BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017471
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FL12|DEGP9_ARATH Protease Do-like 9 OS=Arabidopsis thaliana GN=DEGP9 PE=2 SV=1
Length = 592
Score = 478 bits (1230), Expect = e-134, Method: Compositional matrix adjust.
Identities = 220/262 (83%), Positives = 244/262 (93%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +LTV DDEFWEGV PVEFG+LPALQDAVTVVGYPIGGDTISVTSGVVSR+EILSYV
Sbjct: 199 CDIALLTVTDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRMEILSYV 258
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED ENIGYVIPTPVI+HFI
Sbjct: 259 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDAENIGYVIPTPVIVHFI 318
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
QDYEK+ YTGFP+LG+EWQKMENPDLR +M M++ QKGVRIRR++PTAPES+VLKPSDI
Sbjct: 319 QDYEKHDKYTGFPVLGIEWQKMENPDLRKSMGMESHQKGVRIRRIEPTAPESQVLKPSDI 378
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
ILSFDG++IANDGTVPFRHGERIGFSYL+SQKYTGDSA VKVLR+ +IL FNI LA H+R
Sbjct: 379 ILSFDGVNIANDGTVPFRHGERIGFSYLISQKYTGDSALVKVLRNKEILEFNIKLAIHKR 438
Query: 281 LIPSHNKGRPPSYYIIAGFVFS 302
LIP+H G+PPSY+I+AGFVF+
Sbjct: 439 LIPAHISGKPPSYFIVAGFVFT 460
>sp|O82261|DEGP2_ARATH Protease Do-like 2, chloroplastic OS=Arabidopsis thaliana GN=DEGP2
PE=1 SV=2
Length = 607
Score = 317 bits (813), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 149/271 (54%), Positives = 196/271 (72%), Gaps = 1/271 (0%)
Query: 32 SATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVV 91
+ LV C +L+VE ++FW+G P+ G LP LQD+VTVVGYP+GGDTISVT GVV
Sbjct: 180 AKVLVRGVDCDIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVV 239
Query: 92 SRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVI 151
SRIE+ SY HGS++LLG+QIDAAIN GNSGGPAFND+G+C+G+AFQ + E+ ENIGYVI
Sbjct: 240 SRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEETENIGYVI 299
Query: 152 PTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPE 211
PT V+ HF+ DYE+NG YTG+P LGV QK+ENP LR + + ++ GV +RRV+PT+
Sbjct: 300 PTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNE-GVLVRRVEPTSDA 358
Query: 212 SEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNF 271
S+VLK D+I+SFD + + +GTVPFR ERI F YL+SQK+ GD A + ++R +
Sbjct: 359 SKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKV 418
Query: 272 NITLATHRRLIPSHNKGRPPSYYIIAGFVFS 302
+ L L+P H G PSY I+AG VF+
Sbjct: 419 QVVLRPRVHLVPYHIDGGQPSYIIVAGLVFT 449
>sp|Q9FIV6|DGP10_ARATH Protease Do-like 10, mitochondrial OS=Arabidopsis thaliana
GN=DEGP10 PE=2 SV=1
Length = 586
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 138/261 (52%), Positives = 179/261 (68%), Gaps = 3/261 (1%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L V+ + FWEG+ +E G++P LQ+AV VVGYP GGD ISVT GVVSR+E YV
Sbjct: 186 CDLAILVVDSEVFWEGMNALELGDIPFLQEAVAVVGYPQGGDNISVTKGVVSRVEPTQYV 245
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
HG+T+L+ +QIDAAIN GNSGGPA K G+AFQ+L ENIGY+IPTPVI HFI
Sbjct: 246 HGATQLMAIQIDAAINPGNSGGPAIMGN-KVAGVAFQNLS--GAENIGYIIPTPVIKHFI 302
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
E+ G Y GF +GV Q MEN +LR M ++ GV + +++P + ++LK D+
Sbjct: 303 NGVEECGKYIGFCSMGVSCQPMENGELRSGFQMSSEMTGVLVSKINPLSDAHKILKKDDV 362
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
+L+FDG+ IANDGTVPFR+ ERI F +LVS K ++A VKVLR+ K F+ITL +
Sbjct: 363 LLAFDGVPIANDGTVPFRNRERITFDHLVSMKKPDETALVKVLREGKEHEFSITLRPLQP 422
Query: 281 LIPSHNKGRPPSYYIIAGFVF 301
L+P H + PSYYI AGFVF
Sbjct: 423 LVPVHQFDQLPSYYIFAGFVF 443
>sp|Q9SHZ0|DEGP4_ARATH Protease Do-like 4, mitochondrial OS=Arabidopsis thaliana GN=DEGP4
PE=2 SV=1
Length = 518
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 164/261 (62%), Gaps = 3/261 (1%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L ++++EFWE ++P+E GE+P+L ++V V GYP GGD++S+T G VSR+E Y
Sbjct: 146 CDLAILEIDNEEFWEDMIPLELGEIPSLDESVAVFGYPTGGDSVSITKGYVSRVEYTRYA 205
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
HG T LL +Q DAAIN GNSGGPA K G+AFQ K +NIGY+IPTPVI HF+
Sbjct: 206 HGGTTLLAIQTDAAINPGNSGGPAIIGN-KMAGVAFQ--KDPSADNIGYIIPTPVIKHFL 262
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
E+NG Y GF L + +Q MEN LR M + G+ I ++P + + L+ DI
Sbjct: 263 TAVEENGQYGGFCTLDISYQLMENSQLRNHFKMGPEMTGILINEINPLSDAYKRLRKDDI 322
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
IL+ D + I ND V FR+ ERI F++ VS K ++ ++VLRD K F+I +
Sbjct: 323 ILAIDDVLIGNDAKVTFRNKERINFNHFVSMKKLDETVLLQVLRDGKEHEFHIMVKPVPP 382
Query: 281 LIPSHNKGRPPSYYIIAGFVF 301
L+P H + PSYYI AGFVF
Sbjct: 383 LVPGHQYDKLPSYYIFAGFVF 403
>sp|Q9SHZ1|DEGP3_ARATH Putative protease Do-like 3, mitochondrial OS=Arabidopsis thaliana
GN=DEGP3 PE=3 SV=1
Length = 559
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/261 (46%), Positives = 168/261 (64%), Gaps = 3/261 (1%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L +++D+FWEG+ P+E G++P++QD V VVGYP GGDTISV+ GVVSR+ + Y
Sbjct: 168 CDLAILEIDNDKFWEGMNPLELGDIPSMQDTVYVVGYPKGGDTISVSKGVVSRVGPIKYS 227
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
H TELL +QIDAAIN+GNSGGP K G+AF+SL + D +IGY+IPTPVI HF+
Sbjct: 228 HSGTELLAIQIDAAINNGNSGGPVIMG-NKVAGVAFESLCYSD--SIGYIIPTPVIRHFL 284
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
E++G F + + +QKM+N LR M G+ I +++P + +VLK DI
