Query 017471
Match_columns 371
No_of_seqs 416 out of 3016
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 14:58:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017471.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017471hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 1.6E-57 5.4E-62 461.6 33.5 339 3-342 64-439 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 1.8E-45 6.3E-50 368.1 28.0 310 4-342 54-387 (436)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.3E-46 4.5E-51 377.6 17.2 310 8-342 72-410 (451)
4 3stj_A Protease DEGQ; serine p 100.0 8.4E-45 2.9E-49 352.8 22.9 260 4-281 54-337 (345)
5 1ky9_A Protease DO, DEGP, HTRA 100.0 1.9E-44 6.5E-49 361.6 12.6 303 10-344 83-409 (448)
6 1te0_A Protease DEGS; two doma 100.0 3.5E-41 1.2E-45 324.1 17.6 252 10-279 39-316 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 2E-39 6.7E-44 315.7 18.8 248 12-280 52-335 (348)
8 1lcy_A HTRA2 serine protease; 100.0 1.5E-38 5.2E-43 306.6 16.9 250 5-277 39-323 (325)
9 1y8t_A Hypothetical protein RV 100.0 1.5E-37 5E-42 299.6 22.4 233 21-280 67-316 (324)
10 3num_A Serine protease HTRA1; 100.0 5E-38 1.7E-42 303.9 12.9 254 4-280 37-324 (332)
11 1l1j_A Heat shock protease HTR 99.9 8.7E-26 3E-30 208.3 12.4 162 12-177 55-239 (239)
12 3sti_A Protease DEGQ; serine p 99.9 4.9E-26 1.7E-30 210.6 10.0 165 4-174 54-241 (245)
13 3lgi_A Protease DEGS; stress-s 99.9 5.3E-24 1.8E-28 196.0 12.0 161 8-174 48-233 (237)
14 3tjo_A Serine protease HTRA1; 99.9 3.9E-22 1.3E-26 182.9 10.3 150 8-165 58-230 (231)
15 2l97_A HTRA, putative serine p 99.9 4.3E-22 1.5E-26 167.5 9.4 124 145-279 2-128 (134)
16 3k6y_A Serine protease, possib 99.8 2E-19 6.7E-24 165.3 15.6 152 11-169 56-230 (237)
17 2w5e_A Putative serine proteas 99.7 6.5E-17 2.2E-21 140.1 11.3 107 26-153 50-156 (163)
18 2h5c_A Alpha-lytic protease; s 99.6 2.3E-15 7.9E-20 134.6 14.5 126 28-160 48-191 (198)
19 2pzd_A Serine protease HTRA2; 99.6 2E-15 6.7E-20 122.7 7.2 97 167-278 1-103 (113)
20 2p3w_A Probable serine proteas 99.6 2.2E-15 7.4E-20 122.3 5.6 98 167-279 1-104 (112)
21 2as9_A Serine protease; trypsi 99.6 2.5E-14 8.5E-19 128.7 12.6 128 27-164 62-202 (210)
22 2oua_A Serine protease, protei 99.4 1.6E-12 5.5E-17 115.1 14.2 122 30-159 48-181 (188)
23 3rle_A Golgi reassembly-stacki 99.4 2.6E-13 8.8E-18 122.2 8.2 120 196-342 14-137 (209)
24 1hpg_A Glutamic acid specific 99.4 2.7E-12 9.4E-17 113.5 14.1 121 31-159 50-181 (187)
25 3i18_A LMO2051 protein; alpha- 99.4 7.2E-13 2.5E-17 105.2 9.3 75 196-280 5-79 (100)
26 2i4s_A General secretion pathw 99.4 4.8E-13 1.6E-17 107.2 6.9 100 154-275 5-105 (105)
27 2vz5_A TAX1-binding protein 3; 99.4 1.6E-13 5.5E-18 115.7 4.3 102 164-277 30-135 (139)
28 2ea3_A Chymotrypsin; celloulom 99.4 2.4E-12 8.1E-17 114.1 11.6 122 32-159 45-175 (189)
29 1w9e_A Syntenin 1; cell adhesi 99.3 3.1E-12 1.1E-16 110.7 10.2 115 172-342 15-131 (166)
30 2kl1_A YLBL protein; structure 99.3 8.1E-13 2.8E-17 103.7 5.0 74 196-279 3-76 (94)
31 2kjp_A Uncharacterized protein 99.3 1.7E-13 5.9E-18 107.0 0.9 72 198-279 1-72 (91)
32 2vid_A Serine protease SPLB; h 99.3 5.3E-12 1.8E-16 112.2 10.2 122 32-163 67-201 (204)
33 2w7s_A Serine protease SPLA; h 99.3 7.9E-12 2.7E-16 111.1 10.7 124 28-162 63-196 (200)
34 2pfe_A Protease A, alkaline se 99.3 1.5E-11 5.1E-16 108.6 11.4 121 31-159 47-178 (186)
35 1agj_A Epidermolytic toxin A; 99.3 3E-11 1E-15 110.7 12.4 126 29-163 104-240 (242)
36 2i6v_A General secretion pathw 99.3 2.4E-12 8.4E-17 99.4 4.2 68 198-275 19-87 (87)
37 1uit_A Human discs large 5 pro 99.2 2.6E-12 9E-17 104.7 1.7 91 164-270 7-105 (117)
38 3gsl_A Disks large homolog 4; 99.2 5.9E-11 2E-15 104.6 9.8 117 197-342 34-155 (196)
39 2eaq_A LIM domain only protein 99.2 8.1E-12 2.8E-16 96.8 3.4 72 172-267 16-90 (90)
40 2qa9_E Streptogrisin-B; chymot 99.1 8.1E-10 2.8E-14 97.0 14.6 125 31-161 51-181 (185)
41 2o8l_A V8 protease, taphylococ 99.1 6.9E-10 2.4E-14 103.8 14.8 120 31-163 82-209 (274)
42 2w4f_A Protein LAP4; structura 99.1 5.6E-11 1.9E-15 93.3 6.2 82 172-268 13-95 (97)
43 3id1_A Regulator of sigma E pr 99.1 4.9E-11 1.7E-15 93.7 5.8 70 200-279 4-76 (95)
44 3cyy_A Tight junction protein 99.1 1.3E-11 4.5E-16 95.9 2.4 78 184-274 10-91 (92)
45 1x5q_A LAP4 protein; PDZ domai 99.1 1E-10 3.6E-15 94.0 6.6 83 172-269 25-108 (110)
46 2eeh_A PDZ domain-containing p 99.1 1.1E-10 3.7E-15 92.3 6.5 75 172-268 21-96 (100)
47 3sfj_A TAX1-binding protein 3; 99.1 1.3E-10 4.5E-15 92.4 6.9 83 172-265 18-104 (104)
48 2zpm_A Regulator of sigma E pr 99.1 3.7E-11 1.3E-15 93.2 3.5 67 200-277 6-73 (91)
49 1qtf_A Exfoliative toxin B; se 99.1 1.6E-10 5.6E-15 106.2 7.9 110 29-157 98-216 (246)
50 2fcf_A Multiple PDZ domain pro 99.1 6.8E-11 2.3E-15 93.9 4.4 82 172-267 15-100 (103)
51 2pkt_A PDZ and LIM domain prot 99.1 6.7E-11 2.3E-15 91.8 4.1 74 173-269 13-89 (91)
52 1qau_A Neuronal nitric oxide s 99.1 1.5E-10 5E-15 93.4 5.9 84 173-279 13-100 (112)
53 2rcz_A Tight junction protein 99.1 3.5E-11 1.2E-15 90.9 2.1 77 176-266 1-81 (81)
54 3r0h_A INAD, inactivation-NO-a 99.0 4.2E-10 1.4E-14 100.3 8.8 111 198-342 45-161 (206)
55 1p1d_A PDZ45, glutamate recept 99.0 1E-10 3.5E-15 103.9 4.7 114 197-342 35-160 (196)
56 3rle_A Golgi reassembly-stacki 99.0 3.8E-10 1.3E-14 101.4 8.2 85 172-276 94-180 (209)
57 2dls_A PDZ-rhogef, RHO guanine 99.0 4.5E-10 1.5E-14 87.6 7.3 59 198-267 29-88 (93)
58 1wh1_A KIAA1095 protein; PDZ d 99.0 4.1E-11 1.4E-15 98.8 1.3 80 172-271 31-112 (124)
59 2iwq_A Multiple PDZ domain pro 99.0 2.8E-10 9.5E-15 93.7 5.6 82 172-267 35-120 (123)
60 4fgm_A Aminopeptidase N family 99.0 9.6E-10 3.3E-14 113.4 10.6 72 197-279 495-567 (597)
61 2vsp_A PDZ domain-containing p 99.0 9.2E-11 3.2E-15 91.0 2.3 61 197-269 26-89 (91)
62 2v90_A PDZ domain-containing p 99.0 1E-10 3.5E-15 91.7 2.6 77 173-270 14-93 (96)
63 3bpu_A Membrane-associated gua 99.0 8.1E-10 2.8E-14 85.0 7.3 71 174-267 15-87 (88)
64 2vwr_A Ligand of NUMB protein 99.0 5.7E-10 2E-14 87.2 6.3 73 174-268 17-91 (95)
65 3tsv_A Tight junction protein 99.0 3.9E-10 1.3E-14 92.9 5.5 61 198-268 51-114 (124)
66 2he4_A Na(+)/H(+) exchange reg 99.0 6.4E-10 2.2E-14 86.0 6.2 70 174-267 16-88 (90)
67 2qt5_A Glutamate receptor-inte 99.0 1.7E-09 5.7E-14 96.1 9.3 115 197-342 32-160 (200)
68 2sga_A Proteinase A; hydrolase 99.0 4E-09 1.4E-13 92.3 11.3 118 37-160 50-176 (181)
69 2hga_A Conserved protein MTH13 99.0 1.9E-09 6.3E-14 89.0 8.4 67 197-277 24-90 (125)
70 1uez_A KIAA1526 protein; PDZ d 99.0 4.8E-10 1.6E-14 88.7 4.7 74 173-268 21-95 (101)
71 2h2b_A Tight junction protein 98.9 1.3E-09 4.4E-14 87.1 7.2 80 174-268 20-99 (107)
72 1uf1_A KIAA1526 protein; PDZ d 98.9 3.5E-10 1.2E-14 93.5 3.9 70 198-278 46-116 (128)
73 1wcz_A Glutamyl endopeptidase; 98.9 7.6E-09 2.6E-13 96.3 13.4 122 30-164 81-210 (268)
74 2jxo_A Ezrin-radixin-moesin-bi 98.9 2.2E-10 7.4E-15 90.1 2.3 72 174-268 21-95 (98)
75 1vb7_A PDZ and LIM domain 2; P 98.9 2.4E-10 8.1E-15 89.3 2.5 74 173-269 16-92 (94)
76 1m5z_A GRIP, AMPA receptor int 98.9 1.9E-09 6.6E-14 83.4 7.6 70 174-265 20-90 (91)
77 1ihj_A INAD; intermolecular di 98.9 6.8E-10 2.3E-14 87.2 5.0 61 197-267 36-98 (98)
78 2yub_A LIMK-2, LIM domain kina 98.9 1.4E-10 4.7E-15 94.8 0.9 62 197-270 43-109 (118)
79 2koj_A Partitioning defective 98.9 2.2E-09 7.4E-14 86.3 7.8 78 173-268 22-103 (111)
80 4amh_A Disks large homolog 1; 98.9 1.3E-09 4.6E-14 87.1 6.5 70 197-276 31-103 (106)
81 1b8q_A Protein (neuronal nitri 98.9 2.7E-10 9.2E-15 94.1 1.9 82 173-277 20-105 (127)
82 1um1_A KIAA1849 protein, RSGI 98.9 2.8E-10 9.5E-15 91.5 1.8 84 174-275 20-105 (110)
83 2awx_A Synapse associated prot 98.9 1.4E-09 4.7E-14 86.7 5.8 70 197-276 32-103 (105)
84 2jil_A GRIP1 protein, glutamat 98.9 3.8E-10 1.3E-14 88.5 2.5 78 173-269 14-95 (97)
85 2opg_A Multiple PDZ domain pro 98.9 2.4E-09 8.3E-14 84.0 7.1 78 173-270 15-94 (98)
86 2edz_A PDZ domain-containing p 98.9 6.6E-11 2.2E-15 95.9 -2.2 67 197-275 37-106 (114)
87 2kom_A Partitioning defective 98.9 2.7E-09 9.3E-14 87.4 7.3 76 174-267 42-121 (121)
88 2pa1_A PDZ and LIM domain prot 98.9 8.5E-10 2.9E-14 84.7 3.8 73 172-267 11-86 (87)
89 2uzc_A Human pdlim5, PDZ and L 98.9 1.3E-09 4.6E-14 83.7 4.9 72 173-267 13-87 (88)
90 1wf7_A Enigma homologue protei 98.9 2E-10 6.9E-15 91.2 0.1 69 198-276 29-98 (103)
91 1v5l_A PDZ and LIM domain 3; a 98.9 5.7E-10 2E-14 88.7 2.3 75 172-269 14-91 (103)
92 2qg1_A Multiple PDZ domain pro 98.9 2.8E-09 9.5E-14 82.6 5.9 73 173-267 16-90 (92)
93 2f5y_A Regulator of G-protein 98.9 4.6E-09 1.6E-13 81.4 7.1 62 198-269 24-86 (91)
94 1rgw_A ZAsp protein; PDZ, cyph 98.9 1.6E-09 5.5E-14 82.7 4.4 60 198-267 25-85 (85)
95 3ngh_A PDZ domain-containing p 98.8 1.1E-09 3.7E-14 87.4 3.3 60 197-268 25-87 (106)
96 3axa_A Afadin, nectin-3, prote 98.8 5.2E-09 1.8E-13 83.4 7.3 78 173-268 21-100 (106)
97 1x5n_A Harmonin; PDZ domain, u 98.8 6.9E-10 2.4E-14 89.7 1.9 78 173-272 27-106 (114)
98 2qkv_A Inactivation-NO-after-p 98.8 5.2E-09 1.8E-13 82.0 6.7 59 198-266 31-91 (96)
99 2q3g_A PDZ and LIM domain prot 98.8 2.8E-09 9.5E-14 82.2 4.8 75 173-268 13-88 (89)
100 1nf3_C PAR-6B; semi-CRIB motif 98.8 3.9E-10 1.3E-14 93.4 -0.1 80 174-267 43-126 (128)
101 2fe5_A Presynaptic protein SAP 98.8 4.2E-09 1.4E-13 81.9 5.8 61 197-267 32-94 (94)
102 1n7e_A AMPA receptor interacti 98.8 6.9E-09 2.4E-13 81.3 7.0 74 174-268 17-92 (97)
103 2qbw_A PDZ-fibronectin fusion 98.8 1.1E-08 3.6E-13 90.4 9.0 72 197-278 23-97 (195)
104 2o2t_A Multiple PDZ domain pro 98.8 4.4E-10 1.5E-14 91.4 0.0 76 174-269 33-113 (117)
105 2iwn_A Multiple PDZ domain pro 98.8 5.9E-09 2E-13 81.4 6.5 79 172-267 14-94 (97)
106 1mbm_A NSP4 proteinase, chymot 98.8 2.2E-09 7.6E-14 92.8 4.4 85 26-137 46-130 (198)
107 2ejy_A 55 kDa erythrocyte memb 98.8 3.5E-09 1.2E-13 83.4 5.1 68 174-266 25-96 (97)
108 3i4w_A Disks large homolog 4; 98.8 4.9E-09 1.7E-13 83.1 6.0 72 174-267 23-96 (104)
109 2d90_A PDZ domain containing p 98.8 3.7E-09 1.3E-13 83.7 5.2 71 174-268 18-91 (102)
110 3khf_A Microtubule-associated 98.8 1.8E-09 6.2E-14 84.9 3.4 61 198-268 34-95 (99)
111 2eeg_A PDZ and LIM domain prot 98.8 2E-09 6.9E-14 83.9 3.4 61 197-267 31-92 (94)
112 1ujd_A KIAA0559 protein; PDZ d 98.8 2.3E-09 7.9E-14 87.2 3.9 80 173-268 30-111 (117)
113 1d5g_A Human phosphatase HPTP1 98.8 5.7E-09 1.9E-13 81.5 5.9 61 197-267 32-94 (96)
114 2i04_A Membrane-associated gua 98.8 3.6E-09 1.2E-13 80.7 4.7 60 197-264 24-85 (85)
115 2la8_A Inactivation-NO-after-p 98.8 5.1E-09 1.8E-13 83.7 5.7 59 198-266 25-85 (106)
116 2yt7_A Amyloid beta A4 precurs 98.8 5.1E-09 1.8E-13 82.8 5.6 74 173-265 21-98 (101)
117 2i1n_A Discs, large homolog 3; 98.8 2.2E-09 7.5E-14 84.9 3.3 81 173-269 15-97 (102)
118 2g5m_B Neurabin-2; spinophilin 98.8 6.5E-10 2.2E-14 89.8 0.1 68 197-274 34-103 (113)
119 3r68_A Na(+)/H(+) exchange reg 98.8 6.5E-09 2.2E-13 81.0 5.8 72 173-268 16-90 (95)
120 1mfg_A ERB-B2 interacting prot 98.8 8E-09 2.7E-13 80.5 6.3 60 197-266 34-93 (95)
121 1wi2_A Riken cDNA 2700099C19; 98.8 4.3E-09 1.5E-13 83.7 4.8 71 173-267 27-100 (104)
122 1tp5_A Presynaptic density pro 98.8 6.6E-09 2.3E-13 84.6 5.9 72 174-267 26-99 (119)
123 1g9o_A NHE-RF; PDZ domain, com 98.8 8.4E-09 2.9E-13 79.7 6.1 73 174-267 15-88 (91)
124 2jre_A C60-1 PDZ domain peptid 98.8 2E-09 6.8E-14 86.1 2.6 81 172-268 24-106 (108)
125 1wif_A RSGI RUH-020, riken cDN 98.8 2.9E-09 9.9E-14 87.9 3.4 58 198-265 49-110 (126)
126 2ego_A General receptor for ph 98.8 7.2E-09 2.5E-13 81.1 5.4 57 197-265 36-95 (96)
127 2e7k_A Maguk P55 subfamily mem 98.8 4.6E-09 1.6E-13 81.5 4.2 69 172-266 17-88 (91)
128 2jik_A Synaptojanin-2 binding 98.8 8.5E-09 2.9E-13 81.3 5.8 79 173-267 18-98 (101)
129 1uep_A Membrane associated gua 98.8 2.4E-09 8.1E-14 85.0 2.6 76 173-267 20-97 (103)
130 1kwa_A Hcask/LIN-2 protein; PD 98.8 4.9E-09 1.7E-13 80.8 4.3 70 173-267 13-86 (88)
131 2dmz_A INAD-like protein; PDZ 98.7 3.6E-09 1.2E-13 87.4 3.2 79 173-269 27-109 (129)
132 2r4h_A Membrane-associated gua 98.7 9.5E-09 3.3E-13 82.9 5.6 74 174-268 36-111 (112)
133 1ueq_A Membrane associated gua 98.7 7.4E-09 2.5E-13 84.9 5.0 61 197-267 43-107 (123)
134 1v5q_A GRIP1 homolog, glutamat 98.7 3.5E-09 1.2E-13 86.8 2.9 61 198-268 45-109 (122)
135 2kjd_A Sodium/hydrogen exchang 98.7 3.9E-09 1.3E-13 87.0 3.2 79 174-275 21-104 (128)
136 2q9v_A Membrane-associated gua 98.7 4.3E-09 1.5E-13 81.2 3.1 74 174-266 14-89 (90)
137 1ujv_A Membrane associated gua 98.7 2E-08 6.8E-13 78.7 7.0 59 198-268 32-93 (96)
138 2iwo_A Multiple PDZ domain pro 98.7 2.5E-09 8.5E-14 87.5 1.7 64 197-270 52-117 (120)
139 1q7x_A PDZ2B domain of PTP-BAS 98.7 1.3E-08 4.3E-13 81.4 5.8 62 197-268 41-104 (108)
140 2vsv_A Rhophilin-2; scaffold p 98.7 8.9E-09 3E-13 82.8 4.5 60 198-268 44-106 (109)
141 2djt_A Unnamed protein product 98.7 1.1E-08 3.7E-13 81.2 4.8 77 173-268 22-100 (104)
142 2fne_A Multiple PDZ domain pro 98.7 9.1E-09 3.1E-13 83.8 4.3 77 174-268 37-115 (117)
143 1va8_A Maguk P55 subfamily mem 98.7 8.8E-09 3E-13 83.2 4.2 59 198-268 48-110 (113)
144 1wfg_A Regulating synaptic mem 98.7 1.1E-08 3.8E-13 84.9 4.9 61 197-267 64-128 (131)
145 2dlu_A INAD-like protein; PDZ 98.7 2E-08 6.8E-13 80.7 6.0 72 174-268 27-100 (111)
146 2byg_A Channel associated prot 98.7 1.9E-08 6.6E-13 81.8 5.8 78 174-267 36-115 (117)
147 2daz_A INAD-like protein; PDZ 98.7 1.9E-08 6.4E-13 82.6 5.4 76 173-268 36-113 (124)
148 1wf8_A Neurabin-I; PDZ domain, 98.7 1.2E-08 4.2E-13 81.4 4.0 61 197-267 39-101 (107)
149 2kv8_A RGS12, regulator of G-p 98.7 8.8E-09 3E-13 78.2 3.0 57 198-266 23-82 (83)
150 1n7t_A 99-MER peptide of densi 98.7 1.6E-08 5.6E-13 80.0 4.4 60 197-266 42-101 (103)
151 3cbz_A Dishevelled-2; PDZ doma 98.6 1.4E-08 4.8E-13 81.4 3.9 76 174-268 18-98 (108)
152 3qik_A Phosphatidylinositol 3, 98.6 1.2E-08 4.2E-13 80.3 3.3 57 197-263 38-98 (101)
153 1wha_A KIAA0147 protein, scrib 98.6 1.3E-08 4.6E-13 80.9 3.4 61 197-267 37-99 (105)
154 3kzd_A TIAM-1, T-lymphoma inva 98.6 3.1E-08 1.1E-12 77.3 5.4 50 173-232 20-70 (94)
155 2eno_A Synaptojanin-2-binding 98.6 1.9E-08 6.6E-13 82.0 4.4 80 173-268 28-109 (120)
156 2kpk_A Membrane-associated gua 98.6 3.5E-08 1.2E-12 81.6 6.0 62 198-267 43-106 (129)
157 2db5_A INAD-like protein; PDZ 98.6 1.8E-08 6.1E-13 83.1 3.8 74 174-267 38-116 (128)
158 3o46_A Maguk P55 subfamily mem 98.6 3.1E-08 1.1E-12 76.9 5.0 71 174-268 16-90 (93)
159 1q3o_A Shank1; PDZ, GKAP, pept 98.6 3.4E-08 1.2E-12 79.0 5.4 57 198-266 45-104 (109)
160 1y7n_A Amyloid beta A4 precurs 98.6 9.4E-09 3.2E-13 79.7 1.9 54 199-265 33-89 (90)
161 2edv_A FERM and PDZ domain-con 98.6 1.3E-08 4.6E-13 79.7 2.7 60 197-266 30-89 (96)
162 3suz_A Amyloid beta A4 precurs 98.6 1.2E-08 4E-13 100.1 2.7 107 198-343 232-340 (388)
