Query 017461
Match_columns 371
No_of_seqs 327 out of 2429
Neff 10.4
Searched_HMMs 46136
Date Fri Mar 29 08:46:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017461.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017461hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 7.5E-31 1.6E-35 233.7 25.2 250 100-368 9-258 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 5.4E-31 1.2E-35 231.6 18.9 265 99-365 24-296 (448)
3 TIGR02332 HpaX 4-hydroxyphenyl 100.0 1.2E-29 2.7E-34 236.0 26.7 263 101-366 5-288 (412)
4 PRK14995 methyl viologen resis 100.0 2.1E-29 4.6E-34 239.8 27.5 262 101-367 3-305 (495)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 6.3E-29 1.4E-33 235.3 27.3 269 97-365 12-305 (465)
6 PRK11663 regulatory protein Uh 100.0 3.9E-29 8.4E-34 234.4 23.6 264 101-366 20-288 (434)
7 PRK03545 putative arabinose tr 100.0 8.7E-29 1.9E-33 229.1 25.0 246 101-367 6-251 (390)
8 KOG2532 Permease of the major 100.0 1.9E-28 4.2E-33 227.2 26.6 235 131-365 65-302 (466)
9 TIGR00903 2A0129 major facilit 100.0 1.6E-28 3.5E-33 224.2 24.7 228 117-362 4-231 (368)
10 PRK15403 multidrug efflux syst 100.0 7.3E-28 1.6E-32 224.1 27.7 245 105-364 17-261 (413)
11 PRK10213 nepI ribonucleoside t 100.0 1E-27 2.2E-32 221.8 28.0 247 99-367 15-262 (394)
12 PRK09556 uhpT sugar phosphate 100.0 4.8E-29 1E-33 235.9 18.7 264 101-366 26-303 (467)
13 TIGR00893 2A0114 d-galactonate 100.0 3.6E-28 7.8E-33 224.8 23.2 252 113-366 3-260 (399)
14 PRK10406 alpha-ketoglutarate t 100.0 4.1E-27 8.9E-32 220.7 25.4 246 101-365 19-287 (432)
15 TIGR00710 efflux_Bcr_CflA drug 100.0 6.9E-27 1.5E-31 215.9 25.8 242 109-366 10-251 (385)
16 PLN00028 nitrate transmembrane 100.0 9.1E-27 2E-31 220.5 26.9 257 101-367 33-298 (476)
17 TIGR00711 efflux_EmrB drug res 100.0 5.3E-27 1.2E-31 223.4 24.0 257 105-366 3-300 (485)
18 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-26 3.7E-31 224.9 27.6 186 99-287 162-360 (742)
19 PRK15402 multidrug efflux syst 100.0 1.7E-26 3.7E-31 214.9 25.9 251 99-364 8-258 (406)
20 PRK10091 MFS transport protein 100.0 1.8E-26 3.9E-31 212.9 25.2 241 106-367 5-245 (382)
21 PRK11273 glpT sn-glycerol-3-ph 100.0 1.6E-26 3.5E-31 217.8 24.6 264 101-365 26-297 (452)
22 PF07690 MFS_1: Major Facilita 100.0 2.3E-27 4.9E-32 216.3 18.1 248 110-366 2-252 (352)
23 KOG1330 Sugar transporter/spin 100.0 6.1E-29 1.3E-33 220.7 7.5 246 98-350 27-273 (493)
24 PRK09705 cynX putative cyanate 100.0 1.8E-26 3.9E-31 213.6 23.9 244 101-368 7-251 (393)
25 PRK11551 putative 3-hydroxyphe 100.0 3.4E-26 7.4E-31 213.0 25.4 254 98-367 9-265 (406)
26 TIGR00881 2A0104 phosphoglycer 100.0 2.9E-27 6.3E-32 217.6 17.6 253 112-366 3-261 (379)
27 TIGR00891 2A0112 putative sial 100.0 3.4E-26 7.4E-31 212.6 24.2 266 98-366 6-283 (405)
28 PRK10642 proline/glycine betai 99.9 1.1E-25 2.5E-30 214.1 26.1 255 103-364 15-293 (490)
29 PRK15034 nitrate/nitrite trans 99.9 9.2E-26 2E-30 208.1 24.3 243 87-352 16-283 (462)
30 TIGR00805 oat sodium-independe 99.9 1.5E-26 3.3E-31 224.3 20.2 261 107-367 36-376 (633)
31 TIGR00890 2A0111 Oxalate/Forma 99.9 2.3E-26 5E-31 211.5 20.4 240 111-366 10-249 (377)
32 PRK12307 putative sialic acid 99.9 7.2E-26 1.6E-30 212.1 23.5 259 100-366 14-275 (426)
33 PRK03699 putative transporter; 99.9 1.3E-25 2.8E-30 208.2 24.7 245 101-365 4-249 (394)
34 TIGR00892 2A0113 monocarboxyla 99.9 8.4E-26 1.8E-30 212.8 22.7 267 97-368 12-287 (455)
35 PRK11652 emrD multidrug resist 99.9 4.7E-25 1E-29 204.5 27.3 245 102-364 6-250 (394)
36 PRK10504 putative transporter; 99.9 4.6E-25 1E-29 209.3 27.4 256 105-365 11-305 (471)
37 KOG2533 Permease of the major 99.9 4.2E-26 9.1E-31 212.1 19.1 263 102-366 43-318 (495)
38 TIGR00712 glpT glycerol-3-phos 99.9 1.6E-25 3.4E-30 210.4 22.7 264 102-366 25-296 (438)
39 PRK11102 bicyclomycin/multidru 99.9 2.8E-25 6E-30 204.8 22.7 235 119-367 6-240 (377)
40 PRK10473 multidrug efflux syst 99.9 8.4E-25 1.8E-29 202.7 26.0 242 108-366 7-248 (392)
41 TIGR00886 2A0108 nitrite extru 99.9 4E-25 8.7E-30 202.8 23.0 254 108-366 5-270 (366)
42 PRK10133 L-fucose transporter; 99.9 1.4E-24 3E-29 203.2 26.3 251 102-367 24-305 (438)
43 COG2223 NarK Nitrate/nitrite t 99.9 3.9E-25 8.4E-30 195.1 20.8 250 100-366 10-263 (417)
44 TIGR00900 2A0121 H+ Antiporter 99.9 1.3E-24 2.9E-29 199.0 24.5 247 110-366 5-256 (365)
45 PRK11043 putative transporter; 99.9 2.5E-24 5.4E-29 200.1 26.2 231 113-364 15-245 (401)
46 TIGR00895 2A0115 benzoate tran 99.9 3.5E-25 7.6E-30 205.2 20.0 264 100-366 13-294 (398)
47 PRK15075 citrate-proton sympor 99.9 2.3E-24 5E-29 202.2 24.4 247 102-365 13-282 (434)
48 PRK09952 shikimate transporter 99.9 1E-23 2.3E-28 197.8 27.2 245 101-359 19-288 (438)
49 PRK10077 xylE D-xylose transpo 99.9 4.4E-24 9.5E-29 203.1 21.8 186 100-286 8-219 (479)
50 TIGR00897 2A0118 polyol permea 99.9 1.2E-23 2.7E-28 195.3 24.2 240 112-365 21-265 (402)
51 PRK11195 lysophospholipid tran 99.9 1.7E-23 3.8E-28 193.5 24.3 244 109-367 8-251 (393)
52 TIGR00879 SP MFS transporter, 99.9 2.3E-24 5.1E-29 204.4 18.9 185 100-285 24-220 (481)
53 PRK03893 putative sialic acid 99.9 1.1E-23 2.4E-28 201.2 23.4 168 100-269 16-183 (496)
54 PRK03633 putative MFS family t 99.9 3.1E-23 6.6E-28 191.4 24.6 237 106-366 8-244 (381)
55 TIGR00899 2A0120 sugar efflux 99.9 4E-23 8.7E-28 190.2 24.9 235 112-365 5-243 (375)
56 PRK11646 multidrug resistance 99.9 3E-23 6.4E-28 192.5 24.0 232 113-365 19-251 (400)
57 TIGR00887 2A0109 phosphate:H+ 99.9 4.2E-23 9.2E-28 197.1 24.5 256 98-357 10-323 (502)
58 TIGR00885 fucP L-fucose:H+ sym 99.9 7.8E-23 1.7E-27 189.8 25.5 230 106-350 5-261 (410)
59 PRK10054 putative transporter; 99.9 8.9E-23 1.9E-27 188.9 23.7 238 111-367 14-254 (395)
60 TIGR00896 CynX cyanate transpo 99.9 5.8E-23 1.3E-27 187.8 21.1 225 120-367 16-242 (355)
61 KOG2504 Monocarboxylate transp 99.9 6.6E-23 1.4E-27 192.7 20.2 267 98-368 40-344 (509)
62 PRK05122 major facilitator sup 99.9 1.8E-22 4E-27 187.4 22.5 170 104-273 15-191 (399)
63 PRK10489 enterobactin exporter 99.9 1.2E-22 2.5E-27 189.9 20.9 238 113-366 26-268 (417)
64 PF06609 TRI12: Fungal trichot 99.9 3.7E-22 8.1E-27 188.0 23.3 244 109-357 49-346 (599)
65 PRK12382 putative transporter; 99.9 8.5E-22 1.8E-26 182.6 23.9 164 106-271 17-189 (392)
66 cd06174 MFS The Major Facilita 99.9 9.7E-22 2.1E-26 178.8 22.5 219 108-367 3-221 (352)
67 TIGR00902 2A0127 phenyl propri 99.9 1.3E-21 2.7E-26 180.7 22.9 236 109-365 9-248 (382)
68 PRK09874 drug efflux system pr 99.9 5.6E-21 1.2E-25 178.0 27.1 226 108-351 18-249 (408)
69 TIGR00898 2A0119 cation transp 99.9 2.5E-22 5.4E-27 192.3 18.3 156 125-286 110-268 (505)
70 TIGR00901 2A0125 AmpG-related 99.9 1.5E-21 3.3E-26 178.5 21.9 232 121-367 5-254 (356)
71 PRK11010 ampG muropeptide tran 99.9 5.7E-21 1.2E-25 181.4 24.9 242 108-364 16-265 (491)
72 TIGR00883 2A0106 metabolite-pr 99.9 1.7E-21 3.6E-26 180.2 20.2 237 114-366 3-264 (394)
73 KOG3764 Vesicular amine transp 99.9 7.8E-23 1.7E-27 178.3 9.4 212 136-366 103-315 (464)
74 PRK11128 putative 3-phenylprop 99.9 3.7E-21 8.1E-26 177.6 21.2 232 114-366 14-249 (382)
75 COG0738 FucP Fucose permease [ 99.9 1.5E-20 3.3E-25 165.1 23.2 247 105-366 14-281 (422)
76 PRK15011 sugar efflux transpor 99.9 2.5E-20 5.5E-25 172.7 24.7 231 113-365 24-260 (393)
77 TIGR00806 rfc RFC reduced fola 99.9 2.7E-20 5.8E-25 169.1 23.9 238 108-351 32-292 (511)
78 PRK11902 ampG muropeptide tran 99.9 3.3E-20 7.2E-25 172.4 24.7 242 109-365 4-253 (402)
79 PRK06814 acylglycerophosphoeth 99.9 1.7E-20 3.7E-25 196.0 24.9 249 108-368 19-272 (1140)
80 PRK08633 2-acyl-glycerophospho 99.9 2.7E-20 5.9E-25 195.0 23.9 238 121-367 27-279 (1146)
81 COG2807 CynX Cyanate permease 99.9 6.6E-20 1.4E-24 158.8 21.6 243 103-368 11-254 (395)
82 TIGR00924 yjdL_sub1_fam amino 99.9 6.9E-20 1.5E-24 173.2 21.3 167 108-276 14-187 (475)
83 KOG0254 Predicted transporter 99.9 1.9E-20 4.2E-25 179.0 17.8 251 102-356 43-329 (513)
84 TIGR00882 2A0105 oligosacchari 99.8 1.1E-19 2.4E-24 168.6 21.3 247 108-365 6-262 (396)
85 PRK10207 dipeptide/tripeptide 99.8 2.1E-19 4.5E-24 170.1 22.4 162 105-268 15-181 (489)
86 KOG2615 Permease of the major 99.8 5.9E-20 1.3E-24 159.5 14.9 231 135-368 64-308 (451)
87 KOG0569 Permease of the major 99.8 1.3E-18 2.8E-23 160.2 22.3 262 105-368 12-316 (485)
88 PTZ00207 hypothetical protein; 99.8 3.3E-18 7.1E-23 162.4 24.8 180 99-285 23-209 (591)
89 PRK09528 lacY galactoside perm 99.8 1.4E-18 3E-23 162.5 18.6 242 113-365 19-270 (420)
90 PF05977 MFS_3: Transmembrane 99.8 6.1E-18 1.3E-22 160.0 22.9 249 108-368 14-265 (524)
91 KOG0255 Synaptic vesicle trans 99.8 1.2E-18 2.6E-23 167.4 17.0 151 131-287 110-260 (521)
92 TIGR02718 sider_RhtX_FptX side 99.8 2.3E-17 5E-22 152.8 24.3 243 106-366 3-252 (390)
93 KOG0253 Synaptic vesicle trans 99.8 3.1E-17 6.8E-22 142.0 19.2 188 96-288 70-257 (528)
94 PRK09584 tppB putative tripept 99.8 8.2E-17 1.8E-21 153.2 23.6 164 108-272 25-192 (500)
95 KOG0252 Inorganic phosphate tr 99.8 2.2E-18 4.8E-23 153.3 11.0 263 97-361 34-343 (538)
96 TIGR00792 gph sugar (Glycoside 99.8 1E-17 2.2E-22 157.5 15.8 230 120-362 15-262 (437)
97 KOG3626 Organic anion transpor 99.8 4.4E-17 9.5E-22 154.9 18.4 264 105-368 98-439 (735)
98 TIGR00889 2A0110 nucleoside tr 99.8 1.5E-16 3.2E-21 148.4 21.7 224 111-356 9-242 (418)
99 TIGR01301 GPH_sucrose GPH fami 99.7 6.5E-16 1.4E-20 143.9 23.9 233 117-356 17-294 (477)
100 TIGR00880 2_A_01_02 Multidrug 99.7 6.6E-17 1.4E-21 126.8 11.8 137 145-283 4-140 (141)
101 PRK15462 dipeptide/tripeptide 99.7 5E-16 1.1E-20 145.3 19.1 164 108-272 13-180 (493)
102 PF00083 Sugar_tr: Sugar (and 99.7 3.1E-20 6.8E-25 175.3 -9.4 177 110-287 6-197 (451)
103 TIGR00889 2A0110 nucleoside tr 99.7 1.5E-15 3.2E-20 141.7 18.7 162 125-286 229-407 (418)
104 PF03137 OATP: Organic Anion T 99.7 2.4E-18 5.2E-23 163.2 -0.5 255 114-368 13-352 (539)
105 KOG2325 Predicted transporter/ 99.7 5.5E-15 1.2E-19 135.5 21.3 258 99-364 29-305 (488)
106 KOG2563 Permease of the major 99.7 3.4E-15 7.5E-20 133.2 18.5 259 96-365 37-309 (480)
107 TIGR00890 2A0111 Oxalate/Forma 99.7 1.1E-15 2.3E-20 140.5 15.9 150 124-273 225-374 (377)
108 PRK09528 lacY galactoside perm 99.7 1.1E-15 2.3E-20 143.1 15.3 149 133-283 256-405 (420)
109 PRK05122 major facilitator sup 99.7 8.4E-15 1.8E-19 136.1 21.3 157 123-283 235-391 (399)
110 PRK15011 sugar efflux transpor 99.7 9.6E-15 2.1E-19 135.4 21.0 155 123-280 235-390 (393)
111 TIGR01299 synapt_SV2 synaptic 99.7 7.6E-15 1.6E-19 143.8 20.6 139 143-285 599-737 (742)
112 PRK10642 proline/glycine betai 99.7 2.6E-14 5.7E-19 136.2 23.5 170 118-288 264-436 (490)
113 cd06174 MFS The Major Facilita 99.7 1.1E-14 2.5E-19 132.2 19.3 164 114-279 185-350 (352)
114 PRK12382 putative transporter; 99.6 2.2E-14 4.7E-19 133.0 20.8 155 123-281 235-389 (392)
115 PRK11551 putative 3-hydroxyphe 99.6 1.7E-14 3.6E-19 134.4 18.8 157 122-280 238-395 (406)
116 TIGR00902 2A0127 phenyl propri 99.6 2.4E-14 5.2E-19 132.2 19.4 155 119-277 220-375 (382)
117 PRK09874 drug efflux system pr 99.6 8.2E-15 1.8E-19 136.5 16.4 159 123-283 238-400 (408)
118 PRK09556 uhpT sugar phosphate 99.6 2.3E-14 5E-19 135.9 19.0 171 109-279 263-447 (467)
119 PRK03545 putative arabinose tr 99.6 4.3E-14 9.4E-19 130.9 20.4 152 127-282 229-381 (390)
120 TIGR00899 2A0120 sugar efflux 99.6 5.3E-14 1.2E-18 129.5 20.4 150 127-279 222-372 (375)
121 PRK10489 enterobactin exporter 99.6 4E-14 8.8E-19 132.3 18.7 162 123-286 242-404 (417)
122 TIGR00788 fbt folate/biopterin 99.6 1.2E-14 2.6E-19 137.2 15.2 257 105-367 27-298 (468)
123 PF03825 Nuc_H_symport: Nucleo 99.6 1.7E-13 3.6E-18 126.1 22.0 236 113-365 11-251 (400)
124 TIGR00879 SP MFS transporter, 99.6 3.6E-14 7.9E-19 134.6 18.3 182 104-285 284-474 (481)
125 TIGR00893 2A0114 d-galactonate 99.6 9.3E-14 2E-18 128.3 20.2 165 112-279 223-397 (399)
126 PRK09669 putative symporter Ya 99.6 6.3E-14 1.4E-18 132.0 19.0 211 125-350 31-258 (444)
127 PF05631 DUF791: Protein of un 99.6 5.7E-13 1.2E-17 117.0 23.2 225 105-348 39-272 (354)
128 PRK03893 putative sialic acid 99.6 3.4E-14 7.4E-19 135.9 17.0 150 123-272 294-444 (496)
129 PRK03699 putative transporter; 99.6 9.9E-14 2.1E-18 128.7 18.8 158 119-279 220-378 (394)
130 PRK09705 cynX putative cyanate 99.6 2.8E-13 6.2E-18 125.5 21.4 167 118-287 219-387 (393)
131 PRK03633 putative MFS family t 99.6 2.8E-13 6E-18 125.1 20.9 150 125-279 221-370 (381)
132 KOG4686 Predicted sugar transp 99.6 7.5E-16 1.6E-20 128.9 2.7 257 99-368 39-311 (459)
133 TIGR00891 2A0112 putative sial 99.6 8.2E-14 1.8E-18 129.5 16.6 140 124-265 258-400 (405)
134 TIGR00883 2A0106 metabolite-pr 99.6 4.4E-14 9.6E-19 130.6 14.6 159 113-271 228-391 (394)
135 PRK11273 glpT sn-glycerol-3-ph 99.6 1.2E-13 2.5E-18 130.5 17.7 162 120-281 269-435 (452)
136 PRK11663 regulatory protein Uh 99.6 1.8E-13 3.8E-18 128.6 18.6 168 116-283 255-426 (434)
137 COG2271 UhpC Sugar phosphate p 99.6 6.5E-14 1.4E-18 124.3 13.9 179 104-282 252-435 (448)
138 TIGR00892 2A0113 monocarboxyla 99.6 2.8E-14 6.1E-19 134.7 12.3 159 116-276 253-416 (455)
139 PRK10077 xylE D-xylose transpo 99.5 9.5E-13 2.1E-17 125.4 21.9 167 120-286 287-462 (479)
140 COG2814 AraJ Arabinose efflux 99.5 8.5E-13 1.8E-17 118.5 19.2 172 108-282 216-387 (394)
141 PRK10429 melibiose:sodium symp 99.5 2.9E-13 6.3E-18 128.5 17.1 240 112-362 14-271 (473)
142 TIGR00897 2A0118 polyol permea 99.5 9.1E-13 2E-17 122.6 20.0 163 115-279 233-399 (402)
143 PF01306 LacY_symp: LacY proto 99.5 9.4E-13 2E-17 119.4 18.7 228 113-351 16-250 (412)
144 PRK11128 putative 3-phenylprop 99.5 1.1E-12 2.4E-17 121.2 19.3 147 123-273 224-371 (382)
145 PF13347 MFS_2: MFS/sugar tran 99.5 1.7E-13 3.7E-18 128.5 14.0 219 125-356 23-260 (428)
146 PRK09952 shikimate transporter 99.5 1.7E-12 3.6E-17 122.1 20.0 157 123-279 269-431 (438)
147 PRK12307 putative sialic acid 99.5 1.1E-12 2.4E-17 123.0 18.5 141 123-265 250-392 (426)
148 TIGR00882 2A0105 oligosacchari 99.5 1.4E-12 3E-17 121.1 17.2 142 135-278 250-392 (396)
149 PF05977 MFS_3: Transmembrane 99.5 2.8E-12 6E-17 121.7 19.1 155 122-278 236-391 (524)
150 PF11700 ATG22: Vacuole efflux 99.5 4.6E-12 1E-16 118.9 20.0 173 106-280 283-467 (477)
151 PRK09848 glucuronide transport 99.5 4E-12 8.7E-17 120.0 19.5 235 112-362 16-269 (448)
152 PRK15075 citrate-proton sympor 99.5 6E-12 1.3E-16 118.3 19.8 145 117-261 251-399 (434)
153 TIGR00895 2A0115 benzoate tran 99.5 3.1E-12 6.7E-17 118.5 17.6 138 114-253 260-397 (398)
154 PRK10054 putative transporter; 99.5 2.5E-12 5.4E-17 119.3 16.1 154 132-288 237-391 (395)
155 PRK10504 putative transporter; 99.4 4.4E-12 9.6E-17 120.5 17.9 140 120-259 277-418 (471)
156 PRK11462 putative transporter; 99.4 3.2E-11 7E-16 113.9 23.4 222 117-354 22-261 (460)
157 TIGR00887 2A0109 phosphate:H+ 99.4 4.7E-12 1E-16 121.2 17.8 167 119-286 303-493 (502)
158 PRK11010 ampG muropeptide tran 99.4 1.9E-11 4.1E-16 116.4 21.6 153 127-280 246-402 (491)
159 TIGR00712 glpT glycerol-3-phos 99.4 2.7E-12 5.7E-17 120.8 15.2 164 122-285 269-437 (438)
160 TIGR01272 gluP glucose/galacto 99.4 1.4E-11 3.1E-16 110.0 19.1 157 108-269 144-303 (310)
161 COG3104 PTR2 Dipeptide/tripept 99.4 2.2E-12 4.8E-17 117.4 13.8 174 106-279 23-204 (498)
162 KOG0569 Permease of the major 99.4 1.8E-11 3.9E-16 113.3 20.1 188 100-288 266-461 (485)
163 TIGR00900 2A0121 H+ Antiporter 99.4 4.9E-12 1.1E-16 115.7 16.4 133 125-258 232-365 (365)
164 PRK10213 nepI ribonucleoside t 99.4 2.9E-11 6.3E-16 112.1 20.8 148 127-277 240-387 (394)
165 TIGR00881 2A0104 phosphoglycer 99.4 3.4E-12 7.3E-17 117.3 14.2 143 121-263 233-379 (379)
166 PF06813 Nodulin-like: Nodulin 99.4 7.9E-11 1.7E-15 100.2 20.6 180 102-285 1-185 (250)
167 TIGR02718 sider_RhtX_FptX side 99.4 2.3E-11 5E-16 112.7 18.9 151 126-276 230-386 (390)
168 PRK10091 MFS transport protein 99.4 2.8E-11 6.1E-16 111.8 19.2 152 126-281 222-376 (382)
169 TIGR00792 gph sugar (Glycoside 99.4 1.3E-11 2.8E-16 116.1 16.4 135 124-260 242-384 (437)
170 PF01306 LacY_symp: LacY proto 99.4 3.4E-11 7.3E-16 109.4 18.2 151 135-287 255-406 (412)
171 PRK15402 multidrug efflux syst 99.4 5.7E-11 1.2E-15 110.7 20.3 159 124-283 235-397 (406)
172 TIGR01272 gluP glucose/galacto 99.4 1.4E-11 3E-16 110.1 15.5 160 193-366 9-187 (310)
173 PF11700 ATG22: Vacuole efflux 99.4 2.7E-10 5.9E-15 107.1 24.3 221 140-367 71-327 (477)
174 PRK10406 alpha-ketoglutarate t 99.4 7E-11 1.5E-15 111.0 20.5 158 121-279 260-422 (432)
175 TIGR00898 2A0119 cation transp 99.4 3.2E-11 6.9E-16 115.7 18.5 140 143-285 359-498 (505)
176 PF03825 Nuc_H_symport: Nucleo 99.4 4.5E-11 9.7E-16 110.2 18.5 169 114-284 217-398 (400)
177 PLN00028 nitrate transmembrane 99.4 1.3E-11 2.9E-16 117.1 15.0 151 126-280 274-432 (476)
178 COG2211 MelB Na+/melibiose sym 99.4 4.5E-11 9.7E-16 109.7 17.7 244 110-364 18-279 (467)
179 TIGR02332 HpaX 4-hydroxyphenyl 99.4 4.9E-11 1.1E-15 111.2 18.3 159 109-269 247-409 (412)
180 KOG2504 Monocarboxylate transp 99.3 2.6E-11 5.5E-16 114.7 15.8 175 105-281 299-476 (509)
181 PRK11902 ampG muropeptide tran 99.3 1E-10 2.3E-15 108.8 19.2 148 127-279 233-388 (402)
182 TIGR00896 CynX cyanate transpo 99.3 7E-11 1.5E-15 108.0 17.8 135 121-258 214-350 (355)
183 PRK08633 2-acyl-glycerophospho 99.3 4.3E-11 9.3E-16 126.0 18.5 149 125-275 253-404 (1146)
184 PRK11646 multidrug resistance 99.3 5.6E-11 1.2E-15 110.4 16.8 152 125-278 229-385 (400)
185 COG2223 NarK Nitrate/nitrite t 99.3 2.6E-11 5.6E-16 108.1 12.9 172 109-281 223-401 (417)
186 TIGR00894 2A0114euk Na(+)-depe 99.3 1.1E-10 2.4E-15 110.8 18.2 172 107-281 264-450 (465)
187 KOG4686 Predicted sugar transp 99.3 1.4E-10 3E-15 97.8 16.1 155 105-265 268-426 (459)
188 COG2270 Permeases of the major 99.3 1E-10 2.2E-15 104.4 16.0 169 105-276 255-424 (438)
189 KOG2816 Predicted transporter 99.3 3.4E-11 7.4E-16 112.0 13.5 256 104-366 22-286 (463)
190 PRK09848 glucuronide transport 99.3 6.7E-11 1.4E-15 111.7 15.7 138 122-259 246-391 (448)
191 KOG0253 Synaptic vesicle trans 99.3 3.5E-11 7.6E-16 104.9 12.1 132 149-286 391-524 (528)
192 PRK06814 acylglycerophosphoeth 99.3 7.5E-11 1.6E-15 123.9 17.1 152 123-276 244-417 (1140)
193 PF03209 PUCC: PUCC protein; 99.3 7.1E-10 1.5E-14 99.2 19.5 224 129-364 5-251 (403)
194 PRK10473 multidrug efflux syst 99.3 3E-10 6.5E-15 105.3 17.6 134 130-270 230-363 (392)
195 TIGR00711 efflux_EmrB drug res 99.3 1.1E-10 2.4E-15 111.3 14.9 135 123-257 274-411 (485)
196 KOG3762 Predicted transporter 99.3 4.3E-11 9.3E-16 109.3 10.8 148 130-279 397-545 (618)
197 TIGR00710 efflux_Bcr_CflA drug 99.2 3E-10 6.5E-15 104.8 16.5 140 124-265 226-370 (385)
198 PRK11195 lysophospholipid tran 99.2 7E-10 1.5E-14 102.8 18.7 147 129-279 231-378 (393)
199 PRK10429 melibiose:sodium symp 99.2 4.9E-10 1.1E-14 106.5 17.9 143 117-259 244-396 (473)
200 PRK10133 L-fucose transporter; 99.2 6.7E-10 1.4E-14 104.4 17.6 140 131-275 287-427 (438)
201 PRK15034 nitrate/nitrite trans 99.2 1.2E-09 2.6E-14 101.6 18.5 165 119-284 267-457 (462)
202 PRK14995 methyl viologen resis 99.2 3.8E-10 8.3E-15 107.8 15.6 132 124-255 279-412 (495)
203 PF13347 MFS_2: MFS/sugar tran 99.2 8.8E-10 1.9E-14 103.4 17.2 150 109-259 230-387 (428)
204 TIGR00903 2A0129 major facilit 99.2 1.1E-09 2.3E-14 100.4 17.3 158 113-278 201-362 (368)
205 TIGR00901 2A0125 AmpG-related 99.2 5.8E-10 1.3E-14 102.0 14.8 121 120-240 225-355 (356)
206 TIGR00924 yjdL_sub1_fam amino 99.2 2.8E-09 6E-14 101.2 19.4 174 107-282 275-469 (475)
207 PF07690 MFS_1: Major Facilita 99.2 5.7E-10 1.2E-14 101.5 13.8 129 119-247 221-352 (352)
208 PRK11043 putative transporter; 99.2 2.8E-09 6.1E-14 99.2 18.4 137 124-261 223-362 (401)
209 COG0477 ProP Permeases of the 99.2 3.1E-09 6.7E-14 94.2 17.8 159 115-273 13-177 (338)
210 COG2807 CynX Cyanate permease 99.1 5.2E-09 1.1E-13 91.7 17.5 177 100-283 208-387 (395)
211 PRK11102 bicyclomycin/multidru 99.1 3.4E-09 7.3E-14 97.7 17.1 123 129-252 220-345 (377)
212 PRK09669 putative symporter Ya 99.1 2.3E-09 5E-14 101.1 16.0 136 124-259 249-391 (444)
213 COG2270 Permeases of the major 99.1 9E-09 2E-13 92.2 16.7 223 138-368 57-299 (438)
214 TIGR00885 fucP L-fucose:H+ sym 99.0 1.4E-08 3.1E-13 94.5 17.4 141 123-268 251-399 (410)
215 TIGR00926 2A1704 Peptide:H+ sy 99.0 4.4E-08 9.6E-13 95.4 21.0 158 123-280 7-181 (654)
216 PF03092 BT1: BT1 family; Int 99.0 1.9E-09 4.2E-14 100.7 10.2 159 124-283 10-177 (433)
217 TIGR00788 fbt folate/biopterin 99.0 8.1E-09 1.8E-13 97.8 14.3 126 131-258 280-415 (468)
218 KOG2532 Permease of the major 99.0 1.5E-08 3.2E-13 94.9 14.8 180 105-286 259-452 (466)
219 PRK11652 emrD multidrug resist 99.0 3.6E-08 7.8E-13 91.5 17.1 128 129-257 233-361 (394)
220 PRK09584 tppB putative tripept 98.9 3.5E-08 7.7E-13 94.2 16.6 139 141-279 318-477 (500)
221 PRK11462 putative transporter; 98.9 7.5E-08 1.6E-12 91.1 18.4 137 123-259 247-390 (460)
222 TIGR00769 AAA ADP/ATP carrier 98.9 1.1E-06 2.4E-11 82.1 25.7 240 105-352 8-295 (472)
223 KOG3764 Vesicular amine transp 98.9 2.3E-09 4.9E-14 94.8 7.2 163 116-280 282-453 (464)
224 PF01770 Folate_carrier: Reduc 98.9 6.4E-07 1.4E-11 81.4 22.7 224 124-351 24-277 (412)
225 COG2211 MelB Na+/melibiose sym 98.9 1E-07 2.2E-12 87.9 17.4 151 109-259 241-399 (467)
226 COG0738 FucP Fucose permease [ 98.9 8E-08 1.7E-12 85.6 15.0 164 106-274 238-402 (422)
227 PRK10207 dipeptide/tripeptide 98.8 2.3E-07 4.9E-12 88.4 18.1 140 141-280 311-475 (489)
228 PF00083 Sugar_tr: Sugar (and 98.8 1.4E-11 3E-16 116.5 -10.6 165 121-287 270-442 (451)
229 KOG0252 Inorganic phosphate tr 98.8 7.6E-09 1.6E-13 93.2 6.6 184 104-288 304-504 (538)
230 KOG0637 Sucrose transporter an 98.8 2.8E-08 6.1E-13 89.6 10.1 131 123-253 51-202 (498)
231 TIGR00886 2A0108 nitrite extru 98.8 3.2E-08 7E-13 90.7 10.8 119 123-242 244-365 (366)
232 PF05978 UNC-93: Ion channel r 98.8 7.2E-07 1.6E-11 70.3 15.5 109 143-254 41-149 (156)
233 PF03209 PUCC: PUCC protein; 98.8 6.1E-07 1.3E-11 80.7 16.9 151 128-278 233-395 (403)
234 KOG0254 Predicted transporter 98.7 7.5E-07 1.6E-11 85.6 18.1 181 106-287 297-489 (513)
235 PRK15403 multidrug efflux syst 98.7 1E-06 2.2E-11 82.4 18.4 154 121-277 235-393 (413)
236 PF06779 DUF1228: Protein of u 98.7 1E-07 2.2E-12 66.1 7.8 80 116-197 4-83 (85)
237 TIGR01301 GPH_sucrose GPH fami 98.6 1.1E-06 2.4E-11 82.6 15.4 145 142-286 308-476 (477)
238 PF06609 TRI12: Fungal trichot 98.6 3.1E-06 6.7E-11 81.0 17.2 147 105-251 311-462 (599)
239 PRK15462 dipeptide/tripeptide 98.5 1.9E-05 4.1E-10 74.7 18.5 141 140-280 309-477 (493)
240 KOG2533 Permease of the major 98.4 1.4E-06 3E-11 82.1 10.5 161 106-268 275-443 (495)
241 PF12832 MFS_1_like: MFS_1 lik 98.4 1.8E-06 4E-11 59.4 8.4 69 111-179 7-75 (77)
242 PF03219 TLC: TLC ATP/ADP tran 98.4 0.00013 2.8E-09 68.7 22.9 250 97-351 17-310 (491)
243 KOG0255 Synaptic vesicle trans 98.4 3.3E-05 7.2E-10 74.5 18.6 141 149-290 360-501 (521)
244 PTZ00207 hypothetical protein; 98.4 7.1E-06 1.5E-10 78.9 13.1 173 106-281 355-552 (591)
245 KOG2615 Permease of the major 98.3 1.5E-05 3.3E-10 70.7 13.1 141 113-255 270-413 (451)
246 KOG2816 Predicted transporter 98.3 1.4E-05 2.9E-10 74.9 12.4 126 127-255 265-391 (463)
247 PF02487 CLN3: CLN3 protein; 98.2 0.00021 4.6E-09 65.1 18.3 135 142-284 62-198 (402)
248 COG3202 ATP/ADP translocase [E 98.2 0.0015 3.2E-08 60.4 23.6 242 96-344 19-305 (509)
249 PF06963 FPN1: Ferroportin1 (F 98.2 0.00026 5.7E-09 65.6 18.6 255 108-364 6-300 (432)
250 PF00854 PTR2: POT family; In 98.1 2.5E-05 5.5E-10 71.9 11.5 110 170-279 2-121 (372)
251 KOG3098 Uncharacterized conser 98.0 0.00014 3E-09 67.5 13.7 110 141-253 51-161 (461)
252 KOG3574 Acetyl-CoA transporter 98.0 0.00053 1.2E-08 61.1 16.2 243 106-363 33-306 (510)
253 COG3104 PTR2 Dipeptide/tripept 98.0 0.00028 6.1E-09 65.3 15.1 141 140-280 325-486 (498)
254 KOG1237 H+/oligopeptide sympor 97.9 0.00031 6.8E-09 67.6 15.2 156 123-278 57-242 (571)
255 PF02487 CLN3: CLN3 protein; 97.9 0.0003 6.6E-09 64.2 13.6 115 134-254 276-395 (402)
256 KOG4332 Predicted sugar transp 97.9 0.00012 2.7E-09 61.9 9.8 132 123-259 56-196 (454)
257 PRK03612 spermidine synthase; 97.8 0.0027 5.8E-08 60.9 19.0 144 130-275 41-191 (521)
258 KOG2563 Permease of the major 97.7 0.00011 2.4E-09 66.8 7.1 172 113-284 275-453 (480)
259 PF03092 BT1: BT1 family; Int 97.2 0.003 6.5E-08 59.3 10.8 123 136-258 252-382 (433)
260 TIGR00939 2a57 Equilibrative N 97.2 0.01 2.2E-07 55.6 13.7 112 141-253 309-431 (437)
261 KOG2325 Predicted transporter/ 97.1 0.0012 2.6E-08 61.6 6.6 180 98-277 256-471 (488)
262 KOG3098 Uncharacterized conser 97.1 0.042 9E-07 51.4 16.5 110 142-252 282-410 (461)
263 PF06963 FPN1: Ferroportin1 (F 97.1 0.0076 1.6E-07 56.1 11.7 131 123-253 277-415 (432)
264 TIGR00805 oat sodium-independe 97.0 0.0054 1.2E-07 60.6 10.1 150 107-256 333-581 (633)
265 KOG3810 Micronutrient transpor 97.0 0.0079 1.7E-07 53.2 9.8 213 133-350 35-263 (433)
266 KOG1330 Sugar transporter/spin 96.9 0.0034 7.3E-08 57.7 7.6 133 127-260 271-417 (493)
267 KOG3762 Predicted transporter 96.5 0.0017 3.7E-08 60.6 2.8 78 113-190 20-98 (618)
268 PF13000 Acatn: Acetyl-coenzym 96.5 0.14 3.1E-06 47.9 14.7 254 108-364 4-320 (544)
269 PF03137 OATP: Organic Anion T 96.3 0.00094 2E-08 64.3 0.0 153 104-256 305-514 (539)
270 KOG3097 Predicted membrane pro 96.0 0.069 1.5E-06 47.0 9.6 71 150-223 69-139 (390)
271 TIGR00769 AAA ADP/ATP carrier 95.3 2.4 5.3E-05 40.2 18.0 72 201-272 273-345 (472)
272 PF01733 Nucleoside_tran: Nucl 95.0 0.0079 1.7E-07 53.8 0.6 106 144-251 187-305 (309)
273 KOG3626 Organic anion transpor 94.8 0.38 8.2E-06 47.6 11.3 151 105-255 393-648 (735)
274 TIGR00939 2a57 Equilibrative N 94.6 0.76 1.7E-05 43.2 12.6 51 193-248 105-155 (437)
275 KOG1479 Nucleoside transporter 94.6 1.3 2.8E-05 40.7 13.5 111 116-228 30-150 (406)
276 KOG3880 Predicted small molecu 94.3 0.33 7.1E-06 42.6 8.6 141 141-288 64-206 (409)
277 PF01770 Folate_carrier: Reduc 94.3 0.41 9E-06 44.2 9.8 98 138-237 284-383 (412)
278 KOG0637 Sucrose transporter an 93.5 0.23 5.1E-06 45.9 6.6 132 142-275 335-490 (498)
279 KOG4830 Predicted sugar transp 93.0 0.015 3.3E-07 49.3 -1.6 65 108-172 21-94 (412)
280 TIGR00806 rfc RFC reduced fola 92.9 1.2 2.7E-05 42.0 10.5 97 141-239 300-398 (511)
281 PF03219 TLC: TLC ATP/ADP tran 92.8 9.3 0.0002 36.6 19.0 73 201-273 289-362 (491)
282 KOG1479 Nucleoside transporter 92.2 0.73 1.6E-05 42.3 7.9 109 138-250 281-399 (406)
283 KOG3810 Micronutrient transpor 91.2 3.7 8E-05 37.0 10.8 135 142-279 274-419 (433)
284 PF07672 MFS_Mycoplasma: Mycop 90.5 0.6 1.3E-05 40.0 5.2 101 226-334 2-107 (267)
285 KOG4332 Predicted sugar transp 90.0 6.9 0.00015 34.0 11.1 135 141-275 284-425 (454)
286 COG4262 Predicted spermidine s 89.8 15 0.00032 33.3 14.6 95 127-221 30-132 (508)
287 PRK10263 DNA translocase FtsK; 89.2 4.9 0.00011 42.5 11.4 19 149-167 62-80 (1355)
288 TIGR00880 2_A_01_02 Multidrug 88.7 5.3 0.00011 29.9 9.2 47 139-185 87-133 (141)
289 COG1230 CzcD Co/Zn/Cd efflux s 88.5 17 0.00037 32.1 13.2 82 101-188 22-106 (296)
290 PF06912 DUF1275: Protein of u 88.2 14 0.0003 30.8 17.5 41 221-261 153-193 (209)
291 PF12832 MFS_1_like: MFS_1 lik 87.3 1.3 2.9E-05 30.3 4.3 42 324-366 3-44 (77)
292 KOG3880 Predicted small molecu 85.4 4.2 9.1E-05 36.0 7.2 114 138-253 287-401 (409)
293 PF13000 Acatn: Acetyl-coenzym 84.6 37 0.00081 32.4 13.5 65 197-261 408-472 (544)
294 PF07672 MFS_Mycoplasma: Mycop 84.1 19 0.0004 31.2 10.5 101 142-245 144-254 (267)
295 KOG2601 Iron transporter [Inor 83.5 27 0.00058 32.1 11.5 165 108-272 31-217 (503)
296 PRK11588 hypothetical protein; 81.6 29 0.00063 33.2 11.7 33 158-190 135-169 (506)
297 KOG1237 H+/oligopeptide sympor 79.5 66 0.0014 31.6 14.9 63 193-255 457-519 (571)
298 PF11299 DUF3100: Protein of u 79.0 2.9 6.3E-05 34.9 3.8 55 198-253 175-229 (241)
299 COG5336 Uncharacterized protei 78.9 11 0.00024 27.3 6.1 19 148-166 51-69 (116)
300 COG1288 Predicted membrane pro 78.0 23 0.0005 32.9 9.4 26 253-278 212-237 (481)
301 PF12805 FUSC-like: FUSC-like 76.9 18 0.00038 31.9 8.5 36 174-210 4-39 (284)
302 PF07857 DUF1632: CEO family ( 76.0 51 0.0011 28.5 12.1 25 327-351 184-208 (254)
303 PF02694 UPF0060: Uncharacteri 74.7 7.9 0.00017 28.0 4.5 52 139-190 54-105 (107)
304 COG3202 ATP/ADP translocase [E 74.5 82 0.0018 30.1 18.0 154 123-277 165-369 (509)
305 PF05631 DUF791: Protein of un 72.3 78 0.0017 28.9 18.3 122 134-255 153-303 (354)
306 PF07760 DUF1616: Protein of u 70.9 60 0.0013 28.7 10.3 56 197-253 22-77 (287)
307 PRK02237 hypothetical protein; 70.9 14 0.00031 26.8 5.1 52 139-190 56-107 (109)
308 PF06779 DUF1228: Protein of u 70.0 34 0.00075 23.8 7.5 61 210-273 10-70 (85)
309 TIGR00844 c_cpa1 na(+)/h(+) an 68.3 85 0.0018 32.0 11.5 35 236-270 107-141 (810)
310 PF06638 Strabismus: Strabismu 68.3 34 0.00073 32.4 8.3 11 193-203 180-190 (505)
311 COG3619 Predicted membrane pro 68.2 74 0.0016 26.9 19.5 67 102-168 10-84 (226)
312 TIGR00927 2A1904 K+-dependent 67.6 33 0.00071 35.4 8.5 60 123-184 952-1011(1096)
313 KOG3574 Acetyl-CoA transporter 67.3 48 0.001 30.7 8.7 137 124-262 285-437 (510)
314 TIGR01666 YCCS hypothetical me 66.1 70 0.0015 32.3 10.7 53 158-211 42-98 (704)
315 TIGR01667 YCCS_YHJK integral m 63.2 78 0.0017 32.0 10.4 55 156-211 40-98 (701)
316 PF11947 DUF3464: Protein of u 62.2 33 0.00072 26.9 6.1 51 193-246 96-146 (153)
317 TIGR00926 2A1704 Peptide:H+ sy 61.1 47 0.001 33.2 8.5 60 193-252 564-623 (654)
318 COG2119 Predicted membrane pro 60.3 92 0.002 25.3 8.9 78 105-185 101-180 (190)
319 PF10225 DUF2215: Uncharacteri 59.5 64 0.0014 27.8 8.0 52 193-248 33-84 (249)
320 PF04226 Transgly_assoc: Trans 59.2 38 0.00083 20.6 5.0 38 241-278 6-43 (48)
321 COG4769 Predicted membrane pro 58.0 24 0.00051 27.9 4.5 53 147-207 81-133 (181)
322 PF02632 BioY: BioY family; I 56.3 52 0.0011 25.7 6.4 25 146-170 60-84 (148)
323 TIGR00801 ncs2 uracil-xanthine 55.8 1.8E+02 0.0039 27.3 14.8 98 131-232 30-132 (415)
324 TIGR03173 pbuX xanthine permea 55.0 1.8E+02 0.0039 27.1 12.3 99 131-231 20-118 (406)
325 COG1268 BioY Uncharacterized c 51.8 62 0.0013 26.4 6.3 23 146-168 89-111 (184)
326 PF12273 RCR: Chitin synthesis 51.1 6.7 0.00014 29.9 0.7 18 260-277 1-18 (130)
327 PF02535 Zip: ZIP Zinc transpo 50.6 1.8E+02 0.0039 25.8 13.6 33 194-226 260-293 (317)
328 PF06123 CreD: Inner membrane 50.2 2.3E+02 0.0049 26.8 10.5 72 157-234 309-385 (430)
329 PF03606 DcuC: C4-dicarboxylat 50.2 77 0.0017 30.2 7.8 10 161-170 106-115 (465)
330 PF06813 Nodulin-like: Nodulin 49.0 1.8E+02 0.0038 25.2 10.6 50 231-281 38-87 (250)
331 PRK11715 inner membrane protei 48.9 2.2E+02 0.0047 27.0 10.1 76 153-234 311-391 (436)
332 KOG2765 Predicted membrane pro 48.8 1.5E+02 0.0032 27.3 8.5 14 163-176 208-221 (416)
333 PF04346 EutH: Ethanolamine ut 47.2 2.2E+02 0.0048 25.9 12.4 120 142-267 50-173 (354)
334 PF11947 DUF3464: Protein of u 44.1 1.6E+02 0.0034 23.2 7.3 35 134-169 92-126 (153)
335 TIGR02230 ATPase_gene1 F0F1-AT 43.9 1.2E+02 0.0026 21.9 6.5 27 232-258 45-71 (100)
336 COG5547 Small integral membran 43.8 80 0.0017 20.0 4.4 39 169-209 8-46 (62)
337 PF10183 ESSS: ESSS subunit of 43.7 30 0.00064 25.3 3.1 32 255-286 55-86 (105)
338 COG4177 LivM ABC-type branched 42.5 1.7E+02 0.0037 26.2 8.2 61 194-255 208-268 (314)
339 PF11151 DUF2929: Protein of u 40.5 96 0.0021 19.7 6.2 41 239-279 11-51 (57)
340 TIGR02230 ATPase_gene1 F0F1-AT 40.5 1.4E+02 0.003 21.6 6.8 23 153-175 56-79 (100)
341 PF03706 UPF0104: Uncharacteri 40.2 2.5E+02 0.0054 24.4 15.1 56 135-190 23-78 (294)
342 PRK03818 putative transporter; 40.1 2.9E+02 0.0063 27.1 10.0 84 140-225 436-520 (552)
343 COG5336 Uncharacterized protei 39.2 84 0.0018 22.9 4.6 34 179-214 60-93 (116)
344 PF10785 NADH-u_ox-rdase: NADH 38.1 1.4E+02 0.003 20.9 5.6 41 150-190 29-76 (86)
345 KOG1484 Putative Zn2+ transpor 38.1 3.1E+02 0.0066 24.8 10.4 23 243-265 220-242 (354)
346 COG2233 UraA Xanthine/uracil p 38.0 3.6E+02 0.0078 25.6 13.2 122 107-231 19-142 (451)
347 PRK15049 L-asparagine permease 38.0 3.2E+02 0.007 26.3 10.1 18 258-275 446-463 (499)
348 PF06645 SPC12: Microsomal sig 37.6 59 0.0013 22.1 3.6 38 233-273 11-48 (76)
349 COG1742 Uncharacterized conser 36.8 34 0.00073 24.7 2.3 53 137-189 53-105 (109)
350 KOG3814 Signaling protein van 36.6 3.4E+02 0.0074 24.9 10.6 12 193-204 204-215 (531)
351 PTZ00370 STEVOR; Provisional 36.3 93 0.002 27.2 5.3 28 255-282 253-280 (296)
352 PF06570 DUF1129: Protein of u 35.3 2.6E+02 0.0056 23.2 11.1 25 256-280 173-197 (206)
353 COG1288 Predicted membrane pro 35.2 3.9E+02 0.0085 25.2 10.1 75 173-248 358-438 (481)
354 PF02990 EMP70: Endomembrane p 34.1 1.6E+02 0.0035 28.6 7.3 29 225-253 292-320 (521)
355 PF09527 ATPase_gene1: Putativ 34.1 1.2E+02 0.0026 18.9 6.7 34 147-180 8-42 (55)
356 PF11833 DUF3353: Protein of u 32.8 2.7E+02 0.0058 23.0 7.3 31 225-255 136-166 (194)
357 PRK10599 calcium/sodium:proton 32.7 4E+02 0.0087 24.6 9.7 26 120-145 238-263 (366)
358 PF10101 DUF2339: Predicted me 32.5 3.1E+02 0.0067 28.0 9.4 105 166-278 1-109 (745)
359 PLN02601 beta-carotene hydroxy 31.7 2.8E+02 0.0061 24.1 7.3 19 148-166 139-157 (303)
360 PF05255 UPF0220: Uncharacteri 31.6 1.5E+02 0.0033 23.7 5.6 58 222-279 14-77 (166)
361 PRK14229 camphor resistance pr 31.6 2.1E+02 0.0045 21.0 8.3 13 211-223 66-78 (108)
362 TIGR02123 TRAP_fused TRAP tran 31.2 5.5E+02 0.012 25.7 10.8 45 228-272 245-294 (613)
363 PRK04972 putative transporter; 31.0 4.7E+02 0.01 25.7 9.9 45 139-185 62-106 (558)
364 PLN02332 membrane bound O-acyl 30.9 4.6E+02 0.01 25.1 9.7 23 168-190 340-362 (465)
365 TIGR03802 Asp_Ala_antiprt aspa 30.9 3.8E+02 0.0082 26.4 9.3 82 140-226 451-534 (562)
366 PF00854 PTR2: POT family; In 30.9 1.5E+02 0.0034 27.0 6.5 50 141-190 74-123 (372)
367 COG3162 Predicted membrane pro 30.6 61 0.0013 23.2 2.7 39 312-350 13-53 (102)
368 PF11712 Vma12: Endoplasmic re 30.2 2.6E+02 0.0056 21.6 7.6 12 150-161 86-97 (142)
369 KOG4112 Signal peptidase subun 30.1 1.1E+02 0.0023 21.7 3.8 29 230-259 23-51 (101)
370 PF04281 Tom22: Mitochondrial 29.9 2.3E+02 0.005 21.9 6.0 28 218-245 59-86 (137)
371 PF04341 DUF485: Protein of un 29.7 43 0.00093 23.7 2.0 53 314-366 7-61 (91)
372 PF13937 DUF4212: Domain of un 29.6 1.9E+02 0.0042 20.0 5.9 38 241-278 24-63 (81)
373 PF00860 Xan_ur_permease: Perm 29.5 4.6E+02 0.01 24.3 10.5 97 131-231 26-127 (389)
374 PTZ00265 multidrug resistance 28.1 9.1E+02 0.02 27.3 14.3 19 257-275 195-213 (1466)
375 COG0861 TerC Membrane protein 27.7 4.1E+02 0.0088 23.1 9.5 73 194-268 16-88 (254)
376 PF11712 Vma12: Endoplasmic re 27.2 1.4E+02 0.0031 23.1 4.7 9 201-209 112-120 (142)
377 COG4698 Uncharacterized protei 27.1 67 0.0014 25.8 2.7 21 259-279 11-31 (197)
378 PF08611 DUF1774: Fungal prote 27.1 2.3E+02 0.005 20.3 5.2 45 228-278 27-71 (97)
379 PRK10457 hypothetical protein; 27.0 2.2E+02 0.0047 19.7 6.3 40 238-277 35-76 (82)
380 PF09911 DUF2140: Uncharacteri 26.9 52 0.0011 26.9 2.3 20 258-277 2-21 (187)
381 PF06808 DctM: DctM-like trans 26.7 4.6E+02 0.0099 24.6 8.8 58 215-272 118-180 (416)
382 PF11990 DUF3487: Protein of u 26.6 2.6E+02 0.0057 21.0 5.8 28 135-162 20-47 (121)
383 PF09605 Trep_Strep: Hypotheti 26.6 3.5E+02 0.0077 22.0 14.4 55 147-206 36-90 (186)
384 PF13073 DUF3937: Protein of u 26.4 1.8E+02 0.004 18.8 4.1 37 318-354 2-38 (73)
385 PF04550 Phage_holin_2: Phage 26.4 2.3E+02 0.0051 19.9 5.0 31 193-223 30-60 (89)
386 PRK14199 camphor resistance pr 26.1 3E+02 0.0064 20.9 10.0 12 212-223 80-91 (128)
387 PF07556 DUF1538: Protein of u 25.9 4E+02 0.0086 22.4 10.9 70 193-265 61-132 (212)
388 KOG4830 Predicted sugar transp 25.8 2.2E+02 0.0047 25.0 5.7 117 108-225 205-324 (412)
389 COG3086 RseC Positive regulato 25.1 3.3E+02 0.0072 21.2 6.6 14 154-167 87-100 (150)
390 KOG3097 Predicted membrane pro 24.7 1.5E+02 0.0032 26.9 4.7 73 137-209 308-382 (390)
391 PRK14200 camphor resistance pr 24.6 3.2E+02 0.0068 20.8 10.7 12 212-223 80-91 (127)
392 COG1480 Predicted membrane-ass 24.6 7.3E+02 0.016 25.0 11.3 21 158-178 389-409 (700)
393 PF11511 RhodobacterPufX: Intr 24.5 2E+02 0.0044 18.9 4.1 30 259-288 30-59 (67)
394 PF06826 Asp-Al_Ex: Predicted 24.5 3.7E+02 0.0081 21.6 9.8 80 139-223 56-137 (169)
395 PF06783 UPF0239: Uncharacteri 24.4 1.5E+02 0.0032 20.7 3.6 21 260-280 23-43 (85)
396 PRK04972 putative transporter; 23.9 7.1E+02 0.015 24.5 9.7 89 140-233 446-536 (558)
397 PRK11715 inner membrane protei 23.7 6.3E+02 0.014 23.9 13.2 68 200-276 333-400 (436)
398 PF03773 DUF318: Predicted per 23.6 5.3E+02 0.011 23.0 9.8 21 244-264 95-115 (307)
399 PF06123 CreD: Inner membrane 23.6 6.4E+02 0.014 23.9 13.7 66 201-275 328-393 (430)
400 PF01733 Nucleoside_tran: Nucl 23.4 27 0.00058 31.2 0.0 25 202-227 5-29 (309)
401 TIGR03644 marine_trans_1 proba 23.2 6.3E+02 0.014 23.7 12.6 46 204-250 299-344 (404)
402 COG2076 EmrE Membrane transpor 22.9 3.1E+02 0.0067 20.1 10.4 69 153-222 14-82 (106)
403 PF15061 DUF4538: Domain of un 22.8 78 0.0017 20.2 1.9 24 257-280 3-26 (58)
404 KOG1307 K+-dependent Ca2+/Na+ 22.5 2.6E+02 0.0056 26.6 5.9 39 127-167 447-485 (588)
405 COG1289 Predicted membrane pro 22.4 6.1E+02 0.013 25.6 9.3 21 170-190 60-80 (674)
406 KOG2946 Uncharacterized conser 22.1 4.8E+02 0.01 22.0 9.0 29 139-167 124-152 (234)
407 PF13829 DUF4191: Domain of un 22.1 2.8E+02 0.0061 23.4 5.7 38 233-273 28-65 (224)
408 PF08566 Pam17: Mitochondrial 21.8 2.6E+02 0.0056 22.5 5.1 33 130-162 68-102 (173)
409 PF03741 TerC: Integral membra 21.7 4.4E+02 0.0096 21.4 11.9 59 209-269 11-69 (183)
410 PRK14206 camphor resistance pr 21.6 3.6E+02 0.0079 20.4 10.1 12 212-223 78-89 (127)
411 PF11990 DUF3487: Protein of u 21.6 2.6E+02 0.0057 21.0 4.9 34 227-260 18-51 (121)
412 PRK14232 camphor resistance pr 21.4 3.6E+02 0.0078 20.2 9.9 12 212-223 71-82 (120)
413 PRK13108 prolipoprotein diacyl 21.0 6.8E+02 0.015 24.0 8.6 29 139-167 21-49 (460)
414 PF07456 Hpre_diP_synt_I: Hept 20.8 4.2E+02 0.0091 20.8 6.3 50 146-203 68-117 (148)
415 COG1284 Uncharacterized conser 20.7 3.7E+02 0.008 23.8 6.4 47 194-241 114-165 (289)
416 COG0786 GltS Na+/glutamate sym 20.3 4.9E+02 0.011 24.2 7.2 105 141-258 281-389 (404)
417 PF02659 DUF204: Domain of unk 20.1 2.6E+02 0.0056 18.1 4.3 26 154-179 39-64 (67)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-31 Score=233.69 Aligned_cols=250 Identities=20% Similarity=0.331 Sum_probs=225.9
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
+..+..++.+.++.|..+........++|++.+|+|++..+.|+..++|.++..++.|+...+.||+.||++++..+.++
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 34566677788888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.++.+++++++ ||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.+++.++.+.+||
T Consensus 89 i~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GW 166 (394)
T COG2814 89 IVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGW 166 (394)
T ss_pred HHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (371)
|+.|++.++++++.++..+...| |...++....+ ..+..+++|+|.++...+..++...+.+.
T Consensus 167 R~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~~~~~---------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~ 229 (394)
T COG2814 167 RATFLAIAVLALLALLLLWKLLP--PSEISGSLPGP---------------LRTLLRLLRRPGVLLGLLATFLFMTGHFA 229 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC--CccCCCCCCcc---------------hhHHHHHhcCchHHHHHHHHHHHHcchhh
Confidence 99999999999999999888888 11111111000 11234589999999999999999999999
Q ss_pred HHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 340 LLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 340 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
.++|+..++++..|++....++++.++|+
T Consensus 230 ~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv 258 (394)
T COG2814 230 LYTYIRPFLESVAGFSVSAVSLVLLAFGI 258 (394)
T ss_pred hHHhHHHHHHHccCCCHhHHHHHHHHHHH
Confidence 99999999999999999999999888765
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.4e-31 Score=231.61 Aligned_cols=265 Identities=17% Similarity=0.274 Sum_probs=235.3
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
++.|+.+++.+++++...++.+..++...|.+.++.++|.+|+|++.+.+.+.+.++.++.|.++||.+.|..+.+++++
T Consensus 24 ~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 24 KRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhH--HHHhcc
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS--PFLIHR 256 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~ 256 (371)
.++..+++++++ +.+.+.++.++.|..+|..+|.+...++.|+++++||+..++++.+-++|+.+.|++. +++..+
T Consensus 104 sai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 104 SAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999 899998
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhc-cCC-C----CcccchhhhhhcChhHHHHHHHH
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASK-E----PVKTIPWGLILSKPPVWALIVSH 330 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~----~~~~~~~~~l~~~~~~~~~~~~~ 330 (371)
.+||..|++.+++++++.++.++..+|+|+...-.+.++......+. +++ + ..++.-++.+++||.+|.++++.
T Consensus 182 ~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~ 261 (448)
T COG2271 182 GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALAN 261 (448)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHH
Confidence 99999999999999999999999999998865433333322111111 111 1 11234566788999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 331 FCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 331 ~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
++.+..-+++..|.|.|+.+..|++...++...+.
T Consensus 262 vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~l 296 (448)
T COG2271 262 VFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISL 296 (448)
T ss_pred HHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999998887664
No 3
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.97 E-value=1.2e-29 Score=236.02 Aligned_cols=263 Identities=21% Similarity=0.323 Sum_probs=216.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
.+|..+..+++.+++++++...++...|.+.+++|++..++|++.+++.+++++++++.|+++||+|||+++.++.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 46778888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-----
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----- 255 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 255 (371)
++.+++++++ |++.+++.|+++|++.+...+....++.|++|+++|+++++++..+..+|.++++++++++.+
T Consensus 85 ~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 85 IASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999999 999999999999999999999999999999999999999999999999999999999998864
Q ss_pred -ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhh---cc-----CC---CCcc---cchhhhhhcC
Q 017461 256 -RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS---CA-----SK---EPVK---TIPWGLILSK 320 (371)
Q Consensus 256 -~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~---~~~~---~~~~~~l~~~ 320 (371)
..|||+.|++.++++++..++.+++.||+|...+...+++++...+. .. .+ .+.+ ...++.++ +
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 241 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-T 241 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-C
Confidence 36999999999988888777777777887754322222222111000 00 00 0000 12344444 5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHh-cCCChhhhhhhhhhe
Q 017461 321 PPVWALIVSHFCHNWGTFILLTWMPTYYNQV-SSFGSKTLSETVQVC 366 (371)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~s~~~~~~~~~~~ 366 (371)
+.+|...+.+++....++.+.+|+|.|+++. .|++..+++.+....
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~ 288 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIP 288 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHH
Confidence 8888888888888889999999999999883 467877777654443
No 4
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.97 E-value=2.1e-29 Score=239.78 Aligned_cols=262 Identities=14% Similarity=0.140 Sum_probs=220.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
++|..+..++++.++..++.+++++.+|.+.+++|.+.++.+|+.+.|.++..++.+++|+++||+|||++++++.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~ 82 (495)
T PRK14995 3 RQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFG 82 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhccc-CCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
++.+++++++ |++.++++|+++|+|.+...+.....+.+.+ |+++|++++|++.....+|.++||.+++.+.++.||
T Consensus 83 ~~~~~~~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gw 160 (495)
T PRK14995 83 LASLAAAFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYW 160 (495)
T ss_pred HHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh
Confidence 9999999999 9999999999999999998888888887776 678999999999999999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHH----------------------------------------H
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL----------------------------------------I 299 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------~ 299 (371)
||.|++...++++..++.+++.|+++.++.+..+..... .
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 999999888888777777777776543322111100000 0
Q ss_pred hhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhee
Q 017461 300 VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 300 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
..+ .+.+.+..++ +++|++.++...+..++.....++...++|.|++..+|+++.++|+++...+
T Consensus 241 ~~e--~~~~~p~~~~-~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~ 305 (495)
T PRK14995 241 RTQ--LAASRPMIDM-RLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVM 305 (495)
T ss_pred HHH--hcCCCCCcCH-HHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 011 1122223343 4789999988888888888888888899999999999999999999876543
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.97 E-value=6.3e-29 Score=235.30 Aligned_cols=269 Identities=31% Similarity=0.518 Sum_probs=227.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh----------------------hcCCCcchHHHHHHHHHHHHHH
Q 017461 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSA----------------------EFNWNPATVGLIQSSFFWGYLL 154 (371)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~s~~~~~~~~ 154 (371)
...+.+|.+..+++++..+.+.++..++...+.+.+ +++++..+.|++.+++.+++.+
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~ 91 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQII 91 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHH
Confidence 356678888999999999999999999988888776 7899999999999999999999
Q ss_pred HHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHH
Q 017461 155 TQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLAL 234 (371)
Q Consensus 155 ~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 234 (371)
++++.|+++||+|+|+++.++.++++++.+++.++...+++.+++.|+++|++.+...+....+++|++|+++|++++++
T Consensus 92 ~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 171 (465)
T TIGR00894 92 IQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGM 171 (465)
T ss_pred HHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHH
Confidence 99999999999999999999999999998887655322688899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHhcc-cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccC--CCCccc
Q 017461 235 VYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCAS--KEPVKT 311 (371)
Q Consensus 235 ~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 311 (371)
...+..+|.++++++++.+.+. .|||+.|++.++++++..++.+.+.+++|..++...+.+++...+..+. ++....
T Consensus 172 ~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 251 (465)
T TIGR00894 172 STSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQS 251 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCC
Confidence 9999999999999999999988 4999999999998888777777777776654443333333222221111 111224
Q ss_pred chhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 312 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
.+++++++++.+|...+..++.....+.+.+|+|.|+++.+|++..+.+++.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~ 305 (465)
T TIGR00894 252 LPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSL 305 (465)
T ss_pred CCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHH
Confidence 568899999999999999999999999999999999999899999998887543
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.97 E-value=3.9e-29 Score=234.40 Aligned_cols=264 Identities=16% Similarity=0.231 Sum_probs=211.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
.++.++...++.+++.+++...++..+|.+.+++|++..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~ 99 (434)
T PRK11663 20 WRRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATG 99 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHH
Confidence 34556667777888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
++.+++++++ +++.+++.|++.|++.|..++...+++.|++|+++|+++++++..+.++|.++++.+++.+.+.+|||
T Consensus 100 ~~~~~~~~~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~ 177 (434)
T PRK11663 100 IINILFGFSS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWR 177 (434)
T ss_pred HHHHHHHHHh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHH
Confidence 9999999999 99999999999999999989999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChH---HHHHHhhhccCCCCcccch-h-hhhhcChhHHHHHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA---EKKLIVSSCASKEPVKTIP-W-GLILSKPPVWALIVSHFCHNW 335 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~-~~l~~~~~~~~~~~~~~~~~~ 335 (371)
+.|++.+++.++..++..++.+|++......... ++.....+..++++..... + ...++++.+|.+.+..++...
T Consensus 178 ~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (434)
T PRK11663 178 YGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYV 257 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHH
Confidence 9999988877766555555556654322111000 0000000000000000111 1 225678889988888888888
Q ss_pred HHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 336 GTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 336 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
.+..+.+|+|.|+.+.+|++..+++...+..
T Consensus 258 ~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~ 288 (434)
T PRK11663 258 VRAAINDWGNLYMSETLGVDLVTANSAVSMF 288 (434)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHHHHHHHHH
Confidence 8888899999999877899999988776544
No 7
>PRK03545 putative arabinose transporter; Provisional
Probab=99.97 E-value=8.7e-29 Score=229.08 Aligned_cols=246 Identities=16% Similarity=0.267 Sum_probs=204.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
++|..++.+.++.+..........+++|.+.+++|.+..+.+++.+++.+++.+++++.|++.||+|||+++.++.++++
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 85 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFI 85 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 34554555555555544444556677899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
++.+++.+++ |++.++++|+++|++.+...+...+++.|++|+++|++++|++..+.++|.+++|++++.+.+.+|||
T Consensus 86 ~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~ 163 (390)
T PRK03545 86 ASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWR 163 (390)
T ss_pred HHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHH
Confidence 9999999999 99999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (371)
+.|++.++++++..++.+...|+.+++++ . ...++++++|++.++...+..++.....+..