Sbjct: 285 NAIEESGEDVSFGSINLTYQKMDNDQLRKDFKMSDKMTGILINKINPLSDVHKVLKKDDI 344
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
IL+ DG+ I ND +V FR ERI F +LVS K ++A +KVLR+ K FN +L +
Sbjct: 345 ILAIDGVPIGNDSSVHFRKKERITFKHLVSMKKPCETALLKVLREGKEYEFNSSLKSVPP 404
Query: 281 LIPSHNKGRPPSYYIIAGFVF 301
L+P + SYYI G VF
Sbjct: 405 LVPKRQYDKSASYYIFGGLVF 425
>sp|Q9FM41|DGP13_ARATH Putative protease Do-like 13 OS=Arabidopsis thaliana GN=DEGP13 PE=2
SV=1
Length = 486
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 161/261 (61%), Gaps = 4/261 (1%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L +E EFWE + P+E G++P LQ++V V+GYP GG+ ISVT GVVSRIE + Y
Sbjct: 113 CDLAILVIESKEFWEDMNPLELGDMPFLQESVNVIGYPTGGENISVTKGVVSRIESMDYA 172
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
HG+ L +Q DAA+N GNSGGP K VG+AFQ+L H + NIG +IP PV+ HFI
Sbjct: 173 HGAINLPAIQTDAAMNPGNSGGPVC-IGNKVVGVAFQTLGHSN--NIGCLIPAPVVKHFI 229
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
EK G Y GF L + +Q M+ R M ++ G+ I ++ + +LK D+
Sbjct: 230 TGVEKTGQYVGFCSLNLSYQHMD-AQTRSHFKMNSEMTGILIYNINQHSDALNILKKYDV 288
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
ILS DG+ I NDGTV + ER LVS K G++ +K+LR+ K+ FNITL +R
Sbjct: 289 ILSIDGVAIENDGTVIIPNRERTRLDDLVSLKQLGETILLKILREGKMHEFNITLRPVQR 348
Query: 281 LIPSHNKGRPPSYYIIAGFVF 301
L+P+ PSYYI AGFVF
Sbjct: 349 LVPAGQIDNNPSYYIFAGFVF 369
>sp|Q9LK71|DGP11_ARATH Putative protease Do-like 11, mitochondrial OS=Arabidopsis thaliana
GN=DEGP11 PE=2 SV=2
Length = 560
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/261 (39%), Positives = 154/261 (59%), Gaps = 14/261 (5%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L ++ DEFW+G+ P+E G++P LQ+ V+VVG G+ I +T G+V R+E Y
Sbjct: 183 CDLAILEIDSDEFWKGMNPLELGDIPPLQEVVSVVG----GENICITKGLVLRVETRIYD 238
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160
+ ++LL +QIDA IN NSGGP K VG+ ++ IG+VIPTP+I HFI
Sbjct: 239 YSDSDLLSIQIDATINDENSGGPVIMG-NKVVGVVYE---------IGFVIPTPIIKHFI 288
Query: 161 QDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDI 220
+++ Y+ F L + +Q +EN +R M + G+ I +++ ++ ++L+ DI
Sbjct: 289 TSVQESRQYSCFGSLDLSYQSLENVQIRNHFKMSHEMTGILINKINSSSGAYKILRKDDI 348
Query: 221 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280
IL+ DG+ I ND VPF++ RI FSYLVS K G+ A VKVLR+ K +NI+L +
Sbjct: 349 ILAIDGVPIGNDEKVPFQNKRRIDFSYLVSMKKPGEKALVKVLRNGKEYEYNISLKPVKP 408
Query: 281 LIPSHNKGRPPSYYIIAGFVF 301
PSYYI GFVF
Sbjct: 409 NFTVQQFYNVPSYYIFGGFVF 429
>sp|Q9LK70|DGP12_ARATH Putative protease Do-like 12, mitochondrial OS=Arabidopsis thaliana
GN=DEGP12 PE=2 SV=1
Length = 499
Score = 176 bits (445), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 10/264 (3%)
Query: 38 ADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 97
A C +L ++ DEFW+G+ P+EFG++P L + V VVGYP G+TI VT GVV+ ++
Sbjct: 140 AHECDLAILEIDSDEFWKGMNPLEFGDIPPLNEIVYVVGYPKAGETICVTKGVVTGVKTG 199
Query: 98 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIM 157
+Y+ ST+LL + IDA GNSGGP K +G+ FQ L D ++ G VIPTP+I
Sbjct: 200 NYLRSSTKLLTIHIDATTYGGNSGGPVITG-DKVLGVLFQILG--DKKSTGVVIPTPIIR 256
Query: 158 HFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKP 217
HFI E++ F L + Q M+N +R M + G+ I +++ ++ ++L+
Sbjct: 257 HFITGAEESSHNAVFGSLVLSCQSMKNAQIRNHFKMSPETTGILINKINSSSGAHKILRK 316
Query: 218 SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
DIIL+ DG+ + ++ RI F++ +S K ++ VKVLR K +NI+L
Sbjct: 317 DDIILAIDGVPVLSE-------MRRISFNHFISMKKPDENILVKVLRKGKEHEYNISLKP 369
Query: 278 HRRLIPSHNKGRPPSYYIIAGFVF 301
+ I PSYYI GFVF
Sbjct: 370 VKPHIQVQQYYNLPSYYIFGGFVF 393
>sp|O34358|HTRA_BACSU Serine protease Do-like HtrA OS=Bacillus subtilis (strain 168)
GN=htrA PE=2 SV=2
Length = 449
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 32 SATLVTAD-ICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVV--GYPIGGD-TISVT 87
+A LV +D + +L + DD + FG+ L+ TV+ G P+G D + +VT
Sbjct: 198 TAKLVGSDSLTDLAVLQISDDHVTK---VANFGDSSDLRTGETVIAIGDPLGKDLSRTVT 254
Query: 88 SGVVSRIE---ILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDV 144
G+VS ++ +S G T + +Q DAAIN GNSGGP N GK VGI + +DV
Sbjct: 255 QGIVSGVDRTVSMSTSAGETSINVIQTDAAINPGNSGGPLLNTDGKIVGINSMKISEDDV 314
Query: 145 ENIGYVIPT----PVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGV 200
E IG+ IP+ P+ + + Y G +L +E + + + KGV
Sbjct: 315 EGIGFAIPSNDVKPIAEELLSKGQIERPYIGVSMLDLEQVPQNYQEGTLGLFGSQLNKGV 374
Query: 201 RIRRVDPTAP-ESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAA 259
IR V +P E LK DII+ G +I D R+ L GD+
Sbjct: 375 YIREVASGSPAEKAGLKAEDIIIGLKGKEI--DTGSELRN-------ILYKDAKIGDTVE 425
Query: 260 VKVLRDSKILNFNITL 275
VK+LR+ K + I L
Sbjct: 426 VKILRNGKEMTKKIKL 441
>sp|Q9R9I1|HTRB_BACSU Serine protease Do-like HtrB OS=Bacillus subtilis (strain 168)
GN=htrB PE=2 SV=1
Length = 458
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 22/229 (9%)
Query: 62 FGELPALQ--DAVTVVGYPIGGD-TISVTSGVVS---RIEILSYVHGSTELLGLQIDAAI 115
FG+ L+ + V +G P+G + +VT G++S R + G+ E+ LQ DAAI
Sbjct: 234 FGDSSQLRTGEKVIAIGNPLGQQFSGTVTQGIISGLNRTIDVDTTQGTVEMNVLQTDAAI 293
Query: 116 NSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLL 175
N GNSGGP N G+ +GI + VE++G+ IP+ + + +NG P L
Sbjct: 294 NPGNSGGPLINASGQVIGINSLKVSESGVESLGFAIPSNDVEPIVDQLLQNGKVD-RPFL 352
