Query 017465
Match_columns 371
No_of_seqs 302 out of 1776
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 14:52:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017465.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017465hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 6.3E-31 2.1E-35 254.2 16.4 174 78-324 6-179 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 4E-28 1.4E-32 237.5 13.2 170 80-321 24-193 (337)
3 2bon_A Lipid kinase; DAG kinas 99.9 5.2E-27 1.8E-31 229.3 12.1 172 79-323 28-200 (332)
4 2an1_A Putative kinase; struct 98.8 1.4E-08 4.6E-13 96.9 10.6 124 80-232 5-131 (292)
5 1yt5_A Inorganic polyphosphate 98.7 2.6E-08 8.9E-13 93.6 7.5 106 82-232 2-108 (258)
6 1u0t_A Inorganic polyphosphate 98.6 8.7E-08 3E-12 92.3 10.2 129 80-232 4-143 (307)
7 2i2c_A Probable inorganic poly 98.6 1.2E-07 4E-12 89.8 10.6 104 81-232 1-105 (272)
8 3afo_A NADH kinase POS5; alpha 97.5 0.00028 9.7E-09 70.0 9.5 127 78-232 39-183 (388)
9 1z0s_A Probable inorganic poly 95.9 0.031 1.1E-06 52.8 9.3 93 81-215 30-122 (278)
10 3pfn_A NAD kinase; structural 94.4 0.079 2.7E-06 51.9 7.4 70 146-232 107-176 (365)
11 4grd_A N5-CAIR mutase, phospho 80.0 18 0.00062 31.4 10.8 74 82-168 14-89 (173)
12 3jzd_A Iron-containing alcohol 79.8 4 0.00014 39.4 7.5 86 80-186 36-121 (358)
13 3hl0_A Maleylacetate reductase 79.6 4.8 0.00016 38.8 7.9 86 80-186 34-119 (353)
14 1xmp_A PURE, phosphoribosylami 77.0 10 0.00035 32.9 8.4 79 79-168 9-88 (170)
15 3rg8_A Phosphoribosylaminoimid 72.4 21 0.00073 30.6 9.1 64 97-168 15-80 (159)
16 1o2d_A Alcohol dehydrogenase, 72.0 29 0.00099 33.3 11.3 100 81-192 41-156 (371)
17 1o4v_A Phosphoribosylaminoimid 71.3 29 0.00099 30.4 9.9 77 81-168 13-90 (183)
18 3uhj_A Probable glycerol dehyd 71.0 7.4 0.00025 38.0 6.8 85 81-186 53-138 (387)
19 3oow_A Phosphoribosylaminoimid 69.1 39 0.0013 29.1 10.1 64 97-168 18-82 (166)
20 1sg6_A Pentafunctional AROM po 69.0 9.6 0.00033 37.1 7.2 101 80-193 36-148 (393)
21 3lp6_A Phosphoribosylaminoimid 68.1 24 0.00083 30.7 8.6 75 82-168 9-84 (174)
22 3kuu_A Phosphoribosylaminoimid 68.1 32 0.0011 29.9 9.4 77 80-168 11-89 (174)
23 2gru_A 2-deoxy-scyllo-inosose 67.7 6 0.00021 38.2 5.3 95 80-186 34-128 (368)
24 3iv7_A Alcohol dehydrogenase I 65.6 11 0.00036 36.5 6.6 84 80-186 37-120 (364)
25 2ywx_A Phosphoribosylaminoimid 63.3 29 0.001 29.6 8.1 61 97-168 12-73 (157)
26 3trh_A Phosphoribosylaminoimid 63.1 39 0.0013 29.2 8.9 63 97-168 19-83 (169)
27 1oj7_A Hypothetical oxidoreduc 63.0 14 0.00047 36.1 6.9 101 81-193 51-168 (408)
28 3ors_A N5-carboxyaminoimidazol 62.7 40 0.0014 29.0 8.9 64 97-168 16-80 (163)
29 3okf_A 3-dehydroquinate syntha 62.6 15 0.0005 36.1 7.0 96 79-186 61-157 (390)
30 4b4k_A N5-carboxyaminoimidazol 60.0 45 0.0015 29.1 8.8 78 78-168 19-99 (181)
31 3ce9_A Glycerol dehydrogenase; 57.1 36 0.0012 32.2 8.6 85 81-186 35-120 (354)
32 1u11_A PURE (N5-carboxyaminoim 55.9 58 0.002 28.4 8.9 77 80-168 21-98 (182)
33 3qbe_A 3-dehydroquinate syntha 52.3 18 0.00062 35.1 5.6 93 81-186 44-137 (368)
34 1jq5_A Glycerol dehydrogenase; 52.2 26 0.00088 33.5 6.7 86 81-186 32-118 (370)
35 3clh_A 3-dehydroquinate syntha 51.9 18 0.00062 34.4 5.5 94 80-186 26-119 (343)
36 1ta9_A Glycerol dehydrogenase; 50.9 41 0.0014 33.4 8.1 86 80-186 91-177 (450)
37 3bfj_A 1,3-propanediol oxidore 49.7 92 0.0031 29.8 10.3 103 80-193 33-151 (387)
38 3s4e_A Dual specificity protei 48.5 7 0.00024 31.9 1.7 35 14-48 71-106 (144)
39 2j16_A SDP-1, tyrosine-protein 48.2 7.1 0.00024 33.9 1.8 34 15-48 108-142 (182)
40 1ujn_A Dehydroquinate synthase 47.4 25 0.00085 33.5 5.7 90 80-186 28-118 (348)
41 3emu_A Leucine rich repeat and 46.7 8.5 0.00029 32.3 2.0 34 15-48 78-112 (161)
42 3ezz_A Dual specificity protei 46.7 9.2 0.00031 31.1 2.2 35 14-48 71-106 (144)
43 1pfk_A Phosphofructokinase; tr 45.8 41 0.0014 31.9 6.9 40 146-193 93-132 (320)
44 3ox4_A Alcohol dehydrogenase 2 45.5 71 0.0024 30.7 8.7 100 80-192 31-146 (383)
45 1vlj_A NADH-dependent butanol 44.5 82 0.0028 30.5 9.0 101 81-193 44-160 (407)
46 3hbm_A UDP-sugar hydrolase; PS 43.1 52 0.0018 30.4 7.1 29 146-186 224-252 (282)
47 2nt2_A Protein phosphatase sli 42.1 10 0.00035 30.9 1.8 33 16-48 73-106 (145)
48 2h31_A Multifunctional protein 40.9 97 0.0033 30.6 8.8 75 81-168 266-343 (425)
49 1zzw_A Dual specificity protei 38.9 12 0.00042 30.5 1.8 32 16-47 75-107 (149)
50 1zxx_A 6-phosphofructokinase; 38.4 42 0.0014 31.8 5.7 39 147-193 93-131 (319)
51 2hcm_A Dual specificity protei 37.5 13 0.00046 30.9 1.8 34 15-48 80-114 (164)
52 1wrm_A Dual specificity phosph 36.8 13 0.00044 31.1 1.6 34 15-48 74-108 (165)
53 1rrm_A Lactaldehyde reductase; 36.5 87 0.003 29.9 7.7 99 80-191 31-147 (386)
54 3rgo_A Protein-tyrosine phosph 36.2 14 0.00047 30.2 1.6 34 15-48 80-114 (157)
55 2esb_A Dual specificity protei 34.7 16 0.00055 31.4 1.9 34 15-48 88-122 (188)
56 3f81_A Dual specificity protei 34.4 16 0.00056 30.8 1.9 34 15-48 105-140 (183)
57 2hig_A 6-phospho-1-fructokinas 34.2 91 0.0031 31.4 7.6 44 147-193 189-233 (487)
58 2x9a_A Attachment protein G3P; 33.8 9.7 0.00033 27.5 0.2 12 149-160 39-50 (65)
59 2r0b_A Serine/threonine/tyrosi 33.5 18 0.0006 29.6 1.9 33 15-47 81-114 (154)
60 2g6z_A Dual specificity protei 33.4 19 0.00064 32.0 2.2 34 15-48 74-108 (211)
61 2iz6_A Molybdenum cofactor car 33.3 48 0.0016 28.6 4.7 49 127-187 30-79 (176)
62 3cm3_A Late protein H1, dual s 32.9 17 0.00057 30.8 1.7 34 15-48 99-133 (176)
63 1t35_A Hypothetical protein YV 32.0 49 0.0017 28.8 4.7 48 128-187 19-67 (191)
64 1xah_A Sadhqs, 3-dehydroquinat 31.9 25 0.00086 33.5 2.9 90 81-186 32-124 (354)
65 3gw6_A Endo-N-acetylneuraminid 31.6 15 0.0005 34.3 1.1 14 148-161 46-59 (275)
66 2hxp_A Dual specificity protei 31.0 19 0.00066 29.7 1.8 33 16-48 77-110 (155)
67 1ydh_A AT5G11950; structural g 30.8 48 0.0016 29.6 4.4 33 147-185 40-73 (216)
68 2y96_A Dual specificity phosph 30.8 19 0.00065 31.9 1.8 33 16-48 130-164 (219)
69 2oud_A Dual specificity protei 30.4 19 0.00065 30.5 1.6 32 16-47 79-111 (177)
70 3sbx_A Putative uncharacterize 30.3 49 0.0017 29.0 4.3 34 148-187 44-78 (189)
71 2e0t_A Dual specificity phosph 30.2 20 0.00068 29.2 1.7 33 16-48 76-110 (151)
72 1yz4_A DUSP15, dual specificit 29.6 24 0.00081 29.1 2.1 34 15-48 75-109 (160)
73 2img_A Dual specificity protei 28.8 23 0.00077 28.5 1.8 33 16-48 81-114 (151)
74 4a3s_A 6-phosphofructokinase; 28.0 37 0.0013 32.2 3.3 39 147-193 93-131 (319)
75 3qua_A Putative uncharacterize 26.5 59 0.002 28.6 4.2 34 148-187 53-87 (199)
76 2a33_A Hypothetical protein; s 26.4 66 0.0023 28.6 4.5 34 148-187 45-79 (215)
77 2wgp_A Dual specificity protei 26.3 27 0.00093 30.0 1.9 34 15-48 94-128 (190)
78 4erc_A Dual specificity protei 26.1 24 0.00082 28.4 1.4 33 15-47 79-112 (150)
79 2pq5_A Dual specificity protei 26.0 27 0.00093 30.4 1.9 32 17-48 123-156 (205)
80 1rcu_A Conserved hypothetical 25.7 72 0.0025 28.0 4.6 34 147-186 57-90 (195)
81 2f48_A Diphosphate--fructose-6 24.3 88 0.003 32.0 5.5 45 147-193 166-210 (555)
82 1twd_A Copper homeostasis prot 23.3 76 0.0026 29.2 4.4 37 147-187 141-177 (256)
83 4fyk_A Deoxyribonucleoside 5'- 22.6 2.9E+02 0.01 23.1 7.6 105 80-195 1-112 (152)
84 3opy_A 6-phosphofructo-1-kinas 20.8 1.7E+02 0.0058 32.0 7.1 46 147-193 688-733 (989)
85 2q05_A Late protein H1, dual s 20.8 40 0.0014 29.0 1.9 33 15-47 116-149 (195)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=99.97 E-value=6.3e-31 Score=254.20 Aligned_cols=174 Identities=21% Similarity=0.197 Sum_probs=124.5
Q ss_pred CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 78 ~~~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
.++++++||+||+||++++.+.++.++..|.+.+ +++.. +.|++.+|++++++++. .+.+.||++|||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~-~~~~~-----~~t~~~~~a~~~~~~~~------~~~d~vv~~GGD 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAF-PDLHI-----LHTKEQGDATKYCQEFA------SKVDLIIVFGGD 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHC-SEEEE-----EECCSTTHHHHHHHHHT------TTCSEEEEEECH
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcC-CeEEE-----EEccCcchHHHHHHHhh------cCCCEEEEEccc
Confidence 4588999999999999999889999999998764 34433 45678899999987642 367899999999
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEEecCCC
Q 017465 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (371)
Q Consensus 158 GTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v~~~~~ 237 (371)
|||+||+|+|... ..++|||+||+||||||||+||+ |.++. ++++.+.+|+.+++|+|++.
