAED-L-PFPTDYADRYVSAG 186 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEE--eccHHh-C-CCCCCceeEEEEcC
Confidence 4678999998876 66777778776544899999999888877654211000000 111111 0 11123799988643
Q ss_pred C-----C-hHHHHHHHHHhccCCceEEEecC
Q 017460 265 G-----D-TGMITTALQSCCDGWGLAVTLGV 289 (371)
Q Consensus 265 g-----~-~~~l~~~~~~l~~~~G~~v~~g~ 289 (371)
. + ...++++.+.|+++ |+++.++.
T Consensus 187 ~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 187 SIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred hhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 1 1 23578899999998 99887753
No 480
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=93.66 E-value=0.69 Score=44.61 Aligned_cols=100 Identities=11% Similarity=0.138 Sum_probs=60.5
Q ss_pred hhcCCCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCc-eE--eCCCCCCchHHHHHHHH
Q 017460 180 NVADISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVT-EF--LNPNDNNEPVQQVIKRI 252 (371)
Q Consensus 180 ~~~~~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~-~v--i~~~~~~~~~~~~v~~~ 252 (371)
...++++|++||=.|+|+ |..++.+++..+..+|++++.++++.+.+ +.+|.. .+ .+.. .... ...
T Consensus 232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d--~~~~----~~~ 304 (426)
T TIGR00563 232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGD--GRGP----SQW 304 (426)
T ss_pred HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccc--cccc----ccc
Confidence 345678899999887654 33334445544423999999999988766 446664 22 2221 1110 001
Q ss_pred -hCCCccEEEE---cCCC-------------------------hHHHHHHHHHhccCCceEEEe
Q 017460 253 -TDGGADYSFE---CIGD-------------------------TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 253 -~~gg~dvVid---~~g~-------------------------~~~l~~~~~~l~~~~G~~v~~ 287 (371)
..+.||.||- |+|. ...+..+++.|+++ |+++..
T Consensus 305 ~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvys 367 (426)
T TIGR00563 305 AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYA 367 (426)
T ss_pred ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEE
Confidence 1237999863 4442 13567788899998 998754
No 481
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=93.60 E-value=0.48 Score=45.23 Aligned_cols=74 Identities=20% Similarity=0.330 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHcC--Cce-EeCCCCCCchHHHHHHHHhCCCccEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAFG--VTE-FLNPNDNNEPVQQVIKRITDGGADYS 260 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~lg--~~~-vi~~~~~~~~~~~~v~~~~~gg~dvV 260 (371)
++++++|.|+ |++|.+.+..+...|+ +|+++++++++.+.. .+.+ ... ..|.. + .+.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvs--d---~~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVG--Q---EAALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCC--C---HHHHHHHh-CCCCEE
Confidence 3689999986 9999999988888899 999998887665432 2111 111 12433 2 12233332 379999
Q ss_pred EEcCCC
Q 017460 261 FECIGD 266 (371)
Q Consensus 261 id~~g~ 266 (371)
|.+.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 988763
No 482
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.56 E-value=0.69 Score=41.60 Aligned_cols=94 Identities=17% Similarity=0.288 Sum_probs=64.6
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
..||.....+..+ +..++ -.|.+++|+|- ..+|.-.+.+++..|+ .|+++.+...
T Consensus 138 ~~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~a-tVtv~hs~T~--------------------- 194 (285)
T PRK10792 138 LRPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGC-TVTVCHRFTK--------------------- 194 (285)
T ss_pred CCCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCC-eEEEEECCCC---------------------
Confidence 4455544445444 54454 35999999996 5699999999999999 8888754321
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVP 290 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~ 290 (371)
++.+.++ .+|+||.++|.+..+.. +.++++ ..++.+|..