T Consensus 164 ~~f~~~~~~~~l~~~~~~~~~~~~~~~~~---~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (390)
T PRK03545 164 TTFLAIGGGALITLLLLIKLLPLLPSEHS---G----------------SLKSLPLLFRRPALVSLYLLTVVVVTAHFTA 224 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCCc---c----------------hHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 99999998887776666655555432110 0 0123556889999887777777666667767
Q ss_pred HHhhHHHHHHhcCCChhhhhhhhhhee
Q 017461 341 LTWMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 341 ~~~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
..+++.|+++.+|++..+++.+.+..+
T Consensus 225 ~~~~~~~l~~~~g~s~~~~~~~~~~~~ 251 (390)
T PRK03545 225 YSYIEPFVQQVAGLSENFATLLLLLFG 251 (390)
T ss_pred HHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 788888888878999998888765543
No 8
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.9e-28 Score=227.15 Aligned_cols=235 Identities=39% Similarity=0.792 Sum_probs=219.1
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhc
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
..+++++..+.+++.+.+..|+++++++.|++.||||.|+++..+.++.++++++..++...+++.+++.|+++|++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 34688899999999999999999999999999999999999999999999999999999866778889999999999999
Q ss_pred hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc-cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCC
Q 017461 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDP 289 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
.+++...+.+.|+|+++|++..++...+..+|.+++-+++|++.+. .||+++|++.++++++..++++.+..|+|.+++
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence 9999999999999999999999999999999999999999999998 999999999999999999999999999999988
Q ss_pred CCChHHHHHHhhhccCCCCc--ccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 290 QLRPAEKKLIVSSCASKEPV--KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
....+|.+.+...+.+++.. ...||+++++++.+|.+.+..++...+.+.+..|+|.|+++++|++..+.|++.++
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~sal 302 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSAL 302 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHH
Confidence 88888888777666554443 47899999999999999999999999999999999999999999999999988654
No 9
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.97 E-value=1.6e-28 Score=224.23 Aligned_cols=228 Identities=12% Similarity=0.123 Sum_probs=188.1
Q ss_pred HhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhH
Q 017461 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPF 196 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~ 196 (371)
......+++.+|.+.+|+|++..+.|++.+.+.+++++++++.|+++||+|||+++..+.+....+.+.....+ +++.
T Consensus 4 ~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~ 81 (368)
T TIGR00903 4 QAIWVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPF--NYEW 81 (368)
T ss_pred hHHHHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhc--cHHH
Confidence 34456678999999999999999999999999999999999999999999999887666555555443333336 8999
Q ss_pred HHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHH
Q 017461 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (371)
Q Consensus 197 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 276 (371)
++++|+++|+|.+. .......++|++|+++|++++++...+..+|.++++++++.+.+.+|||+.|++.++++++..++
T Consensus 82 l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 99999999999986 45666667999999999999999999999999999999999999999999999999998888888
Q ss_pred HhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCCh
Q 017461 277 WLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGS 356 (371)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 356 (371)
.+++.||+|+.+++..+.+ +...++++++++|.+|.+.+.+++....++++.+|+|.|+++ .|++.
T Consensus 161 ~~~~lp~~p~~~~~~~~~~-------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~ 226 (368)
T TIGR00903 161 VLAALPALPFQAAEGFGFK-------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLED 226 (368)
T ss_pred HHHHcCCCCCCCCCCcchH-------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCh
Confidence 8888888765432111000 001246789999999999999999999999999999999987 67876
Q ss_pred hhhhhh
Q 017461 357 KTLSET 362 (371)
Q Consensus 357 ~~~~~~ 362 (371)
. .+..
T Consensus 227 ~-~~~~ 231 (368)
T TIGR00903 227 I-AGDA 231 (368)
T ss_pred H-HHHH
Confidence 4 4443
No 10
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=7.3e-28 Score=224.08 Aligned_cols=245 Identities=13% Similarity=0.099 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
....+.+..++..+......+.+|.+.+++|.+..+.++..+++.++++++++++|+++||+|||++++++.++++++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 96 (413)
T PRK15403 17 FPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACA 96 (413)
T ss_pred HHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHH
Confidence 33344455556667778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
++.+++ +++.++++|+++|++.+...+....++.|++++++|+++++++..+..+|..+||++++.+.+..|||+.|+
T Consensus 97 ~~~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~ 174 (413)
T PRK15403 97 ATLFTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFA 174 (413)
T ss_pred HHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999 999999999999999887777778899999999999999999999999999999999999998889999999
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
+.+++.++..++.++..||++.++++.... +....+++.++|+|.++...+..++.....+.+..+.
T Consensus 175 ~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~-------------~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~ 241 (413)
T PRK15403 175 IIAVMGLIAFVGLLLAMPETVKRGAVPFSA-------------KSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVS 241 (413)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCCCCh-------------HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999888777666566566654321111000 0012356778999999998888888888888888999
Q ss_pred HHHHHHhcCCChhhhhhhhh
Q 017461 345 PTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 345 ~~~l~~~~g~s~~~~~~~~~ 364 (371)
|.++++.+|+++.+.++...
T Consensus 242 P~~l~~~~g~s~~~~gl~~~ 261 (413)
T PRK15403 242 PVILIDAGGMTTSQFAWTQV 261 (413)
T ss_pred hHHHHHhcCCCHHHHHHHHH
Confidence 99999988999999888653
No 11
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.96 E-value=1e-27 Score=221.84 Aligned_cols=247 Identities=17% Similarity=0.255 Sum_probs=201.5
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
.+..|..+..+.+..+......+.....+|.+.+++|.++++.++..+++.++..+++++.|+++||+|||++++++.++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 34466665556655555555555666778999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.+++.+++.+++ +++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+.+|
T Consensus 95 ~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g 172 (394)
T PRK10213 95 LTLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIG 172 (394)
T ss_pred HHHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999998 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHH
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (371)
||+.|++.++++++..++.+...|+++.++++ ...+..+.+|+|.++...+..++.....+
T Consensus 173 w~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 233 (394)
T PRK10213 173 WRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSH-------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQF 233 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCccccc-------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 99999998877766555554445553321100 01123467889999887777677666777
Q ss_pred HHHHhh-HHHHHHhcCCChhhhhhhhhhee
Q 017461 339 ILLTWM-PTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 339 ~~~~~~-~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
...+++ |.|.+ .+|+++.+++.+....+
T Consensus 234 ~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~ 262 (394)
T PRK10213 234 AFFTYIRPVYMN-LAGFGVDGLTLVLLSFG 262 (394)
T ss_pred HHHHHHHHHHHH-hcCCChhHHHHHHHHHH
Confidence 777776 55554 47999998888766543
No 12
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.96 E-value=4.8e-29 Score=235.95 Aligned_cols=264 Identities=17% Similarity=0.180 Sum_probs=211.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
..+.++.+++++++..++++..+++..|.+.+++|++..+.|++.+++.+++.+++++.|+++||+|+|+++.++.++++
T Consensus 26 ~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 105 (467)
T PRK09556 26 PFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHH
Confidence 35667778888888899999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHhhh-----hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 181 IATALTPV-----AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 181 i~~~~~~~-----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
++.++.++ ++ +++.++++|+++|++.+...+...++++|++|+++||+++|++..+.++|.++++++...+.+
T Consensus 106 ~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~ 183 (467)
T PRK09556 106 ICMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN 183 (467)
T ss_pred HHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH
Confidence 77766665 46 899999999999999999999999999999999999999999999999999999999877766
Q ss_pred cc---CchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHH-H-hhhc--cCCCCcc-cch-hhhhhcChhHHHH
Q 017461 256 RF---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKL-I-VSSC--ASKEPVK-TIP-WGLILSKPPVWAL 326 (371)
Q Consensus 256 ~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~--~~~~~~~-~~~-~~~l~~~~~~~~~ 326 (371)
.. +||..|.+.+++.++..++.+++.++.|.+......++... . ..+. .++++.. ... .+.+++++.+|..
T Consensus 184 ~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 263 (467)
T PRK09556 184 YFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLL 263 (467)
T ss_pred hhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHH
Confidence 43 69999998888888777776666666554322211111000 0 0000 0000100 011 2237899999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 327 IVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
.+..++....+++..+|+|.|+++.+|++..++++..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~ 303 (467)
T PRK09556 264 CFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLF 303 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHH
Confidence 9999998888889999999999988999999988776543
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.96 E-value=3.6e-28 Score=224.76 Aligned_cols=252 Identities=27% Similarity=0.497 Sum_probs=213.0
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 192 (371)
+++..++...++...|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~-- 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG-- 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--
Confidence 345667778888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
+++.++++|++.|++.+...+....++.|++|+++|++++++......+|.++++.+++.+.+..|||+.|++.+++.++
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 160 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGII 160 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888887
Q ss_pred HHHHHhhcccCCCCCCCCCChHHHHHHhhh------ccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 273 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSS------CASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
..++.++..++++.+++...++++...... .+++++.....+++++++|+++...+..++.......+..++|.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (399)
T TIGR00893 161 WGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPT 240 (399)
T ss_pred HHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 777776666666554332222222111111 11111223445678899999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhhhe
Q 017461 347 YYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 347 ~l~~~~g~s~~~~~~~~~~~ 366 (371)
|+++.+|+++.+++.+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~ 260 (399)
T TIGR00893 241 YLVQERGLSILEAGFMASLP 260 (399)
T ss_pred HHHHHhcccHHHhhHHHHHH
Confidence 99988899998888776543
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.96 E-value=4.1e-27 Score=220.67 Aligned_cols=246 Identities=15% Similarity=0.156 Sum_probs=190.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcC---CCcchHHHHHH---HHHHHHHHHHHHHHHhhhhhCCchhHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFN---WNPATVGLIQS---SFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 174 (371)
+++..+..++++.++++++...++...|.+.++++ .+..+.+.+.+ ...++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 45666777788899999999999999999999985 44554444444 4445555999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhccChh--------HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHH
Q 017461 175 GVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (371)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (371)
+.++++++.+++++++ ++. .++++|+++|++.|..++...++++|++|+++|+++.++...+...|.+++
T Consensus 99 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~ 176 (432)
T PRK10406 99 SVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLA 176 (432)
T ss_pred HHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999998 654 588999999999999999999999999999999999999988888888888
Q ss_pred HHhHHHHh--------cccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhh
Q 017461 247 LAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (371)
Q Consensus 247 ~~~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (371)
+.+...+. +.+|||++|++.++++++.. +.....||++.. +.+. ++ +..++++++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~-~~~~~~~e~~~~-------~~~~-------~~--~~~~~~~l~ 239 (432)
T PRK10406 177 LLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVAL-WLRRQLDETSQQ-------ETRA-------LK--EAGSLKGLW 239 (432)
T ss_pred HHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHH-HHHhcCCCCchH-------HHhh-------hc--ccccHHHHH
Confidence 87765543 25799999998777665543 223333443221 1000 00 123577888
Q ss_pred cChhHHHHHHHHHHH-HHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 319 SKPPVWALIVSHFCH-NWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
++++++...+..++. ...++.+.+|+|.|+++.+|++..+++...++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i 287 (432)
T PRK10406 240 RNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTA 287 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 998888766665543 66788889999999988789998888776554
No 15
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.96 E-value=6.9e-27 Score=215.93 Aligned_cols=242 Identities=13% Similarity=0.194 Sum_probs=206.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 188 (371)
+.+..+..........+..|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~ 89 (385)
T TIGR00710 10 LGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLAL 89 (385)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 33334555667777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
++ +++.++++|++.|++.+...+...+++.|++|+++|++++++......+|..+++.+++.+.+..|||+.|++.++
T Consensus 90 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~ 167 (385)
T TIGR00710 90 SN--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSL 167 (385)
T ss_pred Hc--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99 9999999999999999999999999999999999999999999999999999999999999998999999999888
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 017461 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (371)
+.++..++.++..||.+..+++...++ ....+++++++++++...+...+.....+....+.|.++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (385)
T TIGR00710 168 AGILLSALIFFILPETLPYEARIQIST--------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVY 233 (385)
T ss_pred HHHHHHHHHHHhCCCCCCCcccCCHHH--------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHH
Confidence 877777766666666543322111111 123456788999999888887777778888888999999
Q ss_pred HHhcCCChhhhhhhhhhe
Q 017461 349 NQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 349 ~~~~g~s~~~~~~~~~~~ 366 (371)
++.+|+++.+++.+....
T Consensus 234 ~~~~g~~~~~~g~~~~~~ 251 (385)
T TIGR00710 234 IDIMGVSPSVFGLLFALN 251 (385)
T ss_pred HHHcCCCHHHHHHHHHHH
Confidence 888899999988876544
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.96 E-value=9.1e-27 Score=220.49 Aligned_cols=257 Identities=13% Similarity=0.113 Sum_probs=198.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
+++..+.......+...+....+.+..|.+.+++|++..+.+++.+++.+++.+++++.|+++||+|||+++.++.++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~ 112 (476)
T PLN00028 33 PHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTA 112 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34455555666666666667778888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh----c-
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI----H- 255 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----~- 255 (371)
++.+++++++ +++.++++|++.|++.+.. .....+++|++|+++||+++|+.....++|..+++.+.+.+. +
T Consensus 113 ~~~~~~~~~~--s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~ 189 (476)
T PLN00028 113 PAVFCMSLVS--SATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDA 189 (476)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999 9999999999999998864 445678899999999999999998877777777766665442 2
Q ss_pred ----ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHH
Q 017461 256 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (371)
Q Consensus 256 ----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (371)
..|||++|++.++++++..++.+++.++.|... ..+.. ++.+.++......+++.++++++|.+.+.++
T Consensus 190 ~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (476)
T PLN00028 190 GAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGN----YRELK---KSGTMPKDSFSKVLRYGVTNYRTWILALTYG 262 (476)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCc----hhhHH---hcCccccccHHHHHHHHHcCchhHHHHHHHH
Confidence 258999999999988877776666555444321 00100 0000011111234566788899998888877
Q ss_pred HHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhee
Q 017461 332 CHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
+.....+.+..++|.|+.+.+|+++.+++.+.++.+
T Consensus 263 ~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~ 298 (476)
T PLN00028 263 YSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFG 298 (476)
T ss_pred HHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 777777778889999998878999999888765543
No 17
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.96 E-value=5.3e-27 Score=223.44 Aligned_cols=257 Identities=14% Similarity=0.207 Sum_probs=215.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
.+..++++.++..++....++..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 45667778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
++++++ +++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++.+.+++|||+.|+
T Consensus 83 ~~~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 83 LCGVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HHhCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 999999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCCCCCChHHHH---------------------------H--------------Hhhhc
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK---------------------------L--------------IVSSC 303 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~--------------~~~~~ 303 (371)
+.++++++..++.++..|++++...+..+.... . ...+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T TIGR00711 161 INVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWEL 240 (485)
T ss_pred hhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988888777776666666543322211110000 0 00001
Q ss_pred cCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 304 ASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
+++++..+ .++++++.++...+..++..+.++...+++|.|+++.+|+++.+++++....
T Consensus 241 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~ 300 (485)
T TIGR00711 241 --TDDNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPV 300 (485)
T ss_pred --cCCCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 11111222 2478899999888888888889999999999999998999999999887654
No 18
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.96 E-value=1.7e-26 Score=224.88 Aligned_cols=186 Identities=15% Similarity=0.200 Sum_probs=166.8
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
.+.+|.++++++++.+..+++...++.++|.+.+++|++..+.+++.+++.++.+++++++|+++||+|||+++++++++
T Consensus 162 ~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 162 GRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 46678888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc--
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-- 256 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-- 256 (371)
.+++.+++++++ +++.++++|++.|++.|+..+...++++|++|+++|++.++++..++.+|.++++.++..+...
T Consensus 242 ~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 242 NGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred HHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999888776643
Q ss_pred -----------cCchhHHHHHhHHHHHHHHHHhhcccCCCCC
Q 017461 257 -----------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (371)
Q Consensus 257 -----------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
.+||+.+++.++.+++. ++.+++.||+|+.
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~-ll~~~~lPESPrw 360 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFA-IGALTFMPESPRF 360 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHH-HHHHHHcCCCHHH
Confidence 35899888877655544 4555667888763
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.95 E-value=1.7e-26 Score=214.94 Aligned_cols=251 Identities=14% Similarity=0.118 Sum_probs=211.6
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
+++.++....+.+..++..+....+.+.+|.+.+++|.+..+.++..+.+.+++.+++++.|+++||+|||+++.++.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 45667777778888888888888888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.+++.+++.+++ +++.+++.|+++|++.+...+...+++.|++|+++|+++.++......+|..++|.+++.+.+..|
T Consensus 88 ~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 999999999998 999999999999999998888899999999999999999999988889999999999999999899
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHH
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (371)
||+.|++.+++.++..+..++..||++.+.++.... ++...+++.++++|.++...+..++......
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSL-------------KELGRDYKLVLKNRRFVAGALALGLVSLPLL 232 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccH-------------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH
Confidence 999999988888777666665566554322111000 0012345678899999988888777777777
Q ss_pred HHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 339 ILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 339 ~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
.+.++.|.|+.+.+|+++.+.+....
T Consensus 233 ~~~~~~p~~~~~~~g~~~~~~g~~~~ 258 (406)
T PRK15402 233 AWIALSPVILISGEQLSSYEYGLLQV 258 (406)
T ss_pred HHHHHhHHHHHHHhCCCHHHHHHHHH
Confidence 77788899988878999988877644
No 20
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.95 E-value=1.8e-26 Score=212.93 Aligned_cols=241 Identities=15% Similarity=0.237 Sum_probs=201.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
+....+..+..........+.+|.+++++|.+..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l 84 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAM 84 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHH
Confidence 34455566677777778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
+++++ |++.+++.|++.|++.+...+....++.|++++++|++++++...+..+|..+++++++.+.+..|||+.|++
T Consensus 85 ~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~ 162 (382)
T PRK10091 85 FTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLL 162 (382)
T ss_pred HHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHH
Confidence 99999 9999999999999999988888889999999999999999999999999999999999999998999999999
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
.+++.++..+..+++.|+.+++.+. .. ...+ +.++++.+|...+..++...+.+....+++
T Consensus 163 ~~~~~~~~~~~~~~~lp~~~~~~~~-~~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK10091 163 IAVFNIAVLASIYFWVPDIRDEAKG-GL-----------------REQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIK 223 (382)
T ss_pred HHHHHHHHHHHHHHhCCCCCccccc-CH-----------------HHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988777766666666664321110 00 0112 356777777766666666666666677788
Q ss_pred HHHHHhcCCChhhhhhhhhhee
Q 017461 346 TYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 346 ~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
.|+.+.+|+++.+.+++.+..+
T Consensus 224 ~~~~~~~g~s~~~~~~~~~~~~ 245 (382)
T PRK10091 224 PYMMFISGFSETSMTFIMMLVG 245 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHH
Confidence 8888778999999988776544
No 21
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.95 E-value=1.6e-26 Score=217.80 Aligned_cols=264 Identities=15% Similarity=0.215 Sum_probs=200.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
++|.++..+++.....++++..++...|.+.++ |++..+.+++.+++.++.++++++.|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~ 104 (452)
T PRK11273 26 LRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAA 104 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHH
Confidence 456666666667777777777778888998888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhc--cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHH-HHHHhHHHHhccc
Q 017461 181 IATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRF 257 (371)
Q Consensus 181 i~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 257 (371)
++.+++++++. .+++.++++|++.|++.+...+.....+.|++|+++|+++++++..+.++|.. ++|+++..+....
T Consensus 105 i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 184 (452)
T PRK11273 105 AVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN 184 (452)
T ss_pred HHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc
Confidence 99988887631 16788999999999999988888888899999999999999999999999864 4555544444445
Q ss_pred CchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhh---ccCCCCcccch--hhhhhcChhHHHHHHHHHH
Q 017461 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSS---CASKEPVKTIP--WGLILSKPPVWALIVSHFC 332 (371)
Q Consensus 258 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~ 332 (371)
|||+.|++.+++.++..++.+++.+|+++.......++.+....+ ..++++.+..+ .+.++|++.+|...+..++
T Consensus 185 gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 264 (452)
T PRK11273 185 DWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVF 264 (452)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHH
Confidence 999999999888877777766667776543211111111000000 00001000111 2336788999998888888
Q ss_pred HHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 333 HNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
.....+....|+|.|+++.+|++..+++.+...
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~ 297 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFL 297 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 888888899999999999889998888766543
No 22
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.95 E-value=2.3e-27 Score=216.29 Aligned_cols=248 Identities=27% Similarity=0.500 Sum_probs=200.1
Q ss_pred HHHHHHHHhhhhhhhhhhh-hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh
Q 017461 110 FSAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (371)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 188 (371)
+++.++..+......+..| .+.+++|.+..+++++.+++.++..+++++.|+++||+|||+++.++.++.+++.++..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhh
Confidence 4556677777778888888 899999999999999999999999999999999999999999999999999999777667
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
++ +.+.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|.+++|.+++.+.+..|||+.|++.++
T Consensus 82 ~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 82 AS--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp HC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hh--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 67 8889999999999999999999999999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccch-hhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIP-WGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
+.++.+++...+.++++.++....+.+++ .+.+....+ ++.+++++.+|...+..++..+.......++|.|
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKESE-------SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLY 232 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTTTT---------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHhhhhhhcccccccccccccc-------cccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchh
Confidence 98888776545555444433222221110 000111223 6777888888766666666667888899999999
Q ss_pred HHHhcCCC-hhhhhhhhhhe
Q 017461 348 YNQVSSFG-SKTLSETVQVC 366 (371)
Q Consensus 348 l~~~~g~s-~~~~~~~~~~~ 366 (371)
+.+.+|++ ..+.+.+....
T Consensus 233 l~~~~~~~~~~~~~~~~~~~ 252 (352)
T PF07690_consen 233 LQEVLGFSGPSQAGLLFSIF 252 (352)
T ss_dssp CCHHHHCCTHHHHHHHHHHH
T ss_pred hhhccCCCHHHHHHHHHHHH
Confidence 88888999 78887655443
No 23
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.95 E-value=6.1e-29 Score=220.71 Aligned_cols=246 Identities=18% Similarity=0.231 Sum_probs=212.1
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHH
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 177 (371)
..+..++.+.++++...++.++.+.+.-..+.+++.||++++..|++.+++.+++++++|++|+++|||+||+++.+|..
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~ 106 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIF 106 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHH
Confidence 34456777888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 178 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 178 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
+++++.++++++. .+|+++++|.+.|+|.+...++++++++|.||.++|++++++++.+..+|..+|.+.+..+.+..
T Consensus 107 iW~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~ 184 (493)
T KOG1330|consen 107 IWTLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLT 184 (493)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCc
Confidence 9999999999998 99999999999999999999999999999999999999999999999999999999999988876
Q ss_pred C-chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHH
Q 017461 258 G-WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 336 (371)
Q Consensus 258 g-w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 336 (371)
+ |||.|++.++++++++++.+++.+|+++...++.+.+.+. .........+.+.+.+++.+....+.+....+.
T Consensus 185 ~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~-----~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv 259 (493)
T KOG1330|consen 185 FWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM-----VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFV 259 (493)
T ss_pred cceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcC-----CCCccchHHHHHHHHccCceeeehHHHHHHHHh
Confidence 6 9999999999999999999999988876533322221110 111222245666677778888777777777777
Q ss_pred HHHHHHhhHHHHHH
Q 017461 337 TFILLTWMPTYYNQ 350 (371)
Q Consensus 337 ~~~~~~~~~~~l~~ 350 (371)
...+..|.|.++..
T Consensus 260 ~Gs~sww~p~~~~~ 273 (493)
T KOG1330|consen 260 IGSLSWWAPAFIYY 273 (493)
T ss_pred ccccchhhhhHHHH
Confidence 77777777777654
No 24
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.95 E-value=1.8e-26 Score=213.57 Aligned_cols=244 Identities=14% Similarity=0.219 Sum_probs=196.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
..|.....++.+.+..... ..+++.+|.+++++|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~ 85 (393)
T PRK09705 7 LNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIA 85 (393)
T ss_pred hHHHHHHHHHHHHHcchhh-hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHH
Confidence 3455555555554443333 667899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-Cc
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GW 259 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw 259 (371)
++.+++++++ +++.++++|+++|+|.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.++. +|
T Consensus 86 ~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w 162 (393)
T PRK09705 86 VGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETW 162 (393)
T ss_pred HHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 9999999999 99999999999999999999999999999996 88999999999999999999999999988875 89
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (371)
|+.+.+.++..++..+..+...++.+..+++ ++ ....+.++++++|.+.+..++....++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~---~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 223 (393)
T PRK09705 163 YQTLAWWALPAVVALFAWWWQSAREVASSHK----------------TT---TTPVRVVFTPRAWTLGVYFGLINGGYAS 223 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCccccC----------------CC---cCCcccccCHhHHHHHHHHHHHHHHHHH
Confidence 9988776665544433333222222211000 00 0112356788888888888788888889
Q ss_pred HHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 340 LLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 340 ~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
...|+|.|+++ +|++..+++.+.+..++
T Consensus 224 ~~~~lp~~l~~-~g~s~~~ag~~~~~~~i 251 (393)
T PRK09705 224 LIAWLPAFYIE-IGASAQYSGSLLALMTL 251 (393)
T ss_pred HHHHHHHHHHH-cCCChhhhhHHHHHHHH
Confidence 99999999988 79999999988765543
No 25
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.95 E-value=3.4e-26 Score=212.97 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=207.9
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHH
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 177 (371)
..+++|.++.++++..++.+++....+...|.+.+++|.++.+.+++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~ 88 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVA 88 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHH
Confidence 34578889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 178 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 178 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
+.+++.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..
T Consensus 89 ~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 89 LFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999998 99999999999999999999999999999999999999999999999999999999999998889
Q ss_pred CchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhc---ChhHHHHHHHHHHHH
Q 017461 258 GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS---KPPVWALIVSHFCHN 334 (371)
Q Consensus 258 gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~ 334 (371)
+||+.|++.+++.++.+++...+.||++....+....+. + ....+.+++ .+..+.+.+..++..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQ---------R----APVLRALFGEGRATATLLLWISYFFTL 233 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchh---------h----hhhHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 999999998877776666666666765432211100000 0 011112222 223344445555556
Q ss_pred HHHHHHHHhhHHHHHHhcCCChhhhhhhhhhee
Q 017461 335 WGTFILLTWMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 335 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
...+....|+|.|+++ .|+++.+++.+.+..+
T Consensus 234 ~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~ 265 (406)
T PRK11551 234 IVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFN 265 (406)
T ss_pred HHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHH
Confidence 6677788899999988 6999998888776543
No 26
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.95 E-value=2.9e-27 Score=217.60 Aligned_cols=253 Identities=17% Similarity=0.223 Sum_probs=208.3
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc
Q 017461 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (371)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 191 (371)
+++..+++...++...|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~- 81 (379)
T TIGR00881 3 GYAAYYLVRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST- 81 (379)
T ss_pred hhhHHHHhHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh-
Confidence 4566777888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHH-HhHHHHhcccCchhHHHHHhHHH
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL-AFSPFLIHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~-~~~~~l~~~~gw~~~f~~~~~~~ 270 (371)
+++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .+++.+.+..+||+.|++.+++.
T Consensus 82 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 82 -SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred -hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999 57777778889999999988888
Q ss_pred HHHHHHHhhcccCCCCCCCCCChHHHHHH-----hhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 271 TVWFTVWLSKAHSSPAEDPQLRPAEKKLI-----VSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
++..++.+++.++++........++.... .++.+++.......++.+++++.++.+.+..++.......+..++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (379)
T TIGR00881 161 IIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSP 240 (379)
T ss_pred HHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766666665543211111000000 0000011111223456788899999998888888888899999999
Q ss_pred HHHHHhcCCChhhhhhhhhhe
Q 017461 346 TYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 346 ~~l~~~~g~s~~~~~~~~~~~ 366 (371)
.|+.+.+|+++.+++.+....
T Consensus 241 ~~~~~~~g~~~~~~~~~~~~~ 261 (379)
T TIGR00881 241 LYLTQEKGFSKEKASWAFTLY 261 (379)
T ss_pred HHHHHHhCCCHHHHHHHHHHH
Confidence 999988899999888776554
No 27
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.95 E-value=3.4e-26 Score=212.63 Aligned_cols=266 Identities=15% Similarity=0.202 Sum_probs=200.5
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHH
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 177 (371)
..+++|+.+..++++.+...++....++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~ 85 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIV 85 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 34577888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 178 WWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 178 ~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
+.+++.+++++++ +++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..
T Consensus 86 ~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 86 LFSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999998876
Q ss_pred C--chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHH-HHHHhhhccCCCCccc-------chhhhhh-cCh-hHHH
Q 017461 258 G--WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAE-KKLIVSSCASKEPVKT-------IPWGLIL-SKP-PVWA 325 (371)
Q Consensus 258 g--w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~~~l~-~~~-~~~~ 325 (371)
+ ||+.|++.++..++.. +.....||++....+....+ ......+....++... ...++.. +++ .+..
T Consensus 164 ~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T TIGR00891 164 GDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVY 242 (405)
T ss_pred CccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHH
Confidence 6 9999988665544433 33344455433211111000 0000000000000000 0011111 111 1223
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 326 LIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
+.+...+..........++|.|+.+.+|++..+++.+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~ 283 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFS 283 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHH
Confidence 33344444555566778889999888899999988876544
No 28
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.95 E-value=1.1e-25 Score=214.09 Aligned_cols=255 Identities=16% Similarity=0.159 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcch-HHH-----HHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHH
Q 017461 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT-VGL-----IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (371)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 176 (371)
+..+..+.++.++.++|..+++...|.+.++++.+.+. .++ +.++..++..++++++|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 34566778899999999999999999999999754422 222 246778999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccChhH--------HHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017461 177 VWWSIATALTPVAAKLGLPF--------LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (371)
Q Consensus 177 ~~~~i~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 248 (371)
++++++.+++++++ |++. ++++|+++|+|.|+.++...++++|++|+++||++.++...+..+|.++|+.
T Consensus 95 ~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 95 VIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred HHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 8764 8899999999999999999999999999999999999999888888888886
Q ss_pred hHHHHh--------cccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcC
Q 017461 249 FSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK 320 (371)
Q Consensus 249 ~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 320 (371)
+...+. ..+|||++|++.++++++ .+++....||+|.........++ .+.+...+.+..++++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 247 (490)
T PRK10642 173 VVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQ----GDREGLQDGPKVSFKEIATK 247 (490)
T ss_pred HHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhh----hccccccccccCCHHHHHHH
Confidence 665443 257999999997765554 33334456665442111000000 00000011123456666653
Q ss_pred -hhHH-HHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 321 -PPVW-ALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 321 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
++.+ ......++..+.++.+..|+|.|+++.+|++..+.+++..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~ 293 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIII 293 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 2322 2333344556778888999999998878998877665543
No 29
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.95 E-value=9.2e-26 Score=208.07 Aligned_cols=243 Identities=13% Similarity=0.099 Sum_probs=196.9
Q ss_pred CCCCCCCCccccCCh-hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh-hcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh
Q 017461 87 VDSESLVPWWEEFPK-RWFIVVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD 164 (371)
Q Consensus 87 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d 164 (371)
.++|++.-|.++.++ .++.+.+..++.++......+++++.+.+.+ ++|++.+|.+++.+++.+++.++.++.|++.|
T Consensus 16 w~pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~D 95 (462)
T PRK15034 16 WKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVP 95 (462)
T ss_pred CCCCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444334333332 4567777888888888888999999998876 89999999999999999999999999999999
Q ss_pred hhCCchhHHHHHHHHHHHHHHhhhh-----hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHH
Q 017461 165 TVGGKAVLGFGVVWWSIATALTPVA-----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGM 239 (371)
Q Consensus 165 r~Grr~~~~~~~~~~~i~~~~~~~~-----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~ 239 (371)
|+|.|+++.++.+++++..++.+++ + +++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....
T Consensus 96 r~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G 172 (462)
T PRK15034 96 IFGGRRWTVFSTAILIIPCVWLGIAVQNPNT--PFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLG 172 (462)
T ss_pred HhCChHHHHHHHHHHHHHHHHHHHHHcccCC--CHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHH
Confidence 9999999999999999999999987 6 899999999999998 6688999999999999999999999998777
Q ss_pred HHHHHHHHHhHHHHh-----c-------------ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhh
Q 017461 240 YLGSVTGLAFSPFLI-----H-------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVS 301 (371)
Q Consensus 240 ~~g~~~g~~~~~~l~-----~-------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (371)
++|..++++++..+. . ..+|+.++++.+++.++..++.+++.++.+..+.
T Consensus 173 ~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~~~------------ 240 (462)
T PRK15034 173 NLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASSRA------------ 240 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccc------------
Confidence 777776666554433 2 2347888888888877777777766554332110
Q ss_pred hccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 017461 302 SCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVS 352 (371)
Q Consensus 302 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (371)
........+|+|+.|.+++.+++.+.++.++.+++|.|+++.+
T Consensus 241 --------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~ 283 (462)
T PRK15034 241 --------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF 283 (462)
T ss_pred --------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0223456899999999999999999999999999999998865
No 30
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=1.5e-26 Score=224.31 Aligned_cols=261 Identities=15% Similarity=0.205 Sum_probs=206.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 107 VLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
+.+++..+...+.....+..++.++++|+++..+.|++.+.+.++++++.++.|++.||+|||+.+.+++++++++.+++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~ 115 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLL 115 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHH
Confidence 34445666666777888899999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhh-------------------------------------------------ccChhHHHHHHHHHHhhhhchhhhHHH
Q 017461 187 PVAA-------------------------------------------------KLGLPFLLVVRVFMGIGEGVAMPAMNN 217 (371)
Q Consensus 187 ~~~~-------------------------------------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~ 217 (371)
++.+ ...+..++++|+++|+|.+..++...+
T Consensus 116 alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~ 195 (633)
T TIGR00805 116 SLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGIS 195 (633)
T ss_pred hChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCch
Confidence 8763 002556788999999999999999999
Q ss_pred HHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc----------------------CchhHHHHHhHHHHHHHH
Q 017461 218 ILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF----------------------GWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 218 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~ 275 (371)
++.|++|+++|+++++++..+..+|.++|+++++++.+.+ +|+..|++.+++.++..+
T Consensus 196 ~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v 275 (633)
T TIGR00805 196 YIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI 275 (633)
T ss_pred hhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999987643 267778888888777766
Q ss_pred HHhhcccCCCCCCCCCChH-HHHHHhhh-ccCC-------CCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 276 VWLSKAHSSPAEDPQLRPA-EKKLIVSS-CASK-------EPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
+++++.++.|......+.+ ++.....+ .... .+.....++.++++|.++...+..++....++++.+|+|.
T Consensus 276 ~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~ 355 (633)
T TIGR00805 276 PFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPK 355 (633)
T ss_pred HHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555544433321111100 00000000 0000 0011234677999999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhhhee
Q 017461 347 YYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 347 ~l~~~~g~s~~~~~~~~~~~~ 367 (371)
|+++.+|+++.++++++....
T Consensus 356 yl~~~~g~s~~~ag~l~~~~~ 376 (633)
T TIGR00805 356 YLENQYGISSAEANFLIGVVN 376 (633)
T ss_pred HHHHHcCCcHHHHHHHhhhhh
Confidence 999999999999988876543
No 31
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.95 E-value=2.3e-26 Score=211.47 Aligned_cols=240 Identities=19% Similarity=0.257 Sum_probs=193.2
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh
Q 017461 111 SAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
+...+.....+.+++..|.+.+++|++..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~ 89 (377)
T TIGR00890 10 VIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD 89 (377)
T ss_pred HHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH
Confidence 33333334466788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHH
Q 017461 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 191 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 270 (371)
+++.++++|++.|++.+...+.....+.+++| ++|+++.++...+.++|..+++++.+.+.+..|||+.|++.+++.
T Consensus 90 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 90 --SLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIF 166 (377)
T ss_pred --HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 99999999999999999888888888999996 689999999999999999887777777777889999999999988
Q ss_pred HHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 017461 271 TVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 350 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (371)
++..++.+++.++++.+..+.+. +...+....+++++++.++...+..++..........+.+.|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (377)
T TIGR00890 167 LLVIVLGAFLIGYPPGQLIKTNI------------EVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS 234 (377)
T ss_pred HHHHHHHHHheecCchhccccCc------------ccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 88777766666554332111000 000112245678889999888777777766666666777777766
Q ss_pred hcCCChhhhhhhhhhe
Q 017461 351 VSSFGSKTLSETVQVC 366 (371)
Q Consensus 351 ~~g~s~~~~~~~~~~~ 366 (371)
+|++..+.+.+.+..
T Consensus 235 -~~~~~~~~~~~~~~~ 249 (377)
T TIGR00890 235 -LGLSDGFLVLAVSIS 249 (377)
T ss_pred -cCCCHHHHHHHHHHH
Confidence 688888777665544
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.95 E-value=7.2e-26 Score=212.13 Aligned_cols=259 Identities=15% Similarity=0.217 Sum_probs=198.9
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
+.++..+..+++..+..+++.....+..|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 14 RPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 45666778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+++.+++++++ +++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.++++.+.+.+.+..||
T Consensus 94 ~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999998999
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHH---HHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF---CHNWG 336 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~ 336 (371)
|+.|++.++..+ ..+......|+++....+ +.....+......+.....++++++++.++....... +....
T Consensus 172 ~~~f~i~~~~~~-~~~~~~~~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (426)
T PRK12307 172 RAAFFVGLLPVL-LVIYIRARAPESKEWEEA----KLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGA 246 (426)
T ss_pred HHHHHHHHHHHH-HHHHHHHHCCCChHHHHh----hhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 999987543322 222222222322111000 0000000000000111235677888888765443332 23334
Q ss_pred HHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 337 TFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 337 ~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
.+.+..++|.|+++ .|+++.+.+.+.+..
T Consensus 247 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~ 275 (426)
T PRK12307 247 NWPIFGLLPTYLAG-EGFDTGVVSNLMTAA 275 (426)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 44567789999988 599988888765543
No 33
>PRK03699 putative transporter; Provisional
Probab=99.95 E-value=1.3e-25 Score=208.17 Aligned_cols=245 Identities=15% Similarity=0.191 Sum_probs=199.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
.+++..+.+++..++.+......++.+|.+.+++|++.++.+++.+.+.+++.+++++.|++.||+|||+++.++.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~ 83 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMI 83 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34566667778888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-ccCc
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGW 259 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw 259 (371)
++.+++++++ +++.+++.|+++|++.+...+...+++.|++|+++|+.++++......+|..++|.+.+.+.. ..||
T Consensus 84 i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw 161 (394)
T PRK03699 84 LAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEW 161 (394)
T ss_pred HHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH
Confidence 9999999998 999999999999999998888899999999999999999999999999999999999888764 5799
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (371)
|+.|++.+++.++..++.++. +.|..+++.. ++ +++. .+. ..++.++...+..++....++.
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~~--~~p~~~~~~~--~~---------~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~ 223 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLFS--EFPALGKHAP--KA---------DKPV----AKE-KWGIGVLFLAIAALLYILAQLT 223 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--CCccccccCc--cc---------cCcc----ccc-cCChHHHHHHHHHHHHHHHHHH
Confidence 999999888777665544432 2121111100 00 0000 011 1246677777777777778888
Q ss_pred HHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 340 LLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 340 ~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
+..|+|.|+++.+|+++.+++.+.+.
T Consensus 224 ~~~~~p~~l~~~~g~s~~~~~~~~~~ 249 (394)
T PRK03699 224 FISWVPEYAQKKFGMSLEDAGNLVSN 249 (394)
T ss_pred HHHHHHHHHHHHcCCChHHhhHHHHH
Confidence 99999999988889999999887654
No 34
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.95 E-value=8.4e-26 Score=212.80 Aligned_cols=267 Identities=12% Similarity=0.134 Sum_probs=206.7
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHH
Q 017461 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV 176 (371)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~ 176 (371)
+...++|.++..+++...........++...|.+.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++++.
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~ 91 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGG 91 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhH
Confidence 44456788888888877766666667888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhccChhHHHH-HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 177 VWWSIATALTPVAAKLGLPFLLV-VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 177 ~~~~i~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
++.+++.+++++++ +++.+++ .|++.|++.+...+...+++.++++ ++|++++++...+..+|..++|++++.+.+
T Consensus 92 ~~~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 92 LLASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred HHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999998 8888865 4799999999877777888899995 899999999999999999999999999999
Q ss_pred ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHH---H-Hhhh--c--cCCCCcccchhhhhhcChhHHHHH
Q 017461 256 RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK---L-IVSS--C--ASKEPVKTIPWGLILSKPPVWALI 327 (371)
Q Consensus 256 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~--~--~~~~~~~~~~~~~l~~~~~~~~~~ 327 (371)
.+|||+.|++.+++.++..++.++..++.+.++....+.++. . ...+ . ..++..+..++ +++++|.++...
T Consensus 169 ~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 247 (455)
T TIGR00892 169 SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDF-SLFTHRGFLVYL 247 (455)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcch-HHhcCchHHHHH
Confidence 999999999999887766555444433322110000000000 0 0000 0 00000011122 478899999888
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 328 VSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
+..++...+++...++++.|+++ +|++..++++++++.++
T Consensus 248 ~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~ 287 (455)
T TIGR00892 248 SGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGF 287 (455)
T ss_pred HHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 88888888888888999999987 69999999988776543
No 35
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.94 E-value=4.7e-25 Score=204.47 Aligned_cols=245 Identities=16% Similarity=0.190 Sum_probs=202.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 181 (371)
.++.+.++.+..++..+......+.+|.+.+++|+++.+.+++.+++.++..+++++.|+++||+|||+++.++.++.++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~ 85 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFIL 85 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 34445555555556666777788889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchh
Q 017461 182 ATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (371)
Q Consensus 182 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 261 (371)
+.+++.+++ +++.+++.|++.|++.+...+....+..|.+++++++++.++...+..+|..++|.+++.+.+..|||+
T Consensus 86 ~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~ 163 (394)
T PRK11652 86 GTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRA 163 (394)
T ss_pred HHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHH
Confidence 999999988 999999999999999988888888899999999999999999999999999999999999999899999
Q ss_pred HHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 017461 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 341 (371)
.|++.+++.++..++..++.||++..++++ .+ ....++++++++.++...+..+........+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADARR--TR--------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFE 227 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCccccch--hH--------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999988877766665555566654322111 00 12356678889988877666666666667777
Q ss_pred HhhHHHHHHhcCCChhhhhhhhh
Q 017461 342 TWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 342 ~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
.+.+.++++.+|+++.+.+++..
T Consensus 228 ~~~~~~~~~~~g~~~~~~~~~~~ 250 (394)
T PRK11652 228 ACSGVLMGAVLGLSSMTVSILFI 250 (394)
T ss_pred HhChHHHHHHcCCCHHHHHHHHH
Confidence 78888998888999988887654
No 36
>PRK10504 putative transporter; Provisional
Probab=99.94 E-value=4.6e-25 Score=209.33 Aligned_cols=256 Identities=15% Similarity=0.197 Sum_probs=209.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
.+++++++.++..++.+.+.+..|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSL 90 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 34556667788888888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
++.+++ +++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..|||+.|+
T Consensus 91 ~~~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~ 168 (471)
T PRK10504 91 FCALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFL 168 (471)
T ss_pred HHHHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHH
Confidence 999988 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCCCCCChHHHH----------------H-----------------------HhhhccC
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKK----------------L-----------------------IVSSCAS 305 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~-----------------------~~~~~~~ 305 (371)
+.+.+..+..++.....|+.+....+.+..... . ..+++
T Consensus 169 ~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 246 (471)
T PRK10504 169 INIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHAR-- 246 (471)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHh--
Confidence 988777766666665555443322211110000 0 00011
Q ss_pred CCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 306 KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 306 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
..+.+..+. +++|+|.++...+..++..........+.|.|++..+|.++.++++++..
T Consensus 247 ~~~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 305 (471)
T PRK10504 247 NNNRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIP 305 (471)
T ss_pred cCCCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 111223344 37899999998888888888887788889999998789999999877654
No 37
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.2e-26 Score=212.08 Aligned_cols=263 Identities=19% Similarity=0.336 Sum_probs=221.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhh-hhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMS-IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS 180 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~ 180 (371)
.++++..++..++....+...++ ..+-.+.+|.+....+++.+.+++.++++++.+++|.+.||++-.+.+....++++
T Consensus 43 dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~ 122 (495)
T KOG2533|consen 43 DLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWG 122 (495)
T ss_pred HHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHH
Confidence 34555566666677777765554 33444779999999999999999999999999999999999998888888888888
Q ss_pred HHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh------
Q 017461 181 IATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI------ 254 (371)
Q Consensus 181 i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~------ 254 (371)
+..++..... |++.+++.|++.|+.+++.+|....+++.|+.+++|++.+|++.+...+|.++|.+++..+.
T Consensus 123 ~~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~ 200 (495)
T KOG2533|consen 123 LFGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG 200 (495)
T ss_pred HHHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC
Confidence 8888888888 99999999999999999999999999999999999999999999999999999999998863
Q ss_pred cccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhc------cCCCCcccchhhhhhcChhHHHHHH
Q 017461 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC------ASKEPVKTIPWGLILSKPPVWALIV 328 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (371)
...||||.|++.+++.++..+++++++|+.|.+..-..++|+....++. ...++.+...+++.+++|.+|..++
T Consensus 201 ~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l 280 (495)
T KOG2533|consen 201 GLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSL 280 (495)
T ss_pred CcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHH
Confidence 3579999999999999999999999999999876555555532221111 1112245678889999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 329 SHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
+.++.....+++.+|+|.|+.+..|++..++..+....
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~ 318 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPY 318 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchH
Confidence 99999999999999999999996679888888775543
No 38
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.94 E-value=1.6e-25 Score=210.38 Aligned_cols=264 Identities=14% Similarity=0.214 Sum_probs=202.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 181 (371)
++..+..+.+.+...+.+...+....|.+++ +|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~ 103 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAA 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHH
Confidence 4566666667777777777777777888776 599999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhc--cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh-cccC
Q 017461 182 ATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFG 258 (371)
Q Consensus 182 ~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~g 258 (371)
+.+++++.+. .+++.+++.|++.|++.+..++.....+.|++|+++|++++++++.+..+|..+++.+.+.+. ...|
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 183 (438)
T TIGR00712 104 VMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND 183 (438)
T ss_pred HHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh
Confidence 9888776521 167788899999999999988989999999999999999999999999999999988877544 4579
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHH-hhh--ccCCCC--cccchhhhhhcChhHHHHHHHHHHH
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI-VSS--CASKEP--VKTIPWGLILSKPPVWALIVSHFCH 333 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (371)
||+.|++.++++++..++.+++.+|++........++.+.. ..+ .+.+++ .+....+.++|++.+|...+..++.
T Consensus 184 w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (438)
T TIGR00712 184 WHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFV 263 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHH
Confidence 99999999988888777666666765543211110000000 000 000000 0011123468899999888888888
Q ss_pred HHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 334 NWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
....++..+++|.|+++.+|+++.+++++....
T Consensus 264 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~ 296 (438)
T TIGR00712 264 YLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLY 296 (438)
T ss_pred HHHHHHHHHhHHHHHHHccCCChhhHHHHHHHH
Confidence 888888999999999998899999888876544
No 39
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.94 E-value=2.8e-25 Score=204.79 Aligned_cols=235 Identities=16% Similarity=0.232 Sum_probs=198.6
Q ss_pred hhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHH
Q 017461 119 DRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 198 (371)
...++.+.+|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+++.+++ +++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--TIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHH
Confidence 345567889999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
++|++.|++.+...+...+++.|++++++|++++++......+|..++|.+++.+.+..|||+.|++.+++.++..++..
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999989999999998888877777666
Q ss_pred hcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhh
Q 017461 279 SKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKT 358 (371)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 358 (371)
++.+|++.++++.+.+. +....+++++++++.++...+..++...+.+.+..+.|.++.+.+|+++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 164 FFIPETLPKERRQPFHL------------RTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred HhCCccCcccccCCCCh------------HHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 66666433221110000 001234566888998888777777777777888888888888878999999
Q ss_pred hhhhhhhee
Q 017461 359 LSETVQVCT 367 (371)
Q Consensus 359 ~~~~~~~~~ 367 (371)
++.+....+
T Consensus 232 ~g~~~~~~~ 240 (377)
T PRK11102 232 FGYYFALNI 240 (377)
T ss_pred HHHHHHHHH
Confidence 988776543
No 40
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.94 E-value=8.4e-25 Score=202.66 Aligned_cols=242 Identities=18% Similarity=0.211 Sum_probs=197.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
...+..+..........+.+|.+.+++|.+..+.++..+.+.++..+++++.|+++||+|||+++.++.++.+++.+++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 7 CSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 44444555555556666889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
+++ +++.+++.|+++|++.+...+...+++.|++++++|+++.++......+|..++|.+++.+.+..||++.|++.+
T Consensus 87 ~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~ 164 (392)
T PRK10473 87 LAE--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMA 164 (392)
T ss_pred HhC--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHH
Confidence 998 999999999999999999899999999999999999999999999999999999999999888899999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
++.++..++.+...+|++.++.+.... .....++.++++.++...+...+.......+..+.|.+
T Consensus 165 ~~~~i~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (392)
T PRK10473 165 AMGILVLLLSLFILKETRPARAPAASS---------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVL 229 (392)
T ss_pred HHHHHHHHHHHHHcCCCCCcccCCccc---------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 888877777666666654322111000 01233456788888766666555555556667777888
Q ss_pred HHHhcCCChhhhhhhhhhe
Q 017461 348 YNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 348 l~~~~g~s~~~~~~~~~~~ 366 (371)
+++.+|+++.+.+.+.+..
T Consensus 230 ~~~~~g~~~~~~~~~~~~~ 248 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALT 248 (392)
T ss_pred HHHHcCCCHHHHHHHHHHH
Confidence 8887899998888766543
No 41
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.94 E-value=4e-25 Score=202.83 Aligned_cols=254 Identities=13% Similarity=0.148 Sum_probs=193.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
..++..++.......+.+..|. +++++|++..+.+++.+++.+++++++++.|+++||+|||+.+.++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~ 84 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWA 84 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 4555666666777788899995 999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc----------c
Q 017461 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------R 256 (371)
Q Consensus 187 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~ 256 (371)
++++. +++.+++.|+++|++.+ ..+...++++|++|+++|++++++...+.++|..+++.+++.+.. .
T Consensus 85 ~~~~~-~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~ 162 (366)
T TIGR00886 85 GLAVQ-SYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAH 162 (366)
T ss_pred HHHhh-hHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 88753 68889999999999965 456678899999999999999999998888888888877776654 2
Q ss_pred cCchhHH-HHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHH
Q 017461 257 FGWPSVF-YSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (371)
Q Consensus 257 ~gw~~~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (371)
.+||+.| +..+++.++..++.+...++.+..+++..+.+.. ......++.......+++++++++...+..++...
T Consensus 163 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (366)
T TIGR00886 163 LAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFK---GARWSVGTGALGDQLKVFRDRHTWILALLYSVTFG 239 (366)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccc---cccccccchhHHHHHHHHhccchhhHHHHHHHHHH
Confidence 4899999 4445555555555555555544322111100000 00000000111145668889999988888888877
Q ss_pred HHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 336 GTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 336 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
..+.+..++|.|+++.+|+++.+++.+....
T Consensus 240 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 270 (366)
T TIGR00886 240 SFLGVSSIFAMFFKDQFGLSKVTAGAYASLG 270 (366)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 8888899999999998999999998766543
No 42
>PRK10133 L-fucose transporter; Provisional
Probab=99.94 E-value=1.4e-24 Score=203.22 Aligned_cols=251 Identities=17% Similarity=0.220 Sum_probs=192.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 181 (371)
....+..+++.+++..+......+..|.+++++|+++.+.+++.+.+.+++.+++++.|++.||+|||+++.++.+++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~ 103 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYAL 103 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 44455666677777788888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHh---hhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-c-
Q 017461 182 ATALT---PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-R- 256 (371)
Q Consensus 182 ~~~~~---~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~- 256 (371)
+.+++ .+++ +++.++++|+++|+|.|...+..++++.|+.++++|+..+++.+..+.+|..+++.+++.+.. .
T Consensus 104 ~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~ 181 (438)
T PRK10133 104 GAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNV 181 (438)
T ss_pred HHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99876 4567 999999999999999999999999999998877777778999999999999999999876541 0
Q ss_pred ------------------------cCchhHHHHHhHHHH-HHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCccc
Q 017461 257 ------------------------FGWPSVFYSFGSLGT-VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKT 311 (371)
Q Consensus 257 ------------------------~gw~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (371)
.+||++|+..+.+.. +..++.....|+.+.+++. + + +.....
T Consensus 182 ~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~--~-~----------~~~~~~ 248 (438)
T PRK10133 182 PHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHS--D-A----------KQGSFS 248 (438)
T ss_pred cccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccc--c-c----------cccchh
Confidence 245666654343333 3222222323332111000 0 0 000112
Q ss_pred chhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH-HHhcCCChhhhhhhhhhee
Q 017461 312 IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY-NQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 312 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~g~s~~~~~~~~~~~~ 367 (371)
...++++++|.++...+..++.....++...|++.|+ ++.+|+++.++++.+....
T Consensus 249 ~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~ 305 (438)
T PRK10133 249 ASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM 305 (438)
T ss_pred hhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Confidence 3456788999998877777887788888888899885 5668999999998766543
No 43
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=3.9e-25 Score=195.13 Aligned_cols=250 Identities=16% Similarity=0.163 Sum_probs=218.7
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
+.+.+.+.+..+...+......+++++.+.+.+++|+|+.|.+++.++..+...+..++.|.+.||||.|++..++.++.
T Consensus 10 ~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~ 89 (417)
T COG2223 10 RIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLL 89 (417)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHH
Confidence 34556677777777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc-ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 180 SIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 180 ~i~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.+-++..+++... ++|++++++++.|++ |..+....+.++++||++++|.++|++. ..|+|..+..+++..+....|
T Consensus 90 ~IP~~~~~~a~~~~~~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 90 LIPCLGLAFAVTYPSTWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHHHHccCCchHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 9999999998732 456999999999999 5567899999999999999999999999 999999999999999998888
Q ss_pred ---chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHH
Q 017461 259 ---WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (371)
Q Consensus 259 ---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (371)
|+.+..+..+..++..++.++...|.+..+...++.. ...++.++++++.|.+++.++..+.
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~---------------~~~~~~v~~~~~~W~lsllY~~tFG 232 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL---------------PAQLKAVFSNKDTWLLSLLYFATFG 232 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc---------------hhHHHHHhcCcchHHHHHHHHHHHH
Confidence 9999999999988888998888888776432222111 1345678899999999999999999
Q ss_pred HHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 336 GTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 336 ~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
++.++..++|.|+++.+|.++.++|.+...+
T Consensus 233 ~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f 263 (417)
T COG2223 233 GFVGFSAYLPMYLVTQFGLSPVTAGLIAFLF 263 (417)
T ss_pred HHHHHHHHHHHHHHHhcCCChhhHHHHHHHH
Confidence 9999999999999999999999998776544
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.94 E-value=1.3e-24 Score=198.97 Aligned_cols=247 Identities=15% Similarity=0.098 Sum_probs=197.2
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh
Q 017461 110 FSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (371)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 189 (371)
++..++..+......+.+|.+..+++.+..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.++..++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHH
Confidence 44556666667777888889999999999999999999999999999999999999999999999999988888777665
Q ss_pred hc---cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHH
Q 017461 190 AK---LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (371)
Q Consensus 190 ~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~ 266 (371)
.. .+++.++++|++.|++.+...+...+++.|++|+++|++++++...+..+|.++||.+++.+.+..|||+.|++.
T Consensus 85 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~ 164 (365)
T TIGR00900 85 ALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVD 164 (365)
T ss_pred HHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 41 268999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHhhcc-cCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHH-Hhh
Q 017461 267 GSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL-TWM 344 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 344 (371)
++..++..++.+... ++++..+.+..+++.. ++....++.++|+|.++...+..++......... .+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (365)
T TIGR00900 165 AVGFAISALLIVSVRIPELAASEIQALSNAVL----------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALF 234 (365)
T ss_pred HHHHHHHHHHHHhcccccCCCccccccchhHH----------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776665554444332 2222111111000000 0012346678889999888888887777776666 888
Q ss_pred HHHHHHhcCCChhhhhhhhhhe
Q 017461 345 PTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 345 ~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
|.|.++.+|++..+.+.+....
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~ 256 (365)
T TIGR00900 235 PYVQSKYLGRGSTHYGWVLAAF 256 (365)
T ss_pred HHHHHHHhCCchHHHHHHHHHH
Confidence 9999887899999988776554
No 45
>PRK11043 putative transporter; Provisional
Probab=99.94 E-value=2.5e-24 Score=200.13 Aligned_cols=231 Identities=18% Similarity=0.218 Sum_probs=192.3
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 192 (371)
.++..+...++.+..|.+.+++|.++.+.+++.+++.++..++++++|+++||+|||+++.++.++.+++.+++.+++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~-- 92 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE-- 92 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--
Confidence 444445566777888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
+++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+.+|||+.|++.+++.++
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~ 172 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLL 172 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Confidence 99999999999999988888888899999999999999999999999999999999999999999999999998888777
Q ss_pred HHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 017461 273 WFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVS 352 (371)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (371)
..++.++..++++. +++ + .+..+++++++++.++...+...+....++.+..+.|.++++ +
T Consensus 173 ~~~~~~~~~~~~~~-~~~--~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~ 233 (401)
T PRK11043 173 LILPTLRLKPSKKA-RKQ--S---------------QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-M 233 (401)
T ss_pred HHHHHHHcCCCCCc-ccc--c---------------hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-c
Confidence 66665544333221 110 0 012356778889988877666666666777788889999877 7
Q ss_pred CCChhhhhhhhh
Q 017461 353 SFGSKTLSETVQ 364 (371)
Q Consensus 353 g~s~~~~~~~~~ 364 (371)
|+++.++++...
T Consensus 234 g~s~~~~g~~~~ 245 (401)
T PRK11043 234 GYSPADIGLSYV 245 (401)
T ss_pred CCCHHHHHHHHH
Confidence 999998887543
No 46
>TIGR00895 2A0115 benzoate transport.
Probab=99.94 E-value=3.5e-25 Score=205.20 Aligned_cols=264 Identities=23% Similarity=0.388 Sum_probs=203.0
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
+++|..+..+++..+..+++........|.+.+++|.+..+.+++.+++.++..++.++.|+++||+|||+++.++.++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 13 RYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 44566777777777888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+++.+++.+++ +++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..||
T Consensus 93 ~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALAT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHcc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 99999999998 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHH----hhh----c---cCCC----CcccchhhhhhcC---h
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLI----VSS----C---ASKE----PVKTIPWGLILSK---P 321 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~---~~~~----~~~~~~~~~l~~~---~ 321 (371)
++.|++.+++.++..++.+.+.|+++....+.++++.... ..+ . ..++ +.....++.++++ +
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTAR 250 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHH
Confidence 9999998777777666666666765442211111110000 000 0 0000 0011112223332 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 322 PVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
..+.+.+..++....++....++|.+..+ +|+++.+++.+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~ 294 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLPKLMVE-LGFSLSLAATGGALF 294 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHH
Confidence 34444555556666777788888855554 799998888776544
No 47
>PRK15075 citrate-proton symporter; Provisional
Probab=99.93 E-value=2.3e-24 Score=202.21 Aligned_cols=247 Identities=12% Similarity=0.108 Sum_probs=181.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHH-HHHH-----HHHHHHHHHHHHHhhhhhCCchhHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI-QSSF-----FWGYLLTQIAGGIWADTVGGKAVLGFG 175 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~-----~~~~~~~~~~~g~l~dr~Grr~~~~~~ 175 (371)
|++....++++.++.++|...++...|.+.++++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 13 KARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 4557888899999999999999999999999999888776543 3322 222346889999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccChh--------HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017461 176 VVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (371)
Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (371)
.++++++.+++++++ +++ .++++|+++|++.+...+....+++|++|+++|++++++...+..+|..+++
T Consensus 93 ~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 93 LSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 876 4688999999999999999999999999999999999999999888888888
Q ss_pred HhHHHHh--------cccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhc
Q 017461 248 AFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS 319 (371)
Q Consensus 248 ~~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (371)
.+++.+. +.+|||++|++..+... .........||.+ +...+ +. + ......++...+
T Consensus 171 ~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~-~~~~~~~~~~e~~-------~~~~~----~~--~-~~~~~~~~~~~~ 235 (434)
T PRK15075 171 LLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVP-FIFLIRRSLEETE-------EFLAR----KH--R-PSMREIFRSLAA 235 (434)
T ss_pred HHHHHHHHhCCHHHHhccchHHHHHHHHHHHH-HHHHHHHhcCCCH-------HHHHh----hh--c-cccccHHHHHHH
Confidence 8877763 46899999987543321 1111111112110 00000 00 0 011122344455
Q ss_pred ChhHHHH-HHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 320 KPPVWAL-IVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 320 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
+++.+.. .+..++....++....|.|.|+++.+|++..+++++...
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~ 282 (434)
T PRK15075 236 NWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLC 282 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 5555543 333444566677888999999998889998887766543
No 48
>PRK09952 shikimate transporter; Provisional
Probab=99.93 E-value=1e-23 Score=197.80 Aligned_cols=245 Identities=17% Similarity=0.192 Sum_probs=181.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhc--CCCcchHHHHH-----HHHHHHHHHHHHHHHHhhhhhCCchhH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEF--NWNPATVGLIQ-----SSFFWGYLLTQIAGGIWADTVGGKAVL 172 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~~ 172 (371)
+++..+...+++.+.++++...++.+.|. +.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34557778888999999999999888775 56665 66665 45553 344566778999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccChh--------HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHH
Q 017461 173 GFGVVWWSIATALTPVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV 244 (371)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~ 244 (371)
.++.++++++.+++++++ +++ .++++|+++|++.|+.++....++.|++|+++|++..+....+..+|.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~ 175 (438)
T PRK09952 98 MLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLL 175 (438)
T ss_pred HHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence 999999999999999999 876 5888999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHhc--------ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhh
Q 017461 245 TGLAFSPFLIH--------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGL 316 (371)
Q Consensus 245 ~g~~~~~~l~~--------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (371)
++..+...+.. .+|||++|++.+++.++. +......||+++.. +.. .+.+ +.+.+....+.
T Consensus 176 l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~------~~~---~~~~-~~~~~~~~~~~ 244 (438)
T PRK09952 176 LSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFE------QQQ---HEQA-AAKKRIPVIEA 244 (438)
T ss_pred HHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHH------HHH---hhcc-cccccCCHHHH
Confidence 98877776552 479999999877665432 22222334433210 000 0000 00001112334
Q ss_pred hhcChhHHHHHH-HHHHHHHHHHHHHHhhHHHHHHhcCCChhhh
Q 017461 317 ILSKPPVWALIV-SHFCHNWGTFILLTWMPTYYNQVSSFGSKTL 359 (371)
Q Consensus 317 l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~ 359 (371)
++++++.+...+ ..++..+..+....|.|.|+++.+|++....
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~ 288 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELF 288 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 667777765544 4555666778888999999988889888744
No 49
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=4.4e-24 Score=203.10 Aligned_cols=186 Identities=17% Similarity=0.250 Sum_probs=159.2
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhc--------CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF--------NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV 171 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 171 (371)
+...+.++++.++.+..+++...+++..+.+++++ +.+..+.+++.+++.++..++++++|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 8 SYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred hHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 34566677777888999999999999999888887 8888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh---------hc-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHH
Q 017461 172 LGFGVVWWSIATALTPVA---------AK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL 241 (371)
Q Consensus 172 ~~~~~~~~~i~~~~~~~~---------~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 241 (371)
++++.++++++.++++++ ++ ..++.++++|+++|++.|+..+...++++|++|+++|++++++.+.+..+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999998887763 10 03567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHh--------cccCchhHHHHHhHHHHHHHHHHhhcccCCCC
Q 017461 242 GSVTGLAFSPFLI--------HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 242 g~~~g~~~~~~l~--------~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
|.++++.+++.+. +..|||++|++.+++.++..++ .++.||+++
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~ 219 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPR 219 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcH
Confidence 9999988876554 3569999999988777766544 455677664
No 50
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.93 E-value=1.2e-23 Score=195.34 Aligned_cols=240 Identities=13% Similarity=0.136 Sum_probs=181.9
Q ss_pred HHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh---h
Q 017461 112 AFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---V 188 (371)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~ 188 (371)
+.++...........++.+.+++|++..+.+++.+.+.++..+++++.|++.||+|||+++..+.++.+++.+++. +
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~ 100 (402)
T TIGR00897 21 GVVVFMTGDGLEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGL 100 (402)
T ss_pred HHHHHHHhhhhHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3333333333344456667788999999999999999999999999999999999999999999999998876653 2
Q ss_pred -hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHH-HHHHHhHHHHhcccCchhHHHHH
Q 017461 189 -AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS-VTGLAFSPFLIHRFGWPSVFYSF 266 (371)
Q Consensus 189 -~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~~~~~l~~~~gw~~~f~~~ 266 (371)
.. +++.+++.|++.|+|.+...+...+.+.+++|+++|++++|+...+.++|. +++|.+++.+.+..||+..+|..
T Consensus 101 ~~~--~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~ 178 (402)
T TIGR00897 101 GHA--NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSA 178 (402)
T ss_pred cCc--cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 24 788889999999999888878888889999999999999999999999996 68999999999888977666655
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
....++..++.++..++.+.++... +++ +..+....++.++|+|.++...+..++.....+.+.+++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 247 (402)
T TIGR00897 179 LAFVLTGGVIALFSNKDIFTPQHMQ-TRE----------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPM 247 (402)
T ss_pred HHHHHHHHHHHHhccCCCCCccccc-CCc----------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433344444444432211110 000 00011224567889999998888888888888999999999
Q ss_pred HHHHhcCCChhhhhhhhhh
Q 017461 347 YYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 347 ~l~~~~g~s~~~~~~~~~~ 365 (371)
|+++ +|+++.+.+.+...
T Consensus 248 ~~~~-~g~s~~~~~~~~~~ 265 (402)
T TIGR00897 248 FVAE-LGFSTSEWLQIWGT 265 (402)
T ss_pred HHHH-cCCChhHHHHHHHH
Confidence 9877 79999988776544
No 51
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.92 E-value=1.7e-23 Score=193.53 Aligned_cols=244 Identities=11% Similarity=0.037 Sum_probs=184.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 188 (371)
.+++.++..+.........+.+.++++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.++.+++.+++.+
T Consensus 8 l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 8 IMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHH
Confidence 34555555555455555566678899999999999999999999999999999999999999999999999999988877
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
+. +. ++.|+++|++.+...|+..+++.|++|+++|++++++.+....+|.++||.++|.+.+. .|+..+.+.+.
T Consensus 88 ~~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~ 161 (393)
T PRK11195 88 GI--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCAL 161 (393)
T ss_pred HH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 77 54 78899999999999999999999999999999999999999999999999999999885 47777776655
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 017461 269 LGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (371)
+.++. ++..+..|+.+.+++..+.+..... .+ ....++.++++|.+.......++.........+.++.|+
T Consensus 162 ~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (393)
T PRK11195 162 IYLLA-ALFNLFIPRLGARRPGQSWNPIALL-RD-------FFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWA 232 (393)
T ss_pred HHHHH-HHHHhcCCCCcccccccCCCHHHHH-HH-------HHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44333 3334455654432211111000000 00 012245678888877665555555555666677778888
Q ss_pred HHhcCCChhhhhhhhhhee
Q 017461 349 NQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 349 ~~~~g~s~~~~~~~~~~~~ 367 (371)
++.+|+++.+.|++....+
T Consensus 233 ~~~lg~s~~~~G~~~~~~~ 251 (393)
T PRK11195 233 PVALGITLNQPAYLQAVVA 251 (393)
T ss_pred HHHcCCChhHHHHHHHHHH
Confidence 8889999999998877544
No 52
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.92 E-value=2.3e-24 Score=204.43 Aligned_cols=185 Identities=24% Similarity=0.259 Sum_probs=156.1
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCC--------cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWN--------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV 171 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~ 171 (371)
++.+...+++.++.++..++...+....+.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~ 103 (481)
T TIGR00879 24 WKVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKS 103 (481)
T ss_pred HHHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHH
Confidence 34455555566666777788888888899888888777 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhc-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhH
Q 017461 172 LGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (371)
Q Consensus 172 ~~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (371)
++++.++++++.+++.+... .+++.++++|+++|+|.+...+...++++|++|+++|++++++...+..+|.++++.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 104 LLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999998866541 14568999999999999999999999999999999999999999999999999999999
Q ss_pred ---HHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 251 ---PFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 251 ---~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
+.+.+..|||+.|++.++..++. ++..++.+|++
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~-~~~~~~l~~~~ 220 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLL-FLGLFFLPESP 220 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHH-HHHHhcCCCCh
Confidence 66667789999999966555444 34445556654
No 53
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.92 E-value=1.1e-23 Score=201.23 Aligned_cols=168 Identities=18% Similarity=0.319 Sum_probs=157.8
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
+++|..+..++++.++..++....++..|.+.+++|++..+.+++.+.+.+++.++.++.|+++||+|||++++++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 16 RAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+++.+++++++ +++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.+||
T Consensus 96 ~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFAP--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhHH
Q 017461 260 PSVFYSFGSL 269 (371)
Q Consensus 260 ~~~f~~~~~~ 269 (371)
|+.|++.++.