T Consensus 74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~----~~~~~----~a~~~i~~g~~~~iDlg~v~------ 134 (304)
T 3s40_A 74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGV----PQNIA----EAAKLITKEHVKPVDVAKAN------ 134 (304)
T ss_dssp HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHH----HHHHHHTTCCEEEEEEEEET------
T ss_pred hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCC----CccHH----HHHHHHHhCCeEEEEEEEEC------
Confidence 9999999999853 36799999999999999999999 44544 44556788999999998641
Q ss_pred CccCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhhhccccccCccccccCCccchhhHHHHh
Q 017465 238 EVVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (371)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~F~Ny~siG~DA~Va~~f~~~R~~~P~~~~~rl~nkl~Y~~~~~ 317 (371)
+++|+|++|+||||+|+++++..++ +..+++.|...++
T Consensus 135 ----------------------------------~~~F~~~~~~G~da~v~~~~~~~~k--------~~~G~~~Y~~~~l 172 (304)
T 3s40_A 135 ----------------------------------GQHFLNFWGIGLVSEVSNNIDAEEK--------AKLGKIGYYLSTI 172 (304)
T ss_dssp ----------------------------------TEEESSEEEEC--------------------------CHHHHTTTC
T ss_pred ----------------------------------CEEEEEEEeehHHHHHHHhcCHHHh--------hcCCchHHHHHHH
Confidence 3599999999999999999886442 2349999999988
Q ss_pred hhccccc
Q 017465 318 TQGWFLT 324 (371)
Q Consensus 318 ~~~~~~~ 324 (371)
++++...
T Consensus 173 ~~l~~~~ 179 (304)
T 3s40_A 173 RTVKNAE 179 (304)
T ss_dssp ------C
T ss_pred HHHhhcC
Confidence 8765443
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=99.95 E-value=4e-28 Score=237.51 Aligned_cols=170 Identities=20% Similarity=0.188 Sum_probs=126.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
|++++||+||.||++++.+.++.++..|.+.+ +++.. ..|.+.+++.++++++. ..+.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g-~~~~~-----~~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAG-YETSA-----YATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTT-EEEEE-----EECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcC-CeEEE-----EEecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 56899999999999988888999999998754 44443 34456678888876532 245689999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEEecCCCCc
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v~~~~~~~ 239 (371)
|+||+++|.+. ..++|||+||+||+|||||+||+ |.++. ++++.+.+|+.+.+|+|++.
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~----~~~~~----~al~~i~~g~~~~iD~g~v~-------- 151 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHI----PNDIM----GALDVIIEGHSTKVDIGKMN-------- 151 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHH----HHHHHHHHTCEEEEEEEEET--------
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCC----CCCHH----HHHHHHHcCCcEEEEEEEEC--------
Confidence 99999999642 36799999999999999999999 44444 34556778999999998641
Q ss_pred cCCCCCCCCCccccccccccccCCCCcccccccceEEEEeecchhHHHHhhhccccccCccccccCCccchhhHHHHhhh
Q 017465 240 VDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQ 319 (371)
Q Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~F~Ny~siG~DA~Va~~f~~~R~~~P~~~~~rl~nkl~Y~~~~~~~ 319 (371)
+++|+|++|+||||+|+++++..++ .++ +++.|...++.+
T Consensus 152 --------------------------------~r~fl~~~~~G~~a~v~~~~~~~~k-------~~~-G~~~Y~~~~l~~ 191 (337)
T 2qv7_A 152 --------------------------------NRYFINLAAGGQLTQVSYETPSKLK-------SIV-GPFAYYIKGFEM 191 (337)
T ss_dssp --------------------------------TEEESSEEEEECBCC---------------------CGGGSCCCTTTT
T ss_pred --------------------------------CEEEEEEeeecccHHHHHHhhHHHH-------hcc-ChHHHHHHHHHH
Confidence 3589999999999999999876542 233 889998888777
Q ss_pred cc
Q 017465 320 GW 321 (371)
Q Consensus 320 ~~ 321 (371)
.+
T Consensus 192 l~ 193 (337)
T 2qv7_A 192 LP 193 (337)
T ss_dssp GG
T ss_pred HH
Confidence 54
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=99.94 E-value=5.2e-27 Score=229.34 Aligned_cols=172 Identities=20% Similarity=0.240 Sum_probs=123.1
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
.+++++||+||.||++ +.++.+.+.|...+ +++.. ..|.+.+++.++++++. ..+.+.||++||||
T Consensus 28 ~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g-~~~~~-----~~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGDG 93 (332)
T 2bon_A 28 EFPASLLILNGKSTDN---LPLREAIMLLREEG-MTIHV-----RVTWEKGDAARYVEEAR-----KFGVATVIAGGGDG 93 (332)
T ss_dssp --CCEEEEECSSSTTC---HHHHHHHHHHHTTT-CCEEE-----EECCSTTHHHHHHHHHH-----HHTCSEEEEEESHH
T ss_pred hcceEEEEECCCCCCC---chHHHHHHHHHHcC-CcEEE-----EEecCcchHHHHHHHHH-----hcCCCEEEEEccch
Confidence 3688999999999976 46677888887654 33333 23445677877765432 23568999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEEecCCCC
Q 017465 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (371)
Q Consensus 159 TV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v~~~~~~ 238 (371)
||+||+++|.+... ..++|||+||+||+|||||+||| |.++.+ +++.+.+|+.+++|+|++.
T Consensus 94 Tl~~v~~~l~~~~~---~~~~plgiiP~Gt~N~fa~~l~i----~~~~~~----al~~i~~g~~~~iDlg~v~------- 155 (332)
T 2bon_A 94 TINEVSTALIQCEG---DDIPALGILPLGTANDFATSVGI----PEALDK----ALKLAIAGDAIAIDMAQVN------- 155 (332)
T ss_dssp HHHHHHHHHHHCCS---SCCCEEEEEECSSSCHHHHHTTC----CSSHHH----HHHHHHHSEEEEEEEEEET-------
T ss_pred HHHHHHHHHhhccc---CCCCeEEEecCcCHHHHHHhcCC----CCCHHH----HHHHHHcCCeEEeeEEEEC-------
Confidence 99999999985321 36789999999999999999999 444443 4556778999999998641
Q ss_pred ccCCCCCCCCCccccccccccccCCCCcccccccc-eEEEEeecchhHHHHhhhccccccCccccccCCccchhhHHHHh
Q 017465 239 VVDPPHSLKPTEDCALDQGLQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSC 317 (371)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~-~F~Ny~siG~DA~Va~~f~~~R~~~P~~~~~rl~nkl~Y~~~~~ 317 (371)
++ +|+|++|+||||+|+++++..++ .++ +++.|...++
T Consensus 156 ---------------------------------~r~~fl~~~~~G~da~v~~~~~~~~k-------~~~-G~~~Y~~~~l 194 (332)
T 2bon_A 156 ---------------------------------KQTCFINMATGGFGTRITTETPEKLK-------AAL-GSVSYIIHGL 194 (332)
T ss_dssp ---------------------------------TSCEESSEEEEEEEEEC-----------------CC-HHHHHHHHHT
T ss_pred ---------------------------------CceEEEEEEeECccHHHHHHhhHHhH-------hcc-cHHHHHHHHH
Confidence 23 89999999999999988765432 234 8999999988
Q ss_pred hhcccc
Q 017465 318 TQGWFL 323 (371)
Q Consensus 318 ~~~~~~ 323 (371)
+.++..
T Consensus 195 ~~l~~~ 200 (332)
T 2bon_A 195 MRMDTL 200 (332)
T ss_dssp SCEEEE
T ss_pred HHHhhC
Confidence 776543
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=98.82 E-value=1.4e-08 Score=96.85 Aligned_cols=124 Identities=15% Similarity=0.080 Sum_probs=72.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHh-ccch--hhhccCCCcEEEEEcC
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE-LGDF--CAKDTRQKMRIVVAGG 156 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~-~~~~--~a~~~~~~~~Ivv~GG 156 (371)
|+++++|+||.++. ..+..+.+.+.|...+ +++..... .+..+.. .... ......+.|.||++||
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~g-~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~D~vi~~GG 72 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQG-YEVIVEQQ---------IAHELQLKNVPTGTLAEIGQQADLAVVVGG 72 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHTT-CEEEEEHH---------HHHHTTCSSCCEECHHHHHHHCSEEEECSC
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHCC-CEEEEecc---------hhhhcccccccccchhhcccCCCEEEEEcC
Confidence 68899999998753 3467778888887653 44433110 0111000 0000 0000124689999999
Q ss_pred chHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEE
Q 017465 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (371)
Q Consensus 157 DGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v 232 (371)
|||++++++.+.+. ..|.+|| |+||.|+|++ ++ |.+ ++++++.+.+|+..--++..+.+
T Consensus 73 DGT~l~a~~~~~~~------~~P~lGI-~~Gt~gfla~-~~-----~~~----~~~al~~i~~g~~~~~~r~~l~~ 131 (292)
T 2an1_A 73 DGNMLGAARTLARY------DINVIGI-NRGNLGFLTD-LD-----PDN----ALQQLSDVLEGRYISEKRFLLEA 131 (292)
T ss_dssp HHHHHHHHHHHTTS------SCEEEEB-CSSSCCSSCC-BC-----TTS----HHHHHHHHHTTCEEEEEEEEEEE
T ss_pred cHHHHHHHHHhhcC------CCCEEEE-ECCCcccCCc-CC-----HHH----HHHHHHHHHcCCCEEEEeEEEEE
Confidence 99999999999752 2344776 8999888886 34 333 44556667788876556666655
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=98.68 E-value=2.6e-08 Score=93.62 Aligned_cols=106 Identities=22% Similarity=0.260 Sum_probs=71.2
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHH
Q 017465 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (371)
Q Consensus 82 ~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~ 161 (371)
++++|+||.||.+ +.++.+.+.+.|. .+++. + . + +. ...+.|.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~--------~-~--~-----~~------~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHE---VIEFG--------E-A--N-----AP------GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEE--------E-S--S-----SC------SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhc---CCcee--------c-c--c-----cc------ccCCCCEEEEEeCcHHHH
Confidence 6899999999976 6667777766654 33321 1 1 1 10 124569999999999999
Q ss_pred HHHHHHhhcccCCCCCCCc-EEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEE
Q 017465 162 WVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (371)
Q Consensus 162 ~Vln~L~~~~~~~~~~~~p-igIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v 232 (371)
++++.+.+ .+| +|| ++||.+.|+ .+. |.+ ++++++.+.+|+..--++..+.+
T Consensus 56 ~~a~~~~~--------~~PilGI-n~G~~Gfl~-~~~-----~~~----~~~al~~i~~g~~~i~~r~~l~~ 108 (258)
T 1yt5_A 56 KAAKKAAD--------GTPMVGF-KAGRLGFLT-SYT-----LDE----IDRFLEDLRNWNFREETRWFIQI 108 (258)
T ss_dssp HHHTTBCT--------TCEEEEE-ESSSCCSSC-CBC-----GGG----HHHHHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHhCC--------CCCEEEE-ECCCCCccC-cCC-----HHH----HHHHHHHHHcCCceEEEEEEEEE
Confidence 99988752 345 777 599996666 454 333 45556667788876555655554
No 6
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=98.65 E-value=8.7e-08 Score=92.26 Aligned_cols=129 Identities=15% Similarity=0.180 Sum_probs=74.1
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccc-ee---ecch------h-HHHHHHhccchhhhccCCC
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHE-FV---QYGL------A-CLEKLAELGDFCAKDTRQK 148 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~-~~---t~~~------~-~a~~la~~~~~~a~~~~~~ 148 (371)
++++++|+||.++. ..+..+.+.+.|..++ +++....... .+ .... + +...+.+.. ....+.