163 2eei_A PDZ domain-containing p 98.6 1.3E-08 4.4E-13 81.0 2.5 73 174-268 20-93 (106)
164 3b76_A E3 ubiquitin-protein li 98.6 6.1E-08 2.1E-12 79.0 6.4 76 173-266 36-113 (118)
165 4a8c_A Periplasmic PH-dependen 98.6 7.5E-08 2.6E-12 95.8 8.1 69 198-278 363-432 (436)
166 1fc6_A Photosystem II D1 prote 98.6 1.7E-07 5.8E-12 91.8 10.4 82 173-276 85-172 (388)
167 2xkx_A Disks large homolog 4; 98.6 6E-08 2.1E-12 102.4 7.5 116 197-342 88-209 (721)
168 3fan_A Non-structural protein; 98.6 2.3E-08 7.8E-13 87.8 3.6 80 33-139 64-146 (213)
169 1wfv_A Membrane associated gua 98.6 1.1E-08 3.7E-13 80.9 1.4 74 174-268 23-98 (103)
170 3qe1_A Sorting nexin-27, G pro 98.6 2.1E-08 7.3E-13 79.9 3.0 59 198-268 43-104 (107)
171 1wg6_A Hypothetical protein (r 98.6 2E-08 7E-13 82.8 3.0 80 172-268 36-124 (127)
172 1v62_A KIAA1719 protein; struc 98.6 1.3E-08 4.6E-13 82.7 1.7 73 174-268 28-104 (117)
173 1x6d_A Interleukin-16; PDZ dom 98.6 6.8E-09 2.3E-13 84.5 -0.1 64 197-269 41-106 (119)
174 2dm8_A INAD-like protein; PDZ 98.6 1.8E-08 6.2E-13 81.5 2.3 61 198-268 43-105 (116)
175 2dkr_A LIN-7 homolog B; LIN-7B 98.6 3.8E-08 1.3E-12 76.2 3.9 61 197-267 29-91 (93)
176 2ehr_A INAD-like protein; PDZ 98.5 5.2E-08 1.8E-12 79.0 4.8 61 197-267 49-111 (117)
177 3pv2_A DEGQ; trypsin fold, PDZ 98.5 4.6E-08 1.6E-12 97.7 5.3 64 198-273 386-450 (451)
178 1qav_A Alpha-1 syntrophin (res 98.5 7.4E-08 2.5E-12 74.2 5.4 72 173-265 16-89 (90)
179 2csj_A TJP2 protein; PDZ domai 98.5 3.8E-08 1.3E-12 79.8 3.8 62 197-268 45-106 (117)
180 2yuy_A RHO GTPase activating p 98.5 6.1E-09 2.1E-13 85.8 -1.1 59 197-267 60-121 (126)
181 1whd_A RGS3, regulator of G-pr 98.5 2.8E-08 9.6E-13 78.3 2.8 60 198-267 36-96 (100)
182 3nfk_A Tyrosine-protein phosph 98.5 6.9E-08 2.4E-12 76.8 5.0 60 198-265 43-107 (107)
183 1vae_A Rhophilin 2, rhophilin, 98.5 2E-08 6.7E-13 81.0 1.6 56 198-264 36-94 (111)
184 1uhp_A Hypothetical protein KI 98.5 8.1E-08 2.8E-12 76.6 5.0 61 197-267 40-102 (107)
185 3gsl_A Disks large homolog 4; 98.5 4.2E-08 1.5E-12 86.1 3.6 62 197-270 129-194 (196)
186 2edp_A Fragment, shroom family 98.5 5E-08 1.7E-12 76.9 3.6 60 198-268 35-96 (100)
187 1wi4_A Synip, syntaxin binding 98.5 3.4E-08 1.1E-12 79.3 2.5 75 174-267 26-106 (109)
188 3tsz_A Tight junction protein 98.5 6E-08 2E-12 95.1 4.6 71 174-267 20-93 (391)
189 3l4f_D SH3 and multiple ankyri 98.5 9.3E-08 3.2E-12 79.4 5.0 61 198-268 65-126 (132)
190 1uew_A Membrane associated gua 98.5 5.7E-08 1.9E-12 78.4 3.6 58 199-268 44-105 (114)
191 3k1r_A Harmonin; protein-prote 98.5 6.9E-08 2.4E-12 85.3 4.4 58 197-267 109-169 (192)
192 2gzv_A PRKCA-binding protein; 98.5 1.4E-07 4.9E-12 76.2 5.9 71 172-265 35-109 (114)
193 2qt5_A Glutamate receptor-inte 98.5 6E-08 2.1E-12 86.0 3.6 62 197-270 134-199 (200)
194 1um7_A Synapse-associated prot 98.5 3.8E-08 1.3E-12 79.1 2.1 61 197-267 38-100 (113)
195 3e17_A Tight junction protein 98.5 3E-08 1E-12 76.3 1.4 57 198-266 21-81 (88)
196 2d92_A INAD-like protein; PDZ 98.5 5.8E-08 2E-12 77.6 2.9 74 174-265 27-104 (108)
197 1uju_A Scribble; PDZ domain, c 98.4 3.3E-08 1.1E-12 79.4 1.0 61 197-267 43-105 (111)
198 3soe_A Membrane-associated gua 98.4 5.1E-07 1.7E-11 72.8 7.8 61 198-270 34-97 (113)
199 2d8i_A T-cell lymphoma invasio 98.4 1E-07 3.5E-12 77.2 3.5 68 175-266 31-101 (114)
200 3hpk_A Protein interacting wit 98.4 3.1E-07 1E-11 75.3 6.4 59 197-265 44-104 (125)
201 2krg_A Na(+)/H(+) exchange reg 98.4 9.5E-09 3.3E-13 92.7 -3.0 67 198-276 33-105 (216)
202 2z17_A Pleckstrin homology SEC 98.4 5.6E-08 1.9E-12 77.1 1.4 73 174-262 28-103 (104)
203 3shw_A Tight junction protein 98.4 1.6E-07 5.6E-12 93.7 4.5 60 198-267 23-85 (468)
204 4e34_A Golgi-associated PDZ an 98.4 2.6E-07 8.9E-12 70.5 4.7 57 198-264 28-86 (87)
205 3r0h_A INAD, inactivation-NO-a 98.4 4.2E-07 1.4E-11 80.6 6.6 59 198-266 136-196 (206)
206 1v6b_A Harmonin isoform A1; st 98.4 7.6E-08 2.6E-12 78.3 1.1 57 199-265 44-106 (118)
207 2xkx_A Disks large homolog 4; 98.4 1.2E-06 4.1E-11 92.4 10.3 65 197-271 183-249 (721)
208 3egg_C Spinophilin; PP1, serin 98.3 3.6E-07 1.2E-11 79.2 5.3 78 173-265 91-170 (170)
209 3k50_A Putative S41 protease; 98.3 4.5E-07 1.5E-11 89.1 6.1 57 199-268 91-148 (403)
210 1p1d_A PDZ45, glutamate recept 98.3 1.6E-07 5.6E-12 83.0 2.6 73 173-266 119-195 (196)
211 2cs5_A Tyrosine-protein phosph 98.3 1.5E-07 5E-12 76.5 1.7 77 173-268 27-108 (119)
212 1i16_A Interleukin 16, LCF; cy 98.3 3E-07 1E-11 76.0 3.2 62 197-267 56-119 (130)
213 2dc2_A GOPC, golgi associated 98.3 6.3E-07 2.2E-11 70.9 4.8 75 173-268 21-97 (103)
214 1r6j_A Syntenin 1; PDZ, membra 98.2 1.1E-06 3.6E-11 66.8 4.8 53 202-264 27-80 (82)
215 1ufx_A KIAA1526 protein; PDZ d 98.2 3.1E-07 1.1E-11 72.8 1.7 59 199-267 33-98 (103)
216 1ky9_A Protease DO, DEGP, HTRA 98.2 1.8E-07 6.2E-12 93.3 0.0 65 197-273 382-447 (448)
217 2lob_A Golgi-associated PDZ an 97.5 1.9E-07 6.4E-12 75.3 0.0 38 198-235 53-94 (112)
218 3gge_A PDZ domain-containing p 98.1 6.9E-06 2.4E-10 63.9 7.2 60 198-265 28-89 (95)
219 1k32_A Tricorn protease; prote 98.1 8.8E-06 3E-10 88.9 9.9 66 198-275 748-825 (1045)
220 1z87_A Alpha-1-syntrophin; pro 97.9 2.1E-06 7.2E-11 79.4 1.8 75 173-268 89-165 (263)
221 1w9e_A Syntenin 1; cell adhesi 97.9 1.1E-06 3.8E-11 75.5 -0.8 54 201-275 110-164 (166)
222 4fln_A Protease DO-like 2, chl 97.9 2.5E-05 8.6E-10 79.2 8.2 83 173-268 374-474 (539)
223 1zyo_A Serine protease; beta-b 97.8 3.6E-05 1.2E-09 67.6 7.7 112 32-159 72-185 (191)
224 1p3c_A Glutamyl-endopeptidase; 97.5 0.00026 8.9E-09 62.7 8.3 89 40-139 95-190 (215)
225 3mmg_A Nuclear inclusion prote 97.4 0.0018 6.2E-08 58.3 11.7 114 38-163 77-194 (241)
226 1pq7_A Trypsin; ultra-high res 97.3 0.0019 6.4E-08 57.6 11.6 110 30-139 67-199 (224)
227 3suz_A Amyloid beta A4 precurs 97.1 7.8E-05 2.7E-09 72.8 0.0 63 189-265 308-373 (388)
228 3s9c_A Vipera russelli protein 97.1 0.0052 1.8E-07 54.8 12.1 124 41-165 87-225 (234)
229 3s69_A Thrombin-like enzyme de 97.1 0.0052 1.8E-07 54.7 11.8 124 41-165 85-225 (234)
230 4i8h_A Cationic trypsin, beta- 97.0 0.0065 2.2E-07 53.7 11.7 133 31-164 66-220 (223)
231 3cp7_A Alkaline serine proteas 97.0 0.0029 9.9E-08 56.4 9.2 115 40-163 89-214 (218)
232 1hj8_A Trypsin I; hydrolase, r 96.9 0.0094 3.2E-07 52.9 11.9 132 31-163 66-218 (222)
233 3mfj_A Cationic trypsin; serin 96.9 0.0097 3.3E-07 52.8 11.7 122 41-163 83-219 (223)
234 1ton_A Tonin; hydrolase(serine 96.8 0.02 6.8E-07 51.1 13.5 122 41-163 93-230 (235)
235 1gvz_A Kallikrein-1E2; antigen 96.8 0.014 4.8E-07 52.1 12.3 98 40-138 94-206 (237)
236 1lo6_A Kallikrein 6, HK6; seri 96.8 0.015 5.2E-07 51.6 12.4 123 40-163 83-219 (223)
237 1npm_A Neuropsin; serine prote 96.8 0.0086 2.9E-07 53.2 10.7 97 41-138 87-197 (225)
238 1fuj_A PR3, myeloblastin; hydr 96.8 0.01 3.6E-07 52.4 11.2 93 40-137 89-192 (221)
239 1fxy_A Coagulation factor XA-t 96.8 0.0099 3.4E-07 52.9 11.1 132 31-163 70-223 (228)
240 2pka_B Kallikrein A; serine pr 96.8 0.0096 3.3E-07 49.7 10.2 99 39-138 6-121 (152)
241 1ao5_A Glandular kallikrein-13 96.7 0.016 5.6E-07 51.7 12.3 123 40-163 94-232 (237)
242 2z7f_E Leukocyte elastase; ser 96.7 0.019 6.6E-07 50.6 12.5 93 40-137 86-189 (218)
243 2zch_P Prostate-specific antig 96.7 0.02 6.9E-07 51.1 12.7 123 40-163 94-232 (237)
244 1lvm_A Catalytic domain of the 96.7 0.019 6.5E-07 51.3 12.1 112 40-164 87-202 (229)
245 4e7n_A Snake-venom thrombin-li 96.7 0.02 6.9E-07 50.9 12.5 125 40-165 86-229 (238)
246 3qzr_A 3C protein; chymotrypsi 96.7 0.026 8.8E-07 49.0 12.3 106 40-153 73-178 (187)
247 3rp2_A RAT MAST cell protease 96.6 0.011 3.6E-07 52.3 10.3 109 30-139 70-200 (224)
248 1a7s_A Heparin binding protein 96.6 0.015 5E-07 51.6 10.9 119 40-165 87-218 (225)
249 4ag1_A Chymase; hydrolase-de n 96.6 0.036 1.2E-06 48.9 13.4 108 31-139 71-200 (226)
250 2aiq_A Protein C activator; sn 96.6 0.023 7.9E-07 50.6 12.2 124 40-165 83-222 (231)
251 1spj_A Kallikrein 1; serine pr 96.6 0.025 8.4E-07 50.5 12.3 97 41-138 95-207 (238)
252 3ncl_A Suppressor of tumorigen 96.5 0.021 7.1E-07 50.9 11.6 133 30-162 78-237 (241)
253 3h7t_A Group 3 allergen smipp- 96.5 0.009 3.1E-07 53.0 8.9 123 40-164 83-228 (235)
254 2qxi_A Kallikrein-7; S1 pocket 96.5 0.016 5.4E-07 51.5 10.4 97 41-138 82-193 (224)
255 2bdg_A Kallikrein-4; serine pr 96.5 0.026 8.9E-07 50.0 11.8 108 30-138 67-194 (223)
256 2psx_A Kallikrein-5; zinc inhi 96.5 0.022 7.5E-07 50.6 11.2 97 41-138 86-196 (227)
257 1sgf_A 7S NGF, nerve growth fa 96.5 0.027 9.3E-07 50.4 11.8 124 40-164 97-236 (240)
258 3fzz_A Granzyme C; hydrolase, 96.4 0.049 1.7E-06 48.0 13.3 130 31-163 71-224 (227)
259 3beu_A Trypsin, SGT; beta shee 96.4 0.028 9.6E-07 49.6 11.3 107 30-139 65-196 (224)
260 2b0f_A Picornain 3C (protease 96.3 0.048 1.6E-06 47.2 12.0 105 40-153 69-173 (182)
261 3mhw_U Urokinase-type plasmino 96.3 0.081 2.8E-06 47.1 14.2 122 41-162 96-243 (247)
262 3h7o_A Group 3 allergen smipp- 96.3 0.017 5.7E-07 51.1 9.5 123 40-164 87-225 (228)
263 3q3y_A HEVB EV93 3C protease; 96.2 0.063 2.1E-06 46.6 12.1 104 41-153 72-176 (191)
264 1cgh_A Cathepsin G; inflammati 96.2 0.037 1.3E-06 49.0 11.2 109 30-139 69-199 (224)
265 1iau_A Granzyme B; hydrolase-h 96.1 0.051 1.7E-06 48.1 11.5 107 31-138 70-200 (227)
266 1mza_A Pro-granzyme K; apoptos 96.1 0.091 3.1E-06 46.8 13.1 98 41-139 91-208 (240)
267 1elt_A Elastase; serine protei 96.0 0.091 3.1E-06 46.7 12.8 99 40-138 91-208 (236)
268 2asu_B Hepatocyte growth facto 96.0 0.058 2E-06 48.0 11.5 131 33-163 75-224 (234)
269 3zve_A 3C protease; hydrolase, 96.0 0.039 1.3E-06 48.1 9.8 105 40-153 69-174 (190)
270 1eq9_A Chymotrypsin; FIRE ANT, 96.0 0.079 2.7E-06 46.7 12.2 108 30-139 68-196 (222)
271 2xw9_A Complement factor D; im 96.0 0.061 2.1E-06 47.5 11.4 97 41-138 88-200 (228)
272 1bru_P Elastase, PPE; serine p 95.9 0.22 7.4E-06 44.4 14.9 99 41-139 92-211 (241)
273 1euf_A Duodenase; serine prote 95.9 0.057 2E-06 47.8 10.7 97 41-138 87-199 (227)
274 1aut_C Activated protein C; se 95.9 0.058 2E-06 48.5 10.9 124 41-164 87-238 (250)
275 3gov_B MAsp-1; complement, ser 95.8 0.089 3E-06 46.9 12.1 134 30-163 85-246 (251)
276 1orf_A Granzyme A; hydrolase-h 95.8 0.1 3.6E-06 46.3 12.2 99 40-139 84-202 (234)
277 4dcd_A Protease 3C, genome pol 95.8 0.064 2.2E-06 46.6 10.2 95 41-138 77-171 (190)
278 1si5_H Scatter factor, hepatoc 95.7 0.14 4.8E-06 45.6 12.6 129 37-165 78-227 (240)
279 4dgj_A Enteropeptidase catalyt 95.6 0.079 2.7E-06 46.9 10.7 108 32-139 75-209 (235)
280 2f91_A Hepatopancreas trypsin; 95.5 0.19 6.6E-06 44.6 12.9 99 41-139 95-211 (237)
281 2hlc_A Collagenase; serine pro 95.5 0.056 1.9E-06 47.9 9.2 98 41-138 87-199 (230)
282 1uf1_A KIAA1526 protein; PDZ d 95.5 0.0071 2.4E-07 49.0 2.9 66 252-342 5-70 (128)
283 1m9u_A Earthworm fibrinolytic 95.5 0.13 4.3E-06 45.9 11.5 108 30-137 72-210 (241)
284 1t8o_A Chymotrypsin A; chymotr 95.4 0.22 7.6E-06 44.5 13.0 122 41-163 101-241 (245)
285 2oq5_A Transmembrane protease, 95.3 0.36 1.2E-05 42.6 14.0 99 41-139 85-205 (232)
286 1cqq_A Type 2 rhinovirus 3C pr 95.3 0.23 7.9E-06 42.8 12.1 104 41-153 70-174 (180)
287 2any_A Kininogenin, plasma kal 95.3 0.14 4.9E-06 45.5 11.1 132 32-163 76-234 (241)
288 2vnt_A Urokinase-type plasmino 95.2 0.4 1.4E-05 43.4 14.2 49 116-164 217-268 (276)
289 2jde_A Urokinase-type plasmino 95.2 0.23 7.9E-06 45.1 12.5 123 41-163 119-267 (276)
290 1azz_A Collagenase; complex (s 95.2 0.075 2.6E-06 47.1 8.9 122 40-163 85-221 (226)
291 3gyl_B Prostasin; ENAC, zymoge 95.0 0.16 5.3E-06 45.7 10.6 49 31-79 72-131 (261)
292 2bhg_A Foot-and-mouth disease 94.9 0.09 3.1E-06 46.5 8.6 101 36-138 76-185 (209)
293 2zgc_A Granzyme M; serine prot 94.9 0.24 8.3E-06 44.2 11.6 125 40-164 84-228 (240)
294 1ym0_A Fibrinotic enzyme compo 94.9 0.19 6.4E-06 44.6 10.7 100 40-139 89-211 (238)
295 3rm2_H Thrombin heavy chain; s 94.9 0.15 5.2E-06 45.6 10.2 39 41-79 98-143 (259)
296 2r0l_A Hepatocyte growth facto 94.9 0.19 6.4E-06 44.9 10.8 125 40-164 88-238 (248)
297 1rtf_B (TC)-T-PA, two chain ti 94.8 0.58 2E-05 41.7 13.9 39 41-79 95-141 (252)
298 3tvj_B Mannan-binding lectin s 94.6 0.34 1.2E-05 42.8 11.8 40 40-79 86-131 (242)
299 3h5c_B Vitamin K-dependent pro 94.6 0.16 5.4E-06 47.4 9.9 106 31-137 160-290 (317)
300 3bg8_A Coagulation factor XIA 94.6 0.39 1.3E-05 42.6 12.1 109 31-139 75-210 (238)
301 1ddj_A Plasminogen; catalytic 94.4 0.43 1.5E-05 42.6 12.1 105 35-139 94-219 (247)
302 1pyt_D TC, PCPA-TC, chymotryps 94.4 0.64 2.2E-05 41.5 13.2 98 41-138 104-221 (251)
303 2jkh_A Activated factor XA hea 94.3 0.21 7.1E-06 44.5 9.7 135 30-164 69-232 (241)
304 3f1s_B Vitamin K-dependent pro 94.3 0.16 5.5E-06 46.7 9.1 133 30-164 118-275 (283)
305 1gvk_B Elastase 1, peptide inh 94.3 0.52 1.8E-05 41.8 12.3 99 40-138 91-209 (240)
306 2hal_A Hepatitis A protease 3C 94.3 0.23 7.9E-06 44.0 9.6 42 107-153 159-204 (212)
307 1fon_A Procarboxypeptidase A-S 94.1 0.31 1.1E-05 43.2 10.2 98 41-138 92-209 (240)
308 1yc0_A Hepatocyte growth facto 94.0 0.33 1.1E-05 44.4 10.4 124 40-163 123-272 (283)
309 2qy0_B Complement C1R subcompo 93.8 0.6 2E-05 41.3 11.7 121 41-163 93-237 (242)
310 2f9n_A Alpha I tryptase; serin 93.8 0.56 1.9E-05 41.7 11.4 48 32-79 74-132 (245)
311 1arb_A Achromobacter protease 93.8 0.4 1.4E-05 44.0 10.5 24 115-138 189-212 (268)
312 1fiw_A Beta-acrosin heavy chai 93.6 1.2 4.3E-05 40.7 13.8 123 41-163 100-247 (290)
313 1z8g_A Serine protease hepsin; 93.6 0.71 2.4E-05 44.1 12.4 39 41-79 211-253 (372)
314 2olg_A Pro-phenoloxidase activ 93.3 0.65 2.2E-05 42.1 11.3 40 40-79 131-174 (278)
315 2bdy_A Thrombin; thrombin, com 92.9 0.35 1.2E-05 44.4 8.8 39 41-79 128-173 (289)
316 2wph_S Coagulation factor IXA 92.5 0.46 1.6E-05 41.9 8.8 123 41-163 88-231 (235)
317 2bz6_H Blood coagulation facto 92.3 0.5 1.7E-05 42.2 8.8 125 41-165 89-240 (254)
318 4dur_A Plasminogen, serine pro 92.2 0.96 3.3E-05 47.9 12.0 129 35-163 638-787 (791)
319 2fp7_B Serine protease NS3; fl 91.8 0.25 8.6E-06 41.5 5.4 28 106-135 108-135 (172)
320 2fom_B Polyprotein; flavivirus 91.7 0.28 9.4E-06 41.8 5.7 28 106-135 123-150 (185)
321 2ggv_B NS3, non-structural pro 91.6 0.26 8.9E-06 41.8 5.4 29 106-136 122-150 (185)
322 3u1j_B Serine protease NS3; se 91.6 0.41 1.4E-05 40.8 6.7 57 69-135 101-159 (191)
323 2ijd_1 Picornain 3C, RNA-direc 91.5 1.3 4.5E-05 45.6 11.9 94 41-138 70-164 (644)
324 3e90_B NS3 protease; trypsin-l 91.4 0.41 1.4E-05 41.0 6.5 56 70-135 97-154 (198)
325 3lkw_A Fusion protein of nonst 90.7 0.51 1.7E-05 41.5 6.5 57 69-135 142-200 (236)
326 4f4o_C Haptoglobin; globin fol 90.6 2.4 8.2E-05 40.1 11.9 50 30-79 172-227 (347)
327 1zjk_A Mannan-binding lectin s 90.4 1.7 5.7E-05 41.8 10.9 40 40-79 247-292 (403)
328 2pzd_A Serine protease HTRA2; 88.4 0.29 1E-05 38.2 3.1 47 296-342 7-59 (113)