T Consensus 195 ~l~~~~~-----~ADIvi~avG~p~~v~~--~~vk~g-avVIDvGin 233 (285)
T PRK10792 195 NLRHHVR-----NADLLVVAVGKPGFIPG--EWIKPG-AIVIDVGIN 233 (285)
T ss_pred CHHHHHh-----hCCEEEEcCCCcccccH--HHcCCC-cEEEEcccc
Confidence 2222222 58999999998765443 668886 788888854
No 483
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=93.52 E-value=0.69 Score=42.66 Aligned_cols=87 Identities=23% Similarity=0.339 Sum_probs=56.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
.|.++.|+|.|.+|++.++.++..|+ +|+..++++. .+..+.+++..+ ++.+.+. ..|+|.-..+
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell~-----~sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELLA-----ESDIISLHCP 209 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHHH-----hCCEEEEeCC
Confidence 48899999999999999999999999 9999988775 333344443311 1222222 3566654443
Q ss_pred -ChHH----HHHHHHHhccCCceEEEec
Q 017460 266 -DTGM----ITTALQSCCDGWGLAVTLG 288 (371)
Q Consensus 266 -~~~~----l~~~~~~l~~~~G~~v~~g 288 (371)
.+++ -...++.++++ +.+|..+
T Consensus 210 lt~~T~hLin~~~l~~mk~g-a~lVNta 236 (324)
T COG1052 210 LTPETRHLINAEELAKMKPG-AILVNTA 236 (324)
T ss_pred CChHHhhhcCHHHHHhCCCC-eEEEECC
Confidence 2222 13566777776 6766664
No 484
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=93.50 E-value=0.67 Score=41.17 Aligned_cols=78 Identities=24% Similarity=0.331 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcC-ChhhHHHH-H----HcCCc-e--EeCCCCCCchHHHHHHHHhC-
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDT-NPEKCEKA-K----AFGVT-E--FLNPNDNNEPVQQVIKRITD- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~-~~~~~~~~-~----~lg~~-~--vi~~~~~~~~~~~~v~~~~~- 254 (371)
+++++||+|+ +++|.+.+..+...|+ +|+.+.+ ++++.+.+ + +.+.. . .+|..+ .+...+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 4789999986 8999999998888999 7877754 44444332 2 23432 1 235441 2333333333322
Q ss_pred -CCccEEEEcCC
Q 017460 255 -GGADYSFECIG 265 (371)
Q Consensus 255 -gg~dvVid~~g 265 (371)
+.+|+++.+.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 37899999875
No 485
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=93.50 E-value=0.49 Score=43.54 Aligned_cols=78 Identities=24% Similarity=0.280 Sum_probs=50.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHH-HHcCC---c-e--EeCCCCCCchHHHHHHHHh--CC
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKA-KAFGV---T-E--FLNPNDNNEPVQQVIKRIT--DG 255 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~-~~lg~---~-~--vi~~~~~~~~~~~~v~~~~--~g 255 (371)
+.++||.|+ +++|.+.+..+...| + +|+.+.++.++.+.+ ++++. . . ..|..+ .......+.++. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 568999986 899999888888889 7 899998888766544 33331 1 1 135441 223333333332 23
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|++|.+.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999998763
No 486
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.49 E-value=0.63 Score=41.06 Aligned_cols=77 Identities=18% Similarity=0.231 Sum_probs=47.8
Q ss_pred CEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChh-hHH----HHHHcCCc-e--EeCCCCCCchHHHHHHHHhC--CC
Q 017460 188 STVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPE-KCE----KAKAFGVT-E--FLNPNDNNEPVQQVIKRITD--GG 256 (371)
Q Consensus 188 ~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~-~~~----~~~~lg~~-~--vi~~~~~~~~~~~~v~~~~~--gg 256 (371)
.++||.|+ |.+|...+..+...|+ +|++++++.. +.+ .++..+.. . ..|..+ ...+.+.+..... +.