T Consensus 4 m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~ 76 (307)
T 1u0t_A 4 HRSVLLVVHTGRDE--ATETARRVEKVLGDNK-IALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQ----HAADGC 76 (307)
T ss_dssp -CEEEEEESSSGGG--GSHHHHHHHHHHHTTT-CEEEEEC---------------------------------------C
T ss_pred CCEEEEEEeCCCHH--HHHHHHHHHHHHHHCC-CEEEEecchhhhhhccccccccccccccccccccccc----ccccCC
Confidence 67899999999863 3467788888887654 3443321110 00 0000 0 011111100 012456
Q ss_pred cEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeee
Q 017465 149 MRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSW 228 (371)
Q Consensus 149 ~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w 228 (371)
|.||++|||||+.++++.+... ..|.+|| ++||.|.|+. +. |.+ ++++++.+.+|+...-++.
T Consensus 77 d~vi~~GGDGT~l~a~~~~~~~------~~pvlgi-~~G~~gfl~~-~~-----~~~----~~~~~~~i~~g~~~~~~r~ 139 (307)
T 1u0t_A 77 ELVLVLGGDGTFLRAAELARNA------SIPVLGV-NLGRIGFLAE-AE-----AEA----IDAVLEHVVAQDYRVEDRL 139 (307)
T ss_dssp CCEEEEECHHHHHHHHHHHHHH------TCCEEEE-ECSSCCSSCS-EE-----GGG----HHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHhccC------CCCEEEE-eCCCCccCcc-cC-----HHH----HHHHHHHHHcCCcEEEEEE
Confidence 8999999999999999999762 2344675 8999999985 42 333 4455666777877666665
Q ss_pred eEEE
Q 017465 229 HAVI 232 (371)
Q Consensus 229 ~i~v 232 (371)
.+.+
T Consensus 140 ~l~~ 143 (307)
T 1u0t_A 140 TLDV 143 (307)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 5544
No 7
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=98.63 E-value=1.2e-07 Score=89.82 Aligned_cols=104 Identities=12% Similarity=0.121 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV 160 (371)
+++.+|+||+ .++.+..+.+.+.|...+ +++. ..+.|.||++|||||+
T Consensus 1 mki~ii~n~~---~~~~~~~~~l~~~l~~~g-~~v~----------------------------~~~~D~vv~lGGDGT~ 48 (272)
T 2i2c_A 1 MKYMITSKGD---EKSDLLRLNMIAGFGEYD-MEYD----------------------------DVEPEIVISIGGDGTF 48 (272)
T ss_dssp CEEEEEECCS---HHHHHHHHHHHHHHTTSS-CEEC----------------------------SSSCSEEEEEESHHHH
T ss_pred CEEEEEECCC---HHHHHHHHHHHHHHHHCC-CEeC----------------------------CCCCCEEEEEcCcHHH
Confidence 3688999963 245567788888886543 3320 1346899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCc-EEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEeeeeeEEE
Q 017465 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVI 232 (371)
Q Consensus 161 ~~Vln~L~~~~~~~~~~~~p-igIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~iD~w~i~v 232 (371)
..+++.+... ..++| +|| |+|| |+|...+. |.+ ++++++.+.+|+...-++..+.+
T Consensus 49 l~aa~~~~~~-----~~~~PilGI-n~G~-lgfl~~~~-----~~~----~~~~l~~l~~g~~~i~~r~~L~~ 105 (272)
T 2i2c_A 49 LSAFHQYEER-----LDEIAFIGI-HTGH-LGFYADWR-----PAE----ADKLVKLLAKGEYQKVSYPLLKT 105 (272)
T ss_dssp HHHHHHTGGG-----TTTCEEEEE-ESSS-CCSSCCBC-----GGG----HHHHHHHHHTTCCEEEEEEEEEE
T ss_pred HHHHHHHhhc-----CCCCCEEEE-eCCC-CCcCCcCC-----HHH----HHHHHHHHHcCCCEEEEEEEEEE
Confidence 9999998642 12567 666 9999 66777775 333 45566677788766555555544
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.00028 Score=69.97 Aligned_cols=127 Identities=17% Similarity=0.115 Sum_probs=73.5
Q ss_pred CCCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcC-eeEEEeecccceeecchhHHHHHHhcc----------c------h
Q 017465 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELG----------D------F 140 (371)
Q Consensus 78 ~~~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~-v~dl~~~~p~~~~t~~~~~a~~la~~~----------~------~ 140 (371)
.++++++||.||.. ....+....+.+.|..+. .+++... . ..+..+.... . .
T Consensus 39 ~~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve-------~--~~a~~l~~~~~~~~~~~~~~~~~~~~~~ 107 (388)
T 3afo_A 39 NPLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQ-------P--DVAEEISQDFKSPLENDPNRPHILYTGP 107 (388)
T ss_dssp SCCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECC-------H--HHHHHHHTTCCSCGGGCTTSCEEEEECC
T ss_pred CCCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEe-------C--chhhhhhhhccccccccccccccccccc
Confidence 34789999999874 344566777777776541 2343221 0 1112221110 0 0
Q ss_pred hhhccCCCcEEEEEcCchHHHHHHHHHhhcccCCCCCC-CcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHc
Q 017465 141 CAKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPV-PPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASA 219 (371)
Q Consensus 141 ~a~~~~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~-~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~ 219 (371)
......+.|.||+.|||||+..++..+... .. |-||| ++||.+-|+. +.. . .++++++.+.+
T Consensus 108 ~~~~~~~~DlVIvlGGDGTlL~aa~~~~~~------~vpPiLGI-N~G~lGFLt~-~~~-----~----~~~~al~~il~ 170 (388)
T 3afo_A 108 EQDIVNRTDLLVTLGGDGTILHGVSMFGNT------QVPPVLAF-ALGTLGFLSP-FDF-----K----EHKKVFQEVIS 170 (388)
T ss_dssp HHHHHHHCSEEEEEESHHHHHHHHHTTTTS------CCCCEEEE-ECSSCCSSCC-EEG-----G----GHHHHHHHHHT
T ss_pred hhhcccCCCEEEEEeCcHHHHHHHHHhccc------CCCeEEEE-ECCCcccCCc-CCh-----H----HHHHHHHHHhc
Confidence 000012458999999999999999877541 22 33565 9998755543 332 2 45566777888
Q ss_pred CCeeEeeeeeEEE
Q 017465 220 GPICRLDSWHAVI 232 (371)
Q Consensus 220 g~~~~iD~w~i~v 232 (371)
|+.....+-.+.+
T Consensus 171 g~~~~~~r~~L~~ 183 (388)
T 3afo_A 171 SRAKCLHRTRLEC 183 (388)
T ss_dssp TCCEEEEECCEEE
T ss_pred CCceEEEeeEEEE
Confidence 8876655555554
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.86 E-value=0.031 Score=52.85 Aligned_cols=93 Identities=19% Similarity=0.302 Sum_probs=53.5
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV 160 (371)
+++.++.|+..- .+.+.+.|..++ +++...... + ....+.|.||+.|||||+
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~g-~~v~~~~~~-------------~-------~~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRLE-VEVELFNQP-------------S-------EELENFDFIVSVGGDGTI 81 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHTT-CEEEEESSC-------------C-------GGGGGSSEEEEEECHHHH
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHCC-CEEEEcccc-------------c-------cccCCCCEEEEECCCHHH
Confidence 359999997654 456666676643 344321100 0 012356899999999999
Q ss_pred HHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHH
Q 017465 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQ 215 (371)
Q Consensus 161 ~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~ 215 (371)
-.++..+.. . +||--|.+||-+=|+. +. +.+..++++++++
T Consensus 82 L~aa~~~~~-------~-~PilGIN~G~lGFLt~-~~-----~~~~~~~l~~l~~ 122 (278)
T 1z0s_A 82 LRILQKLKR-------C-PPIFGINTGRVGLLTH-AS-----PENFEVELKKAVE 122 (278)
T ss_dssp HHHHTTCSS-------C-CCEEEEECSSSCTTCC-BB-----TTBCHHHHHHHHH
T ss_pred HHHHHHhCC-------C-CcEEEECCCCCccccc-cC-----HHHHHHHHHHHHh
Confidence 888755432 3 6776678885443332 11 3344455555443
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=94.37 E-value=0.079 Score=51.92 Aligned_cols=70 Identities=26% Similarity=0.382 Sum_probs=45.5
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhhhCCCCCCCCcHHHHHHHHHHHHHcCCeeEe
Q 017465 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRL 225 (371)
Q Consensus 146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArsLG~g~~~p~~~~~al~~~l~~i~~g~~~~i 225 (371)
...|.||+.|||||+-.++..+.+ ..+||-=|-+| +||+=..+..+ .++++|+.+.+|...--
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G-------~LGFLt~~~~~---~~~~~l~~vl~g~~~v~ 169 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG-------SLGFLTPFSFE---NFQSQVTQVIEGNAAVV 169 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS-------SCTTTCCEEST---THHHHHHHHHHSCCBEE
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC-------CCccceeecHH---HHHHHHHHHHcCCCeEE
Confidence 356899999999999988876543 45665545555 46664433322 45566777778876655
Q ss_pred eeeeEEE
Q 017465 226 DSWHAVI 232 (371)
Q Consensus 226 D~w~i~v 232 (371)
.+-.+.+
T Consensus 170 ~R~~L~~ 176 (365)
T 3pfn_A 170 LRSRLKV 176 (365)
T ss_dssp EECCEEE
T ss_pred EEeeEEE
Confidence 5555444
No 11
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=80.04 E-value=18 Score=31.44 Aligned_cols=74 Identities=19% Similarity=0.180 Sum_probs=49.3
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchH
Q 017465 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (371)
Q Consensus 82 ~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~GGDGT 159 (371)
.+.||.=..| -..+.+.....|...++ ||+.+...+. .+....++++++. .+. .-.|.++||.|-
T Consensus 14 ~V~IimGS~S----D~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~aah 80 (173)
T 4grd_A 14 LVGVLMGSSS----DWDVMKHAVAILQEFGVPYEAKVVSAHR----MPDEMFDYAEKAR-----ERGLRAIIAGAGGAAH 80 (173)
T ss_dssp SEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHT-----TTTCSEEEEEEESSCC
T ss_pred eEEEEeCcHh----HHHHHHHHHHHHHHcCCCEEEEEEcccc----CHHHHHHHHHHHH-----hcCCeEEEEecccccc
Confidence 4666653332 23466677777777666 8888876543 5667777876542 122 246777899999
Q ss_pred HHHHHHHHh
Q 017465 160 VGWVLGSVG 168 (371)
Q Consensus 160 V~~Vln~L~ 168 (371)
+--++.++.