Query: 176 GVEWQKMEN-PDL--RVAMSMKADQ--KGVRIRRVDPTAP-ESEVLKPSDIILSFDGIDI 229
GV+ M P+ + + DQ KGV ++ V +P E +K D+I+ +G D+
Sbjct: 353 GVQMIDMSQVPETYQENTLGLFGDQLGKGVYVKEVQANSPAEKAGIKSEDVIVKLNGKDV 412
Query: 230 ANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 278
+ + R L GD ++VLR K N TL
Sbjct: 413 --ESSADIRQ-------ILYKDLKVGDKTTIQVLRKGKTKTLNATLTKQ 452
>sp|A6VUA4|DEGPL_MARMS Probable periplasmic serine endoprotease DegP-like OS=Marinomonas
sp. (strain MWYL1) GN=Mmwyl1_1102 PE=3 SV=1
Length = 469
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 44 TMLTVEDDEFWEGVLP-VEFGELPALQDA--VTVVGYPIGGDTISVTSGVVSRIEILSYV 100
+L +E D+ LP V+ G+ L+ V +G P G D +VT+G+VS +
Sbjct: 146 ALLKIEADD-----LPIVKMGDSDKLKPGQWVLAIGSPFGFD-YTVTAGIVSATG--RSL 197
Query: 101 HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ-SLKHEDVENIGYVIPTPVIMHF 159
+ +Q D AIN GNSGGP FN G+ VGI Q + + + IP+ V M
Sbjct: 198 PSDNYVPFIQTDVAINPGNSGGPLFNLDGEVVGINSQIYTRSGGFMGVSFAIPSKVAMSV 257
Query: 160 IQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQ-KGVRIRRVDPTAP-ESEVLKP 217
+ + +G + LGV Q + N +A S D+ G I RV P +P E LK
Sbjct: 258 VDQLKSDGKVS-RAWLGVLIQDVNN---ELAESFGLDRSNGALISRVLPDSPAEKAGLKS 313
Query: 218 SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
DIIL F+G IA+ G +P Y+V Q + KV RD K ++TL
Sbjct: 314 GDIILEFNGQSIAHSGELP----------YIVGQMKADEKVDAKVYRDGKEQTISVTL 361
>sp|P39668|YYXA_BACSU Uncharacterized serine protease YyxA OS=Bacillus subtilis (strain
168) GN=yyxA PE=3 SV=2
Length = 400
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 124/275 (45%), Gaps = 35/275 (12%)
Query: 25 LCSPSAPSATLVTAD-ICIYTMLTVEDDEFWEGVLPVEFGELPALQ--DAVTVVGYPIGG 81
L S SA LV +D + +L V+ D+ +FG ++ + V +G P+G
Sbjct: 141 LKDGSRVSADLVGSDQLMDLAVLRVKSDKIK---AVADFGNSDKVKSGEPVIAIGNPLGL 197
Query: 82 D-TISVTSGVVSRIE----ILSYVHGSTELLG--LQIDAAINSGNSGGPAFNDKGKCVGI 134
+ SVT GV+S E + S G + LQ DAAIN GNSGG N GK +GI
Sbjct: 198 EFAGSVTQGVISGTERAIPVDSNGDGQPDWNAEVLQTDAAINPGNSGGALLNMDGKVIGI 257
Query: 135 AFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME-------NPDL 187
+ VE IG IP+ +++ I+D E+ G P LG+E + + + L
Sbjct: 258 NSMKIAESAVEGIGLSIPSKLVIPVIEDLERYGKVK-RPFLGIEMKSLSDIASYHWDETL 316
Query: 188 RVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGIDIANDGTVPFRHGERIGFS 246
++ ++ G + VD +P + LK D+I FDG ++ + +
Sbjct: 317 KLPKNV---TNGAVVMGVDAFSPAGKAGLKELDVITEFDG----------YKVNDIVDLR 363
Query: 247 YLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRL 281
+ QK GD VK R K + +I L++ +L
Sbjct: 364 KRLYQKKVGDRVKVKFYRGGKEKSVDIKLSSADQL 398
>sp|Q9C691|DEGP6_ARATH Putative protease Do-like 6, chloroplastic OS=Arabidopsis thaliana
GN=DEGP6 PE=3 SV=2
Length = 219
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV 100
C +L ++ +EFWE + P+E G +P + + V +GYP GGDTISVT G+V+R+E Y
Sbjct: 129 CDLAILGIDSEEFWEDINPLELGGIPFIGETVYALGYPRGGDTISVTKGIVTRVEPQKYS 188
Query: 101 HGSTELLGLQIDAAINSGNSG 121
H S ++ + N SG
Sbjct: 189 HSSIKMYVYTSGGSTNKFYSG 209
>sp|Q2YX06|HTRAL_STAAB Serine protease HtrA-like OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=SAB0888 PE=3 SV=1
Length = 769
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS---RIEILSYVHGST-ELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S R ++ + + ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVLIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSSLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q2FI55|HTRAL_STAA3 Serine protease HtrA-like OS=Staphylococcus aureus (strain USA300)
GN=SAUSA300_0923 PE=3 SV=1
Length = 769
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q8NXB8|HTRAL_STAAW Serine protease HtrA-like OS=Staphylococcus aureus (strain MW2)
GN=MW0903 PE=3 SV=1
Length = 769
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q6GAJ1|HTRAL_STAAS Serine protease HtrA-like OS=Staphylococcus aureus (strain MSSA476)
GN=SAS0955 PE=3 SV=1
Length = 769
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q5HH63|HTRAL_STAAC Serine protease HtrA-like OS=Staphylococcus aureus (strain COL)
GN=SACOL1028 PE=3 SV=1
Length = 769
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q7A6C9|HTRAL_STAAN Serine protease HtrA-like OS=Staphylococcus aureus (strain N315)
GN=SA0879 PE=1 SV=1
Length = 769
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q99V70|HTRAL_STAAM Serine protease HtrA-like OS=Staphylococcus aureus (strain Mu50 /
ATCC 700699) GN=SAV1023 PE=3 SV=1
Length = 769
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|P73354|HTRA_SYNY3 Putative serine protease HtrA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=htrA PE=1 SV=1
Length = 452
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 31/237 (13%)
Query: 57 VLPVEFGELP--ALQDA--------VTVVGYPIGGDTISVTSGVVSRIEILSYVHG--ST 104
V+ +E G+LP AL D+ +G P+G D +VT+G++S S G
Sbjct: 222 VVKIEAGDLPTVALGDSDHLQVGEWAIAIGNPLGLDN-TVTTGILSATGRRSADIGVPDK 280
Query: 105 ELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164
+ +Q DAAIN GNSGGP N G+ +G+ + ++ + IG+ IP Q
Sbjct: 281 RVEFIQTDAAINPGNSGGPLLNADGQVIGMNTAII--QNAQGIGFAIPINKAQEIAQQLI 338
Query: 165 KNG----AYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPES-EVLKPSD 219
G AY G ++ + + M++ D KGV I +V P +P + L+ D