329 1md8_A C1R complement serine p 88.4 3 0.0001 39.0 10.7 39 41-79 182-224 (329)
330 2b9l_A Prophenoloxidase activa 88.0 3.2 0.00011 39.9 10.9 39 41-79 230-271 (394)
331 3nxp_A Prethrombin-1; alloster 88.0 0.48 1.6E-05 46.2 5.0 38 41-78 263-307 (424)
332 1vcp_A Semliki forest virus ca 87.6 0.49 1.7E-05 37.6 3.8 26 114-139 95-120 (149)
333 4agk_A Capsid protein, coat pr 87.4 0.5 1.7E-05 38.0 3.8 27 113-139 102-128 (158)
334 2xrc_A Human complement factor 87.3 5.2 0.00018 40.4 12.4 39 41-79 410-456 (565)
335 2p3w_A Probable serine proteas 87.3 0.34 1.2E-05 37.8 2.8 47 296-342 7-59 (112)
336 1svp_A Sindbis virus capsid pr 87.2 0.53 1.8E-05 38.0 3.8 25 115-139 105-129 (161)
337 1gpz_A Complement C1R componen 87.0 1.8 6.3E-05 41.4 8.5 39 41-79 250-292 (399)
338 2yew_A Capsid protein, coat pr 87.0 0.5 1.7E-05 41.4 3.9 26 114-139 199-224 (253)
339 1ep5_B Capsid protein C, coat 86.9 0.49 1.7E-05 38.0 3.5 26 114-139 102-127 (157)
340 2f83_A Coagulation factor XI; 85.9 2.5 8.5E-05 43.4 9.2 48 31-78 462-520 (625)
341 1elv_A Complement C1S componen 85.8 4.7 0.00016 37.5 10.5 40 40-79 172-217 (333)
342 2xxl_A GRAM-positive specific 85.3 6.4 0.00022 38.0 11.4 39 41-79 222-267 (408)
343 1kxf_A Sindbis virus capsid pr 85.1 0.62 2.1E-05 41.2 3.5 25 115-139 210-234 (264)
344 3su6_A NS3 protease, NS4A prot 82.8 0.75 2.6E-05 39.1 3.0 41 116-156 156-196 (203)
345 2l97_A HTRA, putative serine p 79.3 0.75 2.6E-05 37.3 1.8 47 296-343 30-81 (134)
346 1yph_E Chymotrypsin A, chain C 77.7 1.8 6.1E-05 32.7 3.5 24 116-139 43-69 (97)
347 3stj_A Protease DEGQ; serine p 73.3 2.8 9.5E-05 39.6 4.2 46 296-342 241-287 (345)
348 2hrv_A 2A cysteine proteinase; 71.7 13 0.00044 30.3 7.1 97 34-138 27-123 (142)
349 1wfg_A Regulating synaptic mem 68.2 6.8 0.00023 31.3 4.9 79 254-343 12-91 (131)
350 2rcz_A Tight junction protein 66.1 1 3.5E-05 32.3 -0.4 26 318-343 21-47 (81)
351 1lcy_A HTRA2 serine protease; 64.9 5.2 0.00018 37.3 4.1 48 295-342 227-280 (325)
352 1z8r_A Coxsackievirus B4 polyp 64.4 12 0.0004 31.3 5.6 97 34-138 47-143 (166)
353 3dor_A Protein CT_858, CPAF; m 61.3 38 0.0013 34.2 9.8 79 199-280 97-189 (583)
354 2fcf_A Multiple PDZ domain pro 58.2 4.4 0.00015 30.5 1.9 47 296-343 17-65 (103)
355 1yph_C Chymotrypsin A, chain B 56.3 33 0.0011 26.8 7.0 38 41-78 86-127 (131)
356 3sfj_A TAX1-binding protein 3; 52.0 6.2 0.00021 29.7 1.8 48 296-343 20-70 (104)
357 2iwq_A Multiple PDZ domain pro 51.7 8 0.00027 30.5 2.5 47 296-343 37-85 (123)
358 1x5n_A Harmonin; PDZ domain, u 48.6 9.4 0.00032 29.3 2.4 26 317-342 40-65 (114)
359 2vz5_A TAX1-binding protein 3; 47.9 7.9 0.00027 31.3 1.9 47 296-343 39-89 (139)
360 1te0_A Protease DEGS; two doma 43.1 4 0.00014 37.9 -0.7 47 295-342 221-268 (318)
361 1i4k_A Putative snRNP SM-like 43.0 43 0.0015 23.8 5.2 33 19-51 16-48 (77)
362 3axa_A Afadin, nectin-3, prote 42.9 19 0.00067 27.0 3.4 28 316-343 36-64 (106)
363 2opg_A Multiple PDZ domain pro 41.1 34 0.0011 25.1 4.5 26 318-343 30-56 (98)
364 1d3b_B Protein (small nuclear 40.9 38 0.0013 25.0 4.7 32 19-50 16-47 (91)
365 1h64_1 SnRNP SM-like protein; 40.3 37 0.0013 24.0 4.4 33 19-51 16-48 (75)
366 1th7_A SnRNP-2, small nuclear 37.9 47 0.0016 23.9 4.7 33 19-51 21-53 (81)
367 1b34_B Protein (small nuclear 36.7 49 0.0017 25.9 4.9 34 18-51 40-73 (118)
368 3s6n_G Small nuclear ribonucle 36.3 48 0.0016 23.6 4.4 35 17-51 14-48 (76)
369 1nf3_C PAR-6B; semi-CRIB motif 36.3 4.1 0.00014 32.4 -1.6 46 297-343 44-91 (128)
370 1mgq_A SM-like protein; LSM, R 35.8 53 0.0018 23.8 4.7 33 19-51 27-59 (83)
371 1d3b_A Protein (small nuclear 35.5 68 0.0023 22.7 5.2 34 18-51 16-49 (75)
372 4emk_B U6 snRNA-associated SM- 34.6 56 0.0019 23.1 4.6 32 19-50 16-47 (75)
373 2ego_A General receptor for ph 34.6 37 0.0013 24.9 3.8 26 317-342 36-61 (96)
374 1ljo_A Archaeal SM-like protei 34.5 65 0.0022 22.9 4.9 33 19-51 17-50 (77)
375 3s6n_F Small nuclear ribonucle 34.3 63 0.0022 23.7 4.9 60 19-80 18-77 (86)
376 4emk_C U6 snRNA-associated SM- 33.7 60 0.0021 25.2 4.9 32 20-51 36-67 (113)
377 4emg_A Probable U6 snRNA-assoc 33.2 54 0.0019 24.5 4.4 34 18-51 20-53 (93)
378 1i8f_A Putative snRNP SM-like 32.5 59 0.002 23.4 4.5 32 19-50 23-54 (81)
379 4hcz_A PHD finger protein 1; p 32.5 87 0.003 21.3 4.8 31 22-52 12-42 (58)
380 3d3r_A Hydrogenase assembly ch 31.0 42 0.0014 25.8 3.5 43 30-77 26-72 (103)
381 3bw1_A SMX4 protein, U6 snRNA- 30.8 58 0.002 24.4 4.3 32 19-50 22-53 (96)
382 2jvf_A De novo protein M7; tet 30.3 58 0.002 23.2 3.8 24 256-279 6-29 (96)
383 2eqj_A Metal-response element- 29.8 95 0.0032 21.8 4.8 30 22-51 22-51 (66)
384 2he4_A Na(+)/H(+) exchange reg 28.0 25 0.00086 25.4 1.7 26 317-342 27-52 (90)
385 4emk_A U6 snRNA-associated SM- 27.9 75 0.0026 23.8 4.4 32 19-50 32-63 (94)
386 1b34_A Protein (small nuclear 27.8 1.7E+02 0.0059 22.7 6.8 62 18-81 13-74 (119)
387 2vwr_A Ligand of NUMB protein 27.7 24 0.0008 25.9 1.5 26 318-343 29-55 (95)
388 3hrz_D Complement factor B; se 27.3 35 0.0012 35.0 3.3 50 116-165 670-732 (741)
389 2qg1_A Multiple PDZ domain pro 27.1 24 0.00084 25.5 1.5 27 317-343 28-55 (92)
390 4emh_A Probable U6 snRNA-assoc 27.0 1E+02 0.0036 23.5 5.2 34 17-50 26-59 (105)
391 1m5z_A GRIP, AMPA receptor int 26.9 27 0.00092 25.2 1.7 25 318-342 32-56 (91)
392 3k6e_A CBS domain protein; str 26.1 32 0.0011 27.8 2.3 16 122-137 118-133 (156)
393 1g9o_A NHE-RF; PDZ domain, com 26.0 25 0.00086 25.4 1.4 25 318-342 27-51 (91)
394 2jxo_A Ezrin-radixin-moesin-bi 26.0 28 0.00097 25.6 1.7 26 317-342 32-57 (98)
395 2o8m_A Protease; NS3, NS4A, vi 26.0 50 0.0017 28.3 3.4 42 116-158 146-188 (200)
396 2eaq_A LIM domain only protein 25.9 25 0.00084 25.4 1.3 26 318-343 28-53 (90)
397 4esy_A CBS domain containing m 25.8 30 0.001 28.1 2.0 21 117-137 47-67 (170)
398 3nqr_A Magnesium and cobalt ef 25.6 34 0.0012 26.1 2.2 20 118-137 98-117 (127)
399 3pgw_B SM B; protein-RNA compl 25.1 71 0.0024 28.2 4.3 32 19-50 16-47 (231)
400 2w4f_A Protein LAP4; structura 25.1 30 0.001 25.3 1.7 28 316-343 32-59 (97)
401 2qkv_A Inactivation-NO-after-p 24.8 31 0.0011 25.4 1.7 25 318-342 31-56 (96)
402 3lfr_A Putative metal ION tran 24.7 36 0.0012 26.4 2.2 20 118-137 99-118 (136)
403 3i4w_A Disks large homolog 4; 24.4 28 0.00097 25.8 1.5 25 318-342 35-60 (104)
404 3gby_A Uncharacterized protein 24.3 39 0.0013 25.7 2.3 18 120-137 100-117 (128)
405 3khf_A Microtubule-associated 24.2 30 0.001 25.5 1.5 26 318-343 34-59 (99)
406 2pkt_A PDZ and LIM domain prot 24.1 27 0.00091 25.3 1.2 26 318-343 27-52 (91)
407 3hf7_A Uncharacterized CBS-dom 24.0 37 0.0013 26.1 2.2 20 118-137 99-118 (130)
408 2z1c_A Hydrogenase expression/ 24.0 67 0.0023 23.1 3.3 39 30-75 5-45 (75)
409 1n9r_A SMF, small nuclear ribo 23.7 98 0.0033 23.0 4.4 34 17-50 31-65 (93)
410 3i8n_A Uncharacterized protein 23.6 38 0.0013 25.9 2.2 20 118-137 101-120 (130)
411 3jtf_A Magnesium and cobalt ef 23.6 38 0.0013 26.0 2.1 20 118-137 98-117 (129)
412 1x5q_A LAP4 protein; PDZ domai 23.5 33 0.0011 25.8 1.7 28 316-343 44-71 (110)
413 1mfg_A ERB-B2 interacting prot 23.1 23 0.0008 25.9 0.7 27 316-343 33-59 (95)
414 3e17_A Tight junction protein 22.9 31 0.0011 25.0 1.4 25 319-343 22-47 (88)
415 2i1n_A Discs, large homolog 3; 22.9 35 0.0012 25.3 1.7 27 317-343 33-60 (102)
416 3tsv_A Tight junction protein 22.8 31 0.001 27.0 1.4 25 318-342 51-75 (124)
417 2pa1_A PDZ and LIM domain prot 22.7 29 0.001 24.8 1.2 26 318-343 26-51 (87)
418 2ejy_A 55 kDa erythrocyte memb 22.7 35 0.0012 25.5 1.7 25 318-342 36-61 (97)
419 3s6n_E Small nuclear ribonucle 22.7 1.1E+02 0.0037 22.7 4.4 27 25-51 38-64 (92)
420 1m5q_A SMAP3, small nuclear ri 22.5 1.2E+02 0.0041 24.1 4.9 33 19-51 12-44 (130)
421 1ihj_A INAD; intermolecular di 22.4 32 0.0011 25.2 1.4 27 317-343 36-63 (98)
422 2awx_A Synapse associated prot 22.3 34 0.0012 25.6 1.5 26 317-342 32-58 (105)
423 2eeh_A PDZ domain-containing p 22.3 35 0.0012 25.3 1.6 39 296-343 23-61 (100)
424 4amh_A Disks large homolog 1; 22.2 34 0.0012 25.8 1.5 26 317-342 31-57 (106)
425 3num_A Serine protease HTRA1; 22.1 19 0.00064 33.4 0.0 49 296-344 226-280 (332)
426 2fe5_A Presynaptic protein SAP 22.0 35 0.0012 24.7 1.5 28 316-343 31-59 (94)
427 1rrk_A Complement factor B; BB 21.9 52 0.0018 31.8 3.2 25 115-139 427-454 (497)
428 3kpb_A Uncharacterized protein 21.9 46 0.0016 24.8 2.3 20 118-137 92-111 (122)
429 1um1_A KIAA1849 protein, RSGI 21.5 37 0.0012 25.6 1.6 27 317-343 35-62 (110)
430 3lv9_A Putative transporter; C 21.1 46 0.0016 26.1 2.2 20 118-137 117-136 (148)
431 3oi8_A Uncharacterized protein 21.1 45 0.0015 26.6 2.2 20 118-137 132-151 (156)
432 2fwk_A U6 snRNA-associated SM- 21.1 65 0.0022 25.3 3.0 30 20-49 41-70 (121)
433 1uez_A KIAA1526 protein; PDZ d 20.8 39 0.0014 24.9 1.6 25 318-342 35-59 (101)
434 3k6e_A CBS domain protein; str 20.8 43 0.0015 27.0 2.0 22 116-137 45-66 (156)
435 2jil_A GRIP1 protein, glutamat 20.8 36 0.0012 24.9 1.4 27 317-343 31-58 (97)
436 1wi2_A Riken cDNA 2700099C19; 20.7 38 0.0013 25.2 1.5 26 318-343 41-66 (104)
437 3ij3_A Cytosol aminopeptidase; 20.7 55 0.0019 32.2 3.0 46 203-251 300-345 (482)
438 1hmj_A RPB5, protein (subunit 20.7 37 0.0013 24.7 1.4 20 204-223 36-57 (78)
439 3oco_A Hemolysin-like protein 20.7 42 0.0014 26.5 1.9 21 117-137 114-134 (153)
440 2v90_A PDZ domain-containing p 20.7 33 0.0011 25.0 1.2 26 317-342 29-54 (96)
441 2la8_A Inactivation-NO-after-p 20.6 33 0.0011 26.0 1.1 25 318-342 25-50 (106)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=1.6e-57 Score=461.60 Aligned_cols=339 Identities=47% Similarity=0.816 Sum_probs=299.2
Q ss_pred eeeccCCeeeeeccEEEEE-EEecCCCe------------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecC
Q 017471 3 ILWSTTRRLNSRNEALILS-TWLLCSPS------------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFG 63 (371)
Q Consensus 3 ~~~~~~~~~~~~gsg~vi~-~~~~~~~~------------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~ 63 (371)
.||+++++..+.||||+++ ++++++.| ++|++++.|+.+||||||++...++..++++.++
T Consensus 64 ~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLAvLkv~~~~~~~~~~pl~~g 143 (539)
T 4fln_A 64 LPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALLSVESEDFWKGAEPLRLG 143 (539)
T ss_dssp STTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEEEEEECCSSSSTTCCCCCBC
T ss_pred CccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEEEEEEeCCcCCcCCceeecC
Confidence 5899999999999999998 55555444 7999999999999999999988776678889999
Q ss_pred CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCC
Q 017471 64 ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED 143 (371)
Q Consensus 64 ~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~ 143 (371)
+++++||+|+++|||+++...++|.|+||++++..+..+.....+||+|++||||||||||+|.+|+||||+++.+...+
T Consensus 144 ~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPLvn~~GeVIGIntai~~~~~ 223 (539)
T 4fln_A 144 HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFNDQGECIGVAFQVYRSEE 223 (539)
T ss_dssp CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEEECSSSCEEEEECCCC----
T ss_pred CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchhccCCCcEEEEEEEEecCCC
Confidence 99999999999999999876799999999999887777777777899999999999999999999999999999876556
Q ss_pred ccceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCccccCCCCCCEEEE
Q 017471 144 VENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDIILS 223 (371)
Q Consensus 144 ~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~GL~~GDvIl~ 223 (371)
..+++||||++.+++++++|.++|++.+|+|||+.++++.++++++.+|++ ...|++|.+|.++|||+++||+||+|++
T Consensus 224 ~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~-~~~Gv~V~~V~~~spA~~al~~GDvI~~ 302 (539)
T 4fln_A 224 TENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVP-TNEGVLVRRVEPTSDASKVLKEGDVIVS 302 (539)
T ss_dssp -CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCS-SSBCEEEEEECTTSGGGGTCCTTCEEEE
T ss_pred CCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCC-CcCceeeecccCCChHHhCccCCCEEEE
Confidence 789999999999999999999999998899999999998899999999998 4689999999999999889999999999
Q ss_pred ECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccEEEec
Q 017471 224 FDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSR 303 (371)
Q Consensus 224 vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~ 303 (371)
+||++|.+.+++.++..+++.|.+++...++|++++++|+|+|+++++++++.+++...+.......|+|++++|++|++
T Consensus 303 idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~~~~~p~~~~~~Gl~f~~ 382 (539)
T 4fln_A 303 FDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHIDGGQPSYIIVAGLVFTP 382 (539)
T ss_dssp ETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCTTSSCCCCCCSTTEEEEE
T ss_pred ECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCccccccccccCCCccccccceEEee
Confidence 99999999999988888899999999999999999999999999999999999999988888888899999999999999
Q ss_pred h-HHHHHHcCcc-----------------cccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 304 C-LYLISVLSME-----------------RIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 304 l-~~~~~~~~~~-----------------~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
+ +.+.++++.. +...+++++.+.++|+++-...+-+|+|
T Consensus 383 Lt~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI 439 (539)
T 4fln_A 383 LSEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQV 439 (539)
T ss_dssp CCHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEE
T ss_pred CCHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEE
Confidence 9 5444343321 2346899999999999987655555543
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.8e-45 Score=368.13 Aligned_cols=310 Identities=20% Similarity=0.239 Sum_probs=252.3
Q ss_pred eeccCCeeeeeccEEEEE---EEecCCCe-----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecC
Q 017471 4 LWSTTRRLNSRNEALILS---TWLLCSPS-----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFG 63 (371)
Q Consensus 4 ~~~~~~~~~~~gsg~vi~---~~~~~~~~-----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~ 63 (371)
+|..++...+.||||+++ +++++++| ++|++++.|+.+||||||++... ++++++++
T Consensus 54 ~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~ 130 (436)
T 4a8c_A 54 PDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIA 130 (436)
T ss_pred ccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEEEeCCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEecc
Confidence 344445556789999997 46665555 79999999999999999997654 78999998
Q ss_pred CCC--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeeccc
Q 017471 64 ELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 141 (371)
Q Consensus 64 ~s~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~ 141 (371)
++. ..|++|+++|||++... +++.|+||+.++.... ......+||+|+++++|||||||+|.+|+||||+++.+..