T Consensus 174 ~~~f~~~~~~ 183 (496)
T PRK03893 174 RALFFIGILP 183 (496)
T ss_pred HHHHHHHHHH
Confidence 9999875443
No 54
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.92 E-value=3.1e-23 Score=191.42 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
+..++++.++.........+.+|.+.+++|.+..+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~ 87 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAG 87 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677777888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
+++++ +++.++++|+++|++.+...+...+.+.+..++++|+++++++..+.++|..+|+.+++.+.+...|...+ .
T Consensus 88 ~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~-~ 164 (381)
T PRK03633 88 LGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPW-V 164 (381)
T ss_pred HHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHH-H
Confidence 99999 99999999999999999988888888889999999999999999999999999999999987754443333 3
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
.+.+......+.+...++ ...++ + +..+++++++++.++......++....+.....++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~--~~~~~----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp 224 (381)
T PRK03633 165 TGLVLAAILPLLFTRILN--QQAEN----------------H--DSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMP 224 (381)
T ss_pred HHHHHHHHHHHHHhcccC--CCCCC----------------C--CCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 232222222222211111 11000 0 012345577888887665555555556666778899
Q ss_pred HHHHHhcCCChhhhhhhhhhe
Q 017461 346 TYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 346 ~~l~~~~g~s~~~~~~~~~~~ 366 (371)
.|+++ .|.++.+++.+.+..
T Consensus 225 ~~~~~-~g~s~~~~g~~~~~~ 244 (381)
T PRK03633 225 LYLNH-QGMSDASIGFWMALL 244 (381)
T ss_pred HHHHH-cCCCHHHHHHHHHHH
Confidence 99987 699999888766543
No 55
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=4e-23 Score=190.16 Aligned_cols=235 Identities=15% Similarity=0.083 Sum_probs=185.4
Q ss_pred HHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHH-HHHHHHHHHHHhhhh
Q 017461 112 AFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF-GVVWWSIATALTPVA 189 (371)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~ 189 (371)
.++...+......+.+|. +.+++|.+..+.|++.+++.++..+.+++.|+++||+|||+.+++ +.++.+++.++++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~ 84 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWN 84 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhc
Confidence 455666666777787776 578999999999999999999999999999999999999887654 566667777888888
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHH--HHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS--LALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
+ +++.+++.|++.|.+.+...+...+++.|+.++++|+.. .++...+.++|.++||.+++.+.+..|||+.|++.+
T Consensus 85 ~--~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~ 162 (375)
T TIGR00899 85 R--NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAA 162 (375)
T ss_pred c--hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHH
Confidence 8 999999999999988888888888899999887777654 578888889999999999999999899999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
++.++..++.+++.||.+.+.++... ..+.++.++++.++...+..++..........++|.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (375)
T TIGR00899 163 LAFVLCGVLVWLFLPSYPRGAPGALT-----------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLL 225 (375)
T ss_pred HHHHHHHHHHHHhCCCcccCcccccC-----------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 88777777766666765432211100 1123346777877766666666666566667788999
Q ss_pred HHHhcCCChhhhhhhhhh
Q 017461 348 YNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 348 l~~~~g~s~~~~~~~~~~ 365 (371)
+++.+|.++.+++.+...
T Consensus 226 ~~~~~g~~~~~~g~~~~~ 243 (375)
T TIGR00899 226 IIHELGLPDKLAGLMMGT 243 (375)
T ss_pred HHHHcCCCHHHHHHHHHH
Confidence 988889999988877544
No 56
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.92 E-value=3e-23 Score=192.45 Aligned_cols=232 Identities=14% Similarity=0.121 Sum_probs=183.6
Q ss_pred HHHHHhhhhhhhhhhh-hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc
Q 017461 113 FLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK 191 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 191 (371)
.++.........++++ .+++++|++..++|++.+.+.++..+.+++.|+++||+|||+++.++.++.+++.+++.+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~- 97 (400)
T PRK11646 19 NMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAH- 97 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhc-
Confidence 3333334444444444 47889999999999999999999999999999999999999999999999999999999998
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHH
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~ 271 (371)
++|.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+. ..||++.|++.+++.+
T Consensus 98 -~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~ 175 (400)
T PRK11646 98 -EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFV 175 (400)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHH
Confidence 99999999999999998888999999999999999999999999999999999999999998 6899999999888777
Q ss_pred HHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 017461 272 VWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 351 (371)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (371)
+..++..+..|+.+..+ . .. ....+++++++++.++...+..+...........++|.|+++.
T Consensus 176 ~~~i~~~~~~~~~~~~~-~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 238 (400)
T PRK11646 176 LAAAFNAWLLPAYKLST-V--RT--------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI 238 (400)
T ss_pred HHHHHHHHhCCcccccc-c--ch--------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 66655555444421110 0 00 0122466788888888666655555544445567889999885
Q ss_pred cCCChhhhhhhhhh
Q 017461 352 SSFGSKTLSETVQV 365 (371)
Q Consensus 352 ~g~s~~~~~~~~~~ 365 (371)
+.++.+.+++.+.
T Consensus 239 -~~~~~~~g~l~~~ 251 (400)
T PRK11646 239 -AGSPSAVKWMYAI 251 (400)
T ss_pred -cCCchHHHHHHHH
Confidence 4467777766544
No 57
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.92 E-value=4.2e-23 Score=197.13 Aligned_cols=256 Identities=15% Similarity=0.139 Sum_probs=190.0
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhc-----CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhH
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF-----NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL 172 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 172 (371)
-.+.++.++.++.++.+..+++...++...|.+.+++ +.+..+.+++.+.+.++..++++++|+++||+|||+++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~ 89 (502)
T TIGR00887 10 FGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVY 89 (502)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 3556777888899999999999999999888877653 34566789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccC------hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHH
Q 017461 173 GFGVVWWSIATALTPVAAKLG------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (371)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (371)
.++.+++.++.+++++++ + ++.++++|++.|++.|...+....+++|++|+++|++++++......+|.+++
T Consensus 90 ~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g 167 (502)
T TIGR00887 90 GMELIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAG 167 (502)
T ss_pred HHHHHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988886 5 78899999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHhc-----------------------ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCC--CCCChH-HHHHHh
Q 017461 247 LAFSPFLIH-----------------------RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED--PQLRPA-EKKLIV 300 (371)
Q Consensus 247 ~~~~~~l~~-----------------------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~ 300 (371)
+.++..+.. ..+||++|.+.++.+++. ++..++.||+|+.. +.+.++ ..+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~-~~~~~~lpESpr~l~~~~~~~~~a~~~~~ 246 (502)
T TIGR00887 168 AIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLA-LYFRLTIPETPRYTADVAKDVEQAASDMS 246 (502)
T ss_pred HHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHhCcchHHHHHHHH
Confidence 988876532 247999998776665544 44456779988742 111111 111000
Q ss_pred ---h-----hccC------CCCcccchhhhhhcC---hhH----HHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChh
Q 017461 301 ---S-----SCAS------KEPVKTIPWGLILSK---PPV----WALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSK 357 (371)
Q Consensus 301 ---~-----~~~~------~~~~~~~~~~~l~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 357 (371)
+ +.++ +++....++++++++ ++. +...+.+++..+.+++...|.|.++++ .|++..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~ 323 (502)
T TIGR00887 247 AVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPP 323 (502)
T ss_pred HHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCC
Confidence 0 0000 000011357777653 222 112233444455667777888999976 588654
No 58
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.92 E-value=7.8e-23 Score=189.80 Aligned_cols=230 Identities=17% Similarity=0.193 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
+..+++.+++.++.....+++.|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++.++.++++++.++
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44566667777778888889999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhhh-ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc--------
Q 017461 186 TPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------- 256 (371)
Q Consensus 186 ~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 256 (371)
+..+. ..+++.+++.|++.|+|.|...+..++++.+..|+++|++.+++.+...++|..+||.+++.+...
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~ 164 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQD 164 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhh
Confidence 65432 117999999999999999999999999999999999999999999999999999999999877422
Q ss_pred ------------------cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhh
Q 017461 257 ------------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLIL 318 (371)
Q Consensus 257 ------------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 318 (371)
.+||++|++.+++.++..++..+. +.++.++.+ + + + .......++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~~p~~~~~~--~-~----------~-~~~~~~~~~~~ 229 (410)
T TIGR00885 165 VLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLT-KMPALNHSD--A-K----------Q-ISFSASLSRLA 229 (410)
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCccc--c-c----------c-ccchhhHHHHH
Confidence 369999999888777665544322 211111100 0 0 0 00112345688
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 017461 319 SKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 350 (371)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (371)
|+|.++...+..+++........++++.|.++
T Consensus 230 ~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~ 261 (410)
T TIGR00885 230 RIRHYREGVIAQFFYVGVQIMCWTFIIQYAVR 261 (410)
T ss_pred hChhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999988888888888888888999999976
No 59
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=8.9e-23 Score=188.94 Aligned_cols=238 Identities=12% Similarity=0.133 Sum_probs=186.7
Q ss_pred HHHHHHHhhhhhhhhhhh-hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh
Q 017461 111 SAFLLCNMDRVNMSIAIL-PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (371)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 189 (371)
+..++.........+.++ .+.+++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++..++
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Confidence 344445555556666555 4678899999999999999999999999999999999999999999999999999999999
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHH
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 269 (371)
+ +++.++++|++.|.+.+...+...++..|.+++++|++++++.....++|.++||++++.+.+ .||+.+|++.+++
T Consensus 94 ~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~ 170 (395)
T PRK10054 94 N--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAIC 170 (395)
T ss_pred h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHH
Confidence 9 899999999999988888888899999999999999999999999999999999999999885 7999999988887
Q ss_pred HHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 017461 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (371)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (371)
.++..++..++.++.+.++++.. ++ ....++++|+|.++...+..++..+....+..+.+.|+.
T Consensus 171 ~~i~~i~~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 234 (395)
T PRK10054 171 SAFPLVFIQIWVQRSEKAIATET--GS--------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVM 234 (395)
T ss_pred HHHHHHHHHHHHhccccccccch--hh--------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 77765555554544332211100 00 112256788999988888877777777666667777775
Q ss_pred Hh--cCCChhhhhhhhhhee
Q 017461 350 QV--SSFGSKTLSETVQVCT 367 (371)
Q Consensus 350 ~~--~g~s~~~~~~~~~~~~ 367 (371)
.. .+.+....+.++...+
T Consensus 235 ~~~~~~~~~~~~g~~~~~~~ 254 (395)
T PRK10054 235 VVADSDFAEKVVAVVLPVNA 254 (395)
T ss_pred HhcccchHHHHHHHHHHhhh
Confidence 43 3556666666655543
No 60
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.91 E-value=5.8e-23 Score=187.78 Aligned_cols=225 Identities=11% Similarity=0.133 Sum_probs=181.2
Q ss_pred hhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHH
Q 017461 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 199 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 199 (371)
....++.+|.+.+++|++..+.+++.+++.++..++.++.|+++||+|||+++.++.++.+++.+.+ ..+ +.+.+++
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--~~~~l~~ 92 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--GTALLFA 92 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--cHHHHHH
Confidence 3556789999999999999999999999999999999999999999999999999999988888877 677 8999999
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc--CchhHHHHHhHHHHHHHHHH
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~~~~ 277 (371)
.|++.|++.+...+....++.|+++ ++|+++++++..+.++|..+++.+++.+.+.. +||+.|.+.+++.++..+.
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~- 170 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLA- 170 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH-
Confidence 9999999999888888889999995 68999999999999999999999999887764 3999988776654433222
Q ss_pred hhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChh
Q 017461 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSK 357 (371)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 357 (371)
+.++.+.++++. ++......++++|+|.++...+..++....++....++|.|+++ +|++..
T Consensus 171 --~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~ 232 (355)
T TIGR00896 171 --WIPQVRRRVAAN---------------QTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAA 232 (355)
T ss_pred --HhhhhccccCCC---------------CCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence 223221111100 00001234567889999888777777778888889999999987 699999
Q ss_pred hhhhhhhhee
Q 017461 358 TLSETVQVCT 367 (371)
Q Consensus 358 ~~~~~~~~~~ 367 (371)
+++.+.+..+
T Consensus 233 ~~g~~~~~~~ 242 (355)
T TIGR00896 233 TAGSLLALMQ 242 (355)
T ss_pred HHHHHHHHHH
Confidence 9888876644
No 61
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=6.6e-23 Score=192.66 Aligned_cols=267 Identities=18% Similarity=0.241 Sum_probs=222.0
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHH
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVV 177 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~ 177 (371)
...+.|.+++..++..+........++.+.+.+.++++-+..+++|+.++......+..|+.+.+.||||.|.+.++|.+
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~ 119 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGL 119 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHH
Confidence 56678889888888888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccChhHHHHH-HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Q 017461 178 WWSIATALTPVAAKLGLPFLLVV-RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 178 ~~~i~~~~~~~~~~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (371)
+.++|.++.++++ ++|++++. .++.|+|.|..+.....++..+| +++|+.+.|+...+.++|.++-|.+..++.+.
T Consensus 120 v~~~g~~lssF~~--~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~ 196 (509)
T KOG2504|consen 120 VAALGLLLSSFAT--SLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLSK 196 (509)
T ss_pred HHHHHHHHHHHHh--hHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHHH
Confidence 9999999999999 99888887 78999999999999999999998 78999999999999999999999999999999
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCC-----------------------------CCh----HHHHHHhhhc
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-----------------------------LRP----AEKKLIVSSC 303 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~----~~~~~~~~~~ 303 (371)
+|||+.+++.+.+.+-.++......|..+...+. ... .+......+.
T Consensus 197 ~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (509)
T KOG2504|consen 197 YGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPD 276 (509)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCc
Confidence 9999999999999887777777766633222111 000 0000000000
Q ss_pred cCC-CCcccchh---hhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 304 ASK-EPVKTIPW---GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 304 ~~~-~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
+.. ........ .++++++.|+.+.+...+..++++....++|.|..+ +|++..+++.+++++++
T Consensus 277 ~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi 344 (509)
T KOG2504|consen 277 KWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGV 344 (509)
T ss_pred cccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHH
Confidence 000 01111111 468999999999999999999999999999999996 79999999999988765
No 62
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.91 E-value=1.8e-22 Score=187.45 Aligned_cols=170 Identities=20% Similarity=0.192 Sum_probs=146.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 182 (371)
+.+..+.+..++..++..+..+.+|. +.+++|.+..+.|++.+++.+++.+++++.|+++||+|||+++.++.++++++
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~ 94 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALS 94 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHH
Confidence 34445666667777777778888887 67899999999999999999999999999999999999999999999998887
Q ss_pred HHHhhhhhc------cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Q 017461 183 TALTPVAAK------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 183 ~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (371)
.+++.++.. .+++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|.++|+.+++.+.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~ 174 (399)
T PRK05122 95 GLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHW 174 (399)
T ss_pred HHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHc
Confidence 766554320 14667899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHhHHHHHH
Q 017461 257 FGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~ 273 (371)
.||++.+++.+++.++.
T Consensus 175 ~g~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 175 GGLAGLGLLIMLLALLG 191 (399)
T ss_pred ccHHHHHHHHHHHHHHH
Confidence 99999988766655443
No 63
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.91 E-value=1.2e-22 Score=189.89 Aligned_cols=238 Identities=13% Similarity=0.067 Sum_probs=184.6
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh----
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---- 188 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---- 188 (371)
.++..+......+..|.+.++++.+..+.|++.+.+.++..+++++.|+++||+|||+++.++.++.+++.++.+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~ 105 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFL 105 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHc
Confidence 3444455566778888988999989999999999999999999999999999999999999988888877765542
Q ss_pred -hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 189 -AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 189 -~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
.+ +++.+++.|++.|++.+...+...+++.|++|+++|+++.++......+|..+||.+++.+.+..||++.|++.+
T Consensus 106 ~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~ 183 (417)
T PRK10489 106 PEP--SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAA 183 (417)
T ss_pred CCC--cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHH
Confidence 34 788999999999999888888889999999999999999999999999999999999999999889999999877
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
+..++..++.+ ..|+.+.++.+..... +.....++.++++|.++...+..++... ...+..++|.|
T Consensus 184 ~~~~~~~~~~~-~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~ 249 (417)
T PRK10489 184 AGTFITLLPLL-RLPALPPPPQPREHPL------------RSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPAL 249 (417)
T ss_pred HHHHHHHHHHH-hCCCCCCCCcccccch------------HHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHH
Confidence 77666555443 3444332211100000 0012245567788887766555554333 45677889999
Q ss_pred HHHhcCCChhhhhhhhhhe
Q 017461 348 YNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 348 l~~~~g~s~~~~~~~~~~~ 366 (371)
+++.+|+++.+.+++.+..
T Consensus 250 ~~~~~g~~~~~~g~~~~~~ 268 (417)
T PRK10489 250 ADEVWQMGAAQIGLLYAAV 268 (417)
T ss_pred HHhccCCChhHhHHHHHHH
Confidence 9988899999988876654
No 64
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=3.7e-22 Score=187.97 Aligned_cols=244 Identities=15% Similarity=0.145 Sum_probs=183.1
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV 188 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 188 (371)
+++......+.....+..++.+..++| +.....|+.+.+.++.++..++.|+++|.||||++++++.++..+|.++++.
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~diG-~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~at 127 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADIG-GSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCAT 127 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhcC-CCccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhc
Confidence 333333344444555677888999999 5688999999999999999999999999999999999999999999999999
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
++ |...++.+..+.|+|.|... .....++|..|.|.|+...++......+...+++.++..+..+.+|||.|++.++
T Consensus 128 A~--~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQ--NMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CC--cHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 99 99999999999999977665 4566689999999999888887777666667888888877777799999999999
Q ss_pred HHHHHHHHHhhcccCCCCCC--CCC-ChHHH--HHH--------------------------------------------
Q 017461 269 LGTVWFTVWLSKAHSSPAED--PQL-RPAEK--KLI-------------------------------------------- 299 (371)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~--~~~-------------------------------------------- 299 (371)
+..+.+++.+++..++++.+ .++ ..++. +.+
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~L 284 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLL 284 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHH
Confidence 87777666555554433322 111 11111 100
Q ss_pred ----hhhccCCCCcccchhhhhhcC-hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChh
Q 017461 300 ----VSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSK 357 (371)
Q Consensus 300 ----~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 357 (371)
..|...+.+++..|.+ ++|+ +.+...+++.++....++....+.|......++-++.
T Consensus 285 v~F~~wE~~~~~~~Pl~P~~-Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~ 346 (599)
T PF06609_consen 285 VAFVVWEWFGAPKDPLFPHR-LFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPI 346 (599)
T ss_pred HHHHHhhhhccCCCCcCCHH-HhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc
Confidence 1111111223345555 7777 5576777788888888888888999988887777654
No 65
>PRK12382 putative transporter; Provisional
Probab=99.90 E-value=8.5e-22 Score=182.56 Aligned_cols=164 Identities=18% Similarity=0.163 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
+..+.++.++......+..+.+|. +.+++|++..++|++.+++.++..++++++|+++||+|||+++.++.++..++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~ 96 (392)
T PRK12382 17 LFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGL 96 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHH
Confidence 333444555556666677777876 6789999999999999999999999999999999999999999999888777654
Q ss_pred Hhhh--------hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Q 017461 185 LTPV--------AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 185 ~~~~--------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (371)
.+.. .. +++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++||++++.+.+.
T Consensus 97 ~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~ 174 (392)
T PRK12382 97 AYLLAAILPVSAPF--KFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSH 174 (392)
T ss_pred HHHhhhccccchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3322 24 7889999999999999988888999999999999999999999999999999999999999998
Q ss_pred cCchhHHHHHhHHHH
Q 017461 257 FGWPSVFYSFGSLGT 271 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~ 271 (371)
+||++.+++..++.+
T Consensus 175 ~g~~~~~~~~~~~~~ 189 (392)
T PRK12382 175 FGFAALALTTMVLPL 189 (392)
T ss_pred cChHHHHHHHHHHHH
Confidence 999988776554433
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=9.7e-22 Score=178.81 Aligned_cols=219 Identities=28% Similarity=0.511 Sum_probs=196.2
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
.+.+..+...+......+..|.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||+.+.++.++..++.+++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~ 82 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLA 82 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHH
Confidence 34455667777788888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
+.+ +++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+..+||+.|++.+
T Consensus 83 ~~~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (352)
T cd06174 83 FAS--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILA 160 (352)
T ss_pred Hhc--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
++.++..++..+.. |.++...+..++..........+.|.+
T Consensus 161 ~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 161 ILGLLLALLLLFLL---------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred HHHHHHHHHHHHHH---------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 88777666654432 556778888888888899999999999
Q ss_pred HHHhcCCChhhhhhhhhhee
Q 017461 348 YNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 348 l~~~~g~s~~~~~~~~~~~~ 367 (371)
+.+.+|.+..+.+.+....+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~ 221 (352)
T cd06174 202 LQEVLGLSAAEAGLLLSLFG 221 (352)
T ss_pred HHHhcCCCHHHHHHHHHHHH
Confidence 99877999998887765543
No 67
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=1.3e-21 Score=180.65 Aligned_cols=236 Identities=9% Similarity=0.021 Sum_probs=180.3
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhH----HHHHHHHHHHHH
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----GFGVVWWSIATA 184 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----~~~~~~~~i~~~ 184 (371)
+.+.++...+......+++|.+.+++|.+..++|++.+++.++..++++++|+++||+||+... .++..+..+ .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--A 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--H
Confidence 3445556666667788899999999999999999999999999999999999999999985433 222222222 2
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
.+..++ +++.+++.|+++|.+.+...+...+++.++ .++|+++.|......++|.+++|++++.+.+.+|||..|+
T Consensus 87 ~~~~~~--~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAH--NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILA 162 (382)
T ss_pred HHHhhh--hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHH
Confidence 344567 899999999999999888888888887665 4788999999999999999999999999999999999998
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
+.+++..+. ++.+...++.++++++ ++ ++......+++++|+|+++...+..++.......+..+.
T Consensus 163 ~~~~~~~~~-~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~ 228 (382)
T TIGR00902 163 ILTAGLAFM-LIGFLIKPTIPPKDAI-PE------------DESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFS 228 (382)
T ss_pred HHHHHHHHH-HHHHHcCCCCCCCccc-cc------------cccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 876553332 2333333321111110 00 000112346778999999999999998888999999999
Q ss_pred HHHHHHhcCCChhhhhhhhhh
Q 017461 345 PTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 345 ~~~l~~~~g~s~~~~~~~~~~ 365 (371)
|.|+++ .|.++.++|.+..+
T Consensus 229 ~~~l~~-~g~s~~~~g~l~~~ 248 (382)
T TIGR00902 229 AIYWQA-AGISASATGLLWGI 248 (382)
T ss_pred HHHHHH-CCCCHhHHHHHHHH
Confidence 999988 79999999987664
No 68
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.89 E-value=5.6e-21 Score=178.00 Aligned_cols=226 Identities=17% Similarity=0.155 Sum_probs=175.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcch-----HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT-----VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 182 (371)
.++++.++..+......+.+|.+.+++|++..+ .|++.+++.++..+++++.|+++||+|||+++.++.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 97 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIV 97 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHH
Confidence 344555666677777888999999999988654 488999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhH
Q 017461 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (371)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 262 (371)
.+++.+.+ +++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+..|||+.
T Consensus 98 ~~~~~~~~--~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 174 (408)
T PRK09874 98 MVLMGLAQ--NIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPV 174 (408)
T ss_pred HHHHHHHh--hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 99998888 99999999999999865 4677788899999999999999999999999999999999999998999999
Q ss_pred HHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHH-HHHHHHHHHHHHHHH
Q 017461 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWAL-IVSHFCHNWGTFILL 341 (371)
Q Consensus 263 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~ 341 (371)
|++.+++.++..++.+++.++++...++....+ ..+..+.+++++++.. .+..++.........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (408)
T PRK09874 175 FFITASVLFLCFLVTLFCIRENFQPVSKKEMLH---------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIA 239 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhccCcccccchhhhH---------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHH
Confidence 999988877777666666665432211110000 0112234566666543 333334444455566
Q ss_pred HhhHHHHHHh
Q 017461 342 TWMPTYYNQV 351 (371)
Q Consensus 342 ~~~~~~l~~~ 351 (371)
.+++.|+.+.
T Consensus 240 ~~~~~~~~~~ 249 (408)
T PRK09874 240 PILTLYVREL 249 (408)
T ss_pred HHHHHHHHHH
Confidence 7778888774
No 69
>TIGR00898 2A0119 cation transport protein.
Probab=99.89 E-value=2.5e-22 Score=192.31 Aligned_cols=156 Identities=22% Similarity=0.272 Sum_probs=143.2
Q ss_pred hhhhhhhhhcCCC---cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 125 IAILPMSAEFNWN---PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 125 ~~~~~~~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
+..+.+.+|+|++ ..+.+++.+++.++.++++++.|+++||+|||++++++.++.+++.+++++++ +++.++++|
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~r 187 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--NYTVFLVFR 187 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--cHHHHHHHH
Confidence 5678899999998 89999999999999999999999999999999999999999999999999999 999999999
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
++.|++.+...+....++.|++|+++|+.+.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+.. ++.
T Consensus 188 ~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 188 LLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-Hhc
Confidence 999999999999999999999999999999999999999999999998877654 9999999988877766655 566
Q ss_pred cCCCC
Q 017461 282 HSSPA 286 (371)
Q Consensus 282 ~~~~~ 286 (371)
||+++
T Consensus 264 ~esp~ 268 (505)
T TIGR00898 264 PESPR 268 (505)
T ss_pred CCChH
Confidence 77664
No 70
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.89 E-value=1.5e-21 Score=178.48 Aligned_cols=232 Identities=13% Similarity=0.054 Sum_probs=179.6
Q ss_pred hhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-----CCchh-HHHHHHHHHHHHHHhhhhhc-cC
Q 017461 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSIATALTPVAAK-LG 193 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~~~~~~~~~~-~~ 193 (371)
...++..|.+.+++|++.+++|++.+. .+...+ .+++|+++||+ ||||. ++.+.++.+++.++.++.+. .+
T Consensus 5 ~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~ 82 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTD 82 (356)
T ss_pred hhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchh
Confidence 456778899999999999999999766 455554 99999999998 89987 46677777777767777631 15
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC--------chhHHHH
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--------WPSVFYS 265 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--------w~~~f~~ 265 (371)
.+.+.+..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+..| ||..|++
T Consensus 83 l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i 162 (356)
T TIGR00901 83 LPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFW 162 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHH
Confidence 67777888888988888899999999999999999999999999999999999999999988888 9999999
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChh---HHHHHHHHHHHHHHHHHHHH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP---VWALIVSHFCHNWGTFILLT 342 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~ 342 (371)
.+++.++..+..++..+|+...++.. +++.. .....++++++++. ++.+.+..++....++....
T Consensus 163 ~ai~~l~~~~~~~~~~~e~~~~~~~~-~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (356)
T TIGR00901 163 TALLILPGLLVTLFLAKEPQEDASVP-KPLTQ-----------AVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATV 230 (356)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccc-hhHHH-----------HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 88877776555554455543221111 11000 01235566777775 77777777777888888899
Q ss_pred hhHHHHHHhcCCChhhhhhhhhhee
Q 017461 343 WMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 343 ~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
++|.|+++ +|+++.+.+.+....+
T Consensus 231 ~~~~~l~~-~g~~~~~~g~~~~~~~ 254 (356)
T TIGR00901 231 LTTLFLLD-MGFSKEEIALVAKING 254 (356)
T ss_pred HHHHHHHH-cCCCHHHHHHHhHHHH
Confidence 99999998 8999999987776543
No 71
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.89 E-value=5.7e-21 Score=181.41 Aligned_cols=242 Identities=14% Similarity=0.145 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-----CCchh-HHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAV-LGFGVVWWSI 181 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i 181 (371)
.+++..+..++.....+..+|.+.++.|.+..+++.+ +.....+ ++.+++|+++||+ |||+. ++++.++.++
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~ 93 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLV 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHH
Confidence 3444455566666678888999999999999999997 3333443 6899999999999 99986 6677777777
Q ss_pred HHHHhhhhh-ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-ccCc
Q 017461 182 ATALTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGW 259 (371)
Q Consensus 182 ~~~~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw 259 (371)
+.+++++.+ ..+++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ..||
T Consensus 94 ~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GW 173 (491)
T PRK11010 94 AIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGW 173 (491)
T ss_pred HHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCH
Confidence 777777753 12688899999999999999999999999999999999999999999999999999999999998 5799
Q ss_pred hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFI 339 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 339 (371)
|.+|++.+++.++..+..++ .||++...+..... ++....+++++++++..|...+..++.......
T Consensus 174 r~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~~------------~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~ 240 (491)
T PRK11010 174 QGMYWLMAALLIPCIIATLL-APEPTDTIPVPKTL------------EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAF 240 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-cCCCccccccccch------------hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHH
Confidence 99999998887766555443 55543221100000 000123567788888887776666666666667
Q ss_pred HHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 340 LLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 340 ~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
...+.+.|+.+.+|++..+++++..
T Consensus 241 ~~~~~~~~l~~~~G~s~~~~g~~~~ 265 (491)
T PRK11010 241 AMSLTTTFLIRGVGFDAGEVGLVNK 265 (491)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 7778888887778999999998864
No 72
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.88 E-value=1.7e-21 Score=180.21 Aligned_cols=237 Identities=18% Similarity=0.195 Sum_probs=178.0
Q ss_pred HHHHhhhhhhhhhhhhhhhhcC--CCcchHHHHHHH-----HHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 114 LLCNMDRVNMSIAILPMSAEFN--WNPATVGLIQSS-----FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
+.++++.+.++...+.+.+++. .++.+.+.+.+. ..++..+++++.|+++||+|||+++.++.++.+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~ 82 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLI 82 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4567788888888888777754 455666665543 223344688999999999999999999999999999999
Q ss_pred hhhhccChh--------HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh----
Q 017461 187 PVAAKLGLP--------FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI---- 254 (371)
Q Consensus 187 ~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~---- 254 (371)
++++ +++ .++++|+++|++.+...+....++.|++++++|+++.++...+..+|.++++.++..+.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~ 160 (394)
T TIGR00883 83 GLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLG 160 (394)
T ss_pred hhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9998 764 48889999999999999999999999999999999999999999999999998887654
Q ss_pred ----cccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChh--HHHHHH
Q 017461 255 ----HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPP--VWALIV 328 (371)
Q Consensus 255 ----~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~ 328 (371)
+..|||+.|++.+++.++..++ ....+|++...+ ++ + +++....++++.+++++ ++...+
T Consensus 161 ~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (394)
T TIGR00883 161 DDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEK-----AQ-----E---KHKKKRGPIRETLTKHRKPFLLGLG 226 (394)
T ss_pred HHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHH-----HH-----h---ccccccCCHHHHHHhchHHHHHHHH
Confidence 3578999999877665544333 223333322110 00 0 01111334566676665 777777
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 329 SHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
..++.....+....++|.|+++.+|++..+.+.+....
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 264 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLS 264 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHH
Confidence 77777788888889999999887899998888765543
No 73
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=7.8e-23 Score=178.29 Aligned_cols=212 Identities=17% Similarity=0.137 Sum_probs=179.9
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhH
Q 017461 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 215 (371)
Q Consensus 136 ~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 215 (371)
-++.++|++...+.+...+.+++.|.+.||+|+|-.+++|.+++...++++++.+ +++.++++|.+||+|.++..+..
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHHHHhhh
Confidence 3567899999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHhcccCCcc-hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChH
Q 017461 216 NNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPA 294 (371)
Q Consensus 216 ~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
.+++++.||.++ |++++|+...+.++|..+||++||++.+..|.+.+|++.++++++..++.++..+.....++..
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~--- 257 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST--- 257 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc---
Confidence 999999999664 7999999999999999999999999999999999999999999998888777766543332111
Q ss_pred HHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 295 EKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
....++++++++|.++.........+.......-.++.+..+...-+.-+.|+.+...
T Consensus 258 --------------~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~ 315 (464)
T KOG3764|consen 258 --------------EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPA 315 (464)
T ss_pred --------------ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeeccc
Confidence 1134677799999998877777777777777777777777776664343666665443
No 74
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.88 E-value=3.7e-21 Score=177.56 Aligned_cols=232 Identities=12% Similarity=0.109 Sum_probs=174.3
Q ss_pred HHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCc----hhHHHHHHHHHHHHHHhhhh
Q 017461 114 LLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK----AVLGFGVVWWSIATALTPVA 189 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~~~~~ 189 (371)
+........+.+.+|.+.+++|.+..++|++.+++.++..++++++|+++||+||| +.+.++..+. ........
T Consensus 14 ~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~ 91 (382)
T PRK11128 14 FGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGA 91 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhc
Confidence 33344556778888999999999999999999999999999999999999999994 3333222222 22233334
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHH
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 269 (371)
+ ++|.+++.|++.|++.+...+...+++.++ .++|+++.+.......+|.++||++++++.+++|||..|++.++.
T Consensus 92 ~--~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~ 167 (382)
T PRK11128 92 H--SFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAG 167 (382)
T ss_pred c--cHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHH
Confidence 6 899999999999999888888888887776 456888889999999999999999999999999999999987765
Q ss_pred HHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 017461 270 GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYN 349 (371)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 349 (371)
.++..++. ++.|+.+++.++ ++ ..++....+++++|+|.++...+..++..........++|.|++
T Consensus 168 ~~~~~~~~-~~~~~~~~~~~~----~~---------~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 233 (382)
T PRK11128 168 VASMLLGQ-LLRPTIMPQGES----RQ---------QESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQ 233 (382)
T ss_pred HHHHHHHH-HccCCCCCcccc----cc---------ccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHH
Confidence 44443333 333332111100 00 00011346788999999998888888877777778888899997
Q ss_pred HhcCCChhhhhhhhhhe
Q 017461 350 QVSSFGSKTLSETVQVC 366 (371)
Q Consensus 350 ~~~g~s~~~~~~~~~~~ 366 (371)
+ .|++..+.|.+.+..
T Consensus 234 ~-~g~s~~~~g~~~~~~ 249 (382)
T PRK11128 234 A-AGYSASTIGYLWSLG 249 (382)
T ss_pred H-CCCCHhHHHHHHHHH
Confidence 7 799998888876643
No 75
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=1.5e-20 Score=165.09 Aligned_cols=247 Identities=18% Similarity=0.207 Sum_probs=204.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
.+..+...+++.++......+++|.+++.|+++..+.+++...+..++.+++++.|++.+|+|+|+.+++|+.++++++.
T Consensus 14 ~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~ 93 (422)
T COG0738 14 AFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAA 93 (422)
T ss_pred HHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 44555666677777788888999999999999999999999999999999999999999999999999999999999998
Q ss_pred Hhhhhh-ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc-------
Q 017461 185 LTPVAA-KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR------- 256 (371)
Q Consensus 185 ~~~~~~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~------- 256 (371)
++.-+. ..++..++++-++.|.|.+...+.++++++...++++....+++.+..+++|.+++|++++.+..+
T Consensus 94 lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~ 173 (422)
T COG0738 94 LFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMS 173 (422)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccC
Confidence 885322 127889999999999999999999999999999998889999999999999999999999988762
Q ss_pred ------------cCchhHHHHHhHHHHHHHHHHhhcc-cCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhH
Q 017461 257 ------------FGWPSVFYSFGSLGTVWFTVWLSKA-HSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPV 323 (371)
Q Consensus 257 ------------~gw~~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 323 (371)
..|+++|.+.+.+.+++.+...... |+.+....+..+. +.....+++++|.+
T Consensus 174 ~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~---------------~~~~~~~l~~~~~~ 238 (422)
T COG0738 174 AAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGAS---------------GSAGLSSLFQNKHL 238 (422)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccccccccc---------------ccchHHHHHhChHH
Confidence 2488888888877766666554432 2222211111110 01145678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 324 WALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
+...++.|++......+..|++.|+.+..|++..+++..++..
T Consensus 239 ~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~ 281 (422)
T COG0738 239 RLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFF 281 (422)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHH
Confidence 9999999999999999999999999997799999988877653
No 76
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=2.5e-20 Score=172.67 Aligned_cols=231 Identities=18% Similarity=0.116 Sum_probs=162.3
Q ss_pred HHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhCCchhH-HHHHHHHHHHHHHhhhh
Q 017461 113 FLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVL-GFGVVWWSIATALTPVA 189 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~~~ 189 (371)
.++..+......+.++. +.+++|++.+++|++.+...+ +..++.+++|+ .||+|||+.+ ..+.++.+++.++.+++
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHh
Confidence 44455555555666655 678999999999999876655 55555555555 9999999875 45566666778888888
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcch--HHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
+ +++.+++.+.+.|...+...+...+++.++.+++.| +...++...+.++|.++||++++.+.+++|||..|++.+
T Consensus 103 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~ 180 (393)
T PRK15011 103 R--NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAA 180 (393)
T ss_pred h--HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHH
Confidence 8 888877665555544456778888888888766555 345678889999999999999999999899999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcC-hhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSK-PPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
++.++..++.+++.||.+.+++... .+ .+ . ..++ +..+......++....+..+..++|.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~-----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (393)
T PRK15011 181 VAFIVCGVMVWLFLPSMRKELPLAT-GT----------LE-----A---PRRNRRDTLLLFVICTLMWGTNSLYIINMPL 241 (393)
T ss_pred HHHHHHHHHHHhhcCccCCCCcccc-cc----------cc-----c---cccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777777776776543322110 00 00 0 0112 22333333444445556667778999
Q ss_pred HHHHhcCCChhhhhhhhhh
Q 017461 347 YYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 347 ~l~~~~g~s~~~~~~~~~~ 365 (371)
|+++.+|+++.+++.+...
T Consensus 242 ~l~~~~~~~~~~~g~~~~~ 260 (393)
T PRK15011 242 FIINELHLPEKLAGVMMGT 260 (393)
T ss_pred HHHHHcCCCHHHHHHHHHH
Confidence 9988889999998887654
No 77
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.87 E-value=2.7e-20 Score=169.09 Aligned_cols=238 Identities=15% Similarity=0.134 Sum_probs=176.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcch-HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
+|.++++.. .+...+...|.+.+++|++.++ .|.+.+++..++++++++.|+++||+|.|+++.++.+.+.+..++.
T Consensus 32 lC~fGF~~e--~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~ 109 (511)
T TIGR00806 32 LCFYGFMAQ--FRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLL 109 (511)
T ss_pred HHHHHHHHH--hhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 444443332 4677888899999999999999 9999999999999999999999999999999999999999999999
Q ss_pred hhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHH
Q 017461 187 PVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (371)
Q Consensus 187 ~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~ 266 (371)
++++ +++.+.+.|++.|++.|..+ +...++..|+|+++|+++.|+...+..+|.++++++++.+ ..+|||+.+.+.
T Consensus 110 ~fa~--Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~Ln 185 (511)
T TIGR00806 110 LLGT--SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTLN 185 (511)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHHH
Confidence 9999 99999999999999999998 9999999999999999999999999999999999999994 468999765543
Q ss_pred hH--HHHHHHHHHhhcccCCCCC---CCCCChH-----HHHHHhhhcc-CCC--C---------cccchhhhhhcChhHH
Q 017461 267 GS--LGTVWFTVWLSKAHSSPAE---DPQLRPA-----EKKLIVSSCA-SKE--P---------VKTIPWGLILSKPPVW 324 (371)
Q Consensus 267 ~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~-~~~--~---------~~~~~~~~l~~~~~~~ 324 (371)
-+ .+..+.+++.+++|..++. ++..... +.+....+.. ... . ....+++...+++.++
T Consensus 186 ~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl 265 (511)
T TIGR00806 186 IISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLL 265 (511)
T ss_pred HHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchh
Confidence 22 2222233333444533321 0100000 0000000000 000 0 0122344556788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 017461 325 ALIVSHFCHNWGTFILLTWMPTYYNQV 351 (371)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (371)
.-.+-+.+..++++.+.+|.-....+.
T Consensus 266 ~WSlWwa~a~~g~~qv~~Y~Q~LW~~v 292 (511)
T TIGR00806 266 LWSLWWVFNSAGYYLITYYVHTLWGTL 292 (511)
T ss_pred hhhHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 778888888888888887776666553
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.87 E-value=3.3e-20 Score=172.42 Aligned_cols=242 Identities=13% Similarity=0.062 Sum_probs=185.2
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-----CCch-hHHHHHHHHHHH
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKA-VLGFGVVWWSIA 182 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~~~~~~~~~~i~ 182 (371)
.+..++..+.........+|.+.++.|++.+++|++..+... .+..+++|+++||+ |||| .+.++.++.+++
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 4 MLLLGFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344566677777778888999999999999999999777665 69999999999999 8875 688888888888
Q ss_pred HHHhhhhhc-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc-cCch
Q 017461 183 TALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWP 260 (371)
Q Consensus 183 ~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~ 260 (371)
..+.++.+. .+++.+++..++.+++.+...++..+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~ 161 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWG 161 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHH
Confidence 877777631 25788888888889888888999999999999999999999999999999999999999999885 5999
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (371)
..|++.+++.++..+.. ++.+|++..+++.++..+ ....++++++|+|.++..++..++........
T Consensus 162 ~~f~i~a~~~l~~~l~~-~~~~e~~~~~~~~~~~~~------------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~ 228 (402)
T PRK11902 162 NTYLLMAGLMLAGALTT-LWAPEPEVPARPPRSLGE------------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFA 228 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCcccccccchhHH------------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHH
Confidence 99999888776655443 445554332211110000 01235677899999988777766666554444
Q ss_pred HHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 341 LTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 341 ~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
..+.+.++.+.+|+++.+.++++..
T Consensus 229 ~~~~~~~l~~~~G~~~~~~g~~~~~ 253 (402)
T PRK11902 229 GSLSTTFLIRGAGFSAGEVGIVNKT 253 (402)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHhH
Confidence 4455556666689999999988754
No 79
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=1.7e-20 Score=196.02 Aligned_cols=249 Identities=14% Similarity=0.123 Sum_probs=180.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhh-hhhhhcCCC-cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHH---HHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAIL-PMSAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF---GVVWWSIA 182 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~---~~~~~~i~ 182 (371)
..++..+.+++....+..+.. .+..+.+.+ ....++..+++.+.+.++++++|+++||||||+++.. +.++.++.
T Consensus 19 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~ 98 (1140)
T PRK06814 19 TQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAAL 98 (1140)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHH
Confidence 334444444444443333333 344444433 3457888999999999999999999999999997533 22233333
Q ss_pred HHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhH
Q 017461 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (371)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 262 (371)
.+++...+ +++.++++|+++|++.+...++..+++.+++++++|++++|+.+++.++|.++||+++|++.+..||++.
T Consensus 99 ~~~~~~~~--s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~ 176 (1140)
T PRK06814 99 AIYGFHLN--SVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVIL 176 (1140)
T ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHH
Confidence 33333446 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHH
Q 017461 263 FYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLT 342 (371)
Q Consensus 263 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (371)
|+..+++.++.++ +.++.++.+........... .. ......++.+.+++.++...+..++.++....+.+
T Consensus 177 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1140)
T PRK06814 177 VALLMGIAVLGWL-ASLFIPKTGNAAPDLKIDRN-II--------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLS 246 (1140)
T ss_pred HHHHHHHHHHHHH-HHhhCCCCCCCCCCCeeccc-hH--------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHH
Confidence 9554444444333 34444444322211110000 00 00123567788999999998888888888888889
Q ss_pred hhHHHHHHhcCCChhhhhhhhhheee
Q 017461 343 WMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 343 ~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
++|.|+++.+|.++..+|++++..++
T Consensus 247 ~~p~~~~~~~g~~~~~~g~~~~~~~~ 272 (1140)
T PRK06814 247 QLPLLAKETLGGDENVATLFLAVFSV 272 (1140)
T ss_pred HhHHHHHHHcCCchHHHHHHHHHHHH
Confidence 99999999899999999988776543
No 80
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=2.7e-20 Score=194.96 Aligned_cols=238 Identities=15% Similarity=0.141 Sum_probs=175.9
Q ss_pred hhhhhhhhhhhhhcCCCcc--hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh---hhhccChh
Q 017461 121 VNMSIAILPMSAEFNWNPA--TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAKLGLP 195 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~~~~~~~ 195 (371)
.....+.+.+..+++.+.. ..+++.+++.+++.++++++|+++||+|||++++++.++.+++.++.. .+. +++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~--~~~ 104 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLG--WFW 104 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHc--cHH
Confidence 3344555566667776543 479999999999999999999999999999999998877666555443 345 799
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc--------c-CchhHHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--------F-GWPSVFYSF 266 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~-gw~~~f~~~ 266 (371)
.++++|+++|++.+...++..+++.|++|+++|++++|+...+..+|.++|+++++++.+. . +|++.+.+.
T Consensus 105 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 184 (1146)
T PRK08633 105 LAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLV 184 (1146)
T ss_pred HHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999875 2 344554444
Q ss_pred hHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 267 GSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
++...++.++..+..++.+.........+. ..........++.+++++.++...+..++..+..+.+..++|.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (1146)
T PRK08633 185 LLAVAVLGLIFAYRLPKVPAAAPEVFDKKK-------YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPA 257 (1146)
T ss_pred HHHHHHHHHHHHhcCcCCCCCCcccccccc-------cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 444433344444445555433221110000 0000011235667888899888888777777777888889999
Q ss_pred HHHHhcCCChh-hhhhhhhhee
Q 017461 347 YYNQVSSFGSK-TLSETVQVCT 367 (371)
Q Consensus 347 ~l~~~~g~s~~-~~~~~~~~~~ 367 (371)
|+.+.+|++.. .++++.+..+
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASA 279 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHH
Confidence 99988999988 8887765544
No 81
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.86 E-value=6.6e-20 Score=158.79 Aligned_cols=243 Identities=12% Similarity=0.189 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHH
Q 017461 103 WFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (371)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 182 (371)
++.+..+.+..+--=-..+.++++++++.+++|++.+..|++.++..+...+.+++..++..|+|.++.+..++++.++|
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G 90 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAG 90 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 33333333333333334566789999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-Cchh
Q 017461 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPS 261 (371)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~ 261 (371)
.++-.... .+.++.+-.+.|+|.+...+..+.++-+.| +++-+..+|+|....++|.++++.+.-.+.++. |||.
T Consensus 91 ~~iR~~~~---~~~L~~gt~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~ 166 (395)
T COG2807 91 ILIRSLGG---LPLLFLGTLLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRG 166 (395)
T ss_pred HHHHhccc---HHHHHHHHHHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHH
Confidence 99987763 678999999999999999999999999999 578899999999999999999999999888877 7999
Q ss_pred HHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 017461 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 341 (371)
.....+.++++.++..+.-. ..+...+. ..+..+-..++|+|..|.+.+.+.++++.+|...
T Consensus 167 aL~~WAl~allAl~~WlPq~-~r~~~~~~-----------------~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~ 228 (395)
T COG2807 167 ALGFWALLALLALLIWLPQA-LREQAASI-----------------ATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVI 228 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhc-cccccccc-----------------ccccccccccccCchhHHHHHHHHhhHHHHHHHH
Confidence 99999888887766655432 11100000 0011222348999999999999999999999999
Q ss_pred HhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 342 TWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 342 ~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
.|+|.++.| .|+|+.++|.+++..++
T Consensus 229 ~WLP~ili~-~G~sa~~aG~llsl~~l 254 (395)
T COG2807 229 GWLPAILID-RGLSAAEAGSLLSLMQL 254 (395)
T ss_pred HHHHHHHHH-cCCCHHHhhhHHHHHHH
Confidence 999999999 69999999988876553
No 82
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=6.9e-20 Score=173.20 Aligned_cols=167 Identities=12% Similarity=0.136 Sum_probs=144.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhh-hhh--cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPM-SAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIAT 183 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~ 183 (371)
.+++..+...+..+.+.+.+|.+ .++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~ 93 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGH 93 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHH
Confidence 34445555566666666666665 455 89999999999999999999999999999999 899999999999999999
Q ss_pred HHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcc---hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE---RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 184 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
++.++++ +++.+++++++.|+|.|...+...+++++++|+++ |+.+.++++.+.++|.++||.+++++.+++||+
T Consensus 94 ~~~~~~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~ 171 (475)
T TIGR00924 94 FMLAMSI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYH 171 (475)
T ss_pred HHHHhcc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChH
Confidence 9999988 88889999999999999999999999999998754 888999999999999999999999999999999
Q ss_pred hHHHHHhHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTV 276 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~ 276 (371)
+.|++.++..++..+.
T Consensus 172 ~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 172 VGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999877654444333
No 83
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.85 E-value=1.9e-20 Score=179.02 Aligned_cols=251 Identities=19% Similarity=0.176 Sum_probs=180.6
Q ss_pred hHHHHHHHHHHHHHHHhh--hhhhhhhhhhhhhhcC---CCc----chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhH
Q 017461 102 RWFIVVLCFSAFLLCNMD--RVNMSIAILPMSAEFN---WNP----ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL 172 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~----~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~ 172 (371)
.........+..+..+.+ ....+.....+.++.. ... .+.+|+.+.+.++..++++++|+++|++|||+.+
T Consensus 43 ~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l 122 (513)
T KOG0254|consen 43 VILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTL 122 (513)
T ss_pred hHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 344444445555555554 3445555555555321 122 3459999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 173 GFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
+++.+++.++.+++++++ |+++++++|++.|+|.|+.....+.+++|..|++.||...++.+....+|..++..++..
T Consensus 123 ~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~ 200 (513)
T KOG0254|consen 123 LLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYG 200 (513)
T ss_pred HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999 999999999999999999999999999999999999999999999999999999655555
Q ss_pred Hhcc-cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCC-hHHHHHHhhhcc---------------------CCCCc
Q 017461 253 LIHR-FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLR-PAEKKLIVSSCA---------------------SKEPV 309 (371)
Q Consensus 253 l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------------------~~~~~ 309 (371)
..+. .+||..+++..+.+++..+. +++.||+|+.--+.. ..+.+....... .....
T Consensus 201 ~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (513)
T KOG0254|consen 201 TSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAE 279 (513)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccc
Confidence 5433 48999999988888888888 777888876422211 111110000000 00001
Q ss_pred ccchhhhhhc----ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCCh
Q 017461 310 KTIPWGLILS----KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGS 356 (371)
Q Consensus 310 ~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~ 356 (371)
....+.++++ ++.++...+..+.+..+++...+|.+.+++.. |.+.
T Consensus 280 ~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~-g~~~ 329 (513)
T KOG0254|consen 280 GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA-GLKS 329 (513)
T ss_pred ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-CCCC
Confidence 1112333333 23344566666677777788889999998884 6653
No 84
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.85 E-value=1.1e-19 Score=168.58 Aligned_cols=247 Identities=10% Similarity=0.018 Sum_probs=171.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
.+....++.......+.+.+|. +.+++|.+..+.|++.+++.++..+++++.|+++||+|||+.++.+.+..+++....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 85 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPF 85 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 3444455555556667777766 466799999999999999999999999999999999999999998776665544322
Q ss_pred h---hhh---ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 187 P---VAA---KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 187 ~---~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
. +.+ ...++.+++.+++.|++.+...+....++.+.. ++++...|......++|.++||++++.+.+ .||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~ 162 (396)
T TIGR00882 86 FIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQ 162 (396)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-cCch
Confidence 1 111 002344567789999998888888888877754 334567788888889999999999998876 5999
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (371)
..|++.+++.++..++.+...++++.++.. ++. .+..+++.+..++++++|+|.++...+..++....+...
T Consensus 163 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 234 (396)
T TIGR00882 163 IVFWLGSGFALILMLLLMFAKPKAPSSATV----ANA----LGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVF 234 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCchhhhh----hcc----cccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHH
Confidence 999999888887766655544443221100 000 000111122346778899999887777766666666667
Q ss_pred HHhhHHHHHHhc---CCChhhhhhhhhh
Q 017461 341 LTWMPTYYNQVS---SFGSKTLSETVQV 365 (371)
Q Consensus 341 ~~~~~~~l~~~~---g~s~~~~~~~~~~ 365 (371)
..+.+.|+.+.+ +.+....|.+.++
T Consensus 235 ~~~~~~y~~~~~~~~~~~~~~~g~~~~~ 262 (396)
T TIGR00882 235 DQQFANFFTSFFATPQQGTRVFGYVTTM 262 (396)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHH
Confidence 777888887754 4555556655543
No 85
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.85 E-value=2.1e-19 Score=170.09 Aligned_cols=162 Identities=17% Similarity=0.257 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhh-hhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSI-AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIA 182 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~ 182 (371)
.+..+++..+...+..+.+.. +..++.+++|++..+.+++.+.+.....+..+++|+++|| +|||++++++.++++++
T Consensus 15 ~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g 94 (489)
T PRK10207 15 PFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIG 94 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHH
Confidence 344444455555555555554 4555788899999999999999999999999999999999 99999999999999999
Q ss_pred HHHhhhhhccChhH-HHHHHHHHHhhhhchhhhHHHHHhcccCCc--chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 183 TALTPVAAKLGLPF-LLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 183 ~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.++++++. +... ++++|+++|+|.|...+...++++|.+|++ +|+.++++++.+.++|.++||.+++++.+++||
T Consensus 95 ~~~~~~~~--~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw 172 (489)
T PRK10207 95 YFMTGMSL--LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGY 172 (489)
T ss_pred HHHHHHhc--cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhCh
Confidence 99999987 5444 558899999999999999999999999877 457789999999999999999999999999999
Q ss_pred hhHHHHHhH
Q 017461 260 PSVFYSFGS 268 (371)
Q Consensus 260 ~~~f~~~~~ 268 (371)
|+.|++.++
T Consensus 173 ~~~F~i~~i 181 (489)
T PRK10207 173 SVTYNLCGA 181 (489)
T ss_pred HHHHHHHHH
Confidence 999998654
No 86
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.84 E-value=5.9e-20 Score=159.53 Aligned_cols=231 Identities=15% Similarity=0.048 Sum_probs=154.2
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhh
Q 017461 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (371)
Q Consensus 135 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 214 (371)
+.+..-.|++.+.|++...+.++.+|.++||+|||+++.+|++..++..++.+++. |+..+++.|++.|+.-|- ...
T Consensus 64 ~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kgn-l~v 140 (451)
T KOG2615|consen 64 GASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKGN-LSV 140 (451)
T ss_pred cccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccCc-hHH
Confidence 33455679999999999999999999999999999999999999999999999999 997777779999999774 588
Q ss_pred HHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc---ccCchhHHHHHh---HHHHHHHHHHhhcccCCCCCC
Q 017461 215 MNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH---RFGWPSVFYSFG---SLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---~~gw~~~f~~~~---~~~~~~~~~~~~~~~~~~~~~ 288 (371)
..++++|.+++|+|+.+++.++..+++|.++||.+||++.. ..|--+-++... ++.......+.++.||+-..+
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence 89999999999999999999999999999999999999987 233211111111 111111223334556654333
Q ss_pred CCCChHH-HHHHhhhccCCCCcccchhhhhhcChhHH-------HHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhh
Q 017461 289 PQLRPAE-KKLIVSSCASKEPVKTIPWGLILSKPPVW-------ALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLS 360 (371)
Q Consensus 289 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~ 360 (371)
++.++.. ..+......+-.+.....--.++||+... .+.+..+.+...+..+..+...+....+|+++.+.|
T Consensus 221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 2221100 00000000000000000011133443322 334444555555555555555555667899999999
Q ss_pred hhhhheee
Q 017461 361 ETVQVCTT 368 (371)
Q Consensus 361 ~~~~~~~~ 368 (371)
.+++..++
T Consensus 301 ~vl~~tGl 308 (451)
T KOG2615|consen 301 KVLSTTGL 308 (451)
T ss_pred eeeehhhH
Confidence 88876654
No 87
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.83 E-value=1.3e-18 Score=160.24 Aligned_cols=262 Identities=16% Similarity=0.178 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhh--------hhcC--CCcch----HHHHHHHHHHHHHHHHHHHHHhhhhhCCch
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMS--------AEFN--WNPAT----VGLIQSSFFWGYLLTQIAGGIWADTVGGKA 170 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~--~~~~~----~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~ 170 (371)
....+.++.+-.++....+++..+.+. +.+| +++++ .+.+.+++.+|.++|+++.|+++||+|||.
T Consensus 12 ~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~ 91 (485)
T KOG0569|consen 12 AVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRKN 91 (485)
T ss_pred HHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH
Confidence 334444444666666666665544433 3455 34433 467788999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHhhhhhc-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHh
Q 017461 171 VLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 249 (371)
Q Consensus 171 ~~~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 249 (371)
.++++.++..++.++..++.. .++..++++|++.|+..|......+.++.|..|.+.||....+.+.+..+|..++..+
T Consensus 92 ~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~ 171 (485)
T KOG0569|consen 92 ALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVL 171 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888877665532 1789999999999999999999999999999999999999999999999999999776
Q ss_pred HH--HHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCC-CC-hHHH-----------------HHHhh--hccCC
Q 017461 250 SP--FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ-LR-PAEK-----------------KLIVS--SCASK 306 (371)
Q Consensus 250 ~~--~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----------------~~~~~--~~~~~ 306 (371)
+. .+.+...|++.+.+..+++++.+ +.+.+.||+|+.--. ++ .++. +...+ +.++.
T Consensus 172 ~l~~ilGt~~~W~~l~~~~~i~~~~~l-~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~ 250 (485)
T KOG0569|consen 172 GLPSLLGTEDLWPYLLAFPLIPALLQL-ALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEEL 250 (485)
T ss_pred ccHHhcCCCcchHHHHHHHHHHHHHHH-HHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhcc
Confidence 64 33345569998888777666554 445667888874211 11 1111 11111 11122
Q ss_pred CCcccchhhhhhcChhHHH-----HHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 307 EPVKTIPWGLILSKPPVWA-----LIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 307 ~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
++.+..+++++++++..+. +.+....+..+.++..+|...++.+ -|++..++.+.....++
T Consensus 251 ~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-aG~~~~~a~~an~~~g~ 316 (485)
T KOG0569|consen 251 EKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-AGFTPEEAQYANLGIGI 316 (485)
T ss_pred ccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-cCCCHHHHHHHHHHHHH
Confidence 2235678889999876553 2333334555667788888888888 59999988777665543
No 88
>PTZ00207 hypothetical protein; Provisional
Probab=99.82 E-value=3.3e-18 Score=162.42 Aligned_cols=180 Identities=16% Similarity=0.118 Sum_probs=149.3
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
..++|..+..........+ ..+.++...+.+++++|++..+++++.++. ....+++++.|++.||+|+|+++.++.++
T Consensus 23 e~~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTS-FMYAFNLISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred ccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3456776665555554443 345677888999999999999999998874 44567788899999999999999999999
Q ss_pred HHHHHHHhhhh------hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHH-HHHhHH
Q 017461 179 WSIATALTPVA------AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT-GLAFSP 251 (371)
Q Consensus 179 ~~i~~~~~~~~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~-g~~~~~ 251 (371)
++++.++++++ . +++.+++.|++.|+|.+...+.+...+.+||| ++||++.|+...+.++|.++ +++..+
T Consensus 101 ~~iG~ll~ala~~~~i~~--s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEG--SVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHhcccccC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 5 89999999999999999998999999999995 78999999999999999976 455555
Q ss_pred HHhcccCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 252 FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 252 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
++. .+|++.|++.++++++..++.+.+.++++
T Consensus 178 l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 178 FFS--DNTSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 544 36889999999998888887777776654
No 89
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.81 E-value=1.4e-18 Score=162.55 Aligned_cols=242 Identities=14% Similarity=0.052 Sum_probs=151.8
Q ss_pred HHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh---h
Q 017461 113 FLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---V 188 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~ 188 (371)
.++..+......+.++. +.+++|++..+.|++.+++.++..+++++.|+++||+|||++++++..+.+++..... .
T Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~ 98 (420)
T PRK09528 19 FFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVF 98 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333434445555555 5666999999999999999999999999999999999999999887766655443221 1
Q ss_pred hhcc---ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 189 AAKL---GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 189 ~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
++.. .+...++++++.|.+.....+....+..+ . .+++++.+|......++|.+++|++++.+.+ .+|+++|++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~ 175 (420)
T PRK09528 99 APLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWL 175 (420)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHH
Confidence 1100 11112233444444333333333333322 2 3456778889899999999999999999887 589999999
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
.+++.++..++.++..++++++.... +++ ...+++......++++|+|.++.+.+..++....+.....++|
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~ 247 (420)
T PRK09528 176 GSGSALILLVLLFFAKPDAPSTAKVA-NAL-------GANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFP 247 (420)
T ss_pred HHHHHHHHHHHHhcccccccchhhhc-cch-------hcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHH
Confidence 88887776666655544433221100 000 0001111223455688899887766665555555555666777
Q ss_pred HHHHHhc---CCChhhhhhhhhh
Q 017461 346 TYYNQVS---SFGSKTLSETVQV 365 (371)
Q Consensus 346 ~~l~~~~---g~s~~~~~~~~~~ 365 (371)
.|+.+.+ +.+..+.+.+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~~~~ 270 (420)
T PRK09528 248 NFFASFFATPEQGTRVFGYLNSF 270 (420)
T ss_pred HHHHHHHhccCcchHHHHHHHHH
Confidence 7776543 5555666665543
No 90
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.81 E-value=6.1e-18 Score=159.98 Aligned_cols=249 Identities=19% Similarity=0.239 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
.++.+.++..++..+.....+-+..+..-|+..++++..+..+...+.++++|.++||++||++++.+-++.++..++.+
T Consensus 14 ~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~ 93 (524)
T PF05977_consen 14 RLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLA 93 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666666666666666899999999999999999999999999999999999999988776654444
Q ss_pred hh---hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 188 VA---AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 188 ~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
+. ...+.|.+++.-++.|++.+...|+..+++.|..|+++...++++.+...++..++||.++|.+....|-.++|+
T Consensus 94 ~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~ 173 (524)
T PF05977_consen 94 VLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFL 173 (524)
T ss_pred HHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 32 223788999999999999999999999999999999999999999999999999999999999999889899999
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
+.++..++..+++..+.++.+..+ . ..+.- .......++-+.++|.+....+..++..+....+...+
T Consensus 174 inalsfl~~i~~l~~~~~~~~~~~-~--~~e~~---------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLl 241 (524)
T PF05977_consen 174 INALSFLISILALLRWKPPPPPSS-L--PRERF---------FSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALL 241 (524)
T ss_pred HHHHHHHHHHHHHHHccccccccc-c--chhhh---------hhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence 888765555444444333221111 1 11100 00113345556667777766666666666666677788
Q ss_pred HHHHHHhcCCChhhhhhhhhheee
Q 017461 345 PTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 345 ~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
|.+.++.+|.++...|++.+..++
T Consensus 242 Pl~a~~~l~~~a~~yGll~a~~gv 265 (524)
T PF05977_consen 242 PLFARDVLGGGASGYGLLLAAFGV 265 (524)
T ss_pred hHHHHHHhCCcHHHHHHHHHHHHH
Confidence 999999899999999998876653
No 91
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.80 E-value=1.2e-18 Score=167.42 Aligned_cols=151 Identities=21% Similarity=0.245 Sum_probs=136.8
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhc
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
.+.+..+.....+..+++.+|.++|++++|+++||+|||+++++++++..++.++.++++ |++.+++.|+++|++.++
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--~~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--NYWMFLIFRFLSGFFGSG 187 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhccc
Confidence 355667888899999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCC
Q 017461 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
....+..+++|++++++|+.+..+ ......++.+++.+++++.. +||+.+++..++.++.+++ +++.+|+++.
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rw 260 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRW 260 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHH
Confidence 999999999999999999999999 77777778888888888877 8999999999888877666 5556677764
No 92
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.80 E-value=2.3e-17 Score=152.77 Aligned_cols=243 Identities=11% Similarity=0.042 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHH--HHHHHHHHHHHHHHHHH-hhhhhCCchhHHHHHHHH-HH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLI--QSSFFWGYLLTQIAGGI-WADTVGGKAVLGFGVVWW-SI 181 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~~~~~~~~~-~i 181 (371)
+..++..++..+.......+.+|.+.++.|.+.+++|++ .+...+...+.+|+++. ..||+||||..++++.+. ++
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~ 82 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSA 82 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHH
Confidence 455667778888888889999999999999999999997 46667888888888855 799999999976665432 22
Q ss_pred HHHHhh---hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 182 ATALTP---VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 182 ~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.....+ .... ...+++...++.++..+...+....+..|..++++++.+.+....+..+|.++|+.+.+++.+.+|
T Consensus 83 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g 161 (390)
T TIGR02718 83 CLASLALVGPDVA-GAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG 161 (390)
T ss_pred HHHHHHcCCcchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 222222 2221 233445555666677777888888899999988888989999988889999999999999999999
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHH
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (371)
||..|++.+++.++..+..++..++++.+++ ... ....++++++|+|.++...+..++......
T Consensus 162 w~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~ 225 (390)
T TIGR02718 162 QRPAFLLVACVPLASLVCVLWLKDRAVASPE-APL---------------ARRASLFRFFRRPLAWSLLALALLSAMTAV 225 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCcCccc-cch---------------hhHHHHHHHHcCcCHHHHHHHHHHHHHHHH
Confidence 9999999998887766665555444322111 000 012346678999998888888888888788
Q ss_pred HHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 339 ILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 339 ~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
....+.+.|+.+ .|+++.++|.+....
T Consensus 226 ~~~~~~~~~l~~-~G~s~~~ig~~~~~~ 252 (390)
T TIGR02718 226 SGFGLSKLYLVD-AGWPLEWIGRLGMAG 252 (390)
T ss_pred HHHHHhhHHHHh-cCCCHHHHHHHHhHH
Confidence 888899999988 699999999987654
No 93
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=3.1e-17 Score=141.95 Aligned_cols=188 Identities=16% Similarity=0.258 Sum_probs=167.3
Q ss_pred cccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHH
Q 017461 96 WEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 175 (371)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 175 (371)
....+.+|...+.....++...+-....+.+.|.+.+.+|.+..+..++......|..+++..+|.++|++|||+.+.+.
T Consensus 70 igfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T 149 (528)
T KOG0253|consen 70 IGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLT 149 (528)
T ss_pred cCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhh
Confidence 34567788888888888888877777778888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 176 VVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 176 ~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
.+...+...+.+.++ |+..+++.|.+.|+|.|+ .|...++-.|..|..+|+..+=+. ..+.+|.++...+...++.
T Consensus 150 ~l~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~ 225 (528)
T KOG0253|consen 150 FLVTGVFGVISGASP--NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS 225 (528)
T ss_pred HHHHHHHHHhhcCCC--CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 999999999999999999 788889999999999998877666 9999999999999999999
Q ss_pred ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 256 RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 256 ~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
++||||.+.... ..+..+..+.++.+|+++..