T Consensus 81 LpgvvA~~t 89 (173)
T 4grd_A 81 LPGMLAAKT 89 (173)
T ss_dssp HHHHHHHHC
T ss_pred chhhheecC
Confidence 999999885
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=79.78 E-value=4 Score=39.43 Aligned_cols=86 Identities=15% Similarity=0.151 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
.++++|+..+.. ..+.+++...|....+.-+....|.+ .....++.++.+. ..+.|.||++|| |+
T Consensus 36 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 100 (358)
T 3jzd_A 36 AKRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHV----PIESARDATARAR-----EAGADCAVAVGG-GS 100 (358)
T ss_dssp CSCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HHTCSEEEEEES-HH
T ss_pred CCeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCC----CHHHHHHHHHHhh-----ccCCCEEEEeCC-cH
Confidence 367888876542 23567788888764322222222222 1233444443221 235689999999 99
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+... ..+|+..||.
T Consensus 101 viD~aK~iA~~------~~~p~i~IPT 121 (358)
T 3jzd_A 101 TTGLGKAIALE------TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 99998887653 4578888886
No 13
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=79.57 E-value=4.8 Score=38.81 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
.++++|+..+.. ..+.+++...|....+.-+....|.+ .....+++++.+. ..+.|.||++|| |+
T Consensus 34 ~~r~liVtd~~~-----~~~~~~v~~~L~~~~~~v~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 98 (353)
T 3hl0_A 34 LSRALVLSTPQQ-----KGDAEALASRLGRLAAGVFSEAAMHT----PVEVTKTAVEAYR-----AAGADCVVSLGG-GS 98 (353)
T ss_dssp CCCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHHH-----HTTCSEEEEEES-HH
T ss_pred CCEEEEEecCch-----hhHHHHHHHHHhhCCcEEecCcCCCC----cHHHHHHHHHHHh-----ccCCCEEEEeCC-cH
Confidence 367888876542 23567888888764321122222222 1233444443221 245689999999 99
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+... ..+|+..||.
T Consensus 99 ~iD~aK~iA~~------~~~p~i~IPT 119 (353)
T 3hl0_A 99 TTGLGKAIALR------TDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHH------HCCEEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 99998887653 4578888886
No 14
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=77.03 E-value=10 Score=32.92 Aligned_cols=79 Identities=16% Similarity=0.148 Sum_probs=50.1
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
-++|...|+ .|+..-....+.....|...++ ||+.+...+ +.+....++++++.. ..-.-.|.++||.
T Consensus 9 ~~~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~a 77 (170)
T 1xmp_A 9 HMKSLVGVI---MGSTSDWETMKYACDILDELNIPYEKKVVSAH----RTPDYMFEYAETARE----RGLKVIIAGAGGA 77 (170)
T ss_dssp --CCSEEEE---ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTTT----TTCCEEEEEEESS
T ss_pred cCCCcEEEE---ECcHHHHHHHHHHHHHHHHcCCCEEEEEEecc----CCHHHHHHHHHHHHh----CCCcEEEEECCch
Confidence 356655555 3433334566777777777665 888887543 356777888765421 1123567788999
Q ss_pred hHHHHHHHHHh
Q 017465 158 GTVGWVLGSVG 168 (371)
Q Consensus 158 GTV~~Vln~L~ 168 (371)
+-+--++.++.
T Consensus 78 a~LpgvvA~~t 88 (170)
T 1xmp_A 78 AHLPGMVAAKT 88 (170)
T ss_dssp CCHHHHHHTTC
T ss_pred hhhHHHHHhcc
Confidence 99999987764
No 15
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=72.40 E-value=21 Score=30.57 Aligned_cols=64 Identities=9% Similarity=0.084 Sum_probs=44.2
Q ss_pred hhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccC-CCcEEEEEcCchHHHHHHHHHh
Q 017465 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTR-QKMRIVVAGGDGTVGWVLGSVG 168 (371)
Q Consensus 97 ~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~-~~~~Ivv~GGDGTV~~Vln~L~ 168 (371)
..+.+.....|...++ ||+.+...+ +.+....++++++.+ .. -.-.|.++||.+-+--++.++.
T Consensus 15 ~~v~~~a~~~l~~~gi~~ev~V~saH----R~p~~~~~~~~~a~~----~~~~~ViIa~AG~aa~LpgvvA~~t 80 (159)
T 3rg8_A 15 MGHAEKIASELKTFGIEYAIRIGSAH----KTAEHVVSMLKEYEA----LDRPKLYITIAGRSNALSGFVDGFV 80 (159)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHHHT----SCSCEEEEEECCSSCCHHHHHHHHS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHhhh----cCCCcEEEEECCchhhhHHHHHhcc
Confidence 3466777777777666 888887654 356777888765421 11 2346777899999999999885
No 16
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=71.96 E-value=29 Score=33.28 Aligned_cols=100 Identities=22% Similarity=0.236 Sum_probs=55.9
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe--eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV--FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v--~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
++++|+..+.+-... .+.+++...|...+. ..+....|.+ .....+++++.+. ..+.|.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 688999887543222 256677777755432 1222223322 2234555544321 235688999988 7
Q ss_pred HHHHHHHHHhhcccC------------CCCCCCcEEEeeC--CCccch
Q 017465 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDL 192 (371)
Q Consensus 159 TV~~Vln~L~~~~~~------------~~~~~~pigIIPl--GTGNDl 192 (371)
++..+...+...... .....+|+..||. |||-..
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~ 156 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEV 156 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhh
Confidence 888887776543110 0015689999997 555443
No 17
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=71.32 E-value=29 Score=30.40 Aligned_cols=77 Identities=17% Similarity=0.229 Sum_probs=50.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
-|+..|+ .|+..-....+.....|...++ ||+.+...+ +.+....++++++.+ ..-.-.|.++||.+-
T Consensus 13 ~~~V~Ii---mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGII---MGSDSDLPVMKQAAEILEEFGIDYEITIVSAH----RTPDRMFEYAKNAEE----RGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEE---ESCGGGHHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSCC
T ss_pred CCeEEEE---eccHHHHHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEecCcccc
Confidence 3555555 3443334566777777777665 888887553 356778888876431 112356778899999
Q ss_pred HHHHHHHHh
Q 017465 160 VGWVLGSVG 168 (371)
Q Consensus 160 V~~Vln~L~ 168 (371)
+--++.++.
T Consensus 82 LpgvvA~~t 90 (183)
T 1o4v_A 82 LPGMVASIT 90 (183)
T ss_dssp HHHHHHHHC
T ss_pred cHHHHHhcc
Confidence 999998885
No 18
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=70.98 E-value=7.4 Score=37.97 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=48.3
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
++++|+..+..- +.+.+++...|.. ++ +.+....+.+ .....+++++.+. ..+.|.||++|| |+
T Consensus 53 ~r~liVtd~~~~----~~~~~~v~~~L~~-g~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLF----DALSERIGKSCGD-SLDIRFERFGGEC----CTSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTH----HHHHHHC-------CCEEEEEECCSSC----SHHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHH----HHHHHHHHHHHHc-CCCeEEEEcCCCC----CHHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 788888876553 2366777777766 42 2222233322 1133444443321 134689999999 89
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.-. ..+|+..||.
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPT 138 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPT 138 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCS
T ss_pred HHHHHHHHHHh------cCCCEEEecC
Confidence 99998888643 4688999998
No 19
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=69.08 E-value=39 Score=29.13 Aligned_cols=64 Identities=14% Similarity=0.108 Sum_probs=43.6
Q ss_pred hhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 017465 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (371)
Q Consensus 97 ~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~~Vln~L~ 168 (371)
....+.....|...++ ||+.+...+ +.+..+.++++++.+ ..-...|.++||.+-+--++.++.
T Consensus 18 ~~v~~~a~~~l~~~gi~~ev~V~SaH----Rtp~~l~~~~~~~~~----~g~~ViIa~AG~aa~LpgvvA~~t 82 (166)
T 3oow_A 18 WSTMKECCDILDNLGIGYECEVVSAH----RTPDKMFDYAETAKE----RGLKVIIAGAGGAAHLPGMVAAKT 82 (166)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEECSSCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCc----CCHHHHHHHHHHHHh----CCCcEEEEECCcchhhHHHHHhcc
Confidence 3466777777777665 888887543 246677777765421 112346778899999999998875
No 20
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=69.02 E-value=9.6 Score=37.09 Aligned_cols=101 Identities=16% Similarity=0.154 Sum_probs=57.2
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhc------CeeEE--EeecccceeecchhHHHHHHhccchhhhc--cCCCc
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKE------QVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKM 149 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~------~v~dl--~~~~p~~~~t~~~~~a~~la~~~~~~a~~--~~~~~ 149 (371)
.++++|+.++... +...+++...|... . +++ ....+.+. .......+++.+.+.+ .. ..+.+
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g-~~~~~~~~~~gE~-~k~~~~v~~~~~~~~~--~~~~~~r~d 107 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPS-PRLLIYNRPPGEV-SKSRQTKADIEDWMLS--QNPPCGRDT 107 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSC-CEEEEEEECSSGG-GSSHHHHHHHHHHHHT--SSSCCCTTC
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCC-ceeEEEEeCCCCC-CCCHHHHHHHHHHHHH--cCCCCCCCC
Confidence 4688899885432 22556676666543 2 222 22222110 1112334444433211 11 23348
Q ss_pred EEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC--CCccchh
Q 017465 150 RIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (371)
Q Consensus 150 ~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl--GTGNDlA 193 (371)
.||++|| |++..+...+.... ...+|+..||. ||+.|-+
T Consensus 108 ~iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 108 VVIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 8888887 88888887776432 25689999999 8888874
No 21
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=68.14 E-value=24 Score=30.67 Aligned_cols=75 Identities=12% Similarity=0.110 Sum_probs=49.7
Q ss_pred cEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017465 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (371)
Q Consensus 82 ~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV 160 (371)
++.||. |+..-..+.+.....|...++ ||+.+...+. .+....++++++.+ ..-...|.++||.+-+
T Consensus 9 ~V~Iim----gS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR----~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIM----GSDSDWPVMADAAAALAEFDIPAEVRVVSAHR----TPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----CHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEE----CcHHhHHHHHHHHHHHHHcCCCEEEEEECCCC----CHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 466665 332223456677777776665 8888876543 56778888765431 1223578888999999
Q ss_pred HHHHHHHh
Q 017465 161 GWVLGSVG 168 (371)
Q Consensus 161 ~~Vln~L~ 168 (371)
--++.++.
T Consensus 77 pgvvA~~t 84 (174)
T 3lp6_A 77 PGMVAAAT 84 (174)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcc
Confidence 99998885
No 22
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=68.06 E-value=32 Score=29.89 Aligned_cols=77 Identities=16% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCc-EEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 80 EAP-MVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 80 ~~~-llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
++| +.||. |+..-....+.....|...++ ||+.+...+ +.+....++++++.+ ..-...|.++||.
T Consensus 11 m~~~V~Iim----GS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaH----R~p~~~~~~~~~a~~----~g~~ViIa~AG~a 78 (174)
T 3kuu_A 11 AGVKIAIVM----GSKSDWATMQFAADVLTTLNVPFHVEVVSAH----RTPDRLFSFAEQAEA----NGLHVIIAGNGGA 78 (174)
T ss_dssp CCCCEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTTT----TTCSEEEEEEESS
T ss_pred CCCcEEEEE----CcHHHHHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEECChh
Confidence 443 55554 333223456677777777665 888887654 356778888876421 1123577888999
Q ss_pred hHHHHHHHHHh
Q 017465 158 GTVGWVLGSVG 168 (371)
Q Consensus 158 GTV~~Vln~L~ 168 (371)
+-+--++.++.