T Consensus 131 ~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~r~~~~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~ 208 (436)
T 4a8c_A 131 DSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSGLN-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAP 208 (436)
T ss_pred CcccCCCCCEEEEEEcCCCCCc-cEEEEEEeeecccccC-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccC
Confidence 765 56899999999999876 9999999999875222 2233468999999999999999999999999999987764
Q ss_pred C-CccceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCC
Q 017471 142 E-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSD 219 (371)
Q Consensus 142 ~-~~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GD 219 (371)
. +..+++||||++.+++++++|.++|++. ++|||+.++++ +++.++.+|++ ...|++|.+|.++|||++ |||+||
T Consensus 209 ~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~-~~~G~~V~~V~~~spA~~aGL~~GD 285 (436)
T 4a8c_A 209 GGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGIKGTEM-SADIAKAFNLD-VQRGAFVSEVLPGSGSAKAGVKAGD 285 (436)
T ss_pred CCCceeEEEEEehHHHHHHHHHHHhccccc-cccCceEeccc-CHHHHHHhCCC-CCcceEEEEECCCChHHHCCCCCCC
Confidence 4 4568999999999999999999999998 99999999999 99999999998 467999999999999999 999999
Q ss_pred EEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccE
Q 017471 220 IILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGF 299 (371)
Q Consensus 220 vIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl 299 (371)
+|++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...+........ ...|+
T Consensus 286 ~I~~vnG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~-------~~~gl 348 (436)
T 4a8c_A 286 IITSLNGKPLNSFAELR----------SRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEM-------ITPAL 348 (436)
T ss_pred EEEEECCEECCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEECCCCcccccccc-------cccCc
Confidence 99999999999998875 56666778999999999999999999999876532211100 11343
Q ss_pred EEechHHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 300 VFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 300 ~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
....+. .....+...|+++..+.++|||+..-.+.+|+|
T Consensus 349 ~~~~~~----~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I 387 (436)
T 4a8c_A 349 EGATLS----DGQLKDGGKGIKIDEVVKGSPAAQAGLQKDDVI 387 (436)
T ss_pred eeeecc----cccccCCCCCEEEEEeCCCCHHHHcCCCCCCEE
Confidence 332220 011123446899999999999998877777766
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.3e-46 Score=377.56 Aligned_cols=310 Identities=22% Similarity=0.267 Sum_probs=246.4
Q ss_pred CCeeeeeccEEEEE---EEecCCCe-----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC-
Q 017471 8 TRRLNSRNEALILS---TWLLCSPS-----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP- 66 (371)
Q Consensus 8 ~~~~~~~gsg~vi~---~~~~~~~~-----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~- 66 (371)
.+...+.||||+++ +++++++| ++|++++.|+.+||||||++.. ++++++++++.
T Consensus 72 ~~~~~~~GSGfiI~~~~G~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~ 147 (451)
T 3pv2_A 72 GRKFESIGSGVIIDPNNGVIITNDHVIRNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDK 147 (451)
T ss_dssp -CEEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGG
T ss_pred CcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCccc
Confidence 45567889999997 46665544 7999999999999999999864 68999998765
Q ss_pred -CCCCeEEEEEeCCCCC----CceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeeccc
Q 017471 67 -ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 141 (371)
Q Consensus 67 -~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~ 141 (371)
..||+|+++|||++.. ..+++.|+||+..+.... ......+||+|+++++|||||||+|.+|+||||+++.+..
T Consensus 148 ~~~G~~V~aiG~P~G~~~~~~~~~vt~Givs~~~r~~~~-~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~ 226 (451)
T 3pv2_A 148 LEVGDFVVAIGNPFGLNSFGNSQSATFGIVSALKRSDLN-IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSP 226 (451)
T ss_dssp CCTTCEEEEEECCCCC-----CCEEEEEEEEEEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC--
T ss_pred CCCCCEEEEEECCCCccccccCCceeEEEEeeccccccC-CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecC
Confidence 5689999999999876 149999999999865222 2233457999999999999999999999999999987754
Q ss_pred C-CccceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCC
Q 017471 142 E-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSD 219 (371)
Q Consensus 142 ~-~~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GD 219 (371)
. +..+++||||++.+++++++|.++|++. ++|||++++++ ++++++.+|++....|++|.+|.++|||++ |||+||
T Consensus 227 ~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GD 304 (451)
T 3pv2_A 227 YGGNVGIGFAIPINMVKDVAQQIIKFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGD 304 (451)
T ss_dssp ----CCCEEEEEHHHHHHHHHHHHHHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTC
T ss_pred CCCccceeeeehhHHHHHHHHHHHhcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCC
Confidence 3 4568999999999999999999999998 99999999999 999999999985448999999999999999 999999
Q ss_pred EEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccE
Q 017471 220 IILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGF 299 (371)
Q Consensus 220 vIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl 299 (371)
+|++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...+............ ..|+
T Consensus 305 vI~~vnG~~v~~~~~l~----------~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~~~~----~~G~ 370 (451)
T 3pv2_A 305 IITQINDTKITQATQVK----------TTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSNNPF----LYGL 370 (451)
T ss_dssp EEEEETTEECCSHHHHH----------HHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHHSTT----TTTE
T ss_pred EEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccccccccc----cccc
Confidence 99999999999998865 677777899999999999999999999987654221100000011 3677
Q ss_pred EEech-HHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 300 VFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 300 ~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.+.++ +... ......|++|..+.++|||+..-...+|+|
T Consensus 371 ~l~~~~~~~~----~~~~~~Gv~V~~V~~gspA~~aGL~~GD~I 410 (451)
T 3pv2_A 371 ALRAFEQESP----PHGNVIGVQVVGASENSAGWRAGIRPGDII 410 (451)
T ss_dssp EEEEEEEECT----TSCEEEEEEEEEECTTSHHHHHTCCTTCEE
T ss_pred ccccCChhHh----cccCCCceEEEEECCCCHHHHcCCCCCCEE
Confidence 77654 2211 112457899999999999998888888765
No 4
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=8.4e-45 Score=352.81 Aligned_cols=260 Identities=23% Similarity=0.322 Sum_probs=221.3
Q ss_pred eeccCCeeeeeccEEEEE---EEecCCC-----------------eEeEEEEEecCCCCEEEEEEecCCCcCCccceecC
Q 017471 4 LWSTTRRLNSRNEALILS---TWLLCSP-----------------SAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFG 63 (371)
Q Consensus 4 ~~~~~~~~~~~gsg~vi~---~~~~~~~-----------------~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~ 63 (371)
+|..++...+.||||+++ +++++++ .++|++++.|+.+||||||++... .+++++++
T Consensus 54 ~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~ 130 (345)
T 3stj_A 54 PDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIA 130 (345)
T ss_dssp -----CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEECTTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBC
T ss_pred ccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEEeCCCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeec
Confidence 454455567889999997 3665544 479999999999999999997654 78999998
Q ss_pred CCC--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeeccc
Q 017471 64 ELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 141 (371)
Q Consensus 64 ~s~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~ 141 (371)
++. ..|++|+++|||++... +++.|+||+..+..... .....++|+|+++++|||||||+|.+|+||||+++.+..
T Consensus 131 ~s~~~~~G~~V~aiG~p~g~~~-~vt~G~Vs~~~~~~~~~-~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~ 208 (345)
T 3stj_A 131 DSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSGLNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAP 208 (345)
T ss_dssp CGGGCCTTBEEEEEECGGGCSC-EEEEEEEEEEEECCSSS-SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECT
T ss_pred CcccCCCCCEEEEEECCCCCCC-cEEeeEEeeecccccCC-CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccC
Confidence 765 56899999999999776 99999999998752222 223457999999999999999999999999999987764
Q ss_pred C-CccceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCC
Q 017471 142 E-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSD 219 (371)
Q Consensus 142 ~-~~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GD 219 (371)
. +..+++||||++.+++++++|.+.|++. ++|||+.++++ ++++++.+|++ ...|++|.+|.++|||++ |||+||
T Consensus 209 ~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lGv~~~~~-~~~~a~~~gl~-~~~G~~V~~V~~~spA~~aGL~~GD 285 (345)
T 3stj_A 209 GGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGIKGTEM-SADIAKAFNLD-VQRGAFVSEVLPGSGSAKAGVKAGD 285 (345)
T ss_dssp TSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-CHHHHHHTTCS-CCSSEEEEEECTTSHHHHHTCCTTC
T ss_pred CCCcceeEEEEehHHHHHHHHHHHhccccc-ccccceeeEee-cHHHHHhcCCC-CCceEEEEEeccCChHHHcCCCCCC
Confidence 4 4568999999999999999999999998 99999999999 99999999998 468999999999999999 999999
Q ss_pred EEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecccccc
Q 017471 220 IILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRL 281 (371)
Q Consensus 220 vIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~ 281 (371)
+|++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...++.
T Consensus 286 vI~~ing~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~ 337 (345)
T 3stj_A 286 IITSLNGKPLNSFAELR----------SRIATTEPGTKVKLGLLRNGKPLEVEVTLDTSTSS 337 (345)
T ss_dssp EECEETTEECSCHHHHH----------HHHHTSCTTCEEEEEEEETTEEEEEEEECEEC---
T ss_pred EEEEECCEECCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEcccCCC
Confidence 99999999999998875 67777789999999999999999999999876654
No 5
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.9e-44 Score=361.59 Aligned_cols=303 Identities=20% Similarity=0.279 Sum_probs=212.3
Q ss_pred eeeeeccEEEEE---EEec-----------------CCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--C
Q 017471 10 RLNSRNEALILS---TWLL-----------------CSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP--A 67 (371)
Q Consensus 10 ~~~~~gsg~vi~---~~~~-----------------~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~--~ 67 (371)
...+.||||+++ ++++ +++.++|++++.|+.+||||||++... ++++++|+++. +
T Consensus 83 ~~~~~GSG~ii~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~ 159 (448)
T 1ky9_A 83 KFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALR 159 (448)
T ss_dssp EEEEEEEEEEEETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCC
T ss_pred ccccEEEEEEEECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCC
Confidence 345679999997 3554 455589999999999999999998643 78999999865 5
Q ss_pred CCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC-Cccc
Q 017471 68 LQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVEN 146 (371)
Q Consensus 68 lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~ 146 (371)
+||+|+++|||++... +++.|+||+..+... .......+||+|+++++|||||||+|.+|+||||+++.+..+ +..+
T Consensus 160 ~G~~V~aiG~P~g~~~-tvt~Givs~~~r~~~-~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g 237 (448)
T 1ky9_A 160 VGDYTVAIGNPFGLGE-TVTSGIVSALGRSGL-NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIG 237 (448)
T ss_dssp TTCEEEEEECTTSSSC-EEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSS
T ss_pred CCCEEEEEECCCCCCC-eEEeEEEeecccccc-CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccc
Confidence 7899999999999766 999999999986411 112234579999999999999999999999999999877543 3568
Q ss_pred eeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEEC
Q 017471 147 IGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFD 225 (371)
Q Consensus 147 ~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vn 225 (371)
++||||++.+++++++|.++|++. ++|||+.++++ ++++++.+|++ ...|++|.+|.++|||++ ||++||+|++||
T Consensus 238 ~gfaIP~~~~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~-~~~G~~V~~V~~gspA~~AGL~~GDvI~~in 314 (448)
T 1ky9_A 238 IGFAIPSNMVKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVD-AQRGAFVSQVLPNSSAAKAGIKAGDVITSLN 314 (448)
T ss_dssp SEEEEEHHHHHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCT-TCCSEECCCCTTCSSSTTTTCCTTCEECBSS
T ss_pred eeeeeecccchhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCC-CCCceEEEEeccCCHHHHcCCCCCCEEEEEC
Confidence 999999999999999999999998 99999999999 88999999998 457999999999999999 999999999999
Q ss_pred CEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccEEEechH
Q 017471 226 GIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCL 305 (371)
Q Consensus 226 G~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~ 305 (371)
|++|.++.++. ..+....+|++++++|.|+|+.+++++++...+....... .....+.|+.++++
T Consensus 315 G~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~~----~~~~~~~G~~l~~~- 379 (448)
T 1ky9_A 315 GKPISSFAALR----------AQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSS----SIFNGIEGAEMSNK- 379 (448)
T ss_dssp SSBCCSSHHHH----------HHTTSSBTTCCCEEEEESSSCEEECCCC-------------------------------
T ss_pred CEEcCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcccccc----cccccccceEeecc-
Confidence 99999998865 5666667899999999999999888887754332110000 00111346654332
Q ss_pred HHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhHHH
Q 017471 306 YLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWC 344 (371)
Q Consensus 306 ~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~~ 344 (371)
....++++..+.++|||+..-...+|+|.-
T Consensus 380 ---------~~~~gv~V~~V~~gspA~~aGL~~GDiI~~ 409 (448)
T 1ky9_A 380 ---------GKDQGVVVNNVKTGTPAAQIGLKKGDVIIG 409 (448)
T ss_dssp ---------------------------------------
T ss_pred ---------CCCCeEEEEEecCCCHHHHcCCCCCCEEEE
Confidence 123678999999999999888888888753
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=3.5e-41 Score=324.13 Aligned_cols=252 Identities=21% Similarity=0.346 Sum_probs=213.1
Q ss_pred eeeeeccEEEEE--EEec-----------------CCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCC--CCC
Q 017471 10 RLNSRNEALILS--TWLL-----------------CSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGEL--PAL 68 (371)
Q Consensus 10 ~~~~~gsg~vi~--~~~~-----------------~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s--~~l 68 (371)
...+.|+||+++ ++++ +++.++|++++.|+.+||||||++... .+++++|+++ ...
T Consensus 39 ~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~ 115 (318)
T 1te0_A 39 EIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLIIKATG---GLPTIPINARRVPHI 115 (318)
T ss_dssp EEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCT
T ss_pred ccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEeCCCceEEEEEEeCCC---CCceEEeeCccCCCC
Confidence 345668888886 3444 455589999999999999999999863 6889999875 357
Q ss_pred CCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC----Cc
Q 017471 69 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE----DV 144 (371)
Q Consensus 69 gd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~----~~ 144 (371)
|++|+++|||++... +++.|+|++..+..+.. .....+|++|+++++|+|||||+|.+|+||||+++..... +.
T Consensus 116 G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~-~~~~~~i~~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~ 193 (318)
T 1te0_A 116 GDVVLAIGNPYNLGQ-TITQGIISATGRIGLNP-TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETP 193 (318)
T ss_dssp TCEEEEECCCSSSSC-CEEEEEEEECCCCCCCT-TCSCCSEEESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSC
T ss_pred CCEEEEEEcCCCCCC-cEEeeEEecccccccCC-CCcCCEEEECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccc
Confidence 899999999998765 89999999887542221 1233579999999999999999999999999998876432 34
Q ss_pred cceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEE
Q 017471 145 ENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILS 223 (371)
Q Consensus 145 ~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~ 223 (371)
.+++||||++.+++++++|.++|++. ++|||+.++++ +++.++.+|++ ...|++|.+|.++|||++ |||+||+|++
T Consensus 194 ~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~~~~~~g~~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ 270 (318)
T 1te0_A 194 EGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APLHAQGGGID-QLQGIVVNEVSPDGPAANAGIQVNDLIIS 270 (318)
T ss_dssp CSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCCCSSSSCSS-SCCCEEEEEECTTSTTTTTCCCTTCCEEE
T ss_pred cceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chhHHHhccCC-CCCcEEEEEeCCCChHHHCCCCCCCEEEE
Confidence 68899999999999999999999998 99999999999 77788889987 457999999999999999 9999999999
Q ss_pred ECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecccc
Q 017471 224 FDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 279 (371)
Q Consensus 224 vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 279 (371)
|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...+
T Consensus 271 ing~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 316 (318)
T 1te0_A 271 VDNKPAISALETM----------DQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYP 316 (318)
T ss_dssp ETTEECCCHHHHH----------HHHHTSCTTCEEEEEEESSSCEEEEEEECEECC
T ss_pred ECCEEcCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEEccCC
Confidence 9999999988765 666666789999999999999999999987654
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-39 Score=315.68 Aligned_cols=248 Identities=23% Similarity=0.370 Sum_probs=209.0
Q ss_pred eeeccEEEEE--EEecCCCe-----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--CCCC
Q 017471 12 NSRNEALILS--TWLLCSPS-----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP--ALQD 70 (371)
Q Consensus 12 ~~~gsg~vi~--~~~~~~~~-----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~--~lgd 70 (371)
.+.||||+++ +++++++| ++|++++.|+.+||||||++.+. ..+++++++++. ..|+
T Consensus 52 ~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~~v~~d~~~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~ 129 (348)
T 3qo6_A 52 QGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRIDAPK--NKLRPIPVGVSADLLVGQ 129 (348)
T ss_dssp EEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEEEGGGTEEEEECCCCG--GGCCCCCBCCSTTCCTTC
T ss_pred CceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEEEEEEEEEcCcCCEEEEEEcCCC--CCceeEEecCcccCCCCC
Confidence 4578999998 46655444 79999999999999999999752 257889998755 4689
Q ss_pred eEEEEEeCCCCCCceeeeeEEeeeeeeecc--CCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC-Cccce
Q 017471 71 AVTVVGYPIGGDTISVTSGVVSRIEILSYV--HGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENI 147 (371)
Q Consensus 71 ~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~--~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~ 147 (371)
.|+++|||++... +++.|+|+.+.+.... .+.....++++|+++++|||||||+|.+|+||||+++.+... +..++
T Consensus 130 ~v~~iG~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~ 208 (348)
T 3qo6_A 130 KVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGV 208 (348)
T ss_dssp EEEEEECGGGCTT-EEEEEEEEEEEEEECCSSSSSCEEEEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSC
T ss_pred EEEEEECCCCCCC-cEeEEEEEeeccccccccCCCcccCEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccE
Confidence 9999999998776 8999999998865332 223345679999999999999999999999999999877544 35789
Q ss_pred eccccCcchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCC---------
Q 017471 148 GYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKP--------- 217 (371)
Q Consensus 148 ~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~--------- 217 (371)
+||||++.++++++++.+.|++. ++|||+++.+. ...+.+++ .|++|.+|.++|||++ |||+
T Consensus 209 gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~---~~~~~~~~----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l 280 (348)
T 3qo6_A 209 GFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD---QSVEQLGV----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRL 280 (348)
T ss_dssp EEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---TTTTTTTC----SSEEEEECCSSSHHHHHTCCCCEECSSSCE
T ss_pred EEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---hhhhhcCC----ceEEEEEecCCChHHHcCCccccccccCCC
Confidence 99999999999999999999999 99999998754 22334443 6999999999999999 9999
Q ss_pred --CCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccc
Q 017471 218 --SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280 (371)
Q Consensus 218 --GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~ 280 (371)
||+|++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...+.
T Consensus 281 ~~GDvI~~ing~~v~~~~dl~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~ 335 (348)
T 3qo6_A 281 VLGDIITSVNGTKVSNGSDLY----------RILDQCKVGDEVTVEVLRGDHKEKISVTLEPKPD 335 (348)
T ss_dssp ECCCEECEETTBCCSSSHHHH----------HHHTTCCTTCEEEEEEECSSSEEEEEEECEECC-
T ss_pred CCCCEEEEECCEEeCCHHHHH----------HHHHhCCCcCEEEEEEEECCEEEEEEEEEccCCC
Confidence 9999999999999999875 6777778899999999999999999999987654
No 8
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.5e-38 Score=306.63 Aligned_cols=250 Identities=22% Similarity=0.345 Sum_probs=198.6
Q ss_pred eccCCeeeeeccEEEEE--EEecC-----------------CCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCC
Q 017471 5 WSTTRRLNSRNEALILS--TWLLC-----------------SPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGEL 65 (371)
Q Consensus 5 ~~~~~~~~~~gsg~vi~--~~~~~-----------------~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s 65 (371)
|..+....+.|+||+++ +++++ ++.++|++++.|+.+||||||++... .+++++|+++
T Consensus 39 ~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~d~~~DlAllkl~~~~---~~~~~~l~~~ 115 (325)
T 1lcy_A 39 FLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAVDPVADIATLRIQTKE---PLPTLPLGRS 115 (325)
T ss_dssp TTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEEETTTTEEEEECCCSS---CCCCCCBCCG
T ss_pred cCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEECCCCCEEEEEEcCCC---CCceEEeccc
Confidence 43333445779999998 35554 44478999999999999999999764 6889999875
Q ss_pred C--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCC--CeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeeccc
Q 017471 66 P--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 141 (371)
Q Consensus 66 ~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~--~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~ 141 (371)
. ..|++|+++|||++... +++.|+|++..+.....+ .....+|++|+++++|||||||+|.+|+||||++...