T Consensus 226 ~~gwr~~l~~~~-~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 226 NFGWRYLLFTSS-TPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred hhhHHHHHHHHH-hHHHHHHHHHhhcccCcchh
Confidence 999999888777 44455566677889988754
No 94
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.77 E-value=8.2e-17 Score=153.20 Aligned_cols=164 Identities=18% Similarity=0.235 Sum_probs=133.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~ 185 (371)
.+++..+...+..+.+...++. +.+++|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 25 ~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 25 LIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3444444455555555555444 678999999999999888877777777899999999 59999999999999999999
Q ss_pred hhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcc--hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHH
Q 017461 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE--RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (371)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 263 (371)
++++.+ +.+.++++++++|+|.|...+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+.+|||+.|
T Consensus 105 ~~~~~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F 183 (500)
T PRK09584 105 VAWSGH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAF 183 (500)
T ss_pred HHHhcc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 988741 45667788999999999988999999999997643 456788899999999999999999999999999999
Q ss_pred HHHhHHHHH
Q 017461 264 YSFGSLGTV 272 (371)
Q Consensus 264 ~~~~~~~~~ 272 (371)
++.++..++
T Consensus 184 ~i~~i~~~i 192 (500)
T PRK09584 184 ALSVVGMLI 192 (500)
T ss_pred HHHHHHHHH
Confidence 987754444
No 95
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=2.2e-18 Score=153.27 Aligned_cols=263 Identities=14% Similarity=0.151 Sum_probs=189.2
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhc-C-------CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC
Q 017461 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEF-N-------WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG 168 (371)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr 168 (371)
...+++...+.+..++.+.+.++..+++.+.+.+...| | +++...+.+..+..+|.++|+++.|++.||+||
T Consensus 34 g~qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 34 GLQWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred chhHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 44667788888999999999999999999998887655 2 445667889999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhhhhhcc-----ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHH
Q 017461 169 KAVLGFGVVWWSIATALTPVAAKL-----GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGS 243 (371)
Q Consensus 169 r~~~~~~~~~~~i~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~ 243 (371)
|+++...++++.++++++++.... -++++...|++.|+|.|+-+|+..++.+|....++||...+.+....+.|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999977776421 267888899999999999999999999999999999999999888888888
Q ss_pred HHHHHhHHHHhcc---------------cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCC--ChHHHHH--------
Q 017461 244 VTGLAFSPFLIHR---------------FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL--RPAEKKL-------- 298 (371)
Q Consensus 244 ~~g~~~~~~l~~~---------------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-------- 298 (371)
..|.+++-.+..- .=||..|.+.++++++.+..-+ ..||+++...-. +.+....
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~~ 272 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLSV 272 (538)
T ss_pred hhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhcccccccc
Confidence 8877776655321 1289888887766665544333 345555433000 0000000
Q ss_pred -Hhhh--ccCCCCcccc---hhhhhhcC---hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhh
Q 017461 299 -IVSS--CASKEPVKTI---PWGLILSK---PPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSE 361 (371)
Q Consensus 299 -~~~~--~~~~~~~~~~---~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~ 361 (371)
..++ .....+.+.. .+...+.. +.+...+..+|+...++|....+....++. .|+.+....+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~-ig~~~~~~~~ 343 (538)
T KOG0252|consen 273 DIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA-IGVIPSANTY 343 (538)
T ss_pred ccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHh-hccCCCcchH
Confidence 0000 0000010111 12222222 456678888899999999999998888887 4666554443
No 96
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.76 E-value=1e-17 Score=157.49 Aligned_cols=230 Identities=15% Similarity=0.109 Sum_probs=168.6
Q ss_pred hhhhhh-hhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCc-hhHHHHHHHHHHHHHHhhhhhcc-
Q 017461 120 RVNMSI-AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGK-AVLGFGVVWWSIATALTPVAAKL- 192 (371)
Q Consensus 120 ~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~~- 192 (371)
...+.. ..+.+.+++|+++.++|++.++..+..++..|+.|+++|| +||| +.++++.++++++.+++.+.++.
T Consensus 15 ~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~ 94 (437)
T TIGR00792 15 FAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFS 94 (437)
T ss_pred HHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCC
Confidence 333443 4555778899999999999999999999999999999998 6774 46778888888888887776521
Q ss_pred ---ChhHHHHHHHHHHhhhhchhhhHHHHHhccc-CCcchHHHHHHHHHHHHHHHHHHHHhHHHHh-------cccCchh
Q 017461 193 ---GLPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLI-------HRFGWPS 261 (371)
Q Consensus 193 ---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-------~~~gw~~ 261 (371)
..+.+++.+++.+++.+...+...++..|.. ++++|++..++...+..+|.++++.+.+.+. +..|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~ 174 (437)
T TIGR00792 95 ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFM 174 (437)
T ss_pred cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHH
Confidence 1456777788899998888788888889987 4689999999999888888887776665554 2468999
Q ss_pred HHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHH
Q 017461 262 VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILL 341 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 341 (371)
.+++.+++.++..++.++..+|++.+.+... +++......++.++++|.++...+..++...+.+...
T Consensus 175 ~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 242 (437)
T TIGR00792 175 FALVLALIGVVSLIICFFGTKERYSEIPKNI------------EKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKN 242 (437)
T ss_pred HHHHHHHHHHHHHHHHHcCCEecCCCCCccc------------ccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999888877777666666542211100 0001112356778899999988888888877777776
Q ss_pred HhhHHHHHHhcCCChhhhhhh
Q 017461 342 TWMPTYYNQVSSFGSKTLSET 362 (371)
Q Consensus 342 ~~~~~~l~~~~g~s~~~~~~~ 362 (371)
.+.+.|.+..++ ++...+.+
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~ 262 (437)
T TIGR00792 243 GVQVYYFTYVLG-DPELFSYM 262 (437)
T ss_pred chhheeEeeecC-ChHHHHHH
Confidence 666666665555 34444443
No 97
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=4.4e-17 Score=154.93 Aligned_cols=264 Identities=16% Similarity=0.204 Sum_probs=210.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
.+.++.+..+...+....+...+..+.+.|+++.++.|++.+.+-++..+...+..+..-|..|-+.+-+|+++++++.+
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsl 177 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSL 177 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHH
Confidence 34455556666666667777888899999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhh-----------------------------------------------ccC--hh-HHHHHHHHHHhhhhchhhh
Q 017461 185 LTPVAA-----------------------------------------------KLG--LP-FLLVVRVFMGIGEGVAMPA 214 (371)
Q Consensus 185 ~~~~~~-----------------------------------------------~~~--~~-~l~~~r~l~G~~~~~~~~~ 214 (371)
++++-+ ..+ +| .++++.++.|+|....++.
T Consensus 178 l~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl 257 (735)
T KOG3626|consen 178 LFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL 257 (735)
T ss_pred HHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC
Confidence 988752 000 33 6677799999999999999
Q ss_pred HHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc------------------C-chhHHHHHhHHHHHHHH
Q 017461 215 MNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------------------G-WPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------------------g-w~~~f~~~~~~~~~~~~ 275 (371)
+.+|+-|....++-+.++|+......+|.++|-++++++...+ | |..-|++.+.+.++..+
T Consensus 258 GisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~ 337 (735)
T KOG3626|consen 258 GISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAV 337 (735)
T ss_pred CCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999886421 2 66667788888888888
Q ss_pred HHhhcccCCCCCCCCCChHHHHHHhhhcc--CCCC-------cccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHH
Q 017461 276 VWLSKAHSSPAEDPQLRPAEKKLIVSSCA--SKEP-------VKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPT 346 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (371)
.++++.++.|...++...++.+....+.. ..+. .....++.+++||.+...+++..+....+.++.+|+|.
T Consensus 338 p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPK 417 (735)
T KOG3626|consen 338 PLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPK 417 (735)
T ss_pred HHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHH
Confidence 88877777665543322222111111111 0111 11334667899999999999999999999999999999
Q ss_pred HHHHhcCCChhhhhhhhhheee
Q 017461 347 YYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 347 ~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
|++..+|.++..+..++..+++
T Consensus 418 yLE~Qfg~sas~An~l~G~i~v 439 (735)
T KOG3626|consen 418 YLETQFGISASLANILTGSIGV 439 (735)
T ss_pred HHHHHcCCCHHHHHHHhhhhhh
Confidence 9999999999999998866554
No 98
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.75 E-value=1.5e-16 Score=148.38 Aligned_cols=224 Identities=11% Similarity=-0.019 Sum_probs=153.2
Q ss_pred HHHHHHHhhhhhh-hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC-chhHHHHHHHHHHHHHHhhh
Q 017461 111 SAFLLCNMDRVNM-SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTPV 188 (371)
Q Consensus 111 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~ 188 (371)
+.++..+....++ +++.+.+.+++|++..++|++.+++.++..++++++|.++||+|+ |+++.++.++.+++..+..+
T Consensus 9 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~ 88 (418)
T TIGR00889 9 FMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQ 88 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455555 455566788899999999999999999999999999999999965 77888888888888888888
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHh--------cccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS--------KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
.+ +++.+++.|++.|++.+...+...++.. |......|.+..| .+|.++||.+++.+....+|.
T Consensus 89 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~ 160 (418)
T TIGR00889 89 VT--TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI 160 (418)
T ss_pred hc--CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH
Confidence 88 8999999999999987777666555432 2222223444444 468888899888874433454
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFIL 340 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 340 (371)
+|++.+++.++..++ .+..||.+..+++++.... +......++++|+|+++.+.+..++........
T Consensus 161 -~f~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~-----------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 227 (418)
T TIGR00889 161 -QLYITAGSSALLGVF-ALTLPDIPVAKSTAKMSIK-----------VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQIT 227 (418)
T ss_pred -HHHHHHHHHHHHHHH-HhcCCCCCCCccccccCHH-----------HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHH
Confidence 355666655555544 3455665432211110000 000123456889999888888877777666667
Q ss_pred HHhhHHHHHHhcCCCh
Q 017461 341 LTWMPTYYNQVSSFGS 356 (371)
Q Consensus 341 ~~~~~~~l~~~~g~s~ 356 (371)
..+++.|+++ .|.++
T Consensus 228 ~~~~~~~~~~-~g~~~ 242 (418)
T TIGR00889 228 NIFGNGFLHE-FGRNP 242 (418)
T ss_pred HHhHHHHHHH-hcccc
Confidence 7888888877 46554
No 99
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.74 E-value=6.5e-16 Score=143.93 Aligned_cols=233 Identities=17% Similarity=0.118 Sum_probs=169.6
Q ss_pred HhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh----hhCCchhHHHH-HHHHHHHHHHhhhhhc
Q 017461 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAVLGFG-VVWWSIATALTPVAAK 191 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~~~~~~~~~~ 191 (371)
.+......+..+.+.+++|.+....+++..+..+...+.+|+.|.++| |+|||+.++++ .+..+++.++.++++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~- 95 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAA- 95 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCc-
Confidence 344455556666778899999999999999999999999999999999 59999998874 666667777777766
Q ss_pred cCh-----------------hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcch--HHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 192 LGL-----------------PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER--SRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 192 ~~~-----------------~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
+. +.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++++
T Consensus 96 -~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 96 -DIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred -hhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2333444455567777888889999999998865 689999999999999999999987
Q ss_pred H--hccc-------------CchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhh
Q 017461 253 L--IHRF-------------GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLI 317 (371)
Q Consensus 253 l--~~~~-------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 317 (371)
+ .+.+ +.|+.|++.+++.++..++..+..+|.+....+...+++ .++.++. .....++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~i 249 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE----AAPPSKH-GEEAFFGEL 249 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh----ccccccc-chhhhHHHH
Confidence 5 2211 568899998888888888888888887643221111000 0000010 111233444
Q ss_pred hcC-----hhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-hcCCCh
Q 017461 318 LSK-----PPVWALIVSHFCHNWGTFILLTWMPTYYNQ-VSSFGS 356 (371)
Q Consensus 318 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~ 356 (371)
++. +.++.+++..++.+++++.+..|.+.|+.+ .++-++
T Consensus 250 ~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~ 294 (477)
T TIGR01301 250 FGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSV 294 (477)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCC
Confidence 432 668899999999999999999999998864 565443
No 100
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.72 E-value=6.6e-17 Score=126.82 Aligned_cols=137 Identities=23% Similarity=0.417 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccC
Q 017461 145 QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP 224 (371)
Q Consensus 145 ~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 224 (371)
.+.+.++..++.++.|++.||+|||+.+.++..+..++.++..+.+ +++.+++.+++.|++.+...+....++.|.+|
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--NITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 3456788899999999999999999999999999999999888888 89999999999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccC
Q 017461 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (371)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 283 (371)
+++|++..++......+|..+++.+++.+.+..+|++.|++.+++.++..+..++..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999998999999999888877777776665554
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.72 E-value=5e-16 Score=145.28 Aligned_cols=164 Identities=15% Similarity=0.220 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~ 185 (371)
.++...+...+..+.+...+|. +.+++|++..+.+.+.+.+.....++.+++|+++||+ |||++++++.++.+++.++
T Consensus 13 ~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~ll 92 (493)
T PRK15462 13 YVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVV 92 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHH
Confidence 3344444455555556555655 5677999999999999999999999999999999999 9999999999999999877
Q ss_pred hhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCc--chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHH
Q 017461 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (371)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 263 (371)
++.... +...++++..+.++|.|...+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+.+||++.|
T Consensus 93 l~~~~~-~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F 171 (493)
T PRK15462 93 LGASEI-HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGF 171 (493)
T ss_pred HHHhhc-chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHH
Confidence 765431 2233445555566777777787889999999875 7999999999999999999999999999999999999
Q ss_pred HHHhHHHHH
Q 017461 264 YSFGSLGTV 272 (371)
Q Consensus 264 ~~~~~~~~~ 272 (371)
.+.++..++
T Consensus 172 ~iaaigm~l 180 (493)
T PRK15462 172 GLAAVGMIA 180 (493)
T ss_pred HHHHHHHHH
Confidence 987654333
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.72 E-value=3.1e-20 Score=175.31 Aligned_cols=177 Identities=20% Similarity=0.184 Sum_probs=145.4
Q ss_pred HHHHHHHHhhhhhhhhhhhhhh--hhcCCC---------cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 110 FSAFLLCNMDRVNMSIAILPMS--AEFNWN---------PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
.++.+..+++...++...+... ..+..+ ..+.+++.+...+|..+|+++.|.++||+|||+.+.++.++
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~ 85 (451)
T PF00083_consen 6 SLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALL 85 (451)
T ss_pred HHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccccc
Confidence 3444677777776665555443 222222 23468999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhcc-ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 179 WSIATALTPVAAKL-GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 179 ~~i~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
..++.++.++++.. |++.++++|++.|++.|+..+....++.|..|+++|++..++.+.+..+|.+++..++..+....
T Consensus 86 ~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 165 (451)
T PF00083_consen 86 MIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS 165 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999998743 68999999999999999999999999999999999999999999999999999988876654433
Q ss_pred ---CchhHHHHHhHHHHHHHHHHhhcccCCCCC
Q 017461 258 ---GWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (371)
Q Consensus 258 ---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
+||+.+++.++++++..+.. .+.||+|+.
T Consensus 166 ~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~w 197 (451)
T PF00083_consen 166 DNWGWRILLIFGAIPSLLVLLLR-FFLPESPRW 197 (451)
T ss_pred ccccccccccccccccccccccc-cccccccce
Confidence 49999999888877655544 667888764
No 103
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.69 E-value=1.5e-15 Score=141.69 Aligned_cols=162 Identities=17% Similarity=0.229 Sum_probs=135.8
Q ss_pred hhhhhhhhhcCCCc--------chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc--Ch
Q 017461 125 IAILPMSAEFNWNP--------ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL--GL 194 (371)
Q Consensus 125 ~~~~~~~~~~~~~~--------~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~ 194 (371)
...+.+.++.|.++ ...+.+.++..++..++.++.|+++||+|+|+++.++.++.+++.++....... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 44455555665443 567999999999999999999999999999999999999998887777664210 24
Q ss_pred hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhcc------cCchhHHHHHh
Q 017461 195 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHR------FGWPSVFYSFG 267 (371)
Q Consensus 195 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~------~gw~~~f~~~~ 267 (371)
+.+++.+++.|++.+...+....++.|++|+++|++++|+.+ ....+|.++||+++|.+.++ +||+..|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 567778999999999888888999999999999999999997 67889999999999999987 46999999999
Q ss_pred HHHHHHHHHHhhcccCCCC
Q 017461 268 SLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~ 286 (371)
++.++..++.+++.+|+..
T Consensus 389 ~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHhCCccc
Confidence 9988888888888876633
No 104
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.69 E-value=2.4e-18 Score=163.23 Aligned_cols=255 Identities=15% Similarity=0.175 Sum_probs=3.0
Q ss_pred HHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh---
Q 017461 114 LLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA--- 190 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--- 190 (371)
++..+........+..+++.|+++.++.|++.+.+-++.++..++..++.+|..|-+.+.+|.+++++|++++++-+
T Consensus 13 ~~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 13 LFQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 33355666677888899999999999999999999999999999999999998888999999999999998876532
Q ss_pred ---------------------c------------------------cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCC
Q 017461 191 ---------------------K------------------------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV 225 (371)
Q Consensus 191 ---------------------~------------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 225 (371)
. .-+..++++.++.|+|....++++.+|+-|..++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 0 0156788889999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHHHhcc---------------------cC-chhHHHHHhHHHHHHHHHHhhcccC
Q 017461 226 AERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------------FG-WPSVFYSFGSLGTVWFTVWLSKAHS 283 (371)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------------~g-w~~~f~~~~~~~~~~~~~~~~~~~~ 283 (371)
++-+.++|++.....+|.++|-++++.+... .| |..-|++.+++.++..+.++.++++
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~ 252 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKK 252 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999999999999876542 12 6566677777777777777766665
Q ss_pred CCCCCCCCChH---HHH---HH-hhhccC--------CCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 017461 284 SPAEDPQLRPA---EKK---LI-VSSCAS--------KEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYY 348 (371)
Q Consensus 284 ~~~~~~~~~~~---~~~---~~-~~~~~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 348 (371)
-|...+..... +.+ .. .+..+. .-+.-....+.+++||.+....++..+......++.+++|.|+
T Consensus 253 lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKyl 332 (539)
T PF03137_consen 253 LPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYL 332 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55541111000 000 00 000000 0122234567789999999999999999999999999999999
Q ss_pred HHhcCCChhhhhhhhhheee
Q 017461 349 NQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 349 ~~~~g~s~~~~~~~~~~~~~ 368 (371)
+..++.++.+++++.....+
T Consensus 333 E~QF~~sas~A~~l~G~v~i 352 (539)
T PF03137_consen 333 ESQFGLSASQASLLTGIVSI 352 (539)
T ss_dssp --------------------
T ss_pred HHHhCCCHHHHHHHHhhhhc
Confidence 99999999999988765543
No 105
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.69 E-value=5.5e-15 Score=135.45 Aligned_cols=258 Identities=16% Similarity=0.172 Sum_probs=185.7
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhh--cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC-chhHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFG 175 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~ 175 (371)
.+.+|+.+.++.+..++.....+++.+..-++.++ .+.+.+..|++.++..++.+++++..|++..|.+. |+.++.+
T Consensus 29 ~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 29 RKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred cCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 34567788888888888888888877776555555 66678889999999999999999999999999996 8899999
Q ss_pred HHHHHHHHHHh-hhhh--ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 176 VVWWSIATALT-PVAA--KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 176 ~~~~~i~~~~~-~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
.++.++|.++. ++.. +...+.++++|++.|+|.|. ....-+|+++....++|.++++....+..+|.++||.++.+
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999998 4432 12578999999999999774 57788999998888999999999999888999999888876
Q ss_pred Hhcc--cC-----------chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhc
Q 017461 253 LIHR--FG-----------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILS 319 (371)
Q Consensus 253 l~~~--~g-----------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 319 (371)
+... .| +..+-|+.+++.++.++.+.++.+|..+...+++.++.++...+ .++.+..+.++
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~----- 261 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSVEEEKSD-IEKVKKPKLDW----- 261 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccchhhccc-hhhhccCChhH-----
Confidence 6531 11 24566888888888888888888887776544433222100000 00011111111
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 320 KPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
+..+...+..+...+.+....+..+.+....++++..++.....
T Consensus 262 -~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~g 305 (488)
T KOG2325|consen 262 -VAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNG 305 (488)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhh
Confidence 22234444555556666666777777777667877766655443
No 106
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.68 E-value=3.4e-15 Score=133.20 Aligned_cols=259 Identities=13% Similarity=0.125 Sum_probs=204.5
Q ss_pred cccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHH
Q 017461 96 WEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG 175 (371)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~ 175 (371)
.+..++||.+++++.+..+.+.+....+++...+....|| +.+..-|+..+|++.+....+++-|+.|++|-|..++++
T Consensus 37 ~rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 37 HRVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 4678899999999999999998888888888888888999 888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhcc----Chh--HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHh
Q 017461 176 VVWWSIATALTPVAAKL----GLP--FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF 249 (371)
Q Consensus 176 ~~~~~i~~~~~~~~~~~----~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~ 249 (371)
..+.++|..+-..+... .++ ..+++..+.++++-.+...-..+..-||++++|..+..+-.++..+|.++|.++
T Consensus 116 t~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ll 195 (480)
T KOG2563|consen 116 TVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLL 195 (480)
T ss_pred HHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhc
Confidence 99999999887766421 345 778899999999888888878889999999999999999999999999999888
Q ss_pred HHHHhccc------Cchh--HHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcCh
Q 017461 250 SPFLIHRF------GWPS--VFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKP 321 (371)
Q Consensus 250 ~~~l~~~~------gw~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 321 (371)
...+..+- .|.. .|+..+.++.+.+++..+..+++|..++........ +..-....+.+++++
T Consensus 196 ppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~---------~~~f~~si~~~~~n~ 266 (480)
T KOG2563|consen 196 PPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQ---------DASFPKSIKSCFKNR 266 (480)
T ss_pred cceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhh---------cCcHHHHHHHHHcCc
Confidence 88776543 3533 455555555555566666666655554433322221 111245678899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhh
Q 017461 322 PVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~ 365 (371)
+|.++.+++......+++..+.+..-+.. .|++...+|++...
T Consensus 267 ~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l 309 (480)
T KOG2563|consen 267 QFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGAL 309 (480)
T ss_pred cHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHH
Confidence 99999999999998889888888766655 47776666665443
No 107
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.68 E-value=1.1e-15 Score=140.55 Aligned_cols=150 Identities=11% Similarity=0.069 Sum_probs=129.2
Q ss_pred hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHH
Q 017461 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 203 (371)
....+.+.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.+..+.+.+++..++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (377)
T TIGR00890 225 IGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVAL 304 (377)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHH
Confidence 34455567788988889999999999999999999999999999999999999999988888777662223345566788
Q ss_pred HHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
.|++.+...+....++.|.+|+++|+++.|+......+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 305 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 305 VFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 8988888888888899999999999999999999999999999999999999999999999887766654
No 108
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.67 E-value=1.1e-15 Score=143.11 Aligned_cols=149 Identities=10% Similarity=0.074 Sum_probs=131.0
Q ss_pred hcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchh
Q 017461 133 EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAM 212 (371)
Q Consensus 133 ~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 212 (371)
+.+.+..+.|++.++..++..++.+++|++.||+|+|+.+.++.++.+++.++.++++ +.+.+++.+++.|++.+...
T Consensus 256 ~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--~~~~~~~~~~l~g~~~~~~~ 333 (420)
T PRK09528 256 TPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--GPLEVSILKLLHAFEVPFLL 333 (420)
T ss_pred ccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHH
Confidence 3466677889999999999999999999999999999999999999999988888888 89999999999999988888
Q ss_pred hhHHHHHhcccCCcchHHHHHH-HHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccC
Q 017461 213 PAMNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHS 283 (371)
Q Consensus 213 ~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 283 (371)
+....++.|.+|++.|+...+. ++....+|.++++.++|++.+..||+..|++.+++.++..++.++..++
T Consensus 334 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 334 VGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8888999999999998887665 6777889999999999999999999999999888877776666655554
No 109
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.67 E-value=8.4e-15 Score=136.09 Aligned_cols=157 Identities=17% Similarity=0.165 Sum_probs=132.9
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
.....+.+.++.|. ...++..+.+.++..++.++.|++.||+|+|+.+.++.++.+++.++..+.+ +.+.+++..+
T Consensus 235 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (399)
T PRK05122 235 IATFITLYYAARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--SPWMALIGAA 310 (399)
T ss_pred HHHHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHH
Confidence 33445554455565 3456777888899999999999999999999999999998888888888887 8888888999
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhccc
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 282 (371)
+.|++.+...+.....+.|.+|+++|+++.+++.....+|..+++.+.|.+.+..||++.|++.+++.++..++.++..+
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999998888888888899999999999999999999999999999999999999999999988887777666655544
Q ss_pred C
Q 017461 283 S 283 (371)
Q Consensus 283 ~ 283 (371)
+
T Consensus 391 ~ 391 (399)
T PRK05122 391 R 391 (399)
T ss_pred c
Confidence 3
No 110
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=9.6e-15 Score=135.38 Aligned_cols=155 Identities=13% Similarity=0.089 Sum_probs=128.1
Q ss_pred hhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 123 ~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
+....|. +++++|++..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+......+.+ +.+.+++.+
T Consensus 235 ~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~ 312 (393)
T PRK15011 235 YIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--SPAILLGLQ 312 (393)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 3344554 5677899999999998888888888999999999999999988877766666655555566 788888899
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 280 (371)
++.+++.|...+....+..|.+| ++|+++.++++....+|..+++.++|.+.+..||+..|++.+++.++.+++.++.
T Consensus 313 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 313 LLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99988888777777888899997 5699999999999999999999999999999999999998887777766555543
No 111
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.66 E-value=7.6e-15 Score=143.77 Aligned_cols=139 Identities=11% Similarity=0.043 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcc
Q 017461 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (371)
Q Consensus 143 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 222 (371)
+...+..++..++.++.|+++||+|||++++++.++.+++.++.++.+ +.+.+++++++.|++.+..++...++++|+
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~--s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN--SESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566788999999999999999999999999999999999999998 888888889999998888899999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
+|.+.|++++|+......+|.++||++++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 9999999999999999999999999999988764 4567787777776666555554 46543
No 112
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.66 E-value=2.6e-14 Score=136.23 Aligned_cols=170 Identities=12% Similarity=0.101 Sum_probs=126.0
Q ss_pred hhhhhhhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH-hhhhhccChh
Q 017461 118 MDRVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAAKLGLP 195 (371)
Q Consensus 118 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~~~~~~~~~ 195 (371)
...+.+....|.+ .+++|.+..+.+++.+...++..++.++.|+++||+|||+++.++.++..++.+. .......+..
T Consensus 264 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (490)
T PRK10642 264 VTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIG 343 (490)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 3444455566765 4678988888888888889999999999999999999999988887654443322 2222211577
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-CchhHHHHHhHHHHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLGTVWF 274 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~~~~~ 274 (371)
.+++++++.|++.+........++.|.+|++.|++++|+......+++.++|.+.+++.+.. +|+.++++..+++++.+
T Consensus 344 ~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 344 LIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 78888999998887777778888999999999999999855555666788999999888754 47777776666666555
Q ss_pred HHHhhcccCCCCCC
Q 017461 275 TVWLSKAHSSPAED 288 (371)
Q Consensus 275 ~~~~~~~~~~~~~~ 288 (371)
+..+ +.||+++..
T Consensus 424 ~~~~-~~pes~~~~ 436 (490)
T PRK10642 424 ITGV-TMKETANRP 436 (490)
T ss_pred HHHH-HhccccCCC
Confidence 5544 457776643
No 113
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.65 E-value=1.1e-14 Score=132.23 Aligned_cols=164 Identities=24% Similarity=0.371 Sum_probs=146.2
Q ss_pred HHHHhhhhhhhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCch-hHHHHHHHHHHHHHHhhhhhc
Q 017461 114 LLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKA-VLGFGVVWWSIATALTPVAAK 191 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~~ 191 (371)
+.............+.+.++ +|.+..+.+++.+...++..++.++.|++.||+|||+ .+.++.++..++.++..+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~- 263 (352)
T cd06174 185 FLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP- 263 (352)
T ss_pred HHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-
Confidence 33444445555666666555 4889999999999999999999999999999999999 99999999999999999988
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHH
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~ 271 (371)
+.+.+++..++.|++.+...+....++.|..|+++|++.+++......+|..+++.+.+.+.+..||++.+++.+++.+
T Consensus 264 -~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~ 342 (352)
T cd06174 264 -SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALAL 342 (352)
T ss_pred -cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999998999999999998888
Q ss_pred HHHHHHhh
Q 017461 272 VWFTVWLS 279 (371)
Q Consensus 272 ~~~~~~~~ 279 (371)
+..++.++
T Consensus 343 i~~i~~~~ 350 (352)
T cd06174 343 LAALLLLL 350 (352)
T ss_pred HHHHHhee
Confidence 77665543
No 114
>PRK12382 putative transporter; Provisional
Probab=99.65 E-value=2.2e-14 Score=133.00 Aligned_cols=155 Identities=19% Similarity=0.198 Sum_probs=132.7
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
.....+.+.++.+.+ ..++..+.+.++..+++++.|++.||+|+|+.+.++..+.+++.++..+.+ +.+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 310 (392)
T PRK12382 235 IGTFVSLYFASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--TAWVALAGAA 310 (392)
T ss_pred HHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--cHHHHHHHHH
Confidence 444455555566654 356667778888899999999999999999999999999999888888887 8888888999
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcc
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
+.|++.+...+...+.+.|.+|+++||++.|++.....+|..++|.+.+.+.+..||++.|++.+++.++..++.+++.
T Consensus 311 l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 311 LTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999888888888999999999999999999999999999999999999999999999999888777766665543
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.64 E-value=1.7e-14 Score=134.44 Aligned_cols=157 Identities=15% Similarity=0.022 Sum_probs=131.1
Q ss_pred hhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 122 NMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
......|.+.++.|.+..+.+++.+.+.++..++.++.|++.||+|+|+.+.++.+..+++.++..+.+ +.+.+.+..
T Consensus 238 ~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--SFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHH
Confidence 344456777788899999999999999999999999999999999999999888777777777777777 778888888
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHHHHhHHHHHHHHHHhhc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 280 (371)
++.|++.++..+...+++.|.+|+++|++++|+......+|..+||.++|.+.++.+ |...+++.+.+.++..++.++.
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 899998888888899999999999999999999999999999999999999988654 5556665555555544444443
No 116
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.63 E-value=2.4e-14 Score=132.19 Aligned_cols=155 Identities=12% Similarity=0.032 Sum_probs=136.6
Q ss_pred hhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHH
Q 017461 119 DRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 198 (371)
.........|.+.+++|.+..++|++.++..++..++.++.+++.||+|.|+.+.++.++.++..++.++++ +.+.++
T Consensus 220 ~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~ 297 (382)
T TIGR00902 220 AHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--AFPLIF 297 (382)
T ss_pred HHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--hHHHHH
Confidence 333444556666677999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred HHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
+.++++|++.+...+....++.+. |+++|+++.++++ ...++|.++|+.++|.+.+++|+ ..|++.+++.++.+++.
T Consensus 298 ~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 298 LLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998 8999999999986 57889999999999999999997 66888787777654443
No 117
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.63 E-value=8.2e-15 Score=136.52 Aligned_cols=159 Identities=17% Similarity=0.165 Sum_probs=132.8
Q ss_pred hhhhhhhhhhhcCCCcc----hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHH
Q 017461 123 MSIAILPMSAEFNWNPA----TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLL 198 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~ 198 (371)
..+..+.+.++.+.+.. ..+.+.++..++..++.++.|++.||+|||+.+.++.++.+++.+...+.+ +.+.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 315 (408)
T PRK09874 238 IAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--TPLQLG 315 (408)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--cHHHHH
Confidence 34445554444332332 245666777888889999999999999999999999988888888777777 888888
Q ss_pred HHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 199 VVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
+.+++.|++.+...+...+++.+..++++||+.++++.....+|..+||.++|.+.+..||++.|++.+++.++..++.+
T Consensus 316 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 395 (408)
T PRK09874 316 ILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888777666
Q ss_pred hcccC
Q 017461 279 SKAHS 283 (371)
Q Consensus 279 ~~~~~ 283 (371)
+..++
T Consensus 396 ~~~~~ 400 (408)
T PRK09874 396 NSLRR 400 (408)
T ss_pred HHHHH
Confidence 54443
No 118
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.63 E-value=2.3e-14 Score=135.88 Aligned_cols=171 Identities=13% Similarity=0.033 Sum_probs=126.4
Q ss_pred HHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
+++..++............|. +.+++|++..+.++..+...++..++.+++|+++||+|||+.+.+...+..++..+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~ 342 (467)
T PRK09556 263 LCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGV 342 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHH
Confidence 334444444444445566675 5677999999999999999999999999999999999999887766554444332222
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHH-HHHHHHHhHHHHhc-----------
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIH----------- 255 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~----------- 255 (371)
+....+.+.+.+.+++.|++...........+.|.+|++.||.+.|+.+....+ |..++|.+.|.+.+
T Consensus 343 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~ 422 (467)
T PRK09556 343 YQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGY 422 (467)
T ss_pred HHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccc
Confidence 222116666778888888654443334446777999999999999999988886 77999999999999
Q ss_pred -ccCchhHHHHHhHHHHHHHHHHhh
Q 017461 256 -RFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 256 -~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
..||+..|++.+++.++.+++.++
T Consensus 423 ~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 423 TLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred cccChHHHHHHHHHHHHHHHHHHHH
Confidence 578999999887777766555443
No 119
>PRK03545 putative arabinose transporter; Provisional
Probab=99.63 E-value=4.3e-14 Score=130.91 Aligned_cols=152 Identities=15% Similarity=0.066 Sum_probs=125.1
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH-HhhhhhccChhHHHHHHHHHH
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVRVFMG 205 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r~l~G 205 (371)
.+.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|... .+..+..++.. +....+ +.+.++++.++.|
T Consensus 229 ~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~g 305 (390)
T PRK03545 229 EPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAAN--SEWHLSVLSIFWG 305 (390)
T ss_pred HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhc--hHHHHHHHHHHHH
Confidence 3445666899999999999999999999999999999999988654 44444444443 334555 7888888999999
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhccc
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 282 (371)
++.+...+.....+.+..| ++|++++|++.....+|..+||+++|.+.++.|++..|++.+++.++.++..++..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 306 IAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9988777777788888875 688999999999999999999999999999999999999999888877776666554
No 120
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.62 E-value=5.3e-14 Score=129.45 Aligned_cols=150 Identities=12% Similarity=0.058 Sum_probs=127.8
Q ss_pred hhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHH
Q 017461 127 ILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 205 (371)
Q Consensus 127 ~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 205 (371)
.|. +.+++|.++.+.+++.....+...++.++.|++.||+|||+++.++.++..+..+...+.+ +.+.+++.+++.|
T Consensus 222 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g 299 (375)
T TIGR00899 222 MPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--SLWALLMLQLLNA 299 (375)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 444 4677899999999998888778888899999999999999999888877777666666667 7888888899999
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
++.+...+....++.|..|+ +++.+++++.....+|..++|.++|.+.+..||+..|++.+++.++..++..+
T Consensus 300 ~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 300 IFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99998888888899999864 67799999999999999999999999999999999999988877766665543
No 121
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=4e-14 Score=132.32 Aligned_cols=162 Identities=13% Similarity=0.041 Sum_probs=140.2
Q ss_pred hhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 123 MSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 123 ~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
+....|.+.++ +|.+..+.+++.+...++..++.++.+++.||.++++.+..+.++.+++.++..+.+ +++.++++.
T Consensus 242 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 319 (417)
T PRK10489 242 VRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--MWILAVLCL 319 (417)
T ss_pred HHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--hHHHHHHHH
Confidence 34456666555 899999999999999999999999999999998888888888888888888888887 888888889
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
++.|++.+...+...+++.|..|++.||+++|++.....+|..+|+.+.|.+.+.+|++..+++.+++.++..++.+...
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 99999988777788899999999999999999999999999999999999999999999999988887777767666666
Q ss_pred cCCCC
Q 017461 282 HSSPA 286 (371)
Q Consensus 282 ~~~~~ 286 (371)
++.+.
T Consensus 400 ~~~~~ 404 (417)
T PRK10489 400 GELRR 404 (417)
T ss_pred ccccc
Confidence 65443
No 122
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.61 E-value=1.2e-14 Score=137.21 Aligned_cols=257 Identities=9% Similarity=0.019 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC-----CchhHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLGFGVVWW 179 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~~~~~~~ 179 (371)
.+.++...++..++.........+.+.+++|++.++++.+.+...+...+-.+ +|+++||++ ||+.++++.++.
T Consensus 27 ~~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 27 VLAIGLQVLFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHH
Confidence 44455556677777633344556667888999999999999999999888555 999999998 788888887776
Q ss_pred H-HHHHHhhhhhccC-hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHH---HHHHHHHHHHHHHHHHhHHHHh
Q 017461 180 S-IATALTPVAAKLG-LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSL---ALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 180 ~-i~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~---~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
. ++....+..+ + .....+..++.+++.+...++.-+++.|..+ +++.... ++.....++|.++|+.++|.+.
T Consensus 106 ~~~~~~~l~~~~--~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGKV--SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHhccccc--chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 3 4444444434 4 3444458899999999999999999999997 5554433 3334445589999999999999
Q ss_pred cccCchhHHHHHhHHHHHHHHHHhhcccCCCC-CCCCCChHHH--HH-HhhhccCCCCcccchhhhhhcChhHHHHHHHH
Q 017461 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA-EDPQLRPAEK--KL-IVSSCASKEPVKTIPWGLILSKPPVWALIVSH 330 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 330 (371)
+.+||+..|++.+++.++..+ ...+.+|++. ..++..+.+. .. .........++........+++|.++...+..
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~-~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fi 261 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLF-VSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFI 261 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHH-HHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHH
Confidence 999999999999888777633 3445566531 1111000000 00 00000000000022344567788887765555
Q ss_pred HH-HHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhee
Q 017461 331 FC-HNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 331 ~~-~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
++ +.........++ .+..+..|+++.+.|++....+
T Consensus 262 fl~~~~~~~~~~~~f-~~~~~~lG~s~~~~G~~~~~~~ 298 (468)
T TIGR00788 262 FLSYANLPGASGSVF-CATTQCLPGGPSFSGMSKVVGN 298 (468)
T ss_pred HHHHhhcCCCCceeE-EEEcccCCCCcchhhhHHHHHH
Confidence 55 222211111111 1223457999999998876544
No 123
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.61 E-value=1.7e-13 Score=126.14 Aligned_cols=236 Identities=13% Similarity=0.162 Sum_probs=164.7
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC-CchhHHHHHHHHHHHHHHhhhhhc
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-GKAVLGFGVVWWSIATALTPVAAK 191 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~~~~~ 191 (371)
+++.+.....+.+..+.+.++.|++..|+|.+.++..+...++++++|.++||++ +|+++.+..++.++........+
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~- 89 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS- 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3444445555677788888999999999999999999999999999999999986 56777787787777777777777
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHh-HHHHhcccC---chhHHHHHh
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAF-SPFLIHRFG---WPSVFYSFG 267 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~-~~~l~~~~g---w~~~f~~~~ 267 (371)
+++.+++..++..+......+...++..+... +++.-.|-.-..+++|-+++... ++.+....+ ..+.+++.+
T Consensus 90 -~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 166 (400)
T PF03825_consen 90 -SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAA 166 (400)
T ss_pred -cHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHH
Confidence 88989988888888888888888888888874 34444555566666666666443 233333223 234555555
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
++.++.....+ ..|+.|.++..+...+ +....+..+++|+|+++...+..++.......+.++.+.|
T Consensus 167 ~~~~ll~~~~l-~lp~~~~~~~~~~~~~------------~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~y 233 (400)
T PF03825_consen 167 ILSLLLAGFAL-FLPKTPPKRSAKESVK------------KLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIY 233 (400)
T ss_pred HHHHHHHHHHH-hCCCCccccccCCCcc------------cccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444443333 3455442221111100 0112233468999999999899999888999999999999
Q ss_pred HHHhcCCChhhhhhhhhh
Q 017461 348 YNQVSSFGSKTLSETVQV 365 (371)
Q Consensus 348 l~~~~g~s~~~~~~~~~~ 365 (371)
+++..|.+....+.+.++
T Consensus 234 l~~~gg~~~~~~g~~~~l 251 (400)
T PF03825_consen 234 LQELGGYSGSTIGILWAL 251 (400)
T ss_pred HHHcccchhhHHHHHHHH
Confidence 999644777777765543
No 124
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.61 E-value=3.6e-14 Score=134.58 Aligned_cols=182 Identities=12% Similarity=0.056 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT 183 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 183 (371)
..+...++..+.............|.+.+++|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 363 (481)
T TIGR00879 284 RLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICL 363 (481)
T ss_pred HHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 33444444444444444445566788888999999889999999999999999999999999999999999988888887
Q ss_pred HHhhhh---hcc------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 184 ALTPVA---AKL------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 184 ~~~~~~---~~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
++..+. ... +...+....++.+.......+....++.|.+|+++|++++++......+|.+++|.+.+.+.
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 364 FVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred HHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776621 110 12222223333332222334666778899999999999999999999999999999999999
Q ss_pred cccCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
+..||++.|++.++++++.+++.+++.+|.+
T Consensus 444 ~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 444 ESIGVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HhcCccceehhHHHHHHHHHHHHheecccCC
Confidence 9899999999999988888887777666544
No 125
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.60 E-value=9.3e-14 Score=128.33 Aligned_cols=165 Identities=15% Similarity=0.029 Sum_probs=119.7
Q ss_pred HHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh--HH------HHHHHHHHH
Q 017461 112 AFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV--LG------FGVVWWSIA 182 (371)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~--~~------~~~~~~~i~ 182 (371)
..++............|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+. .. ++.++..+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLL 302 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHH
Confidence 333444444445555665 456789999999999999999999999999999999999961 11 111111111
Q ss_pred HHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chh
Q 017461 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPS 261 (371)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 261 (371)
.+.....+ +.+..+...++.+++.+ ..+...+++.|.+|+++|+++.|+......+|..++|.+.+.+.+..| |++
T Consensus 303 ~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~ 379 (399)
T TIGR00893 303 MFATNYVN--IPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAG 379 (399)
T ss_pred HHHhccch--hHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhH
Confidence 12222222 34444444444444544 788999999999999999999999999999999999999999999988 999
Q ss_pred HHHHHhHHHHHHHHHHhh
Q 017461 262 VFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~ 279 (371)
.|++.+++.++..++.++
T Consensus 380 ~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 380 ALMVVAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999888877766555443
No 126
>PRK09669 putative symporter YagG; Provisional
Probab=99.60 E-value=6.3e-14 Score=132.04 Aligned_cols=211 Identities=12% Similarity=0.054 Sum_probs=148.9
Q ss_pred hhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCc-hhHHHHHHHHHHHHHHhhhhhcc----Chh
Q 017461 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGK-AVLGFGVVWWSIATALTPVAAKL----GLP 195 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~~----~~~ 195 (371)
.+...+.+.+|++...+|.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.++....+.. ..+
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~ 110 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKII 110 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHH
Confidence 34555788899999999999999999999999999999998 7875 55556777777777665555411 245
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhccc-CCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-------ccCchhHHHHHh
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-------RFGWPSVFYSFG 267 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~~gw~~~f~~~~ 267 (371)
++++..++.+++..+......++.+|+. ++++|++..++...+..+|..+++.+...+.. ..||+..+.+.+
T Consensus 111 ~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ 190 (444)
T PRK09669 111 YACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMG 190 (444)
T ss_pred HHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHH
Confidence 6666777778777777777889999998 45889988888888888887777765544332 347888888888
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHH
Q 017461 268 SLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTY 347 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (371)
+++++..++.++..+|+...+.+ ++......++.++|||.++.+++..++............+.|
T Consensus 191 ii~~v~~~~~~~~~~e~~~~~~~---------------~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~ 255 (444)
T PRK09669 191 LLGVVLFFCCFFMTKERYTPEVD---------------NSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYY 255 (444)
T ss_pred HHHHHHHHHHhCCeEEecCCCCc---------------CCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 88777766666555554222110 001113456778999999988877776666665444444444
Q ss_pred HHH
Q 017461 348 YNQ 350 (371)
Q Consensus 348 l~~ 350 (371)
.+.
T Consensus 256 ~~~ 258 (444)
T PRK09669 256 VNY 258 (444)
T ss_pred eee
Confidence 443
No 127
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.60 E-value=5.7e-13 Score=116.96 Aligned_cols=225 Identities=16% Similarity=0.185 Sum_probs=156.4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
.+.+-.++...+++ -++..-.+-+++|++..+++.+........++..++.|.++||+|||+.-++.+++.+++++
T Consensus 39 yl~vY~La~~aDWL----QGpY~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl 114 (354)
T PF05631_consen 39 YLLVYLLAMAADWL----QGPYLYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL 114 (354)
T ss_pred HHHHHHHHHHHHHh----hcchhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Confidence 33334444444443 34444455578999999999999999999999999999999999999999999999999886
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHH-Hhccc----CCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhcccC
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI-LSKWV----PVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~----~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.- ..+ +++.++++|++.|++.......-.++ +.|.- |++..+..++... ..+++-.+++.+++..+.+..|
T Consensus 115 ~k-~~~--~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~ 191 (354)
T PF05631_consen 115 TK-HSS--NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG 191 (354)
T ss_pred HH-hcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC
Confidence 54 446 89999999999999999988887765 45543 3333344444333 2344445556666667777655
Q ss_pred c--hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHH
Q 017461 259 W--PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWG 336 (371)
Q Consensus 259 w--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 336 (371)
. ..+|....++.++..+++....+|......+..+..+. ....++.++++|+++.+.++..+.-..
T Consensus 192 ~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~------------~~~a~~~i~~d~ril~LG~~qslFE~s 259 (354)
T PF05631_consen 192 FGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS------------FREAWRAILSDPRILLLGLIQSLFEGS 259 (354)
T ss_pred CCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH------------HHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 4 78899888887777777776666655432222111111 023456678889999888888887777
Q ss_pred HHHHH-HhhHHHH
Q 017461 337 TFILL-TWMPTYY 348 (371)
Q Consensus 337 ~~~~~-~~~~~~l 348 (371)
.+.+. .|.|.+-
T Consensus 260 my~FVflWtPaL~ 272 (354)
T PF05631_consen 260 MYLFVFLWTPALD 272 (354)
T ss_pred HHHheeeeeceec
Confidence 76665 4455543
No 128
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.60 E-value=3.4e-14 Score=135.88 Aligned_cols=150 Identities=12% Similarity=0.135 Sum_probs=119.4
Q ss_pred hhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 123 MSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 123 ~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
....+|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++.++.++.+++.++.......+.+.+.+..
T Consensus 294 ~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 294 IQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445677765 5899999999999999999999999999999999999999998887777666554443321444454555
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
++.++...+..+....++.|.+|+++|++++++......+|..+||+++|.+.+..||+..++..++...+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 55554434445677788999999999999999999999999999999999999999999888766554433
No 129
>PRK03699 putative transporter; Provisional
Probab=99.59 E-value=9.9e-14 Score=128.68 Aligned_cols=158 Identities=11% Similarity=0.120 Sum_probs=131.3
Q ss_pred hhhhhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHH
Q 017461 119 DRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (371)
Q Consensus 119 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l 197 (371)
....+....|.+. +++|++..+.+++.+.+.++..++.++.|+++||+|+|+.+..+..+.++..++....+ +.+.+
T Consensus 220 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~ 297 (394)
T PRK03699 220 AQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHH
Confidence 3344455666654 67899999999999999999999999999999999999999988888777777776677 77777
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
.+..++.|++.+..++...++..+..+ ++++...++...+..+|..++|.+.|.+.+..||+..+++.+++.++.+++.
T Consensus 298 ~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 376 (394)
T PRK03699 298 LYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMC 376 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHH
Confidence 778888999888888888888888775 5567888888889999999999999999999999999998888777765544
Q ss_pred hh
Q 017461 278 LS 279 (371)
Q Consensus 278 ~~ 279 (371)
+.
T Consensus 377 ~~ 378 (394)
T PRK03699 377 IL 378 (394)
T ss_pred HH
Confidence 43
No 130
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.58 E-value=2.8e-13 Score=125.52 Aligned_cols=167 Identities=13% Similarity=0.006 Sum_probs=131.7
Q ss_pred hhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHH
Q 017461 118 MDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFL 197 (371)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l 197 (371)
..........|.+.+++|.+..+.++..+.+.++..++.++.|++.||+|||+.+.++..+.+++.++....+. +...+
T Consensus 219 ~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~ 297 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL-QLPVL 297 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc-hHHHH
Confidence 33444555667766678999999999999999999999999999999999999999988888777766554331 22222
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHHHHhHHHHHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~ 275 (371)
.-++.|++.+...+.......+.++ ++++++..|+.+....++..++|.+.|++.+..| |...|.+.++.+++..+
T Consensus 298 --~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 298 --WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMI 375 (393)
T ss_pred --HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHH
Confidence 2356788888887877777777775 5789999999999999999999999999999876 78888888887777777
Q ss_pred HHhhcccCCCCC
Q 017461 276 VWLSKAHSSPAE 287 (371)
Q Consensus 276 ~~~~~~~~~~~~ 287 (371)
+.+.+.||++.+
T Consensus 376 ~~~~~~~~~~~~ 387 (393)
T PRK09705 376 ITLRFAPARFPQ 387 (393)
T ss_pred HHHHhccccccc
Confidence 777776765543
No 131
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.58 E-value=2.8e-13 Score=125.14 Aligned_cols=150 Identities=15% Similarity=0.127 Sum_probs=125.0
Q ss_pred hhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHH
Q 017461 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFM 204 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~ 204 (371)
..+|.+.++.|.+..+.+++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... . . +.+....++.
T Consensus 221 ~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~--~-~~~~~~~~l~ 295 (381)
T PRK03633 221 GLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S--Q-AAMAPALFIL 295 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h--h-HHHHHHHHHH
Confidence 446777777899999999999999999999999999999999999999988888777665443 2 2 2344567778
Q ss_pred HhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 205 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 205 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
|++.+...+...+.+.|..|+++++.+.+.+....++|.++||.++|.+.+++||++.|++.+++.++..++.++
T Consensus 296 g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 296 GAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHh
Confidence 887777789999999999988888888888888999999999999999999999999999988877766555444
No 132
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.57 E-value=7.5e-16 Score=128.94 Aligned_cols=257 Identities=17% Similarity=0.181 Sum_probs=187.4
Q ss_pred CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHH
Q 017461 99 FPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVV 177 (371)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~ 177 (371)
..+|...+..+++..|-.++..-..+.+..++..+.+++.++..++.++|..-..+..+++|++.|| +|-|...++-+.
T Consensus 39 l~hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~ 118 (459)
T KOG4686|consen 39 LGHRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCI 118 (459)
T ss_pred hhhHHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHH
Confidence 3456677777777777777777777888888999999999999999999999999999999999996 788888888788
Q ss_pred HHHHHHHHhhh---hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 178 WWSIATALTPV---AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 178 ~~~i~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
+..+|.++++. .+ .+|.++.+|++.|+|.-...++.+.++.-||..|+.+.++|+......+|..+--.+.+++.
T Consensus 119 fv~~GqliFa~Ggi~~--aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly 196 (459)
T KOG4686|consen 119 FVFLGQLIFAAGGISH--AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLY 196 (459)
T ss_pred HHHHHHHHHHhchHHH--HHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHH
Confidence 88888877664 45 79999999999999988888888999999999999999999999999999988888888887
Q ss_pred cccCc------hhH---HHHHhHH-HHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhcc--CCCCcccchhhhhhcChh
Q 017461 255 HRFGW------PSV---FYSFGSL-GTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCA--SKEPVKTIPWGLILSKPP 322 (371)
Q Consensus 255 ~~~gw------~~~---f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~ 322 (371)
+..+- ... ....+.. +...+++....--.+.+ .+.+.+.++ ..+..+..+... -.|.
T Consensus 197 ~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~~D~r---------Aerilh~e~g~~Ge~pkLtdv~~--f~pp 265 (459)
T KOG4686|consen 197 DTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGLSDDR---------AERILHLEEGFLGEEPKLTDVNT--FYPP 265 (459)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhH---------HHHHHhhhcCcccCCcccccccc--cCcc
Confidence 75321 111 1111111 11111221111100000 000111100 011111122111 1488
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhheee
Q 017461 323 VWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVCTT 368 (371)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~ 368 (371)
+|.+.+.+++++...+-+.+..|.++++.+|+|+.+++.+.+.+-.
T Consensus 266 fw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~ 311 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYG 311 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhh
Confidence 9999999999999999999999999999999999999998776543
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.57 E-value=8.2e-14 Score=129.45 Aligned_cols=140 Identities=16% Similarity=0.180 Sum_probs=116.5
Q ss_pred hhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH-HhhhhhccChhHHHHHH
Q 017461 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 124 ~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~~r 201 (371)
....|. +.+++|.+..+.+++.+...++..++.++.|++.||+|||+.+.++.++.++..+ +..... +.+.+.++.
T Consensus 258 ~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 335 (405)
T TIGR00891 258 QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGA--NVAVLGLGL 335 (405)
T ss_pred hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCC--chHHHHHHH
Confidence 334444 5667899999999999999999999999999999999999999888776644333 333334 667777777
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHHH
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYS 265 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~ 265 (371)
++.|++.+...+....++.|.+|+++|++++|+......+|..++|+++|.+.+..| |+..+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 336 FFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 888877777778888999999999999999999999999999999999999999988 8776665
No 134
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.57 E-value=4.4e-14 Score=130.56 Aligned_cols=159 Identities=13% Similarity=0.134 Sum_probs=122.4
Q ss_pred HHHHHhhhhhhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHH--HHhhhh
Q 017461 113 FLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT--ALTPVA 189 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~--~~~~~~ 189 (371)
.+.............|.+. +++|.+..+.+++.+...++..++.++.|+++||+|||+.+.++..+..+.. ++..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~ 307 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333344444555566654 7789999999999999999999999999999999999998876555444333 222232
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHH-HHHHHHHHHHHHHhHHHHhcccC-chhHHHHHh
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALV-YSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFG 267 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~ 267 (371)
...+.+.+++..++.|++.+...+...+++.|.+|+++|+++.++. ..+..+|..++|.++|.+.++.| |++.++..+
T Consensus 308 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~ 387 (394)
T TIGR00883 308 DSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLA 387 (394)
T ss_pred cCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHH
Confidence 1116677778889999998888899999999999999999999984 56667899999999999999888 888777665
Q ss_pred HHHH
Q 017461 268 SLGT 271 (371)
Q Consensus 268 ~~~~ 271 (371)
+..+
T Consensus 388 ~~~l 391 (394)
T TIGR00883 388 ALAL 391 (394)
T ss_pred HHHH
Confidence 5433
No 135
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.57 E-value=1.2e-13 Score=130.50 Aligned_cols=162 Identities=12% Similarity=0.050 Sum_probs=114.2
Q ss_pred hhhhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh--CCchhH-HHHHHHHHHHHHHhhhhhccChh
Q 017461 120 RVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALTPVAAKLGLP 195 (371)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~i~~~~~~~~~~~~~~ 195 (371)
.+.....+|.+. +++|.+..+.+++..++.++..++.++.|+++||+ |||... ++...+..++.++..+....+.+
T Consensus 269 ~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 348 (452)
T PRK11273 269 RYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPT 348 (452)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChH
Confidence 344555677754 55789989999999999999999999999999999 555432 22333333333333332211444
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHH-HHHHhHHHHhcccCchhHHHHHhHHHHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSV-TGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 274 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~ 274 (371)
.++++.++.|.+..........++.|.+|++.||++.|+.+....+|.. ++|.+.|.+.+..||+..|++.++++++.+
T Consensus 349 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~ 428 (452)
T PRK11273 349 VDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAV 428 (452)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 5555555566544333334445678999999999999999988888765 479999999999999999998888777766
Q ss_pred HHHhhcc
Q 017461 275 TVWLSKA 281 (371)
Q Consensus 275 ~~~~~~~ 281 (371)
+....+.
T Consensus 429 ~~~~~~~ 435 (452)
T PRK11273 429 ILLIVVM 435 (452)
T ss_pred HHHHHHh
Confidence 6555443
No 136
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.57 E-value=1.8e-13 Score=128.62 Aligned_cols=168 Identities=10% Similarity=-0.017 Sum_probs=116.2
Q ss_pred HHhhhhhhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh--CCchhH-HHHHHHHHHHHHHhhhhhc
Q 017461 116 CNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVL-GFGVVWWSIATALTPVAAK 191 (371)
Q Consensus 116 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~-~~~~~~~~i~~~~~~~~~~ 191 (371)
.......+....|.+. +++|++..+.++..+.+.++..++.++.|+++||+ ++|+.. ....+...+..+.......
T Consensus 255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK11663 255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF 334 (434)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc
Confidence 3333344455566654 67899999999999999999999999999999999 333332 2211111111111111121
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHH
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGT 271 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~ 271 (371)
.+...+.+..++.|++...........+.|.+|+++|++++|+.+....+|..++|.+.|.+.+..||+..|++.+++.+
T Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~ 414 (434)
T PRK11663 335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAG 414 (434)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHH
Confidence 13434444445555543322333455678999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhhcccC
Q 017461 272 VWFTVWLSKAHS 283 (371)
Q Consensus 272 ~~~~~~~~~~~~ 283 (371)
+..+..++..++
T Consensus 415 ~~~~~~~~~~~~ 426 (434)
T PRK11663 415 ISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHhh
Confidence 777766655544
No 137
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.56 E-value=6.5e-14 Score=124.35 Aligned_cols=179 Identities=13% Similarity=0.059 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh--CCchh-HHHHHHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAV-LGFGVVWW 179 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~-~~~~~~~~ 179 (371)
..++.++++.+..+..++.+.-..|. +.|..|.+..+.++..+.+-++...+.+++|+++||+ |||.. -++.+++.
T Consensus 252 k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i 331 (448)
T COG2271 252 KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLI 331 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 35667777788888888888877776 6777899999999999999999999999999999996 66654 44566666
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHH-HHHHHHHhHHHHhcccC
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g 258 (371)
.++.+...++++.|++...++-++.|+..-+..-+......|..|++--|.+.|+.+.+..+ |.+.+....+.+.|.+|
T Consensus 332 ~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g 411 (448)
T COG2271 332 TASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG 411 (448)
T ss_pred HHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC
Confidence 66777777777556789999999999988877777788889999999999999999999998 99999999999999999
Q ss_pred chhHHHHHhHHHHHHHHHHhhccc
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAH 282 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~ 282 (371)
|...|.+..+.++++.++.+....
T Consensus 412 W~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 412 WDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHh
Confidence 999999888877777666555444
No 138
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.56 E-value=2.8e-14 Score=134.66 Aligned_cols=159 Identities=14% Similarity=0.158 Sum_probs=128.7
Q ss_pred HHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh--CCchhHHH--HHHHHHHHHHHhhhhhc
Q 017461 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV--GGKAVLGF--GVVWWSIATALTPVAAK 191 (371)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~~~~--~~~~~~i~~~~~~~~~~ 191 (371)
...........++.+.+++|.+..+.+++.++..++..++.++.|+++||. ++|+...+ +.++.+++.+++.+.+
T Consensus 253 ~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~- 331 (455)
T TIGR00892 253 MFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG- 331 (455)
T ss_pred HHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 333334444556777778899999999999999999999999999999984 34433333 3344445555666677
Q ss_pred cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-CchhHHHHHhHHH
Q 017461 192 LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-GWPSVFYSFGSLG 270 (371)
Q Consensus 192 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-gw~~~f~~~~~~~ 270 (371)
+++.+++.+++.|++.+...+...+++.|.+|++++++.+|++.....+|.++||.++|.+.+.. +|++.|++.+++.
T Consensus 332 -~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~ 410 (455)
T TIGR00892 332 -DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIV 410 (455)
T ss_pred -hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHH
Confidence 88889999999999999998999999999999999999999999999999999999999999877 5999999988876
Q ss_pred HHHHHH
Q 017461 271 TVWFTV 276 (371)
Q Consensus 271 ~~~~~~ 276 (371)
++..+.
T Consensus 411 li~~~~ 416 (455)
T TIGR00892 411 VSAGLF 416 (455)
T ss_pred HHHHHH
Confidence 665443
No 139
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.55 E-value=9.5e-13 Score=125.36 Aligned_cols=167 Identities=13% Similarity=0.036 Sum_probs=127.5
Q ss_pred hhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccC-h-hHH
Q 017461 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG-L-PFL 197 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~-~-~~l 197 (371)
........|.+.+++|.+.....+......++..++.++.|+++||+|||++++.+.++.+++.++++.....+ . ...
T Consensus 287 ~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 287 INVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 33444556888888998888788888888889999999999999999999999999999998887776542111 1 123
Q ss_pred HHHHHHHHhhhhc-hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH------hcccCchhHHHHHhHHH
Q 017461 198 LVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL------IHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 198 ~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l------~~~~gw~~~f~~~~~~~ 270 (371)
+++.++.+++.+. ..+....+++|.+|+++|+.++|+......+|.++++.+.+.+ .+.++|++.|++.++++
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 3334444444443 2367789999999999999999999999999998886665544 45788999999998888
Q ss_pred HHHHHHHhhcccCCCC
Q 017461 271 TVWFTVWLSKAHSSPA 286 (371)
Q Consensus 271 ~~~~~~~~~~~~~~~~ 286 (371)
++.+++.+++.||++.
T Consensus 447 ~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 447 VLAALFMWKFVPETKG 462 (479)
T ss_pred HHHHHHHHhccccCCC
Confidence 8887777777666543
No 140
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=8.5e-13 Score=118.50 Aligned_cols=172 Identities=15% Similarity=0.167 Sum_probs=140.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
......+.....+..+..+-|.+++..|++.+.++++..+|.++..++.++.|++.|| +.|+.+....++.++..+...
T Consensus 216 ~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~ 294 (394)
T COG2814 216 GLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALT 294 (394)
T ss_pred HHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHH
Confidence 3333344444455566777888999999999999999999999999999999999999 999999998888877777766
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
+..+ +.+..++.-++.|++.+.........+++ ..++.+..+.+++...+++|..+|..+||.+.+++|+....++.+
T Consensus 295 ~~~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a 372 (394)
T COG2814 295 FTGA-SPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGA 372 (394)
T ss_pred Hhcc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 6652 56677777777788777666666666666 337899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhccc
Q 017461 268 SLGTVWFTVWLSKAH 282 (371)
Q Consensus 268 ~~~~~~~~~~~~~~~ 282 (371)
++.++.+++.+...+
T Consensus 373 ~l~~~a~~~~~~~~~ 387 (394)
T COG2814 373 ALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHh
Confidence 988887777665444
No 141
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.54 E-value=2.9e-13 Score=128.49 Aligned_cols=240 Identities=13% Similarity=0.048 Sum_probs=158.8
Q ss_pred HHHHHHhhhhhhhhh-hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh----hhCC-chhHHHHHHHHHHHHHH
Q 017461 112 AFLLCNMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGG-KAVLGFGVVWWSIATAL 185 (371)
Q Consensus 112 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~~~~~~~~~~i~~~~ 185 (371)
+.+...+....+... ...+.+.+|++...+|.+..+..+.-++..|+.|.++| |+|| |+.++++.+.++++.++
T Consensus 14 g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~l 93 (473)
T PRK10429 14 GAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFL 93 (473)
T ss_pred chhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHH
Confidence 333334444445544 44467778999999999999999999999999999999 6698 56666788887877666
Q ss_pred hhhhhcc--C--hhHHHHHHHHHHhhhhchhhhHHHHHhccc-CCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-----
Q 017461 186 TPVAAKL--G--LPFLLVVRVFMGIGEGVAMPAMNNILSKWV-PVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----- 255 (371)
Q Consensus 186 ~~~~~~~--~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----- 255 (371)
+...++. + +..+++..++.+++.........+++.|.. ++++|.+..++...+.++|..+++.+...+.+
T Consensus 94 lf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~ 173 (473)
T PRK10429 94 LFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG 173 (473)
T ss_pred HHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6443311 1 345666677778888888888999999998 58899999988777777776666555443322
Q ss_pred --ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHH
Q 017461 256 --RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCH 333 (371)
Q Consensus 256 --~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 333 (371)
..||+...++.+++.++..++.++..+|.+........+ +++......++.+++||.++.+++..++.
T Consensus 174 ~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~~~----------~~~~~~~~~~~~~~~n~~~~~ll~~~~~~ 243 (473)
T PRK10429 174 DRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVSAE----------GSHLTLKDIVALIYKNDQLSCLLGMALAY 243 (473)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccccc----------ccCCCHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 235677777777766666666655556543211100000 00111133455677899998888888888
Q ss_pred HHHHHHHHHhhHHHHHHhcCCChhhhhhh
Q 017461 334 NWGTFILLTWMPTYYNQVSSFGSKTLSET 362 (371)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 362 (371)
....+....+.+.|++...+ +....+.+
T Consensus 244 ~~~~~~~~~~~~y~~~y~~~-~~~~~~~~ 271 (473)
T PRK10429 244 NIASNIINGFAIYYFTYVIG-DADLFPYY 271 (473)
T ss_pred HHHHHHHhhheeeEEEEECC-CHHHHHHH
Confidence 77777777777766655433 34444433
No 142
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.53 E-value=9.1e-13 Score=122.56 Aligned_cols=163 Identities=17% Similarity=0.203 Sum_probs=125.3
Q ss_pred HHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHH-HHHHHHHHHHHHhhhhh---
Q 017461 115 LCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAA--- 190 (371)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~~--- 190 (371)
+............|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+.+.+.+
T Consensus 233 ~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 312 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF 312 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 33334444556678877889999999999999999999999999999999999988764 33333444333332211
Q ss_pred ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHH
Q 017461 191 KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 191 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 270 (371)
..+.+.+++..++.|++.+...+ ....+.|.. +++|+++.|+.+....+|..++|.+++.+.+..||..+|++.+++.
T Consensus 313 ~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~ 390 (402)
T TIGR00897 313 GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALY 390 (402)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 11567777888899988877544 455667765 5689999999999999999999999999999999999999998887
Q ss_pred HHHHHHHhh
Q 017461 271 TVWFTVWLS 279 (371)
Q Consensus 271 ~~~~~~~~~ 279 (371)
++..++.++
T Consensus 391 ~i~~~~~~~ 399 (402)
T TIGR00897 391 VVSAFLTAF 399 (402)
T ss_pred HHHHHHHHH
Confidence 776665544
No 143
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.53 E-value=9.4e-13 Score=119.40 Aligned_cols=228 Identities=10% Similarity=0.039 Sum_probs=140.6
Q ss_pred HHHHHhhhhhhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHH--HHHHHHH-HHhhh
Q 017461 113 FLLCNMDRVNMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV--VWWSIAT-ALTPV 188 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~--~~~~i~~-~~~~~ 188 (371)
.+...+...+..+..+... ++.|++.+++|.+.++..+...+.+|+.|.++||+|.||-++... ++...+. +...+
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~ 95 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVF 95 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444555666767655 458999999999999999999999999999999999776554333 2222222 33233
Q ss_pred hhc--cChh-HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 189 AAK--LGLP-FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 189 ~~~--~~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
.+- .|.+ ..+++.+..|+......++.-+++.++. ++.+.-.|-.-..+.+|.+++..++|.+.+ .+-...||+
T Consensus 96 ~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi 172 (412)
T PF01306_consen 96 GPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWI 172 (412)
T ss_dssp HHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHH
Confidence 220 1332 3333344445555555566666665554 455666777888999999999999999987 345677887
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
..+.+++..++.+...++.+.+....+..+. ++++.......+++|+|++|.+.+........+..+-..++
T Consensus 173 ~s~~~~il~lll~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~ 244 (412)
T PF01306_consen 173 ASAAAIILLLLLLLLKPDVPPQAEVADALGA--------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFP 244 (412)
T ss_dssp HHHHHHHHHHHHHSS---SSSSS-SSTTSSS--------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcCchhhhhhccccc--------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666666655555555443332211111000 01111233456789999999988888887788888877788
Q ss_pred HHHHHh
Q 017461 346 TYYNQV 351 (371)
Q Consensus 346 ~~l~~~ 351 (371)
.|+...
T Consensus 245 ~y~~~~ 250 (412)
T PF01306_consen 245 IYFASF 250 (412)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 888763
No 144
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.52 E-value=1.1e-12 Score=121.17 Aligned_cols=147 Identities=16% Similarity=0.084 Sum_probs=125.0
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
.....|.+.++.|.+..+.|++.+...++..+..++.|++.||+|+|+.+.++.++.+++.++.++.+ +.+.+++..+
T Consensus 224 ~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 301 (382)
T PRK11128 224 YYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--ALPWLIVIQI 301 (382)
T ss_pred HHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHH
Confidence 33444555577999999999999999999999999999999999999999999999999888888888 8999999999
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
+.|++.+...+....++.+. ++++++++.+++. ....+|..+||.++|.+.+.+|+ ..|+..+++.++.