T Consensus 79 a~LpgvvA~~t 89 (174)
T 3kuu_A 79 AHLPGMLAAKT 89 (174)
T ss_dssp CCHHHHHHHTC
T ss_pred hhhHHHHHhcc
Confidence 99999998875
No 23
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=67.73 E-value=6 Score=38.21 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=53.5
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
.++++|+.++.... ...+++...|...-.++.......+ .......+.++.+.+.+ ....+.+.||+.|| |+
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge-~~k~~~~v~~~~~~~~~--~~~~r~d~iIalGG-Gs 105 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGE-EYKTLSTVTNLQERAIA--LGANRRTAIVAVGG-GL 105 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSG-GGCSHHHHHHHHHHHHH--TTCCTTEEEEEEES-HH
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCcEEEEECC-hH
Confidence 47899999876542 3567777777653012111211111 01122334444332210 11234688888888 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.... ...+|+..||.
T Consensus 106 v~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 106 TGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----cCCCCEEEECC
Confidence 999888776532 25689999998
No 24
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=65.61 E-value=11 Score=36.54 Aligned_cols=84 Identities=17% Similarity=0.231 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
.++++|+..+.. ..+.+++.+.|.. .+.+....|.+ .....++.++.+. ..+.|.||++|| |+
T Consensus 37 ~~rvliVtd~~~-----~~~~~~v~~~L~~--~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gs 99 (364)
T 3iv7_A 37 SAKVMVIAGERE-----MSIAHKVASEIEV--AIWHDEVVMHV----PIEVAERARAVAT-----DNEIDLLVCVGG-GS 99 (364)
T ss_dssp CSSEEEECCGGG-----HHHHHHHTTTSCC--SEEECCCCTTC----BHHHHHHHHHHHH-----HTTCCEEEEEES-HH
T ss_pred CCEEEEEECCCH-----HHHHHHHHHHcCC--CEEEcceecCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-cH
Confidence 356777776542 2355666666653 22233333322 1233444443221 245689999999 89
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+... ..+|+..||.
T Consensus 100 ~iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 100 TIGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEcC
Confidence 99988887653 4578888887
No 25
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=63.27 E-value=29 Score=29.62 Aligned_cols=61 Identities=16% Similarity=0.249 Sum_probs=43.4
Q ss_pred hhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 017465 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (371)
Q Consensus 97 ~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~~Vln~L~ 168 (371)
....+.....|...++ ||+.+...+ +.+....++++++ ...-.|.++||.|-+--++.++.
T Consensus 12 ~~v~~~a~~~l~~~gi~~dv~V~saH----R~p~~~~~~~~~a-------~~~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 12 LKIAEKAVNILKEFGVEFEVRVASAH----RTPELVEEIVKNS-------KADVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHC-------CCSEEEEEEESSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHhc-------CCCEEEEEcCchhhhHHHHHhcc
Confidence 3456666777776665 888887654 3567778887654 22457888999999999997774
No 26
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=63.09 E-value=39 Score=29.22 Aligned_cols=63 Identities=14% Similarity=0.080 Sum_probs=43.9
Q ss_pred hhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEEcCchHHHHHHHHHh
Q 017465 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (371)
Q Consensus 97 ~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~GGDGTV~~Vln~L~ 168 (371)
....+.....|...++ ||+.+...+ +.+....++++++. .+. .-.|.++||.+-+--++.++.
T Consensus 19 ~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~LpgvvA~~t 83 (169)
T 3trh_A 19 LSTMETAFTELKSLGIPFEAHILSAH----RTPKETVEFVENAD-----NRGCAVFIAAAGLAAHLAGTIAAHT 83 (169)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHHH-----HTTEEEEEEEECSSCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHH-----hCCCcEEEEECChhhhhHHHHHhcC
Confidence 3456777777777665 888887654 35677788876542 122 256778899999999998875
No 27
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=62.97 E-value=14 Score=36.08 Aligned_cols=101 Identities=13% Similarity=0.205 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV 160 (371)
++++|+..+.+-.. ..+.+++...|....++.+....|.+ ......++++.+. ..+.|.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 68888886543211 12567777777511122222222222 1233444443221 134588999988 788
Q ss_pred HHHHHHHhhcccC---------------CCCCCCcEEEeeC--CCccchh
Q 017465 161 GWVLGSVGELNKQ---------------GREPVPPVAIIPL--GTGNDLS 193 (371)
Q Consensus 161 ~~Vln~L~~~~~~---------------~~~~~~pigIIPl--GTGNDlA 193 (371)
..+...+.-.... .....+|+..||. |||-...
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt 168 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESN 168 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhC
Confidence 8888777543110 0125689999998 6665444
No 28
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=62.75 E-value=40 Score=28.96 Aligned_cols=64 Identities=13% Similarity=0.135 Sum_probs=44.3
Q ss_pred hhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchHHHHHHHHHh
Q 017465 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (371)
Q Consensus 97 ~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGTV~~Vln~L~ 168 (371)
....+.....|...++ ||+.+...+ +.+....++++++.+ ..-.-.|.++||.+-+--++.++.
T Consensus 16 ~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~LpgvvA~~t 80 (163)
T 3ors_A 16 WKIMQESCNMLDYFEIPYEKQVVSAH----RTPKMMVQFASEARE----RGINIIIAGAGGAAHLPGMVASLT 80 (163)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTTT----TTCCEEEEEEESSCCHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEECCc----CCHHHHHHHHHHHHh----CCCcEEEEECCchhhhHHHHHhcc
Confidence 3456667777776665 888887654 356778888776421 111356778899999999998885
No 29
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=62.59 E-value=15 Score=36.05 Aligned_cols=96 Identities=16% Similarity=0.199 Sum_probs=55.1
Q ss_pred CCCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 79 ~~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
..++++|+.++... +.+.+++...|...+. +........+. ......++++.+.+.+ ....+.+.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g~~~~~~~~~~gE~-~kt~~~v~~~~~~l~~--~~~~R~d~IIAvGG- 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIGCQHALLELPDGEQ-YKTLETFNTVMSFLLE--HNYSRDVVVIALGG- 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHTCEEEEEEECSSGG-GCBHHHHHHHHHHHHH--TTCCTTCEEEEEES-
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcCCeEEEEEECCCcC-CchHHHHHHHHHHHHh--cCCCcCcEEEEECC-
Confidence 35789999987653 3367788888876542 22211111110 0112344444433211 11334578888888
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 158 GTV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
|++..+...+.... ...+|+..||.
T Consensus 133 Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 88888887775322 35689999998
No 30
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=60.04 E-value=45 Score=29.12 Aligned_cols=78 Identities=17% Similarity=0.208 Sum_probs=48.9
Q ss_pred CCCCcE-EEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCC-CcEEEEE
Q 017465 78 PPEAPM-VVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVA 154 (371)
Q Consensus 78 ~~~~~l-lviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~-~~~Ivv~ 154 (371)
..++|+ .||. |+..-....+.....|...++ |++.+...+. .+..+.++++++. ..+ ...|.++
T Consensus 19 ~~mkp~V~Iim----GS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHR----tp~~l~~~~~~a~-----~~g~~ViIa~A 85 (181)
T 4b4k_A 19 SHMKSLVGVIM----GSTSDWETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETAR-----ERGLKVIIAGA 85 (181)
T ss_dssp ---CCSEEEEE----SSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEE
T ss_pred CCCCccEEEEE----CCHhHHHHHHHHHHHHHHcCCCeeEEEEcccc----ChHHHHHHHHHHH-----hcCceEEEEec
Confidence 446664 4555 332223566777778887776 8888876542 4566777776642 122 3467778
Q ss_pred cCchHHHHHHHHHh
Q 017465 155 GGDGTVGWVLGSVG 168 (371)
Q Consensus 155 GGDGTV~~Vln~L~ 168 (371)
||.+-+--++.++.
T Consensus 86 G~aahLpGvvAa~T 99 (181)
T 4b4k_A 86 GGAAHLPGMVAAKT 99 (181)
T ss_dssp CSSCCHHHHHHTTC
T ss_pred cccccchhhHHhcC
Confidence 99999998887654
No 31
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=57.10 E-value=36 Score=32.23 Aligned_cols=85 Identities=9% Similarity=0.111 Sum_probs=50.5
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
++++|+..+..- +...+++...|....+ +......|.+ .....+++ +.+ + ..+.+.||++|| |+
T Consensus 35 ~~~livtd~~~~----~~~~~~v~~~L~~~g~~~~~~~~~~~~----~~~~v~~~-~~~----~-~~~~d~IIavGG-Gs 99 (354)
T 3ce9_A 35 KRVSLYFGEGIY----ELFGETIEKSIKSSNIEIEAVETVKNI----DFDEIGTN-AFK----I-PAEVDALIGIGG-GK 99 (354)
T ss_dssp SEEEEEEETTHH----HHHHHHHHHHHHTTTCEEEEEEEECCC----BHHHHHHH-HTT----S-CTTCCEEEEEES-HH
T ss_pred CeEEEEECccHH----HHHHHHHHHHHHHcCCeEEEEecCCCC----CHHHHHHH-HHh----h-hcCCCEEEEECC-hH
Confidence 588899876543 2356777777765432 2111102222 12334444 332 1 245688898887 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.-. ..+|+..||.
T Consensus 100 v~D~aK~vA~~------~~~p~i~IPT 120 (354)
T 3ce9_A 100 AIDAVKYMAFL------RKLPFISVPT 120 (354)
T ss_dssp HHHHHHHHHHH------HTCCEEEEES
T ss_pred HHHHHHHHHhh------cCCCEEEecC
Confidence 88888877642 4578999997
No 32
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=55.90 E-value=58 Score=28.45 Aligned_cols=77 Identities=16% Similarity=0.106 Sum_probs=50.8
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
...+.||.=..| -..+.+.....|...++ ||+.+...+ +.+....++++++.. ..-...|.++||.+
T Consensus 21 ~~~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa 88 (182)
T 1u11_A 21 APVVGIIMGSQS----DWETMRHADALLTELEIPHETLIVSAH----RTPDRLADYARTAAE----RGLNVIIAGAGGAA 88 (182)
T ss_dssp CCSEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSC
T ss_pred CCEEEEEECcHH----HHHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEecCchh
Confidence 445777763333 23456667777776665 888887654 356778888765421 11235677889999
Q ss_pred HHHHHHHHHh
Q 017465 159 TVGWVLGSVG 168 (371)
Q Consensus 159 TV~~Vln~L~ 168 (371)
-+--++.++.