T Consensus 116 ~~~~~G~~v~~~G~p~~~~~-~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~-- 192 (325)
T 1lcy_A 116 ADVRQGEFVVAMGSPFALQN-TITSGIVSSAQRPARDLGLPQTNVEYIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKV-- 192 (325)
T ss_dssp GGCCTTCEEEECCCTTSSSS-CCEEEEBCSCSCC---------CCCCEEESSCCSTTTTTSEEEETTSCEEEEEEEEE--
T ss_pred ccCCCCCEEEEEECCCCCCC-cEEeEEEecccccccccCCCCCCCCEEEEcCCCCCCCccccEECCCCEEEEEEeEee--
Confidence 3 56899999999998765 899999998875321111 1223579999999999999999999999999998765
Q ss_pred CCccceeccccCcchhHhHhhhhhC------CeeecccccceeeeEcCCHHHHHhccCCC-----CCCceEEEEECCCCc
Q 017471 142 EDVENIGYVIPTPVIMHFIQDYEKN------GAYTGFPLLGVEWQKMENPDLRVAMSMKA-----DQKGVRIRRVDPTAP 210 (371)
Q Consensus 142 ~~~~~~~~aiP~~~i~~~l~~L~~~------g~~~g~~~lGi~~~~~~~~~~~~~~gl~~-----~~~gv~V~~V~~~sp 210 (371)
..+++||||++.++++++++.+. +.+. ++|+|+.+.++ +++.++.++++. ...|++|.+|.++||
T Consensus 193 --~~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l-~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~sp 268 (325)
T 1lcy_A 193 --TAGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSP 268 (325)
T ss_dssp --ETTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-CHHHHHHHTTSCTTSCCCSSCEEEEEECTTSH
T ss_pred --cCCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-CHHHHHhhCccccccccCCCCeEEEEeCcCCh
Confidence 25789999999999999998764 3455 89999999999 899999998853 247999999999999
Q ss_pred ccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 017471 211 ESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277 (371)
Q Consensus 211 A~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 277 (371)
|++ |||+||+|++|||++|.++.++. +.+. .+++++++|.|+|+.+++++++..
T Consensus 269 A~~aGl~~GDvI~~ing~~v~~~~~l~----------~~l~---~~~~v~l~v~R~g~~~~~~v~~~~ 323 (325)
T 1lcy_A 269 AHRAGLRPGDVILAIGEQMVQNAEDVY----------EAVR---TQSQLAVQIRRGRETLTLYVTPEV 323 (325)
T ss_dssp HHHHTCCTTCEEEEETTEECCSHHHHH----------HHHT---TCSSEEEEEEETTEEEEEEECCEE
T ss_pred HHHCCCCCCCEEEEECCEEcCCHHHHH----------HHHh---CCCeEEEEEEECCEEEEEEEEEec
Confidence 999 99999999999999999988764 4443 268899999999999998887653
No 9
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.5e-37 Score=299.59 Aligned_cols=233 Identities=22% Similarity=0.308 Sum_probs=194.4
Q ss_pred EEEecCCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeee
Q 017471 21 STWLLCSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILS 98 (371)
Q Consensus 21 ~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~ 98 (371)
.+++.+++.++|++++.|+.+||||||++.+. .+++++|+++. ..|++|+++|||++... +++.|+|++..+..
T Consensus 67 ~V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~G~vs~~~~~~ 142 (324)
T 1y8t_A 67 TVTFSDGRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLEG-TVTTGIVSALNRPV 142 (324)
T ss_dssp EEEETTCCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEE
T ss_pred EEEeCCCCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCCC-cEeeeEEeeccccc
Confidence 34445667789999999999999999999753 78999998753 57899999999998765 89999999887542
Q ss_pred ccCC-----CeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC--------CccceeccccCcchhHhHhhhhh
Q 017471 99 YVHG-----STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE--------DVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 99 ~~~~-----~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~--------~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
...+ .....+|++|+++++|||||||+|.+|+||||+++..... +..+++||||++.+++++++|.+
T Consensus 143 ~~~~~~g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~ 222 (324)
T 1y8t_A 143 STTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELIS 222 (324)
T ss_dssp CC-------CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHH
T ss_pred ccccccCcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHH
Confidence 2111 1234679999999999999999999999999998876432 23578999999999999999999
Q ss_pred CCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccch
Q 017471 166 NGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIG 244 (371)
Q Consensus 166 ~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~ 244 (371)
+|++. ++|||+.+... ....|++|.+|.++|||++ |||+||+|++|||++|.++.++.
T Consensus 223 ~g~~~-~~~lGi~~~~~------------~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~-------- 281 (324)
T 1y8t_A 223 TGKAS-HASLGVQVTND------------KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALV-------- 281 (324)
T ss_dssp HSCCC-CEECCEEEESC------------SSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHH--------
T ss_pred cCCcc-ccccceEeeec------------cCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHH--------
Confidence 99988 89999998754 1347899999999999999 99999999999999999988764
Q ss_pred hhhhhhccCCCCEEEEEEEE-CCEEEEEEEEeccccc
Q 017471 245 FSYLVSQKYTGDSAAVKVLR-DSKILNFNITLATHRR 280 (371)
Q Consensus 245 ~~~~~~~~~~g~~v~l~v~R-~g~~~~~~v~l~~~~~ 280 (371)
..+....+|++++++|.| +|+.+++++++...+.
T Consensus 282 --~~l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~~ 316 (324)
T 1y8t_A 282 --AAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 316 (324)
T ss_dssp --HHHHTSCTTCEEEEEEECSSCCEEEEEEECEEC--
T ss_pred --HHHHhcCCCCEEEEEEEECCCCEEEEEEEEccCCC
Confidence 566666789999999999 9999999999876543
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=5e-38 Score=303.90 Aligned_cols=254 Identities=18% Similarity=0.283 Sum_probs=116.5
Q ss_pred eeccCCeeeeeccEEEEE--EEecCCCe-----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecCC
Q 017471 4 LWSTTRRLNSRNEALILS--TWLLCSPS-----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFGE 64 (371)
Q Consensus 4 ~~~~~~~~~~~gsg~vi~--~~~~~~~~-----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~ 64 (371)
+|.......+.||||+++ +++++++| ++|++++.|+.+||||||++.+. .++++.+++
T Consensus 37 ~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~~~~~d~~~DlAlL~l~~~~---~~~~~~l~~ 113 (332)
T 3num_A 37 PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQG---KLPVLLLGR 113 (332)
T ss_dssp TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEEEEEEETTTTEEEEEECCSS---CCCCCCBCC
T ss_pred ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEEEEEecCCCCeEEEEEcCCC---CCceeeecC
Confidence 355445556789999998 46666555 78999999999999999999764 678888886
Q ss_pred CC--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccC--CCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecc
Q 017471 65 LP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH--GSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLK 140 (371)
Q Consensus 65 s~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~--~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~ 140 (371)
+. ..|+.|+++|||++... +++.|+|+...+..... ......++++|+++++|||||||+|.+|+||||++...
T Consensus 114 ~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~- 191 (332)
T 3num_A 114 SSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKV- 191 (332)
T ss_dssp TTSCCTTCEEEEECC-----C-CEEEEEEEEC--------------CCEEESSCCCTTTTTSEEEETTSCEEEEEEEEE-
T ss_pred cccCCCCCEEEEEECCCCCCc-ceeeeEEEeecccccccCcCCCcCCEEEEECCcCCCCcHHHhhCCCCcEEEEEeeEe-
Confidence 54 46899999999998775 89999999886532111 11223579999999999999999999999999998765
Q ss_pred cCCccceeccccCcchhHhHhhhhh---C--CeeecccccceeeeEcCCHHHHHhcc-----CCCCCCceEEEEECCCCc
Q 017471 141 HEDVENIGYVIPTPVIMHFIQDYEK---N--GAYTGFPLLGVEWQKMENPDLRVAMS-----MKADQKGVRIRRVDPTAP 210 (371)
Q Consensus 141 ~~~~~~~~~aiP~~~i~~~l~~L~~---~--g~~~g~~~lGi~~~~~~~~~~~~~~g-----l~~~~~gv~V~~V~~~sp 210 (371)
..+++||||++.++++++++.+ . +.+. ++|||+.+.++ +++.++.++ ++....|++|.+|.++||
T Consensus 192 ---~~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~~-~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~sp 266 (332)
T 3num_A 192 ---TAGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMSL-TSSKAKELKDRHRDFPDVISGAYIIEVIPDTP 266 (332)
T ss_dssp ---ETTEEEEEEHHHHHHHHHHHCC-------------------------------------------------------
T ss_pred ---cccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEec-CHHHhhhhhhhccccCCCCCceEEEEeccCCC
Confidence 3679999999999999998753 2 2344 89999999988 665555443 443457999999999999
Q ss_pred ccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccccc
Q 017471 211 ESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRR 280 (371)
Q Consensus 211 A~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~ 280 (371)
|++ |||+||+|++|||++|.++.++. ..+. .|++++++|.|+|+.+++++++...+.
T Consensus 267 A~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~---~~~~v~l~v~R~g~~~~~~v~p~~~~~ 324 (332)
T 3num_A 267 AEAGGLKENDVIISINGQSVVSANDVS----------DVIK---RESTLNMVVRRGNEDIMITVIPEEIDP 324 (332)
T ss_dssp -----------------------------------------------------------------------
T ss_pred hHHcCCCCCCEEEEECCEECCCHHHHH----------HHHh---CCCeEEEEEEECCEEEEEEEEEeeecc
Confidence 999 99999999999999999999875 3443 388899999999999999998876544
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.93 E-value=8.7e-26 Score=208.30 Aligned_cols=162 Identities=24% Similarity=0.370 Sum_probs=124.0
Q ss_pred eeeccEEEEE--EEecCC-----------------CeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--CCCC
Q 017471 12 NSRNEALILS--TWLLCS-----------------PSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP--ALQD 70 (371)
Q Consensus 12 ~~~gsg~vi~--~~~~~~-----------------~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~--~lgd 70 (371)
.+.|+||+++ .+++++ +.++|++++.|+.+||||||++.+. +.+++++|+++. ..|+
T Consensus 55 ~~~gsG~iI~~~g~ILTnaHvv~~~~~i~V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~ 132 (239)
T 1l1j_A 55 ASLGSGFIFDPEGYILTNYHVVGGADNITVTMLDGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGE 132 (239)
T ss_dssp EEEEEEEEEETTTEEEEEHHHHSSCSSCEEECTTSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTC
T ss_pred CceEEEEEEeCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCcccc
Confidence 5679999998 355544 4478999999999999999999752 278999998764 5789
Q ss_pred eEEEEEeCCCCCCceeeeeEEeeeeeeeccCC--CeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCcccee
Q 017471 71 AVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIG 148 (371)
Q Consensus 71 ~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~--~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~ 148 (371)
+|+++|||++... +++.|+||+..+...... .....+||+|+++++|||||||+|.+|+||||+++.....+..+++
T Consensus 133 ~v~~iG~p~g~~~-~vt~Givs~~~r~~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~ 211 (239)
T 1l1j_A 133 WAIAIGNPLGFQH-TVTVGVVSATNRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLG 211 (239)
T ss_dssp EEEEEECTTSSSC-EEEEEEEEEEEEEEECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCE
T ss_pred EEEEEECCCCCCC-cEEEEEEeccccccccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceE
Confidence 9999999998765 899999999886522221 1244689999999999999999999999999998876522346899
Q ss_pred ccccCcchhHhHhhhhhCCeeecccccce
Q 017471 149 YVIPTPVIMHFIQDYEKNGAYTGFPLLGV 177 (371)
Q Consensus 149 ~aiP~~~i~~~l~~L~~~g~~~g~~~lGi 177 (371)
||||++.+++++++|.++|++. |+|||+
T Consensus 212 faIP~~~~~~~~~~l~~~g~v~-r~~lGv 239 (239)
T 1l1j_A 212 FAIPINTVKKFLDTILTQKKVE-KAYLGV 239 (239)
T ss_dssp EEEEHHHHHHHHGGGCC------------
T ss_pred EEEEHHHHHHHHHHHHHCCCCc-cceeCc
Confidence 9999999999999999999999 999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.93 E-value=4.9e-26 Score=210.61 Aligned_cols=165 Identities=21% Similarity=0.277 Sum_probs=125.6
Q ss_pred eeccCCeeeeeccEEEEE---EEecCCCe-----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecC
Q 017471 4 LWSTTRRLNSRNEALILS---TWLLCSPS-----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFG 63 (371)
Q Consensus 4 ~~~~~~~~~~~gsg~vi~---~~~~~~~~-----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~ 63 (371)
+|..++...+.||||+++ +++++++| ++|++++.|+.+||||||++... .+++++++
T Consensus 54 ~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~ 130 (245)
T 3sti_A 54 PDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIA 130 (245)
T ss_dssp ----------CCEEEEEETTTTEEEECGGGC----CEEEECTTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBC
T ss_pred cccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEEECCCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeec
Confidence 344444556789999997 36665555 79999999999999999998654 78999998
Q ss_pred CCC--CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeeccc
Q 017471 64 ELP--ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKH 141 (371)
Q Consensus 64 ~s~--~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~ 141 (371)
++. ..|++|+++|||++... +++.|+|++..+..... .....+|++|+++++|||||||+|.+|+||||+++.+..
T Consensus 131 ~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~~~~~~~-~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~ 208 (245)
T 3sti_A 131 DSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRSGLNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAP 208 (245)
T ss_dssp CGGGCCTTBEEEEEECGGGSCC-EEEEEEEEECSSCSSCC-TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC--
T ss_pred CcCCCCCCCEEEEEECCCCCCC-cEEeeEEeeecccccCC-CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECC
Confidence 754 57899999999999776 99999999987642221 223357999999999999999999999999999987754
Q ss_pred C-CccceeccccCcchhHhHhhhhhCCeeecccc
Q 017471 142 E-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPL 174 (371)
Q Consensus 142 ~-~~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~ 174 (371)
. +..+++||||++.+++++++|++.|++. ++|
T Consensus 209 ~~~~~g~~faIP~~~~~~~~~~l~~~g~~~-~~~ 241 (245)
T 3sti_A 209 GGGSVGIGFAIPSNMARTLAQQLIDFGEIL-EHH 241 (245)
T ss_dssp ----CCCEEEEEHHHHHHHHHHHHHHHHHC----
T ss_pred CCCcceEEEEEeHHHHHHHHHHHHHcCCCC-Ccc
Confidence 3 4568999999999999999999988877 554
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.90 E-value=5.3e-24 Score=196.03 Aligned_cols=161 Identities=20% Similarity=0.330 Sum_probs=129.9
Q ss_pred CCeeeeeccEEEEE--EEecC-----------------CCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--
Q 017471 8 TRRLNSRNEALILS--TWLLC-----------------SPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP-- 66 (371)
Q Consensus 8 ~~~~~~~gsg~vi~--~~~~~-----------------~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~-- 66 (371)
.....+.||||+++ +++++ ++.++|++++.|+.+||||||++... .+++++++++.
T Consensus 48 ~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~ 124 (237)
T 3lgi_A 48 QLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGSDSLTDLAVLKINATG---GLPTIPINARRVP 124 (237)
T ss_dssp SCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCC
T ss_pred ccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccC
Confidence 34456789999998 35554 44479999999999999999999864 57888887643
Q ss_pred CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC----
Q 017471 67 ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE---- 142 (371)
Q Consensus 67 ~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~---- 142 (371)
..|+.|+++|||++... +++.|+|+...+..... .....++++|+++++|+|||||+|.+|+||||+++.+...
T Consensus 125 ~~G~~v~~~G~p~~~~~-~~~~g~vs~~~~~~~~~-~~~~~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~ 202 (237)
T 3lgi_A 125 HIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNP-TGRQNFLQTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGE 202 (237)
T ss_dssp CTTBEEEEEECGGGSCS-EEEEEEEEEECCSSCCT-TSCSCCEEECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSC
T ss_pred CCCCEEEEEECCCCCCC-cEEEEEEEecccccccC-CCcCCEEEEcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCc
Confidence 56899999999998765 89999999887643322 2233569999999999999999999999999998866542
Q ss_pred CccceeccccCcchhHhHhhhhhCCeeecccc
Q 017471 143 DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPL 174 (371)
Q Consensus 143 ~~~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~ 174 (371)
+..+++||||++.+++++++|.++|++. ++|
T Consensus 203 ~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~ 233 (237)
T 3lgi_A 203 TPEGIGFAIPFQLATKIMDKLIRDGRVI-RHH 233 (237)
T ss_dssp CCCSCEEEEEHHHHHHHHHHHHHHSSCC-C--
T ss_pred CcCceEEEEEHHHHHHHHHHHHHcCCCC-Cch
Confidence 2567899999999999999999999887 554
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.86 E-value=3.9e-22 Score=182.92 Aligned_cols=150 Identities=20% Similarity=0.321 Sum_probs=117.3
Q ss_pred CCeeeeeccEEEEE--EEecCCC-----------------eEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCC--
Q 017471 8 TRRLNSRNEALILS--TWLLCSP-----------------SAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELP-- 66 (371)
Q Consensus 8 ~~~~~~~gsg~vi~--~~~~~~~-----------------~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~-- 66 (371)
.....+.||||+++ +++++++ .++|+++..|+.+||||||++... .+++++++++.
T Consensus 58 ~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~v~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~ 134 (231)
T 3tjo_A 58 REVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKDVDEKADIALIKIDHQG---KLPVLLLGRSSEL 134 (231)
T ss_dssp CEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEEEEEEETTTTEEEEECCCSS---CCCCCCBCCGGGC
T ss_pred CccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEEEEEecCCCCEEEEEecCCC---CCCceecCCcCCC
Confidence 33444778888886 4555444 479999999999999999999754 67888887654
Q ss_pred CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccC--CCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCc
Q 017471 67 ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH--GSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDV 144 (371)
Q Consensus 67 ~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~--~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~ 144 (371)
..|+.|+++|||++... +++.|+|+...+..... ......++++|+++++|+|||||+|.+|+||||++... .
T Consensus 135 ~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPLv~~~G~vVGI~s~~~----~ 209 (231)
T 3tjo_A 135 RPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYIQTDAIINYGNAGGPLVNLDGEVIGINTLKV----T 209 (231)
T ss_dssp CTTCEEEEEEEEETTEE-EEEEEEEEECC-------------CCEEESSCCCTTTTTSEEECTTSCEEEEEEEEE----E
T ss_pred CCCCEEEEEECCCCCCC-ceeeEEEeeccccccccccCCCcccEEEEcCCcCCCCchhHeecCCCeEEEEEeEEe----c
Confidence 56899999999998765 89999999887532211 11223579999999999999999999999999998765 3
Q ss_pred cceeccccCcchhHhHhhhhh
Q 017471 145 ENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 145 ~~~~~aiP~~~i~~~l~~L~~ 165 (371)
.+++||||++.++++++++++
T Consensus 210 ~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 210 AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCeEEEEEHHHHHHHHHHHhh
Confidence 579999999999999999864
No 15
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.86 E-value=4.3e-22 Score=167.51 Aligned_cols=124 Identities=25% Similarity=0.411 Sum_probs=109.7
Q ss_pred cceeccccCcchhHhHhhhhhCCeeecccccceeeeEcCC--HHHHHhccCCCC-CCceEEEEECCCCccccCCCCCCEE
Q 017471 145 ENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMEN--PDLRVAMSMKAD-QKGVRIRRVDPTAPESEVLKPSDII 221 (371)
Q Consensus 145 ~~~~~aiP~~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~--~~~~~~~gl~~~-~~gv~V~~V~~~spA~~GL~~GDvI 221 (371)
++++||||++.+++++++|.++|++. ++|||+.++++.+ ++.++.+|++.. ..|++|.+|.++|||+.||++||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGGTTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchHHCCCCCCEE
Confidence 57899999999999999999999998 9999999999843 378888999742 5799999999999998899999999
Q ss_pred EEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecccc
Q 017471 222 LSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 279 (371)
Q Consensus 222 l~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 279 (371)
++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++...+
T Consensus 81 ~~inG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 81 TKVDDKEIASSTDLQ----------SALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp EEETTEECCCHHHHH----------HHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred EEECCEEcCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 999999999988764 566666689999999999999999999987654
No 16
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.82 E-value=2e-19 Score=165.32 Aligned_cols=152 Identities=19% Similarity=0.284 Sum_probs=120.1
Q ss_pred eeeeccEEEEE-EEecCCCe----------------EeEEEEEecCCCCEEEEEEecCCCcCCccceecCC-CCCCCCeE
Q 017471 11 LNSRNEALILS-TWLLCSPS----------------APSATLVTADICIYTMLTVEDDEFWEGVLPVEFGE-LPALQDAV 72 (371)
Q Consensus 11 ~~~~gsg~vi~-~~~~~~~~----------------~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~-s~~lgd~V 72 (371)
..+.|+||+++ .++++++| ++++++..|+.+||||||++.. .+++++++. ....|+.|
T Consensus 56 ~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~~~~~~~~~v~~~~~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v 131 (237)
T 3k6y_A 56 KVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAGDKPFEATVVSYDPSVDVAILAVPHL----PPPPLVFAAEPAKTGADV 131 (237)
T ss_dssp EEEEEEEEEEETTEEEECGGGTTTCSEEEEEETTEEEECEEEEEETTTTEEEEECTTC----CSCCCCBCSSCCCTTCEE
T ss_pred cceeEEEEEEECCEEEECHHHcCCCceEEEEECCcEEEEEEEEEcCCCCEEEEEeCCC----CCCceecCCCCCCCCCEE
Confidence 35679999998 66666665 5789999999999999999954 678888863 23578999
Q ss_pred EEEEeCCCCCCceeeeeEEeeeeeee----ccCCC-eEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccce
Q 017471 73 TVVGYPIGGDTISVTSGVVSRIEILS----YVHGS-TELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENI 147 (371)
Q Consensus 73 ~~iG~p~g~~~~s~t~G~Vs~~~~~~----~~~~~-~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~ 147 (371)
+++|||.+... +.+.|.++...... +..+. ....++++|+.+++|+|||||+|.+|+||||+++... +..++
T Consensus 132 ~v~G~p~g~~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GdSGGPLv~~~G~vvGI~s~~~~--~~~~~ 208 (237)
T 3k6y_A 132 VVLGYPGGGNF-TATPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAI--DDAET 208 (237)
T ss_dssp EEEECGGGCSC-EEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEESCCCTTCTTCEEECTTSCEEEEEEEECS--SSTTE
T ss_pred EEEECCCCCCC-ccceeEEEeeEeecccccccCCCcccccEEEecCccCCCccHHHEECCCCEEEEEEEeecc--CCCcE
Confidence 99999988765 78888887664322 11222 4456799999999999999999999999999987653 34578
Q ss_pred eccccCcchhHhHhhhhhCCee
Q 017471 148 GYVIPTPVIMHFIQDYEKNGAY 169 (371)
Q Consensus 148 ~~aiP~~~i~~~l~~L~~~g~~ 169 (371)
+|+||++.++++++++.....+
T Consensus 209 ~~aip~~~v~~~l~~~~~~~~v 230 (237)
T 3k6y_A 209 GFVLTAGEVAGQLAKIGATQPV 230 (237)
T ss_dssp EEEEEHHHHHGGGGGTTCCSCC
T ss_pred EEEEEHHHHHHHHHHccCCCCC
Confidence 9999999999999999554443
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.70 E-value=6.5e-17 Score=140.15 Aligned_cols=107 Identities=17% Similarity=0.150 Sum_probs=77.4
Q ss_pred CCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeE
Q 017471 26 CSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTE 105 (371)
Q Consensus 26 ~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~ 105 (371)
+++.++|+++ .|+.+||||||++... .+++++++++++.. ++|+++|+|.+.. .++.+ .. ...+
T Consensus 50 dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~v~~~G~p~~~~--~~s~~-----~~--~~~g--- 113 (163)
T 2w5e_A 50 EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SCVTVMAYVNEDL--VVSTA-----AA--MVYG--- 113 (163)
T ss_dssp TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TEEEEEEEETTEE--EEEEE-----EE--EEET---
T ss_pred CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CEEEEEEeCCCCE--EEEEe-----cc--EEcC---
Confidence 5666899999 8999999999999763 24566778877654 8999999997621 11111 10 0011
Q ss_pred EeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 106 ~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
..++.++++++|||||||+|.+|+||||+++.. +..+ +|+|..