Sbjct: 339 ATGKVEHAYLGIQMVTMTPELQSQIRQETGMNIPVD-KGVVIMQVMPNSPAAIAKLEQGD 397
Query: 220 IILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 276
++ S G P + E++ LV + GD + +LR+ + N +T+
Sbjct: 398 VLQSLQG--------QPVENAEQV--QSLVGKLAVGDEVELGILRNGQQQNLTVTIG 444
>sp|Q2FZP2|HTRAL_STAA8 Serine protease HtrA-like OS=Staphylococcus aureus (strain NCTC
8325) GN=SAOUHSC_00958 PE=3 SV=2
Length = 769
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + ++D E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKDLETKGKI-DYPDVGVKMKNIVSLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLPGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|E1V4H2|DEGPL_HALED Probable periplasmic serine endoprotease DegP-like OS=Halomonas
elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 /
NCIMB 2198 / 1H9) GN=mucD PE=3 SV=1
Length = 474
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D SVTSG++S I + + +Q D AIN GNSGGP FN G+
Sbjct: 174 VAAIGSPFGLDH-SVTSGIISAIN--RTLPRDVYVPFIQTDVAINPGNSGGPLFNLDGEV 230
Query: 132 VGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVA 190
+GI Q + + + IP V M + D +N LGV Q + +A
Sbjct: 231 IGINSQIFTRSGGYMGLSFAIPIDVAMD-VADQLRNDGSVSRGWLGVMIQPVSR---ELA 286
Query: 191 MSMKADQ-KGVRIRRVDPTAPES-EVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYL 248
S D+ +G I +DP P + + LK D++L DG + + +P L
Sbjct: 287 DSFGMDKPQGALIADLDPDGPAARDGLKAGDVVLEVDGQTVDSSSALP----------RL 336
Query: 249 VSQKYTGDSAAVKVLRDSKILNFNITLA 276
+ + G+ +KVLR+ + N +T+
Sbjct: 337 IGRVSPGNDVELKVLRNGEHRNVTVTVG 364
>sp|Q6GI62|HTRAL_STAAR Serine protease HtrA-like OS=Staphylococcus aureus (strain MRSA252)
GN=SAR0992 PE=3 SV=1
Length = 769
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 21/213 (9%)
Query: 74 VVGYPIGGD-TISVTSGVVS----RIEILSYVHGSTELL--GLQIDAAINSGNSGGPAFN 126
VVG P+G D +VT G++S + I ++L QIDA++N GNSGG N
Sbjct: 566 VVGNPLGVDFKGTVTEGIISGLNRNVPIDFDKDNKYDMLMKAFQIDASVNPGNSGGAVVN 625
Query: 127 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKME--N 184
+GK +G+ + +VEN+ + IP + +++ E G +P +GV+ + + N
Sbjct: 626 REGKLIGVVAAKISMPNVENMSFAIPVNEVQKIVKELETKGKI-DYPDVGVKMKNIASLN 684
Query: 185 PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
R A+ + + GV + +VD + LK D+I DG + +D + FR +
Sbjct: 685 SFERQAVKLLGKVKNGVVVDQVDNNGLADQSGLKKGDVITELDGKLLEDD--LRFR---Q 739
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
I FS+ K S K+ RD K NI L
Sbjct: 740 IIFSHKDDLK----SITAKIYRDGKEKEINIKL 768
>sp|Q3E8B4|DGP15_ARATH Putative Do-like 15 protein OS=Arabidopsis thaliana GN=DEGP15 PE=3
SV=1
Length = 198
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 68 LQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND 127
+ + + +GYP GD ISVT G+V+R+E Y H S E+L +Q DA IN G SGGP
Sbjct: 123 IGETIYALGYPRDGDIISVTKGIVTRVEPQKYAHSSIEILTIQTDACINGGKSGGPVVMG 182
Query: 128 KGKCVGIAFQSLKHED 143
K G+ F++ D
Sbjct: 183 N-KVAGVVFENDSPSD 197
>sp|Q9Z4H7|HTRA_LACHE Serine protease Do-like HtrA OS=Lactobacillus helveticus GN=htrA
PE=3 SV=2
Length = 413
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 108/227 (47%), Gaps = 24/227 (10%)
Query: 61 EFGELPALQDAVTV--VGYPIGGDTIS-VTSGVVSR-IEILSYVHGSTELLGLQIDAAIN 116
+FG+ L+ TV VG P+G + S VT G++S +S G+ + + +Q DAAIN
Sbjct: 196 QFGDSKHLEAGQTVIAVGSPLGSEYASTVTQGIISAPARTISTSSGNQQTV-IQTDAAIN 254
Query: 117 SGNSGGPAFNDKGKCVGIA----FQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGF 172
GNSGG N G+ +GI QS VE + + IP+ ++ + + K G T
Sbjct: 255 PGNSGGALVNSAGQVIGINSMKLAQSSDGTSVEGMAFAIPSNEVVTIVNELVKKGKIT-R 313
Query: 173 PLLGVEWQKMEN-PD-LRVAMSMKADQK-GVRIRRVDPTAPESEV-LKPSDIILSFDGID 228
P LGV ++ P+ R + +K++ K G+ I V + +K D+I DG
Sbjct: 314 PQLGVRVIALQGIPEGYRSRLKIKSNLKNGIYIAFVSRNGSAANAGIKSGDVITKVDGKK 373
Query: 229 IANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
+ + V H S L S K GD+ V V R+ K ++ + L
Sbjct: 374 VED---VASLH------SILYSHK-VGDTVNVTVNRNGKDVDMKVKL 410
>sp|Q92JA1|DEGPL_RICCN Probable periplasmic serine endoprotease DegP-like OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=htrA PE=3
SV=2
Length = 508
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 112/240 (46%), Gaps = 31/240 (12%)
Query: 55 EGVLP-VEFGELPALQ--DAVTVVGYPIGGDTISVTSGVVSR------IEILSYVHGSTE 105
E LP VEFG+ + D V +G P G +VTSG++S I+ + V
Sbjct: 173 EEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDIDTDNIVDNF-- 230
Query: 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGI--AFQSLKHEDVENIGYVIPTPVIMHFIQDY 163
+Q DAAIN+GNSGGP FN K +G+ A S ++ IG+ IP+ I+
Sbjct: 231 ---IQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNI-GIGFAIPSNTAKPIIERL 286
Query: 164 EKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIIL 222
+K+G + LGV Q + D+ + +K + +GV + +V P + +K DII+
Sbjct: 287 KKDGKVS-RGRLGVTIQDL-TEDISEGLGLK-NTRGVLVAKVQEDGPGDKAGIKTGDIII 343
Query: 223 SFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLI 282
F +P ++ +++ +++ VK+LRD K L I + + +
Sbjct: 344 EF--------ADIPVKNTKKL--RVIIADAPIDQEVKVKILRDKKELELPIKITSDNEEV 393
>sp|P73940|HHOB_SYNY3 Putative serine protease HhoB OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoB PE=1 SV=1
Length = 416
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 27/220 (12%)
Query: 60 VEFGELPALQDA--VTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAAI 115