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD-LSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 57899986 9999999998888899 8888876543 221 22233332 1 234441 2333333333332 37
Q ss_pred ccEEEEcCCC
Q 017460 257 ADYSFECIGD 266 (371)
Q Consensus 257 ~dvVid~~g~ 266 (371)
+|++|.+.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999998863
No 487
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=93.49 E-value=1.2 Score=38.32 Aligned_cols=97 Identities=22% Similarity=0.256 Sum_probs=57.3
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCC-CEEEEEcCChhhHHHHHHcCCceEeCCCCCCchHHHHHHHHhCC-CccEEE
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGA-SRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSF 261 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~-~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~g-g~dvVi 261 (371)
++++++||=+|+|+ |..+..+++..|. .+|++++.++.. ..-++ .++..+-.+....+.+...... .+|+|+
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~ 122 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM 122 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence 57888999888764 4455555565542 389999987621 11122 2332211122333444443434 899999
Q ss_pred EcC-----CC------------hHHHHHHHHHhccCCceEEEe
Q 017460 262 ECI-----GD------------TGMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 262 d~~-----g~------------~~~l~~~~~~l~~~~G~~v~~ 287 (371)
... |. ...++.+.+.|+++ |.++..
T Consensus 123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~ 164 (209)
T PRK11188 123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK 164 (209)
T ss_pred cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 643 21 12567888899998 998874
No 488
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=93.44 E-value=0.53 Score=43.35 Aligned_cols=39 Identities=15% Similarity=0.167 Sum_probs=32.0
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHH
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCE 225 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~ 225 (371)
.|.+|||+|+ |.+|...+..+...|+ +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4679999986 9999999988888899 8988877765443
No 489
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=93.43 E-value=0.57 Score=41.00 Aligned_cols=78 Identities=22% Similarity=0.354 Sum_probs=48.8
Q ss_pred CCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEE-cCChhhHHHHH----HcCCc-eE--eCCCCCCchHHHHHHHHhC--C
Q 017460 187 GSTVVIFGL-GTVGLSVAQGAKARGASRIIGV-DTNPEKCEKAK----AFGVT-EF--LNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 187 ~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~-~~~~~~~~~~~----~lg~~-~v--i~~~~~~~~~~~~v~~~~~--g 255 (371)
+.++||+|+ |.+|...+..+...|+ +|+++ .+++++.+.+. ..+.. .+ .|..+ ...+.+.+..... +
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSS-EEDVENLVEQIVEKFG 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 468999986 9999998888777899 88888 88877654432 22321 12 24431 2223333333222 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
++|+||.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 79999998864
No 490
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=93.43 E-value=0.41 Score=37.57 Aligned_cols=86 Identities=27% Similarity=0.388 Sum_probs=52.2
Q ss_pred CEEEEEccChHHHHHHHHHHHcCCCEEEEEc-CChhhHHHHHH-cCCceEeCCCCCCchHHHHHHHHhCCCccEEEEcCC
Q 017460 188 STVVIFGLGTVGLSVAQGAKARGASRIIGVD-TNPEKCEKAKA-FGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIG 265 (371)
Q Consensus 188 ~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~-~~~~~~~~~~~-lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVid~~g 265 (371)
-+|-|+|+|.+|......++..|. .|..+. ++.++.+.+.. ++...+.+.. +.. ..+|++|=++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~-----------~~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLE-----------EIL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TT-----------GGG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCcccccccccccccccccccc-----------ccc-ccCCEEEEEec
Confidence 578899999999999999999998 887774 55556666644 3433333321 111 26899999999
Q ss_pred ChHHHHHHHHHhccC----CceEEEe
Q 017460 266 DTGMITTALQSCCDG----WGLAVTL 287 (371)
Q Consensus 266 ~~~~l~~~~~~l~~~----~G~~v~~ 287 (371)
+. .+....+.|+.. .|+++.-
T Consensus 78 Dd-aI~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 78 DD-AIAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp CC-HHHHHHHHHHCC--S-TT-EEEE
T ss_pred hH-HHHHHHHHHHHhccCCCCcEEEE
Confidence 85 677777777652 1555544
No 491
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=93.41 E-value=0.53 Score=41.37 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEE-EcCChhhHHHH----HHcCCce-E--eCCCCCCchHHHHHHHHhC--
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIG-VDTNPEKCEKA----KAFGVTE-F--LNPNDNNEPVQQVIKRITD-- 254 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~-~~~~~~~~~~~----~~lg~~~-v--i~~~~~~~~~~~~v~~~~~-- 254 (371)
++.++||.|+ |.+|...+..+...|+ +|++ ..++.++.+.+ +..+... . .|..+ ..+....+.+...