T Consensus 114 -~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~---g~~g-g~ai~~ 156 (163)
T 2w5e_A 114 -NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT---GYTG-GAVIID 156 (163)
T ss_dssp -TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE---TTEE-EEEECC
T ss_pred -CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc---cccc-CEEEec
Confidence 236788999999999999999999999998754 3344 666543
No 18
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.64 E-value=2.3e-15 Score=134.56 Aligned_cols=126 Identities=13% Similarity=0.075 Sum_probs=95.4
Q ss_pred CeEeEEEEEec-CCCCEEEEEEecCCCcCCccce-------ecC--CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeee
Q 017471 28 PSAPSATLVTA-DICIYTMLTVEDDEFWEGVLPV-------EFG--ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 97 (371)
Q Consensus 28 ~~~~A~vv~~d-~~~DlAlLkv~~~~~~~~l~~~-------~l~--~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~ 97 (371)
..+.|+++..| +..|+|+||++.... ..+.+ ++. ..+.+|++|..+|+|.+ .++|+|+.+++.
T Consensus 48 ~~~~g~vv~~~~~~~D~Avi~i~~~~~--~~~~v~~~g~~~~v~g~~~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~ 120 (198)
T 2h5c_A 48 GAVVGTFAARVFPGNDRAWVSLTSAQT--LLPRVANGSSFVTVRGSTEAAVGAAVCRSGRTTG-----YQCGTITAKNVT 120 (198)
T ss_dssp TEEEEEEEEEECSBSCEEEEEECTTSE--EEEEEEETTEEEECCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEE
T ss_pred CcEEEEEEecCCCCCCEEEEEeCCCCc--cCceEecCCceEEecCcccCCCCCeEEEeecCcc-----eEEEEEEeeeeE
Confidence 46789999999 999999999987531 12222 233 23568999999999875 789999999875
Q ss_pred eccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeec-ccC-------CccceeccccCcchhHhH
Q 017471 98 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSL-KHE-------DVENIGYVIPTPVIMHFI 160 (371)
Q Consensus 98 ~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~-~~~-------~~~~~~~aiP~~~i~~~l 160 (371)
..........++|+|+.+++|+|||||+|.+|++|||+++.. ... ...+.+|++|++.+++.+
T Consensus 121 ~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 121 ANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp EEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred EEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCCCccccccCCceEEEEEHHHHHHHC
Confidence 433333344579999999999999999999999999998863 221 234689999998776554
No 19
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.58 E-value=2e-15 Score=122.66 Aligned_cols=97 Identities=24% Similarity=0.343 Sum_probs=80.3
Q ss_pred CeeecccccceeeeEcCCHHHHHhccCC-----CCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCcccccc
Q 017471 167 GAYTGFPLLGVEWQKMENPDLRVAMSMK-----ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 240 (371)
Q Consensus 167 g~~~g~~~lGi~~~~~~~~~~~~~~gl~-----~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~ 240 (371)
|++. ++|||+.++++ +++.++.++++ ....|++|.+|.++|||++ ||++||+|++|||+++.+..++.
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVY---- 74 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHH----
Confidence 4566 89999999999 89999999873 2357999999999999999 99999999999999999877653
Q ss_pred ccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEeccc
Q 017471 241 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 278 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 278 (371)
..+.. |+++.++|.|+|+.+++++++...
T Consensus 75 ------~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 75 ------EAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp ------HHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred ------HHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 44443 688999999999999888887653
No 20
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.56 E-value=2.2e-15 Score=122.25 Aligned_cols=98 Identities=19% Similarity=0.348 Sum_probs=83.2
Q ss_pred CeeecccccceeeeEcCCHHHHHhccCCC-----CCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCcccccc
Q 017471 167 GAYTGFPLLGVEWQKMENPDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 240 (371)
Q Consensus 167 g~~~g~~~lGi~~~~~~~~~~~~~~gl~~-----~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~ 240 (371)
|++. ++|+|+.++++ +++.++.++++. ...|++|.+|.++|||++ ||++||+|++|||+++.++.++.
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~---- 74 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQ---- 74 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----
Confidence 4556 89999999999 899999988742 357999999999999999 99999999999999999887754
Q ss_pred ccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecccc
Q 017471 241 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 279 (371)
Q Consensus 241 ~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 279 (371)
..+ .+|+++.++|.|+|+.+++++++...+
T Consensus 75 ------~~l---~~g~~v~l~v~R~g~~~~~~v~~~~~~ 104 (112)
T 2p3w_A 75 ------EAV---LTESPLLLEVRRGNDDLLFSIAPEVVM 104 (112)
T ss_dssp ------HHH---HHCSSEEEEEEETTEEEEEEECCEEEC
T ss_pred ------HHH---hCCCeEEEEEEECCEEEEEEEEEeeeC
Confidence 444 257889999999999988888876543
No 21
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.55 E-value=2.5e-14 Score=128.74 Aligned_cols=128 Identities=26% Similarity=0.379 Sum_probs=98.5
Q ss_pred CCeEeE-EEEEecCCCCEEEEEEecCC---------CcCCccceecCCCCCCCCeEEEEEeCCCCCC---ceeeeeEEee
Q 017471 27 SPSAPS-ATLVTADICIYTMLTVEDDE---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSR 93 (371)
Q Consensus 27 ~~~~~A-~vv~~d~~~DlAlLkv~~~~---------~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~---~s~t~G~Vs~ 93 (371)
+..+.+ +++..|+..||||||++... |.+.++++.+.+....|+.++++|+|.+... ..++.|+|++
T Consensus 62 g~~~~~~~v~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~ 141 (210)
T 2as9_A 62 GGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKR 141 (210)
T ss_dssp SCEEEEEEEEECSSSSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEE
T ss_pred CCEEEEEEEEeCCCCCcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcc
Confidence 334566 48888899999999998731 1124567777655567899999999986443 2357788887
Q ss_pred eeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 94 IEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 94 ~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
... ..+++|+.+.+|+|||||+|.+|+||||++......+.+..+|++|.+.+++++++..
T Consensus 142 ~~~----------~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~ 202 (210)
T 2as9_A 142 IKD----------NILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHI 202 (210)
T ss_dssp EET----------TEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTC
T ss_pred ccC----------CeEEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhh
Confidence 531 2578899999999999999999999999988765545567789999999999998864
No 22
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.43 E-value=1.6e-12 Score=115.10 Aligned_cols=122 Identities=8% Similarity=-0.016 Sum_probs=91.1
Q ss_pred EeEEEEEec-CCCCEEEEEEecCCCcCCccc---------eecCC--CCCCCCeEEEEEeCCCCCCceeeeeEEeeeeee
Q 017471 30 APSATLVTA-DICIYTMLTVEDDEFWEGVLP---------VEFGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 97 (371)
Q Consensus 30 ~~A~vv~~d-~~~DlAlLkv~~~~~~~~l~~---------~~l~~--s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~ 97 (371)
+.|++++.| +..|+|+||++.... ..+. ++++. .+.+|++|..+|+|.+ .++|+|+.+++.
T Consensus 48 ~~g~v~~~~~p~~DiAlikl~~~~~--~~~~v~~~g~~~~~~l~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~ 120 (188)
T 2oua_A 48 GRGVFERSVFPGNDAAFVRGTSNFT--LTNLVSRYNSGGYATVSGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQT 120 (188)
T ss_dssp EEEEEEEEECSBSCEEEEEEEESCE--EEEEEECGGGCSEEECCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEE
T ss_pred ceEEEEeeCCCCCCEEEEEeCCCCc--cccceeecCCcceEeccCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeE
Confidence 679999999 999999999997631 1121 23443 3467899999999975 688999999875
Q ss_pred eccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHh
Q 017471 98 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHF 159 (371)
Q Consensus 98 ~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~ 159 (371)
..........+++++..+++|+|||||++ +|+++||++.........+.+|++|++.+++.
T Consensus 121 v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 121 VSYPQGTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGSGNCRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEEEEEEEESHHHHHH
T ss_pred EEeCCCcEeeeEeeeeecCCCCccceEEE-CCEEEEEEeccCCCCCCCCceEEEEHHHHHHH
Confidence 43222233457899999999999999995 78999999875422234567999998776644
No 23
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.42 E-value=2.6e-13 Score=122.18 Aligned_cols=120 Identities=14% Similarity=0.145 Sum_probs=91.9
Q ss_pred CCCceEEEEECCCCcccc-CCCCC-CEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEE
Q 017471 196 DQKGVRIRRVDPTAPESE-VLKPS-DIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 273 (371)
Q Consensus 196 ~~~gv~V~~V~~~spA~~-GL~~G-DvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v 273 (371)
...|++|.+|.++|||++ ||++| |+|++|||++|.++.++. ..+....+|++++++|+|+++..+.++
T Consensus 14 ~~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~~~~~v 83 (209)
T 3rle_A 14 GTEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTL----------KDLLKANVEKPVKMLIYSSKTLELRET 83 (209)
T ss_dssp SSEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHH----------HHHHHHTTTSCEEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHH----------HHHHhcCCCCEEEEEEEecCCceEEEE
Confidence 457999999999999999 99999 999999999999999865 456666789999999999875555566
Q ss_pred EeccccccCCCCCCCCCCCceeeccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHhhhh-hhhH
Q 017471 274 TLATHRRLIPSHNKGRPPSYYIIAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQM-SSLL 342 (371)
Q Consensus 274 ~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~-~~~~ 342 (371)
++.+... ....+ ++|+.+.++ +... ...|++|..+.++|||+..-.+. +|+|
T Consensus 84 ~l~p~~~------~~~~~----~lGi~~~~~~~~~~-------~~~Gv~V~~V~~~spA~~aGl~~~GD~I 137 (209)
T 3rle_A 84 SVTPSNL------WGGQG----LLGVSIRFCSFDGA-------NENVWHVLEVESNSPAALAGLRPHSDYI 137 (209)
T ss_dssp EECCCSS------SSSSS----SSCEEEEEEECTTG-------GGSCEEEEEECTTSHHHHHTCCTTTEEE
T ss_pred EEccccc------ccccC----ccceEEeecChhHc-------cccceEEEEeCCCChHHHCCCCCCCCEE
Confidence 6543211 01111 589988765 2222 12789999999999999887777 7775
No 24
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.41 E-value=2.7e-12 Score=113.48 Aligned_cols=121 Identities=17% Similarity=0.167 Sum_probs=87.3
Q ss_pred eEEEEEec-CCCCEEEEEEecCCCcCCccceec--------C--CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeec
Q 017471 31 PSATLVTA-DICIYTMLTVEDDEFWEGVLPVEF--------G--ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSY 99 (371)
Q Consensus 31 ~A~vv~~d-~~~DlAlLkv~~~~~~~~l~~~~l--------~--~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~ 99 (371)
.+++...+ +..|+||||++.+.. ..+.+.+ . ..+.+|+.|.++|+|.+ .+.|+|+++++...
T Consensus 50 ~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~~i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~ 122 (187)
T 1hpg_A 50 VGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQDISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVN 122 (187)
T ss_dssp EEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEEECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEE
T ss_pred EEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCceeeeccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEE
Confidence 37777677 789999999987421 1123332 2 34568999999999964 68899999987543
Q ss_pred cCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHh
Q 017471 100 VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHF 159 (371)
Q Consensus 100 ~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~ 159 (371)
........++++|+.+++|+|||||++. ++++||++.....-.....+|++|++.+++.
T Consensus 123 ~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~~~~~~~~~~~~~i~~~~~~ 181 (187)
T 1hpg_A 123 YGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSGCSGTAGSAIHQPVTEALSA 181 (187)
T ss_dssp ETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESCCBTTBCCCEEEEHHHHHHH
T ss_pred eCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCCCCCCCCceEEEEHHHHHHH
Confidence 2223344579999999999999999987 5999999875421123467889988766544
No 25
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.41 E-value=7.2e-13 Score=105.19 Aligned_cols=75 Identities=21% Similarity=0.326 Sum_probs=66.3
Q ss_pred CCCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 196 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 196 ~~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
...|++|.+|.++|||++||++||+|++|||++|.++.++. ..+....+|++++++|.|+|+..++++++
T Consensus 5 ~~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 74 (100)
T 3i18_A 5 TYDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFI----------DYIHSKKVGDTVKINYKHGDKNEQADIKL 74 (100)
T ss_dssp CCCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHH----------HHHHTSCTTCEEEEEEEETTEEEEEEEEC
T ss_pred eCCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 35799999999999998899999999999999999998865 66766678999999999999999999998
Q ss_pred ccccc
Q 017471 276 ATHRR 280 (371)
Q Consensus 276 ~~~~~ 280 (371)
...++
T Consensus 75 ~~~~~ 79 (100)
T 3i18_A 75 TAIDK 79 (100)
T ss_dssp EECST
T ss_pred ecCCC
Confidence 76543
No 26
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.39 E-value=4.8e-13 Score=107.20 Aligned_cols=100 Identities=14% Similarity=0.187 Sum_probs=81.0
Q ss_pred cchhHhHhhhhhCCeeecccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC
Q 017471 154 PVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND 232 (371)
Q Consensus 154 ~~i~~~l~~L~~~g~~~g~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~ 232 (371)
+.+.++.+++.++++.. ++++|+..... + ....|+.|..+.|.|||++ ||++||+|++|||++|.++
T Consensus 5 ~~~~~~~~~l~~~~~~~-~~~~g~~~~~~-~----------~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~ 72 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEI-FQYVRLSQVKR-D----------DKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP 72 (105)
T ss_dssp HHHHHHHHHHHHSGGGH-HHHEEEEEEEE-T----------TEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTST
T ss_pred HHHHHHHHHHHHCHHHH-HhhceeEEEec-C----------CcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCH
Confidence 45677888888888888 88999876533 1 0124777888888888899 9999999999999999999
Q ss_pred CCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 233 GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 233 ~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
.++. ..+....+|++++++|.|+|+.+++++++
T Consensus 73 ~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 73 NVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp THHH----------HHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred HHHH----------HHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 9865 56666678999999999999998887764
No 27
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.39 E-value=1.6e-13 Score=115.67 Aligned_cols=102 Identities=18% Similarity=0.186 Sum_probs=71.0
Q ss_pred hhCCeeecccccceeeeEcCCHHH-HHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccc
Q 017471 164 EKNGAYTGFPLLGVEWQKMENPDL-RVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRH 239 (371)
Q Consensus 164 ~~~g~~~g~~~lGi~~~~~~~~~~-~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~ 239 (371)
.+.++.. ++++|+.+....+.+. .+.+++.+...|++|.+|.++|||++ ||++||+|++|||++|.+ ..++.
T Consensus 30 ~~~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~--- 105 (139)
T 2vz5_A 30 HKLRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQAR--- 105 (139)
T ss_dssp ECEEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH---
T ss_pred EEcCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHH---
Confidence 3445555 7899999875322221 23455544567999999999999999 999999999999999985 34432
Q ss_pred cccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 017471 240 GERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277 (371)
Q Consensus 240 ~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 277 (371)
..+.. .+|++++++|.|+|+..++++++..
T Consensus 106 -------~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 106 -------KRLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp -------HHHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred -------HHHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 44444 6889999999999999888777654
No 28
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.38 E-value=2.4e-12 Score=114.08 Aligned_cols=122 Identities=13% Similarity=0.112 Sum_probs=88.0
Q ss_pred EEEEEec-CCCCEEEEEEecCCCcC-Ccc-----ceecCC--CCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCC
Q 017471 32 SATLVTA-DICIYTMLTVEDDEFWE-GVL-----PVEFGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG 102 (371)
Q Consensus 32 A~vv~~d-~~~DlAlLkv~~~~~~~-~l~-----~~~l~~--s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~ 102 (371)
|++++.| +..|+||||++...... .+. ++++.. .+.+|+.|..+|+|.+ .++|+|+.+++......
T Consensus 45 g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~~~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~ 119 (189)
T 2ea3_A 45 GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTAAPVGSAVCRSGSTTG-----WHCGTITALNSSVTYPE 119 (189)
T ss_dssp EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETT
T ss_pred cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcCCCCCCEEEEEEeCCc-----cEEEEEEecceEEEeCC
Confidence 8999999 99999999998763110 111 234544 3467899999999965 68899998887533222
Q ss_pred CeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHh
Q 017471 103 STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHF 159 (371)
Q Consensus 103 ~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~ 159 (371)
.....+++++..+++|+|||||++ +|+++||++.....-...+.+|++|++.+++.
T Consensus 120 ~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~~~~~~~~pi~~~l~~ 175 (189)
T 2ea3_A 120 GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRTGGTTFFQPVNPILQA 175 (189)
T ss_dssp EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEEEEEEEEHHHHHHH
T ss_pred ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCCCCcEEEEEHHHHHHH
Confidence 223357899999999999999997 79999999865421123468899997665543
No 29
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.35 E-value=3.1e-12 Score=110.73 Aligned_cols=115 Identities=16% Similarity=0.190 Sum_probs=87.6
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCC-ccccccccchhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGT-VPFRHGERIGFSYLV 249 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~-l~~~~~~~~~~~~~~ 249 (371)
++|+|+.++.. ..|++|.+|.++|||++ ||++||+|++|||+++.++.+ +. ..+
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~ 70 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKA----------HKV 70 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 68999999875 26899999999999999 999999999999999999886 43 345
Q ss_pred hccCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCC
Q 017471 250 SQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSS 329 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~S 329 (371)
.+..+|++++++|.|+++.++++++... . . .+|+.+. .+ ++..+.++|
T Consensus 71 ~~~~~~~~v~l~vr~~~~~~~v~l~~~~---------~--~-----~lG~~~~---------------~g-~v~~v~~~s 118 (166)
T 1w9e_A 71 LKQAFGEKITMTIRDRPFERTITMHKDS---------T--G-----HVGFIFK---------------NG-KITSIVKDS 118 (166)
T ss_dssp HHHCCSSEEEEEEECCTTCEEEEEECCT---------T--S-----CCSEEEE---------------TT-EEEEECTTS
T ss_pred HhcCCCCEEEEEEEcCCCcEEEEEecCC---------C--C-----cEeEEEe---------------CC-EEEEEccCC
Confidence 5556788999999544477777765310 0 0 2576542 23 788899999
Q ss_pred hHhHHhhhhhhhH
Q 017471 330 CIQCHNCQMSSLL 342 (371)
Q Consensus 330 p~~~~~~~~~~~~ 342 (371)
||+-.-...+|.|
T Consensus 119 ~a~~aGl~~GD~I 131 (166)
T 1w9e_A 119 SAARNGLLTEHNI 131 (166)
T ss_dssp HHHHTTCCSSEEE
T ss_pred HHHHcCCCCCCEE
Confidence 9987766666654
No 30
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.33 E-value=8.1e-13 Score=103.75 Aligned_cols=74 Identities=28% Similarity=0.409 Sum_probs=65.0
Q ss_pred CCCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 196 DQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 196 ~~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
...|++|.+|.++|||++||++||+|++|||+++.++.++. ..+....+|++++++|.|+|+.+++++++
T Consensus 3 ~~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 72 (94)
T 2kl1_A 3 EAKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIV----------SYVREKQAGDRVRVTFIRDRKQHEAELVL 72 (94)
T ss_dssp CCCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHH----------HHHHHSCTTCCEEEEEEETTEEEEEEECC
T ss_pred CCCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHH----------HHHHhCCCCCEEEEEEEECCEEEEEEEEE
Confidence 35789999999999998899999999999999999887754 66666668999999999999999999888
Q ss_pred cccc
Q 017471 276 ATHR 279 (371)
Q Consensus 276 ~~~~ 279 (371)
...+
T Consensus 73 ~~~~ 76 (94)
T 2kl1_A 73 KPFP 76 (94)
T ss_dssp CBCS
T ss_pred eeCC
Confidence 7654
No 31
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.33 E-value=1.7e-13 Score=107.02 Aligned_cols=72 Identities=24% Similarity=0.328 Sum_probs=63.4
Q ss_pred CceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 017471 198 KGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 277 (371)
.|++|.+|.++|||++||++||+|++|||++|.++.++. ..+....+|++++++|.|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLI----------DYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHH----------HHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHH----------HHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 378899999999998899999999999999999887764 5666666899999999999999999999876
Q ss_pred cc
Q 017471 278 HR 279 (371)
Q Consensus 278 ~~ 279 (371)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 32
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.32 E-value=5.3e-12 Score=112.25 Aligned_cols=122 Identities=26% Similarity=0.388 Sum_probs=82.5
Q ss_pred EEEEEecCCCCEEEEEEecCC---------CcCCccceecCCCCCCCCeEEEEEeCCCCCC---ceeeeeEEeeeeeeec
Q 017471 32 SATLVTADICIYTMLTVEDDE---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSY 99 (371)
Q Consensus 32 A~vv~~d~~~DlAlLkv~~~~---------~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~---~s~t~G~Vs~~~~~~~ 99 (371)
++++..++.+||||||++... |.+.++++.+.+....|+.+.++|+|.+... ...+.|.++....