VE G+ LQ +G P+G D +VT G++S + S G + +Q DAAI
Sbjct: 195 VEIGQSDRLQPGEWAIAIGNPLGLDN-TVTVGIISALGRSSSEVGVPDKRVRFIQTDAAI 253
Query: 116 NSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLL 175
N GNSGGP N KG+ +G+ + D + +G+ IP + ++ G P L
Sbjct: 254 NPGNSGGPLLNAKGEVIGV--NTAIRADAQGLGFAIPIQTAQNVAENLFTKGKME-HPYL 310
Query: 176 GV-------EWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGI 227
G+ E K + + AD GV I +V P +P ++ L P DIIL G+
Sbjct: 311 GIHMVTLTPEMTKQLRTSGELPAGVTAD-TGVLIIQVSPGSPAAQAGLAPGDIILEVGGM 369
Query: 228 DIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267
+ V ER+ S + G+ A+ V R K
Sbjct: 370 GVKTATDV----QERVEVSQI------GEPLAIAVKRGQK 399
>sp|A4XSC0|DEGPL_PSEMY Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
mendocina (strain ymp) GN=Pmen_1471 PE=3 SV=1
Length = 474
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 72 VTVVGYPIGGDTISVTSGVVS----RIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND 127
V +G P G D SVT+G+VS + SYV +Q D AIN GNSGGP FN
Sbjct: 171 VLAIGSPFGFDH-SVTAGIVSAKGRNLPSDSYVPF------IQTDVAINPGNSGGPLFNL 223
Query: 128 KGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENP 185
KG+ VGI Q + + + IP V + + + +G T G+ LGV Q++ N
Sbjct: 224 KGEVVGINSQIFTRSGGFMGLSFAIPMEVALQVSEQLKADGKVTRGW--LGVVIQEV-NK 280
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGF 245
DL + + + + ++ + L+ D+ILS +G I +P
Sbjct: 281 DLAESFGLDRPAGALVAQVLEDGPADKGGLQVGDVILSLNGKPIVMSADLP--------- 331
Query: 246 SYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
+LV G+ A + V+RD +T+ T
Sbjct: 332 -HLVGGLKPGEKAEMDVVRDGSRKKLKVTIGT 362
>sp|B0KV30|DEGPL_PSEPG Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain GB-1) GN=PputGB1_4377 PE=3 SV=1
Length = 477
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D SVT G+VS + T + +Q D AIN GNSGGP FN KG+
Sbjct: 175 VLAIGSPFGFDH-SVTKGIVSAKG--RTLPNDTYVPFIQTDVAINPGNSGGPLFNMKGEV 231
Query: 132 VGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENPDLRV 189
VGI Q + + + IP V + +K+G + G+ LGV Q++ N DL
Sbjct: 232 VGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDL-- 286
Query: 190 AMSMKADQ-KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSY 247
A S D+ G + +V P ++ L+ D+ILS +G I +P +
Sbjct: 287 AESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------H 336
Query: 248 LVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
LV G+ A ++++R+ K N +I++
Sbjct: 337 LVGGLKDGEKAKLEIIRNGKRQNLDISVGA 366
>sp|A5W8F5|DEGPL_PSEP1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain F1 / ATCC 700007) GN=Pput_4291 PE=3 SV=1
Length = 477
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D SVT G+VS + T + +Q D AIN GNSGGP FN KG+
Sbjct: 175 VLAIGSPFGFDH-SVTKGIVSAKG--RTLPNDTYVPFIQTDVAINPGNSGGPLFNMKGEV 231
Query: 132 VGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENPDLRV 189
VGI Q + + + IP V + +K+G + G+ LGV Q++ N DL
Sbjct: 232 VGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDL-- 286
Query: 190 AMSMKADQ-KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSY 247
A S D+ G + +V P ++ L+ D+ILS +G I +P +
Sbjct: 287 AESFGLDKPAGALVAQVLENGPAAKGGLQVGDVILSMNGQPIVMSADLP----------H 336
Query: 248 LVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
LV G+ A ++++R+ K N +I++
Sbjct: 337 LVGGLKDGEKAKLEIIRNGKRQNLDISVGA 366
>sp|Q2SL36|DEGPL_HAHCH Probable periplasmic serine endoprotease DegP-like OS=Hahella
chejuensis (strain KCTC 2396) GN=mucD PE=3 SV=1
Length = 469
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 34/245 (13%)
Query: 57 VLPVEFGELPALQ----------DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTEL 106
VL VE +LP L + V +G P G + +VT+G+VS + +
Sbjct: 141 VLKVEADDLPVLNLGKSSELKVGEWVVAIGSPFGFE-YTVTAGIVSAKG--RSLPNENYV 197
Query: 107 LGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ-SLKHEDVENIGYVIPTPVIMHFIQDYEK 165
+Q D AIN GNSGGP FN +G+ VGI Q + + + IP V + + +
Sbjct: 198 PFIQTDVAINPGNSGGPLFNLEGEVVGINSQIYTRSGGFMGVSFAIPIDVALDVMNQLKD 257
Query: 166 NGAYT-GFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILS 223
GA G+ LGV Q++ N DL + ++ +G + +V +P + L+P D+I+S
Sbjct: 258 TGAVKRGW--LGVLIQEV-NKDLAESFNLNK-PRGALVAQVMKGSPADKAGLQPGDVIVS 313
Query: 224 FDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIP 283
++G +I +P +LV + G A++KV+R ++ + + +P
Sbjct: 314 YNGNEIGLSSELP----------HLVGRTSPGQKASMKVVRRGDEMDVAVEIGQ----LP 359
Query: 284 SHNKG 288
+ + G
Sbjct: 360 ADDNG 364
>sp|Q4KGQ4|DEGPL_PSEF5 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fluorescens (strain Pf-5 / ATCC BAA-477) GN=mucD PE=1
SV=1
Length = 476
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D +VT G+VS I + + +Q D IN GNSGGP FN G+
Sbjct: 174 VVAIGSPFGFDH-TVTQGIVSAIG--RSLPNENYVPFIQTDVPINPGNSGGPLFNLAGEV 230
Query: 132 VGIAFQ-SLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVA 190
VGI Q + + + IP V M + + K G LGV Q++ N DL +
Sbjct: 231 VGINSQIYTRSGGFMGVSFAIPIDVAMD-VSNQLKTGGKVSRGWLGVVIQEV-NKDLAES 288
Query: 191 MSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249
++ G + ++ P ++ L+ D+ILS +G I +P +LV
Sbjct: 289 FGLEK-PAGALVAQIQDDGPAAKGGLQVGDVILSLNGQPIVMSADLP----------HLV 337
Query: 250 SQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNK 287
G A ++V+RD K N +T+ IP +K
Sbjct: 338 GALKAGAKANLEVIRDGKRKNVELTVGA----IPEEDK 371