T Consensus 302 l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~ 371 (382)
T PRK11128 302 LHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPA 371 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHH
Confidence 99999998888888888887 5667788898876 55678889999999999999887 4677666665544
No 145
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.52 E-value=1.7e-13 Score=128.49 Aligned_cols=219 Identities=18% Similarity=0.222 Sum_probs=170.0
Q ss_pred hhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh----hhCCchh-HHHHHHHHHHHHHHhhhh-h-cc----C
Q 017461 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD----TVGGKAV-LGFGVVWWSIATALTPVA-A-KL----G 193 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~-~~~~~~~~~i~~~~~~~~-~-~~----~ 193 (371)
...+.+.+.+|+++..+|++..+..+..++..|+.|.++| |+|||+. +++|.++.+++.+++... + +. .
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~ 102 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAK 102 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhH
Confidence 4455677888999999999999999999999999999999 8996655 557888888888777766 3 11 2
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-------CchhHHHH
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYS 265 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~ 265 (371)
..++++..++..++.........++..|..+ +++|.+..+.-..+..+|..+...+.+.+.+.. +|++..++
T Consensus 103 ~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v 182 (428)
T PF13347_consen 103 LVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALV 182 (428)
T ss_pred HHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHH
Confidence 3446777788899999999999999999997 578999999988888888876666666555321 69999999
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
.+++.++..++..+..+|.+.+..+. +++......++.+++||.++.+.+..++...+........+
T Consensus 183 ~~iv~~v~~~i~~~~~ke~~~~~~~~-------------~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~ 249 (428)
T PF13347_consen 183 LAIVGLVFFLITFFFVKERSVEVTEQ-------------EKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLP 249 (428)
T ss_pred HHHHHHHHhhhhhheeeecccccccc-------------ccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHH
Confidence 99998888888888888721111110 11112244677899999999999999999888888888888
Q ss_pred HHHHHhcCCCh
Q 017461 346 TYYNQVSSFGS 356 (371)
Q Consensus 346 ~~l~~~~g~s~ 356 (371)
.|.+...|.+.
T Consensus 250 y~~~~vl~~~~ 260 (428)
T PF13347_consen 250 YYFTYVLGNEG 260 (428)
T ss_pred HHHHHHhcCch
Confidence 88888777763
No 146
>PRK09952 shikimate transporter; Provisional
Probab=99.51 E-value=1.7e-12 Score=122.11 Aligned_cols=157 Identities=13% Similarity=0.018 Sum_probs=116.0
Q ss_pred hhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh--hccChhHHHH
Q 017461 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFLLV 199 (371)
Q Consensus 123 ~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~ 199 (371)
.....|. +.+++|.+......+.....+...++.++.|+++||+|||+++..+.++.+++.+.+... ...+.+.+++
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 3444444 567788888776666667777788899999999999999999988877666554433221 1113445555
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhccc--CchhHHHHHhHHHHHHHHH
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRF--GWPSVFYSFGSLGTVWFTV 276 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~--gw~~~f~~~~~~~~~~~~~ 276 (371)
..++.|++.+...+...++++|.+|.+.|+.+.++.. .+..+|+.++|.+.+.+.+.. +|...+...+++.++..+.
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~ 428 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT 428 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH
Confidence 6677788888888888999999999999999988854 445589999999999998743 4888888777776666555
Q ss_pred Hhh
Q 017461 277 WLS 279 (371)
Q Consensus 277 ~~~ 279 (371)
.+.
T Consensus 429 ~~~ 431 (438)
T PRK09952 429 ALL 431 (438)
T ss_pred HHH
Confidence 543
No 147
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.51 E-value=1.1e-12 Score=122.99 Aligned_cols=141 Identities=14% Similarity=0.127 Sum_probs=108.2
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
+...+|.+.++.|.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.++.+++.+........+.. .+.-+
T Consensus 250 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 327 (426)
T PRK12307 250 IFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYL--LLGAC 327 (426)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHH--HHHHH
Confidence 4455677767789899999999999999999999999999999999999998888777766555443311222 22223
Q ss_pred HHHh--hhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 203 FMGI--GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 203 l~G~--~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
+.|+ +..+..+..+.++.|.+|+++||+++|+......+|..++|.+.+.+.+..|+....++
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~ 392 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTF 392 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 3333 22333456677889999999999999999999999999999999999998887654333
No 148
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.49 E-value=1.4e-12 Score=121.12 Aligned_cols=142 Identities=8% Similarity=0.064 Sum_probs=122.5
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhh
Q 017461 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (371)
Q Consensus 135 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 214 (371)
+.+....|++.++..+...++.++.|++.||+|+|+.+.++.++.+++.++...++ +.+.+++.+++.|++.+.....
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--~~~~~~~~~~l~g~~~~~~~~~ 327 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--TALEVVILKMLHAFEVPFLLVG 327 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--ChHHHHHHHHHHHHHHHHHHHH
Confidence 45566789999999999999999999999999999999999999998888877887 8888899999999998777667
Q ss_pred HHHHHhcccCCcchHHHHHH-HHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 215 MNNILSKWVPVAERSRSLAL-VYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~-~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
...++.+..+++.++...+. ++....+|..+++.++|++.+..||+.+|.+.+++.++..+...
T Consensus 328 ~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 328 CFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888877666 67889999999999999999999999999998888776655443
No 149
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.48 E-value=2.8e-12 Score=121.70 Aligned_cols=155 Identities=15% Similarity=0.164 Sum_probs=138.9
Q ss_pred hhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHH
Q 017461 122 NMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (371)
Q Consensus 122 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 200 (371)
.+..++|.+. +.+|.+...+|++.+.+.+|..+++++.+++.+|+++++.+..+.++++++.+..++++ +.+..++.
T Consensus 236 a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--~~~~~~~~ 313 (524)
T PF05977_consen 236 AVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--SFWLALIA 313 (524)
T ss_pred HHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--HHHHHHHH
Confidence 3445577765 56899999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
.++.|++.....+...+.+.+..|++.||++++++.+....+..+|.++.|.+.+.+|.+..+.+.++..++..++.+
T Consensus 314 l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 314 LFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888899999999999999999999999999999999999999999999999998887765555544443
No 150
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.48 E-value=4.6e-12 Score=118.93 Aligned_cols=173 Identities=14% Similarity=0.099 Sum_probs=141.6
Q ss_pred HHHHHHHHHHHH-hhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCc--hhHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCN-MDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIA 182 (371)
Q Consensus 106 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~ 182 (371)
+...++++++.. ....++........+++|++..+...+..+..+..+++++++|++.||+|.| ++++++++++.+.
T Consensus 283 ~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i 362 (477)
T PF11700_consen 283 LFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIII 362 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHH
Confidence 333344444332 2234444545556779999999999999999999999999999999999999 8888888887665
Q ss_pred HHHhhh--------hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 183 TALTPV--------AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 183 ~~~~~~--------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
.+...+ .+ +.|.+.+.-++.|+..|..++...++.++..|+++.+..+|++....-....+||++.|.+.
T Consensus 363 ~~~g~~G~~~~~~g~~--~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~ 440 (477)
T PF11700_consen 363 PLYGLFGFWPSFFGLK--SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLIT 440 (477)
T ss_pred HHHHHHHhhhcccCcc--cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544 45 78899999999999999999999999999999999999999999999999999999999999
Q ss_pred cccC-chhHHHHHhHHHHHHHHHHhhc
Q 017461 255 HRFG-WPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 255 ~~~g-w~~~f~~~~~~~~~~~~~~~~~ 280 (371)
+..| -|+.++...++.++.+++.++.
T Consensus 441 ~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 441 DATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 9776 7888888777777666665443
No 151
>PRK09848 glucuronide transporter; Provisional
Probab=99.47 E-value=4e-12 Score=120.00 Aligned_cols=235 Identities=12% Similarity=0.048 Sum_probs=145.9
Q ss_pred HHHHHHhhhhhhhh-hhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh----CCchhH-HHHHHHHHHHHHH
Q 017461 112 AFLLCNMDRVNMSI-AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV----GGKAVL-GFGVVWWSIATAL 185 (371)
Q Consensus 112 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~ 185 (371)
+.+..........+ +..++.+.+|++..++|.+.++..+..++..++.|+++||. |||+.. .++.+...+..++
T Consensus 16 g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~ 95 (448)
T PRK09848 16 GDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVL 95 (448)
T ss_pred chHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHH
Confidence 33333333333333 34567778899999999999999999999999999999996 767654 5555555544444
Q ss_pred h-hhh----hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHH-----HHHHHHHHHhHHHHh
Q 017461 186 T-PVA----AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGM-----YLGSVTGLAFSPFLI 254 (371)
Q Consensus 186 ~-~~~----~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~-----~~g~~~g~~~~~~l~ 254 (371)
. ... .....+.+++..++.+++.+...+...++..+... +++|.+..++-..+. .++..++|.+++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g 175 (448)
T PRK09848 96 VFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP 175 (448)
T ss_pred HHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3 221 10123345555677888888888777777777664 467888766654433 345555666555432
Q ss_pred ccc--CchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHH
Q 017461 255 HRF--GWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFC 332 (371)
Q Consensus 255 ~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 332 (371)
... +|.....+.++++++..++.....+|+...+.+ ++.....++.++|||.++...+..++
T Consensus 176 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~~~~----------------~~~~~~~~~~l~~n~~f~~~~~~~~~ 239 (448)
T PRK09848 176 EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVA----------------QPSLKISLQTLKRNRPLFMLCIGALC 239 (448)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCCCcc----------------CCCHHHHHHHHhCCchHHHHHHHHHH
Confidence 111 122122233333333333333334443221111 01112346779999999999988888
Q ss_pred HHHHHHHHHHhhHHHHHHhcCCChhhhhhh
Q 017461 333 HNWGTFILLTWMPTYYNQVSSFGSKTLSET 362 (371)
Q Consensus 333 ~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~ 362 (371)
...++.......|.|+++.+|.++...++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 269 (448)
T PRK09848 240 VLISTFAVSASSLFYVRYVLNDTGLFTVLV 269 (448)
T ss_pred HHHHHHHHhhhheeeEeeecCChHHHHHHH
Confidence 888888888888888888888877655543
No 152
>PRK15075 citrate-proton symporter; Provisional
Probab=99.46 E-value=6e-12 Score=118.28 Aligned_cols=145 Identities=19% Similarity=0.150 Sum_probs=105.9
Q ss_pred Hhhhhhhhhhhhhhhh-hcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH-Hh-hhhhccC
Q 017461 117 NMDRVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA-LT-PVAAKLG 193 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~-~~-~~~~~~~ 193 (371)
......+....|.+.+ .+|.+..+.++....+.++..++.+++|+++||+|||+++.++.++.++..+ .. ......+
T Consensus 251 ~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (434)
T PRK15075 251 TVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPS 330 (434)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 3334445566777554 5899999999999999999999999999999999999998876555433222 11 1112114
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHH-HHHHHHHHHHHhHHHHhcccCchh
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGWPS 261 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw~~ 261 (371)
+..+.+..++.|++.+...+....++.|.+|++.|+.+.++... +..++..++|.+.+.+.+..|+++
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~~ 399 (434)
T PRK15075 331 FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDKA 399 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCch
Confidence 44455556667777777667777889999999999999998644 444567889999999999888653
No 153
>TIGR00895 2A0115 benzoate transport.
Probab=99.46 E-value=3.1e-12 Score=118.49 Aligned_cols=138 Identities=14% Similarity=0.161 Sum_probs=112.5
Q ss_pred HHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccC
Q 017461 114 LLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLG 193 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 193 (371)
++............|.+.+++|.+..+.+++.+...++..++.++.|++.||+|+|+.+....+......++..... +
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 337 (398)
T TIGR00895 260 FMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLF--S 337 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhh--C
Confidence 33334444455667788889999999999999999999999999999999999999544444433333333333355 7
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
.+.+++..++.|++.+...+...+++.|.+|+++|++++|+......+|..+||.++|.+
T Consensus 338 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 338 PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 778888899999999999999999999999999999999999999999999999999875
No 154
>PRK10054 putative transporter; Provisional
Probab=99.45 E-value=2.5e-12 Score=119.26 Aligned_cols=154 Identities=12% Similarity=0.087 Sum_probs=127.8
Q ss_pred hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh-hccChhHHHHHHHHHHhhhhc
Q 017461 132 AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 132 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~ 210 (371)
++.+.+....+++...+.+.....+++.|++.||+++|+.+.+++++.+++.+...++ + +.+.+++..++.|+|.+.
T Consensus 237 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~ 314 (395)
T PRK10054 237 ADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN--SLLLWGMSAAVFTVGEII 314 (395)
T ss_pred cccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch--HHHHHHHHHHHHHHHHHH
Confidence 4556677778888888888888888999999999999999999998888888777664 4 677778889999999988
Q ss_pred hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
..+....++.+..|++.|+.+.+..+ ...+|..+||.++|.+.++.|....|++.++...+..++.+...+|+|..+
T Consensus 315 ~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (395)
T PRK10054 315 YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLMLKGMRARPWGQ 391 (395)
T ss_pred HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCcccC
Confidence 88888899999999999999988765 566899999999999999999988998887777666666665555555543
No 155
>PRK10504 putative transporter; Provisional
Probab=99.45 E-value=4.4e-12 Score=120.51 Aligned_cols=140 Identities=17% Similarity=0.137 Sum_probs=116.3
Q ss_pred hhhhhhhhhhhhh-hcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc-cChhHH
Q 017461 120 RVNMSIAILPMSA-EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFL 197 (371)
Q Consensus 120 ~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-~~~~~l 197 (371)
........|.+.+ .+|.++.+.+++.....++..++.++.|++.||+|+|+++.++.++.+++.++..+... .+.+.+
T Consensus 277 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (471)
T PRK10504 277 SGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLL 356 (471)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHH
Confidence 3445556676555 58989999999999999999999999999999999999999999888888776665421 144445
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.+..++.|++.+...+....++.+..|++.++.+.++.+....+|..+|+.+++.+.+..|+
T Consensus 357 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 357 PFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 56678889998888888899999999999999999999999999999999999998876655
No 156
>PRK11462 putative transporter; Provisional
Probab=99.45 E-value=3.2e-11 Score=113.88 Aligned_cols=222 Identities=10% Similarity=0.016 Sum_probs=154.5
Q ss_pred Hhhhhhhhhh-hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCchh-HHHHHHHHHHHHHHhhhhh
Q 017461 117 NMDRVNMSIA-ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~i~~~~~~~~~ 190 (371)
++....++.. ...+.+..|+++..+|.+..+.-+.-++.-|+.|.++|| +|||+. ++++.+.++++.+++...+
T Consensus 22 ~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p 101 (460)
T PRK11462 22 HIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP 101 (460)
T ss_pred hHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC
Confidence 3333444433 444677889999999999999999999999999999996 787655 5567777887777665555
Q ss_pred ccC----hhHHHHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc-------cC
Q 017461 191 KLG----LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------FG 258 (371)
Q Consensus 191 ~~~----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------~g 258 (371)
+.+ ...+++..++..++..+....-.++.+|..+ +++|.+..++...+..+|..+++.+...+... .|
T Consensus 102 ~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g 181 (460)
T PRK11462 102 DLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLG 181 (460)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhh
Confidence 211 4456667777888888888888999999987 78999999999999999888887776554443 25
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHH
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTF 338 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 338 (371)
|+....+.+++.+++.++.+...+|.+..+.++. .....++.+++||.++.+....++......
T Consensus 182 ~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~~~~----------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~ 245 (460)
T PRK11462 182 FQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTT----------------SMREDLRDIWQNDQWRIVGLLTIFNILAVC 245 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeccCCCccCC----------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence 7777777777766666555555555432211100 012345678889988877766666666655
Q ss_pred HHHHhhHHHHHHhcCC
Q 017461 339 ILLTWMPTYYNQVSSF 354 (371)
Q Consensus 339 ~~~~~~~~~l~~~~g~ 354 (371)
........|.....|.
T Consensus 246 ~~~~~~~y~~~y~~g~ 261 (460)
T PRK11462 246 VRGGAMMYYVTWILGT 261 (460)
T ss_pred HHHhHhhhhhhhhcCC
Confidence 5555555555544443
No 157
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.44 E-value=4.7e-12 Score=121.22 Aligned_cols=167 Identities=10% Similarity=-0.005 Sum_probs=112.6
Q ss_pred hhhhhhhhhhhhhhhcCCCcchHHH------------HHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 119 DRVNMSIAILPMSAEFNWNPATVGL------------IQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
..+......|.+.++.|.+....+. ...+..++..++.++.++++||+|||++++++.++.+++.++.
T Consensus 303 ~~y~~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l 382 (502)
T TIGR00887 303 AFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVL 382 (502)
T ss_pred HHHccccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHH
Confidence 3334445577777788876543211 2233445666788999999999999999998888877777665
Q ss_pred hhhhcc--ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc--------
Q 017461 187 PVAAKL--GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-------- 256 (371)
Q Consensus 187 ~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-------- 256 (371)
++.... +...+...-++..++..+..+....+.+|.+|.+.|+++.|+......+|.+++|.+.+.+.+.
T Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 462 (502)
T TIGR00887 383 GFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYP 462 (502)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccc
Confidence 543210 1111221112222222233456677889999999999999999999999999999999998873
Q ss_pred --cCchhHHHHHhHHHHHHHHHHhhcccCCCC
Q 017461 257 --FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 257 --~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
.++...|++.++++++..+.. ++.||++.
T Consensus 463 ~~~~~~~~~~i~~~~~~~~~i~~-~~lpEt~~ 493 (502)
T TIGR00887 463 TGIWMGHVLEIFALFMFLGILFT-LLIPETKG 493 (502)
T ss_pred ccccchHHHHHHHHHHHHHHHHh-eEeccCCC
Confidence 345667888887777665544 56676544
No 158
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.44 E-value=1.9e-11 Score=116.42 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=120.8
Q ss_pred hhhhhhhcCCCcchHHHHHH-HHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh---hhhhccChhHHHHHHH
Q 017461 127 ILPMSAEFNWNPATVGLIQS-SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r~ 202 (371)
.|.+.+++|.+..+.+++.. ...++.+++.+++|+++||+|+|+.+.++.++.+++.+++ +... .+.+.+.+.-+
T Consensus 246 ~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~~~~~l~~~~~ 324 (491)
T PRK11010 246 TTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-KNLYSMGAAVF 324 (491)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHH
Confidence 44456779999999999974 6668999999999999999999988877666555544332 2221 15555555666
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhc
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 280 (371)
+..++.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++..++.++.
T Consensus 325 l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 325 FENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 766666666677788888999999999999999999999999999999999999999999999888888776666554
No 159
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.43 E-value=2.7e-12 Score=120.83 Aligned_cols=164 Identities=12% Similarity=0.026 Sum_probs=113.8
Q ss_pred hhhhhhhhhh-hhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH---HHHHHhhhhhccChhHH
Q 017461 122 NMSIAILPMS-AEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS---IATALTPVAAKLGLPFL 197 (371)
Q Consensus 122 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~~~~~~~~~~l 197 (371)
......|.+. +.+|.+..+.++....+.++..++.++.|+++||+|+++....+..+.. ++.+++...+..+.+..
T Consensus 269 ~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T TIGR00712 269 GVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVD 348 (438)
T ss_pred HHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHH
Confidence 3444566654 4579999999999999999999999999999999975443233332222 22222222211134444
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHH-HHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g-~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 276 (371)
.+..++.|++...........+.|.+|+++|+.+.|+.+....+| .+++|.+.|.+.+..||...|++.+++.++..+.
T Consensus 349 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~ 428 (438)
T TIGR00712 349 MICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVIL 428 (438)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 444555565433322333456789999999999999998887776 5789999999999999999999888887777777
Q ss_pred HhhcccCCC
Q 017461 277 WLSKAHSSP 285 (371)
Q Consensus 277 ~~~~~~~~~ 285 (371)
.++..+|.+
T Consensus 429 ~~~~~~~~~ 437 (438)
T TIGR00712 429 LIVVMIGEK 437 (438)
T ss_pred HHHHHhhcc
Confidence 777666543
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.43 E-value=1.4e-11 Score=110.05 Aligned_cols=157 Identities=9% Similarity=0.072 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhh---hcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSA---EFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
+..+..++.......+....+.+.+ .+|+++.+.++..+.+..+..++.++.+++.||+|+|+++.++.++.+++.+
T Consensus 144 l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~ 223 (310)
T TIGR01272 144 LGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI 223 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3444444444344445555555443 3689999999999999999999999999999999999999999888888877
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
+....+ +.+. ..+-++.|++.+..+|...+...+.+|+ +.+.+.++. ....+|.+++|++.|.+.|..|.+..|+
T Consensus 224 l~~~~~--~~~~-~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~ 298 (310)
T TIGR01272 224 GAALTH--GYVA-MWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFA 298 (310)
T ss_pred HHHHcC--CHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHH
Confidence 666655 4333 3456688999999999999999998854 456677775 5677899999999999999999988887
Q ss_pred HHhHH
Q 017461 265 SFGSL 269 (371)
Q Consensus 265 ~~~~~ 269 (371)
+..+.
T Consensus 299 v~~~~ 303 (310)
T TIGR01272 299 LPVPC 303 (310)
T ss_pred HHHHH
Confidence 54433
No 161
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.43 E-value=2.2e-12 Score=117.37 Aligned_cols=174 Identities=21% Similarity=0.317 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHhhhhhhh-hhhhhhhhhcC----CCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMS-IAILPMSAEFN----WNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWW 179 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~ 179 (371)
+..++..-+..-+.++.+. .+.-++..+++ +++++..-+.++|..-.-+...++|+++||+ |+|+++++|.+++
T Consensus 23 l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~ 102 (498)
T COG3104 23 LYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILM 102 (498)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Confidence 3344455555555554444 33445566665 9999998888888888888999999999996 9999999999999
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCc--chHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA--ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
++|.++.+.+...+...++++-++.++|.|.+-+...++++|.+|++ +|-..++++.++.++|..++|++.+++.+++
T Consensus 103 ~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~ 182 (498)
T COG3104 103 AIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY 182 (498)
T ss_pred HHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh
Confidence 99999998883116788999999999999999999999999999854 4667788899999999999999999999999
Q ss_pred CchhHHHHHhHHHHHHHHHHhh
Q 017461 258 GWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 258 gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
||...|.+.++-..+.++..+.
T Consensus 183 g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 183 GWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877765555554443
No 162
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.8e-11 Score=113.33 Aligned_cols=188 Identities=13% Similarity=0.069 Sum_probs=142.6
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
..|+-....+.+......-+...+......+-++.|++..+..+......+...++.+++..+.||+|||+.++++..++
T Consensus 266 ~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~ 345 (485)
T KOG0569|consen 266 TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLM 345 (485)
T ss_pred chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Confidence 34444444444444444444555666667788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhcc-C-h--h---HHHHHHHHHHhhhhc-hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHH
Q 017461 180 SIATALTPVAAKL-G-L--P---FLLVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (371)
Q Consensus 180 ~i~~~~~~~~~~~-~-~--~---~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (371)
.+..+++...... + . | ..+++.++..++.+. ..|..+-+.+|.+|++.|..++++......+...+-...-.
T Consensus 346 ~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp 425 (485)
T KOG0569|consen 346 AVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFP 425 (485)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888776654311 1 1 1 122333333333332 35888899999999999999999998888888877777777
Q ss_pred HHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 252 FLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 252 ~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
.+.+..|= +.|++..+.+++.++..++..||++.+.
T Consensus 426 ~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~ 461 (485)
T KOG0569|consen 426 PLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRT 461 (485)
T ss_pred HHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCC
Confidence 77777666 7899999999999999999999986644
No 163
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.43 E-value=4.9e-12 Score=115.69 Aligned_cols=133 Identities=17% Similarity=0.236 Sum_probs=119.4
Q ss_pred hhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHH
Q 017461 125 IAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (371)
Q Consensus 125 ~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 203 (371)
...|.+.++ +|.+..+.+++.+...++..++.++.+++.||+|||+.+..+.++.+++.++..+.+. +.+.+++..++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 310 (365)
T TIGR00900 232 ALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFA 310 (365)
T ss_pred HHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHH
Confidence 556776654 8999999999999999999999999999999999999999988888888888777762 38888899999
Q ss_pred HHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.|++.+...+...+++.|.+|+++|+++.|+......+|..+++.++|.+.+..|
T Consensus 311 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 311 IGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999988654
No 164
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.42 E-value=2.9e-11 Score=112.12 Aligned_cols=148 Identities=12% Similarity=0.049 Sum_probs=118.4
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHh
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~ 206 (371)
.|.+.+++|++..+.+++...+.++..++.++.|++.||.+++..+....+..+...++....+ +.+.+.+..++.|+
T Consensus 240 ~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~l~G~ 317 (394)
T PRK10213 240 RPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGS--DKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHH
Confidence 4667788999999999999999999999999999999996544334433333444445545556 77888888999999
Q ss_pred hhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 207 GEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 207 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
+.+...+...+++.+..| +++++..++......+|..+|+.++|.+.+..|++..++..+++.++..+..
T Consensus 318 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 387 (394)
T PRK10213 318 TFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLV 387 (394)
T ss_pred HHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHHHHHH
Confidence 999888888888888886 5677888888888999999999999999999999998888776665554443
No 165
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.41 E-value=3.4e-12 Score=117.33 Aligned_cols=143 Identities=13% Similarity=0.078 Sum_probs=105.6
Q ss_pred hhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC-chhHH-HHH-HHHHHHHHHhhhhhccChhH
Q 017461 121 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLG-FGV-VWWSIATALTPVAAKLGLPF 196 (371)
Q Consensus 121 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~-~~~-~~~~i~~~~~~~~~~~~~~~ 196 (371)
.......|. +.+++|.+..+.+++.+.+.++..++.++.|++.||+++ |+... ... .+..++..........+.+.
T Consensus 233 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (379)
T TIGR00881 233 TGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLM 312 (379)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHH
Confidence 334444555 456789999999999999999999999999999998643 33222 221 22222222222211114556
Q ss_pred HHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHH
Q 017461 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF 263 (371)
Q Consensus 197 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f 263 (371)
+++..++.|+......+....++.|.+|+++|+++.|+......+|..++|.+.|.+.+..||++.|
T Consensus 313 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 313 DLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 6677777887666666667788999999999999999999999999999999999999999998754
No 166
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.40 E-value=7.9e-11 Score=100.24 Aligned_cols=180 Identities=14% Similarity=0.081 Sum_probs=135.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI 181 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i 181 (371)
||..+......... ....+.++...|.+++.+|++.++...+.++..+|..+ +++.|.+.|++|.+.++.+|.+...+
T Consensus 1 rW~~l~a~~~v~~~-~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~ 78 (250)
T PF06813_consen 1 RWLSLVASIWVQLC-SGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFV 78 (250)
T ss_pred ChhhHHHHHHHHHh-cCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 46655544444433 34567788999999999999999999999999999876 58999999999999999999999999
Q ss_pred HHHHhhhhhc-----cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Q 017461 182 ATALTPVAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 182 ~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (371)
|..+..++-. .++|.+.+..++.|.+.+....++.....+.|| ++||.+.|+.-...++++.+-..+...+.+.
T Consensus 79 GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 79 GYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 9988776532 257888888888888887777777777778896 6899999999999999888877766666554
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
-.-.. +.+.+....+..++..++.+..+
T Consensus 158 ~~~~f-ll~la~~~~~v~l~~~~~vr~~~ 185 (250)
T PF06813_consen 158 DPSSF-LLFLAVLPAVVCLVAMFFVRPVP 185 (250)
T ss_pred ChHHH-HHHHHHHHHHHHHHHhhheeccC
Confidence 22333 33444444444444444444433
No 167
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.40 E-value=2.3e-11 Score=112.71 Aligned_cols=151 Identities=17% Similarity=0.132 Sum_probs=115.2
Q ss_pred hhhhhhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh----ccChhHHHHH
Q 017461 126 AILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA----KLGLPFLLVV 200 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~~ 200 (371)
..+.+.+|.|++.+++|++.....+ ...++.++.|++.||+|+|+.+.++.++.++..+...... ..+.+.++..
T Consensus 230 ~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (390)
T TIGR02718 230 LSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSC 309 (390)
T ss_pred HhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHH
Confidence 4455556789999999999888764 6667789999999999999999887776644333222111 0033444555
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCC-cchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHH
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 276 (371)
..+.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..++
T Consensus 310 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 310 SAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 5666777777777777887777766 789999999999999999999999999999999999999887766665443
No 168
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.40 E-value=2.8e-11 Score=111.80 Aligned_cols=152 Identities=11% Similarity=-0.014 Sum_probs=114.3
Q ss_pred hhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh-hhccChhHHHHHHHHH
Q 017461 126 AILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AAKLGLPFLLVVRVFM 204 (371)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~~r~l~ 204 (371)
..|.+.+.+|.++.+.+++.+...++..++.++.|++.||+|+|+.+..+..+.+++.++... .+ +.+..++..++.
T Consensus 222 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~ 299 (382)
T PRK10091 222 IKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG--MKTASLIFAFIC 299 (382)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHH
Confidence 345566778999999999999999999999999999999999999999998888888766544 44 556666677777
Q ss_pred HhhhhchhhhHH-HHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc-cCchhHHHHHhHHHHHHHHHHhhcc
Q 017461 205 GIGEGVAMPAMN-NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR-FGWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 205 G~~~~~~~~~~~-~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
+++.....+... ....+..+++.++.. .......+|.++||.++|.+.+. .+|++.+++.++++++.......+.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 300 CAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred HHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHh
Confidence 776655444433 344454445555544 34667889999999999999985 6899999988777665555444443
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.39 E-value=1.3e-11 Score=116.09 Aligned_cols=135 Identities=13% Similarity=0.143 Sum_probs=111.3
Q ss_pred hhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 124 SIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 124 ~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
....+.+.++ ++ +....+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+.++ +.+.+++..+
T Consensus 242 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 319 (437)
T TIGR00792 242 NGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGS-NLPLILVLII 319 (437)
T ss_pred cchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcch-hHHHHHHHHH
Confidence 3334444333 44 5667788888889999999999999999999999999999988888877766531 5677788889
Q ss_pred HHHhhhhchhhhHHHHHhcccC-------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 203 FMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
+.|++.+...+...++++|..+ ++++|.+.|+.+....+|..+++.+.|.+.+..||.
T Consensus 320 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 320 LAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999988999999998865 456799999999999999999999999998877763
No 170
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.38 E-value=3.4e-11 Score=109.38 Aligned_cols=151 Identities=10% Similarity=0.069 Sum_probs=131.8
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhh
Q 017461 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (371)
Q Consensus 135 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 214 (371)
+.++..+|.+.++..+.-++.-.+..++.+|+|.|+.++++..++++=.+++++++ +.+.+.+.+.++|+-.+.....
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--~~~~i~~~klLH~~e~~l~lva 332 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--NPWVISLIKLLHALEFPLLLVA 332 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----SHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--chHHHHHHHHHHHHHHHHHHHH
Confidence 34566799999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHhcccCCcchHHHHHHH-HHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCC
Q 017461 215 MNNILSKWVPVAERSRSLALV-YSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAE 287 (371)
Q Consensus 215 ~~~~i~~~~~~~~r~~~~~~~-~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 287 (371)
...++++.+|++-.++...+. +.+.++|.++.+.++|.+.|+.|.+.+|++.+.+.+...++..+.++++++.
T Consensus 333 ~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 333 AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999999988888888774 7889999999999999999999999999999998888777777776655443
No 171
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.38 E-value=5.7e-11 Score=110.72 Aligned_cols=159 Identities=11% Similarity=0.008 Sum_probs=122.5
Q ss_pred hhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh---ccChhHHHH
Q 017461 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA---KLGLPFLLV 199 (371)
Q Consensus 124 ~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~---~~~~~~l~~ 199 (371)
....|. +.+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++.+++.++..+.. ..+++.+++
T Consensus 235 ~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 235 IALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred HHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 333455 4567899999999988888889999999999999999999999999888877777666532 125677788
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
+.++.|+|.+...+.......... +++||++.++++....+|..+|+.+++.+.+..++....+..++.+++..++...
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTLFSS-DVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRI 393 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHhhhc-cccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 889999998887776666554443 5899999999999999999999999999988888776555555555554444444
Q ss_pred cccC
Q 017461 280 KAHS 283 (371)
Q Consensus 280 ~~~~ 283 (371)
+.++
T Consensus 394 ~~~~ 397 (406)
T PRK15402 394 FLKD 397 (406)
T ss_pred Hhcc
Confidence 4333
No 172
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.38 E-value=1.4e-11 Score=110.12 Aligned_cols=160 Identities=12% Similarity=0.022 Sum_probs=121.5
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------------
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR---------------- 256 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~---------------- 256 (371)
+++.++++-++.|.|.+...+..++++++..+++++++.+++.+.++++|..++|.+++.+...
T Consensus 9 ~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 9 YYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 7999999999999999999999999999999999999999999999999999999999987732
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhc-ccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHH
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSK-AHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (371)
..|+++|++.+++.++..+++.+. .||.+.++. ++.. .++ ....+.++++|.++...+..+++..
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~---~~~~--------~~~---~~~~~~~~~~~~~~l~~~~~f~yvg 154 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQEADV---ARVS--------SGD---TTQKTSAFQFTHLVLGALGIFVYVG 154 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccc---cccc--------ccc---ccchhhHHhhHHHHHHHHHHHHHHH
Confidence 369999997777655555444332 232211110 0000 000 0112246778888888888888888
Q ss_pred HHHHHHHhhHHHHHHh--cCCChhhhhhhhhhe
Q 017461 336 GTFILLTWMPTYYNQV--SSFGSKTLSETVQVC 366 (371)
Q Consensus 336 ~~~~~~~~~~~~l~~~--~g~s~~~~~~~~~~~ 366 (371)
...+...|++.|+.+. +|+++.+++...+..
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~ 187 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYT 187 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Confidence 8999999999999864 699999888876554
No 173
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.38 E-value=2.7e-10 Score=107.06 Aligned_cols=221 Identities=15% Similarity=0.048 Sum_probs=164.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHH-HHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI 218 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 218 (371)
..++..++..+..++..|+.|.++|+-|+||.++ +..++..++++++.+.+..+++...+..++.-++.+.......++
T Consensus 71 ~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~ 150 (477)
T PF11700_consen 71 LWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAY 150 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999999999999999776655 455555666777777543356666666777778888888999999
Q ss_pred HhcccCCcch--------------------------HHHHHHHHHHHHHHHHHHHHhHHHHhcc--------cCchhHHH
Q 017461 219 LSKWVPVAER--------------------------SRSLALVYSGMYLGSVTGLAFSPFLIHR--------FGWPSVFY 264 (371)
Q Consensus 219 i~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~~g~~~~~~l~~~--------~gw~~~f~ 264 (371)
+.|..+++++ ++..+.-...+.+|.++.-.+.-.+... .+-|..+.
T Consensus 151 LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~ 230 (477)
T PF11700_consen 151 LPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFL 230 (477)
T ss_pred hHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHH
Confidence 9999999988 8999998888888888877666554321 23488899
Q ss_pred HHhHHHHHHHHHHhhcccCCCCCC-CCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHh
Q 017461 265 SFGSLGTVWFTVWLSKAHSSPAED-PQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTW 343 (371)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (371)
+.++.-++..+..+++.|+.+..+ .+.....-..-.+ +-...++++.|.|.....+++++++.-+...+...
T Consensus 231 ~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~-------~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~ 303 (477)
T PF11700_consen 231 IVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFK-------RLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF 303 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHH-------HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888888888888888876632 1111111000000 01335666777889999999999999999999999
Q ss_pred hHHHHHHhcCCChhhhhhhhhhee
Q 017461 344 MPTYYNQVSSFGSKTLSETVQVCT 367 (371)
Q Consensus 344 ~~~~l~~~~g~s~~~~~~~~~~~~ 367 (371)
...|..+.+|++..+...+..+.+
T Consensus 304 ~~i~a~~~lg~s~~~l~~~~l~~~ 327 (477)
T PF11700_consen 304 AGIYATEVLGMSTTQLIVFGLVVQ 327 (477)
T ss_pred HHHHHHHhcCcCHHHHHHHHHHHH
Confidence 999999999999999777665544
No 174
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.38 E-value=7e-11 Score=111.02 Aligned_cols=158 Identities=11% Similarity=0.023 Sum_probs=102.3
Q ss_pred hhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh-hh-ccChhHH
Q 017461 121 VNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV-AA-KLGLPFL 197 (371)
Q Consensus 121 ~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-~~-~~~~~~l 197 (371)
+.+...+|. +.+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+.... .. ..+.+..
T Consensus 260 ~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 260 YTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 334455666 45668999889999999888888999999999999999999888776654443322211 11 1023322
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHH-HHHHHHHhHHHHhcccC-chhHHHHHhHHHHHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~ 275 (371)
+..-.+.+++.+...+....+++|++|++.|+.+.|+.+...++ +....|.+.+.+. ..| |...++..++..++.++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHH
Confidence 22223233333444455678889999999999999998766553 3445777777654 445 55555555555555544
Q ss_pred HHhh
Q 017461 276 VWLS 279 (371)
Q Consensus 276 ~~~~ 279 (371)
..++
T Consensus 419 ~~~~ 422 (432)
T PRK10406 419 VSLM 422 (432)
T ss_pred HHHH
Confidence 4443
No 175
>TIGR00898 2A0119 cation transport protein.
Probab=99.37 E-value=3.2e-11 Score=115.70 Aligned_cols=140 Identities=13% Similarity=-0.019 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcc
Q 017461 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (371)
Q Consensus 143 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 222 (371)
+......+...++.++.+++.||+|||+.+.++.++.+++.++..+.+..+.+..++..++.+++.+..++..+.+.+|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445567778889999999999999999999999999998888877622235556666777777777888889999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCC
Q 017461 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSP 285 (371)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 285 (371)
+|++.|+.++|+......+|.+++|.+.+ +. ..++..++++.+++.++..++.+ +.||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999998 44 35677788888877777666654 445543
No 176
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.37 E-value=4.5e-11 Score=110.17 Aligned_cols=169 Identities=17% Similarity=0.232 Sum_probs=134.9
Q ss_pred HHHHhhhhhhhhhhhhhhhhcC-CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh-hc
Q 017461 114 LLCNMDRVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AK 191 (371)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~ 191 (371)
++............+.+.++.| .+....+.+.++..++-++.-.+.+++..|+|.|+++.++.+.+++=..+.+.. +
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~- 295 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD- 295 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 3444444555566666677777 777788888888888999999999999999999999999999999988888887 4
Q ss_pred cChhHHHH----HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHH-HHHHHHHHHHHhHHHHhcccCc------h
Q 017461 192 LGLPFLLV----VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS-GMYLGSVTGLAFSPFLIHRFGW------P 260 (371)
Q Consensus 192 ~~~~~l~~----~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~~gw------~ 260 (371)
+.+...+ ...++|+..+..+.++..++.+.+|++.|+++.+++.. ..++|..+|..++|++.+.+|- .
T Consensus 296 -~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~ 374 (400)
T PF03825_consen 296 -PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWS 374 (400)
T ss_pred -CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHH
Confidence 4444333 35579999999999999999999999999999999866 5789999999999999998764 4
Q ss_pred hHHHHHhHHHHHHHHHHhhcccCC
Q 017461 261 SVFYSFGSLGTVWFTVWLSKAHSS 284 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~~~~~~~~~ 284 (371)
..+.+.+++.++..++++++.+|+
T Consensus 375 ~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 375 AVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCC
Confidence 455666666666666666655554
No 177
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.36 E-value=1.3e-11 Score=117.14 Aligned_cols=151 Identities=17% Similarity=0.037 Sum_probs=107.7
Q ss_pred hhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCc-------hhHHHHHHHHHHHHHHhhhhhccChhHH
Q 017461 126 AILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK-------AVLGFGVVWWSIATALTPVAAKLGLPFL 197 (371)
Q Consensus 126 ~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~~~~~~~~l 197 (371)
..|. +.+++|++..+.+++.+++.++..++.+++|+++||+||| ..+.+..++.+++.++..... +.+..
T Consensus 274 ~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~--~~~~~ 351 (476)
T PLN00028 274 IIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN--SLGAA 351 (476)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc--hHHHH
Confidence 3444 5677899999999999999999999999999999999865 233333333344444445555 56666
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
++..++.+++.+.......+++.+.. ++++|...|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.
T Consensus 352 ~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 352 IVVMILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHH
Confidence 66667777766655566666677765 578999999988877777777776644 2234569999999887777766655
Q ss_pred hhc
Q 017461 278 LSK 280 (371)
Q Consensus 278 ~~~ 280 (371)
++.
T Consensus 430 ~~~ 432 (476)
T PLN00028 430 AFI 432 (476)
T ss_pred Hhe
Confidence 544
No 178
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.36 E-value=4.5e-11 Score=109.71 Aligned_cols=244 Identities=15% Similarity=0.095 Sum_probs=184.6
Q ss_pred HHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCchh-HHHHHHHHHHHH
Q 017461 110 FSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAV-LGFGVVWWSIAT 183 (371)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~-~~~~~~~~~i~~ 183 (371)
.++-+............+.. +.+.+|+++..+|.+..+.-+.-++.-|+.|.++|| +||+|. ++.+.+-.++.+
T Consensus 18 g~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~ 97 (467)
T COG2211 18 GLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVA 97 (467)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHH
Confidence 33344444444444444444 677799999999999999999999999999999995 786654 567778888888
Q ss_pred HHhhhhhc----cChhHHHHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhc---
Q 017461 184 ALTPVAAK----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIH--- 255 (371)
Q Consensus 184 ~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~--- 255 (371)
.++..+++ .+....++...+.+++.......-.++.+|+.+ +++|.+..++-..+.++|.++...+...+..
T Consensus 98 ~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g 177 (467)
T COG2211 98 VLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFG 177 (467)
T ss_pred HHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88887773 356778888999999999999999999999976 7899999999999999987776666655543
Q ss_pred ----ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHH
Q 017461 256 ----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHF 331 (371)
Q Consensus 256 ----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (371)
..||+...++.++++.+..+++++-.+|+..+....++.. +.+....+..+++|+.+...++..+
T Consensus 178 ~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~-----------~~~~~~~~~~~~~Nrp~~~~l~~~l 246 (467)
T COG2211 178 GGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGV-----------KLKLKDSFLLIFKNRPLLLLLLMNL 246 (467)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcccc-----------cccHHHHHHHHHccchHHHHHHHHH
Confidence 3478888888888888888888888777765332211100 0111234456889999999999888
Q ss_pred HHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 332 CHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 332 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
+...+.+...+....|.+...|.+.....+.+.
T Consensus 247 ~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~ 279 (467)
T COG2211 247 LLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLL 279 (467)
T ss_pred HHHHHHHHHhhhhheeEEEEcCChHHHHHHHHH
Confidence 888888888888888888888887777755543
No 179
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.36 E-value=4.9e-11 Score=111.24 Aligned_cols=159 Identities=13% Similarity=0.107 Sum_probs=110.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh-HHHHHHHHHHHHHH
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATAL 185 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~i~~~~ 185 (371)
..+.+++.......+...+|.+.+++ +.+..+.+++.+...++..++.++.|+++||+++|+. +.+..++.+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~ 326 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH
Confidence 33344444444555667788877765 5677888999999999999999999999999998775 44444444444333
Q ss_pred hhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHH
Q 017461 186 TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFY 264 (371)
Q Consensus 186 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~ 264 (371)
..... +....+++-.+.++|.....+.......|.+|+++|++++|+.+....+|.+++|.+.+.+.+..| |++.|+
T Consensus 327 ~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 327 ASATD--HNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLW 404 (412)
T ss_pred HHhcC--CHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHH
Confidence 22222 322222222333333333334444555788999999999999999999999999999999999775 999988
Q ss_pred HHhHH
Q 017461 265 SFGSL 269 (371)
Q Consensus 265 ~~~~~ 269 (371)
+.+++
T Consensus 405 ~~~~~ 409 (412)
T TIGR02332 405 FVAAL 409 (412)
T ss_pred HHHHH
Confidence 76654
No 180
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.35 E-value=2.6e-11 Score=114.66 Aligned_cols=175 Identities=16% Similarity=0.153 Sum_probs=153.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC--CchhHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIA 182 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~ 182 (371)
.++...+...+..+...+....+|.+.++.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..++.++.+++
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 444555566666667777888899999999999999999999999999999999999999988 556667888888888
Q ss_pred HHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chh
Q 017461 183 TALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPS 261 (371)
Q Consensus 183 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 261 (371)
.+.+.+++ +++.++...++.|++.|........++.|..+.++-..+.|+...+.+++..+||+++|.+.|..| |..
T Consensus 379 ~~~~p~~~--~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~ 456 (509)
T KOG2504|consen 379 RLFLPFAT--TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDH 456 (509)
T ss_pred HHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeee
Confidence 89999999 999999999999999999888888899999999999999999999999999999999999988777 999
Q ss_pred HHHHHhHHHHHHHHHHhhcc
Q 017461 262 VFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~~~ 281 (371)
.|+..++..++..++.++..
T Consensus 457 ~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 457 AFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred ehhhcChHHHHHHHHHHHhH
Confidence 99999988777776655543
No 181
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.34 E-value=1e-10 Score=108.76 Aligned_cols=148 Identities=14% Similarity=0.156 Sum_probs=109.0
Q ss_pred hhhhhhhcCCCcchHHHHHHHHH-HHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh---hhhhccChhHHHHHHH
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVVRV 202 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~r~ 202 (371)
.+.+.+++|++..+++++..... ++..++.+++|++.||+|+|+.+.++.++.++..+.. ++.+ .+.+.++++-+
T Consensus 233 ~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~~~~~~~~~~~ 311 (402)
T PRK11902 233 TTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-KHLWTMALAIG 311 (402)
T ss_pred HHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CcHHHHHHHHH
Confidence 34567779999999999986654 5688999999999999999998887777666554433 3332 15565555543
Q ss_pred ----HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 203 ----FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 203 ----l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
+.|++.+...+....++.+.+|.++ .++.....++|..+++.++|.+.+..||+..|.+.++++++..++.+
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~ 387 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLW 387 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 4556666667777777887776544 45566666778777777899999999999999998888877766654
Q ss_pred h
Q 017461 279 S 279 (371)
Q Consensus 279 ~ 279 (371)
.
T Consensus 388 ~ 388 (402)
T PRK11902 388 L 388 (402)
T ss_pred H
Confidence 4
No 182
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.34 E-value=7e-11 Score=108.04 Aligned_cols=135 Identities=16% Similarity=0.088 Sum_probs=109.1
Q ss_pred hhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHHHHHHHHHHHhhhhhccChhHHHH
Q 017461 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLV 199 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~ 199 (371)
......+|.+.++.|.+..+.+++.+...++..++.++.|++.||+ +||+.+.++.++.+++.+++.+.. +.+...
T Consensus 214 ~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~- 290 (355)
T TIGR00896 214 YSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP--MHGLWA- 290 (355)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh--hhHHHH-
Confidence 3344567777777899999999999999999999999999999999 566677788888888877777765 433222
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
..++.|++.+...+...+.+.+..+ +++++...++......+|..++|.+.|.+.++.|
T Consensus 291 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 291 WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4578899999888887777765554 5667889999998899999999999999998776
No 183
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.34 E-value=4.3e-11 Score=125.97 Aligned_cols=149 Identities=15% Similarity=0.166 Sum_probs=125.6
Q ss_pred hhhh-hhhhhcCCCcc-hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 125 IAIL-PMSAEFNWNPA-TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 125 ~~~~-~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
..+| .+.+.+|.+.. ..+++.+...++.+++.+++|++.||+++++++.++.++.+++.++..+.. +.+.++++.+
T Consensus 253 ~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 330 (1146)
T PRK08633 253 ANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--SLASVLVLFF 330 (1146)
T ss_pred HhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHH
Confidence 3344 45677899998 999999999999999999999999999999999999998888888888888 8888999999
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-ccCchhHHHHHhHHHHHHHH
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~~~f~~~~~~~~~~~~ 275 (371)
+.|++.+...+...+++.+.+|++.||+++|+.+....+|.++++.+++.+.. .+++...|++.+.+.++..+
T Consensus 331 ~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 404 (1146)
T PRK08633 331 LFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTL 404 (1146)
T ss_pred HHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 99999999888999999999999999999999999999999888888877654 23455566665555444333
No 184
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.33 E-value=5.6e-11 Score=110.41 Aligned_cols=152 Identities=15% Similarity=0.156 Sum_probs=119.5
Q ss_pred hhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh-hhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHH
Q 017461 125 IAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (371)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 203 (371)
...|.+.++.+.++.+.+++.+...++...+..+.+++.| |++.++.+..+.++.+++.++.++++ +++.+++..++
T Consensus 229 ~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--NLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHH
Confidence 4567766665557788999988888777766666677665 56767777888888888888888888 78878888888
Q ss_pred HHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc---Cc-hhHHHHHhHHHHHHHHHHh
Q 017461 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF---GW-PSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~---gw-~~~f~~~~~~~~~~~~~~~ 278 (371)
.|++.+...+...+++.+..|+++||+++|+.+....+|..+||.++|.+.++. ++ ...|++.++++++..+...
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 999988888888999999999999999999999999999999999999998863 33 4555555555555544433
No 185
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.32 E-value=2.6e-11 Score=108.06 Aligned_cols=172 Identities=17% Similarity=0.091 Sum_probs=134.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
+++.++........++..+|. ++++|++++.+.|.+...+.+...+..+.+|+++||+|.++++......++++..+.+
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~ 302 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLS 302 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHH
Confidence 344444444455556666666 6788999999999999999999999999999999999999999999999988888777
Q ss_pred hhhc-----cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chh
Q 017461 188 VAAK-----LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPS 261 (371)
Q Consensus 188 ~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~ 261 (371)
+... .+....++..+..++..|........++..++ +++-|.+.|+.+...++|+..-|..-+...+..| +..
T Consensus 303 ~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~ 381 (417)
T COG2223 303 LFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTG 381 (417)
T ss_pred ccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHH
Confidence 6641 14555555455555555555556667777777 4588999999999999999999999998888777 899
Q ss_pred HHHHHhHHHHHHHHHHhhcc
Q 017461 262 VFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 262 ~f~~~~~~~~~~~~~~~~~~ 281 (371)
.|++...+.+++.++.+...
T Consensus 382 ~f~~~~~~~~~a~v~~~~~y 401 (417)
T COG2223 382 AFMLLLAFYLVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877665543
No 186
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.32 E-value=1.1e-10 Score=110.82 Aligned_cols=172 Identities=12% Similarity=0.038 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhH--------HHHHH
Q 017461 107 VLCFSAFLLCNMDRVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL--------GFGVV 177 (371)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~--------~~~~~ 177 (371)
....+..+........+...+|.+ .+.+|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+..
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 343 (465)
T TIGR00894 264 WAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIG 343 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Confidence 344444455555555555666764 567899999999999999999999999999999998755321 11111
Q ss_pred HHHHHHHH--hhh-hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 178 WWSIATAL--TPV-AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 178 ~~~i~~~~--~~~-~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
+...+..+ ... .. +.+..+++-.+.+.+.++..+.......|..| +.+|.+.++.+....+|..++|.+.+.+.
T Consensus 344 ~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~ 420 (465)
T TIGR00894 344 GLGPGIFAYALPYLSA--AFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNIL 420 (465)
T ss_pred HHHHHHHHHHHHHcCC--chHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheee
Confidence 11111111 112 22 34444555555566555555555556667775 58999999999999999999999999887
Q ss_pred ccc---CchhHHHHHhHHHHHHHHHHhhcc
Q 017461 255 HRF---GWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 255 ~~~---gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
+.. +|...|.+.+++.++..++..+..
T Consensus 421 ~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 421 SQDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 643 388889888877777666555443
No 187
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.4e-10 Score=97.78 Aligned_cols=155 Identities=12% Similarity=0.101 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH-HH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSI-AT 183 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i-~~ 183 (371)
++.++++.+.+..+-.. ......+++.||+|+...+.+.+......++.+++.|.++||+|++...+.+..+..+ +-
T Consensus 268 ~~~iicv~yyva~fPFi--~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H 345 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFI--TLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGH 345 (459)
T ss_pred HHHHHHHHHHHHHHHHh--hhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHh
Confidence 34444444444333322 2223347899999999999999999999999999999999999999877766555444 33
Q ss_pred HHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC---ch
Q 017461 184 ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WP 260 (371)
Q Consensus 184 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~ 260 (371)
....++ ++.=.++..+.|+............++-..|+++.|++.|..+...++|.++.|+++|++.+.-| |-
T Consensus 346 ~~l~Ft----~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 346 SGLFFT----FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred hhHHhh----hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhH
Confidence 444443 23345567788888887766678889999999999999999999999999999999999998654 44
Q ss_pred hHHHH
Q 017461 261 SVFYS 265 (371)
Q Consensus 261 ~~f~~ 265 (371)
-+|.+
T Consensus 422 e~ffl 426 (459)
T KOG4686|consen 422 EAFFL 426 (459)
T ss_pred HHHHH
Confidence 44443
No 188
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.31 E-value=1e-10 Score=104.45 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
..+++.-..+.++. ..++......-..++|++..++.++.....+..+++++++|+|.||+|.|+++.++.++..+.++
T Consensus 255 ~~FLiA~~~~~DGv-~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~ 333 (438)
T COG2270 255 VLFLIARFFYIDGV-NTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAAL 333 (438)
T ss_pred HHHHHHHHHHHhhH-HHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHH
Confidence 33333333344433 33344434445569999999999999999999999999999999999999999999999999998
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVF 263 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f 263 (371)
...+.. .-..+.++..+.|+..|..+..+.++.++..|+++-++.+|++......+..+||++.+.+.+..| -|..+
T Consensus 334 ~~~~~~--~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~ 411 (438)
T COG2270 334 YLIFLE--GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGV 411 (438)
T ss_pred HHHHcc--ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHH
Confidence 888887 677788888999999999999999999999999999999999999999999999999999887554 56666
Q ss_pred HHHhHHHHHHHHH
Q 017461 264 YSFGSLGTVWFTV 276 (371)
Q Consensus 264 ~~~~~~~~~~~~~ 276 (371)
....++..+.+++
T Consensus 412 ~~i~vll~iGl~~ 424 (438)
T COG2270 412 LSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHHHHhhHhh
Confidence 6555444443333
No 189
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.30 E-value=3.4e-11 Score=111.98 Aligned_cols=256 Identities=17% Similarity=0.140 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcc-hHHHHHH----HHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPA-TVGLIQS----SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s----~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
......++-.+..++.........+.....++.+.. ..+.... ...+...+.++..|.++||+|||..+.+..+.
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~ 101 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFG 101 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHH
Confidence 344455555555555555555556665555543222 2233333 33678889999999999999999999999999
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhh--hchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGE--GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~--~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 256 (371)
..+..+...+.. +|.++ +.|+.. +.......++++|....++|...+|+....+..+..++|.+++.+...
T Consensus 102 ~~l~~~~~~~~~---~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~ 174 (463)
T KOG2816|consen 102 TILPALCLLFQG---YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKF 174 (463)
T ss_pred HHHhHHHHHHHH---HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 888888877765 44444 444432 345677889999999999999999999999999999999999999999
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhc-cCCCCcccchhhhhhcChhHHHHHHHHHHHHH
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSC-ASKEPVKTIPWGLILSKPPVWALIVSHFCHNW 335 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 335 (371)
+|.-.+|.+.++..++..+..+++.||+..++............... ..............-.+|..+.+++..++...
T Consensus 175 ~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~ 254 (463)
T KOG2816|consen 175 LGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSL 254 (463)
T ss_pred cCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHH
Confidence 99999999999999999888888888876654433100000000000 00000000111111223455555555555444
Q ss_pred HHHHHHH-hhHHHHHHhcCCChhhhhhhhhhe
Q 017461 336 GTFILLT-WMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 336 ~~~~~~~-~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
....-.. .++.|+...+|++..+.+.+.+..
T Consensus 255 ~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~ 286 (463)
T KOG2816|consen 255 PEAGGASDVLLLYLKAKFGWNKKEFSDLLSLV 286 (463)
T ss_pred HHhcCceeEEEEEEeeecCcCHHHHHHHHHHH
Confidence 4433222 446677777888888888665544
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=99.30 E-value=6.7e-11 Score=111.69 Aligned_cols=138 Identities=18% Similarity=0.133 Sum_probs=109.3
Q ss_pred hhhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHH
Q 017461 122 NMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (371)
Q Consensus 122 ~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 200 (371)
......+.+ ++.+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+..+++.+++.
T Consensus 246 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~ 325 (448)
T PRK09848 246 AVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVA 325 (448)
T ss_pred HHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHH
Confidence 344445544 4456765554555555556778889999999999999999999999998888877776543367777788
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCc-------chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVA-------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.++.|+|.+...+...++.+|..+.+ ++|...|+.+....+|..+|+.+.+.+.+..|+
T Consensus 326 ~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 326 LAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 89999999999999999998888643 459999999999999999999999988776655
No 191
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.30 E-value=3.5e-11 Score=104.93 Aligned_cols=132 Identities=12% Similarity=0.120 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccCh--hHHHHHHHHHHhhhhchhhhHHHHHhcccCCc
Q 017461 149 FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL--PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA 226 (371)
Q Consensus 149 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 226 (371)
.+.-..|.++.+++.||+|||+.+.++.+++++..++...+...|. .+++++|++ ..+.+.+.+.|..|.+|.+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~araf----isg~fqvaYvYtPEVyPTa 466 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAF----ISGAFQVAYVYTPEVYPTA 466 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHH----HhchheEEEEecCcccchh
Confidence 4566788899999999999999999999999999988887773332 233344544 4445667788999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCC
Q 017461 227 ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
.|+.+.|.-.....+|+++.|+++ +.....-..+..+.+.++++..++..+++-|++.
T Consensus 467 vRatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 467 VRATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred hhhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999999999999999 3333344556777788888888888777666544
No 192
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.29 E-value=7.5e-11 Score=123.92 Aligned_cols=152 Identities=12% Similarity=0.050 Sum_probs=122.8
Q ss_pred hhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh------------
Q 017461 123 MSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA------------ 189 (371)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~------------ 189 (371)
+...+|.+ .+.+|.+..+.|++.+++.++.+++.++.|+++|+.++++.+..+.++.+++.+.+.+.
T Consensus 244 ~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (1140)
T PRK06814 244 VLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLK 323 (1140)
T ss_pred HHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhccccccccccccc
Confidence 33445554 55689999999999999999999999999999999888877777766666655544442
Q ss_pred --------hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc-ccCch
Q 017461 190 --------AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH-RFGWP 260 (371)
Q Consensus 190 --------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~gw~ 260 (371)
. +.|.++++.++.|++.+...+...+++.+.+|++.||+++|+.+....+|..+++++++.+.+ ..++.
T Consensus 324 ~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~ 401 (1140)
T PRK06814 324 SILVFLSKR--HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIP 401 (1140)
T ss_pred chhhhhccc--ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 4 678888899999999999999999999999999999999999999999999999999998874 45666
Q ss_pred hHHHHHhHHHHHHHHH
Q 017461 261 SVFYSFGSLGTVWFTV 276 (371)
Q Consensus 261 ~~f~~~~~~~~~~~~~ 276 (371)
..|++.+++.++..++
T Consensus 402 ~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 402 WIILFIALANLIVAIL 417 (1140)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6666655554444333
No 193
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.27 E-value=7.1e-10 Score=99.25 Aligned_cols=224 Identities=14% Similarity=0.136 Sum_probs=158.2
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC-----CchhHH-HHHHHHHHHHHHhhhhh----c-------
Q 017461 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG-----GKAVLG-FGVVWWSIATALTPVAA----K------- 191 (371)
Q Consensus 129 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~~~-~~~~~~~i~~~~~~~~~----~------- 191 (371)
.+..|++++....+.+.+...+.. ...+.+|..+|+.+ ||..++ .|.++.+.+..+..++. .
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~ 83 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSG 83 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccc
Confidence 466789999999999998887764 57999999999998 775544 56666666655544431 1
Q ss_pred cC-h--hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhH---HHH
Q 017461 192 LG-L--PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV---FYS 265 (371)
Q Consensus 192 ~~-~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~---f~~ 265 (371)
.. . ....+...+.|+|.+...+...++++|..|+++|+++.++.....-+|.+++..+.+.+.+.+.-.-. +..
T Consensus 84 ~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 84 PFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred ccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 11 2 23445578889999988999999999999999999999999999999999999999998887653222 222
Q ss_pred HhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhH
Q 017461 266 FGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMP 345 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (371)
.+++.++..++. .+..|++..+.... .+++++.....+++++.+|....+++..++..+.++.--..+-
T Consensus 164 ~a~i~~~l~~ia-~wg~E~r~~~~~~~----------~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLE 232 (403)
T PF03209_consen 164 VALIALLLNLIA-LWGQEPRRSRRAAA----------AERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILE 232 (403)
T ss_pred HHHHHHHHHHHH-HHhcccCCcccccC----------CCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcC
Confidence 222322222222 22333333222200 0112222345677888899999888888888888888888888
Q ss_pred HHHHHhcCCChhhhhhhhh
Q 017461 346 TYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 346 ~~l~~~~g~s~~~~~~~~~ 364 (371)
.|--+++|++..+..-+..
T Consensus 233 Pygg~Vfgmsv~eTT~Lta 251 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTA 251 (403)
T ss_pred CchhHHcCCCHHHHHHHHH
Confidence 8888999999988776544
No 194
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.26 E-value=3e-10 Score=105.34 Aligned_cols=134 Identities=11% Similarity=0.072 Sum_probs=97.1
Q ss_pred hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhh
Q 017461 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 130 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 209 (371)
+.+++|.+..+.+.+.+...++..++.++.|++.||+|+|+++.++.++..++.++..+.+ +.+..++.-++.+.|.+
T Consensus 230 ~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~g~~ 307 (392)
T PRK10473 230 LMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP--SHAVSLFGITLICAGFS 307 (392)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999988888888776 55555555555555544
Q ss_pred chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHH
Q 017461 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 270 (371)
...+.. ...+..|.++|+ +.......++..+|+.+++++.+..|+.....+.+.+.
T Consensus 308 ~~~~~~--~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~~~g~~~~~~~~~~~~ 363 (392)
T PRK10473 308 VGFGVA--MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAAVLGISAWNMLIGILI 363 (392)
T ss_pred HHhHHH--HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 433332 334445544443 44445566777778888888888778766555544433
No 195
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.26 E-value=1.1e-10 Score=111.30 Aligned_cols=135 Identities=13% Similarity=0.166 Sum_probs=114.9
Q ss_pred hhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh--hhccChhHHHH
Q 017461 123 MSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV--AAKLGLPFLLV 199 (371)
Q Consensus 123 ~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~ 199 (371)
.....|.+ ++.+|.+..+.+++.....++..++.++.|++.||+|||+++.++.++.+++.++..+ .++.+++.+++
T Consensus 274 ~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (485)
T TIGR00711 274 SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIAL 353 (485)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHH
Confidence 34455654 4568999999999999999999999999999999999999999999988888877663 22225677778
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
..++.|+|.+...+.......+..|+++|+.+.++......+|..+|+.+.+.+.++.
T Consensus 354 ~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 354 PQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999888777788888899999999999999999999999999999887753
No 196
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.25 E-value=4.3e-11 Score=109.31 Aligned_cols=148 Identities=18% Similarity=0.183 Sum_probs=134.9
Q ss_pred hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhh
Q 017461 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 130 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 209 (371)
-.|+.+-.+...|........+-++.-++.+++..|+|+-+++.+++.+.++=.+..+..+ |.|..+..-+++|+..+
T Consensus 397 Hled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--n~W~vLPieilqgit~a 474 (618)
T KOG3762|consen 397 HLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--NPWMVLPIEILQGITHA 474 (618)
T ss_pred HHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc--CchheeeHHHHHHHHHH
Confidence 3566776777888888888888999999999999999999999999999999999999999 99999999999999999
Q ss_pred chhhhHHHHHhcccCCcchHHHHHHHH-HHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 210 VAMPAMNNILSKWVPVAERSRSLALVY-SGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
.+|.+..+|+++..|++-|+.+.++.+ ...++|-.+|.++||.+.+.+|-|..|++.++.+++.+++...
T Consensus 475 liWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 475 LIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999974 5578999999999999999999999999999988887776554
No 197
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.24 E-value=3e-10 Score=104.84 Aligned_cols=140 Identities=15% Similarity=0.248 Sum_probs=105.4
Q ss_pred hhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc---cChhHHHH
Q 017461 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK---LGLPFLLV 199 (371)
Q Consensus 124 ~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~---~~~~~l~~ 199 (371)
....|. +.+++|.++.+.+++.+...++..++.++.|++.||+|+|+.+.++.++..++.+++.+... .+.+.+++
T Consensus 226 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (385)
T TIGR00710 226 FSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIG 305 (385)
T ss_pred HHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 334454 45688999999999999999999999999999999999999999888888877766655421 13455566
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHH-HHHHHHHhHHHHhcccCchhHHHH
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYL-GSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
..++.|++.+...+.......|..| ++|+++.++.+..... |.+.++.+ +.+.+..+|...+..
T Consensus 306 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~-~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 306 PMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLV-SLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHH-HhccccChHHHHHHH
Confidence 6788999999888888889899885 6899999998777654 55555554 455444445444443
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.24 E-value=7e-10 Score=102.84 Aligned_cols=147 Identities=17% Similarity=0.097 Sum_probs=117.1
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhh
Q 017461 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE 208 (371)
Q Consensus 129 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~ 208 (371)
.+++.+|.++.+.|++.+...++..+++++.+++.||+++|+++..+.+ .++..++..+.+ +++.+++..++.|++.
T Consensus 231 ~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~--~~~~~~~~~~~~G~~~ 307 (393)
T PRK11195 231 WAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH--SLLPAYPLLILIGALG 307 (393)
T ss_pred HHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh--HHHHHHHHHHHHHHhh
Confidence 3566789999999999999999999999999999999999998888753 444555556666 7777788888999998
Q ss_pred hchhhhHHHHHhcccCCcc-hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 209 GVAMPAMNNILSKWVPVAE-RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 209 ~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
+...+...+.+.+..|++. +|++.++.+....+|..++..+.+.+ +.+|-+..+.+.+...++.+.+.+.
T Consensus 308 g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK11195 308 GFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALL 378 (393)
T ss_pred hhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888766554 79999999999999999999998865 5678777777655544444444433
No 199
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.24 E-value=4.9e-10 Score=106.45 Aligned_cols=143 Identities=10% Similarity=0.021 Sum_probs=110.2
Q ss_pred HhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh---hhccC
Q 017461 117 NMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---AAKLG 193 (371)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~ 193 (371)
...........+++.+...-+....+++.++..++.+++.++++++.||+|+|+.+.++.++.+++.+...+ ....+
T Consensus 244 ~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (473)
T PRK10429 244 NIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHN 323 (473)
T ss_pred HHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchh
Confidence 334444555555665554446667778888777899999999999999999999999888877766655433 12125
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccC-------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.+.+++.-++.|++.+...+...++++|..+ .++.|..+|+.....-+|..+++.+.|++.+..|+
T Consensus 324 ~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 324 ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7777888899999999999999999999955 34457789999999999999999999998876655
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=99.22 E-value=6.7e-10 Score=104.36 Aligned_cols=140 Identities=10% Similarity=0.037 Sum_probs=114.9
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhc
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.+ +. ..+..-++.|++.+.
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--~~-~~~~~~~l~glg~~~ 363 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG--GH-VGLIALTLCSAFMSI 363 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--Ch-HHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999999999888887777766666 54 335567889999999
Q ss_pred hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHHHHhHHHHHHHH
Q 017461 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~ 275 (371)
.+|...+...+.++ ++.+.+.++... ..+|..++|++.|.+.+..| -+..|++..+..+....