T Consensus 67 ~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~--- 143 (204)
T 2vid_A 67 KKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG--- 143 (204)
T ss_dssp EEEEECSSSSCCEEEEECSEEEEEETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET---
T ss_pred eEEecCCCCCeEEEEEEcCcccccccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC---
Confidence 577777788999999998531 1112467777665567899999999986442 2355677766431
Q ss_pred cCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccc-cCcchhHhHhhh
Q 017471 100 VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQDY 163 (371)
Q Consensus 100 ~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~ai-P~~~i~~~l~~L 163 (371)
..++.++...+|+|||||+|.+|+++||++......+....+|++ +...+.+++++.
T Consensus 144 -------~~~~~~~~~~~GdSGGPl~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 144 -------SSIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp -------TEEEECCCCCGGGTTCEEECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred -------CeEEEecccCCCCccCcEECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 246788899999999999999999999998765211122334433 335566666553
No 33
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.31 E-value=7.9e-12 Score=111.09 Aligned_cols=124 Identities=24% Similarity=0.405 Sum_probs=85.5
Q ss_pred CeEeE-EEEEecCCCCEEEEEEecCC-----CcCCccceecCCCCCCCCeEEEEEeCCCCCC---ceeeeeEEeeeeeee
Q 017471 28 PSAPS-ATLVTADICIYTMLTVEDDE-----FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILS 98 (371)
Q Consensus 28 ~~~~A-~vv~~d~~~DlAlLkv~~~~-----~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~---~s~t~G~Vs~~~~~~ 98 (371)
..+.+ +++..|+.+||||||++.+. |.+.++++.+.+....|+.++++|+|.+... ..++.|+++....
T Consensus 63 ~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~-- 140 (200)
T 2w7s_A 63 GNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG-- 140 (200)
T ss_dssp CEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEET--
T ss_pred cEEEEEEEecCCCcceEEEEEECCCCCCcccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCC--
Confidence 33555 57788889999999999752 2234677777655567899999999976322 2357788876431
Q ss_pred ccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccc-cCcchhHhHhh
Q 017471 99 YVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQD 162 (371)
Q Consensus 99 ~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~ai-P~~~i~~~l~~ 162 (371)
.++++++.+.+|+|||||+|.+|+++||++..... +....++++ +.+.+.+++++
T Consensus 141 --------~~~~~~~~~~~GdSGGPl~~~~g~lvGI~s~g~~~-~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 141 --------TFMEFDAYAQPGNSGSPVLNSKHELIGILYAGSGK-DESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp --------TEEEECSCCCTTCTTCEEECTTSCEEEEEEEEC-----CCCEEEEECCHHHHHHHHH
T ss_pred --------CEEEEcceeCCCCccCeEECcCCEEEEEEeccccC-CCCccceeeecHHHHHHHHHh
Confidence 24788999999999999999899999999876532 112334444 33455555554
No 34
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.29 E-value=1.5e-11 Score=108.64 Aligned_cols=121 Identities=13% Similarity=0.096 Sum_probs=88.0
Q ss_pred eEEEEEec-CCCCEEEEEEecCCCcCCccc--------eecCC--CCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeec
Q 017471 31 PSATLVTA-DICIYTMLTVEDDEFWEGVLP--------VEFGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSY 99 (371)
Q Consensus 31 ~A~vv~~d-~~~DlAlLkv~~~~~~~~l~~--------~~l~~--s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~ 99 (371)
.|++++.| +..|+|+||++.+.. ..+. +++.. .+.+|++|..+|++.+ .++|+|+++++...
T Consensus 47 ~g~v~~~~~~~~D~Alikl~~~~~--~~~~v~~~~g~~~~i~~~~~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~ 119 (186)
T 2pfe_A 47 SGTVAGSYFPGRDMGWVRITSADT--VTPLVNRYNGGTVTVTGSQEAATGSSVCRSGATTG-----WRCGTIQSKNQTVR 119 (186)
T ss_dssp TEEEEEEECSBSCEEEEEECTTSE--EEEEEECSSSCEEECCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEE
T ss_pred eEEEEecCCCCCCEEEEEeCCCcc--cccceeccCCceEecCCCCCCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEE
Confidence 49999998 999999999987531 1222 23433 3467899999999865 78899999987632
Q ss_pred cCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHh
Q 017471 100 VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHF 159 (371)
Q Consensus 100 ~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~ 159 (371)
........+++++..+++|+|||||++ +|+++||++.....-...+.+|++|++.+.+.
T Consensus 120 ~~~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c~~~~~~~~~pi~~~l~~ 178 (186)
T 2pfe_A 120 YAEGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDCRSGGITFFQPINPLLSY 178 (186)
T ss_dssp ETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTTEEEEEEEEHHHHHHH
T ss_pred eCCceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCCCCCCCcEEEEEHHHHHHH
Confidence 222333357889999999999999996 78999999875421133467899997665544
No 35
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.27 E-value=3e-11 Score=110.70 Aligned_cols=126 Identities=18% Similarity=0.296 Sum_probs=89.4
Q ss_pred eEeEEEEEecC---CCCEEEEEEecCC----CcCCccceecCCC--CCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeec
Q 017471 29 SAPSATLVTAD---ICIYTMLTVEDDE----FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSY 99 (371)
Q Consensus 29 ~~~A~vv~~d~---~~DlAlLkv~~~~----~~~~l~~~~l~~s--~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~ 99 (371)
.+.++++..|+ .+||||||++.+. +.+.++++.+.++ ...|+.++++|+|.+..........+.-.. +
T Consensus 104 ~~~~~~i~~~~~~~~~DiAll~l~~~~~~~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~---~ 180 (242)
T 1agj_A 104 EYEVKEILQEPFGAGVDLALIRLKPDQNGVSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT---L 180 (242)
T ss_dssp CEEEEEEESCTTCTTSCCEEEEECCCTTSCCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC---G
T ss_pred ceeEEEEEeCCCCCCCcEEEEEEcCCCccccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec---C
Confidence 36778888888 8999999999763 1123678888754 356899999999987543222232222111 1
Q ss_pred cCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccC-CccceeccccCc-chhHhHhhh
Q 017471 100 VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTP-VIMHFIQDY 163 (371)
Q Consensus 100 ~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aiP~~-~i~~~l~~L 163 (371)
. ..+++++.+.+|+|||||+|.+|+||||++...... +..+.++++|++ .+.+++++.
T Consensus 181 ~------~~~~~~~~~c~GdSGGPl~~~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 181 S------RGLRYYGFTVPGNSGSGIFNSNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp G------GSEEEECCCCGGGTTCEEECTTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred C------ceEEEeCCcCCCCCchHhcccCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 0 136788999999999999999999999998765422 345778889886 777777664
No 36
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.26 E-value=2.4e-12 Score=99.40 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=59.2
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
.|+.|..+.|+|||++ ||++||+|++|||++|.++.++. +.+....+|++++++|.|+|+..++++++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~----------~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMN----------TLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHH----------HHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 4888888988889999 99999999999999999998864 56666667899999999999998887764
No 37
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.20 E-value=2.6e-12 Score=104.72 Aligned_cols=91 Identities=14% Similarity=0.207 Sum_probs=71.0
Q ss_pred hhCCeeeccccc----ceeeeEcCCHHHHHhccCCC---CCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCc
Q 017471 164 EKNGAYTGFPLL----GVEWQKMENPDLRVAMSMKA---DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTV 235 (371)
Q Consensus 164 ~~~g~~~g~~~l----Gi~~~~~~~~~~~~~~gl~~---~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l 235 (371)
.++|++. ++|+ |+.+... +. .+|+.- ...|++|.+|.++|||++ ||++||+|++|||++|.++.++
T Consensus 7 ~~~g~v~-r~~l~~~~~v~l~~~-~~----~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~ 80 (117)
T 1uit_A 7 GGERRKD-RPYVEEPRHVKVQKG-SE----PLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQ 80 (117)
T ss_dssp CCCCCSC-CCCSCCCEEEEEECS-SC----CCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHH
T ss_pred cccCccc-cccCCCCEEEEEEeC-CC----CccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 4577887 8999 8888765 22 233321 236899999999999999 9999999999999999998775
Q ss_pred cccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 236 PFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
. .......+|++++++|.|+++..+
T Consensus 81 ~----------~~~~~~~~g~~v~l~v~r~~~~~~ 105 (117)
T 1uit_A 81 Q----------ARLIIGQQCDTITILAQYNPHVHQ 105 (117)
T ss_dssp H----------HHHHTTSCCSEEEEEECCCSCCCC
T ss_pred H----------HHHHHHcCCCeEEEEEEECCchhh
Confidence 4 333345679999999999987653
No 38
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.19 E-value=5.9e-11 Score=104.63 Aligned_cols=117 Identities=15% Similarity=0.129 Sum_probs=85.9
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC--EEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFN 272 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g--~~~~~~ 272 (371)
..|++|.+|.|+|||++ | |++||+|++|||+++.++.+.. .......+|+++++++.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA----------AVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 46899999999999999 9 9999999999999999987654 23333457899999999988 455556
Q ss_pred EEeccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 273 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 273 v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
+++...+. -.|+.+.... .........++++..+.++|||+..- ...+|.|
T Consensus 104 v~l~~~~~---------------~lG~~~~~~~----~~~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~I 155 (196)
T 3gsl_A 104 IKLIKGPK---------------GLGFSIAGGV----GNQHIPGDNSIYVTKIIEGGAAHKDGRLQIGDKI 155 (196)
T ss_dssp EEEEEBTT---------------BSCEEEEESB----TSCSBTTBCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred EEEecCCC---------------CceEEEEccC----CCcCCCCCCCEEEEEECCCChHHhcCCCCCCCEE
Confidence 66544321 1577654320 00111224689999999999999887 7777765
No 39
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.18 E-value=8.1e-12 Score=96.79 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=58.1
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEe--cCCCCccccccccchhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V--~~~~~l~~~~~~~~~~~~~ 248 (371)
.+++|+.+... ..|++|.+|.++|||++ ||++||+|++|||+++ .++.++. ..
T Consensus 16 ~~~lG~~~~~~--------------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~ 71 (90)
T 2eaq_A 16 SLDFGFTIKWD--------------IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWE----------EA 71 (90)
T ss_dssp SSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHH----------HH
T ss_pred CCcccEEEEec--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHH----------HH
Confidence 35688877633 35899999999999999 9999999999999999 6666643 55
Q ss_pred hhccCCCCEEEEEEEECCE
Q 017471 249 VSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~ 267 (371)
+....+|+++.++|.|+|+
T Consensus 72 l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 72 MAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp HHHHHHHTEEEEEEEEEC-
T ss_pred HHhcCCCCEEEEEEEeCCC
Confidence 5544578999999999874
No 40
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.14 E-value=8.1e-10 Score=97.02 Aligned_cols=125 Identities=15% Similarity=0.160 Sum_probs=85.8
Q ss_pred eEEEEEec-CCCCEEEEEEec-CC-CcCCccceecCC--CCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCC-e
Q 017471 31 PSATLVTA-DICIYTMLTVED-DE-FWEGVLPVEFGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGS-T 104 (371)
Q Consensus 31 ~A~vv~~d-~~~DlAlLkv~~-~~-~~~~l~~~~l~~--s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~-~ 104 (371)
.+++...+ +.+|+||||++. +. +.+.++++.+.. .+..|+.+.+.|++.+ .+.|+++.+......... .
T Consensus 51 ~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~ 125 (185)
T 2qa9_E 51 LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAANATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDV 125 (185)
T ss_dssp EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCE
T ss_pred eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcccCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCE
Confidence 46777778 889999999997 32 222345666653 3467899999999753 467788777654221111 1
Q ss_pred EEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHh
Q 017471 105 ELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQ 161 (371)
Q Consensus 105 ~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~ 161 (371)
....++++..+.+|+|||||++.+ +++||++...........+++.|++.+.++++
T Consensus 126 ~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~~~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 126 VYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNCSSGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETTTEEEEEEEEHHHHHHHHT
T ss_pred EeceEEecccCCCCCccceEEECC-EEEEEEEecCCCCCCCCcEEEEEHHHHHHhhC
Confidence 223578888889999999999875 99999987542222345678888877666653
No 41
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.13 E-value=6.9e-10 Score=103.75 Aligned_cols=120 Identities=22% Similarity=0.331 Sum_probs=84.6
Q ss_pred eEEEEEecCCCCEEEEEEecCC----CcCCccceecCCCC--CCCCeEEEEEeCCCCCC--ceeeeeEEeeeeeeeccCC
Q 017471 31 PSATLVTADICIYTMLTVEDDE----FWEGVLPVEFGELP--ALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHG 102 (371)
Q Consensus 31 ~A~vv~~d~~~DlAlLkv~~~~----~~~~l~~~~l~~s~--~lgd~V~~iG~p~g~~~--~s~t~G~Vs~~~~~~~~~~ 102 (371)
.++++..+..+||||||++... |...++++.|.++. ..|+.++++|||.+... ...+.|.++....
T Consensus 82 ~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~------ 155 (274)
T 2o8l_A 82 AEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG------ 155 (274)
T ss_dssp EEEEEECSSSSCCEEEEECCCTTSCCTTTSSCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET------
T ss_pred EEEEEeCCCCCcEEEEEecCcccccccccccccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC------
Confidence 4567777778999999999752 34467888887643 46899999999976432 2345666665431
Q ss_pred CeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 103 STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 103 ~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
..++.++.+.+|+|||||++.+|+||||++...... .+.++.+. ..+..++++.
T Consensus 156 ----~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~~--~~~~~~~~-~~~~~wI~~~ 209 (274)
T 2o8l_A 156 ----EAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPNE--FNGAVFIN-ENVRNFLKQN 209 (274)
T ss_dssp ----TEEEESCCCCTTCTTCEEECTTSCEEEEEEEEETTT--EEEEEECC-HHHHHHHHHH
T ss_pred ----CeEEeCcccCCCCchhheeccCCeEEEEEeCcccCC--CCceEEec-HHHHHHHHHH
Confidence 246788999999999999998999999998765321 23444453 4455666554
No 42
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.13 E-value=5.6e-11 Score=93.26 Aligned_cols=82 Identities=18% Similarity=0.322 Sum_probs=62.4
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
.+++|+.+..-.... .......|++|.+|.++|||++ ||++||+|++|||++|.+..++. ....
T Consensus 13 ~~glG~~i~~g~~~~-----~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~ 77 (97)
T 2w4f_A 13 TGGLGISIAGGKGST-----PYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 77 (97)
T ss_dssp TTBSSEEEEECTTSC-----CSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCceeEEEECCccCC-----cccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 567999987541100 0111357999999999999999 99999999999999999987753 2223
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
...+|++++++|.|+|+.
T Consensus 78 ~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 78 LRGAGTAVQMRVWRERET 95 (97)
T ss_dssp HHTSCSEEEEEEECCSSC
T ss_pred HhCCCCeEEEEEEeCCcc
Confidence 334899999999999874
No 43
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.13 E-value=4.9e-11 Score=93.69 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=59.4
Q ss_pred eEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC--EEEEEEEEec
Q 017471 200 VRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFNITLA 276 (371)
Q Consensus 200 v~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g--~~~~~~v~l~ 276 (371)
.+|.+|.++|||++ ||++||+|++|||++|.++.++. ..+.....+++++++|.|+| +.+++++++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~----------~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVR----------LQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHH----------HHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 46889999999999 99999999999999999998865 56666556689999999998 5678888887
Q ss_pred ccc
Q 017471 277 THR 279 (371)
Q Consensus 277 ~~~ 279 (371)
..+
T Consensus 74 ~~~ 76 (95)
T 3id1_A 74 HWA 76 (95)
T ss_dssp TCC
T ss_pred ccc
Confidence 653
No 44
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.13 E-value=1.3e-11 Score=95.86 Aligned_cols=78 Identities=10% Similarity=0.218 Sum_probs=53.0
Q ss_pred CHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEE
Q 017471 184 NPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAA 259 (371)
Q Consensus 184 ~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~ 259 (371)
+++.++.+|++.. .|++|.+|.++|||++ | |++||+|++|||+++. ++.++. ..+.. .++++.
T Consensus 10 ~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~ 76 (92)
T 3cyy_A 10 KSAKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAK----------TLIER--SKGKLK 76 (92)
T ss_dssp CSSTTSCCCEEEE-EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHT--TTTEEE
T ss_pred eCCCCCCCCEEEe-CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCcEE
Confidence 4445555666422 6899999999999999 9 9999999999999999 655543 44443 345899
Q ss_pred EEEEECCEEEEEEEE
Q 017471 260 VKVLRDSKILNFNIT 274 (371)
Q Consensus 260 l~v~R~g~~~~~~v~ 274 (371)
++|.|+|+..+++++
T Consensus 77 l~v~r~g~~~~~~v~ 91 (92)
T 3cyy_A 77 MVVQRDERATLLNVP 91 (92)
T ss_dssp EEEEC----------
T ss_pred EEEEeCCceeeeeCC
Confidence 999999988776654
No 45
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1e-10 Score=94.03 Aligned_cols=83 Identities=19% Similarity=0.300 Sum_probs=62.7
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
+..+|+.+..-.+. ..+.....|++|.+|.++|||++ ||++||+|++|||++|.+..+.. ....
T Consensus 25 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS-----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCeeeEEEEccccC-----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 56799998754111 01112357999999999999999 99999999999999999876643 2222
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 017471 251 QKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~~ 269 (371)
...+|++++|+|.|+|+.+
T Consensus 90 ~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp HHSCCSEEEEEEEECSSCC
T ss_pred hhCCCCeEEEEEEECCccC
Confidence 2348999999999998754
No 46
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=92.32 Aligned_cols=75 Identities=15% Similarity=0.123 Sum_probs=60.2
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
.+++|+.+....+ ...|++|.+|.++|||++ ||++||+|++|||++|.+.. +. .++.
T Consensus 21 ~~~lG~~~~~~~~-----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~----------~~~~ 78 (100)
T 2eeh_A 21 AGRLGFSVRGGSE-----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MG----------SAVK 78 (100)
T ss_dssp SSSCSEEEECCTT-----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HH----------HHHH
T ss_pred CCCccEEEEcccc-----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HH----------HHHH
Confidence 5689999986511 136899999999999999 99999999999999999875 32 3344
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
..+.|++++++|.|+|+.
T Consensus 79 ~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHHSCSSEEEEEEECSCC
T ss_pred hhcCCCEEEEEEEECCcC
Confidence 334589999999999864
No 47
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.10 E-value=1.3e-10 Score=92.37 Aligned_cols=83 Identities=20% Similarity=0.234 Sum_probs=61.6
Q ss_pred ccccceeeeEcCCHHHHH-hccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhh
Q 017471 172 FPLLGVEWQKMENPDLRV-AMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSY 247 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~-~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~ 247 (371)
++++|+.+..-.+.+.+. .++......|++|.+|.++|||++ ||++||+|++|||+++.+.. ++. .
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~ 87 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQAR----------K 87 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 457999998332322221 233333567999999999999999 99999999999999998766 432 3
Q ss_pred hhhccCCCCEEEEEEEEC
Q 017471 248 LVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 248 ~~~~~~~g~~v~l~v~R~ 265 (371)
.+. ..+|+++.++|.|+
T Consensus 88 ~l~-~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 88 RLT-KRSEEVVRLLVTRQ 104 (104)
T ss_dssp HHT-CTTCSEEEEEEEEC
T ss_pred HHH-hCCCCEEEEEEEcC
Confidence 343 36789999999984
No 48
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.09 E-value=3.7e-11 Score=93.19 Aligned_cols=67 Identities=24% Similarity=0.328 Sum_probs=58.1
Q ss_pred eEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 017471 200 VRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 277 (371)
Q Consensus 200 v~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 277 (371)
++|.+|.++|||++ ||++||+|++|||+++.++.++. ..+.. .+|+++.++|.|+|+.+++++++..
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~~-~~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFV----------MLVRD-NPGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHH----------HHHHH-CTTCCEEEEEEETTEEEEEEECCEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHH----------HHHhc-CCCCeEEEEEEECCeEEEEEEEEee
Confidence 67889999999999 99999999999999999988764 55555 4789999999999999888887654
No 49
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.08 E-value=1.6e-10 Score=106.20 Aligned_cols=110 Identities=19% Similarity=0.211 Sum_probs=77.3
Q ss_pred eEeEEEEEecC---CCCEEEEEEecCC----CcCCccceecCCC--CCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeec
Q 017471 29 SAPSATLVTAD---ICIYTMLTVEDDE----FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSY 99 (371)
Q Consensus 29 ~~~A~vv~~d~---~~DlAlLkv~~~~----~~~~l~~~~l~~s--~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~ 99 (371)
.+.++.+..|+ .+||||||++.+. +...++++.+.++ ...|+.++++|+|.+..........+.-
T Consensus 98 ~~~~~~i~~hp~~~~~DiALLkl~~~~~~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~------ 171 (246)
T 1qtf_A 98 KFEAEEIKESPYGQGLDLAIIKLKPNEKGESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEM------ 171 (246)
T ss_dssp CEEEEEEESCTTCTTSCCEEEEECCCTTSCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEE------
T ss_pred eEEEEEEEeCCCCCCCCEEEEEEeCCccccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeee------
Confidence 56788888898 8999999999763 1123678888754 3568999999999875531111111110
Q ss_pred cCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchh
Q 017471 100 VHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIM 157 (371)
Q Consensus 100 ~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~ 157 (371)
.. .++.++.+.+|+|||||+|.+|+||||++... .++++|++.+.