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGD-VEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999986 8999999999988999 7665 46666554332 3334321 2 24431 2333333333322
Q ss_pred CCccEEEEcCCC
Q 017460 255 GGADYSFECIGD 266 (371)
Q Consensus 255 gg~dvVid~~g~ 266 (371)
+++|++|.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 368999998873
No 492
>PRK13984 putative oxidoreductase; Provisional
Probab=93.41 E-value=0.47 Score=47.98 Aligned_cols=77 Identities=25% Similarity=0.280 Sum_probs=53.8
Q ss_pred CCCCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCCh---------------------hhHHHHHHcCCceEeCCCCC-
Q 017460 184 ISKGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNP---------------------EKCEKAKAFGVTEFLNPNDN- 241 (371)
Q Consensus 184 ~~~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~---------------------~~~~~~~~lg~~~vi~~~~~- 241 (371)
.+++++|+|+|+|+.|+.++..++..|. +|+++++.+ ...+.++++|++..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4568899999999999999999999999 888886543 12345677887655543210
Q ss_pred CchHHHHHHHHhCCCccEEEEcCCC
Q 017460 242 NEPVQQVIKRITDGGADYSFECIGD 266 (371)
Q Consensus 242 ~~~~~~~v~~~~~gg~dvVid~~g~ 266 (371)
+... +.++ ..+|.||-++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 1221 269999999985
No 493
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.41 E-value=0.65 Score=41.80 Aligned_cols=95 Identities=18% Similarity=0.326 Sum_probs=64.1
Q ss_pred hcchhhhhHHhHhhhhcCC-CCCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCceEeCCCCCCc
Q 017460 166 LLSCGLSAGLGAAWNVADI-SKGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNE 243 (371)
Q Consensus 166 ~~~~~~~~a~~~l~~~~~~-~~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~vi~~~~~~~ 243 (371)
.+||.....+..+ +..++ -.|.+|+|+|. +.+|.-.+.++...|+ .|++......
T Consensus 137 ~~PcTp~avi~lL-~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~ga-tVtv~~s~t~--------------------- 193 (284)
T PRK14179 137 MIPCTPAGIMEMF-REYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNA-TVTLTHSRTR--------------------- 193 (284)
T ss_pred CcCCCHHHHHHHH-HHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCC-EEEEECCCCC---------------------
Confidence 3454444444433 44444 46999999995 9999999999999999 8887732211
Q ss_pred hHHHHHHHHhCCCccEEEEcCCChHHHHHHHHHhccCCceEEEecCCC
Q 017460 244 PVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPK 291 (371)
Q Consensus 244 ~~~~~v~~~~~gg~dvVid~~g~~~~l~~~~~~l~~~~G~~v~~g~~~ 291 (371)
+..+.++ .+|+||-++|.+..+...+ ++++ ..++.+|...