T Consensus 364 i~P~~~s~a~~~~~-~~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 364 QYPTIFSLGIKNLG-QDTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHcccc-hhhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 99999999999985 456777887764 44688889999999999887 78888865554444333
No 201
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.21 E-value=1.2e-09 Score=101.60 Aligned_cols=165 Identities=10% Similarity=0.006 Sum_probs=113.1
Q ss_pred hhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh-hhh---ccCh
Q 017461 119 DRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP-VAA---KLGL 194 (371)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~-~~~---~~~~ 194 (371)
.+..++..+|.+.++ ..+.........+..+...+..+++|+++||+|+|+++.++.++.+++..... ..+ ..++
T Consensus 267 ~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~ 345 (462)
T PRK15034 267 SFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNF 345 (462)
T ss_pred HHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHH
Confidence 333345455554433 22233333334455678889999999999999999999999887777664322 222 1146
Q ss_pred hHHHHHHHHHHhhhhchhhhHHHHHhcccCC---------------------cchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 195 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPV---------------------AERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 195 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~---------------------~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
+.+.++.+...++.|........++.+++|. ++-|.+.|+.+....+|+.+.|.+-+..
T Consensus 346 ~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~ 425 (462)
T PRK15034 346 IAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMS 425 (462)
T ss_pred HHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHH
Confidence 6666666665566666666777777777763 2567889999999999999999877777
Q ss_pred hccc-CchhHHHHHhHHHHHHHHHHhhcccCC
Q 017461 254 IHRF-GWPSVFYSFGSLGTVWFTVWLSKAHSS 284 (371)
Q Consensus 254 ~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~ 284 (371)
.+.. ++...|++..+..+++.++.+.+.-++
T Consensus 426 ~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 426 LNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 6654 488888888888888887777665443
No 202
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.21 E-value=3.8e-10 Score=107.83 Aligned_cols=132 Identities=13% Similarity=0.117 Sum_probs=113.5
Q ss_pred hhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh-ccChhHHHHHH
Q 017461 124 SIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA-KLGLPFLLVVR 201 (371)
Q Consensus 124 ~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~~r 201 (371)
....|. +++.+|.++.+.|+....+.++..++.++.|++.||+|+|+.+..+.++.+++.++..+.. ..+.+...+..
T Consensus 279 ~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~ 358 (495)
T PRK14995 279 ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLM 358 (495)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHH
Confidence 344454 5667899999999999999999999999999999999999999999988888876655432 12566677788
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
++.|+|.|...+.....+.+..|+++++.+.++++....+|..+|+.+.+.+.+
T Consensus 359 ~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 359 ALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888888889999999999999999999999999999999998866
No 203
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.20 E-value=8.8e-10 Score=103.44 Aligned_cols=150 Identities=15% Similarity=0.134 Sum_probs=123.5
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
.++..++............+++.++ +| ++...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..
T Consensus 230 l~~~~~~~~~~~~~~~~~~~y~~~~vl~-~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~ 308 (428)
T PF13347_consen 230 LLLAFFLQWLAFALMNTFLPYYFTYVLG-NEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLF 308 (428)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHHHHHhc-CchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHH
Confidence 3333444445555556666666555 55 447788888999999999999999999999999999999999999998888
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCC-------cchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-------AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+.+..|.+.+++..++.|++.+.......++++|..+. ++.|...|+......+|..+++.+.+.+.+..|+
T Consensus 309 ~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 309 FLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred HHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 87533899999999999999999999999999998863 3458999999999999999999999988776554
No 204
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.19 E-value=1.1e-09 Score=100.45 Aligned_cols=158 Identities=11% Similarity=-0.033 Sum_probs=109.6
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCc---hhHH-HHHHHHHHHHHHhhh
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK---AVLG-FGVVWWSIATALTPV 188 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr---~~~~-~~~~~~~i~~~~~~~ 188 (371)
.++.....+.+...+|.+.++.|.+.. .+...++..++..++ .++++||+.|| +... ...++.+++..+..+
T Consensus 201 ~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~ 276 (368)
T TIGR00903 201 LGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAF 276 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444555677887777777754 566555555555544 46777776543 3333 244444544445455
Q ss_pred hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 189 AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 189 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
.. +.+..++.-.+.|++.....+..+++.+|.+|++.|+++.|+.+....+|..++|++.+.+.. |-...|.+.++
T Consensus 277 ~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~ 352 (368)
T TIGR00903 277 EL--NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAI 352 (368)
T ss_pred cc--ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHH
Confidence 54 444555566777777777777888999999999999999999999999999999999987774 67788888887
Q ss_pred HHHHHHHHHh
Q 017461 269 LGTVWFTVWL 278 (371)
Q Consensus 269 ~~~~~~~~~~ 278 (371)
+.++..+..+
T Consensus 353 ~~~i~~~~~~ 362 (368)
T TIGR00903 353 LITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHH
Confidence 7777666654
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.18 E-value=5.8e-10 Score=102.00 Aligned_cols=121 Identities=15% Similarity=0.089 Sum_probs=99.0
Q ss_pred hhhhhhhhhhhhhhcCCCcchHHHHHHHHH-HHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh-hc------
Q 017461 120 RVNMSIAILPMSAEFNWNPATVGLIQSSFF-WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AK------ 191 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~------ 191 (371)
........|.+.+++|.+..+.+.+.++.. ++..++.+++|++.||+|+|+.+.++.++.+++..+..+. ..
T Consensus 225 ~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (356)
T TIGR00901 225 DSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGI 304 (356)
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 334445566666669999999998888766 5778999999999999999999999888888877665543 10
Q ss_pred --cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHH
Q 017461 192 --LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY 240 (371)
Q Consensus 192 --~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 240 (371)
.+.+.++.+.++.+++.+...+...+++.|.+|+++||+.+|+.+...+
T Consensus 305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 305 TFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 1467788889999999999999999999999999999999999887654
No 206
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.17 E-value=2.8e-09 Score=101.20 Aligned_cols=174 Identities=14% Similarity=0.114 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhh-hhcCCCcc----hHHHHHHHHHHHHHHHHHHHHHhhhhhCC-----chhH--HH
Q 017461 107 VLCFSAFLLCNMDRVNMSIAILPMS-AEFNWNPA----TVGLIQSSFFWGYLLTQIAGGIWADTVGG-----KAVL--GF 174 (371)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-----r~~~--~~ 174 (371)
..+++..++...........++... ++.+.+.. ..+++.++..+...+.+++..++..+.+| +... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 3333333343444444444444433 33443322 27788898999888888886654444433 3444 77
Q ss_pred HHHHHHHHHHHhhh---------hhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHH
Q 017461 175 GVVWWSIATALTPV---------AAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVT 245 (371)
Q Consensus 175 ~~~~~~i~~~~~~~---------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (371)
|.++.+++.+..++ .. |+|++++..++.|+|.....|...+++.+..|++.||+++|++.....+|..+
T Consensus 355 G~~l~~~~~~~~~~~~~~~~~~~~~--s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l 432 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFADAGGLT--SPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLL 432 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCcc--CHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877765 34 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhccc
Q 017461 246 GLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (371)
Q Consensus 246 g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 282 (371)
++.+.....+..+|.+.|...+++.++..++.++..|
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 433 GGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877778998888888877777666655433
No 207
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.16 E-value=5.7e-10 Score=101.54 Aligned_cols=129 Identities=18% Similarity=0.265 Sum_probs=109.9
Q ss_pred hhhhhhhhhhhh-hhhcCCC-cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc-Chh
Q 017461 119 DRVNMSIAILPM-SAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL-GLP 195 (371)
Q Consensus 119 ~~~~~~~~~~~~-~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~-~~~ 195 (371)
.........|.+ .+++|.+ ..+.+++.++..++..++.++.|++.||+|+|+.+.+......++.+...+.... +..
T Consensus 221 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (352)
T PF07690_consen 221 VFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPV 300 (352)
T ss_dssp HHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHH
T ss_pred HHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 333466667764 8889999 7899999999999999999999999999999888888877777777666555421 456
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGL 247 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~ 247 (371)
..++..++.|++.+...+....++.|.+|+++||++.|+.....++|..+||
T Consensus 301 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 301 WLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7777889999999999999999999999999999999999999999999987
No 208
>PRK11043 putative transporter; Provisional
Probab=99.16 E-value=2.8e-09 Score=99.16 Aligned_cols=137 Identities=15% Similarity=0.126 Sum_probs=104.3
Q ss_pred hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh---hhhhccChhHHHHH
Q 017461 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT---PVAAKLGLPFLLVV 200 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~~ 200 (371)
....|.+.+++|.+..+.++......++..++.++.+++.||+|+|+.+..+.++.+++.+.. .+....+++.+++.
T Consensus 223 ~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (401)
T PRK11043 223 LTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIP 302 (401)
T ss_pred HHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 344666777889999999998888889999999999999999999987766555544443322 22111156666667
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchh
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 261 (371)
..+.|++.+...+.......+..| +++|++.|+++.....+..+++.+.+.+.+......
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 303 FCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccCCChhHH
Confidence 788899888888888888878775 689999999999888888889888888877433333
No 209
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.15 E-value=3.1e-09 Score=94.25 Aligned_cols=159 Identities=29% Similarity=0.528 Sum_probs=128.9
Q ss_pred HHHhhhhhhhhhhhhhhhhcCCCc--chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc
Q 017461 115 LCNMDRVNMSIAILPMSAEFNWNP--ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL 192 (371)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 192 (371)
....+........+.+..+++.+. ...++..+.+.++..++.++.|.+.||+|||+.+..+.....++.+++.+....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (338)
T COG0477 13 LLGLDLGLLSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNV 92 (338)
T ss_pred HHHHhcchHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccc
Confidence 333555666677788888887666 489999999999999999999999999999988888887766666777777611
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCC-cchHHHHHHHHH-HHHHHHHHHHHhHHHHhcc--cCchhHHHHHhH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYS-GMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGS 268 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~ 268 (371)
+.+.+++.|++.|++.+...+...+++.|+++. ++|+...+.... ...+|..+++.+++.+... .+||+.|.+...
T Consensus 93 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (338)
T COG0477 93 GLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAAL 172 (338)
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 388999999999999999999999999999987 688999999888 5888899999888777654 579997777666
Q ss_pred HHHHH
Q 017461 269 LGTVW 273 (371)
Q Consensus 269 ~~~~~ 273 (371)
.....
T Consensus 173 ~~~~~ 177 (338)
T COG0477 173 LGLLL 177 (338)
T ss_pred HHHHH
Confidence 55443
No 210
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.13 E-value=5.2e-09 Score=91.72 Aligned_cols=177 Identities=12% Similarity=0.086 Sum_probs=141.3
Q ss_pred ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHHHH
Q 017461 100 PKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVW 178 (371)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~ 178 (371)
+..|.+.+.+.+ ..+..++.-..+|.+..|-|+|..+.|+..+...+.....++....+.+|. ++|+..+...++
T Consensus 208 ~~aW~vtLfmGl----qS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 208 PLAWQVTLFMGL----QSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred chhHHHHHHHHh----hHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 344554443333 334456667789999999999999999999999999999999999999965 578888888899
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCC-cchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPV-AERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
+.++.+.+.+.+..+++. . -++.|+|.|..++.+..++.+..+. ++-+...|+.+....+=..+||++.|++-|..
T Consensus 284 ~l~G~~G~~~~P~~~~~l--w-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~ 360 (395)
T COG2807 284 MLVGLVGLLLAPGQLPIL--W-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT 360 (395)
T ss_pred HHHHHHHHHHhhhhHHHH--H-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc
Confidence 999999988888432222 2 4999999999999999999888864 44466677888888888899999999999965
Q ss_pred -CchhHHHHHhHHHHHHHHHHhhcccC
Q 017461 258 -GWPSVFYSFGSLGTVWFTVWLSKAHS 283 (371)
Q Consensus 258 -gw~~~f~~~~~~~~~~~~~~~~~~~~ 283 (371)
+|...++..+...+++.+.-+..-|+
T Consensus 361 gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 361 GSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred CChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 59999998888888877776665443
No 211
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.12 E-value=3.4e-09 Score=97.68 Aligned_cols=123 Identities=15% Similarity=0.077 Sum_probs=89.0
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh--hccChhHHHHHHHHHHh
Q 017461 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA--AKLGLPFLLVVRVFMGI 206 (371)
Q Consensus 129 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~~~l~~~r~l~G~ 206 (371)
.+.+.+|.+..+.+++.+...++..++.++.|++.||+|+|+.+.++.++..+..+..... .+.+.+.+.++-.+.+.
T Consensus 220 ~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (377)
T PRK11102 220 VYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVG 299 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3566789999999999999999999999999999999999999998887654433322211 11145555555555555
Q ss_pred hhhchhhhHHHHHhcccCCcchHHHHHHHHHH-HHHHHHHHHHhHHH
Q 017461 207 GEGVAMPAMNNILSKWVPVAERSRSLALVYSG-MYLGSVTGLAFSPF 252 (371)
Q Consensus 207 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~-~~~g~~~g~~~~~~ 252 (371)
+.+........++.|..| ++++.+.++.... ..+|..+++.+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~~~~ 345 (377)
T PRK11102 300 CVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALLSLA 345 (377)
T ss_pred HHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 555556666677888775 7899999886554 55777777766543
No 212
>PRK09669 putative symporter YagG; Provisional
Probab=99.11 E-value=2.3e-09 Score=101.13 Aligned_cols=136 Identities=12% Similarity=0.091 Sum_probs=102.0
Q ss_pred hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHH
Q 017461 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 203 (371)
+....++.++.--+.+..+.+.....++..++.+++++++||+|+|+.+.++.++.+++.+...+.+..+.+.+++..++
T Consensus 249 ~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 328 (444)
T PRK09669 249 GGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNIL 328 (444)
T ss_pred hhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHH
Confidence 33334444433223444555666777888889999999999999999999888766654443333322267778888899
Q ss_pred HHhhhhchhhhHHHHHhcccC-------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 204 MGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
.|++.+...+...++++|..+ .++.|...++...+..+|..+|+.++|.+.+..|+
T Consensus 329 ~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 329 FNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999998875 23346778899999999999999999999887766
No 213
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=9e-09 Score=92.15 Aligned_cols=223 Identities=16% Similarity=0.040 Sum_probs=165.9
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh-HHHHHHHHHHHHHHhhhhhc-cChhHHHHHHHHHHhhhhchhhhH
Q 017461 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMGIGEGVAMPAM 215 (371)
Q Consensus 138 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~ 215 (371)
.+..+...++..+..++.+|+.|.++|+.|+||. +-....+..++.++..+++. ..++..++...+..++..+..+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 3456888889999999999999999999996655 55667777777788888874 235556666788888888888999
Q ss_pred HHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHH--HHh----------------cccCchhHHHHHhHHHHHHHHHH
Q 017461 216 NNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP--FLI----------------HRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 216 ~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~--~l~----------------~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
.+++.+..++++-++..++-.....+|.++.-++.- ++. +...-|.++.+.++..++..+..
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 999999999888888888877777777666544431 111 22346888999999988888888
Q ss_pred hhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChh
Q 017461 278 LSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSK 357 (371)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~ 357 (371)
+...++.+.........-.+. -++....++++.+++.+....++.+++.-+.++...+...|....+|++..
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g--------~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~ 288 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNG--------FKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSST 288 (438)
T ss_pred HhcccccccccccchHHHHHH--------HHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHH
Confidence 888877664321111111000 001134677888889999999999999999999999999999978999999
Q ss_pred hhhhhhhheee
Q 017461 358 TLSETVQVCTT 368 (371)
Q Consensus 358 ~~~~~~~~~~~ 368 (371)
+..++....++
T Consensus 289 ~lll~g~~~~v 299 (438)
T COG2270 289 ELLLIGIALSV 299 (438)
T ss_pred HHHHHHHHHHH
Confidence 98887655543
No 214
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.03 E-value=1.4e-08 Score=94.50 Aligned_cols=141 Identities=11% Similarity=0.017 Sum_probs=105.9
Q ss_pred hhhhhhhhhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHH
Q 017461 123 MSIAILPMSAEF--NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVV 200 (371)
Q Consensus 123 ~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~ 200 (371)
....++.+.++. +.+....+...+.+..+..++.++++++.||+++|+++.++.++.++..++..+.+ +... +.+
T Consensus 251 ~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~--~~~~-~~~ 327 (410)
T TIGR00885 251 CWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG--GHVG-LYC 327 (410)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC--ChHH-HHH
Confidence 344455554443 33444455566777788899999999999999999999999999999988888877 5443 567
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc------CchhHHHHHhH
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGS 268 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~f~~~~~ 268 (371)
-++.|++.+.++|...++..+..+++.+....++.. + .+|.+++|++.|.+.|.. +.+..|++..+
T Consensus 328 l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~-~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~ 399 (410)
T TIGR00885 328 LTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVM-A-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLL 399 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHH-H-HhccchHHHHHHHHHHHhcccccCccchHHHHHHH
Confidence 788889999999999999999996554433333333 3 399999999999999954 46777776443
No 215
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.03 E-value=4.4e-08 Score=95.40 Aligned_cols=158 Identities=19% Similarity=0.237 Sum_probs=128.4
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHHHHHHHhhhhhcc------Chh
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKL------GLP 195 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~------~~~ 195 (371)
...+...+.+.+|.+.+....+...+....-+..+++|.++|+ +|+++.+.++.++..+|.++.++.... ...
T Consensus 7 ~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~ 86 (654)
T TIGR00926 7 RTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDL 86 (654)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHH
Confidence 3444556667789999999999999999999999999999996 699999999999999999888775310 123
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCc---chHHHHHHHHHHHHHHHHHHHHhHHHHhccc-------CchhHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-------GWPSVFYS 265 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-------gw~~~f~~ 265 (371)
..+++-.+..+|.|++-+...+...|.++++ +|-..+.++..+.++|..+++++.+++.+.+ +|...|.+
T Consensus 87 ~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i 166 (654)
T TIGR00926 87 LDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGV 166 (654)
T ss_pred HHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHH
Confidence 4667788888999999999999999999754 3667788889999999999999999887443 69999999
Q ss_pred HhHHHHHHHHHHhhc
Q 017461 266 FGSLGTVWFTVWLSK 280 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~ 280 (371)
.+++.++.+++.+..
T Consensus 167 ~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 167 PAILMILALIVFMAG 181 (654)
T ss_pred HHHHHHHHHHHHHHh
Confidence 888877776665543
No 216
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.00 E-value=1.9e-09 Score=100.72 Aligned_cols=159 Identities=16% Similarity=0.162 Sum_probs=128.6
Q ss_pred hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-----CCchhHHHHHHHHHHHHHHhhhhhc--cChhH
Q 017461 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-----GGKAVLGFGVVWWSIATALTPVAAK--LGLPF 196 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~~~~~~~~~~i~~~~~~~~~~--~~~~~ 196 (371)
....+.+.+++|+++.+...+.+...+.- ...++.|.++|-+ -||+-++++.++.+++.+.++..+. .+...
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~ 88 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAI 88 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhh
Confidence 45577889999999999988887776654 4577889999976 3666677888888777766666542 14666
Q ss_pred HHHHHHHHHhhhhchhhhHHHHHhcccC--CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHH
Q 017461 197 LLVVRVFMGIGEGVAMPAMNNILSKWVP--VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWF 274 (371)
Q Consensus 197 l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~ 274 (371)
..+.-++..+|......++-+++.|... ++.||...+.......+|.+++..++|.+.+..++++.|.+.+++..+..
T Consensus 89 ~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 89 AVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 7777888899999999999999999974 34478888888999999999999999999999999999999988888877
Q ss_pred HHHhhcccC
Q 017461 275 TVWLSKAHS 283 (371)
Q Consensus 275 ~~~~~~~~~ 283 (371)
+..++..+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 777776666
No 217
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.00 E-value=8.1e-09 Score=97.78 Aligned_cols=126 Identities=15% Similarity=0.165 Sum_probs=111.8
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh----------hccChhHHHHH
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA----------AKLGLPFLLVV 200 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~~~l~~~ 200 (371)
.+.+|.++.+.|++.....++.+++..+.+++.+|++.|+++.++.++.+++.+..... + +.+.++..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~--~~~~~~~~ 357 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGIS--DEVFVLGD 357 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCC--Ceeeeeeh
Confidence 35789999999999999999999999999999999999999999999999887554311 2 44456666
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
-++.+++.+........++.+..|++.+|...++.....++|..+++.+++.+.+..|
T Consensus 358 ~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 358 SIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8899999999899999999999999999999999999999999999999999998777
No 218
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.5e-08 Score=94.91 Aligned_cols=180 Identities=10% Similarity=0.078 Sum_probs=128.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC---------chhHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG---------KAVLGF 174 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr---------r~~~~~ 174 (371)
.++.+.++.+........+....|. +.+-+|.+..+.|++.++..+...+..+++|.++||.-+ |..-.+
T Consensus 259 ~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i 338 (466)
T KOG2532|consen 259 PVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTI 338 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhH
Confidence 4566777777777777778888887 566799999999999999999999999999999998855 233335
Q ss_pred HHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhh-hchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 175 GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGE-GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~-~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
+....+++.+..++.+..+.+.-+++ +..+++. |...+..+.-..+.. +++-+..+|+.+....+..+++|.+.+.+
T Consensus 339 ~~~~~ai~l~~l~~~~~~~~~~a~~~-l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~ 416 (466)
T KOG2532|consen 339 AFGGPAVFLLVLAFTSDEHRLLAVIL-LTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGII 416 (466)
T ss_pred HHHHHHHHHHeeeecCCCcchHHHHH-HHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeE
Confidence 55666666666666663222122222 2222222 222333333333434 68889999999999999999999999999
Q ss_pred hcc---cCchhHHHHHhHHHHHHHHHHhhcccCCCC
Q 017461 254 IHR---FGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 254 ~~~---~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
... -.|+++|++.+++.++..++..++-..++.
T Consensus 417 ~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~ 452 (466)
T KOG2532|consen 417 VTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPA 452 (466)
T ss_pred eCCCCHHHHHHHHHHHHHHHHHhchheeEeecCccc
Confidence 842 369999999999988887766666544333
No 219
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.96 E-value=3.6e-08 Score=91.48 Aligned_cols=128 Identities=14% Similarity=0.001 Sum_probs=96.3
Q ss_pred hhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH-HHHHHHHhhhhhccChhHHHHHHHHHHhh
Q 017461 129 PMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW-WSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (371)
Q Consensus 129 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~-~~i~~~~~~~~~~~~~~~l~~~r~l~G~~ 207 (371)
.+.+.+|.+..+.+++.....++..++.++.+++.||++++........+ ..+...........+.+.++++.++.|++
T Consensus 233 ~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 312 (394)
T PRK11652 233 LMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFG 312 (394)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 34455899999999999999999999999999999999833322222222 22222222221111567778888999999
Q ss_pred hhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc
Q 017461 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF 257 (371)
Q Consensus 208 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 257 (371)
.+...+...++..|.+| +++|.+.++......+|..+++.+++.+....
T Consensus 313 ~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~~~ 361 (394)
T PRK11652 313 AGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLPQTG 361 (394)
T ss_pred HHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHccCCc
Confidence 99999999999999985 68899999999999999999999998886653
No 220
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.94 E-value=3.5e-08 Score=94.24 Aligned_cols=139 Identities=14% Similarity=0.060 Sum_probs=105.4
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc-------cChhHHHHHHHHHHhhhh
Q 017461 141 VGLIQSSFFWGYLLTQIAG----GIWADTVGGKAVLGFGVVWWSIATALTPVAAK-------LGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~----g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~ 209 (371)
.+++.++..+...++.++. +++.+|++..+.+.+|.++.+++.+..++... .+.+++++.+++.|+|..
T Consensus 318 ~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~ 397 (500)
T PRK09584 318 PEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGEL 397 (500)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHH
Confidence 5667777776666776666 66666666668889999999999988777752 135689999999999999
Q ss_pred chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc----------ccCchhHHHHHhHHHHHHHHHHhh
Q 017461 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
+..|...+++.+..|++.||+++|++.....+|..++..+.+.... ..+..+.|...+++++++.++.+.
T Consensus 398 ~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 398 MISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999888888887777666643221 113567787777766655544443
No 221
>PRK11462 putative transporter; Provisional
Probab=98.94 E-value=7.5e-08 Score=91.11 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=93.1
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
.+....++.+...-++...+.+.+.+.++.+++.+++++++||+|+|+++..+..+.++..++..+.+..+.+.+++.-+
T Consensus 247 ~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (460)
T PRK11462 247 RGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIF 326 (460)
T ss_pred HHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHH
Confidence 33334444444332445566777888889999999999999999999988765555444444443433113334555567
Q ss_pred HHHhhhhchhhhHHHHHhcccC-------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 203 FMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+.|++.+...+...++++|..+ .++.|...+.......+|..+|+.++|.+.+..|+
T Consensus 327 l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 327 VIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7788877777766777777765 33346667777788999999999999988765555
No 222
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.94 E-value=1.1e-06 Score=82.10 Aligned_cols=240 Identities=9% Similarity=0.029 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC-----CcchHHHHHHHHHHHHHHH-HHHHHHhhhhhCCchhHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSAEFNW-----NPATVGLIQSSFFWGYLLT-QIAGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~~~~~~~~ 178 (371)
.++.+.+.+|+..+.+++ +-++.+.+.+ +.+.+.++-+...+...+. .++.+++++|++|++++-+....
T Consensus 8 k~~~~~l~fF~il~~Y~i----LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~ 83 (472)
T TIGR00769 8 KFLPLFLMFFCILFNYTI----LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISP 83 (472)
T ss_pred HHHHHHHHHHHHHHHHHH----HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHH
Confidence 444455555555554443 4445555544 3467888888777766666 89999999999999999988888
Q ss_pred HHHHHHHhhhhh----cc-------------------------ChhHHHHHHHHHHhhhhchhh-hHHHHHhcccCCcch
Q 017461 179 WSIATALTPVAA----KL-------------------------GLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPVAER 228 (371)
Q Consensus 179 ~~i~~~~~~~~~----~~-------------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~r 228 (371)
+.+..+++++.- +. +.|...+..+...+-.....+ .-..+++|.+..++-
T Consensus 84 F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qa 163 (472)
T TIGR00769 84 FLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEA 163 (472)
T ss_pred HHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 877777766651 00 134445556666666566665 778999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHhc-------c-cCch----hHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHH
Q 017461 229 SRSLALVYSGMYLGSVTGLAFSPFLIH-------R-FGWP----SVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEK 296 (371)
Q Consensus 229 ~~~~~~~~~~~~~g~~~g~~~~~~l~~-------~-~gw~----~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (371)
.+..++++.+.++|.++++.+..++.+ . ..|. ..+.+.++.++++.++... ..+....++.....++
T Consensus 164 kRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~ 242 (472)
T TIGR00769 164 KRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWW-VNRNVLTDPRSYNPAL 242 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccCCccccchhh
Confidence 999999999999999999999888763 1 1242 2333333333433333333 3222221111111110
Q ss_pred HHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Q 017461 297 KLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVS 352 (371)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (371)
..++++.+......++.++++|-++.+++...++....+.+....-..+.+.+
T Consensus 243 ---~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~ 295 (472)
T TIGR00769 243 ---KEKKVKPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY 295 (472)
T ss_pred ---ccccCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 11111112223457788899999888888888877766666654445555543
No 223
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.93 E-value=2.3e-09 Score=94.83 Aligned_cols=163 Identities=18% Similarity=0.135 Sum_probs=130.4
Q ss_pred HHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC--CchhHHHHHHHHHHHHHHhhhhhcc
Q 017461 116 CNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAKL 192 (371)
Q Consensus 116 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~ 192 (371)
.+.....+-+.++. +.|.+..+.+++|+..--..+.+.++..+.|.++||++ |-.....++++.++.+....+++
T Consensus 282 ~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~-- 359 (464)
T KOG3764|consen 282 SNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFAT-- 359 (464)
T ss_pred ccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhh--
Confidence 34444555666666 67778877779999999999999999999999999999 54445566666777777788888
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCc------chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA------ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSF 266 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~ 266 (371)
++..+++-++..|++.+...........+....+ .-|...++...++.+|.++||.++|.+.+..|++|.-.+.
T Consensus 360 ~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~ii 439 (464)
T KOG3764|consen 360 SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTII 439 (464)
T ss_pred hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHH
Confidence 9999999999999988877776666655555433 4467889999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhc
Q 017461 267 GSLGTVWFTVWLSK 280 (371)
Q Consensus 267 ~~~~~~~~~~~~~~ 280 (371)
++..++-..++..+
T Consensus 440 g~~n~iyapvl~ll 453 (464)
T KOG3764|consen 440 GILNLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888776655443
No 224
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.92 E-value=6.4e-07 Score=81.39 Aligned_cols=224 Identities=11% Similarity=0.097 Sum_probs=157.2
Q ss_pred hhhhhhhhhh-cCCCcchHH-HHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHH
Q 017461 124 SIAILPMSAE-FNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVR 201 (371)
Q Consensus 124 ~~~~~~~~~~-~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r 201 (371)
..+.|.+.+. .|++.+++. -+.-+..-.+....++...+.|.++.|++++++.+...+..++..+.+ +.+.+-+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~--sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGT--SVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHC--cHHHHHHHH
Confidence 3445666665 788888864 455566777888889999999999999999999999999999999999 999999999
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC--chhHHHHHhHHHHHHHHHHhh
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~ 279 (371)
++-|++.+. ..+.++++=...++++-.++.+....+.-+|..++.++|..+....+ ++....+......+.+++.++
T Consensus 102 ~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~f 180 (412)
T PF01770_consen 102 FFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALF 180 (412)
T ss_pred HHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999875 67788888888889999999999999999999999999998887433 445544444433344444333
Q ss_pred cccCCCCC---CCCCCh------HHHH--HHhhhc----cCCCCc-----------ccchhhhhhcChhHHHHHHHHHHH
Q 017461 280 KAHSSPAE---DPQLRP------AEKK--LIVSSC----ASKEPV-----------KTIPWGLILSKPPVWALIVSHFCH 333 (371)
Q Consensus 280 ~~~~~~~~---~~~~~~------~~~~--~~~~~~----~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~ 333 (371)
+|..++. ++.... .+.+ ....+. ++..+. ....+++..++|.++...+-+.+.
T Consensus 181 -LP~~~~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~a 259 (412)
T PF01770_consen 181 -LPMPKRSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFA 259 (412)
T ss_pred -cCCCCcccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 3433321 111000 0000 000000 000000 123455566788888888888888
Q ss_pred HHHHHHHHHhhHHHHHHh
Q 017461 334 NWGTFILLTWMPTYYNQV 351 (371)
Q Consensus 334 ~~~~~~~~~~~~~~l~~~ 351 (371)
..+++.+..|......+.
T Consensus 260 tcgy~qv~nYvQ~LW~~v 277 (412)
T PF01770_consen 260 TCGYYQVINYVQSLWDTV 277 (412)
T ss_pred HhHHHHHHHHHHHHHHhc
Confidence 888888888887777664
No 225
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.91 E-value=1e-07 Score=87.91 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=119.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh
Q 017461 109 CFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP 187 (371)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~ 187 (371)
.++..++......+.+....++.+. +|.++....+.......+.+++.+++.++.+|+|+|+++.++.++.+++.++..
T Consensus 241 ~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 241 LLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHH
Confidence 3334444555555566666665443 566666777888888888888899999999999999999999999999999998
Q ss_pred hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccC-------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 188 VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 188 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+.+..+.+.+++..++.++|.+...+...++++|..+ .+.-|...+......=+|.+++..+.|++.+..|+
T Consensus 321 f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 321 FTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred hhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 8876578889999999999999999999999887764 22347778888888888999999888888765553
No 226
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.88 E-value=8e-08 Score=85.61 Aligned_cols=164 Identities=14% Similarity=0.177 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
+....++.|+...........++.+.++ .|++..+.+...+.+..+.++|.+++-++..|+...|.+.+..++..+.++
T Consensus 238 ~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~ 317 (422)
T COG0738 238 LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLL 317 (422)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 3344555666666666777777776666 888999999999999999999999999999999999999999999998899
Q ss_pred HhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHH
Q 017461 185 LTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 185 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~ 264 (371)
..+++. +.+. +.+-++.|+..+..+|...+...+..+ +.....|..-....+|+++-|++.|++.|..|-...+.
T Consensus 318 ~~~l~~--g~v~-~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 318 AVALIG--GVVA-LYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred HHHHhc--ChHH-HHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 999998 7544 445688899999999999999999997 34445555566777889999999999999998887777
Q ss_pred HHhHHHHHHH
Q 017461 265 SFGSLGTVWF 274 (371)
Q Consensus 265 ~~~~~~~~~~ 274 (371)
+...+|.+..
T Consensus 393 ~~pllc~lyV 402 (422)
T COG0738 393 IVPLLCYLYV 402 (422)
T ss_pred HHHHHHHHHH
Confidence 5555555544
No 227
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.84 E-value=2.3e-07 Score=88.37 Aligned_cols=140 Identities=14% Similarity=0.044 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCchh-------HHHHHHHHHHHHHHhh-----hhh---ccChhHHHHHHHHHH
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-------LGFGVVWWSIATALTP-----VAA---KLGLPFLLVVRVFMG 205 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-------~~~~~~~~~i~~~~~~-----~~~---~~~~~~l~~~r~l~G 205 (371)
.+++.+...+...+..++.+++.||+|+|+. +.+|.++.+++.+..+ ++. ..+.|+++...++.|
T Consensus 311 ~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g 390 (489)
T PRK10207 311 PVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQS 390 (489)
T ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHH
Confidence 4566667777788999999999999999974 7778777777764321 221 126788889999999
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc----------ccCchhHHHHHhHHHHHHHH
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH----------RFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~gw~~~f~~~~~~~~~~~~ 275 (371)
+|.++..+....++.+..|++.++.++|++.....+|..+|..++..... .-...+.|...++..+++.+
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v 470 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAV 470 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999888865531 01245667777766666655
Q ss_pred HHhhc
Q 017461 276 VWLSK 280 (371)
Q Consensus 276 ~~~~~ 280 (371)
+++..
T Consensus 471 ~~~~~ 475 (489)
T PRK10207 471 VMALM 475 (489)
T ss_pred HHHHH
Confidence 55443
No 228
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.84 E-value=1.4e-11 Score=116.50 Aligned_cols=165 Identities=13% Similarity=0.045 Sum_probs=114.0
Q ss_pred hhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh--h--hhccC---
Q 017461 121 VNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP--V--AAKLG--- 193 (371)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--~--~~~~~--- 193 (371)
.......+.+.+..+.+.. -+......+...++.++...+.||+|||++++++.++.+++.+..+ . ..+.+
T Consensus 270 ~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (451)
T PF00083_consen 270 NFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWW 347 (451)
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3344556677777777666 2222233455556777778999999999999999999888877664 1 11100
Q ss_pred hhHHHHHHHHHHhhhh-chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 194 LPFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
-...++.-.+..++.+ +..+....+.+|.+|.+.|+++.++......++.++++.+...+.+..+-...+++.++++++
T Consensus 348 ~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 348 SILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLI 427 (451)
T ss_pred ccccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHH
Confidence 1112222222222222 344666688899999999999999999999999999998888887766634567777778888
Q ss_pred HHHHHhhcccCCCCC
Q 017461 273 WFTVWLSKAHSSPAE 287 (371)
Q Consensus 273 ~~~~~~~~~~~~~~~ 287 (371)
..+..+++.||+..+
T Consensus 428 ~~i~~~~~lpET~g~ 442 (451)
T PF00083_consen 428 AIIFVYFFLPETKGK 442 (451)
T ss_pred HHhheeEEEeeCCCC
Confidence 888888888987654
No 229
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.82 E-value=7.6e-09 Score=93.22 Aligned_cols=184 Identities=10% Similarity=-0.014 Sum_probs=132.4
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHH--------HHH-HHHHHHHHHHHHHHHhhhhhCCchhHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGL--------IQS-SFFWGYLLTQIAGGIWADTVGGKAVLGF 174 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~s-~~~~~~~~~~~~~g~l~dr~Grr~~~~~ 174 (371)
..++..+..+|+.....+..+.....+.+.+|+.+..... ... +-..++..+-++...++|++|||+..+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5677777888888788888888888888888875554433 111 1122333355677788999999999999
Q ss_pred HHHHHHHHHHHhhhhhcc--ChhHHHHHHHHHHhhhh-chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHH
Q 017461 175 GVVWWSIATALTPVAAKL--GLPFLLVVRVFMGIGEG-VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (371)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~--~~~~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (371)
|.+++++..+..++..+. +...++++..+..+... +.......+-+|.||.+.|+..-|+..+..-.|+++|...-.
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~ 463 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFL 463 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhh
Confidence 999999999999888721 12233333333333222 122333456689999999999999999999999999999999
Q ss_pred HHhc-----ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 252 FLIH-----RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 252 ~l~~-----~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
.+.+ ..|.|++|++.+.++++..+..++ .||+..+.
T Consensus 464 ~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk~~~ 504 (538)
T KOG0252|consen 464 YLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL-IPETKGKS 504 (538)
T ss_pred HhhhccCCccccchHHHHHHHHHHHHhHheeEE-eecccccC
Confidence 9988 778999999999888776665554 45655443
No 230
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.81 E-value=2.8e-08 Score=89.57 Aligned_cols=131 Identities=15% Similarity=0.115 Sum_probs=104.0
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCchhHH-HHHHHHHHHHHHhhhhhcc-----
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLG-FGVVWWSIATALTPVAAKL----- 192 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~-~~~~~~~i~~~~~~~~~~~----- 192 (371)
=....+++.++.|++....+.+.-..-+...+.+|+.|..+|| |||||.++ .+.++.+++.++..++.+.
T Consensus 51 elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 51 ELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred HhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhc
Confidence 3455778889999999999999998899999999999999995 89887766 5556677777777776511
Q ss_pred ----------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHH-HHHHHHHHHHHHHHHHHHhHHHH
Q 017461 193 ----------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSR-SLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 193 ----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
....++++..+.-++.-.....+-+++.|....+++.+ +++.+....++|+.+|..+++++
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 13345556666667766778889999999998777777 99999999999999998888743
No 231
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.81 E-value=3.2e-08 Score=90.68 Aligned_cols=119 Identities=18% Similarity=0.103 Sum_probs=89.2
Q ss_pred hhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc--ChhHHHH
Q 017461 123 MSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL--GLPFLLV 199 (371)
Q Consensus 123 ~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~l~~ 199 (371)
.....|. +.+.+|.+..+.+++.+...++..++.+++|+++||+|+|+.+..+..+.+.+.++..+.... +.+.+++
T Consensus 244 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (366)
T TIGR00886 244 VSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIV 323 (366)
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 3344444 556789999999999999999999999999999999999988888777776666655544311 3444455
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHH
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLG 242 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g 242 (371)
..++.+++.|.......+++.+.+| +++|.+.|+.....++|
T Consensus 324 ~~~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 324 LFVALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 5555566666666667778888885 79999999988877765
No 232
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.76 E-value=7.2e-07 Score=70.34 Aligned_cols=109 Identities=13% Similarity=0.172 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcc
Q 017461 143 LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (371)
Q Consensus 143 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 222 (371)
.-.++......++.++.+.+.+++|.|+.+++|.+.+.+-.... +-+ +.+.++.+-++.|++.+..|++...++.+.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 34556667778888999999999999999999999988666554 455 788999999999999999999999999999
Q ss_pred cCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 223 VPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 223 ~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
..++++++..+++......+.++|.++.-++.
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888887765553
No 233
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.76 E-value=6.1e-07 Score=80.67 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=125.0
Q ss_pred hhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh-hhCCchhHHHHHHHHHHHHHHhhhhhc-cChhHHHHHHHHHH
Q 017461 128 LPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-TVGGKAVLGFGVVWWSIATALTPVAAK-LGLPFLLVVRVFMG 205 (371)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~~~~-~~~~~l~~~r~l~G 205 (371)
|+=.+-||++..+...+......|..++-...|++.. |.++++...+|+.+.+++..+..++.. .+.+.+..+-++.|
T Consensus 233 Pygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G 312 (403)
T PF03209_consen 233 PYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLG 312 (403)
T ss_pred CchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3445679999999999999999999999999999888 678888888898888888766444321 17889999999999
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------cCchhHHHHHhHHHHHHHH
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR----------FGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~----------~gw~~~f~~~~~~~~~~~~ 275 (371)
++.|.+.....+...+...+++.|..+|.++....++..+|..++|.+.|. .+|-.+|.+.+++.++..+
T Consensus 313 ~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ 392 (403)
T PF03209_consen 313 LGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALV 392 (403)
T ss_pred HhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987662 2466777777766555554
Q ss_pred HHh
Q 017461 276 VWL 278 (371)
Q Consensus 276 ~~~ 278 (371)
+..
T Consensus 393 ll~ 395 (403)
T PF03209_consen 393 LLG 395 (403)
T ss_pred HHH
Confidence 443
No 234
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=7.5e-07 Score=85.62 Aligned_cols=181 Identities=15% Similarity=0.087 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
...+.+..+.............+.+-+..|.+... .+...+..+...++..+...+.||+|||+.++.+...+.++.++
T Consensus 297 ~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~ 375 (513)
T KOG0254|consen 297 IIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVI 375 (513)
T ss_pred HHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHH
Confidence 33444444544455555666677788888876554 55566667777788888899999999999999999999999988
Q ss_pred hhhhhcc-----------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 186 TPVAAKL-----------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 186 ~~~~~~~-----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
++..... .+..+....+.......+..+....+.+|.+|.+-|+++.++......+...+-......+.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 376 LAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765311 12222333333333334455666778899999999999999977766665544444444444
Q ss_pred cccCchhHHHHHhHHHHHHHH-HHhhcccCCCCC
Q 017461 255 HRFGWPSVFYSFGSLGTVWFT-VWLSKAHSSPAE 287 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~-~~~~~~~~~~~~ 287 (371)
+..++...|...+.++.+..+ .++++.||+...
T Consensus 456 ~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~ 489 (513)
T KOG0254|consen 456 EALGIGGTFGYFGGICLLSLIIFVFFFVPETKGL 489 (513)
T ss_pred HhccccchHHHHHHHHHHHHHHHheEEcccCCCC
Confidence 444456677777777777777 677778876554
No 235
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.73 E-value=1e-06 Score=82.38 Aligned_cols=154 Identities=9% Similarity=-0.001 Sum_probs=102.3
Q ss_pred hhhhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh----hhccChh
Q 017461 121 VNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV----AAKLGLP 195 (371)
Q Consensus 121 ~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~----~~~~~~~ 195 (371)
..+....|.+ ++.+|.+..+.++.......+..++..+.+++.++.++++.+.....+..++.++... .. .+++
T Consensus 235 ~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~-~~~~ 313 (413)
T PRK15403 235 MSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWP-HVWL 313 (413)
T ss_pred HHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHcc-ccHH
Confidence 3444556654 5557999999999988888888888888888775555544443333333333333222 12 1444
Q ss_pred HHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHH
Q 017461 196 FLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 275 (371)
.++++.++.|+|.+...+......-.. ....+|++.++.+.....+..+++.+++++.++ +-++.|...+++..+...
T Consensus 314 ~~~~~~~l~~~G~~~~~p~~~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~ 391 (413)
T PRK15403 314 WSVLGTSLYAFGIGLIFPTLFRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVIVV 391 (413)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHHHH
Confidence 567788888999888877776533221 233479999999999888899999999988775 556777766665555444
Q ss_pred HH
Q 017461 276 VW 277 (371)
Q Consensus 276 ~~ 277 (371)
..
T Consensus 392 ~~ 393 (413)
T PRK15403 392 FT 393 (413)
T ss_pred HH
Confidence 43
No 236
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.70 E-value=1e-07 Score=66.11 Aligned_cols=80 Identities=15% Similarity=0.214 Sum_probs=73.7
Q ss_pred HHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChh
Q 017461 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLP 195 (371)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~ 195 (371)
.+..++.+.+++|.++++.++|.++.|++.+.+++|+.+|.+...++.++..+++.+..+.++..+..+.+++.+ +.+
T Consensus 4 mGigRFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh--chH
Confidence 356788899999999999999999999999999999999999999999998889999999999999999999998 765
Q ss_pred HH
Q 017461 196 FL 197 (371)
Q Consensus 196 ~l 197 (371)
.+
T Consensus 82 ~w 83 (85)
T PF06779_consen 82 LW 83 (85)
T ss_pred HH
Confidence 44
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.64 E-value=1.1e-06 Score=82.58 Aligned_cols=145 Identities=14% Similarity=-0.019 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCC-chhHHHHHHHHHHHHHHhhhhhcc--C-----------------hhHHHHHH
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALTPVAAKL--G-----------------LPFLLVVR 201 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~~~--~-----------------~~~l~~~r 201 (371)
.+....+.+...+.+++.-++.+++|+ |++..++.++.+++.+...+.... | .+..++..
T Consensus 308 ~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 344556666666888888999999995 677788888888888777655410 1 37788889
Q ss_pred HHHHhhhhchhhhHHHHHhcccCC--cchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC--chhHHHHHhHHHHHHHHHH
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPV--AERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG--WPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g--w~~~f~~~~~~~~~~~~~~ 277 (371)
.+.|+..+.....-++++++..++ ++.|..+|+.+.+..+..++..+..|.+.+.+| -.+.+.+.++..++..++.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 999999999999999999999984 455999999999999999999988888666554 5677888888888888888
Q ss_pred hhcccCCCC
Q 017461 278 LSKAHSSPA 286 (371)
Q Consensus 278 ~~~~~~~~~ 286 (371)
++.+|+.+.
T Consensus 468 ~~~~~~~~~ 476 (477)
T TIGR01301 468 LILLPRPRV 476 (477)
T ss_pred HHhCCCCCC
Confidence 888877543
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.59 E-value=3.1e-06 Score=81.04 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhh-hcCCCc---chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchh-HHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILPMSA-EFNWNP---ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAV-LGFGVVWW 179 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~-~~~~~~~~ 179 (371)
.+.+.++..++.++.++....+.|.... -|+-+. ...++....+.++..+++++.|.+..+++|-|. ++++.+++
T Consensus 311 ~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ 390 (599)
T PF06609_consen 311 GFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLM 390 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHH
Confidence 3444445555565555566666666433 455443 357888888899999999999999998886554 45777677
Q ss_pred HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHH
Q 017461 180 SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (371)
Q Consensus 180 ~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (371)
.++..+++..+..|....+..-++.|+|.|.........+.-..|.++-|.+.|+....-.+|+.+|..+..
T Consensus 391 ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 391 TAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 665555544433355666778899999999988888888888889999999999999999999888876654
No 239
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.46 E-value=1.9e-05 Score=74.66 Aligned_cols=141 Identities=11% Similarity=0.033 Sum_probs=104.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCC--ch----h-HHHHHHHHHHHHHHhhhhhc-------cChhHHHHHHHHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGG--KA----V-LGFGVVWWSIATALTPVAAK-------LGLPFLLVVRVFMG 205 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr--r~----~-~~~~~~~~~i~~~~~~~~~~-------~~~~~l~~~r~l~G 205 (371)
..+|+.++..+..++.+|+.+++-.|.++ |. . +.+|+++.+++.+.+.++.. .+.+++++..++++
T Consensus 309 p~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t 388 (493)
T PRK15462 309 PTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMG 388 (493)
T ss_pred CHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHH
Confidence 36788888889888999988888777743 21 1 66788888888766654321 26788999999999
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHH-HHHHHHHHHhHHHHhcc------------cCchhHHHHHhHHHHH
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGM-YLGSVTGLAFSPFLIHR------------FGWPSVFYSFGSLGTV 272 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~~------------~gw~~~f~~~~~~~~~ 272 (371)
+|.-+..|...+++++..|++.||+++|++.... .+|..++..+++..... ..+...|...+...++
T Consensus 389 ~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~ 468 (493)
T PRK15462 389 FAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALA 468 (493)
T ss_pred HHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997643 67777777766655311 1245567777776665
Q ss_pred H-HHHHhhc
Q 017461 273 W-FTVWLSK 280 (371)
Q Consensus 273 ~-~~~~~~~ 280 (371)
+ .++.+.+
T Consensus 469 ~~~~~~~~~ 477 (493)
T PRK15462 469 CVGVVLMIW 477 (493)
T ss_pred HHHHHHHHH
Confidence 5 4444443
No 240
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.44 E-value=1.4e-06 Score=82.07 Aligned_cols=161 Identities=14% Similarity=0.138 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh----hCCchhHHHHHHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADT----VGGKAVLGFGVVWWS 180 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr----~Grr~~~~~~~~~~~ 180 (371)
++..++..++.....+.+...+|.+.++ .|.+..+.+.+.+.+.++.+++.+++|.++|| ..+|........++.
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4455566666667777788888887777 56899999999999999999999999999999 677777666665555
Q ss_pred HHH-HHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchH-HHHHHHHHHHHHHHHH-HHHhHHHHhccc
Q 017461 181 IAT-ALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERS-RSLALVYSGMYLGSVT-GLAFSPFLIHRF 257 (371)
Q Consensus 181 i~~-~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~-~~~~~~~~~~~~g~~~-g~~~~~~l~~~~ 257 (371)
+.. +...... +.......-+..+.+.+...+.....+++...+..|. ...+.+..+.+.++++ ++...+.....+
T Consensus 355 ~~g~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y 432 (495)
T KOG2533|consen 355 IIGAISLLAAA--VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRY 432 (495)
T ss_pred HHHHHHHHhhc--cchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcch
Confidence 444 4444443 3444444444444555556677777777777655443 3344444444444444 444444455567
Q ss_pred CchhHHHHHhH
Q 017461 258 GWPSVFYSFGS 268 (371)
Q Consensus 258 gw~~~f~~~~~ 268 (371)
+|...|.....
T Consensus 433 ~~~~~f~~~~~ 443 (495)
T KOG2533|consen 433 GWGAVFYMLVA 443 (495)
T ss_pred hhhhHHHHHHH
Confidence 89888844433
No 241
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.44 E-value=1.8e-06 Score=59.37 Aligned_cols=69 Identities=13% Similarity=0.174 Sum_probs=58.5
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 111 SAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
..+++.......+.+.++...++.|++..++|.+.++..+...++.+++|.++||+|+++.++.+..++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 344455555666778888888899999999999999999999999999999999999999888776654
No 242
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.42 E-value=0.00013 Score=68.74 Aligned_cols=250 Identities=9% Similarity=0.017 Sum_probs=145.9
Q ss_pred ccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhCCchhHHHH
Q 017461 97 EEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAVLGFG 175 (371)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~~~~~ 175 (371)
+-.+..+..++.+.+.+|+..+.++.+-..-..+.-.- ...+.+.++=....+ +..+...+..++++++++.+++-+.
T Consensus 17 pi~~~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~-~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~ 95 (491)
T PF03219_consen 17 PIHRSELKKFLPLALMFFFILFNYTILRDLKDTLVVTA-QGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYII 95 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEec-CChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH
Confidence 33445555666666777766666554443322211111 145566666553333 5566778899999999999998888
Q ss_pred HHHHHHHHHHhhhhh-------c----------------------cChhHHHHHHHHHHhhhhchhh-hHHHHHhcccCC
Q 017461 176 VVWWSIATALTPVAA-------K----------------------LGLPFLLVVRVFMGIGEGVAMP-AMNNILSKWVPV 225 (371)
Q Consensus 176 ~~~~~i~~~~~~~~~-------~----------------------~~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~ 225 (371)
...+.....++++.- + .+.|.+.+..++.-+-.....+ .-..+..|.++.
T Consensus 96 ~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~ 175 (491)
T PF03219_consen 96 IIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTV 175 (491)
T ss_pred HHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Confidence 777777666665531 0 0234444445555554444444 468889999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHHHhc---------ccCchhHHHHH----hHHHHHHHHHHhhcccCCCCCCCCCC
Q 017461 226 AERSRSLALVYSGMYLGSVTGLAFSPFLIH---------RFGWPSVFYSF----GSLGTVWFTVWLSKAHSSPAEDPQLR 292 (371)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~---------~~gw~~~f~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (371)
++-.+..++++.+.++|.+++..+...+.+ ...|...+... .+.+++...+ ..+..+...+++...
T Consensus 176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~-~~~~~~~vl~~~~~~ 254 (491)
T PF03219_consen 176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILL-YRYMNKNVLTDPRFY 254 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHH-HHHHHHHccCccccc
Confidence 999999999999999999999988888877 12354333222 1222222222 222222111111110
Q ss_pred hHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 017461 293 PAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQV 351 (371)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (371)
+....+++++++......++.++|+|-+..+++...++....+.+....-..+++.
T Consensus 255 ---~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~ 310 (491)
T PF03219_consen 255 ---PSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQL 310 (491)
T ss_pred ---hhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000111111222245677888899988888888887777777666555555553
No 243
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.37 E-value=3.3e-05 Score=74.51 Aligned_cols=141 Identities=13% Similarity=0.019 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccCh-hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcc
Q 017461 149 FWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGL-PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE 227 (371)
Q Consensus 149 ~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 227 (371)
......+....+.+.|++|||.....+.++..++.++.++...... +...+...+..++.+..+.....+.+|.+|...
T Consensus 360 ~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~ 439 (521)
T KOG0255|consen 360 GLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVV 439 (521)
T ss_pred HHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHH
Confidence 3355666666789999999999999999999999999999873222 235666666667777777777999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCC
Q 017461 228 RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 290 (371)
Q Consensus 228 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (371)
|..+.+.......+|.+++|.+...... ......+.+.+.++.+..++...+.||+......
T Consensus 440 r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~ 501 (521)
T KOG0255|consen 440 RNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLP 501 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCc
Confidence 9999999999999999999988866554 2223333334666666666666777887665543
No 244
>PTZ00207 hypothetical protein; Provisional
Probab=98.35 E-value=7.1e-06 Score=78.94 Aligned_cols=173 Identities=6% Similarity=-0.055 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhc-CCCc-chHHH-HHHHHHHHHHHHHHHHHHhhhhhC--------CchhHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEF-NWNP-ATVGL-IQSSFFWGYLLTQIAGGIWADTVG--------GKAVLGF 174 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~s~~~~~~~~~~~~~g~l~dr~G--------rr~~~~~ 174 (371)
++++++.+++.......+..-+.+|.+.+ |.+. .+... +.+++.++..+|.+..|.+....- .|+..+.
T Consensus 355 ~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~ 434 (591)
T PTZ00207 355 LWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALF 434 (591)
T ss_pred HHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHH
Confidence 44555555555555445555577788888 6522 32222 778888888888888888772211 1223333
Q ss_pred HHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHH-HHhHHHH
Q 017461 175 GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG-LAFSPFL 253 (371)
Q Consensus 175 ~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g-~~~~~~l 253 (371)
...++.++.+++++.- ....+.+.-++.|++.|..+++...+++|+|. |+-|+-..+......+|..+- -.+.|.+
T Consensus 435 ~~~~~~~~~lll~~~~--p~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~ 511 (591)
T PTZ00207 435 IPSVCIITMLTLFLTL--PKAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEW 511 (591)
T ss_pred HHHHHHHHHHHHHHHC--CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHH
Confidence 3333677777777765 44689999999999999999999999999998 999999999999999988776 5667777
Q ss_pred hccc----------C---chhHHHHHhHHHHHHHHHHhhcc
Q 017461 254 IHRF----------G---WPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 254 ~~~~----------g---w~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
.|.. | ++.+|++.+.++++.+++.....
T Consensus 512 Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 512 YTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred HHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 6531 2 68899999999888877765543
No 245
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.31 E-value=1.5e-05 Score=70.69 Aligned_cols=141 Identities=17% Similarity=0.125 Sum_probs=119.3
Q ss_pred HHHHHhhhhhhhhhhhhh-hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC--CchhHHHHHHHHHHHHHHhhhh
Q 017461 113 FLLCNMDRVNMSIAILPM-SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVA 189 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~ 189 (371)
.++.......+....+.+ .+.+|.++.+.|-+.+...++.++.+....+..||.. -+-.+..++.++.-..++.+.+
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~ 349 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA 349 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc
Confidence 333333333344433443 4779999999999999999999999999999999998 7888888888888888888888
Q ss_pred hccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 190 AKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 190 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
+ ....+.++-.+-.+..+...+....++....|.++||.++|+......++-++||+++|.+..
T Consensus 350 ~--~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~ 413 (451)
T KOG2615|consen 350 R--TPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFS 413 (451)
T ss_pred c--cchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEE
Confidence 8 788888999999999888888899999999999999999999999999999999999988765
No 246
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.26 E-value=1.4e-05 Score=74.92 Aligned_cols=126 Identities=17% Similarity=0.241 Sum_probs=112.0
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHH
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMG 205 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G 205 (371)
.-++...++++..+.+.+.+.......+++.+.. .+...+|-|+++.+|++.-.+..++.++++ +.|+++...++.+
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~ 342 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVA 342 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHH
Confidence 3446778999999999998888888888888777 778889999999999999999999999999 9999999988888
Q ss_pred hhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 206 IGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 206 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
+. +...+...++++.+..++++|++.++....-++..+++|.+-+.+..
T Consensus 343 ~~-~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 343 LA-GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred hh-cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 76 55789999999999999999999999999999999999988876643
No 247
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.20 E-value=0.00021 Score=65.14 Aligned_cols=135 Identities=13% Similarity=0.097 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhc
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 221 (371)
+.+.-+..+-..+..+.+.++.+|+..+.=+.++.++++++.++.++++ +.+.-+++-++.+++.|........+.+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3455555566677777888889998876667777788899999999999 9999999999999999988887777644
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCc--hhHHHHHhHHHHHHHHHHhhcccCC
Q 017461 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGW--PSVFYSFGSLGTVWFTVWLSKAHSS 284 (371)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~ 284 (371)
.+++ ..++-++.+.+.++++|+..-..+.+ .|+ |..+++...+.++..+..++.++.+
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~ 198 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSP 198 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 5643 35678888888889999887777766 665 7788888877776666666555543
No 248
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.20 E-value=0.0015 Score=60.42 Aligned_cols=242 Identities=7% Similarity=-0.013 Sum_probs=149.4
Q ss_pred cccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC---CcchHHHHHHHHHH-HHHHHHHHHHHhhhhhCCchh
Q 017461 96 WEEFPKRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNW---NPATVGLIQSSFFW-GYLLTQIAGGIWADTVGGKAV 171 (371)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~ 171 (371)
|+-.+..+..++.+.+.+++..+.++.+ -.+.+.+.+ .++.++++=+..-+ +..+..++.+++.+++.+.++
T Consensus 19 wpi~r~E~~kflpl~Ll~f~I~~ny~~l----R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~v 94 (509)
T COG3202 19 WPIRRYELKKFLPLALLFFCILFNYNLL----RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKV 94 (509)
T ss_pred eeccHHHHHHHHHHHHHHHHHHHHHHHH----HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHH
Confidence 4455556666666666666666654443 344555543 46667787777777 778889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhc------------------------------cChhHHHHHHHHHHhhhhchhh-hHHHHHh
Q 017461 172 LGFGVVWWSIATALTPVAAK------------------------------LGLPFLLVVRVFMGIGEGVAMP-AMNNILS 220 (371)
Q Consensus 172 ~~~~~~~~~i~~~~~~~~~~------------------------------~~~~~l~~~r~l~G~~~~~~~~-~~~~~i~ 220 (371)
+-+.+..+....+++++.-- .+.|..-+...+.-+-.....+ .-.....
T Consensus 95 F~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN 174 (509)
T COG3202 95 FYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888888777777766420 0225555555555555455444 5577889
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc-C---------chhHHHHHhHHHHHHHHHHhhcccCCCCCCCC
Q 017461 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF-G---------WPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQ 290 (371)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-g---------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (371)
|....++-.+..++++.+.+++..++..+..++..+. . .+..+.+.+..++++..+..+.-+.....+.-
T Consensus 175 eitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f 254 (509)
T COG3202 175 EITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLF 254 (509)
T ss_pred HhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Confidence 9999999999999999999999999998888887631 1 23333444433344333333322222211110
Q ss_pred CChHHHHHHhhhccCCCCcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhh
Q 017461 291 LRPAEKKLIVSSCASKEPVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWM 344 (371)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (371)
. .+.....+++..+-.....++.++|+|-++.+.+...+++.+.+.+....
T Consensus 255 ~---~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~w 305 (509)
T COG3202 255 Y---LRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVW 305 (509)
T ss_pred h---HHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00000000011111123456778888888888888777777666655433
No 249
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=0.00026 Score=65.60 Aligned_cols=255 Identities=12% Similarity=0.042 Sum_probs=138.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcC-CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFN-WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
.+....++...+.-++....+.+..+.. -+--..+...-+-.+..+++++..|.+.||..|.+++..+.++--++..+.
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s 85 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAAS 85 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHH
Confidence 4555666666666777777777655553 233334555556667788999999999999999998877765543333222
Q ss_pred hhh------hcc----ChhHHHHHH---HHHHhhhhch-hhhHHHHHhcc----c--CCcchHHHHHHHHHHHHHHHHHH
Q 017461 187 PVA------AKL----GLPFLLVVR---VFMGIGEGVA-MPAMNNILSKW----V--PVAERSRSLALVYSGMYLGSVTG 246 (371)
Q Consensus 187 ~~~------~~~----~~~~l~~~r---~l~G~~~~~~-~~~~~~~i~~~----~--~~~~r~~~~~~~~~~~~~g~~~g 246 (371)
+.. ... +-+....+. .+.|.-.-.. .....++--|| . +++.+.+.++...-.=.+..+++
T Consensus 86 ~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~cklla 165 (432)
T PF06963_consen 86 CALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLA 165 (432)
T ss_pred HHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 211 100 012222221 1222111111 11111222233 2 24445566666666666789999
Q ss_pred HHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcc----cCCCCCCCCCChHHHHHHhhh----ccCCC-----------
Q 017461 247 LAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA----HSSPAEDPQLRPAEKKLIVSS----CASKE----------- 307 (371)
Q Consensus 247 ~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~----------- 307 (371)
|++.|.+.+..+.+...++.++..++..++=+++. +..|.-..++..++.+..... .....
T Consensus 166 Pl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (432)
T PF06963_consen 166 PLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPL 245 (432)
T ss_pred HHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHH
Confidence 99999999988988888888888777665433322 122211111111000000000 00000
Q ss_pred CcccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 308 PVKTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 308 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
.....+|+..++.+.+.. .++..+.++...++...+..|+... |+++...|.+=.
T Consensus 246 ~~~~~~w~~Y~~q~vfla-s~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~ 300 (432)
T PF06963_consen 246 RTIIRGWRTYFRQPVFLA-SFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRG 300 (432)
T ss_pred HHHhccHHHHHhCHHHHH-HHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHH
Confidence 011345666666665554 4444444445666777788888884 999998877643
No 250
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.14 E-value=2.5e-05 Score=71.87 Aligned_cols=110 Identities=17% Similarity=0.284 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhcc-------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCc---chHHHHHHHHHHH
Q 017461 170 AVLGFGVVWWSIATALTPVAAKL-------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVA---ERSRSLALVYSGM 239 (371)
Q Consensus 170 ~~~~~~~~~~~i~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 239 (371)
++++++.+++.+|.++..++... +.+.++++.++.++|.|+.-+...++++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 57788999999999885554311 2367899999999999999999999999999865 4667788899999
Q ss_pred HHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 240 YLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 240 ~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
++|..++..+.+++.+++||.+.|++.++..++..+.++.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988877766665554
No 251
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.02 E-value=0.00014 Score=67.51 Aligned_cols=110 Identities=11% Similarity=0.109 Sum_probs=94.9
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHH
Q 017461 141 VGLI-QSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (371)
Q Consensus 141 ~~~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 219 (371)
.|.. .++-...+.++.++.+.+.|+.|.|+.++++........+.+.+. |-+.++++..+.|+|.+..|...-.++
T Consensus 51 aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~yl 127 (461)
T KOG3098|consen 51 AGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYL 127 (461)
T ss_pred ccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceeh
Confidence 3443 667778889999999999999999999999999999888887666 567889999999999999999999999
Q ss_pred hcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 220 SKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 220 ~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
+|..+++.+.+..++.......+.++|..+...+
T Consensus 128 t~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 128 TSNSTRETIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hhcCChhhHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 9999999999999998888888888876555443
No 252
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.01 E-value=0.00053 Score=61.07 Aligned_cols=243 Identities=10% Similarity=-0.020 Sum_probs=145.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhh-----hhCCchhHHH-HHHHH
Q 017461 106 VVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLGF-GVVWW 179 (371)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~-~~~~~ 179 (371)
+..+.+.+.+.+.-..... .+|.+.+.-|.|.++.+....++. --..-+++.++.| |+||||.-++ +..+.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ll 109 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLL 109 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHHH
Confidence 4444555666666666666 789988888888777765544332 1234578899999 9999987553 22333
Q ss_pred HHHHHHhhhhhc---------cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhH
Q 017461 180 SIATALTPVAAK---------LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (371)
Q Consensus 180 ~i~~~~~~~~~~---------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (371)
+..+++.+...+ .+...+....++.-+..+.-..+.-.+.-.+..+++.|.+.-....+.+.|.+++..+-
T Consensus 110 G~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 110 GLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 333333332210 13333444556666666766777777777777788888777666666666666665443
Q ss_pred HHHhc-------ccCc---------hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHhhhccCCCCcccchh
Q 017461 251 PFLIH-------RFGW---------PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIVSSCASKEPVKTIPW 314 (371)
Q Consensus 251 ~~l~~-------~~gw---------~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (371)
-.+.+ ...| ...++..+.+.++...+..++.+|++....+ |.+. .....-.-+
T Consensus 190 LaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~----e~~~-------~i~~~yk~l 258 (510)
T KOG3574|consen 190 LALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDE----ELEL-------GIHESYKLL 258 (510)
T ss_pred eEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhh----hhhc-------CHHHHHHHH
Confidence 22222 0122 2234445555566656655555544333111 0000 000001234
Q ss_pred hhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhh
Q 017461 315 GLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETV 363 (371)
Q Consensus 315 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~ 363 (371)
+++++-|....++......-.++.+-....+.-+.+ +|.+..+.+++.
T Consensus 259 ~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~ 306 (510)
T KOG3574|consen 259 RDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIA 306 (510)
T ss_pred HHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeee
Confidence 567778888888888888888888888888888888 699998887765
No 253
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.00 E-value=0.00028 Score=65.25 Aligned_cols=141 Identities=17% Similarity=0.137 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCCc-------hhHHHHHHHHHHHHHHhhhh-------h-ccChhHHHHHHHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGK-------AVLGFGVVWWSIATALTPVA-------A-KLGLPFLLVVRVFM 204 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-------~~~~~~~~~~~i~~~~~~~~-------~-~~~~~~l~~~r~l~ 204 (371)
..+|..+...+.-++.+|+..++..+.+++ .=+.+|+.+++.+.++.... . ..+.++++...+++
T Consensus 325 p~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~ 404 (498)
T COG3104 325 PPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQ 404 (498)
T ss_pred CHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHH
Confidence 457788888888889998888888886554 22446666666666665554 1 13689999999999
Q ss_pred HhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHH------HhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 205 GIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF------LIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 205 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~------l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
++|.=+..|.+.+++....|+.-.+.+++++......|..++..+.+. ..+...-...|+..+...++..++.+
T Consensus 405 s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 405 SFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888877773 22333455677777777776666555
Q ss_pred hc
Q 017461 279 SK 280 (371)
Q Consensus 279 ~~ 280 (371)
..
T Consensus 485 ~~ 486 (498)
T COG3104 485 LL 486 (498)
T ss_pred Hh
Confidence 43
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=97.95 E-value=0.00031 Score=67.64 Aligned_cols=156 Identities=14% Similarity=0.139 Sum_probs=124.1
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHHHHHHHHHHHhhhhhc----------
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGVVWWSIATALTPVAAK---------- 191 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~---------- 191 (371)
...++.++.++++.+...+.-..+.+.-...+..++++.++|-| ||-+++.++.++..+|.++..++..
T Consensus 57 ~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 57 VSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 45677788899998888888888888888888999999999975 8889999999998888655444320
Q ss_pred ----------cC---hhHHHHHHHHHHhhhhchhhhHHHHHhcccC---Cc---chHHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 192 ----------LG---LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP---VA---ERSRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 192 ----------~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
.+ ...+..+.-+..+|.|+.-+...++-+|.++ ++ .+...+.++....++|..++..+..+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 00 2356666778888999999999999999998 22 22367888899999999999998888
Q ss_pred HhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 253 LIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 253 l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
.-++.||.+.|.+..+..++..++++
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHH
Confidence 88899999999988877666655554
No 255
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.91 E-value=0.0003 Score=64.18 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=83.7
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHH--HHH---HHHHhhhhhccChhHHHHHHHHHHhhh
Q 017461 134 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVW--WSI---ATALTPVAAKLGLPFLLVVRVFMGIGE 208 (371)
Q Consensus 134 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~--~~i---~~~~~~~~~~~~~~~l~~~r~l~G~~~ 208 (371)
+.-..+++.+....|.+|-.++.--...+ |+ |++.+...+- ..+ ...+.-+.+ +.|.+++.-+..|+..