T Consensus 89 ~LpgvvA~~t 98 (182)
T 1u11_A 89 HLPGMCAAWT 98 (182)
T ss_dssp CHHHHHHHHC
T ss_pred hhHHHHHhcc
Confidence 9999998885
No 33
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=52.25 E-value=18 Score=35.07 Aligned_cols=93 Identities=17% Similarity=0.119 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
++++|+.++... ++.+++...|...+. +........+ .......++++.+.+.+ ....+.+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~-----~~~~~v~~~L~~~g~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~--~~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLA-----ETAEEIRKRLAGKGVDAHRIEIPDAE-AGKDLPVVGFIWEVLGR--IGIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGH-----HHHHHHHHHHHHTTCEEEEEECCSGG-GGGBHHHHHHHHHHHHH--HTCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHH-----HHHHHHHHHHHhcCCcceEEEeCCCC-CCCCHHHHHHHHHHHHH--cCCCCCcEEEEECC-hH
Confidence 789999987643 245777777766432 2222211111 00112334444432211 11345688999988 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 888887776432 25688999996
No 34
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=52.17 E-value=26 Score=33.49 Aligned_cols=86 Identities=13% Similarity=0.129 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
++++|+..+.+-. .+.+++...|....+ +.+....+.+ + ....+++.+.+ + ..+.+.||++|| |+
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g~~~~~~~~~ge~--~--~~~v~~~~~~~----~-~~~~d~IIavGG-Gs 97 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGNIAAEEVVFSGEA--S--RNEVERIANIA----R-KAEAAIVIGVGG-GK 97 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTTCEEEEEECCSSC--B--HHHHHHHHHHH----H-HTTCSEEEEEES-HH
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcCCeEEEEeeCCCC--C--HHHHHHHHHHH----H-hcCCCEEEEeCC-hH
Confidence 7888988765432 356777777765432 2222222211 1 12344444322 1 234689999988 88
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.-. ..+|+..||.
T Consensus 98 v~D~aK~iA~~------~~~p~i~IPT 118 (370)
T 1jq5_A 98 TLDTAKAVADE------LDAYIVIVPT 118 (370)
T ss_dssp HHHHHHHHHHH------HTCEEEEEES
T ss_pred HHHHHHHHHHh------cCCCEEEecc
Confidence 88888877642 3578888887
No 35
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=51.87 E-value=18 Score=34.40 Aligned_cols=94 Identities=15% Similarity=0.138 Sum_probs=51.8
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCchH
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (371)
.++++|+.++..... ..+++...|...++ ++......+. .......+++.+.+.+ ....+.+.||++|| |+
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~~-~~~~~~~~e~-~k~~~~v~~~~~~~~~--~~~~r~d~iIavGG-Gs 96 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALEV-RVCVIESGEK-YKNFHSLERILNNAFE--MQLNRHSLMIALGG-GV 96 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSCE-EEEEECSSGG-GCSHHHHHHHHHHHHH--TTCCTTCEEEEEES-HH
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCCc-EEEEeCCCCC-CCCHHHHHHHHHHHHh--cCCCCCceEEEECC-hH
Confidence 468899988654332 45667777754432 2222111110 0012334444433211 11344588888887 78
Q ss_pred HHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 160 V~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
+..+...+.... ...+|+..||.
T Consensus 97 v~D~ak~~A~~~----~rgip~i~IPT 119 (343)
T 3clh_A 97 ISDMVGFASSIY----FRGIDFINIPT 119 (343)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCCEEEeCC
Confidence 888887776432 25689999995
No 36
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=50.93 E-value=41 Score=33.35 Aligned_cols=86 Identities=16% Similarity=0.152 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
.++++|+..+.+-. .+.+++...|...++ +.+....+.+ .....+++++.+ +. +.|.||++|| |
T Consensus 91 ~~rvlIVtd~~~~~----~~~~~v~~~L~~~gi~~~~~~~~ge~----~~~~v~~~~~~~----~~--~~D~IIAvGG-G 155 (450)
T 1ta9_A 91 TKSAVVLADQNVWN----ICANKIVDSLSQNGMTVTKLVFGGEA----SLVELDKLRKQC----PD--DTQVIIGVGG-G 155 (450)
T ss_dssp SSEEEEEEEHHHHH----HTHHHHHHHHHHTTCEEEEEEECSCC----CHHHHHHHHTTS----CT--TCCEEEEEES-H
T ss_pred CCEEEEEECccHHH----HHHHHHHHHHHHCCCeEEEEeeCCCC----CHHHHHHHHHHH----hh--CCCEEEEeCC-c
Confidence 34888888765432 255677777765432 2212222211 113455555432 22 6688999988 8
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 159 TV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
++..+...+.-. ..+|+..||.
T Consensus 156 SviD~AK~iA~~------~giP~I~IPT 177 (450)
T 1ta9_A 156 KTMDSAKYIAHS------MNLPSIICPT 177 (450)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEES
T ss_pred HHHHHHHHHHHh------cCCCEEEEeC
Confidence 888888887642 4688999997
No 37
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=49.71 E-value=92 Score=29.77 Aligned_cols=103 Identities=14% Similarity=0.180 Sum_probs=54.7
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
.++++|+..+..-... ..+.+++...|...++ + .+....|.+ .....+++++.+. ..+.|.||++||
T Consensus 33 ~~~~livtd~~~~~~~-~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 101 (387)
T 3bfj_A 33 GKKALLVTDKGLRAIK-DGAVDKTLHYLREAGIEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG- 101 (387)
T ss_dssp CSEEEEECCTTTC--C-CSSHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES-
T ss_pred CCEEEEEECcchhhcc-chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 3688888876554320 0145666666755432 1 222222322 1234444443321 234588998988
Q ss_pred hHHHHHHHHHhhcc---------c---CCCCCCCcEEEeeC--CCccchh
Q 017465 158 GTVGWVLGSVGELN---------K---QGREPVPPVAIIPL--GTGNDLS 193 (371)
Q Consensus 158 GTV~~Vln~L~~~~---------~---~~~~~~~pigIIPl--GTGNDlA 193 (371)
|++..+...+.-.- . ......+|+..||. |||-...
T Consensus 102 Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 151 (387)
T 3bfj_A 102 GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVT 151 (387)
T ss_dssp HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGC
T ss_pred cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcccccc
Confidence 78888877765420 0 00125689999997 5554433
No 38
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=48.50 E-value=7 Score=31.89 Aligned_cols=35 Identities=9% Similarity=-0.012 Sum_probs=29.5
Q ss_pred hhhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 14 SSMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
...|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 71 ~~fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~ 106 (144)
T 3s4e_A 71 FEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNS 106 (144)
T ss_dssp HHHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 35667777788888 999999999999999999863
No 39
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=48.19 E-value=7.1 Score=33.94 Aligned_cols=34 Identities=15% Similarity=-0.020 Sum_probs=28.9
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||..|..|+..++.+||...
T Consensus 108 ~fI~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 108 SIIHAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 3567777778888 999999999999999999864
No 40
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=47.43 E-value=25 Score=33.54 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=51.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCee-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVF-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
.++++|+.++... + ..+++...|. ..+. .+....+.+ ....++++.+.+.+ ....+.+.||++|| |
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~~~~~~~~ge~~~----~~~~v~~~~~~~~~--~~~~r~d~IIavGG-G 94 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VRHLLGLPGGEAAK----SLEVYGKVLSWLAE--KGLPRNATLLVVGG-G 94 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CCCEEEECCSGGGS----SHHHHHHHHHHHHH--HTCCTTCEEEEEES-H
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cCeEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCCEEEEECC-c
Confidence 4789999886432 3 6677777775 2221 111111211 12334444432211 11244588888887 7
Q ss_pred HHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 159 TV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
++..+...+.... ...+|+..||.
T Consensus 95 sv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 95 TLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHHh----ccCCCEEEecC
Confidence 8888888776432 25689999997
No 41
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=46.74 E-value=8.5 Score=32.31 Aligned_cols=34 Identities=6% Similarity=-0.169 Sum_probs=28.5
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||..|..|+..++.+||...
T Consensus 78 ~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 78 KFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 4566777777777 999999999999999999864
No 42
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=46.68 E-value=9.2 Score=31.07 Aligned_cols=35 Identities=17% Similarity=0.189 Sum_probs=29.2
Q ss_pred hhhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 14 SSMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 14 ~~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
...|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 71 ~~~i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 71 IEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 34567777777778 999999999999999999864
No 43
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=45.84 E-value=41 Score=31.94 Aligned_cols=40 Identities=30% Similarity=0.333 Sum_probs=31.6
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017465 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA 193 (371)
.+-+.+++.|||||..-+. .|.+ ..+|+--||-===||+.
T Consensus 93 ~~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGAM-RLTE-------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp TTCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEBCTTCCCT
T ss_pred cCCCEEEEECCCchHHHHH-HHHh-------hCCCEEEEeccccCCCC
Confidence 3457999999999987653 4554 35788889998899997
No 44
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=45.49 E-value=71 Score=30.71 Aligned_cols=100 Identities=11% Similarity=0.207 Sum_probs=55.9
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
.++++|+..+.- ....+.+++...|...++ + .+....|.+ .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~liVtd~~~---~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 97 (383)
T 3ox4_A 31 FKNALIVSDAFM---NKSGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG- 97 (383)
T ss_dssp CCEEEEEEEHHH---HHTTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECCch---hhCchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 467888876531 111256778888876542 2 222233332 1234444443321 135689999999
Q ss_pred hHHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccch
Q 017465 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDL 192 (371)
Q Consensus 158 GTV~~Vln~L~~~~~------------~~~~~~~pigIIPl--GTGNDl 192 (371)
|++..+...+.-... ......+|+..||. |||-..
T Consensus 98 Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~ 146 (383)
T 3ox4_A 98 GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEM 146 (383)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTT
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhc
Confidence 888888877643320 01124689999997 554433
No 45
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=44.46 E-value=82 Score=30.46 Aligned_cols=101 Identities=17% Similarity=0.240 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCch
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (371)
++++|+..+.+-.. ..+.+++...|...++ + .+..+.|.+ .....+++++.+. ..+.|.||++|| |
T Consensus 44 ~r~liVtd~~~~~~--~g~~~~v~~~L~~~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-G 111 (407)
T 1vlj_A 44 RKVLFLYGGGSIKK--NGVYDQVVDSLKKHGIEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG-G 111 (407)
T ss_dssp CEEEEEECSSHHHH--SSHHHHHHHHHHHTTCEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-H
T ss_pred CeEEEEECchHHhh--ccHHHHHHHHHHHcCCeEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 67888876332111 1256777777765432 2 111122222 1234444443321 235589999988 7
Q ss_pred HHHHHHHHHhhccc------------CCCCCCCcEEEeeC--CCccchh
Q 017465 159 TVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (371)
Q Consensus 159 TV~~Vln~L~~~~~------------~~~~~~~pigIIPl--GTGNDlA 193 (371)
++..+...+.-... ......+|+..||. |||--..
T Consensus 112 sviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 112 SVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp HHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred hHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 88888877754310 01125689999997 5554433
No 46
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=43.15 E-value=52 Score=30.36 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=22.1
Q ss_pred CCCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 146 ~~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
...|.+|..|| +|+.|++. ...|.-++|.
T Consensus 224 ~~aDlvI~~gG-~T~~E~~~-----------~g~P~i~ip~ 252 (282)
T 3hbm_A 224 NESNKLIISAS-SLVNEALL-----------LKANFKAICY 252 (282)
T ss_dssp HTEEEEEEESS-HHHHHHHH-----------TTCCEEEECC
T ss_pred HHCCEEEECCc-HHHHHHHH-----------cCCCEEEEeC
Confidence 34578899999 99999972 3467777885
No 47
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=42.12 E-value=10 Score=30.88 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=27.8
Q ss_pred hhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
.|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 73 FISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 566777777778 999999999999999999863
No 48
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=40.86 E-value=97 Score=30.62 Aligned_cols=75 Identities=17% Similarity=0.216 Sum_probs=49.2
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-eEEEeecccceeecchhHHHHHHhccchhhhccCCC--cEEEEEcCc
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~--~~Ivv~GGD 157 (371)
..+.||. |+..-..+.+.....|...++ ||+.+...+ ..+....++++++. .... ..|.++||.