>sp|P72780|HHOA_SYNY3 Putative serine protease HhoA OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=hhoA PE=1 SV=1
Length = 394
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 75 VGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCV 132
VG P+G D +VT G++S + + G + +Q DAAIN GNSGGP N +G+ +
Sbjct: 191 VGNPVGLDN-TVTLGIISTLGRSAAQAGIPDKRVEFIQTDAAINPGNSGGPLLNARGEVI 249
Query: 133 GIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVE---------WQKME 183
GI + D IG+ IP IQ+ G P +GV+ Q
Sbjct: 250 GI--NTAIRADATGIGFAIPIDQ-AKAIQNTLAAGGTVPHPYIGVQMMNITVDQAQQNNR 306
Query: 184 NPDLRVAMSMKADQKGVRIRRVDPTAP-ESEVLKPSDIILSFDGIDIANDGTVPFRHGER 242
NP+ + + + G+ + RV P P E ++ D+I++ DG P G R
Sbjct: 307 NPN---SPFIIPEVDGILVMRVLPGTPAERAGIRRGDVIVAVDG--------TPISDGAR 355
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 279
+ +V Q + + +LR + L+ + A R
Sbjct: 356 L--QRIVEQAGLNKALKLDLLRGDRRLSLTVQTAQLR 390
>sp|Q3E6S8|DGP14_ARATH Putative protease Do-like 14 OS=Arabidopsis thaliana GN=DEGP14 PE=3
SV=2
Length = 429
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 70 DAVTVVGYPIGGDTISVTSGVVSRIEILS--YVHGSTELLGLQIDAAINSGNSGGPAFND 127
D V VG P+ +VT+G+VS ++ S G LQ D +IN+GNSGGP N
Sbjct: 230 DWVIAVGCPLSLQN-TVTAGIVSCVDRKSSDLGLGGKHREYLQTDCSINAGNSGGPLVNL 288
Query: 128 KGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDL 187
G+ +G+ + D +G+ +P + I+ ++K+G P +G++ ++ N L
Sbjct: 289 DGEVIGVNIMKVLAAD--GLGFSVPIDSVSKIIEHFKKSGRVI-RPWIGLKMVELNN--L 343
Query: 188 RVAMSMKAD------QKGVRIRRVDPTAPESEV-LKPSDIILSFDG---IDIANDGTVPF 237
VA + D ++GV + V P +P KP D+++ FDG I+I +D
Sbjct: 344 IVAQLKERDPMFPDVERGVLVPTVIPGSPADRAGFKPGDVVVRFDGKPVIEIMDD----- 398
Query: 238 RHGERI 243
R G+R+
Sbjct: 399 RVGKRM 404
>sp|B1J4D7|DEGPL_PSEPW Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
putida (strain W619) GN=PputW619_1070 PE=3 SV=1
Length = 479
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D SVT G+VS + T + +Q D AIN GNSGGP FN G+
Sbjct: 175 VLAIGSPFGFDH-SVTKGIVSAKG--RTLPNDTYVPFIQTDVAINPGNSGGPLFNMNGEV 231
Query: 132 VGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENPDLRV 189
VGI Q + + + IP V + +K+G + G+ LGV Q++ N DL
Sbjct: 232 VGINSQIFTRSGGFMGLSFAIPIDVAIDVSNQLKKDGKVSRGW--LGVVIQEV-NKDL-- 286
Query: 190 AMSMKADQ-KGVRIRRVDPTAPESEV-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSY 247
A S D+ G + +V P ++ L+ D+ILS +G I +P +
Sbjct: 287 AESFGLDKPAGALVAQVLEDGPAAKSGLQVGDVILSMNGQPIVMSADLP----------H 336
Query: 248 LVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
LV G A ++++R+ K N ++T+
Sbjct: 337 LVGTLKAGAKAKLEIIRNGKRQNLDVTIGA 366
>sp|Q49WF1|HTRAL_STAS1 Serine protease HtrA-like OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1763
PE=3 SV=1
Length = 597
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 68 LQDAVTVVGYPIGGD-TISVTSGVVSR------IEILSYVHGSTELLGLQIDAAINSGNS 120
L + + VVG P+G D SV+ G+VS ++I + Q+DA +N GNS
Sbjct: 388 LGEPIIVVGNPLGVDFKGSVSEGIVSGLNRHVPVDIDKDNQYDVLMSAFQMDAPVNPGNS 447
Query: 121 GGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQ 180
GG + GK +GIA + + VE I + IP + E G +P G++
Sbjct: 448 GGGVIDKNGKLIGIASLKIDMDHVEGIAFAIPVNDAESIAKQLEAKGEVK-YPNTGIKIA 506
Query: 181 KMENPDLRVAMSMKADQ---KGVRIRRV-DPTAPESEVLKPSDIILSFDGIDIANDGTVP 236
+++ D S+ + KGV I V D + E L+ +D+I+ DG ++ + +
Sbjct: 507 NVKDMDEATHQSLNLPEEVNKGVVIGDVKDNSLGEKSGLQKNDVIVELDGKEVED--NLR 564
Query: 237 FRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
+R +I FS+ K D+ K+ RD K + I L
Sbjct: 565 YR---QIIFSH----KDDLDTLPAKIYRDGKEQDIKIKL 596
>sp|P0C0V0|DEGP_ECOLI Periplasmic serine endoprotease DegP OS=Escherichia coli (strain
K12) GN=degP PE=1 SV=1
Length = 474
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 70 DAVTVVGYPIG-GDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 128
D +G P G G+T VTSG+VS + + E +Q DAAIN GNSGG N
Sbjct: 188 DYTVAIGNPFGLGET--VTSGIVSALGRSGLNAENYENF-IQTDAAINRGNSGGALVNLN 244
Query: 129 GKCVGIAFQSLKHEDVE-NIGYVIPTPVIMHFIQDYEKNGAYTGFPL--LGVEWQKMENP 185
G+ +GI L + IG+ IP+ ++ + + G L +G E N
Sbjct: 245 GELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTEL----NS 300
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGIDIANDGTVPFRHGERIG 244
+L AM + A Q+G + +V P + ++ +K D+I S +G I++
Sbjct: 301 ELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS------------- 346
Query: 245 FSYLVSQKYT---GDSAAVKVLRDSKILNFNITL 275
F+ L +Q T G + +LRD K +N N+ L
Sbjct: 347 FAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLEL 380
>sp|P0C0V1|DEGP_ECO57 Periplasmic serine endoprotease DegP OS=Escherichia coli O157:H7
GN=degP PE=3 SV=1
Length = 474
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 70 DAVTVVGYPIG-GDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 128
D +G P G G+T VTSG+VS + + E +Q DAAIN GNSGG N
Sbjct: 188 DYTVAIGNPFGLGET--VTSGIVSALGRSGLNAENYENF-IQTDAAINRGNSGGALVNLN 244
Query: 129 GKCVGIAFQSLKHEDVE-NIGYVIPTPVIMHFIQDYEKNGAYTGFPL--LGVEWQKMENP 185
G+ +GI L + IG+ IP+ ++ + + G L +G E N
Sbjct: 245 GELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTEL----NS 300
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGIDIANDGTVPFRHGERIG 244
+L AM + A Q+G + +V P + ++ +K D+I S +G I++
Sbjct: 301 ELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISS------------- 346