T Consensus 276 ~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fip--si~ivf~lif~eGLlG 349 (402)
T PF02487_consen 276 FFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIP--SIWIVFVLIFYEGLLG 349 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHhh
Confidence 44346778888888888877775433222 33 3333333222 222 222333456 7899999999999999
Q ss_pred hchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh
Q 017461 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI 254 (371)
Q Consensus 209 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 254 (371)
|..++-....+.|-.++++|..++|....+-++|.+++.+++-.+-
T Consensus 350 Ga~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 350 GASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred hHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988886654
No 256
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.00012 Score=61.93 Aligned_cols=132 Identities=16% Similarity=0.196 Sum_probs=92.0
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRV 202 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~ 202 (371)
-++..-.+-+.||....++|.+........++...+.|-++|+-|||+.-+.-++.+.++++. -.++ .|-.++++|+
T Consensus 56 QgPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSp--qYkVLmVGR~ 132 (454)
T KOG4332|consen 56 QGPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSP--QYKVLMVGRV 132 (454)
T ss_pred cCceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCC--ceEEEeehhh
Confidence 355555677888999999998888888888899999999999999999766555544443332 2345 7889999999
Q ss_pred HHHhhhhchhhhHHHH-HhcccCCcchHHHHHHH--------HHHHHHHHHHHHHhHHHHhcccCc
Q 017461 203 FMGIGEGVAMPAMNNI-LSKWVPVAERSRSLALV--------YSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~~~~--------~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
+-|+..+..+.+.-++ ++|.- ++|+.-.-+. ..+.++-.+++.+.+..+.+.++.
T Consensus 133 LGGiaTsLLFSaFEsWliaEHn--ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~sl 196 (454)
T KOG4332|consen 133 LGGIATSLLFSAFESWLIAEHN--EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSL 196 (454)
T ss_pred hhhHHHHHHHHHHHHHHHHHhh--hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhcc
Confidence 9999999988887664 56664 3343222221 233444455666666667776543
No 257
>PRK03612 spermidine synthase; Provisional
Probab=97.81 E-value=0.0027 Score=60.92 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=86.8
Q ss_pred hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHH---HHHHHhhhhhc--cC-hhHHHHHHHH
Q 017461 130 MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWS---IATALTPVAAK--LG-LPFLLVVRVF 203 (371)
Q Consensus 130 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~---i~~~~~~~~~~--~~-~~~l~~~r~l 203 (371)
+.--+|-+....+.+.+++.+|.++|+.+++++.++.-++.. .+-..+.. ++..+...... .. ...++...++
T Consensus 41 l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~-~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 119 (521)
T PRK03612 41 ASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV-AVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLL 119 (521)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445678788888999999999999999999988744322222 11111111 11111111110 01 1223334566
Q ss_pred HHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHh-cccCchhHHHHHhHHHHHHHH
Q 017461 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLI-HRFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~-~~~gw~~~f~~~~~~~~~~~~ 275 (371)
.|+..|...|....+..+.. .++-+...|-......+|.++|.++.+++. ..+|-....++.+.+.+++.+
T Consensus 120 ~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 120 IGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 77777877777777665543 233567788889999999999999988754 456754444455555544443
No 258
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.69 E-value=0.00011 Score=66.83 Aligned_cols=172 Identities=10% Similarity=-0.065 Sum_probs=113.4
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC-chhHHHHHHHHHHHHHHh-hhhh
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG-KAVLGFGVVWWSIATALT-PVAA 190 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~-~~~~ 190 (371)
+.......+.+...+......-|.+....|++.....++.++++.+.|.+.||... |.++++......++.... .+..
T Consensus 275 ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~ 354 (480)
T KOG2563|consen 275 YGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL 354 (480)
T ss_pred HhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333334445555554455556677889999999999999999999999999864 455555555555553222 2221
Q ss_pred c-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC---chh-HHHH
Q 017461 191 K-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG---WPS-VFYS 265 (371)
Q Consensus 191 ~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g---w~~-~f~~ 265 (371)
. ...+.++..-.+.|++..+..|...-+-.|..-|..-+.-.|+......+-+.+-.++.+.+.+..+ |.+ .-+.
T Consensus 355 ~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~ 434 (480)
T KOG2563|consen 355 FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIF 434 (480)
T ss_pred cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhH
Confidence 1 1345666667888888888889888888888767777778888888877777777788888877665 333 3333
Q ss_pred HhHHHHHHHHHHhhcccCC
Q 017461 266 FGSLGTVWFTVWLSKAHSS 284 (371)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~ 284 (371)
.....++.+++..++.++-
T Consensus 435 ~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 435 LTVSALLGAILVAFFRPDY 453 (480)
T ss_pred hHHHHHHHHHHHhhhhhhH
Confidence 3334444444555544443
No 259
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.23 E-value=0.003 Score=59.33 Aligned_cols=123 Identities=15% Similarity=0.133 Sum_probs=97.5
Q ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh-hcc-------ChhHHHHHHHHHHhh
Q 017461 136 WNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA-AKL-------GLPFLLVVRVFMGIG 207 (371)
Q Consensus 136 ~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~-------~~~~l~~~r~l~G~~ 207 (371)
.++...|.+..+..++..++..+..+..-+..-|+++....++.++..+.-... ... +.+..+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 788888999988889999999999888888888888888887777665542211 100 223444456677777
Q ss_pred hhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 208 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
.+..+.....+++|..|+..-|...++.....++|..++..++..+.+.+|
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 777778888899999999999999999999999999999999999987655
No 260
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.18 E-value=0.01 Score=55.61 Aligned_cols=112 Identities=13% Similarity=0.038 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCc-hhHHHHHHH---HHHHHHHhhhhh-------ccChhHHHHHHHHHHhhhh
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGK-AVLGFGVVW---WSIATALTPVAA-------KLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr-~~~~~~~~~---~~i~~~~~~~~~-------~~~~~~l~~~r~l~G~~~~ 209 (371)
.-....++.++-.+|..+..+.. .-++| +.+.+..+. +....++|..-+ -.+-+..++..++.|+..|
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnG 387 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNG 387 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhh
Confidence 34556677777777777554321 11223 133333332 222233332220 0155677788999999999
Q ss_pred chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
-....+..+..+..++++|..+-.+...+..+|..+|..++-.+
T Consensus 388 y~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 388 YLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888776433
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.11 E-value=0.0012 Score=61.58 Aligned_cols=180 Identities=13% Similarity=0.150 Sum_probs=113.3
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHH----HHHHHHHHHHHHHHHhh-hhhCCchh
Q 017461 98 EFPKRWFIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQS----SFFWGYLLTQIAGGIWA-DTVGGKAV 171 (371)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s----~~~~~~~~~~~~~g~l~-dr~Grr~~ 171 (371)
..+..|...+.+.+..+...+....+....+. ....++++.++.-+..+ +..+......+..+... -++..|..
T Consensus 256 ~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~ 335 (488)
T KOG2325|consen 256 KPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRI 335 (488)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhcccee
Confidence 34456667777777777777666665554444 44557777666544443 33333333333333222 33345666
Q ss_pred HHHHHHHHHHHHHHhhhhh-----------------------------ccChhHHHHH-HHHHHhhhhchhhhHHHHHhc
Q 017461 172 LGFGVVWWSIATALTPVAA-----------------------------KLGLPFLLVV-RVFMGIGEGVAMPAMNNILSK 221 (371)
Q Consensus 172 ~~~~~~~~~i~~~~~~~~~-----------------------------~~~~~~l~~~-r~l~G~~~~~~~~~~~~~i~~ 221 (371)
+..+.++......+..... ..+.+.++++ -++.|++.-.+.....++-+|
T Consensus 336 ~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySk 415 (488)
T KOG2325|consen 336 ILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSK 415 (488)
T ss_pred eeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHH
Confidence 6655444433333221110 0023344444 456677777777788899999
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
...+++++.+.++++....++..+||++........|.|+++.+.+...++...++
T Consensus 416 iLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 416 ILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred HhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998999888877666555444433
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.10 E-value=0.042 Score=51.39 Aligned_cols=110 Identities=15% Similarity=0.232 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhh---hhCCchhHHHHHHHHHHHHHHhhhhhc----------------cChhHHHHHHH
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWAD---TVGGKAVLGFGVVWWSIATALTPVAAK----------------LGLPFLLVVRV 202 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~d---r~Grr~~~~~~~~~~~i~~~~~~~~~~----------------~~~~~l~~~r~ 202 (371)
+...-...+|..+++.+.+.+.+ ++|+++.+.++..+..++.++.-.... .++...++..+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33344445566666666666664 579999999999998888877654321 13667788899
Q ss_pred HHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 203 FMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 203 l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
+.|++-++.....+.+++..+ +++|..+.++...-..++..++-+....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999999999999 7888889888887777777776555443
No 263
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.09 E-value=0.0076 Score=56.08 Aligned_cols=131 Identities=16% Similarity=0.075 Sum_probs=97.6
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhh---hhhc-----cCh
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTP---VAAK-----LGL 194 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~~~-----~~~ 194 (371)
++..+..+...-|+++..+|.+-+...+....+.+...++.+|+|..+.-+++...-.+...++. +.+. .+.
T Consensus 277 f~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 277 FGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred CcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 44555555555599999999999999999999999999999999988887777654333222221 2221 134
Q ss_pred hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 195 PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 195 ~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
..++.+-++.=+|.=+...+..-++.|..|+++||...|.-....++--++-..++-.+
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 45555566666777777888899999999999999999999988888877776655433
No 264
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=96.96 E-value=0.0054 Score=60.57 Aligned_cols=150 Identities=13% Similarity=0.156 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhC--CchhHHHHHHHHHHH
Q 017461 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIA 182 (371)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~ 182 (371)
....+..++.......+...+|. +++.+|++..+.+++.....+ +.+++.+++|+++||++ .|+.+.+++++..++
T Consensus 333 ~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~ 412 (633)
T TIGR00805 333 MLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLS 412 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHH
Confidence 33444444444455555566776 455799999999999988776 67899999999999998 446666666666665
Q ss_pred HHHhhh------------------------------h-------hc----------------------------------
Q 017461 183 TALTPV------------------------------A-------AK---------------------------------- 191 (371)
Q Consensus 183 ~~~~~~------------------------------~-------~~---------------------------------- 191 (371)
.+++.. + ..
T Consensus 413 ~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~ 492 (633)
T TIGR00805 413 YLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYT 492 (633)
T ss_pred HHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceec
Confidence 443210 0 00
Q ss_pred ----------------c------C-hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHH-HHHHHHH
Q 017461 192 ----------------L------G-LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMY-LGSVTGL 247 (371)
Q Consensus 192 ----------------~------~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~ 247 (371)
. + +..+++.-++..+..+........++-...|+++|..++|+...... +|.+-+|
T Consensus 493 ~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~p 572 (633)
T TIGR00805 493 NCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAP 572 (633)
T ss_pred ccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChh
Confidence 0 0 22233334444444444445555566778889999999999765554 6778888
Q ss_pred HhHHHHhcc
Q 017461 248 AFSPFLIHR 256 (371)
Q Consensus 248 ~~~~~l~~~ 256 (371)
++-|.++|.
T Consensus 573 i~fG~~iD~ 581 (633)
T TIGR00805 573 ILFGLLIDV 581 (633)
T ss_pred HHHhhhhhc
Confidence 888888874
No 265
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=96.96 E-value=0.0079 Score=53.22 Aligned_cols=213 Identities=11% Similarity=0.039 Sum_probs=132.8
Q ss_pred hcCCCcchHH-HHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhch
Q 017461 133 EFNWNPATVG-LIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (371)
Q Consensus 133 ~~~~~~~~~~-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 211 (371)
+.+++..++. -+.-+..-.+.+.-.+.=.+.|..-.|+++++-.+...+..++.-+.+ +.+.+=+.-++-|...+.
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAa- 111 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAA- 111 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHH-
Confidence 4455554432 222233444556666667789999999999988888888888888998 999999999999988664
Q ss_pred hhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHH--HHHhHHHHHHHHHHhhcccCCCCCCC
Q 017461 212 MPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVF--YSFGSLGTVWFTVWLSKAHSSPAEDP 289 (371)
Q Consensus 212 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f--~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
..+-++++=+..+++++.++.|....+.-.|...|..++..+.+...+.... .+......+..++. .++|..++..-
T Consensus 112 EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A-~fLP~v~rSl~ 190 (433)
T KOG3810|consen 112 EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLA-LFLPRVKRSLY 190 (433)
T ss_pred HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHH-hhCCCCchhhh
Confidence 5778888888899999999999999999999999999999988754443322 22222222222333 33444332110
Q ss_pred CCChHHHHHHhhhccCC--CCc-----------ccchhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 017461 290 QLRPAEKKLIVSSCASK--EPV-----------KTIPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQ 350 (371)
Q Consensus 290 ~~~~~~~~~~~~~~~~~--~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (371)
.....+ +....+.++. +.. -..++.+..++|.+..-.+-+.+..++++-...|.-..-.+
T Consensus 191 f~~~~~-~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~ 263 (433)
T KOG3810|consen 191 FHRLED-KISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKE 263 (433)
T ss_pred hhcccc-cceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHh
Confidence 000000 0000000000 000 01234455677887777777777777777776666555444
No 266
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.93 E-value=0.0034 Score=57.66 Aligned_cols=133 Identities=15% Similarity=0.095 Sum_probs=80.5
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC----C---chhHHHHHH----HHHHHHHHhhhhhccChh
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG----G---KAVLGFGVV----WWSIATALTPVAAKLGLP 195 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G----r---r~~~~~~~~----~~~i~~~~~~~~~~~~~~ 195 (371)
.+...+-.|.+..+.-++..++..+..+|.+++|.++||+- + .+.-.+... +.+...++...... +..
T Consensus 271 ~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~-~s~ 349 (493)
T KOG1330|consen 271 IYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTS-SSM 349 (493)
T ss_pred HHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhh-HHH
Confidence 33344444556666677788888999999999999999942 2 222222221 11221222222221 223
Q ss_pred HHHHHHHHHHhhhhc-hhhhHHHHHhcccCCcchHHHHHHHHHHHH-HHHHHHHHhHHHHhcc-cCch
Q 017461 196 FLLVVRVFMGIGEGV-AMPAMNNILSKWVPVAERSRSLALVYSGMY-LGSVTGLAFSPFLIHR-FGWP 260 (371)
Q Consensus 196 ~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~-~g~~~g~~~~~~l~~~-~gw~ 260 (371)
.+.+..++.|..... .+.....+..|..|+++|..+.++...... .|-+-+|.+.|.+.++ .||+
T Consensus 350 ~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 350 IFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 334444555544333 455566778999999999999999765554 4556667688888885 4676
No 267
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=96.53 E-value=0.0017 Score=60.64 Aligned_cols=78 Identities=18% Similarity=0.109 Sum_probs=62.5
Q ss_pred HHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHH-HHHHHHHHHHHHhhhhh
Q 017461 113 FLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLG-FGVVWWSIATALTPVAA 190 (371)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~~ 190 (371)
++..+.....+.++++.+-+.+|+++.+.|.+...--+..+++.|++|.++|||-+|+.++ .+.+....+.++..+.+
T Consensus 20 ~~~~~~~~g~l~pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv~ 98 (618)
T KOG3762|consen 20 YLFFGARFGSLFPLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFVP 98 (618)
T ss_pred eeeeeecccccchHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeecc
Confidence 3444455566778888899999999999999999999999999999999999998665555 55566666667766664
No 268
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.47 E-value=0.14 Score=47.93 Aligned_cols=254 Identities=11% Similarity=-0.005 Sum_probs=124.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhh--cCCCcchHHHHHHHHHHHHHHHHHHHHHhhh-----hhCCchhHHHHH-HHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAE--FNWNPATVGLIQSSFFWGYLLTQIAGGIWAD-----TVGGKAVLGFGV-VWW 179 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~~~~~~-~~~ 179 (371)
++.+.+++.+.-.......+|.+.++ -+.+.++.+.+.-+.. -+ -.-+++.++.| |+||||.-++-. .+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~-Pf-SlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASY-PF-SLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeec-hh-HHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 34455666665555444557887777 6777777665432111 00 12355666666 799998766533 223
Q ss_pred HHHHHHhhhhh---------------cc-------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHH
Q 017461 180 SIATALTPVAA---------------KL-------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYS 237 (371)
Q Consensus 180 ~i~~~~~~~~~---------------~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 237 (371)
++..+..+..- +. +...+....++.=+-.+.-..++-.+.-.+..+++++.+.-....
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 33222222111 00 111222333233333343344444455556667787766666555
Q ss_pred HHHHHHHHHHHhHHHHhcc-------------cCc---hhHHHHHhHHHHHHHHHHhhcccCCCCCCCCC--Ch---HHH
Q 017461 238 GMYLGSVTGLAFSPFLIHR-------------FGW---PSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQL--RP---AEK 296 (371)
Q Consensus 238 ~~~~g~~~g~~~~~~l~~~-------------~gw---~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~ 296 (371)
+.++|..++..+--.+.+. .|+ ..-..+.+.+.++..+++.++.+|.+..+... .. .+.
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~ 241 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDG 241 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccc
Confidence 5566655554443333220 121 11222334444555556666666655322100 00 000
Q ss_pred H--HHhhhccCCC---Cccc-------chhhhhhcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhh
Q 017461 297 K--LIVSSCASKE---PVKT-------IPWGLILSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQ 364 (371)
Q Consensus 297 ~--~~~~~~~~~~---~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~ 364 (371)
+ ....+..+.+ .... ..+.+++|-|.+..+++..+..-.++.+-..-...=+.+ .|++....+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~l 320 (544)
T PF13000_consen 242 KSKEISIEYDESDVISTEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVL 320 (544)
T ss_pred cccccceecccccccchhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHH
Confidence 0 0000000000 0001 123346677888888888888777777666666666667 5998888777653
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.34 E-value=0.00094 Score=64.25 Aligned_cols=153 Identities=14% Similarity=0.131 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhC--CchhHHHHHHHH
Q 017461 104 FIVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVVWW 179 (371)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~ 179 (371)
..+....++..........+.++.|- ++.+|++++++.+++..+..+ +.++|.+++|.+..|+. .|..+....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 34555555566666666667777776 667899999999988876555 77789999999999984 444444444444
Q ss_pred HHHHHH---hhhh--h-----------------------------------------------ccChhHHHHHHHHHHhh
Q 017461 180 SIATAL---TPVA--A-----------------------------------------------KLGLPFLLVVRVFMGIG 207 (371)
Q Consensus 180 ~i~~~~---~~~~--~-----------------------------------------------~~~~~~l~~~r~l~G~~ 207 (371)
.++.++ ..+. + ...+..+++..++.-+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 333332 1000 0 00234455555555555
Q ss_pred hhchhhhHHHHHhcccCCcchHHHHHHHHHHH-HHHHHHHHHhHHHHhcc
Q 017461 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGM-YLGSVTGLAFSPFLIHR 256 (371)
Q Consensus 208 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~-~~g~~~g~~~~~~l~~~ 256 (371)
.+........++-...++++|..++|+..... .+|.+-||++-|.+.|.
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp --------------------------------------------------
T ss_pred HHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 55555666667778889999999999976554 46889999999998884
No 270
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.01 E-value=0.069 Score=47.05 Aligned_cols=71 Identities=11% Similarity=0.134 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhccc
Q 017461 150 WGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 223 (371)
Q Consensus 150 ~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 223 (371)
+.-+...++.+.+..++|.|+++.++...+......- +-+ .+..++-...+.|+|.+..+..--+++++..
T Consensus 69 ~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccccccccCcceecHHH
Confidence 3444555666689999999999999888776644332 333 5788889999999999998887766665554
No 271
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.32 E-value=2.4 Score=40.19 Aligned_cols=72 Identities=18% Similarity=0.133 Sum_probs=54.2
Q ss_pred HHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
-++.|+........--..+.+.+| +++|...+|-++...++..++..++++.+.+.+||+....+.-++.++
T Consensus 273 vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 273 VIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 344555556666666677788886 457888899998888888877777779999999999877776665555
No 272
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=95.00 E-value=0.0079 Score=53.79 Aligned_cols=106 Identities=12% Similarity=0.056 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhh-CCchhHHHHH--HHHHHHHHHhhh----------hhccChhHHHHHHHHHHhhhhc
Q 017461 144 IQSSFFWGYLLTQIAGGIWADTV-GGKAVLGFGV--VWWSIATALTPV----------AAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 144 ~~s~~~~~~~~~~~~~g~l~dr~-Grr~~~~~~~--~~~~i~~~~~~~----------~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
...+|.++-.+|..+.++..-+- .+|++.+.+. +++.-..++|.. .+ |-+..++..++.|+..|-
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~--~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFN--SDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCccc--chHHHHHHHHHHHHccch
Confidence 45578888888888777643211 3444443221 222222233311 22 456778889999999999
Q ss_pred hhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHH
Q 017461 211 AMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSP 251 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~ 251 (371)
..+....+..+..++++|..+-.+...+..+|..+|..++-
T Consensus 265 l~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 265 LSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp --HHHH-----------------------------------
T ss_pred hhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888888888888888877653
No 273
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.78 E-value=0.38 Score=47.58 Aligned_cols=151 Identities=13% Similarity=0.119 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHH-HHHHHHHHHHHhhhhhC--CchhHHHHHHHHH
Q 017461 105 IVVLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFW-GYLLTQIAGGIWADTVG--GKAVLGFGVVWWS 180 (371)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~-~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~ 180 (371)
++....++..+.......+.+++|- +.+.||++.+.+..+.....+ +.++|.+++|.+..||- .|....+.++...
T Consensus 393 if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 393 IFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 4555666666666666667777887 566799999999988865554 56688889999999874 4444444444443
Q ss_pred HHHHH---hhhhh-------------------------------------------------------------------
Q 017461 181 IATAL---TPVAA------------------------------------------------------------------- 190 (371)
Q Consensus 181 i~~~~---~~~~~------------------------------------------------------------------- 190 (371)
+..+. ..+..
T Consensus 473 l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~ 552 (735)
T KOG3626|consen 473 LSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSD 552 (735)
T ss_pred HHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCC
Confidence 33333 11110
Q ss_pred -----------c----c---------------ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHH-
Q 017461 191 -----------K----L---------------GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGM- 239 (371)
Q Consensus 191 -----------~----~---------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~- 239 (371)
. . .+..+++..++.-+..+...+..+.++-...++++|..++|+..+..
T Consensus 553 ~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~ir 632 (735)
T KOG3626|consen 553 GNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIR 632 (735)
T ss_pred CceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHH
Confidence 0 0 12334444444444444455666777788899999999999976665
Q ss_pred HHHHHHHHHhHHHHhc
Q 017461 240 YLGSVTGLAFSPFLIH 255 (371)
Q Consensus 240 ~~g~~~g~~~~~~l~~ 255 (371)
.+|.+-+|++-|+++|
T Consensus 633 llg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 633 LLGFIPSPIIFGAVID 648 (735)
T ss_pred HHhcCCchHhhhhhHh
Confidence 4788889999999987
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.60 E-value=0.76 Score=43.23 Aligned_cols=51 Identities=16% Similarity=0.090 Sum_probs=32.6
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 248 (371)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++++++.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~ 155 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSL 155 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHH
Confidence 3667777788889998888777777766 55543 334444555555554443
No 275
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=94.58 E-value=1.3 Score=40.74 Aligned_cols=111 Identities=11% Similarity=0.006 Sum_probs=57.5
Q ss_pred HHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHH---HHhhhhh--
Q 017461 116 CNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT---ALTPVAA-- 190 (371)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~---~~~~~~~-- 190 (371)
..+....+....+++.+++-.... ...+...+.+.+.+..++...+--+...|.-..++..+..+.. +.+.++.
T Consensus 30 ~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~ 108 (406)
T KOG1479|consen 30 TLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVK 108 (406)
T ss_pred cccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334555666677777777653333 4444455555555555555555555443333333332222222 2222221
Q ss_pred -----ccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcch
Q 017461 191 -----KLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAER 228 (371)
Q Consensus 191 -----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 228 (371)
...++..++.-++.|++.|......+...++ +|++.-
T Consensus 109 ~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~yt 150 (406)
T KOG1479|consen 109 TDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYT 150 (406)
T ss_pred cCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHH
Confidence 1146667777788888877766666666554 444443
No 276
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.33 E-value=0.33 Score=42.60 Aligned_cols=141 Identities=15% Similarity=0.111 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHh
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILS 220 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 220 (371)
.|.+.-+-.+-..+..+.+..+.||+---.=+.+..++.+.+.++.++++ +.++-+.+-.+..++.|.....-.++-+
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~--s~~~sL~GV~~aSissGlGEiTFL~lss 141 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSN--SVPMSLLGVVFASISSGLGEITFLALSS 141 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEecc--chhHHHhhhhhhhhcCCcceeehhhhhc
Confidence 34444455556666677777788887544445666778888889999999 8999999999999998876665555443
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcc--cCchhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHR--FGWPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
. +++ ...+-++.+.+.++.+|..--.++.+. ..-|...++...+.++.+...++.+++++...
T Consensus 142 ~-Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~pes~~ 206 (409)
T KOG3880|consen 142 R-YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSPESVY 206 (409)
T ss_pred c-CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCCcccc
Confidence 3 322 234556666666667776655566653 34688888888888777777777666655443
No 277
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=94.28 E-value=0.41 Score=44.15 Aligned_cols=98 Identities=7% Similarity=-0.061 Sum_probs=73.0
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHH--HHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhH
Q 017461 138 PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGV--VWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAM 215 (371)
Q Consensus 138 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~--~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 215 (371)
..--|.+-++..+..+++.+..|.+..++.+..-+.++. ++.+...+++++.+ |.|...++.++.+.......+.+
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~--~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTG--NIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 334588888888999999999999977777654444433 44455556667777 99999999999888888888887
Q ss_pred HHHHhcccCCcchHHHHHHHHH
Q 017461 216 NNILSKWVPVAERSRSLALVYS 237 (371)
Q Consensus 216 ~~~i~~~~~~~~r~~~~~~~~~ 237 (371)
..-++.....+.-|..+|+...
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf 383 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTF 383 (412)
T ss_pred HHHHHHhccccceeeeeeeHHH
Confidence 7777777766666766666543
No 278
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.49 E-value=0.23 Score=45.93 Aligned_cols=132 Identities=14% Similarity=-0.021 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhc
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 221 (371)
.|=..++.+...+.+...-++.+|+|-|+.+..+...+.++..+.++.. +.+.....+-..|+-.+....+-+..+++
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~ 412 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALAL 412 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHH
Confidence 3555677788889999999999999988888888877888888888887 77777788888885444444433333332
Q ss_pred ccC-----------------------CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-chhHHHHHhHHHHHHHH
Q 017461 222 WVP-----------------------VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-WPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 222 ~~~-----------------------~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-w~~~f~~~~~~~~~~~~ 275 (371)
+.- ...+|...|+.+....+..++.....|.+.+..| -+.+-.+.+++.+++..
T Consensus 413 y~~~g~~~a~t~~~pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~ 490 (498)
T KOG0637|consen 413 YAILGIPLAITFSIPFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGG 490 (498)
T ss_pred HHHhCCccccccccccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHH
Confidence 221 1123666777788888888887777777777655 34444444444444433
No 279
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.98 E-value=0.015 Score=49.29 Aligned_cols=65 Identities=11% Similarity=0.101 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHh---------hhhhCCchhH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIW---------ADTVGGKAVL 172 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l---------~dr~Grr~~~ 172 (371)
...++.+.+....+++-..+-.+.++.|+++.....++-+..+.-++..++.|.. .||+|||+..
T Consensus 21 ~yGvGHmlNDitAScWFTYlllfltqiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~w 94 (412)
T KOG4830|consen 21 AYGVGHMLNDITASCWFTYLLLFLTQIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSW 94 (412)
T ss_pred eechhHHHhhHHHHHHHHHHHHHHHHhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeee
Confidence 4455666666666666666666777888888888888888888888888888755 5689998754
No 280
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=92.93 E-value=1.2 Score=42.04 Aligned_cols=97 Identities=8% Similarity=-0.120 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHH--HHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHH
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGF--GVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI 218 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~--~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 218 (371)
-|.+-++..+..+++.+..|++-.++.+---+.+ ..++.+...++++..+ |.|..+++.++.+.......+.+..-
T Consensus 300 NG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~--~Iw~~Y~~yvlf~~~y~flitia~~~ 377 (511)
T TIGR00806 300 NGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSH--DIWVLYVTYVLFRGIYQFLVPIATFQ 377 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhccc--chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677777888899999999777654323333 3344444456666677 99999999999999999999999888
Q ss_pred HhcccCCcchHHHHHHHHHHH
Q 017461 219 LSKWVPVAERSRSLALVYSGM 239 (371)
Q Consensus 219 i~~~~~~~~r~~~~~~~~~~~ 239 (371)
++.....+.-|..+|+.....
T Consensus 378 iA~~L~~~~~aLvFGiNtfvA 398 (511)
T TIGR00806 378 IASSLSKELCALVFGINTFVA 398 (511)
T ss_pred HHHHhcccceEEEEecHHHHH
Confidence 888887766687777765443
No 281
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=92.82 E-value=9.3 Score=36.57 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=51.5
Q ss_pred HHHHHhhhhchhhhHHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
-+..|+........--..+.+.+| ++++...+|-++...++-..+-.++++.+.+..||+....+.-++.++.
T Consensus 289 vi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 289 VIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 344555555556666667778887 4456777888877777777777788899999999998877655444443
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.17 E-value=0.73 Score=42.29 Aligned_cols=109 Identities=14% Similarity=0.049 Sum_probs=74.2
Q ss_pred cchHHHHHHH-HHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhh---------hhccChhHHHHHHHHHHhh
Q 017461 138 PATVGLIQSS-FFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPV---------AAKLGLPFLLVVRVFMGIG 207 (371)
Q Consensus 138 ~~~~~~~~s~-~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---------~~~~~~~~l~~~r~l~G~~ 207 (371)
..-.-++..+ +.+.-.+|.+...++-+.= ||.. .+..++=.+..-++.+ -. +-+++++...+.|+.
T Consensus 281 ~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~l-~i~v~lR~lfiPlF~~cn~~~~~v~~~--~~~~~~~l~~~lgls 356 (406)
T KOG1479|consen 281 DWYALLLVFLSFNVFDLIGSILAALLTWPD-PRKL-TIPVLLRLLFIPLFLLCNYPPLPVVFE--SDGWFIFLMSLLGLS 356 (406)
T ss_pred hhhHHHHHHHHhHHHHHhhhhhhhcccCCC-Ccee-hHHHHHHHHHHHHHHHhccCCCCceec--CchHHHHHHHHHHhc
Confidence 3344455556 7888888877766665553 3333 3333333332222222 23 567888999999999
Q ss_pred hhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhH
Q 017461 208 EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (371)
Q Consensus 208 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (371)
.|=..++...+..+..+++++-.+-.+.......|...|..++
T Consensus 357 nGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 357 NGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred cchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 9988888899999999988888887777777778877777655
No 283
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.23 E-value=3.7 Score=37.01 Aligned_cols=135 Identities=10% Similarity=-0.010 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhc
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSK 221 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 221 (371)
|..-.+..+..+++.+..|.+--.+.|..-++++..-...+.+++.++...+.|...++.++.+.-.....+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 45556667788899999999988887775555444444444444434433389999999999988888888888888888
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC-----------chhHHHHHhHHHHHHHHHHhh
Q 017461 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG-----------WPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g-----------w~~~f~~~~~~~~~~~~~~~~ 279 (371)
....+.-|..+|+...... ++-.++.-.+.|.-| +..-|.+.+++.++.+.+.+.
T Consensus 354 nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYL 419 (433)
T ss_pred hhhhhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHH
Confidence 8877777777777543322 222222223333211 233466666666655454443
No 284
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=90.50 E-value=0.6 Score=40.02 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=57.5
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhHHHH---hc--ccCchhHHHHHhHHHHHHHHHHhhcccCCCCCCCCCChHHHHHHh
Q 017461 226 AERSRSLALVYSGMYLGSVTGLAFSPFL---IH--RFGWPSVFYSFGSLGTVWFTVWLSKAHSSPAEDPQLRPAEKKLIV 300 (371)
Q Consensus 226 ~~r~~~~~~~~~~~~~g~~~g~~~~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (371)
++|+....+...+.++|.++....--+. .+ ...|++++.+.+++.++.+++..++-.+-....++. ++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~-k~------ 74 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKE-KQ------ 74 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccc-cc------
Confidence 5666666677777888877664332111 11 235999999988887777776665533321111110 00
Q ss_pred hhccCCCCcccchhhhhhcChhHHHHHHHHHHHH
Q 017461 301 SSCASKEPVKTIPWGLILSKPPVWALIVSHFCHN 334 (371)
Q Consensus 301 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 334 (371)
++.+..........+.+|++..|...+.+....
T Consensus 75 -~k~~~~~~~~~s~~~~LK~K~tw~w~~~Yg~wL 107 (267)
T PF07672_consen 75 -EKENSTLSKKPSYKSILKEKETWKWILIYGIWL 107 (267)
T ss_pred -ccccccccccchHHHHHccchHHHHHHHHHHHh
Confidence 000111122467788999999997776665543
No 285
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=89.99 E-value=6.9 Score=34.02 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCc--hhHHHHHHHHHHHHHHhhhhh----cc-ChhHHHHHHHHHHhhhhchhh
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGK--AVLGFGVVWWSIATALTPVAA----KL-GLPFLLVVRVFMGIGEGVAMP 213 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~~~----~~-~~~~l~~~r~l~G~~~~~~~~ 213 (371)
-|.+.+.++++.++|+-+..++..|-..| ..+.+..++..+...+..+.. +. +...-+++..+.-.+.|..+|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 58999999999999999998888765444 455565555554444333322 11 233335566666677788999
Q ss_pred hHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHH
Q 017461 214 AMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 214 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 275 (371)
....+=+.+.|.+.|...+.++..-.++-..++-..-..-....+=|..|-++.+...+..+
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASI 425 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHH
Confidence 99999999999999998888876665554443321100000012346677776665554433
No 286
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=89.85 E-value=15 Score=33.26 Aligned_cols=95 Identities=14% Similarity=0.138 Sum_probs=59.9
Q ss_pred hhhhhhh-cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHH----HH-hhhhh--ccChhHHH
Q 017461 127 ILPMSAE-FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIAT----AL-TPVAA--KLGLPFLL 198 (371)
Q Consensus 127 ~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~----~~-~~~~~--~~~~~~l~ 198 (371)
+..++.. .|-..-+.+.+.+.|.....+|+...-++.|-=-.-+.+..-.++..++. ++ ..|+. ..+.+.+.
T Consensus 30 l~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly 109 (508)
T COG4262 30 LGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLY 109 (508)
T ss_pred HHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHH
Confidence 3344444 35567788999999999999999888887774322222222222221111 11 12332 11567888
Q ss_pred HHHHHHHhhhhchhhhHHHHHhc
Q 017461 199 VVRVFMGIGEGVAMPAMNNILSK 221 (371)
Q Consensus 199 ~~r~l~G~~~~~~~~~~~~~i~~ 221 (371)
++-++.|.-.|...|..+.++..
T Consensus 110 ~lt~vIG~LVG~EiPL~mrml~~ 132 (508)
T COG4262 110 ALTAVIGVLVGAEIPLLMRMLQR 132 (508)
T ss_pred HHHHHHHHHHhcchHHHHHHHHH
Confidence 88999999999999999888766
No 287
>PRK10263 DNA translocase FtsK; Provisional
Probab=89.17 E-value=4.9 Score=42.52 Aligned_cols=19 Identities=11% Similarity=-0.109 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHhhhhhC
Q 017461 149 FWGYLLTQIAGGIWADTVG 167 (371)
Q Consensus 149 ~~~~~~~~~~~g~l~dr~G 167 (371)
.++..+|..+...+..-||
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 4444555555555555555
No 288
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=88.71 E-value=5.3 Score=29.89 Aligned_cols=47 Identities=28% Similarity=0.326 Sum_probs=33.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
...+.......++..++..+.|.+.|..|.+..+.+...+..++.+.
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFIL 133 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence 44567777788888888899999998888777666655555444433
No 289
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=88.47 E-value=17 Score=32.08 Aligned_cols=82 Identities=12% Similarity=0.086 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh---hCCchhHHHHHH
Q 017461 101 KRWFIVVLCFSAFLLCNMDRVNMSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT---VGGKAVLGFGVV 177 (371)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr---~Grr~~~~~~~~ 177 (371)
++.+..+++.+++++.-+..+.++--+..+.+..+.-....++..+.... .+..+-.++ ||.||.=+++.+
T Consensus 22 r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hml~D~~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~ 95 (296)
T COG1230 22 RRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHMLSDALALLLALIAI------KLARRPATKRFTFGYKRLEILAAF 95 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHHHHHHHHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHH
Confidence 44444445555555555555555555666777777555555444443322 223333333 677777666666
Q ss_pred HHHHHHHHhhh
Q 017461 178 WWSIATALTPV 188 (371)
Q Consensus 178 ~~~i~~~~~~~ 188 (371)
+.++..+..++
T Consensus 96 ~nav~Li~~s~ 106 (296)
T COG1230 96 LNALLLIVVSL 106 (296)
T ss_pred HHHHHHHHHHH
Confidence 66555544443
No 290
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=88.25 E-value=14 Score=30.81 Aligned_cols=41 Identities=22% Similarity=0.348 Sum_probs=22.7
Q ss_pred cccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchh
Q 017461 221 KWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (371)
Q Consensus 221 ~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 261 (371)
++...+++.+--.......-++..+|..+++.+.+..+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~a 193 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWA 193 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 33333433333344455555666777777777777766533
No 291
>PF12832 MFS_1_like: MFS_1 like family
Probab=87.26 E-value=1.3 Score=30.25 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 324 WALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
+.+-..+++.+.+...+.-++|.|+++ .|+++.++|.+.++.
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~ 44 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIR 44 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHH
Confidence 345567788888889999999999998 799999999987654
No 292
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.37 E-value=4.2 Score=36.01 Aligned_cols=114 Identities=12% Similarity=0.076 Sum_probs=76.4
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHH
Q 017461 138 PATVGLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 216 (371)
Q Consensus 138 ~~~~~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 216 (371)
..|+-|....|.+|..+..--....-=+ .=--..+..-.+++.+...+..+.+ ++|..++.-+.-|+-.|..++...
T Consensus 287 ~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftp--si~ivf~lI~~EGLlGGasYVNTf 364 (409)
T KOG3880|consen 287 DSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTP--SIWIVFALILFEGLLGGASYVNTF 364 (409)
T ss_pred hhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhcc--HHHHHHHHHHHHhhcCchHHHHHH
Confidence 3457788888887644332111111000 0000122233344555566777888 899999999999988788888777
Q ss_pred HHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 217 NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 217 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
--+.+-.++++|-.+++.....-.+|..++.+++-.+
T Consensus 365 ~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 365 HNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 7777777899999999999999999988887776444
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=84.61 E-value=37 Score=32.44 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchh
Q 017461 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPS 261 (371)
Q Consensus 197 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~ 261 (371)
+++..++.-+..-..+++..++-+.+.+|.-=|++|-+.+...++|+---..+.-++.|.+.++.
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT~~~ 472 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFTVAT 472 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhccccc
Confidence 33446677777777888899999999999999999999999999887655555555555544443
No 294
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=84.08 E-value=19 Score=31.16 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-hCCchhHH----HHHHHHHHHHHHh-hhhhc--cChhHHHHHHHHHHhhhhchhh
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADT-VGGKAVLG----FGVVWWSIATALT-PVAAK--LGLPFLLVVRVFMGIGEGVAMP 213 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~~~----~~~~~~~i~~~~~-~~~~~--~~~~~l~~~r~l~G~~~~~~~~ 213 (371)
....-++..|..+|.+..|++... +-||+.+. ++++++++..+.. ....+ .+...+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 344445666666777777887764 45565544 3344444444332 11211 1366788888888887655555
Q ss_pred hHHHHHhcc--cCCcchHHHHHHHHHHHHHHHHH
Q 017461 214 AMNNILSKW--VPVAERSRSLALVYSGMYLGSVT 245 (371)
Q Consensus 214 ~~~~~i~~~--~~~~~r~~~~~~~~~~~~~g~~~ 245 (371)
....+-.|. ..|++-|...|+ .+++|.++
T Consensus 224 ViL~lPhEyK~~~pk~ig~~Fg~---iWGfGY~~ 254 (267)
T PF07672_consen 224 VILNLPHEYKGYNPKKIGIQFGL---IWGFGYIF 254 (267)
T ss_pred HHhcChhhhcCCCcceehhHHHH---HHHHHHHH
Confidence 554444444 234444544444 44444433
No 295
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=83.51 E-value=27 Score=32.08 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=91.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhhcCCC-cchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHh
Q 017461 108 LCFSAFLLCNMDRVNMSIAILPMSAEFNWN-PATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALT 186 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 186 (371)
.+.+++++.....-++......+..+++-+ -...+.-..+-.....+..++.|...|+..|+|++...+++--++.+++
T Consensus 31 ~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~va 110 (503)
T KOG2601|consen 31 FLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVA 110 (503)
T ss_pred hhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHH
Confidence 344555555555555665555544444422 2233333334445566778889999999999999988776644443333
Q ss_pred ------hhhhc----cChhHHHHHHHHHHhhhhch--hhhHHHHH--hccc----CCcchHHHH---HHHHHHHHHHHHH
Q 017461 187 ------PVAAK----LGLPFLLVVRVFMGIGEGVA--MPAMNNIL--SKWV----PVAERSRSL---ALVYSGMYLGSVT 245 (371)
Q Consensus 187 ------~~~~~----~~~~~l~~~r~l~G~~~~~~--~~~~~~~i--~~~~----~~~~r~~~~---~~~~~~~~~g~~~ 245 (371)
.+... .++..+..+-++.-...+.. ...+.+++ -||. ..+.+..+. +..-..=..-..+
T Consensus 111 gglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~L 190 (503)
T KOG2601|consen 111 GGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLL 190 (503)
T ss_pred HHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhch
Confidence 23221 14555555555444332221 11112211 2221 234444444 4444444456788
Q ss_pred HHHhHHHHhcccCchhHHHHHhHHHHH
Q 017461 246 GLAFSPFLIHRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 246 g~~~~~~l~~~~gw~~~f~~~~~~~~~ 272 (371)
.|.+.|.+.+..+-|..-..+++..++
T Consensus 191 apv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 191 APVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhhhhcccceeechhhhhhhhHHHHHH
Confidence 899999999888877766666655555
No 296
>PRK11588 hypothetical protein; Provisional
Probab=81.63 E-value=29 Score=33.19 Aligned_cols=33 Identities=12% Similarity=0.064 Sum_probs=18.9
Q ss_pred HHHHhhhhhCCchhHH--HHHHHHHHHHHHhhhhh
Q 017461 158 AGGIWADTVGGKAVLG--FGVVWWSIATALTPVAA 190 (371)
Q Consensus 158 ~~g~l~dr~Grr~~~~--~~~~~~~i~~~~~~~~~ 190 (371)
..+++..|++.|..++ +.+++++++....+++.
T Consensus 135 ~i~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~E 169 (506)
T PRK11588 135 GILALIRKTRGNEILFIPVLFILFSLGGAVFGMGE 169 (506)
T ss_pred HHHHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhH
Confidence 3466778887764433 44445555555555555
No 297
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=79.48 E-value=66 Score=31.60 Aligned_cols=63 Identities=14% Similarity=0.153 Sum_probs=56.4
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
|.++++--.++.|++.........-+.=+-+|++-|..+.+++....++|..+...+......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888889999999999988888888899999999999999999999999999888866544
No 298
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=78.96 E-value=2.9 Score=34.94 Aligned_cols=55 Identities=31% Similarity=0.417 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 198 LVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 198 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
...-.-.|+|.|.++.++..-+.+.+| +......++....+.+....|-.+.-++
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P-~~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYP-EMADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCc-chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556789999999999898999995 6777777777777777777766555444
No 299
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=78.88 E-value=11 Score=27.30 Aligned_cols=19 Identities=21% Similarity=0.116 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 017461 148 FFWGYLLTQIAGGIWADTV 166 (371)
Q Consensus 148 ~~~~~~~~~~~~g~l~dr~ 166 (371)
-.++..+.....||+.|||
T Consensus 51 efIsGilVGa~iG~llD~~ 69 (116)
T COG5336 51 EFISGILVGAGIGWLLDKF 69 (116)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 3455555566778999986
No 300
>COG1288 Predicted membrane protein [Function unknown]
Probab=77.96 E-value=23 Score=32.93 Aligned_cols=26 Identities=15% Similarity=0.410 Sum_probs=17.5
Q ss_pred HhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 253 LIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 253 l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
+.+-.+||.+.|+...+..+..+..+
T Consensus 212 ~~sG~~~Riv~~v~~~~~~i~y~~~Y 237 (481)
T COG1288 212 FLSGMGLRIVVWVVFTLISIIYVYWY 237 (481)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHH
Confidence 44557899999987776655544443
No 301
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=76.89 E-value=18 Score=31.91 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhc
Q 017461 174 FGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 174 ~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
.++++++++.++..+... +.|.+.+.-++.+++.+.
T Consensus 4 ~~~~~~~~~s~~~~l~~~-~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFP-YPWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHH
Confidence 344444344444444431 455555555555555443
No 302
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=75.95 E-value=51 Score=28.45 Aligned_cols=25 Identities=4% Similarity=-0.314 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHh
Q 017461 327 IVSHFCHNWGTFILLTWMPTYYNQV 351 (371)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (371)
.+...+.....++....=..|+++.
T Consensus 184 G~~LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 184 GIILAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred hHHHHHHHHHHHhcccchHHHHHhC
Confidence 3333344444555554445666664
No 303
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.70 E-value=7.9 Score=28.04 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=44.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
+..|-+..+|.-.+++.++++++..|+.-+-+-=.+|..++.+|..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5678889999999999999999999999888888888888888877665543
No 304
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=74.52 E-value=82 Score=30.10 Aligned_cols=154 Identities=12% Similarity=0.031 Sum_probs=88.5
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhH----------HHHHHHHHHHHHHhhhhh--
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVL----------GFGVVWWSIATALTPVAA-- 190 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~----------~~~~~~~~i~~~~~~~~~-- 190 (371)
++.+.-.++.+.- +..|..-....+.++..++.+++|.+.--+++++-. ..-..+.++..+++.+..
T Consensus 165 ~S~lFw~faNeit-t~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~ 243 (509)
T COG3202 165 LSLLFWQFANEIT-TIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRY 243 (509)
T ss_pred HHHHHHHHHHHhh-hHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444433 566777778888888888888888887777653222 111111111112221110
Q ss_pred ------------------c----------cC---------hhHHHHHHHHHHhhhhchhhhHHHHHhcccC-CcchHHHH
Q 017461 191 ------------------K----------LG---------LPFLLVVRVFMGIGEGVAMPAMNNILSKWVP-VAERSRSL 232 (371)
Q Consensus 191 ------------------~----------~~---------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~-~~~r~~~~ 232 (371)
. .+ ...+.+.-.+-|++.......--.-+.+.+| .+++...+
T Consensus 244 ~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~ 323 (509)
T COG3202 244 INRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFM 323 (509)
T ss_pred HHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHH
Confidence 0 01 1222233344455555555555556777776 34567778
Q ss_pred HHHHHHHHHH-HHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHH
Q 017461 233 ALVYSGMYLG-SVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 233 ~~~~~~~~~g-~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
|-++...++- .++.-.+++-+....||-+.-.+.-++.++..+++
T Consensus 324 ~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg~lF 369 (509)
T COG3202 324 GRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITGVLF 369 (509)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 8887777776 66777788889999999887776666655554443
No 305
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=72.27 E-value=78 Score=28.85 Aligned_cols=122 Identities=14% Similarity=0.142 Sum_probs=74.9
Q ss_pred cCCCcchHHHHHHHH-----HHHHHHHHHHHHHhhhhhC--CchhHHHHHHHHHHHHHHhhhhhccChh-----------
Q 017461 134 FNWNPATVGLIQSSF-----FWGYLLTQIAGGIWADTVG--GKAVLGFGVVWWSIATALTPVAAKLGLP----------- 195 (371)
Q Consensus 134 ~~~~~~~~~~~~s~~-----~~~~~~~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~~----------- 195 (371)
.|.+.+..+-..... .+..++.++++..+.|..| ++..+..+..+.+++.++......-|+.
T Consensus 153 ~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~ 232 (354)
T PF05631_consen 153 RGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGDTSSSSSLSGS 232 (354)
T ss_pred cCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCCcccccchHHH
Confidence 355555555444422 2344555556666666665 5767777777777776655432100111
Q ss_pred -----HHHHH---HHHHHhhhhchhhhHHHHHhcccCC---cchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 196 -----FLLVV---RVFMGIGEGVAMPAMNNILSKWVPV---AERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 196 -----~l~~~---r~l~G~~~~~~~~~~~~~i~~~~~~---~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
..+.. -.+.|+.+++.....+..+-.|.|. +.+..=.|++.....+..++|..+-..+..
T Consensus 233 ~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s 303 (354)
T PF05631_consen 233 FREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPLGLIFSSFMVAMMLGSSLFSRLLS 303 (354)
T ss_pred HHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 1467788888888889998888873 334556888888888888888877765554
No 306
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=70.95 E-value=60 Score=28.66 Aligned_cols=56 Identities=11% Similarity=0.055 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 197 LLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 197 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
.-..|.+.|+-.= .+..+++++.-.||.+++--..--.....++..++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888887653 4577889999999865443222223344444455555555444
No 307
>PRK02237 hypothetical protein; Provisional
Probab=70.87 E-value=14 Score=26.84 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=43.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
+..|-+..+|.-.+++.+++++++.|+.-.-+-=.+|..++.+|..+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 4478899999999999999999999999877777788888888776655543
No 308
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=70.02 E-value=34 Score=23.85 Aligned_cols=61 Identities=13% Similarity=0.004 Sum_probs=39.3
Q ss_pred chhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 210 VAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 210 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
...|..+.++.|.--.. ..-|+....+.+|..+|.++...+.++...+..+....+.+.+.
T Consensus 10 ayTplLP~M~~~~~ls~---~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 10 AYTPLLPLMQADGGLSL---SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHhHhHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 34566666666654332 33477788889999999998888877655555555544444443
No 309
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=68.27 E-value=85 Score=32.04 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHH
Q 017461 236 YSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLG 270 (371)
Q Consensus 236 ~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~ 270 (371)
..+..++.++..+++.++...++|...+++.++++
T Consensus 107 ~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 107 VPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 33334444444444444434456666666655544
No 310
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=68.26 E-value=34 Score=32.37 Aligned_cols=11 Identities=18% Similarity=0.283 Sum_probs=9.6
Q ss_pred ChhHHHHHHHH
Q 017461 193 GLPFLLVVRVF 203 (371)
Q Consensus 193 ~~~~l~~~r~l 203 (371)
+||.+++.|++
T Consensus 180 syWLFY~vrIl 190 (505)
T PF06638_consen 180 SYWLFYGVRIL 190 (505)
T ss_pred HHHHHhhheee
Confidence 78999998887
No 311
>COG3619 Predicted membrane protein [Function unknown]
Probab=68.22 E-value=74 Score=26.94 Aligned_cols=67 Identities=10% Similarity=0.066 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhh-hhhh-------hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCC
Q 017461 102 RWFIVVLCFSAFLLCNMDRVNMSIA-ILPM-------SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGG 168 (371)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Gr 168 (371)
.++.+.+++.+.+++.+.+...+-. ...+ .-++.-.+...........+.++++......+..|..|
T Consensus 10 l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 10 LRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445556666666666655332211 1111 11122234445555666666777775555555555544
No 312
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=67.63 E-value=33 Score=35.38 Aligned_cols=60 Identities=12% Similarity=0.006 Sum_probs=35.4
Q ss_pred hhhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHH
Q 017461 123 MSIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATA 184 (371)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 184 (371)
+.-....+...+|++....|+.+.+ +|..+.-++....+-|-|...+.+..++..-++.+
T Consensus 952 lV~~at~IG~vlGIse~VmGlTfLA--~GTSIPDlisSvivArkG~gdMAVan~iGSNIFnI 1011 (1096)
T TIGR00927 952 MVWWAHQVGETIGISEEIMGLTILA--AGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDI 1011 (1096)
T ss_pred HHHHHHHhhhhcCCChhhhhhhhhh--hhcccHHHHHHHHHHHccCCcceeeeccccchhee
Confidence 3344555777788888887766554 36666666666666666655554444433333333
No 313
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=67.30 E-value=48 Score=30.72 Aligned_cols=137 Identities=12% Similarity=0.001 Sum_probs=83.5
Q ss_pred hhhhhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhh------hCCchhHHHHHHHHHHHHHHhhhhh---c---
Q 017461 124 SIAILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADT------VGGKAVLGFGVVWWSIATALTPVAA---K--- 191 (371)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr------~Grr~~~~~~~~~~~i~~~~~~~~~---~--- 191 (371)
..+.+.-.-|.|++.++.+++.....-..++.+...|++... +-|+..+-++.. .+..++....+ .
T Consensus 285 da~t~LkLle~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~--~~~t~Lv~~~~~~~~~~G 362 (510)
T KOG3574|consen 285 DALTSLKLLEHGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGG--LVQTALVWWTPTLGHSDG 362 (510)
T ss_pred hhccchHHHHcCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHH--HHHHHHHhhhcccccCCC
Confidence 344555567889999998887744333444444444544431 222211111111 11112211111 0
Q ss_pred ---cCh-hHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhH
Q 017461 192 ---LGL-PFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSV 262 (371)
Q Consensus 192 ---~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~ 262 (371)
..+ -.++....+.+...-..+...++..+.+.++.--|+.+.+.+...++|.---..+...+.|.++|+-+
T Consensus 363 ~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~ltv~~C 437 (510)
T KOG3574|consen 363 TFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLTVKQC 437 (510)
T ss_pred ceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCceeec
Confidence 012 23333466666666667788899999999999999999999999999987777778888887777653
No 314
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=66.09 E-value=70 Score=32.31 Aligned_cols=53 Identities=15% Similarity=0.038 Sum_probs=32.9
Q ss_pred HHHHhhhh----hCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhch
Q 017461 158 AGGIWADT----VGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (371)
Q Consensus 158 ~~g~l~dr----~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 211 (371)
+.+-++|. -||.+-++++.++++++.+...+... ..|.+.++-++.+++.+..
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~-~p~lf~~~l~~~tf~~~ml 98 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFG-KPWLFAVGLTVSTFGFIML 98 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHH
Confidence 34556664 35667777888888877777666552 4555666666666655443
No 315
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=63.19 E-value=78 Score=32.02 Aligned_cols=55 Identities=16% Similarity=0.049 Sum_probs=34.7
Q ss_pred HHHHHHhhhhh----CCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhch
Q 017461 156 QIAGGIWADTV----GGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVA 211 (371)
Q Consensus 156 ~~~~g~l~dr~----Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 211 (371)
+.+++-+.|.= ||.+-++++.++++++.+...+... ..|.+.++-++.+++.+..
T Consensus 40 G~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~-~p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 40 GIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFP-KPWLFPFLLTLLTFGFILL 98 (701)
T ss_pred hhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHH
Confidence 33445566643 4567788888888888877776652 3455555566666665543
No 316
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.21 E-value=33 Score=26.92 Aligned_cols=51 Identities=24% Similarity=0.176 Sum_probs=34.6
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (371)
++..+++..++.|+| ...+.|.+++--.++++-|..+|+-.+-.+++-+.-
T Consensus 96 ~~~~~~~S~~~Fg~g---llGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLG---LLGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred chHHHHHHHHHHHHH---HHhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 444555555555544 234566677777888889999999888888876543
No 317
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=61.12 E-value=47 Score=33.24 Aligned_cols=60 Identities=15% Similarity=0.113 Sum_probs=49.4
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPF 252 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~ 252 (371)
+.++.+--.++.|+|.........-+.-.-.|+..+....+++....++|.++...+..+
T Consensus 564 ~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~ 623 (654)
T TIGR00926 564 SILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEF 623 (654)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777778888998888877777778888899999999999998888888887766644
No 318
>COG2119 Predicted membrane protein [Function unknown]
Probab=60.25 E-value=92 Score=25.32 Aligned_cols=78 Identities=15% Similarity=0.254 Sum_probs=46.1
Q ss_pred HHHHHHHHHHH-HHhhhhhhhhhhhhhhhhcCCCcch-HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHH
Q 017461 105 IVVLCFSAFLL-CNMDRVNMSIAILPMSAEFNWNPAT-VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIA 182 (371)
Q Consensus 105 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 182 (371)
++...+...|+ ...|.+-+.. -.+..+++..... +|- .....+...++...+.++++|+..|.+-.++.+++.+.
T Consensus 101 ~f~~tfi~~FlaE~GDKTQiAT--IaLaA~~~~~~~V~~Gt-~lg~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~f 177 (190)
T COG2119 101 VFVTTFITFFLAELGDKTQIAT--IALAADYHSPWAVFAGT-TLGMILASVLAVLLGKLIAGKLPERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHhccHHHHHH--HHHhhcCCCceeeehhh-HHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHH
Confidence 44444444444 3444443332 3355666642222 222 22345677788888899999999999988877776665
Q ss_pred HHH
Q 017461 183 TAL 185 (371)
Q Consensus 183 ~~~ 185 (371)
.+.
T Consensus 178 al~ 180 (190)
T COG2119 178 ALV 180 (190)
T ss_pred HHH
Confidence 533
No 319
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=59.52 E-value=64 Score=27.82 Aligned_cols=52 Identities=21% Similarity=0.264 Sum_probs=27.2
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLA 248 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 248 (371)
|...++.+....|+-.. .....-++....| +|.....+...++++|..+-..
T Consensus 33 s~~FyY~sg~~lGv~~s--~li~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~ 84 (249)
T PF10225_consen 33 SVLFYYSSGISLGVLAS--LLILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQ 84 (249)
T ss_pred ChhHHHhhhHHHHHHHH--HHHHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHH
Confidence 66666666666665433 2333445678887 4444444444444555444333
No 320
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=59.24 E-value=38 Score=20.62 Aligned_cols=38 Identities=13% Similarity=0.072 Sum_probs=18.1
Q ss_pred HHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 241 LGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 241 ~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
+|+.+|..+.+.+....++.+.-++.++++.+.++..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 34444444444333333345555556666555555444
No 321
>COG4769 Predicted membrane protein [Function unknown]
Probab=58.05 E-value=24 Score=27.92 Aligned_cols=53 Identities=11% Similarity=0.027 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhh
Q 017461 147 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG 207 (371)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~ 207 (371)
++.+...+.+...-++..++|+|.+-.+|...+ -++.+ |..++++.+++.|-.
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~h--Nl~QLivas~Lv~~~ 133 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTH--NLGQLIVASFLVFTT 133 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHH--hHHHHHHHHHHHhcc
Confidence 445566677777788899999998755554333 35777 889999998887643
No 322
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=56.33 E-value=52 Score=25.74 Aligned_cols=25 Identities=16% Similarity=0.419 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhCCch
Q 017461 146 SSFFWGYLLTQIAGGIWADTVGGKA 170 (371)
Q Consensus 146 s~~~~~~~~~~~~~g~l~dr~Grr~ 170 (371)
.-|.+++.++..+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 3677889999999999999998874
No 323
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=55.80 E-value=1.8e+02 Score=27.28 Aligned_cols=98 Identities=8% Similarity=-0.027 Sum_probs=57.3
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH-hhhhhccChhHHHHHHHHHHhhhh
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAAKLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~~r~l~G~~~~ 209 (371)
.... +++++...+.+...+...++.++-+....+. -|-....|.....++... ..... ++...+.+-++.|+...
T Consensus 30 ~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~-~~lp~~~G~sfa~i~~~~~~~~~~--~~~~~~g~~i~~gl~~~ 105 (415)
T TIGR00801 30 GLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQ-IGLPSYLGSSFAFVSPMIAIGSGL--GIPAIMGALIATGLVYT 105 (415)
T ss_pred hccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-eeeeeeecCcHHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHH
Confidence 4455 7889999999999999999999998877654 222232333222222222 22222 45555555566665544
Q ss_pred chhhh----HHHHHhcccCCcchHHHH
Q 017461 210 VAMPA----MNNILSKWVPVAERSRSL 232 (371)
Q Consensus 210 ~~~~~----~~~~i~~~~~~~~r~~~~ 232 (371)
..... ....+.+.+|+.-.+...
T Consensus 106 ll~~~~~~~~~~~i~~~~Pp~v~g~iv 132 (415)
T TIGR00801 106 LLSLLIKKLGPRWLMKLFPPVVTGPVV 132 (415)
T ss_pred HHHHHHHHhhHHHHHhcCCchhHHHhH
Confidence 43222 233557888888777543
No 324
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=55.00 E-value=1.8e+02 Score=27.10 Aligned_cols=99 Identities=10% Similarity=0.104 Sum_probs=62.9
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhc
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGV 210 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 210 (371)
.+..|++.++...+.+...++..++.++-.+-.-++|.|..+..+.....++........ ..+...+.+-++.|+-.-.
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~-~~~~~~~ga~~v~Gii~il 98 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAG-GGLGAIFGAVIVAGLFVIL 98 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHH
Confidence 445689988888888888888888888875333367888777766655444433332222 2566666666777765444
Q ss_pred hhhhHHHHHhcccCCcchHHH
Q 017461 211 AMPAMNNILSKWVPVAERSRS 231 (371)
Q Consensus 211 ~~~~~~~~i~~~~~~~~r~~~ 231 (371)
.. .....+.+.+|+.-.|..
T Consensus 99 lg-~~~~~l~~~iPp~v~G~~ 118 (406)
T TIGR03173 99 LA-PFFSKLVRFFPPVVTGTV 118 (406)
T ss_pred HH-HHHHHHHHHCCcHHHHHH
Confidence 33 355567788887655543
No 325
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=51.76 E-value=62 Score=26.40 Aligned_cols=23 Identities=13% Similarity=0.494 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhCC
Q 017461 146 SSFFWGYLLTQIAGGIWADTVGG 168 (371)
Q Consensus 146 s~~~~~~~~~~~~~g~l~dr~Gr 168 (371)
.-|.+++.++.++.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45778899999999999999885
No 326
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=51.12 E-value=6.7 Score=29.94 Aligned_cols=18 Identities=11% Similarity=0.187 Sum_probs=9.3
Q ss_pred hhHHHHHhHHHHHHHHHH
Q 017461 260 PSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~ 277 (371)
||++++..++.+++++++
T Consensus 1 RW~l~~iii~~i~l~~~~ 18 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFL 18 (130)
T ss_pred CeeeHHHHHHHHHHHHHH
Confidence 566665555544444433
No 327
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=50.62 E-value=1.8e+02 Score=25.76 Aligned_cols=33 Identities=12% Similarity=0.114 Sum_probs=17.0
Q ss_pred hhHHHHHHHHHHhhhhch-hhhHHHHHhcccCCc
Q 017461 194 LPFLLVVRVFMGIGEGVA-MPAMNNILSKWVPVA 226 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~-~~~~~~~i~~~~~~~ 226 (371)
.+.-.+.-.+.+++.|.+ +....-++.|....+
T Consensus 260 ~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 260 SSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344455566677766653 333334555555433
No 328
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=50.22 E-value=2.3e+02 Score=26.78 Aligned_cols=72 Identities=11% Similarity=0.067 Sum_probs=39.4
Q ss_pred HHHHHhhhhhCCch-----hHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHH
Q 017461 157 IAGGIWADTVGGKA-----VLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS 231 (371)
Q Consensus 157 ~~~g~l~dr~Grr~-----~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 231 (371)
+..=.+.+.+.+++ -+++|+.++..-.++.+++.+.++ ..+..+... .+......|+......++||..
T Consensus 309 F~~fflfE~~~~~~iHpiQY~LVGlAl~lFYlLLLSlSEhi~F---~~AYliAa~---a~i~Li~~Y~~~vl~~~k~~~~ 382 (430)
T PF06123_consen 309 FLAFFLFELLSKLRIHPIQYLLVGLALVLFYLLLLSLSEHIGF---NLAYLIAAL---ACIGLISLYLSSVLKSWKRGLI 382 (430)
T ss_pred HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhhch---HHHHHHHHH---HHHHHHHHHHHHHHhcchHHHH
Confidence 33334455554444 356777777777788888874433 333333322 2334455666677766666655
Q ss_pred HHH
Q 017461 232 LAL 234 (371)
Q Consensus 232 ~~~ 234 (371)
++.
T Consensus 383 ~~~ 385 (430)
T PF06123_consen 383 FAG 385 (430)
T ss_pred HHH
Confidence 433
No 329
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=50.17 E-value=77 Score=30.24 Aligned_cols=10 Identities=20% Similarity=0.401 Sum_probs=4.8
Q ss_pred HhhhhhCCch
Q 017461 161 IWADTVGGKA 170 (371)
Q Consensus 161 ~l~dr~Grr~ 170 (371)
.+..++++|+
T Consensus 106 ~l~k~l~~~~ 115 (465)
T PF03606_consen 106 LLIKPLKGKK 115 (465)
T ss_pred HHHHHhcCCc
Confidence 3445555443
No 330
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=49.01 E-value=1.8e+02 Score=25.16 Aligned_cols=50 Identities=24% Similarity=0.232 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhhcc
Q 017461 231 SLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLSKA 281 (371)
Q Consensus 231 ~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 281 (371)
-+.....+..+|..+| ++.|.+.|++|-+.+..+.++...+.-...+...
T Consensus 38 ~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 38 QLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred HHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888898886 7788999999877777777777776655555443
No 331
>PRK11715 inner membrane protein; Provisional
Probab=48.87 E-value=2.2e+02 Score=26.95 Aligned_cols=76 Identities=12% Similarity=0.106 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhhhhCCchh-----HHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcc
Q 017461 153 LLTQIAGGIWADTVGGKAV-----LGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE 227 (371)
Q Consensus 153 ~~~~~~~g~l~dr~Grr~~-----~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 227 (371)
+...+..=.+.+...++++ +++|+.+...-.++.+++.+.++. .+..+... .+......|+.......+
T Consensus 311 I~LTF~~fFlfE~~~~~~iHpiQYlLVGlAl~lFYLLLLSlSEHigF~---~AYliAa~---a~v~li~~Y~~~vl~~~k 384 (436)
T PRK11715 311 IALTFAAFFLFELLKKLRIHPVQYLLVGLALVLFYLLLLSLSEHIGFT---LAYLIAAL---ACVLLIGFYLSAVLRSWK 384 (436)
T ss_pred HHHHHHHHHHHHHhcCceecHHHHHHHHHHHHHHHHHHHHHHhhhchH---HHHHHHHH---HHHHHHHHHHHHHHhcch
Confidence 3333344445565555543 566777767677778888744333 23333222 223344456666666667
Q ss_pred hHHHHHH
Q 017461 228 RSRSLAL 234 (371)
Q Consensus 228 r~~~~~~ 234 (371)
||..++.