T Consensus 266 ~~V~Ii~----gs~SD~~~~~~a~~~l~~~gi~~~v~V~saH----R~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLM----GSTSDLGHCEKIKKACGNFGIPCELRVTSAH----KGPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEE----SCGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEe----cCcccHHHHHHHHHHHHHcCCceEEeeeecc----CCHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 3455665 333223456667777776665 888887543 35677888877542 1222 467778999
Q ss_pred hHHHHHHHHHh
Q 017465 158 GTVGWVLGSVG 168 (371)
Q Consensus 158 GTV~~Vln~L~ 168 (371)
|.+--|+.++.
T Consensus 333 a~Lpgvva~~t 343 (425)
T 2h31_A 333 NGLGPVMSGNT 343 (425)
T ss_dssp CCHHHHHHHHC
T ss_pred cchHhHHhccC
Confidence 99999999885
No 49
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=38.86 E-value=12 Score=30.47 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.9
Q ss_pred hhhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017465 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (371)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (371)
.|+..+..|..+ |||.-|..|+-.++.+||..
T Consensus 75 ~i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 75 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 556666667777 99999999999999999985
No 50
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=38.41 E-value=42 Score=31.85 Aligned_cols=39 Identities=26% Similarity=0.241 Sum_probs=30.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA 193 (371)
+-+.+++.|||||..-+. .|.+ ..+++--||-===||+.
T Consensus 93 ~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 93 GIDAVVVIGGDGSYHGAL-QLTR-------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp TCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEEETTCCCT
T ss_pred CCCEEEEECCchHHHHHH-HHHH-------hCCCEEEEeecccCCCC
Confidence 457999999999987654 4544 35788889998889997
No 51
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=37.54 E-value=13 Score=30.89 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=27.5
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 80 ~~i~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 80 AAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 3456666667777 999999999999999998864
No 52
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=36.77 E-value=13 Score=31.09 Aligned_cols=34 Identities=18% Similarity=0.072 Sum_probs=27.7
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 74 ~fi~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 74 KFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 3556666677777 999999999999999999863
No 53
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=36.48 E-value=87 Score=29.88 Aligned_cols=99 Identities=13% Similarity=0.233 Sum_probs=53.6
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcCe-e-EEEeecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
.++++|+..+..-. ..+.+++...|....+ + .+....|.+ .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~livtd~~~~~---~g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 97 (386)
T 1rrm_A 31 YQKALIVTDKTLVQ---CGVVAKVTDKMDAAGLAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG- 97 (386)
T ss_dssp CCEEEEECBHHHHH---TTHHHHHHHHHHHTTCEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECcchhh---chHHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 35788887653311 1256777777765432 1 222222322 1234444444321 134589999988
Q ss_pred hHHHHHHHHHhhcccC--------------CCCCCCcEEEeeC--CCccc
Q 017465 158 GTVGWVLGSVGELNKQ--------------GREPVPPVAIIPL--GTGND 191 (371)
Q Consensus 158 GTV~~Vln~L~~~~~~--------------~~~~~~pigIIPl--GTGND 191 (371)
|++..+...+.-.... .....+|+..||. |||-.
T Consensus 98 Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSe 147 (386)
T 1rrm_A 98 GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAE 147 (386)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTT
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhh
Confidence 7888887766433200 0024689999997 55443
No 54
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=36.22 E-value=14 Score=30.19 Aligned_cols=34 Identities=12% Similarity=0.095 Sum_probs=27.8
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 80 ~~i~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 80 QFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 3556666777677 999999999999999998864
No 55
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=34.71 E-value=16 Score=31.42 Aligned_cols=34 Identities=15% Similarity=-0.040 Sum_probs=27.7
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 88 ~fI~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 88 DHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 3456666677778 999999999999999999763
No 56
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=34.37 E-value=16 Score=30.80 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=27.0
Q ss_pred hhhhhhhhc-Ccce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGC-GLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~-~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+.. |..+ |||.-|..|+-.++.+||...
T Consensus 105 ~~i~~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 105 DFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHHHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 345555555 6677 999999999999999999763
No 57
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=34.19 E-value=91 Score=31.37 Aligned_cols=44 Identities=27% Similarity=0.284 Sum_probs=31.2
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhc-ccCCCCCCCcEEEeeCCCccchh
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGEL-NKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~-~~~~~~~~~pigIIPlGTGNDlA 193 (371)
+-+.++++|||||..-+. .|.+. .+. ...+++--||-===||+.
T Consensus 189 ~Id~LvvIGGdgS~~~A~-~L~e~~~~~--g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGAL-VISQEAKRR--GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp TCSEEEEEECHHHHHHHH-HHHHHHHHH--TCCCEEEEEECCTTSSCC
T ss_pred CCCEEEEeCCCchHHHHH-HHHHHHHHh--CCCceEEeccccccCCCC
Confidence 457999999999988554 23211 111 246889999998899996
No 58
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=33.80 E-value=9.7 Score=27.54 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.5
Q ss_pred cEEEEEcCchHH
Q 017465 149 MRIVVAGGDGTV 160 (371)
Q Consensus 149 ~~Ivv~GGDGTV 160 (371)
.-|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 369999999997
No 59
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=33.53 E-value=18 Score=29.62 Aligned_cols=33 Identities=15% Similarity=0.047 Sum_probs=26.7
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (371)
..|+..+..|..+ |||.-|..|+-.++.+||..
T Consensus 81 ~~i~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~ 114 (154)
T 2r0b_A 81 EFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIME 114 (154)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEcCCCCChHHHHHHHHHHH
Confidence 3456666667777 99999999999999999875
No 60
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=33.35 E-value=19 Score=31.96 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=28.1
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 74 ~fI~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 74 DFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 3566777777778 999999999999999999863
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=33.25 E-value=48 Score=28.58 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=32.2
Q ss_pred chhHHHHHHhccchhhhccCCCcEEEEEcC-chHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 127 GLACLEKLAELGDFCAKDTRQKMRIVVAGG-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 127 ~~~~a~~la~~~~~~a~~~~~~~~Ivv~GG-DGTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
+...+++|++.. ......||..|| -|-...+..+..+. ....+||||-.
T Consensus 30 ~~~~A~~lg~~L------a~~g~~lVsGGg~~Gim~aa~~gAl~~------gG~tigVlP~~ 79 (176)
T 2iz6_A 30 QLVMANELGKQI------ATHGWILLTGGRSLGVMHEAMKGAKEA------GGTTIGVLPGP 79 (176)
T ss_dssp HHHHHHHHHHHH------HHTTCEEEEECSSSSHHHHHHHHHHHT------TCCEEEEECC-
T ss_pred HHHHHHHHHHHH------HHCCCEEEECCCccCHhHHHHHHHHHc------CCEEEEEeCch
Confidence 334455555432 234567888888 78888888777652 45789999965
No 62
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=32.88 E-value=17 Score=30.77 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=28.0
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 99 ~~i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~ 133 (176)
T 3cm3_A 99 AFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSK 133 (176)
T ss_dssp HHHHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHH
Confidence 4566777667777 999999999999999999763
No 63
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=32.00 E-value=49 Score=28.77 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=30.5
Q ss_pred hhHHHHHHhccchhhhccCCCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 128 LACLEKLAELGDFCAKDTRQKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 128 ~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
...+++|++.. ......||..||. |-...+..+..+ .....+||+|-+
T Consensus 19 ~~~A~~lg~~L------a~~g~~lV~GGg~~GiM~aa~~gA~~------~gG~~iGv~p~~ 67 (191)
T 1t35_A 19 KRKAAELGVYM------AEQGIGLVYGGSRVGLMGTIADAIME------NGGTAIGVMPSG 67 (191)
T ss_dssp HHHHHHHHHHH------HHTTCEEEECCCCSHHHHHHHHHHHT------TTCCEEEEEETT
T ss_pred HHHHHHHHHHH------HHCCCEEEECCCcccHHHHHHHHHHH------cCCeEEEEeCch
Confidence 34455555432 1234555655666 888888877765 245789999976
No 64
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=31.92 E-value=25 Score=33.46 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=47.3
Q ss_pred CcEEEEEcCCCCCCChhhHHHHHHHHhhhcCeeEEEe---ecccceeecchhHHHHHHhccchhhhccCCCcEEEEEcCc
Q 017465 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (371)
Q Consensus 81 ~~llviiNP~SG~~~g~~l~~~l~~~L~~~~v~dl~~---~~p~~~~t~~~~~a~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (371)
++++|+.++... +...+++...| ....+++.. ..+.+ .....+++.+.+.+ ....+.+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p----~~~~v~~~~~~~~~--~~~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTK----TFEQYQETLEYILS--HHVTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGC----SHHHHHHHHHHHHT--TCCCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCceEEEECC-
Confidence 688898875422 22556676666 432122222 22211 12334444433211 11233488898888
Q ss_pred hHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 158 GTV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
|++..+...+.... ...+|+..||.
T Consensus 100 Gsv~D~ak~vA~~~----~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAATL----LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEECC
Confidence 88888888776432 36789999998
No 65
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=31.60 E-value=15 Score=34.27 Aligned_cols=14 Identities=43% Similarity=0.826 Sum_probs=11.8
Q ss_pred CcEEEEEcCchHHH
Q 017465 148 KMRIVVAGGDGTVG 161 (371)
Q Consensus 148 ~~~Ivv~GGDGTV~ 161 (371)
..++|||||+||-+
T Consensus 46 ~q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 46 GQRIIFCGGEGTSS 59 (275)
T ss_dssp GCEEEEESSSSSST
T ss_pred ccEEEEecCCCCCC
Confidence 36999999999865
No 66
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=31.03 E-value=19 Score=29.68 Aligned_cols=33 Identities=15% Similarity=-0.018 Sum_probs=26.8
Q ss_pred hhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
.|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 77 fi~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 77 FIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 456666667777 999999999999999998753
No 67
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=30.80 E-value=48 Score=29.58 Aligned_cols=33 Identities=33% Similarity=0.532 Sum_probs=24.2
Q ss_pred CCcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEee
Q 017465 147 QKMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIP 185 (371)
Q Consensus 147 ~~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIP 185 (371)
....||..||. |-...+..+..+. ....+||+|
T Consensus 40 ~g~~lV~GGg~~GlM~aa~~gA~~~------GG~~iGv~p 73 (216)
T 1ydh_A 40 RKIDLVYGGGSVGLMGLISRRVYEG------GLHVLGIIP 73 (216)
T ss_dssp TTCEEEECCCSSHHHHHHHHHHHHT------TCCEEEEEE
T ss_pred CCCEEEECCCcccHhHHHHHHHHHc------CCcEEEEec
Confidence 34567777787 8887777777652 457899999
No 68
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=30.75 E-value=19 Score=31.92 Aligned_cols=33 Identities=15% Similarity=0.039 Sum_probs=26.5
Q ss_pred hhhhhh-hcCcce-EEeeccccccccchhhhhhHH
Q 017465 16 MIDSIR-GCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 16 ~~~~~~-~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
.|+..+ ..|..+ |||..|..|+-.++.+||...
T Consensus 130 fI~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 130 FIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp HHHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 455655 456667 999999999999999999863
No 69
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=30.43 E-value=19 Score=30.52 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=26.9
Q ss_pred hhhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017465 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (371)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (371)
.|+..+..|..+ |||.-|..|+-.++.+||..