Query: 245 FSYLVSQKYT---GDSAAVKVLRDSKILNFNITL 275
F+ L +Q T G + +LRD K +N N+ L
Sbjct: 347 FAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLEL 380
>sp|P05676|Y938_SYNP6 Uncharacterized serine protease syc0938_d OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=syc0938_d PE=3 SV=2
Length = 406
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 74 VVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKC 131
+G P+G D +VT G+VS + S G L +Q DA IN GNSGGP N +G+
Sbjct: 203 AIGNPLGLDN-TVTLGIVSSLGRRSSAVGIPDKRLDFIQTDAVINPGNSGGPLVNSRGEV 261
Query: 132 VGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNG----AYTGFPLLGVEWQ--KMENP 185
+GI +++ IG+ IP KNG +Y G LL + Q + N
Sbjct: 262 IGIN-TAIRQAPGAGIGFAIPVNTAKQIETQLLKNGKVSHSYLGVQLLSLTPQMARDNNR 320
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDG--IDIANDGTVPFRHGER 242
D + + Q GV I V AP + L+ D++++ DG + A++
Sbjct: 321 DPNSTVRLPEVQ-GVLIMGVQRNAPAATAGLRRGDVVIATDGQAVTTADE---------- 369
Query: 243 IGFSYLVSQKYTGDSAAVKVLRDSK 267
F V G S + V+RD
Sbjct: 370 --FQRRVEASQVGQSLNLSVIRDGN 392
>sp|Q48EU9|DEGPL_PSE14 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
syringae pv. phaseolicola (strain 1448A / Race 6)
GN=mucD PE=3 SV=1
Length = 479
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 72 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKC 131
V +G P G D SVT G+VS + T + +Q D AIN GNSGGP FN G+
Sbjct: 177 VLAIGSPFGFDH-SVTKGIVSAKG--RSLPNDTYVPFIQTDVAINPGNSGGPLFNMAGEV 233
Query: 132 VGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENPDLRV 189
VGI Q + + + IP V M + +G + G+ LGV Q++ N DL
Sbjct: 234 VGINSQIFTRSGGFMGLSFAIPIDVAMDVANQLKASGKVSRGW--LGVVIQEV-NKDL-- 288
Query: 190 AMSMKADQ-KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSY 247
A S D+ G + +V P ++ L+ D+ILS +G I +P +
Sbjct: 289 AESFGLDKPAGALVAQVLEDGPAAKGGLQVGDVILSANGQPIIMSADLP----------H 338
Query: 248 LVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
L+ G A ++V+RD K +T+
Sbjct: 339 LIGNLKDGSKAELEVIRDGKRQKLTVTVGA 368
>sp|O22609|DEGP1_ARATH Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1
PE=1 SV=2
Length = 439
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 72 VTVVGYPIGGDTISVTSGVVS--RIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKG 129
V +G P G D ++T+GV+S R EI S G +Q DAAIN GNSGGP + G
Sbjct: 233 VFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSG 291
Query: 130 KCVGIAFQSLKHEDVEN-IGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLR 188
+GI + +G+ IP + + + G T P+LG+++ PD
Sbjct: 292 TLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFA----PDQS 346
Query: 189 VAMSMKADQKGVRIRRVDPTAPESEV------------LKPSDIILSFDGIDIANDGTVP 236
V + GV + P+ P + L DII S +G ++N G+
Sbjct: 347 VE---QLGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSN-GSDL 402
Query: 237 FRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275
+R ++ Q GD V+VLR ++TL
Sbjct: 403 YR---------ILDQCKVGDEVTVEVLRGDHKEKISVTL 432
>sp|P45129|HTOA_HAEIN Probable periplasmic serine protease do/HhoA-like OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=HI_1259 PE=3 SV=1
Length = 466
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 90/188 (47%), Gaps = 15/188 (7%)
Query: 70 DAVTVVGYPIG-GDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 128
D +G P G G T VTSG+VS + + T +Q DAA+N GNSGG N
Sbjct: 177 DFTVAIGNPFGLGQT--VTSGIVSALGRSTGSDSGTYENYIQTDAAVNRGNSGGALVNLN 234
Query: 129 GKCVGI--AFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPD 186
G+ +GI A S + I + IP+ + +Q + G LLG++ ++ N D
Sbjct: 235 GELIGINTAIISPSGGNA-GIAFAIPSNQASNLVQQILEFGQVR-RGLLGIKGGEL-NAD 291
Query: 187 LRVAMSMKADQKGVRIRRVDP-TAPESEVLKPSDIILSFDGIDIANDGTVPFR-----HG 240
L A ++ A Q+G + V P +A E LK DII + +G I++ + + G
Sbjct: 292 LAKAFNVSA-QQGAFVSEVLPKSAAEKAGLKAGDIITAMNGQKISSFAEIRAKIATTGAG 350
Query: 241 ERIGFSYL 248
+ I +YL
Sbjct: 351 KEISLTYL 358
>sp|P26982|DEGP_SALTY Periplasmic serine endoprotease DegP OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=degP PE=3 SV=1
Length = 475
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 70 DAVTVVGYPIG-GDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDK 128
D +G P G G+T VTSG+VS + + E +Q DAAIN GNSGG N
Sbjct: 189 DYTVAIGNPFGLGET--VTSGIVSALGRSGLNVENYENF-IQTDAAINRGNSGGALVNLN 245
Query: 129 GKCVGIAFQSLKHEDVE-NIGYVIPTPVIMHFIQDYEKNGAYT--GFPLLGVEWQKMENP 185
G+ +GI L + IG+ IP+ ++ + + G ++G E N
Sbjct: 246 GELIGINTAILAPDGGNIGIGFAIPSNMVKNLTSQMVEYGQVKRGELGIMGTEL----NS 301
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGIDIANDGTVPFRHGERIG 244
+L AM + A Q+G + +V P + ++ +K D+I S +G I++
Sbjct: 302 ELAKAMKVDA-QRGAFVSQVMPNSSAAKAGIKAGDVITSLNGKPISS------------- 347
Query: 245 FSYLVSQKYT---GDSAAVKVLRDSKILNFNITL 275
F+ L +Q T G ++ +LR+ K + N+ L
Sbjct: 348 FAALRAQVGTMPVGSKISLGLLREGKAITVNLEL 381
>sp|Q4L530|HTRAL_STAHJ Serine protease HtrA-like OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=SH1936 PE=3 SV=1
Length = 639
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 55 EGVLPVEFGELPALQ--DAVTVVGYPIGGD-TISVTSGVVSRIE-----ILSYVHGSTEL 106
+ + P++ G L+ +++ VVG P+G D +VT G++S + + + E
Sbjct: 415 KNMQPIKIGHSKHLKLGESILVVGNPLGNDFKNTVTKGIISGLNRAVPVDFDKDNKNDEW 474