T Consensus 385 ~g~~~~~ 391 (436)
T PRK11715 385 RGLLFAA 391 (436)
T ss_pred HHHHHHH
Confidence 7655543
No 332
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=48.84 E-value=1.5e+02 Score=27.26 Aligned_cols=14 Identities=14% Similarity=0.038 Sum_probs=9.9
Q ss_pred hhhhCCchhHHHHH
Q 017461 163 ADTVGGKAVLGFGV 176 (371)
Q Consensus 163 ~dr~Grr~~~~~~~ 176 (371)
.||+.-.|++...+
T Consensus 208 ~e~ft~sKllav~~ 221 (416)
T KOG2765|consen 208 VERFTLSKLLAVFV 221 (416)
T ss_pred cchhhHHHHHHHHH
Confidence 89998877665443
No 333
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=47.25 E-value=2.2e+02 Score=25.86 Aligned_cols=120 Identities=8% Similarity=0.009 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHH---HHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHH
Q 017461 142 GLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWW---SIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNI 218 (371)
Q Consensus 142 ~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~---~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 218 (371)
|.+..+..+ .-+-.++.+++...+|.-+.+..+.++. +--.+...++. |.........+.|.-.|....-...+
T Consensus 50 GI~~laP~l-a~~l~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~--~~~~~~fsG~ilgsmlG~TIvFtIPV 126 (354)
T PF04346_consen 50 GIMALAPVL-AAFLSPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQ--DPEAGIFSGLILGSMLGATIVFTIPV 126 (354)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcC--ChhhHHHHHHHHHHhhcccEEeehhh
Confidence 433333333 3345567788899999999999887774 33446667777 66666666667776556544333333
Q ss_pred HhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHh
Q 017461 219 LSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFG 267 (371)
Q Consensus 219 i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~ 267 (371)
.-...+ ++++-.+.|+...... .-+|.++++.+.. ++|...+.-..
T Consensus 127 aLgii~k~D~~y~a~Gil~Giit--IPiG~~vggl~~g-~~~~~il~Nl~ 173 (354)
T PF04346_consen 127 ALGIIEKEDHKYLAKGILAGIIT--IPIGCFVGGLIAG-FDIGMILINLI 173 (354)
T ss_pred hhhhcChhhhHHHHHHHHHHHhh--hCHHHHHHHHHHh-CCHHHHHHHHH
Confidence 333333 3444555555443322 2233444444432 45555554433
No 334
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=44.09 E-value=1.6e+02 Score=23.23 Aligned_cols=35 Identities=26% Similarity=0.300 Sum_probs=26.3
Q ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCc
Q 017461 134 FNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGK 169 (371)
Q Consensus 134 ~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr 169 (371)
+.+ +..+.++.+...+|..+.++-.|.|+-.+...
T Consensus 92 ~dv-P~~~~~~~S~~~Fg~gllGisYGilSaSWD~~ 126 (153)
T PF11947_consen 92 VDV-PPWAVLLVSLVFFGLGLLGISYGILSASWDPE 126 (153)
T ss_pred ccc-CchHHHHHHHHHHHHHHHhhhhhhcccccCCC
Confidence 443 34566777778888888899999999888654
No 335
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=43.92 E-value=1.2e+02 Score=21.89 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 232 LALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 232 ~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
+|.++....+..++|.++|-+|-..++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 344455555666777777777777665
No 336
>COG5547 Small integral membrane protein [Function unknown]
Probab=43.84 E-value=80 Score=19.97 Aligned_cols=39 Identities=21% Similarity=0.208 Sum_probs=18.2
Q ss_pred chhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhh
Q 017461 169 KAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 169 r~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 209 (371)
|..++.+++...++.++.++.- --..+++.-.+.|++.|
T Consensus 8 kypIIgglvglliAili~t~Gf--wKtilviil~~lGv~iG 46 (62)
T COG5547 8 KYPIIGGLVGLLIAILILTFGF--WKTILVIILILLGVYIG 46 (62)
T ss_pred ccchHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 3445555555555555555433 22233333444444444
No 337
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=43.67 E-value=30 Score=25.28 Aligned_cols=32 Identities=22% Similarity=0.188 Sum_probs=24.2
Q ss_pred cccCchhHHHHHhHHHHHHHHHHhhcccCCCC
Q 017461 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAHSSPA 286 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 286 (371)
+..+|+.+|++...++++++.+.+.+.||...
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i 86 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTSI 86 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCH
Confidence 45689999998888888877777777776543
No 338
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=42.51 E-value=1.7e+02 Score=26.24 Aligned_cols=61 Identities=11% Similarity=0.063 Sum_probs=31.3
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
...+.++-++.|++.+....-...+..|.+. -......-++....+.|...||.+|..+..
T Consensus 208 l~aF~isa~~AGiAGaL~a~~~~~v~p~~f~-~~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~~ 268 (314)
T COG4177 208 LLAFVISAAIAGIAGALYALYLGFVSPESFS-FTLSIEVLAMVVLGGAGTLFGALLGAVLVV 268 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhceeChhhcc-HHHHHHHHHHHHHcCccccHHHHHHHHHHH
Confidence 3455666666666644332222222233332 223333333455666778888888877654
No 339
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=40.50 E-value=96 Score=19.72 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=23.6
Q ss_pred HHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHhh
Q 017461 239 MYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 239 ~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
.-+|.++|...+......+++.....+..+.+++..++...
T Consensus 11 ~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~ 51 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAV 51 (57)
T ss_pred HHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 34556666555544444567777666666666655555443
No 340
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=40.49 E-value=1.4e+02 Score=21.59 Aligned_cols=23 Identities=26% Similarity=0.343 Sum_probs=11.6
Q ss_pred HHHHHHHHHhhhh-hCCchhHHHH
Q 017461 153 LLTQIAGGIWADT-VGGKAVLGFG 175 (371)
Q Consensus 153 ~~~~~~~g~l~dr-~Grr~~~~~~ 175 (371)
.+.+.+.|.+.|+ ||-++.+.+.
T Consensus 56 il~G~~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 56 TLLGVAVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHHHHHHhhcCCCcHHHHH
Confidence 3444555666664 5554444333
No 341
>PF03706 UPF0104: Uncharacterised protein family (UPF0104); InterPro: IPR022791 This family of proteins are integral membrane proteins. These proteins are uncharacterised but contain a conserved PG motif. Some members of this family are annotated as dolichol-P-glucose synthetase and contain a PF00535 from PFAM domain. This entry also contains proteins of unknown function that are involved in the addition of lysine to phosphatidylglycerol (lysylphosphatidylglycerol synthetase, L-PG synthase). L-PG synthase produces lysyl-phosphatidylglycerol (L-PG), the major component of the bacterial membrane and responsible for its positive charge. L-PG synthesis contributes to bacterial virulence as it is involved in the cationic antimicrobial peptides (CAMP) resistance mechanism of the host's immune system (defensins, cathelicidins) and of the competing microorganisms (bacteriocins).
Probab=40.21 E-value=2.5e+02 Score=24.41 Aligned_cols=56 Identities=14% Similarity=0.065 Sum_probs=38.9
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh
Q 017461 135 NWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 135 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
+.+...+.+......+...+-..-+-.+..+.|.|..+.-+.....++..+..+.+
T Consensus 23 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~i~P 78 (294)
T PF03706_consen 23 SANPWWLLLALLLSLLSYVLRALRWRLLLRRLGHRISFRDALRISFIGFFLNNITP 78 (294)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45566666666677777778888888888888877777766666666555544443
No 342
>PRK03818 putative transporter; Validated
Probab=40.11 E-value=2.9e+02 Score=27.13 Aligned_cols=84 Identities=8% Similarity=0.017 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNIL 219 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i 219 (371)
+.|+...++.+|...+.-+..-+....|.+..+ ++.++..+..++..+... .+.-+=..+.+-.++.+...+...+++
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~~-~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~G~~aG~~t~tp~l~~a 513 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWIG-YGFLITAVPLLIVGILAR-MLAKMNYLTLCGMLAGSMTDPPALAFA 513 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHHH-HHHHHHHHHHHHHHHHHH-HHHcCCHHHHHHHHhccCCCcHHHHHH
Confidence 467777777777777776766665555655443 444444443333322210 111111122222233344567777888
Q ss_pred hcc-cCC
Q 017461 220 SKW-VPV 225 (371)
Q Consensus 220 ~~~-~~~ 225 (371)
.|. ...
T Consensus 514 ~~~~~~~ 520 (552)
T PRK03818 514 NNLHPTS 520 (552)
T ss_pred hcccCCC
Confidence 885 433
No 343
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.19 E-value=84 Score=22.95 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=23.1
Q ss_pred HHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhh
Q 017461 179 WSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPA 214 (371)
Q Consensus 179 ~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~ 214 (371)
..+|.++==++. +-.+.++...+.|++.|.....
T Consensus 60 a~iG~llD~~ag--TsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 60 AGIGWLLDKFAG--TSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred HHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHHH
Confidence 345566666666 5566777778899998876544
No 344
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=38.09 E-value=1.4e+02 Score=20.88 Aligned_cols=41 Identities=7% Similarity=-0.053 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhhhhCC-------chhHHHHHHHHHHHHHHhhhhh
Q 017461 150 WGYLLTQIAGGIWADTVGG-------KAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 150 ~~~~~~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~ 190 (371)
.+...+.+..+++.+|..+ ++.+.++.++...+.++++.-+
T Consensus 29 a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqr 76 (86)
T PF10785_consen 29 AGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQR 76 (86)
T ss_pred HHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666777776654 7888888888888888887766
No 345
>KOG1484 consensus Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily) [Inorganic ion transport and metabolism]
Probab=38.05 E-value=3.1e+02 Score=24.81 Aligned_cols=23 Identities=30% Similarity=0.479 Sum_probs=15.4
Q ss_pred HHHHHHhHHHHhcccCchhHHHH
Q 017461 243 SVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 243 ~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
+.+|-++...+.+..||-+.=-+
T Consensus 220 gSvGviist~Li~~~gw~~aDpi 242 (354)
T KOG1484|consen 220 GSVGVIISTLLIKLFGWMIADPI 242 (354)
T ss_pred cchHHHHHHHHHHhcCccchhHH
Confidence 34556677788888898664433
No 346
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=38.04 E-value=3.6e+02 Score=25.63 Aligned_cols=122 Identities=11% Similarity=0.046 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 107 VLCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
++..+-..+..+... +..|. +...+|++.++...+.+.-.+...++.++--....++|-|-....+..+..++.++
T Consensus 19 ~~lglQH~lamfg~~---V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i 95 (451)
T COG2233 19 LLLGLQHLLAMFGAT---VLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMI 95 (451)
T ss_pred HHHHHHHHHHHHhcc---hHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHH
Confidence 344455554444322 22333 46789999999999999999999999888777544567676666676666666655
Q ss_pred hhhhhc-cChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHH
Q 017461 186 TPVAAK-LGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRS 231 (371)
Q Consensus 186 ~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 231 (371)
...... .....++.+-+..|+..-...+.....+...+||---|..
T Consensus 96 ~~~~~~g~~~~~~~G~ii~ag~~~~li~~~~~~~l~rlfPPvVtG~V 142 (451)
T COG2233 96 AIGGTTGDGIAALLGGIIAAGLVYFLISPIVKIRLARLFPPVVTGPV 142 (451)
T ss_pred HHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeE
Confidence 544431 0355666666666665544333332277788888665543
No 347
>PRK15049 L-asparagine permease; Provisional
Probab=38.03 E-value=3.2e+02 Score=26.33 Aligned_cols=18 Identities=6% Similarity=0.049 Sum_probs=9.2
Q ss_pred CchhHHHHHhHHHHHHHH
Q 017461 258 GWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 258 gw~~~f~~~~~~~~~~~~ 275 (371)
+.|+...+..++.++..+
T Consensus 446 ~~~~~~~~~~~~~~~~~~ 463 (499)
T PRK15049 446 NGTYTIAALPIIGILLVI 463 (499)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 456666655544444333
No 348
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=37.61 E-value=59 Score=22.09 Aligned_cols=38 Identities=11% Similarity=0.280 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 233 ALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 233 ~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
-+......++++++-+ .|++.+. .+.++++.++..++.
T Consensus 11 ~l~~~il~~~~iisfi-~Gy~~q~--~~~~~~~~~~g~~~~ 48 (76)
T PF06645_consen 11 KLMQYILIISAIISFI-VGYITQS--FSYTFYIYGAGVVLT 48 (76)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHH
Confidence 3445555556666544 4444443 455666555444443
No 349
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=36.81 E-value=34 Score=24.70 Aligned_cols=53 Identities=15% Similarity=0.037 Sum_probs=40.4
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh
Q 017461 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA 189 (371)
Q Consensus 137 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 189 (371)
+....|-...+|.-.+++.+++++++.|+.-.-+-=.+|..++.+|..+..+.
T Consensus 53 ~~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 53 PAAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred CchhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 44557778888999999999999999998876666667777776665554443
No 350
>KOG3814 consensus Signaling protein van gogh/strabismus [Signal transduction mechanisms]
Probab=36.62 E-value=3.4e+02 Score=24.95 Aligned_cols=12 Identities=17% Similarity=0.357 Sum_probs=10.3
Q ss_pred ChhHHHHHHHHH
Q 017461 193 GLPFLLVVRVFM 204 (371)
Q Consensus 193 ~~~~l~~~r~l~ 204 (371)
.||++++.|++.
T Consensus 204 ayWLFYiVri~~ 215 (531)
T KOG3814|consen 204 AYWLFYIVRILD 215 (531)
T ss_pred HHHHHHhhhhhc
Confidence 689999999876
No 351
>PTZ00370 STEVOR; Provisional
Probab=36.25 E-value=93 Score=27.21 Aligned_cols=28 Identities=7% Similarity=0.027 Sum_probs=14.0
Q ss_pred cccCchhHHHHHhHHHHHHHHHHhhccc
Q 017461 255 HRFGWPSVFYSFGSLGTVWFTVWLSKAH 282 (371)
Q Consensus 255 ~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 282 (371)
..+.|-.+-++..++.+++.++.+++.+
T Consensus 253 aF~Pygiaalvllil~vvliilYiwlyr 280 (296)
T PTZ00370 253 AFYPYGIAALVLLILAVVLIILYIWLYR 280 (296)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345655555555555555444444333
No 352
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=35.33 E-value=2.6e+02 Score=23.19 Aligned_cols=25 Identities=8% Similarity=0.022 Sum_probs=12.8
Q ss_pred ccCchhHHHHHhHHHHHHHHHHhhc
Q 017461 256 RFGWPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 256 ~~gw~~~f~~~~~~~~~~~~~~~~~ 280 (371)
..+-+...++..++++++..+.+++
T Consensus 173 ~inp~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 173 VINPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred cCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555555444
No 353
>COG1288 Predicted membrane protein [Function unknown]
Probab=35.24 E-value=3.9e+02 Score=25.25 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhh------hhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHH
Q 017461 173 GFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIG------EGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTG 246 (371)
Q Consensus 173 ~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~------~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g 246 (371)
+.-.++...+.++..+....-.+.+++...+.++. .+.......+=++|... -.|..+.--++.+.++-.++.
T Consensus 358 i~dTiL~~~~~~lsgls~~~f~i~mli~~~~l~f~VpS~SG~A~ltMPImAPLaD~vg-v~RqvvV~Afq~g~G~~n~I~ 436 (481)
T COG1288 358 ILDTILNYLASLLSGLSSAVFAIGMLIFQALLNFFVPSGSGLAVLTMPIMAPLADLVG-VPRQVVVLAFQLGDGFSNIIA 436 (481)
T ss_pred hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHheEEEeCCCchhHhhchhhhhhHHhcC-CCHHHhhhhhhhcchhhheec
Confidence 34445555555555554421233444445555542 22222233344567764 356666666677777766666
Q ss_pred HH
Q 017461 247 LA 248 (371)
Q Consensus 247 ~~ 248 (371)
|-
T Consensus 437 PT 438 (481)
T COG1288 437 PT 438 (481)
T ss_pred Cc
Confidence 64
No 354
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=34.09 E-value=1.6e+02 Score=28.62 Aligned_cols=29 Identities=21% Similarity=-0.024 Sum_probs=12.5
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhHHHH
Q 017461 225 VAERSRSLALVYSGMYLGSVTGLAFSPFL 253 (371)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l 253 (371)
+++||..+...-..+.+++.++..+++.+
T Consensus 292 ~~~rg~l~t~~i~~y~~~~~iaGy~S~~~ 320 (521)
T PF02990_consen 292 PNNRGSLLTAAIILYALTSFIAGYVSARL 320 (521)
T ss_pred ccCcchHHHHHHHHHHHHhhHHHHHHHHH
Confidence 33444444444444444444444444443
No 355
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=34.05 E-value=1.2e+02 Score=18.87 Aligned_cols=34 Identities=15% Similarity=0.134 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhhh-hCCchhHHHHHHHHH
Q 017461 147 SFFWGYLLTQIAGGIWADT-VGGKAVLGFGVVWWS 180 (371)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr-~Grr~~~~~~~~~~~ 180 (371)
...++.++.....|+..|+ +|.++...+..++.+
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG 42 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLG 42 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 3445566667777888885 566555444443333
No 356
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=32.77 E-value=2.7e+02 Score=22.97 Aligned_cols=31 Identities=16% Similarity=0.318 Sum_probs=22.7
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHhHHHHhc
Q 017461 225 VAERSRSLALVYSGMYLGSVTGLAFSPFLIH 255 (371)
Q Consensus 225 ~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~ 255 (371)
.++.+++.++...+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4556778877777778888888877776644
No 357
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=32.72 E-value=4e+02 Score=24.55 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=20.6
Q ss_pred hhhhhhhhhhhhhhcCCCcchHHHHH
Q 017461 120 RVNMSIAILPMSAEFNWNPATVGLIQ 145 (371)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (371)
.-.+...+....+++|++..-.|.+.
T Consensus 238 Ae~lv~sIe~~v~~~Glp~afiGvII 263 (366)
T PRK10599 238 TKMNASPLETLLTSMNAPVAFTGFLV 263 (366)
T ss_pred HHHhHhhHHHHHHhcCCCHHHHHHHH
Confidence 44566667888899999999988775
No 358
>PF10101 DUF2339: Predicted membrane protein (DUF2339); InterPro: IPR019286 This entry, found in various hypothetical bacterial proteins, has no known function.
Probab=32.50 E-value=3.1e+02 Score=27.99 Aligned_cols=105 Identities=17% Similarity=0.154 Sum_probs=54.3
Q ss_pred hCCchhHHHHHHHHHHHHHHhh--hhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcc-hHHHHHHHHHHHHHH
Q 017461 166 VGGKAVLGFGVVWWSIATALTP--VAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAE-RSRSLALVYSGMYLG 242 (371)
Q Consensus 166 ~Grr~~~~~~~~~~~i~~~~~~--~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~g 242 (371)
+|.++..-+|.+...+|.+... -.+ +-+.=-..|+..|+..|.... ..+|+..+|+ |....++ .+.+++
T Consensus 1 ig~n~l~~iG~~~l~lG~~fl~kya~~--~g~l~p~~Rv~~g~~~g~~l~----~~g~~l~~k~~~~~~~~L--~g~G~a 72 (745)
T PF10101_consen 1 IGGNWLVRIGILVLLLGVVFLLKYAID--AGWLGPAVRVALGAALGLALL----AAGERLRRKGYRAFAQAL--AGGGIA 72 (745)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHH--cCcCCHHHHHHHHHHHHHHHH----HHHHHHHHcccchHHHHH--HHHHHH
Confidence 4667777777777766665442 223 334445568888877665433 3456664432 3333333 333333
Q ss_pred HHHHHHhH-HHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 243 SVTGLAFS-PFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 243 ~~~g~~~~-~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
........ ..+.+..+....|...+++++....+..
T Consensus 73 ~ly~t~~aa~~~y~l~~~~~af~~~~~v~~~~~~la~ 109 (745)
T PF10101_consen 73 VLYLTVFAAYHLYGLIPPPVAFALLALVTAAAVALAL 109 (745)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 33333333 3344445555666665555555444444
No 359
>PLN02601 beta-carotene hydroxylase
Probab=31.72 E-value=2.8e+02 Score=24.13 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 017461 148 FFWGYLLTQIAGGIWADTV 166 (371)
Q Consensus 148 ~~~~~~~~~~~~g~l~dr~ 166 (371)
..++..++.=++.+++-|+
T Consensus 139 l~lgtfvgMEf~Aw~aHKY 157 (303)
T PLN02601 139 LSVGAAVGMEFWARWAHRA 157 (303)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4466667777777877765
No 360
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=31.64 E-value=1.5e+02 Score=23.70 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=31.6
Q ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhccc------CchhHHHHHhHHHHHHHHHHhh
Q 017461 222 WVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRF------GWPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 222 ~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------gw~~~f~~~~~~~~~~~~~~~~ 279 (371)
.++..++.+..+.+..+.-.+...--++=+.+.... .+...+++.++++.+.++++=.
T Consensus 14 ~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~ 77 (166)
T PF05255_consen 14 WFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNS 77 (166)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhcc
Confidence 344445555555544444444333334444444322 4778888888887776665533
No 361
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=31.62 E-value=2.1e+02 Score=20.98 Aligned_cols=13 Identities=0% Similarity=0.164 Sum_probs=6.9
Q ss_pred hhhhHHHHHhccc
Q 017461 211 AMPAMNNILSKWV 223 (371)
Q Consensus 211 ~~~~~~~~i~~~~ 223 (371)
..+...++..|..
T Consensus 66 gfTTFSTf~~e~~ 78 (108)
T PRK14229 66 GLTTFSTLNDELQ 78 (108)
T ss_pred ccccHHHHHHHHH
Confidence 3455555555555
No 362
>TIGR02123 TRAP_fused TRAP transporter, 4TM/12TM fusion protein. In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria.
Probab=31.23 E-value=5.5e+02 Score=25.67 Aligned_cols=45 Identities=7% Similarity=0.031 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHH--HHh-c--ccCchhHHHHHhHHHHH
Q 017461 228 RSRSLALVYSGMYLGSVTGLAFSP--FLI-H--RFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 228 r~~~~~~~~~~~~~g~~~g~~~~~--~l~-~--~~gw~~~f~~~~~~~~~ 272 (371)
+..+.++...+...|.++=|.++. ++. + .......|....+.+++
T Consensus 245 ~~~Aaav~AaastlG~iiPPsmg~~afi~a~~~~vs~~~lf~AgiiPgll 294 (613)
T TIGR02123 245 PEFAGAVEAAASTGGQIMPPIMGAAAFIMAEFLGIPYTEIIIAAIIPALL 294 (613)
T ss_pred HHHHHHHHHHhhhcccccCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 556777777777777777666532 222 2 23455556544444444
No 363
>PRK04972 putative transporter; Provisional
Probab=31.01 E-value=4.7e+02 Score=25.73 Aligned_cols=45 Identities=16% Similarity=0.131 Sum_probs=29.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
.+.|+...+|.+|...+.-|..-+-. .|-|..+ ++.+++.++.+.
T Consensus 62 ~~~gl~lF~~~vG~~~Gp~F~~~l~~-~g~~~~~-~~~~~~~~~~~~ 106 (558)
T PRK04972 62 LNLGFMLFIFCVGVEAGPNFFSIFFR-DGKNYLM-LALVMVGSALVI 106 (558)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHH-hhHHHHH-HHHHHHHHHHHH
Confidence 35788888899999888888777665 3554443 444444444433
No 364
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=30.93 E-value=4.6e+02 Score=25.06 Aligned_cols=23 Identities=4% Similarity=-0.166 Sum_probs=12.9
Q ss_pred CchhHHHHHHHHHHHHHHhhhhh
Q 017461 168 GKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 168 rr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
.|+...-..+.+.++.++-++.+
T Consensus 340 ~~~~~~~~~~t~~~sa~WHG~~~ 362 (465)
T PLN02332 340 KKPGFFQLLATQTVSAVWHGLYP 362 (465)
T ss_pred cchhHHHHHHHHHHHHHHhcCCc
Confidence 33444444455566667766665
No 365
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=30.92 E-value=3.8e+02 Score=26.41 Aligned_cols=82 Identities=13% Similarity=0.057 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc--cChhHHHHHHHHHHhhhhchhhhHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMNN 217 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 217 (371)
+.|+...++.+|...+.-+..-+.. .|-+. ++++.++..+..++..+... ..+....++.. ++.+...++...
T Consensus 451 ~~GL~lFla~vG~~aG~~f~~~l~~-~G~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~G~---~aG~~t~t~~l~ 525 (562)
T TIGR03802 451 DLGLALFIAVVGLSAGPQAVTAIKE-MGLTL-FLLGIVVTILPLIITMLIGKYVLKYDPALLLGA---LAGARTATPALG 525 (562)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH---hhccCCCcHHHH
Confidence 4788888888888888877777744 55444 34455555444333322210 01222222222 333445667777
Q ss_pred HHhcccCCc
Q 017461 218 ILSKWVPVA 226 (371)
Q Consensus 218 ~i~~~~~~~ 226 (371)
.+.|..+.+
T Consensus 526 ~a~~~~~~~ 534 (562)
T TIGR03802 526 AVLERAGSS 534 (562)
T ss_pred HHHHhcCCC
Confidence 777776543
No 366
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=30.91 E-value=1.5e+02 Score=26.99 Aligned_cols=50 Identities=10% Similarity=-0.041 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhh
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 190 (371)
..|......+|..++..+.+++-|++|....+.++.+.+.++.+.+....
T Consensus 74 F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~ 123 (372)
T PF00854_consen 74 FNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGR 123 (372)
T ss_dssp HHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCC
Confidence 45667777788888888899999999999988888888888887776653
No 367
>COG3162 Predicted membrane protein [Function unknown]
Probab=30.59 E-value=61 Score=23.20 Aligned_cols=39 Identities=13% Similarity=0.294 Sum_probs=27.7
Q ss_pred chhhhhhcChh--HHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 017461 312 IPWGLILSKPP--VWALIVSHFCHNWGTFILLTWMPTYYNQ 350 (371)
Q Consensus 312 ~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 350 (371)
..++++.++++ .|.+.+.++..++++.....+.|.++..
T Consensus 13 p~f~eLv~kr~~Fa~~ltl~flv~Y~~filLiaf~~~~l~t 53 (102)
T COG3162 13 PRFRELVRKRRRFAVPLTLIFLVVYFGFILLIAFAPGWLAT 53 (102)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhcC
Confidence 35666665544 5677777888888888888888877754
No 368
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=30.24 E-value=2.6e+02 Score=21.60 Aligned_cols=12 Identities=8% Similarity=0.030 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHH
Q 017461 150 WGYLLTQIAGGI 161 (371)
Q Consensus 150 ~~~~~~~~~~g~ 161 (371)
+..+++..++|+
T Consensus 86 lvsv~~~~~~~~ 97 (142)
T PF11712_consen 86 LVSVFAVFFAGW 97 (142)
T ss_pred HHHHHHHHHHHH
Confidence 333344444444
No 369
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.10 E-value=1.1e+02 Score=21.72 Aligned_cols=29 Identities=10% Similarity=0.309 Sum_probs=18.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhcccCc
Q 017461 230 RSLALVYSGMYLGSVTGLAFSPFLIHRFGW 259 (371)
Q Consensus 230 ~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw 259 (371)
++=-+.+....+|+++|-+.| +..+.++|
T Consensus 23 kaEr~~q~ilti~aiVg~i~G-f~~Qqls~ 51 (101)
T KOG4112|consen 23 KAERFQQLILTIGAIVGFIYG-FAQQQLSV 51 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 444456777778888875544 55555566
No 370
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=29.89 E-value=2.3e+02 Score=21.88 Aligned_cols=28 Identities=14% Similarity=-0.010 Sum_probs=19.9
Q ss_pred HHhcccCCcchHHHHHHHHHHHHHHHHH
Q 017461 218 ILSKWVPVAERSRSLALVYSGMYLGSVT 245 (371)
Q Consensus 218 ~i~~~~~~~~r~~~~~~~~~~~~~g~~~ 245 (371)
-+.|++|+..|....+.+........-+
T Consensus 59 aLkdi~P~~~R~~i~~~~~~~~~~~k~~ 86 (137)
T PF04281_consen 59 ALKDIFPPSVRNWISSTVSTTSSAVKSL 86 (137)
T ss_pred HHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3579999999998887776555544333
No 371
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=29.73 E-value=43 Score=23.68 Aligned_cols=53 Identities=17% Similarity=0.271 Sum_probs=34.3
Q ss_pred hhhhhcC--hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCCChhhhhhhhhhe
Q 017461 314 WGLILSK--PPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSFGSKTLSETVQVC 366 (371)
Q Consensus 314 ~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~ 366 (371)
++++.+. +..+.+.+..+..++++.....+.|..+.....-+....|++..+.
T Consensus 7 f~~L~r~r~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~~G~~t~g~~~g~~ 61 (91)
T PF04341_consen 7 FQELVRRRRRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVFPGSLTLGIVLGLG 61 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCcccCCCcCHHHHHHHH
Confidence 4444443 3355677777788888888999999998764332355555554443
No 372
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=29.64 E-value=1.9e+02 Score=19.95 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=22.2
Q ss_pred HHHHHHHHhHHHHh--cccCchhHHHHHhHHHHHHHHHHh
Q 017461 241 LGSVTGLAFSPFLI--HRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 241 ~g~~~g~~~~~~l~--~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
+...+|++++..|. ...||...|++.+--+++.++++.
T Consensus 24 vsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi 63 (81)
T PF13937_consen 24 VSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILI 63 (81)
T ss_pred HHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHH
Confidence 33344455555553 246899999987655555444433
No 373
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=29.49 E-value=4.6e+02 Score=24.26 Aligned_cols=97 Identities=18% Similarity=0.128 Sum_probs=42.1
Q ss_pred hhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhh----hccChhHHHHHHHHHHh
Q 017461 131 SAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVA----AKLGLPFLLVVRVFMGI 206 (371)
Q Consensus 131 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~~r~l~G~ 206 (371)
.+.+|. ..+...+.+...+...++.++-+. +.|.|..+.-|.....++....... ....+..++.+-++.|+
T Consensus 26 ~~~~g~-~~~~~~li~at~l~sgi~Tllq~~---~~g~~lpl~~G~s~~~~~~~~~~~g~~~~~~~~~~~~~g~~~i~gi 101 (389)
T PF00860_consen 26 AAAFGL-DADTAALISATFLVSGIATLLQGL---PAGHRLPLVPGPSFAFIFAFMIVIGMAESGGYGLQAALGAVLISGI 101 (389)
T ss_dssp TS------------HHHHHHHHHHHHHHHHH---HTTT-----EEE-GGGHHHHHGGG-----HHHHHHHHHHHHHHHHH
T ss_pred hhcccc-cchhhHHHHHHHHHHHHHHHHHHh---cCCCceecccccchhhhhhhhcccccccchhhchhhhhhHHHHHHH
Confidence 344576 555567777778888888888888 7777777666555555443332222 11144555555555555
Q ss_pred hhhchhhhH-HHHHhcccCCcchHHH
Q 017461 207 GEGVAMPAM-NNILSKWVPVAERSRS 231 (371)
Q Consensus 207 ~~~~~~~~~-~~~i~~~~~~~~r~~~ 231 (371)
-.-...... ...+.+++|+.-++..
T Consensus 102 ~~~~l~~~g~~~~l~~~~pp~v~g~v 127 (389)
T PF00860_consen 102 LFILLGLTGLRKRLRRLFPPVVKGAV 127 (389)
T ss_dssp HHHHHHTT-SH-HHHHH--HHHHHHH
T ss_pred HHHHHHHhchHHHHHHHhChhheEee
Confidence 443332222 2356677776655543
No 374
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=28.12 E-value=9.1e+02 Score=27.25 Aligned_cols=19 Identities=0% Similarity=-0.141 Sum_probs=11.4
Q ss_pred cCchhHHHHHhHHHHHHHH
Q 017461 257 FGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~ 275 (371)
++|+..+++.+++.++.++
T Consensus 195 ~sw~Lalv~l~~~pl~~~~ 213 (1466)
T PTZ00265 195 KNARLTLCITCVFPLIYIC 213 (1466)
T ss_pred HhHHHHHHHHHHHHHHHHH
Confidence 5688877766555444333
No 375
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=27.73 E-value=4.1e+02 Score=23.06 Aligned_cols=73 Identities=21% Similarity=0.281 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhH
Q 017461 194 LPFLLVVRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGS 268 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~ 268 (371)
.|..++.-.+.=.-.|.-.....+++.+.+|+++|-++.=+--.+..+=-.+.-..+.++.+. |.+.+.+.+.
T Consensus 16 ~~~~l~tl~~lE~vL~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l--~~~l~~~fg~ 88 (254)
T COG0861 16 AWVALLTLILLEIVLGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL--TQPLLYIFGL 88 (254)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 333333344444445667778889999999988877665221111112222223344556554 5556666443
No 376
>PF11712 Vma12: Endoplasmic reticulum-based factor for assembly of V-ATPase; InterPro: IPR021013 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) (3.6.3.14 from EC) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins []. The yeast vacuolar proton-translocating ATPase (V-ATPase) is the best characterised member of the V-ATPase family. A total of thirteen genes are required for encoding the subunits of the enzyme complex itself and an additional three for providing factors necessary for the assembly of the whole. Vma12 is one of these latter, all three of which are localised to the endoplasmic reticulum [].
Probab=27.16 E-value=1.4e+02 Score=23.07 Aligned_cols=9 Identities=33% Similarity=0.623 Sum_probs=3.6
Q ss_pred HHHHHhhhh
Q 017461 201 RVFMGIGEG 209 (371)
Q Consensus 201 r~l~G~~~~ 209 (371)
|++.|++.|
T Consensus 112 Rvllgl~~a 120 (142)
T PF11712_consen 112 RVLLGLFGA 120 (142)
T ss_pred HHHHHHHHH
Confidence 444444333
No 377
>COG4698 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.06 E-value=67 Score=25.81 Aligned_cols=21 Identities=19% Similarity=0.374 Sum_probs=14.9
Q ss_pred chhHHHHHhHHHHHHHHHHhh
Q 017461 259 WPSVFYSFGSLGTVWFTVWLS 279 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~ 279 (371)
|+|.|++..++..+.++++..
T Consensus 11 WKw~f~iLLAln~l~~~~i~~ 31 (197)
T COG4698 11 WKWLFFILLALNTLLAVLIAL 31 (197)
T ss_pred HHHHHHHHHHHHHHHHHHhhe
Confidence 999999887776665554433
No 378
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=27.05 E-value=2.3e+02 Score=20.31 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHHHh
Q 017461 228 RSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTVWL 278 (371)
Q Consensus 228 r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 278 (371)
-|..+++...+.++|....-.+. .-|-..|.+.+++.+..+....
T Consensus 27 ~GfslS~L~~slgv~Q~~~kvia------lQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 27 MGFSLSYLTASLGVGQFFIKVIA------LQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHh
Confidence 45566666666666555544332 4577777777776555544443
No 379
>PRK10457 hypothetical protein; Provisional
Probab=27.00 E-value=2.2e+02 Score=19.72 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHhHHHHhc--ccCchhHHHHHhHHHHHHHHHH
Q 017461 238 GMYLGSVTGLAFSPFLIH--RFGWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 238 ~~~~g~~~g~~~~~~l~~--~~gw~~~f~~~~~~~~~~~~~~ 277 (371)
..-+|..+|..+...+.. ..+|.+.-++.+++..+.++.+
T Consensus 35 lGiiGA~iGg~l~~~~g~~~~~g~~~~~~i~aviGAiill~i 76 (82)
T PRK10457 35 LGIVGAVVGGWISTFFGFGKVDGFNFGSFVVAVIGAIVVLFI 76 (82)
T ss_pred HHHHHHHHHHHHHHHhCccccccccHHHHHHHHHHHHHHHHH
Confidence 334455555555544321 1234333344455544444443
No 380
>PF09911 DUF2140: Uncharacterized protein conserved in bacteria (DUF2140); InterPro: IPR018672 This family of conserved hypothetical proteins has no known function.
Probab=26.94 E-value=52 Score=26.92 Aligned_cols=20 Identities=20% Similarity=0.291 Sum_probs=13.6
Q ss_pred CchhHHHHHhHHHHHHHHHH
Q 017461 258 GWPSVFYSFGSLGTVWFTVW 277 (371)
Q Consensus 258 gw~~~f~~~~~~~~~~~~~~ 277 (371)
-|+|.|++..++.++.++.+
T Consensus 2 ~WK~aF~~Lla~~l~~~~~~ 21 (187)
T PF09911_consen 2 WWKWAFLILLALNLAFVIVV 21 (187)
T ss_pred hHHHHHHHHHHHHHHHHhhe
Confidence 39999998776655544443
No 381
>PF06808 DctM: DctM-like transporters; InterPro: IPR010656 This domain represents a conserved region located towards the N terminus of the DctM subunit of the bacterial and archaeal TRAP C4-dicarboxylate transport (Dct) system permease. In general, C4-dicarboxylate transport systems allow C4-dicarboxylates like succinate, fumarate, and malate to be taken up. TRAP C4-dicarboxylate carriers are secondary carriers that use an electrochemical H+ gradient as the driving force for transport. DctM is an integral membrane protein that is one of the constituents of TRAP carriers [, ]. Note that many family members are hypothetical proteins.
Probab=26.68 E-value=4.6e+02 Score=24.63 Aligned_cols=58 Identities=9% Similarity=-0.018 Sum_probs=32.0
Q ss_pred HHHHHhcccC-CcchHHHHHHHHHHHHHHHHHHHHhHHHHh----cccCchhHHHHHhHHHHH
Q 017461 215 MNNILSKWVP-VAERSRSLALVYSGMYLGSVTGLAFSPFLI----HRFGWPSVFYSFGSLGTV 272 (371)
Q Consensus 215 ~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~----~~~gw~~~f~~~~~~~~~ 272 (371)
....+.|.-. .-+|..+.++...+..+|..+-|.+.-.+. ........|....+.+++
T Consensus 118 G~i~iP~M~k~GY~~~~A~av~aasgtlG~liPPsi~~ii~~~a~~~~si~~lf~agiiPgll 180 (416)
T PF06808_consen 118 GSITIPEMKKAGYPPEFAAAVIAASGTLGQLIPPSIGMIIYGMAVTGVSIGDLFIAGIIPGLL 180 (416)
T ss_pred HHHHHHHHHHcCCCHHHhHHHHhhccccchhcchHHHHHHHHHhhccchHHHHHHHHHHHHHH
Confidence 3334444432 224667788888888888888776654432 223344455443333333
No 382
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=26.61 E-value=2.6e+02 Score=21.01 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=15.0
Q ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHh
Q 017461 135 NWNPATVGLIQSSFFWGYLLTQIAGGIW 162 (371)
Q Consensus 135 ~~~~~~~~~~~s~~~~~~~~~~~~~g~l 162 (371)
|++.++.++...+..+...+.+++..++
T Consensus 20 GlT~~El~~~a~~~~~~g~~~gl~la~~ 47 (121)
T PF11990_consen 20 GLTADELGLAAGVGFVAGLVVGLPLALL 47 (121)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666555555444444444333
No 383
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=26.59 E-value=3.5e+02 Score=22.02 Aligned_cols=55 Identities=13% Similarity=-0.034 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHh
Q 017461 147 SFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGI 206 (371)
Q Consensus 147 ~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~ 206 (371)
...+...+.+++.-.+..|.++|.++.+-.++.++..++.+ ..|...+..++.|+
T Consensus 36 ~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G-----~~~~~~~~~iv~gl 90 (186)
T PF09605_consen 36 MPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMG-----HGWPMLIVCIVGGL 90 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHH
Confidence 34566777888888899999999998877777666554432 23455555555554
No 384
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=26.44 E-value=1.8e+02 Score=18.80 Aligned_cols=37 Identities=8% Similarity=0.133 Sum_probs=21.1
Q ss_pred hcChhHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCC
Q 017461 318 LSKPPVWALIVSHFCHNWGTFILLTWMPTYYNQVSSF 354 (371)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 354 (371)
++|++.....+..+.+.........|+-.|+...-|.
T Consensus 2 f~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi 38 (73)
T PF13073_consen 2 FTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGI 38 (73)
T ss_pred CccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCC
Confidence 5566666666555555555544555666666664443
No 385
>PF04550 Phage_holin_2: Phage holin family 2 ; InterPro: IPR007633 This entry represents the Bacteriophage P2, GpY, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=26.40 E-value=2.3e+02 Score=19.86 Aligned_cols=31 Identities=19% Similarity=0.065 Sum_probs=20.3
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhccc
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKWV 223 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 223 (371)
-.+=++++|.+.|-+.+....+....+.|.-
T Consensus 30 it~RL~iGR~ilGs~~S~~Aga~Li~~Pdl~ 60 (89)
T PF04550_consen 30 ITLRLFIGRVILGSAVSVVAGAALIQFPDLP 60 (89)
T ss_pred CchhHHhHHHHHhhHHHHHHHHHHhcCCCCC
Confidence 3567888999988887765554444444444
No 386
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=26.12 E-value=3e+02 Score=20.93 Aligned_cols=12 Identities=0% Similarity=0.122 Sum_probs=5.5
Q ss_pred hhhHHHHHhccc
Q 017461 212 MPAMNNILSKWV 223 (371)
Q Consensus 212 ~~~~~~~i~~~~ 223 (371)
.+.-.++..|..
T Consensus 80 fTTFSTf~~E~~ 91 (128)
T PRK14199 80 LTTFSTFSYETI 91 (128)
T ss_pred cccHHHHHHHHH
Confidence 344444444544
No 387
>PF07556 DUF1538: Protein of unknown function (DUF1538); InterPro: IPR011435 This family of protenis of unknown function contains several conserved glycines and phenylalanines.
Probab=25.92 E-value=4e+02 Score=22.37 Aligned_cols=70 Identities=20% Similarity=0.336 Sum_probs=41.0
Q ss_pred ChhHHHHHHHHHHhhhhchhhhHHHHHhcc--cCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHH
Q 017461 193 GLPFLLVVRVFMGIGEGVAMPAMNNILSKW--VPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYS 265 (371)
Q Consensus 193 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~--~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~ 265 (371)
+.|.++...++.|+......|....+..+. ..+.+-.+..=++..+.++|..++--+...+ +||+..+++
T Consensus 61 ~~~~l~~~gf~lGf~~t~AEPal~vL~~qve~vs~G~i~~~~l~~~vaiGVg~~i~lg~lRIi---~g~~l~~~l 132 (212)
T PF07556_consen 61 SLWLLLLFGFVLGFLVTIAEPALRVLADQVEEVSGGSIPKSVLILAVAIGVGIFIALGMLRII---FGIPLWYFL 132 (212)
T ss_pred CcEEeHHHHHHHHHHHHhhCcHHHHHHHHHHHhCcCCcchhHHHHHHHHHHHHHHHHHHHHHH---hCCcHHHHH
Confidence 788889999999999998888877764333 2222223333344444555544443333333 366554444
No 388
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.78 E-value=2.2e+02 Score=25.03 Aligned_cols=117 Identities=12% Similarity=0.191 Sum_probs=56.1
Q ss_pred HHHHHHHHHHhhhhhhhhhhhh-hhhhcCCCcchHHHHHHHHHHHHHHHHHHHH-HhhhhhCCchhHHHHHHHHHHHHHH
Q 017461 108 LCFSAFLLCNMDRVNMSIAILP-MSAEFNWNPATVGLIQSSFFWGYLLTQIAGG-IWADTVGGKAVLGFGVVWWSIATAL 185 (371)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~~~~~~~~~~i~~~~ 185 (371)
-+.+.+++.-+...+-...++. +.++++.+.+...++-.+..+....-+.+-. .--++-..|.....|.+++..++..
T Consensus 205 QiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYsaGgiiwifcga~ 284 (412)
T KOG4830|consen 205 QIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYSAGGIIWIFCGAV 284 (412)
T ss_pred HHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeeecccHHHHHhhhh
Confidence 3334444443333333344444 3455665555555544433333332222211 1111222233344555555555444
Q ss_pred hhhhhccCh-hHHHHHHHHHHhhhhchhhhHHHHHhcccCC
Q 017461 186 TPVAAKLGL-PFLLVVRVFMGIGEGVAMPAMNNILSKWVPV 225 (371)
Q Consensus 186 ~~~~~~~~~-~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 225 (371)
..+-+. ++ ..+++..++.|++.+........+.++....
T Consensus 285 ilLlpr-~i~symyAisvfIGIAnAimlvtslsitavli~~ 324 (412)
T KOG4830|consen 285 ILLLPR-GIKSYMYAISVFIGIANAIMLVTSLSITAVLINK 324 (412)
T ss_pred eeeccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 433331 22 2345557888999998887777777766643
No 389
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=25.09 E-value=3.3e+02 Score=21.20 Aligned_cols=14 Identities=21% Similarity=0.176 Sum_probs=5.3
Q ss_pred HHHHHHHHhhhhhC
Q 017461 154 LTQIAGGIWADTVG 167 (371)
Q Consensus 154 ~~~~~~g~l~dr~G 167 (371)
++-++...++|+.+
T Consensus 87 ~~l~v~~~La~~L~ 100 (150)
T COG3086 87 VGLFLGAILAQYLF 100 (150)
T ss_pred HHHHHHHHHHHHHh
Confidence 33333333344433
No 390
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=24.74 E-value=1.5e+02 Score=26.94 Aligned_cols=73 Identities=16% Similarity=0.213 Sum_probs=49.6
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHH-hhhhh-ccChhHHHHHHHHHHhhhh
Q 017461 137 NPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATAL-TPVAA-KLGLPFLLVVRVFMGIGEG 209 (371)
Q Consensus 137 ~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~-~~~~~-~~~~~~l~~~r~l~G~~~~ 209 (371)
.-+.++..+..+.++..+.+.+.|.++.++||-+.+..+.+.-..-... ....+ ..+.|.+.+.-.+.|+|-+
T Consensus 308 Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li~~~~~w~~~~~~~~i~y~~aalwgv~d~ 382 (390)
T KOG3097|consen 308 GVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLITILFFWAPNPQDSWIFYVAAALWGVGDA 382 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHhcccCCCCceEEEeehhhcCccHH
Confidence 4567899999999999999999999999999999888877654332222 11111 1145555555555555544
No 391
>PRK14200 camphor resistance protein CrcB; Provisional
Probab=24.62 E-value=3.2e+02 Score=20.76 Aligned_cols=12 Identities=8% Similarity=0.122 Sum_probs=5.6
Q ss_pred hhhHHHHHhccc
Q 017461 212 MPAMNNILSKWV 223 (371)
Q Consensus 212 ~~~~~~~i~~~~ 223 (371)
.+.-.++..|..
T Consensus 80 fTTFSTf~~E~~ 91 (127)
T PRK14200 80 LTTFSTFSMDNV 91 (127)
T ss_pred chhHHHHHHHHH
Confidence 344445544444
No 392
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=24.60 E-value=7.3e+02 Score=24.99 Aligned_cols=21 Identities=0% Similarity=-0.034 Sum_probs=9.2
Q ss_pred HHHHhhhhhCCchhHHHHHHH
Q 017461 158 AGGIWADTVGGKAVLGFGVVW 178 (371)
Q Consensus 158 ~~g~l~dr~Grr~~~~~~~~~ 178 (371)
-...+..+..||-..+...+.
T Consensus 389 ~~~~~l~~~s~rs~i~~~g~~ 409 (700)
T COG1480 389 SALVLLRKMSRRSDILKSGLF 409 (700)
T ss_pred HHHHHHhhhhhhHHHHHHHHH
Confidence 333444455555444433333
No 393
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=24.55 E-value=2e+02 Score=18.92 Aligned_cols=30 Identities=10% Similarity=-0.099 Sum_probs=14.4
Q ss_pred chhHHHHHhHHHHHHHHHHhhcccCCCCCC
Q 017461 259 WPSVFYSFGSLGTVWFTVWLSKAHSSPAED 288 (371)
Q Consensus 259 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (371)
|-.++.+...+.++.+-++-..+||..+..
T Consensus 30 ~Aav~~~~~~~~l~~~~~iG~~LPe~s~~a 59 (67)
T PF11511_consen 30 YAAVFFLGLWFLLVALYFIGLLLPERSRQA 59 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSTTTCSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCchhcccC
Confidence 444444444444444444455667765543
No 394
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=24.49 E-value=3.7e+02 Score=21.55 Aligned_cols=80 Identities=13% Similarity=0.024 Sum_probs=45.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhc--cChhHHHHHHHHHHhhhhchhhhHH
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAK--LGLPFLLVVRVFMGIGEGVAMPAMN 216 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~ 216 (371)
.+.|+..-++.+|...+.-+..-+.+. |-| .+.++.++..++.+....... ..+....+...+ ..+...+...
T Consensus 56 ~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~-~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~---aGa~T~tp~L 130 (169)
T PF06826_consen 56 RQLGLALFLAAVGLSAGPGFFSSLKRG-GLK-LLLLGVIITLVPLLIALVIGRYLFKLNPGIAAGIL---AGALTSTPAL 130 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH---HccccCcHHH
Confidence 456788888888888888887777666 544 445555555555544333320 022222222222 2233556777
Q ss_pred HHHhccc
Q 017461 217 NILSKWV 223 (371)
Q Consensus 217 ~~i~~~~ 223 (371)
....|..
T Consensus 131 ~~A~~~~ 137 (169)
T PF06826_consen 131 AAAQEAI 137 (169)
T ss_pred HHHHHhh
Confidence 7777773
No 395
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=24.37 E-value=1.5e+02 Score=20.66 Aligned_cols=21 Identities=0% Similarity=-0.102 Sum_probs=13.1
Q ss_pred hhHHHHHhHHHHHHHHHHhhc
Q 017461 260 PSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 260 ~~~f~~~~~~~~~~~~~~~~~ 280 (371)
|+-.++.|++-+++++.+++.
T Consensus 23 RYGLf~GAIFQliCilAiI~~ 43 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIILP 43 (85)
T ss_pred HHHHHHHHHHHHHHHHheeee
Confidence 566666777766665555543
No 396
>PRK04972 putative transporter; Provisional
Probab=23.88 E-value=7.1e+02 Score=24.54 Aligned_cols=89 Identities=13% Similarity=0.026 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhcc--ChhHHHHHHHHHHhhhhchhhhHHH
Q 017461 140 TVGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKL--GLPFLLVVRVFMGIGEGVAMPAMNN 217 (371)
Q Consensus 140 ~~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~ 217 (371)
+.|+...+..+|...+.-+..-+.. .|-+.. .++.++..+..+...+.... ..... +.+-.++.+...+....
T Consensus 446 ~~GL~lFla~vGl~aG~~f~~~~~~-~g~~~~-~~g~~~t~~~~~~~~~~~~~~~k~~~~---~~~G~~aG~~t~~~~l~ 520 (558)
T PRK04972 446 EFGLMVFMAGVGLSAGSGINNGLGA-VGGQML-IAGLIVSLVPVVICFLFGAYVLRMNRA---LLFGAIMGARTCAPAME 520 (558)
T ss_pred HHhHHHHHHHHHHhhhHHHHHHHHH-hhHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHH---HHHHHHhCCCCCcHHHH
Confidence 4666666777777777666666644 444433 34444444433332222100 11111 22222334445677788
Q ss_pred HHhcccCCcchHHHHH
Q 017461 218 ILSKWVPVAERSRSLA 233 (371)
Q Consensus 218 ~i~~~~~~~~r~~~~~ 233 (371)
++.|....+.-....+
T Consensus 521 ~~~~~~~~~~~~~gYa 536 (558)
T PRK04972 521 IISDTARSNIPALGYA 536 (558)
T ss_pred HHHhhcCCCCcccccH
Confidence 8888875544333333
No 397
>PRK11715 inner membrane protein; Provisional
Probab=23.72 E-value=6.3e+02 Score=23.94 Aligned_cols=68 Identities=12% Similarity=0.165 Sum_probs=37.9
Q ss_pred HHHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHHH
Q 017461 200 VRVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFTV 276 (371)
Q Consensus 200 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~~ 276 (371)
=..+.|++...++.+..++ .++-|...+..-++...-..++-.+...+ -+||....+.+++..+-.++
T Consensus 333 QYlLVGlAl~lFYLLLLSl------SEHigF~~AYliAa~a~v~li~~Y~~~vl---~~~k~g~~~~~~L~~LYg~L 400 (436)
T PRK11715 333 QYLLVGLALVLFYLLLLSL------SEHIGFTLAYLIAALACVLLIGFYLSAVL---RSWKRGLLFAAALAALYGVL 400 (436)
T ss_pred HHHHHHHHHHHHHHHHHHH------HhhhchHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHHHHHHH
Confidence 3467777777666655444 35556666665555554445555444444 34776666655555444433
No 398
>PF03773 DUF318: Predicted permease; InterPro: IPR005524 This family of predicted integral membrane proteins.
Probab=23.58 E-value=5.3e+02 Score=22.96 Aligned_cols=21 Identities=10% Similarity=0.188 Sum_probs=10.9
Q ss_pred HHHHHhHHHHhcccCchhHHH
Q 017461 244 VTGLAFSPFLIHRFGWPSVFY 264 (371)
Q Consensus 244 ~~g~~~~~~l~~~~gw~~~f~ 264 (371)
.+.|.........+||+.+.+
T Consensus 95 ~~n~~~~~~~~~~lg~~~~~~ 115 (307)
T PF03773_consen 95 LLNPIVLLLTWAALGWKFTLI 115 (307)
T ss_pred HhhHHHHHHHHHHhCcHHHHH
Confidence 444444444444567776554
No 399
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=23.57 E-value=6.4e+02 Score=23.89 Aligned_cols=66 Identities=14% Similarity=0.151 Sum_probs=33.0
Q ss_pred HHHHHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHHHH
Q 017461 201 RVFMGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVWFT 275 (371)
Q Consensus 201 r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~~~ 275 (371)
..+.|++...++.+..++ .++-+...+..-++...-..++-.+.+.+ -+||....+.+++..+-.+
T Consensus 328 Y~LVGlAl~lFYlLLLSl------SEhi~F~~AYliAa~a~i~Li~~Y~~~vl---~~~k~~~~~~~~L~~LY~~ 393 (430)
T PF06123_consen 328 YLLVGLALVLFYLLLLSL------SEHIGFNLAYLIAALACIGLISLYLSSVL---KSWKRGLIFAGLLAALYGF 393 (430)
T ss_pred HHHHHHHHHHHHHHHHHH------HhhhchHHHHHHHHHHHHHHHHHHHHHHH---hcchHHHHHHHHHHHHHHH
Confidence 456666666655554443 34445555555444444444444444433 2466665555555444333
No 400
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=23.39 E-value=27 Score=31.15 Aligned_cols=25 Identities=16% Similarity=0.287 Sum_probs=0.0
Q ss_pred HHHHhhhhchhhhHHHHHhcccCCcc
Q 017461 202 VFMGIGEGVAMPAMNNILSKWVPVAE 227 (371)
Q Consensus 202 ~l~G~~~~~~~~~~~~~i~~~~~~~~ 227 (371)
++.|++.+........+.+. +|++.
T Consensus 5 ~~~~~~~~~~q~s~~glas~-~p~~y 29 (309)
T PF01733_consen 5 ALIGFANAVLQSSLFGLASL-FPPKY 29 (309)
T ss_dssp --------------------------
T ss_pred EEEHhhhHHHhccHHHHHhc-CCHHH
Confidence 45666667666666666664 55544
No 401
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=23.17 E-value=6.3e+02 Score=23.69 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=23.9
Q ss_pred HHhhhhchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhH
Q 017461 204 MGIGEGVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFS 250 (371)
Q Consensus 204 ~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 250 (371)
.|+-.|........++ +...-+.---+.++...+..+|.++.+++.
T Consensus 299 iG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 299 IGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 3433343333333343 445445555566676666666666655544
No 402
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=22.95 E-value=3.1e+02 Score=20.09 Aligned_cols=69 Identities=13% Similarity=0.049 Sum_probs=40.4
Q ss_pred HHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHHHHhhhhchhhhHHHHHhcc
Q 017461 153 LLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVFMGIGEGVAMPAMNNILSKW 222 (371)
Q Consensus 153 ~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 222 (371)
=+..-..=+.+|.|.|+...++..+.+.++..+.+.+-. +...=.+--...|+|..+.......+..|-
T Consensus 14 EV~~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk-~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~ 82 (106)
T COG2076 14 EVVGTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALK-TIPLGVAYAIWTGIGIVGTALVGVLLFGES 82 (106)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHh-hCchHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 344445567788888888888777777777777766652 233333334555566554444444443333
No 403
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=22.84 E-value=78 Score=20.19 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=17.2
Q ss_pred cCchhHHHHHhHHHHHHHHHHhhc
Q 017461 257 FGWPSVFYSFGSLGTVWFTVWLSK 280 (371)
Q Consensus 257 ~gw~~~f~~~~~~~~~~~~~~~~~ 280 (371)
-|||...++.++++++.+.+.-..
T Consensus 3 rg~r~~~~~ggfVg~iG~a~Ypi~ 26 (58)
T PF15061_consen 3 RGWRYALFVGGFVGLIGAALYPIY 26 (58)
T ss_pred ccccchhhHHHHHHHHHHHHhhhh
Confidence 379998888888877766554433
No 404
>KOG1307 consensus K+-dependent Ca2+/Na+ exchanger NCKX1 and related proteins [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=22.53 E-value=2.6e+02 Score=26.56 Aligned_cols=39 Identities=10% Similarity=0.088 Sum_probs=19.0
Q ss_pred hhhhhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 017461 127 ILPMSAEFNWNPATVGLIQSSFFWGYLLTQIAGGIWADTVG 167 (371)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~l~dr~G 167 (371)
...+-+.+|+++...|+..- +.|..+=-++...+.-|-|
T Consensus 447 a~~iGeT~gIp~eIMGLTiL--AAGTSIPDlitSvIVARKG 485 (588)
T KOG1307|consen 447 ANIIGETLGIPDEIMGLTIL--AAGTSIPDLITSVIVARKG 485 (588)
T ss_pred HHHcccccCCCHHHhhhhhh--hcCCchHHhhHhhhhcccc
Confidence 34455667777766665432 2333333334444444433
No 405
>COG1289 Predicted membrane protein [Function unknown]
Probab=22.44 E-value=6.1e+02 Score=25.61 Aligned_cols=21 Identities=19% Similarity=0.108 Sum_probs=11.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhh
Q 017461 170 AVLGFGVVWWSIATALTPVAA 190 (371)
Q Consensus 170 ~~~~~~~~~~~i~~~~~~~~~ 190 (371)
+-++++.+.+.++.++....-
T Consensus 60 ~rli~tlig~~~~~~~~~~~~ 80 (674)
T COG1289 60 KRLIGTLIGFAVALLLVALLA 80 (674)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 345555556666665554444
No 406
>KOG2946 consensus Uncharacterized conserved protein [Function unknown]
Probab=22.10 E-value=4.8e+02 Score=21.96 Aligned_cols=29 Identities=3% Similarity=0.279 Sum_probs=17.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVG 167 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G 167 (371)
...+++.++..+|..+..+-.-.+..+++
T Consensus 124 ~vFs~vf~i~wfG~~vvtln~kLLGgnIs 152 (234)
T KOG2946|consen 124 SVFAVVFAILWFGAVVVTLNIKLLGGNIS 152 (234)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 55666666666666666665555544444
No 407
>PF13829 DUF4191: Domain of unknown function (DUF4191)
Probab=22.09 E-value=2.8e+02 Score=23.41 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHHHHHH
Q 017461 233 ALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSLGTVW 273 (371)
Q Consensus 233 ~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~~~~~ 273 (371)
.++..+..++.++..++.|++.. +.|.+.+.+++..++
T Consensus 28 ~~~ml~a~l~~~~v~v~ig~l~~---~~~~~~i~gi~~g~l 65 (224)
T PF13829_consen 28 PWLMLGAFLGPIAVFVLIGLLFG---SWWYWLIIGILLGLL 65 (224)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHH
Confidence 34444444444444444455544 335555555544433
No 408
>PF08566 Pam17: Mitochondrial import protein Pam17; InterPro: IPR013875 The presequence translocase-associated motor (PAM) drives the completion of preprotein translocation into the mitochondrial matrix. The Pam17 subunit is required for formation of a stable complex between cochaperones Pam16 and Pam18 and promotes the association of Pam16-Pam18 with the presequence translocase []. Mitochondria lacking Pam17 are selectively impaired in the import of matrix proteins [].
Probab=21.77 E-value=2.6e+02 Score=22.52 Aligned_cols=33 Identities=18% Similarity=0.196 Sum_probs=14.6
Q ss_pred hhhhcCCCcchH-H-HHHHHHHHHHHHHHHHHHHh
Q 017461 130 MSAEFNWNPATV-G-LIQSSFFWGYLLTQIAGGIW 162 (371)
Q Consensus 130 ~~~~~~~~~~~~-~-~~~s~~~~~~~~~~~~~g~l 162 (371)
.+.-+|+++-.+ | -..+...+|.++|..++..+
T Consensus 68 ~~~I~GlDP~~~~g~~t~a~g~lG~L~GP~~G~~v 102 (173)
T PF08566_consen 68 TQQIMGLDPFMVYGLATLACGALGWLVGPSLGNQV 102 (173)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 444567776443 1 22223344444444444333
No 409
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=21.71 E-value=4.4e+02 Score=21.42 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=31.5
Q ss_pred hchhhhHHHHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccCchhHHHHHhHH
Q 017461 209 GVAMPAMNNILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWPSVFYSFGSL 269 (371)
Q Consensus 209 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~~~f~~~~~~ 269 (371)
++-.....+++.+..|+++|.++.-+--.+..+--.+.-.++.++.+. |.|...+.|+.
T Consensus 11 s~DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 344555667777788887776665332222222334444455566664 35555555444
No 410
>PRK14206 camphor resistance protein CrcB; Provisional
Probab=21.58 E-value=3.6e+02 Score=20.36 Aligned_cols=12 Identities=0% Similarity=0.066 Sum_probs=6.0
Q ss_pred hhhHHHHHhccc
Q 017461 212 MPAMNNILSKWV 223 (371)
Q Consensus 212 ~~~~~~~i~~~~ 223 (371)
.+.-.++..|.+
T Consensus 78 fTTFSTf~~e~~ 89 (127)
T PRK14206 78 FTTFSSFSLQTL 89 (127)
T ss_pred cccHHHHHHHHH
Confidence 444455555554
No 411
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=21.56 E-value=2.6e+02 Score=21.02 Aligned_cols=34 Identities=24% Similarity=0.150 Sum_probs=15.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHhcccCch
Q 017461 227 ERSRSLALVYSGMYLGSVTGLAFSPFLIHRFGWP 260 (371)
Q Consensus 227 ~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~gw~ 260 (371)
.||.-..=...+..+|.++|-+++-.+.-..||-
T Consensus 18 ~rGlT~~El~~~a~~~~~~g~~~gl~la~~~g~~ 51 (121)
T PF11990_consen 18 FRGLTADELGLAAGVGFVAGLVVGLPLALLTGWW 51 (121)
T ss_pred ecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444333344444455555544444443335554
No 412
>PRK14232 camphor resistance protein CrcB; Provisional
Probab=21.35 E-value=3.6e+02 Score=20.20 Aligned_cols=12 Identities=0% Similarity=0.077 Sum_probs=6.4
Q ss_pred hhhHHHHHhccc
Q 017461 212 MPAMNNILSKWV 223 (371)
Q Consensus 212 ~~~~~~~i~~~~ 223 (371)
.+.-.++..|.+
T Consensus 71 fTTFSTf~~e~~ 82 (120)
T PRK14232 71 YTTFSTFMYEGF 82 (120)
T ss_pred chhHHHHHHHHH
Confidence 445555555555
No 413
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=21.02 E-value=6.8e+02 Score=23.96 Aligned_cols=29 Identities=14% Similarity=0.164 Sum_probs=14.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhhC
Q 017461 139 ATVGLIQSSFFWGYLLTQIAGGIWADTVG 167 (371)
Q Consensus 139 ~~~~~~~s~~~~~~~~~~~~~g~l~dr~G 167 (371)
-.+-|...++.++.+++..+..+...|.|
T Consensus 21 ~~I~~YGl~ialGil~a~~l~~r~~kr~g 49 (460)
T PRK13108 21 LPVRAYAVCVITGIIVALLIGDRRLTARG 49 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444444444555555555555555544
No 414
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=20.83 E-value=4.2e+02 Score=20.78 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHhhhhhccChhHHHHHHHH
Q 017461 146 SSFFWGYLLTQIAGGIWADTVGGKAVLGFGVVWWSIATALTPVAAKLGLPFLLVVRVF 203 (371)
Q Consensus 146 s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~r~l 203 (371)
..+.++..+.+...-.+..|+.||+.=.++..+ +-+.++ |..+++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~H--N~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAH--NIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHH--HHHHHHHHHHH
Confidence 456677777888888888888776655544332 224555 66666665554
No 415
>COG1284 Uncharacterized conserved protein [Function unknown]
Probab=20.66 E-value=3.7e+02 Score=23.83 Aligned_cols=47 Identities=19% Similarity=0.156 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHhhhhchhh-----hHHHHHhcccCCcchHHHHHHHHHHHHH
Q 017461 194 LPFLLVVRVFMGIGEGVAMP-----AMNNILSKWVPVAERSRSLALVYSGMYL 241 (371)
Q Consensus 194 ~~~l~~~r~l~G~~~~~~~~-----~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 241 (371)
+..-+.+.++.|+|.|..+- ...-+++.+. .++.+.-.|-.....+.
T Consensus 114 ll~aifgG~l~G~G~glv~r~ggStGGtdIlA~~l-~kk~g~~iG~~ll~vd~ 165 (289)
T COG1284 114 LLAALFGGLLLGIGLGLVFRHGGSTGGTDILALIL-NKKFGISVGKILLLVDG 165 (289)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHH-HHHcCCChhhhHHHHHH
Confidence 34455668888888776432 2334555555 34445555555444444
No 416
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism]
Probab=20.34 E-value=4.9e+02 Score=24.17 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhCCchhHHHH-HHHHHHHHHH---hhhhhccChhHHHHHHHHHHhhhhchhhhHH
Q 017461 141 VGLIQSSFFWGYLLTQIAGGIWADTVGGKAVLGFG-VVWWSIATAL---TPVAAKLGLPFLLVVRVFMGIGEGVAMPAMN 216 (371)
Q Consensus 141 ~~~~~s~~~~~~~~~~~~~g~l~dr~Grr~~~~~~-~~~~~i~~~~---~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~ 216 (371)
+|-+.....+..+++++=.=-+.|--.+--+++.. .+.+++.++. -.+-. ||+.-..+---+|.|.|.. |.+.
T Consensus 281 ig~vsL~lflamALmSlkLweL~~l~lpl~viL~vQ~i~m~lfa~fvtfr~mG~--~YdAaV~~~G~~G~gLGAT-PtAi 357 (404)
T COG0786 281 IGNVSLSLFLAMALMSLKLWELADLALPLLVILAVQTIVMALFAIFVTFRLMGK--NYDAAVLAAGHCGFGLGAT-PTAI 357 (404)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHhCc--chhHHHHhcccccCccCCc-HHHH
Confidence 44455555666666666555566655544333322 2222222211 12234 7776666666667776653 3333
Q ss_pred HHHhcccCCcchHHHHHHHHHHHHHHHHHHHHhHHHHhcccC
Q 017461 217 NILSKWVPVAERSRSLALVYSGMYLGSVTGLAFSPFLIHRFG 258 (371)
Q Consensus 217 ~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~g 258 (371)
+-+.... +|.|. ..-..++-|.+++++.+..+
T Consensus 358 anM~av~-~k~g~---------S~kAf~ivPiVGAffid~in 389 (404)
T COG0786 358 ANMQAVT-EKFGP---------SHKAFIVVPIVGAFFIDIIN 389 (404)
T ss_pred Hhhhcch-hhcCC---------CceeeEEeehHHHHHHHHHH
Confidence 2222222 22222 11223556777777766443
No 417
>PF02659 DUF204: Domain of unknown function DUF; InterPro: IPR003810 Uncharacterised domain in proteins of unknown function.
Probab=20.11 E-value=2.6e+02 Score=18.09 Aligned_cols=26 Identities=19% Similarity=0.153 Sum_probs=11.8
Q ss_pred HHHHHHHHhhhhhCCchhHHHHHHHH
Q 017461 154 LTQIAGGIWADTVGGKAVLGFGVVWW 179 (371)
Q Consensus 154 ~~~~~~g~l~dr~Grr~~~~~~~~~~ 179 (371)
++..++.++.++++++.-.+.+.++.
T Consensus 39 ~G~~~G~~~~~~~~~~~~~igg~iLi 64 (67)
T PF02659_consen 39 LGLLLGRRLGRFIGSYAEWIGGIILI 64 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444555555554444444443
Done!