T Consensus 79 ~i~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 79 FIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 456666667777 99999999999999999985
No 70
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=30.33 E-value=49 Score=28.96 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=23.7
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 148 ~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
...||..||. |-...+..+..+ .....+||+|--
T Consensus 44 g~~lv~GGG~~GlM~a~~~ga~~------~GG~viGv~p~~ 78 (189)
T 3sbx_A 44 GWTLVWGGGHVSAMGAVSSAARA------HGGWTVGVIPKM 78 (189)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHT------TTCCEEEEEETT
T ss_pred CCEEEECCCccCHHHHHHHHHHH------cCCcEEEEcCch
Confidence 3455555567 888888877765 245789999963
No 71
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=30.16 E-value=20 Score=29.17 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=25.4
Q ss_pred hhhhhhh-cCcce-EEeeccccccccchhhhhhHH
Q 017465 16 MIDSIRG-CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 16 ~~~~~~~-~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
.|+..+. .+..+ |||.-|..|+-.++.+||...
T Consensus 76 ~i~~~~~~~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 76 FIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp HHHHHHHSTTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 3445554 56667 999999999998888998763
No 72
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=29.62 E-value=24 Score=29.14 Aligned_cols=34 Identities=15% Similarity=0.071 Sum_probs=26.7
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||.-|..|+-.++.+||...
T Consensus 75 ~~i~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 75 NFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 3456666667777 999999999998888998653
No 73
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=28.77 E-value=23 Score=28.47 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=25.9
Q ss_pred hhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
.|+..+..|..+ |||.-|..|+-.++..||...
T Consensus 81 ~i~~~~~~~~~vlVHC~aG~~Rsg~~~~~~l~~~ 114 (151)
T 2img_A 81 IVDEANARGEAVGVHCALGFGRTGTMLACYLVKE 114 (151)
T ss_dssp HHHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 345555556666 999999999999999998764
No 74
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=28.03 E-value=37 Score=32.21 Aligned_cols=39 Identities=28% Similarity=0.291 Sum_probs=30.6
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA 193 (371)
+-+.+++.|||||..-+. .|.+ ..+|+--||-===||+.
T Consensus 93 ~Id~L~~IGGdgS~~~a~-~l~~-------~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGAK-KLTE-------HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp TCCEEEEEECTTHHHHHH-HHHH-------TTCCEEEEEEETTCCCT
T ss_pred CCCEEEEeCCcHHHHHHH-HHhc-------cCCcEEEeeccccCCCC
Confidence 457899999999987653 4543 45788889998889997
No 75
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=26.47 E-value=59 Score=28.64 Aligned_cols=34 Identities=24% Similarity=0.375 Sum_probs=24.2
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 148 ~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
...||-.||. |-...+..+..+ .....+||+|-.
T Consensus 53 g~~lV~GGG~~GlM~a~~~gA~~------~GG~viGv~p~~ 87 (199)
T 3qua_A 53 GWTLVSGGGNVSAMGAVAQAARA------KGGHTVGVIPKA 87 (199)
T ss_dssp TCEEEECCBCSHHHHHHHHHHHH------TTCCEEEEEEGG
T ss_pred CCEEEECCCccCHHHHHHHHHHH------cCCcEEEEeCch
Confidence 3456666676 888888887765 245789999963
No 76
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=26.44 E-value=66 Score=28.59 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=24.2
Q ss_pred CcEEEEEcCc-hHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 148 KMRIVVAGGD-GTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 148 ~~~Ivv~GGD-GTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
...||..||. |-...+..+..+ .....+||||-.
T Consensus 45 G~~vVsGGg~~GiM~aa~~gAl~------~GG~tiGVlP~~ 79 (215)
T 2a33_A 45 NIDLVYGGGSIGLMGLVSQAVHD------GGRHVIGIIPKT 79 (215)
T ss_dssp TCEEEECCCSSHHHHHHHHHHHH------TTCCEEEEEESS
T ss_pred CCEEEECCChhhHhHHHHHHHHH------cCCcEEEEcchH
Confidence 4566666776 888888777765 245789999964
No 77
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=26.26 E-value=27 Score=30.01 Aligned_cols=34 Identities=15% Similarity=-0.030 Sum_probs=27.2
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhHH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
..|+..+..|..+ |||..|..|+-.++.+||...
T Consensus 94 ~fi~~~~~~~~~VlVHC~aG~~RSgtvv~ayLm~~ 128 (190)
T 2wgp_A 94 DKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKF 128 (190)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHH
Confidence 3556666667777 999999999999889998764
No 78
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=26.14 E-value=24 Score=28.39 Aligned_cols=33 Identities=15% Similarity=0.083 Sum_probs=26.3
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (371)
..|+..+..|..+ |||.-|..|+-.++..||..
T Consensus 79 ~~i~~~~~~~~~vlVHC~~G~~Rsg~~~a~~l~~ 112 (150)
T 4erc_A 79 QIVDEANARGEAVGVHCALGFGRTGTMLACYLVK 112 (150)
T ss_dssp HHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 3455665666666 99999999999999999875
No 79
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Probab=26.03 E-value=27 Score=30.40 Aligned_cols=32 Identities=9% Similarity=-0.064 Sum_probs=25.1
Q ss_pred hhhhhh-cCcce-EEeeccccccccchhhhhhHH
Q 017465 17 IDSIRG-CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (371)
Q Consensus 17 ~~~~~~-~~~~~-~~~~~~~~r~~~~~p~yl~~~ 48 (371)
|+..+. .|-.+ |||..|..|+-.++.+||...
T Consensus 123 I~~~l~~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 156 (205)
T 2pq5_A 123 IRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIY 156 (205)
T ss_dssp HHHHHTSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCeEEEECCCCCcHHHHHHHHHHHHH
Confidence 444443 46667 999999999999999999853
No 80
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.66 E-value=72 Score=27.96 Aligned_cols=34 Identities=26% Similarity=0.305 Sum_probs=22.6
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeC
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPl 186 (371)
....||..|+-|-...+..+..+ .....+||||.
T Consensus 57 ~G~~vVsGg~~GiM~aa~~gAl~------~GG~~iGVlP~ 90 (195)
T 1rcu_A 57 KGYLVFNGGRDGVMELVSQGVRE------AGGTVVGILPD 90 (195)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHH------TTCCEEEEEST
T ss_pred CCCEEEeCCHHHHHHHHHHHHHH------cCCcEEEEeCC
Confidence 34566666666766666666654 24478999997
No 81
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=24.28 E-value=88 Score=32.00 Aligned_cols=45 Identities=22% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA 193 (371)
+-+.++++|||||..-+. .|.+... .....+++--||-===||++
T Consensus 166 ~Id~LvvIGGdgS~~~A~-~L~e~~~-~~~~~i~vIGiPkTIDNDl~ 210 (555)
T 2f48_A 166 NLNAIIIIGGDDSNTNAA-ILAEYFK-KNGENIQVIGVPKTIDADLR 210 (555)
T ss_dssp TCSEEEEEESHHHHHHHH-HHHHHHH-HTTCCCEEEEEEEETTCCCC
T ss_pred CCCEEEEeCCCcHHHHHH-HHHHHHH-HhCCCCcEEEeccccCCCCC
Confidence 457999999999987654 3332110 01346899999988899995
No 82
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=23.35 E-value=76 Score=29.19 Aligned_cols=37 Identities=16% Similarity=0.089 Sum_probs=27.5
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCC
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlG 187 (371)
..++|+..||..|+-+-+..|.++... .. .|-|+|.|
T Consensus 141 G~~rILTSG~~~~a~~g~~~L~~Lv~~---a~-~i~Im~Gg 177 (256)
T 1twd_A 141 GIARVLTSGQKSDALQGLSKIMELIAH---RD-APIIMAGA 177 (256)
T ss_dssp TCCEEEECTTSSSTTTTHHHHHHHHTS---SS-CCEEEEES
T ss_pred CCCEEECCCCCCCHHHHHHHHHHHHHh---hC-CcEEEecC
Confidence 468999999999988777777665432 23 68899875
No 83
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=22.59 E-value=2.9e+02 Score=23.08 Aligned_cols=105 Identities=20% Similarity=0.112 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCCCCChhhHHHHHHHHhhhcC-eeEEEeecccceeecc---hhHHHHHHhccchhhhccCCCcEEEEEc
Q 017465 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYG---LACLEKLAELGDFCAKDTRQKMRIVVAG 155 (371)
Q Consensus 80 ~~~llviiNP~SG~~~g~~l~~~l~~~L~~~~-v~dl~~~~p~~~~t~~---~~~a~~la~~~~~~a~~~~~~~~Ivv~G 155 (371)
|++-+.|..|-.|+.+...+.+++.+.|.+.+ |+... ..+.+....+ .+....+.+. ..+.+...|.||+..
T Consensus 1 m~mkIYlAGP~f~~~e~~~~~~~i~~~L~~~G~Vl~~h-v~~~~l~~~g~~~~~~~~~i~~~---d~~~i~~aD~vvA~l 76 (152)
T 4fyk_A 1 MRRSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEH-VADAELEPLGEEAAGGDQFIHEQ---NLNWLQQADVVVAEV 76 (152)
T ss_dssp --CEEEEECCSTTCCTTHHHHHHHHHHHTTTSEECCCC--------------CCCHHHHHHH---HHHHHHHCSEEEEEC
T ss_pred CCceEEEECCCCCcHHHHHHHHHHHHHHHHcCcccccc-cCchhhhhccccccCCHHHHHHH---HHHHHHHCCEEEEeC
Confidence 34566788999887665567889999887654 22211 1111110110 0112222221 112345667888875
Q ss_pred ---CchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchhhh
Q 017465 156 ---GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRS 195 (371)
Q Consensus 156 ---GDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlArs 195 (371)
..||.-|+-=+... ..|-+++..--++++++.-
T Consensus 77 ~~~d~Gt~~EiG~A~al-------gkPV~~l~~~~~~~~ls~m 112 (152)
T 4fyk_A 77 TQPSLGVGYELGRAVAL-------GKPILCLFRPQSGRVLSAM 112 (152)
T ss_dssp SSCCHHHHHHHHHHHHT-------TCCEEEEECGGGSCCCCHH
T ss_pred CCCCCCHHHHHHHHHHc-------CCeEEEEEeCCccchhHHH
Confidence 35999988655542 3456666665566666643
No 84
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=20.82 E-value=1.7e+02 Score=32.04 Aligned_cols=46 Identities=13% Similarity=0.123 Sum_probs=31.9
Q ss_pred CCcEEEEEcCchHHHHHHHHHhhcccCCCCCCCcEEEeeCCCccchh
Q 017465 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (371)
Q Consensus 147 ~~~~Ivv~GGDGTV~~Vln~L~~~~~~~~~~~~pigIIPlGTGNDlA 193 (371)
+-+.++++|||||..-+ ..|.+.........+|+--||-===||+.
T Consensus 688 ~Id~LvvIGGdgS~~~a-~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTAL-YELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp TCSEEEEEESHHHHHHH-HHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCCEEEEeCCchHHHHH-HHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 45899999999998654 45544211111136888899998899996
No 85
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=20.81 E-value=40 Score=29.02 Aligned_cols=33 Identities=12% Similarity=0.018 Sum_probs=27.3
Q ss_pred hhhhhhhhcCcce-EEeeccccccccchhhhhhH
Q 017465 15 SMIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (371)
Q Consensus 15 ~~~~~~~~~~~~~-~~~~~~~~r~~~~~p~yl~~ 47 (371)
.+|+..+..|..+ |||.-|..|+-.++..||..
T Consensus 116 ~~i~~~~~~~~~VlVHC~aG~~RSg~~v~~yL~~ 149 (195)
T 2q05_A 116 AFLSKCDQRNEPVLVHCAAGVNRSGAMILAYLMS 149 (195)
T ss_dssp HHHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEcCCCCChHHHHHHHHHHH
Confidence 4556666677777 99999999999999999875
Done!