Query: 107 LG-LQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 165
+ QIDA++N GNSGG N G+ VG+ + ++E +G+ IP ++ EK
Sbjct: 475 VNTFQIDASVNPGNSGGAVVNRVGELVGLVSLKINMPNIEGMGFAIPIDAAREIAEELEK 534
Query: 166 NGAYTGFPLLGVEWQKMEN--PDLRVAMSMKAD-QKGVRIRRVDPTA-PESEVLKPSDII 221
G +P G+ + + + P R + + D Q G+ + ++ + LK D++
Sbjct: 535 KGEIQ-YPNTGIGIKNVSDLMPYERNLLKVPEDVQNGIVVEKLKENGLGKKSGLKIGDVV 593
Query: 222 LSFDGIDIAND 232
+ D I N+
Sbjct: 594 VELDSKSIQNN 604
>sp|F6AA62|DEGPL_PSEF1 Probable periplasmic serine endoprotease DegP-like OS=Pseudomonas
fulva (strain 12-X) GN=Psefu_3239 PE=3 SV=1
Length = 479
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 96/213 (45%), Gaps = 28/213 (13%)
Query: 72 VTVVGYPIGGDTISVTSGVVS----RIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND 127
V +G P G D SVT+G+VS + SYV +Q D AIN GNSGGP FN
Sbjct: 176 VLAIGSPFGFDH-SVTAGIVSAKGRSLPNESYVPF------IQTDVAINPGNSGGPLFNL 228
Query: 128 KGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEKNGAYT-GFPLLGVEWQKMENP 185
G+ VGI Q + + + IP V M + +G + G+ LGV Q++ N
Sbjct: 229 DGEVVGINSQIFTRSGGFMGLSFAIPMSVAMDVADQLKASGKVSRGW--LGVVIQEV-NK 285
Query: 186 DLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIG 244
DL + ++ G + +V P ++ L+ D+ILS DG I +P
Sbjct: 286 DLAESFGLE-KPAGALVAQVLEDGPAAKGGLQVGDVILSLDGKPIIMSADLP-------- 336
Query: 245 FSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
+LV G A ++++R+ + + T
Sbjct: 337 --HLVGALKPGTKANLEIVREGSRKTLKVAVGT 367
>sp|P83105|HTRA4_HUMAN Serine protease HTRA4 OS=Homo sapiens GN=HTRA4 PE=2 SV=1
Length = 476
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 77/162 (47%), Gaps = 27/162 (16%)
Query: 85 SVTSGVVSRIEILSYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE 142
+ T+G+VS + G +++ +QIDA IN GNSGGP N G +G+ SL+
Sbjct: 289 TATAGIVSTKQRGGKELGMKDSDMDYVQIDATINYGNSGGPLVNLDGDVIGV--NSLRVT 346
Query: 143 DVENIGYVIPTPVIMHFIQDYEK---------NGAYTGFPLLGV-----EWQKMENPDLR 188
D I + IP+ + F+ +Y + N Y G +L + E KM PD
Sbjct: 347 D--GISFAIPSDRVRQFLAEYHEHQMKGKAFSNKKYLGLQMLSLTVPLSEELKMHYPDFP 404
Query: 189 VAMSMKADQKGVRI-RRVDPTAPESEVLKPSDIILSFDGIDI 229
S GV + + V+ TA +S L+ D+I++ +G I
Sbjct: 405 DVSS------GVYVCKVVEGTAAQSSGLRDHDVIVNINGKPI 440
>sp|O05942|DEGPL_RICPR Probable periplasmic serine endoprotease DegP-like OS=Rickettsia
prowazekii (strain Madrid E) GN=htrA PE=3 SV=2
Length = 513
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 21/182 (11%)
Query: 55 EGVLP-VEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSR------IEILSYVHGSTE 105
E LP VEFG+ + D V +G P G +VTSG++S ++ + V
Sbjct: 178 EEPLPFVEFGDSNDARVGDWVIAIGNPFGNLGGTVTSGIISSKGRDIDVDTDNIVDNF-- 235
Query: 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGI--AFQSLKHEDVENIGYVIPTPVIMHFIQDY 163
+Q DAAIN+GNSGGP FN K +G+ A S ++ IG+ IP+ I+
Sbjct: 236 ---IQTDAAINNGNSGGPMFNLDQKVIGVNTAIFSPLGTNI-GIGFAIPSNTAKPIIERL 291
Query: 164 EKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIIL 222
+K+G + LGV Q + ++ + K GV + +V P + +K DII+
Sbjct: 292 KKDGKVS-RGRLGVTIQDL-TEEISEVLGFKG-TNGVLVSKVQENGPGYKAGIKKGDIII 348
Query: 223 SF 224
F
Sbjct: 349 KF 350
>sp|O85291|DEGPL_BUCAP Probable periplasmic serine endoprotease DegP-like OS=Buchnera
aphidicola subsp. Schizaphis graminum (strain Sg)
GN=htrA PE=3 SV=1
Length = 478
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 70 DAVTVVGYPIG-GDTISVTSGVVSRI--EILSYVHGSTELLGLQIDAAINSGNSGGPAFN 126
D +G P G G+T VTSG++S + L+ H + Q DAAIN GNSGG N
Sbjct: 190 DYTVAIGNPYGLGET--VTSGIISALGRSGLNIEHYENFI---QTDAAINRGNSGGALVN 244
Query: 127 DKGKCVGIAFQSLKHEDVE-NIGYVIPTPVIMHFIQDYEKNGAYT--GFPLLGVEWQKME 183
KG+ +GI L + IG+ IP ++ + + K G ++G+E
Sbjct: 245 LKGELIGINTAILAPDGGNIGIGFAIPGNMVKNLTEQMVKFGQVKRGELGIIGMEL---- 300
Query: 184 NPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFD 225
N DL M + A QKG + +V P + +K DII+S +
Sbjct: 301 NSDLAHVMKINA-QKGAFVSQVLPNSSAFHAGIKAGDIIVSLN 342
>sp|P0A3Z5|DEGPL_BRUSU Probable periplasmic serine endoprotease DegP-like OS=Brucella suis
biovar 1 (strain 1330) GN=htrA PE=3 SV=1
Length = 513
Score = 52.0 bits (123), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 106/230 (46%), Gaps = 36/230 (15%)
Query: 60 VEFGELPALQ--DAVTVVGYPIG-GDTISVTSGVVSRIEILSYVHGSTELLG-----LQI 111
V FG+ ++ D V VG P G G T VTSG+VS G G +QI
Sbjct: 198 VAFGDDNKVRVGDWVVAVGNPFGLGGT--VTSGIVS-------ARGRDIGAGPYDDFIQI 248
Query: 112 DAAINSGNSGGPAFNDKGKCVGI--AFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAY 169
DAA+N GNSGGPAF+ G+ +GI A S V I + IP+ + K G+
Sbjct: 249 DAAVNKGNSGGPAFDLSGEVIGINTAIFSPSGGSV-GIAFAIPSSTAKQVVDQLIKKGSV 307
Query: 170 T-GFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEV-LKPSDIILSFDGI 227
G+ +GV+ Q + D+ ++ + A++KG + P ++ +K D+I + +G
Sbjct: 308 ERGW--IGVQIQPVTK-DIAASLGL-AEEKGAIVASPQDDGPAAKAGIKAGDVITAVNGE 363
Query: 228 DIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277
+ + + V+ G+ AA+ V R +K N+T+A
Sbjct: 364 TVQ----------DPRDLARKVANIAPGEKAALTVWRKNKAEEINVTIAA 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,324,508
Number of Sequences: 539616
Number of extensions: 5875629
Number of successful extensions: 13819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 13585
Number of HSP's gapped (non-prelim): 232
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)