T Consensus 194 ~l~~~~~-----~ADIVI~avg~~~~v~~~~--ik~G-avVIDvgin~ 233 (284)
T PRK14179 194 NLAEVAR-----KADILVVAIGRGHFVTKEF--VKEG-AVVIDVGMNR 233 (284)
T ss_pred CHHHHHh-----hCCEEEEecCccccCCHHH--ccCC-cEEEEeccee
Confidence 1222222 4899999999887666544 8886 7888887653
No 494
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=93.38 E-value=0.61 Score=42.11 Aligned_cols=75 Identities=19% Similarity=0.296 Sum_probs=46.3
Q ss_pred EEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH-HHc----C---Cc-eEe-CCCCCCchHHHHHHHHhCC-Cc
Q 017460 190 VVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA-KAF----G---VT-EFL-NPNDNNEPVQQVIKRITDG-GA 257 (371)
Q Consensus 190 VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~-~~l----g---~~-~vi-~~~~~~~~~~~~v~~~~~g-g~ 257 (371)
|||+|+ |++|...+.-+...+.++++.+++++.++..+ +++ . .. .+. -.- +-.-.+.+...... ++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vig--Dvrd~~~l~~~~~~~~p 78 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIG--DVRDKERLNRIFEEYKP 78 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CT--SCCHHHHHHHHTT--T-
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceee--cccCHHHHHHHHhhcCC
Confidence 799985 99999888888888877999999999988776 334 1 11 100 011 22244566666666 99
Q ss_pred cEEEEcCCC
Q 017460 258 DYSFECIGD 266 (371)
Q Consensus 258 dvVid~~g~ 266 (371)
|+||.+..-
T Consensus 79 diVfHaAA~ 87 (293)
T PF02719_consen 79 DIVFHAAAL 87 (293)
T ss_dssp SEEEE----
T ss_pred CEEEEChhc
Confidence 999997764
No 495
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=93.34 E-value=0.33 Score=43.25 Aligned_cols=76 Identities=18% Similarity=0.283 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhC--CCccEEE
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD--GGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~--gg~dvVi 261 (371)
.+.++||+|+ |++|.+.+..+...|+ +|+.+++++++.+. ..+.. ..|..+ ...+.+.+.+... +.+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 3678999985 9999999999989999 89998887655321 11211 234441 2334444443322 3789999
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 98873
No 496
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=93.33 E-value=0.49 Score=42.72 Aligned_cols=96 Identities=8% Similarity=-0.001 Sum_probs=57.6
Q ss_pred EEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHHHHcCCce-EeCCCCCCchHHHHHHHHhC-CC-ccEEEEcC
Q 017460 189 TVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTE-FLNPNDNNEPVQQVIKRITD-GG-ADYSFECI 264 (371)
Q Consensus 189 ~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~~~lg~~~-vi~~~~~~~~~~~~v~~~~~-gg-~dvVid~~ 264 (371)
+|||+|+ |.+|...+..+...|. +|.+++|++++.. ..+... ..|..+ .+.+...++.... .+ +|.++-+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~-~V~~~~R~~~~~~---~~~~~~~~~d~~d-~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASV-PFLVASRSSSSSA---GPNEKHVKFDWLD-EDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCC-cEEEEeCCCcccc---CCCCccccccCCC-HHHHHHHHhcccCcCCceeEEEEeC
Confidence 4889986 9999999999988998 8999999887542 224332 235541 2233333322111 25 89998776
Q ss_pred CCh----HHHHHHHHHhccC-CceEEEecC
Q 017460 265 GDT----GMITTALQSCCDG-WGLAVTLGV 289 (371)
Q Consensus 265 g~~----~~l~~~~~~l~~~-~G~~v~~g~ 289 (371)
+.. ......++.+... -.++|.++.
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 531 1233445555443 136777654
No 497
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=93.28 E-value=0.65 Score=45.03 Aligned_cols=71 Identities=18% Similarity=0.231 Sum_probs=47.8
Q ss_pred CCCEEEEEccChHHHHHHHHHHHcCCCEEEEEcCChh----hHHHHHHcCCceEeCCCCCCchHHHHHHHHhCCCccEEE
Q 017460 186 KGSTVVIFGLGTVGLSVAQGAKARGASRIIGVDTNPE----KCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSF 261 (371)
Q Consensus 186 ~~~~VlI~Gag~~G~~ai~la~~~G~~~vi~~~~~~~----~~~~~~~lg~~~vi~~~~~~~~~~~~v~~~~~gg~dvVi 261 (371)
.+.+++|+|.|.+|.+++.++...|+ +|++.+.+.. ..+.+++.|........ ..+. ...++|+|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~-------~~~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSH--PLEL-------LDEDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCC--CHHH-------hcCcCCEEE
Confidence 36789999998899999999999999 9999986542 22445666765333221 1111 111488888
Q ss_pred EcCCC
Q 017460 262 ECIGD 266 (371)
Q Consensus 262 d~~g~ 266 (371)
.+.|-
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 87754
No 498
>PRK05855 short chain dehydrogenase; Validated
Probab=93.28 E-value=0.55 Score=46.98 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-ChHHHHHHHHHHHcCCCEEEEEcCChhhHHHH----HHcCCce---EeCCCCCCchHHHHHHHHhC--C
Q 017460 186 KGSTVVIFGL-GTVGLSVAQGAKARGASRIIGVDTNPEKCEKA----KAFGVTE---FLNPNDNNEPVQQVIKRITD--G 255 (371)
Q Consensus 186 ~~~~VlI~Ga-g~~G~~ai~la~~~G~~~vi~~~~~~~~~~~~----~~lg~~~---vi~~~~~~~~~~~~v~~~~~--g 255 (371)
.+.++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+ ++.|... ..|..+ .....+.+.+... +
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4578999986 9999999888888999 899999988776543 3334321 235442 2333333433322 3
Q ss_pred CccEEEEcCCC
Q 017460 256 GADYSFECIGD 266 (371)
Q Consensus 256 g~dvVid~~g~ 266 (371)
.+|++|++.|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 78999999874
No 499
>PRK14903 16S rRNA methyltransferase B; Provisional
Probab=93.27 E-value=1.2 Score=43.00 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=60.6
Q ss_pred hcCCCCCCEEEEEccChHHHHHHHHHHHcC-CCEEEEEcCChhhHHHHH----HcCCce--EeCCCCCCchHHHHHHHHh
Q 017460 181 VADISKGSTVVIFGLGTVGLSVAQGAKARG-ASRIIGVDTNPEKCEKAK----AFGVTE--FLNPNDNNEPVQQVIKRIT 253 (371)
Q Consensus 181 ~~~~~~~~~VlI~Gag~~G~~ai~la~~~G-~~~vi~~~~~~~~~~~~~----~lg~~~--vi~~~~~~~~~~~~v~~~~ 253 (371)
..++++|++||=.|+|+ |..+++++..++ ..+|++++.++.+++.++ .+|... ++..+ ... +....
T Consensus 232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~D--a~~----l~~~~ 304 (431)
T PRK14903 232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIAD--AER----LTEYV 304 (431)
T ss_pred HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEECc--hhh----hhhhh
Confidence 35678899999887654 333445555542 238999999999988774 466643 22211 111 12122
Q ss_pred CCCccEEEE---cCCCh-------------------------HHHHHHHHHhccCCceEEEe
Q 017460 254 DGGADYSFE---CIGDT-------------------------GMITTALQSCCDGWGLAVTL 287 (371)
Q Consensus 254 ~gg~dvVid---~~g~~-------------------------~~l~~~~~~l~~~~G~~v~~ 287 (371)
.+.||.|+- |+|.. ..+..+++.+++| |.++..
T Consensus 305 ~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYs 365 (431)
T PRK14903 305 QDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYS 365 (431)
T ss_pred hccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 347999873 43321 2366788899997 987654
No 500
>PLN03013 cysteine synthase
Probab=93.27 E-value=1.5 Score=42.03 Aligned_cols=56 Identities=32% Similarity=0.341 Sum_probs=42.6
Q ss_pred hhcCCCCCCEEEEEc-cChHHHHHHHHHHHcCCCEEEEEc---CChhhHHHHHHcCCceEe
Q 017460 180 NVADISKGSTVVIFG-LGTVGLSVAQGAKARGASRIIGVD---TNPEKCEKAKAFGVTEFL 236 (371)
Q Consensus 180 ~~~~~~~~~~VlI~G-ag~~G~~ai~la~~~G~~~vi~~~---~~~~~~~~~~~lg~~~vi 236 (371)
+...+.+|...+|.. +|+.|++.+..++.+|+ +++++. .+++|++.++.+|++.+.
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~-~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGY-RLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCC-CEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 455677886666665 69999999999999999 555553 356788888999987543
Done!