T Consensus 172 ~~------~~~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~-------~~~~ipi~~~~ 216 (246)
T 1qtf_A 172 FN------DSQYFGYTEVGNSGSGIFNLKGELIGIHSGKG-------GQHNLPIGVFF 216 (246)
T ss_dssp SS------SSBEESCCCGGGTTCEEECTTCCEEEEEEEEE-------TTTTEEEEEET
T ss_pred cC------cEEEeCCCCCCCchhheECCCCEEEEEEeccc-------cCccccchhhh
Confidence 00 13456788999999999999999999998754 15788876544
No 50
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.08 E-value=6.8e-11 Score=93.89 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=56.3
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 247 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~ 247 (371)
++++|+.+... ++...+.++++ ...|++|.+|.++|||++ | |++||+|++|||++|.+ ..++. .
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~-~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~ 82 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV----------E 82 (103)
T ss_dssp -CCCCEEEECC-CC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCceeEEEEcc-CCCCcccccCC-CCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 57899999887 54444445554 347999999999999999 9 99999999999999988 44443 4
Q ss_pred hhhccCCCCEEEEEEEECCE
Q 017471 248 LVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 248 ~~~~~~~g~~v~l~v~R~g~ 267 (371)
.+... +++++++|.|.++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 44433 4589999999764
No 51
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.07 E-value=6.7e-11 Score=91.81 Aligned_cols=74 Identities=19% Similarity=0.192 Sum_probs=59.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+..-.+ ...|++|.+|.++|||++ ||++||+|++|||+++.++. ++. ..+
T Consensus 13 ~~~G~~l~~~~~-----------~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l 71 (91)
T 2pkt_A 13 GPWGFRLVGGKD-----------FEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQ----------NRI 71 (91)
T ss_dssp SCCSEEEEEEGG-----------GTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHH
T ss_pred CCCCEEEEccCC-----------CCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 457888764310 135899999999999999 99999999999999999988 542 444
Q ss_pred hccCCCCEEEEEEEECCEEE
Q 017471 250 SQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~ 269 (371)
.. +|++++++|.|+|+.+
T Consensus 72 ~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 72 KG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp HT--CSSEEEEEEEEECCCC
T ss_pred Hc--CCCeEEEEEEECCccc
Confidence 43 8999999999998764
No 52
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.06 E-value=1.5e-10 Score=93.44 Aligned_cols=84 Identities=14% Similarity=0.148 Sum_probs=66.9
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CC-CCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+..-. +..|++|.+|.++|||++ || ++||+|++|||+++.+ ..++. +.
T Consensus 13 ~glG~~~~~~~------------~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~----------~~ 70 (112)
T 1qau_A 13 GGLGFLVKERV------------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSAL----------EV 70 (112)
T ss_dssp TBTSEEEEECS------------SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHH----------HH
T ss_pred CceeEEEEecC------------CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 45888877541 235899999999999999 98 9999999999999998 55543 44
Q ss_pred hhccCCCCEEEEEEEECCEEEEEEEEecccc
Q 017471 249 VSQKYTGDSAAVKVLRDSKILNFNITLATHR 279 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~ 279 (371)
+.. .+|+++.+++.|+|+..++++++...+
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~~ 100 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTFTG 100 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEECT
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeeccC
Confidence 544 578999999999999888887765443
No 53
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.06 E-value=3.5e-11 Score=90.94 Aligned_cols=77 Identities=10% Similarity=0.208 Sum_probs=58.5
Q ss_pred ceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEec--CCCCccccccccchhhhhhhc
Q 017471 176 GVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 176 Gi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~ 251 (371)
|+++..+ +++..+.+|+... .|++|.+|.++|||++ | |++||+|++|||+++. ++.++. ..+..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAK----------TLIER 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEEE-EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHH----------HHHHT
T ss_pred CeEEEEE-ECCCCCCCCEEEe-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHC
Confidence 5566666 6666677777532 6899999999999999 9 9999999999999999 555543 44443
Q ss_pred cCCCCEEEEEEEECC
Q 017471 252 KYTGDSAAVKVLRDS 266 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g 266 (371)
.++++.++|.|+|
T Consensus 69 --~~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 --SKGKLKMVVQRDE 81 (81)
T ss_dssp --STTEEEEEEEC--
T ss_pred --CCCeEEEEEEeCC
Confidence 3458999999975
No 54
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.05 E-value=4.2e-10 Score=100.35 Aligned_cols=111 Identities=15% Similarity=0.084 Sum_probs=78.7
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhhhccCCCCE-EEEEEEECCEEEEEE
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDS-AAVKVLRDSKILNFN 272 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~~~~~g~~-v~l~v~R~g~~~~~~ 272 (371)
.|++|.+|.++|||++ | ||+||+|++|||+++.+ ..... . ..+. ...++. +.++|.|+++.....
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~--------~-~~~~-~~~~~~~v~l~v~R~~~~~~~~ 114 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLK--------V-HQLF-HTTYEKAVTLTVFRADPPELEK 114 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHH--------H-HHHH-HSCCSSEEEEEEECCSSCCEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHH--------H-HHHH-HhcCCCceEEEEEecccCCCcE
Confidence 5899999999999999 8 99999999999999998 43322 1 1122 234555 999999998765444
Q ss_pred EEeccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 273 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 273 v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
+++...... .. .+|+.+.. ...++++..+.++|||+..- ...+|.|
T Consensus 115 ~~v~l~~~~-------~~-----~lG~~~~~------------~~~gv~V~~V~~gs~A~~aG~L~~GD~I 161 (206)
T 3r0h_A 115 FNVDLMKKA-------GK-----ELGLSLSP------------NEIGCTIADLIQGQYPEIDSKLQRGDII 161 (206)
T ss_dssp EEEEEECCT-------TC-----CCCEEEEE------------CSSCEEEEEECTTSCHHHHHHCCTTCEE
T ss_pred EEEEEecCC-------CC-----ccCeEEEc------------CCceEEEEEECCCChHHHcCCCCCCCEE
Confidence 443322110 00 26776532 22679999999999999886 7777776
No 55
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.04 E-value=1e-10 Score=103.85 Aligned_cols=114 Identities=13% Similarity=0.150 Sum_probs=83.7
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhhhccCCCCEEEEEEEECCEEE---
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL--- 269 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~--- 269 (371)
..+++|.+|.++|||++ | |++||+|++|||+++.+ +.++. ..+....+|++++++|.|+++..
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN----------QLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHH----------HHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 35799999999999999 9 99999999999999984 45543 56666666999999999999642
Q ss_pred ---EEEEEeccccccCCCCCCCCCCCceeeccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 270 ---NFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 270 ---~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
..++++... . . ..+|+.+..+ .. ....++++..+.++|||+..- ...+|.|
T Consensus 105 ~~~~~~v~l~~~---------~-~----~~lG~~~~~~~~~--------~~~~gv~V~~V~~~s~A~~aG~l~~GD~I 160 (196)
T 1p1d_A 105 SSGTFHVKLPKK---------H-S----VELGITISSPSSR--------KPGDPLVISDIKKGSVAHRTGTLELGDKL 160 (196)
T ss_dssp CSSCEEEEECCC---------S-S----CCCCCEEECSCSS--------STTCCCEEEECCSSSHHHHTSCCCTTCEE
T ss_pred CCCcEEEEecCC---------C-C----CCcCEEEECCCCC--------CCCCCEEEEEECCCCcHHhcCCCCCCCEE
Confidence 123333210 0 0 1368877654 21 123689999999999999876 7777766
No 56
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.04 E-value=3.8e-10 Score=101.36 Aligned_cols=85 Identities=18% Similarity=0.201 Sum_probs=67.3
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCC-CCEEEEECCEEecCCCCccccccccchhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKP-SDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~-GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~ 249 (371)
+.++|+.+..+ +++.++ ..|++|.+|.++|||++ ||++ ||+|++|||+ +.++.++. +.+
T Consensus 94 ~~~lGi~~~~~-~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~----------~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLF----------SLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHH----------HHH
T ss_pred cCccceEEeec-ChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHH----------HHH
Confidence 57899999887 433221 26999999999999999 9999 9999999998 99999975 566
Q ss_pred hccCCCCEEEEEEEECCEEEEEEEEec
Q 017471 250 SQKYTGDSAAVKVLRDSKILNFNITLA 276 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~~~~v~l~ 276 (371)
... +|++++++|+|++...+.++++.
T Consensus 155 ~~~-~g~~v~l~v~r~~~~~~~~v~l~ 180 (209)
T 3rle_A 155 ETH-EAKPLKLYVYNTDTDNCREVIIT 180 (209)
T ss_dssp HHT-TTSCEEEEEEETTTTEEEEEEEC
T ss_pred HhC-CCCeEEEEEEECCceEEEEEEEE
Confidence 655 89999999999864333444444
No 57
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.03 E-value=4.5e-10 Score=87.58 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=50.6
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
.|++|.+|.++|||++ ||++||+|++|||+++.+..+. ..+...++|++++|+|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-----------EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-----------HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-----------HHHHhhcCCCEEEEEEEECCC
Confidence 5899999999999999 9999999999999999987653 244444579999999999864
No 58
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=4.1e-11 Score=98.75 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=64.5
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~ 249 (371)
..++|+.+... ++. ....|++|.+|.++|||++ | |++||+|++|||++|.++.++. ..+
T Consensus 31 ~~~lG~~~~~~-~~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~l 91 (124)
T 1wh1_A 31 QDKLGLTVCYR-TDD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAV----------ALL 91 (124)
T ss_dssp TCCCCEEEECC-CCC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHH----------HHH
T ss_pred CCcccEEEEec-CCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHH----------HHH
Confidence 34699999877 222 1246999999999999999 9 9999999999999999877754 555
Q ss_pred hccCCCCEEEEEEEECCEEEEE
Q 017471 250 SQKYTGDSAAVKVLRDSKILNF 271 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~~~ 271 (371)
.. .+|+++.|+|.|+|+.++.
T Consensus 92 ~~-~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 92 TS-EENKNFSLLIARPELQLDE 112 (124)
T ss_dssp TC-SSCCSCCEEEEECSSCCCC
T ss_pred Hh-CCCCEEEEEEEECCEEeec
Confidence 54 5789999999999976443
No 59
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=99.01 E-value=2.8e-10 Score=93.69 Aligned_cols=82 Identities=20% Similarity=0.216 Sum_probs=59.0
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 247 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~ 247 (371)
++++|+.+... ++...+..+++ ...|++|.+|.++|||++ | |++||+|++|||++|.+ ..++. .
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~ 102 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAV----------E 102 (123)
T ss_dssp TSCCSEEEEEC-C---------C-CCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCCccEEEEec-cCccccccccC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 57899999887 55444444443 356999999999999999 9 99999999999999988 44432 4
Q ss_pred hhhccCCCCEEEEEEEECCE
Q 017471 248 LVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 248 ~~~~~~~g~~v~l~v~R~g~ 267 (371)
.+... +++++++|.|..+
T Consensus 103 ~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHC--CSSEEEEEECCCC
T ss_pred HHHcC--CCeEEEEEEECCc
Confidence 44432 5589999998764
No 60
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.00 E-value=9.6e-10 Score=113.40 Aligned_cols=72 Identities=15% Similarity=0.342 Sum_probs=63.7
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
..|++|.+|.++|||++ ||++||+|++|||++| +..++. +.+...++|++++++|.|+|+.+++++++
T Consensus 495 ~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~----------~~l~~~~~g~~v~l~v~R~g~~~~~~v~l 563 (597)
T 4fgm_A 495 PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVK----------RILERYIPGDTVTIHAFRRDELMTLELTW 563 (597)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHH----------HHHTTCCTTCEEEEEEEETTEEEEEEEEC
T ss_pred CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHH----------HHHHhcCCCCEEEEEEEECCEEEEEEEEe
Confidence 45899999999999999 9999999999999999 577754 67776678999999999999999999998
Q ss_pred cccc
Q 017471 276 ATHR 279 (371)
Q Consensus 276 ~~~~ 279 (371)
...+
T Consensus 564 ~~~~ 567 (597)
T 4fgm_A 564 QEPA 567 (597)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 7654
No 61
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.00 E-value=9.2e-11 Score=91.04 Aligned_cols=61 Identities=18% Similarity=0.261 Sum_probs=46.3
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 269 (371)
..|++|.+|.++|||++ ||++||+|++|||+++. +..++. ..+... |++++++|.|+++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVV----------DRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHH----------HHHTTS--CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcC--CCEEEEEEEeCCccc
Confidence 46899999999999999 99999999999999998 555543 444433 899999999998754
No 62
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.00 E-value=1e-10 Score=91.68 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=59.1
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+.... +.+ ...|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+
T Consensus 14 ~~~G~~l~~~~--------~~~-~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l 74 (96)
T 2v90_A 14 QGFGFLLREEK--------GLD-GRPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETV----------SRI 74 (96)
T ss_dssp TBSCEEEEEEE--------CTT-SCEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHH
T ss_pred CcccEEEEecc--------CCC-CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 35788877541 222 346899999999999999 9999999999999999984 3332 344
Q ss_pred hccCCCCEEEEEEEECCEEEE
Q 017471 250 SQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~~ 270 (371)
.. .|++++++|.|+|+..+
T Consensus 75 ~~--~g~~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 75 QG--QGSCVSLTVVDPEADRE 93 (96)
T ss_dssp HT--TTTEEEEEEECCCTTSC
T ss_pred Hc--CCCEEEEEEECCCCccc
Confidence 43 38999999999986543
No 63
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.99 E-value=8.1e-10 Score=85.03 Aligned_cols=71 Identities=18% Similarity=0.320 Sum_probs=53.8
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCccccCCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+... ....|++|..+ ++|||+.||++||+|++|||+++.++ .++. ..+..
T Consensus 15 g~G~~~~~~------------~~~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~~ 71 (88)
T 3bpu_A 15 GFGFTIADS------------PGGGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQVV----------DMLVE 71 (88)
T ss_dssp BSSCEEEEC------------TTSSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHHHH----------HHHHT
T ss_pred ceeEEEEec------------CCCCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHHHH----------HHHHh
Confidence 478887644 12358888887 99999889999999999999999987 4432 44444
Q ss_pred cCCCCEEEEEEEECCE
Q 017471 252 KYTGDSAAVKVLRDSK 267 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~ 267 (371)
..+|++++++|.|+|+
T Consensus 72 ~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 72 SPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SCTTCEEEEEEEEECC
T ss_pred CCCCCEEEEEEEeCCc
Confidence 5679999999999875
No 64
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.99 E-value=5.7e-10 Score=87.17 Aligned_cols=73 Identities=19% Similarity=0.301 Sum_probs=56.6
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+.... ...|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+
T Consensus 17 ~lG~~~~~~~------------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~-- 74 (95)
T 2vwr_A 17 QLGIKLVRRT------------DEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL--------AAQII-- 74 (95)
T ss_dssp CCCEEEEECS------------SSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH--
T ss_pred cccEEEEecc------------CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--
Confidence 4788876541 236899999999999999 9 9999999999999998865432 11122
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
..+|++++++|.|+++.
T Consensus 75 ~~~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 75 QASGERVNLTIARPGKP 91 (95)
T ss_dssp HHCCSEEEEEEEEESCS
T ss_pred HcCCCEEEEEEEcCCcC
Confidence 23689999999998753
No 65
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.98 E-value=3.9e-10 Score=92.91 Aligned_cols=61 Identities=16% Similarity=0.287 Sum_probs=53.3
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.++ .++. ..+....+|++++++|.|+++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHH----------HHHHHSCTTCEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhcCCCCEEEEEEEECCch
Confidence 6899999999999999 9999999999999999998 5543 5566667899999999998764
No 66
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.98 E-value=6.4e-10 Score=85.99 Aligned_cols=70 Identities=23% Similarity=0.347 Sum_probs=56.1
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~ 250 (371)
.+|+.+.... ...|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+.
T Consensus 16 g~G~~~~~~~------------~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~ 73 (90)
T 2he4_A 16 GYGFNLHSDK------------SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVV----------ASIK 73 (90)
T ss_dssp BCCEEEEECS------------SSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHH----------HHHT
T ss_pred CccEEEEccC------------CCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHHH
Confidence 4777776541 246899999999999999 9999999999999999988 4432 4444
Q ss_pred ccCCCCEEEEEEEECCE
Q 017471 251 QKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~ 267 (371)
. .|+++.+++.|.+.
T Consensus 74 ~--~~~~v~l~v~r~~~ 88 (90)
T 2he4_A 74 A--REDEARLLVVGPST 88 (90)
T ss_dssp T--SSSEEEEEEECCCC
T ss_pred c--CCCcEEEEEEccCC
Confidence 3 38899999999865
No 67
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.96 E-value=1.7e-09 Score=96.12 Aligned_cols=115 Identities=15% Similarity=0.116 Sum_probs=81.7
Q ss_pred CCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE------
Q 017471 197 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI------ 268 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~------ 268 (371)
..+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+ ..+|++++++|.|+++.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~~~~~~~g~ 101 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDE--------IISLL--KNVGERVVLEVEYELPPVSIQGS 101 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHH--------HHHHH--HTCCSEEEEEEEEECCCCCCCCS
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCeEEEEEeccCCCcccCCC
Confidence 46799999999999986 89999999999999999983321 11223 34688999999998742
Q ss_pred ----EEEEEEeccccccCCCCCCCCCCCceeeccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 269 ----LNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 269 ----~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
.++++++.... . .+|+.+... .. ......++++..+.++|||+..- ...+|.|
T Consensus 102 ~~~~~~~~v~l~~~~----------~-----~lG~~l~~g~~~------~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I 160 (200)
T 2qt5_A 102 SVMFRTVEVTLHKEG----------N-----TFGFVIRGGAHD------DRNKSRPVVITCVRPGGPADREGTIKPGDRL 160 (200)
T ss_dssp SEEEEEEEEEEECBT----------T-----BCSEEEEEECCS------STTTCEEEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred ccceeEEEEEEecCC----------C-----CeEEEEECCCCC------CccCCCCEEEEEECCCChHHHcCCCCCCCEE
Confidence 56666664211 1 257765432 10 01123689999999999999876 7777765
No 68
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=98.96 E-value=4e-09 Score=92.26 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=78.1
Q ss_pred ecCCCCEEEEEEecCCC-cCCccce-----ecC--CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCe-EEe
Q 017471 37 TADICIYTMLTVEDDEF-WEGVLPV-----EFG--ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGST-ELL 107 (371)
Q Consensus 37 ~d~~~DlAlLkv~~~~~-~~~l~~~-----~l~--~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~-~~~ 107 (371)
..+..|+||||++.+.. ...+.++ .+. ..+..|+.|.++|++.+ .+.|.++.+++........ ...
T Consensus 50 ~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~ 124 (181)
T 2sga_A 50 SFPNNDYGIIRHSNPAAADGRVYLYNGSYQDITTAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYG 124 (181)
T ss_dssp ECSBSCEEEEEESCGGGCCCEEECSSSCEEECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEE
T ss_pred cCCCCCEEEEEccCCCcccceEEecCCcceeecccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEee
Confidence 34778999999987421 1122221 222 34567899999998753 5678888776542111111 234
Q ss_pred EEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhH
Q 017471 108 GLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160 (371)
Q Consensus 108 ~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l 160 (371)
.++++..+.+|+|||||++.+ +++||++...........+++.|++.+.+.+
T Consensus 125 ~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 125 MIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSGNCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp EEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETTTEEEEEEEEHHHHHHHH
T ss_pred eEecccccCCCCCCCEEEECC-EEEEEEEeeCCCCcCCCceEEEEHHHHHHhc
Confidence 578888899999999999976 9999998764222234568888877655443
No 69
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.95 E-value=1.9e-09 Score=88.99 Aligned_cols=67 Identities=25% Similarity=0.405 Sum_probs=56.9
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEec
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 276 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~ 276 (371)
..|++|.+|.++|||++.|++||+|++|||++|.++.++. ..+....+|++++++| |+|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~----------~~l~~~~~g~~v~l~V-R~g~---~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYS----------AALKTISVGEVINITT-DQGT---FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHH----------HHHTTCCTTCEEEEEE-TTEE---EEEECC
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHH----------HHHHhcCCCCEEEEEE-ECCE---EEEEEe
Confidence 4699999999999998779999999999999999998864 5666567899999999 9997 566665
Q ss_pred c
Q 017471 277 T 277 (371)
Q Consensus 277 ~ 277 (371)
.
T Consensus 90 ~ 90 (125)
T 2hga_A 90 R 90 (125)
T ss_dssp B
T ss_pred c
Confidence 4
No 70
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=4.8e-10 Score=88.68 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=59.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
..+|+.+.... +...|++|.+|.++|||++ ||++||+|++|||++|.++.+. ..+..
T Consensus 21 ~~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~ 78 (101)
T 1uez_A 21 EGLGFSIRGGS-----------EHGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-----------EAVKA 78 (101)
T ss_dssp TCSSEEEEECT-----------TTTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-----------HHHHH
T ss_pred CcccEEEeCCC-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-----------HHHHh
Confidence 45888887651 1236899999999999999 9999999999999999998763 34554
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
.+.++++.++|.|+|+.
T Consensus 79 ~~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 79 LKGSKKLVLSVYSAGRI 95 (101)
T ss_dssp SSSSSSCCEEECCCCCC
T ss_pred hcCCCeEEEEEEECCcc
Confidence 56678899999998863
No 71
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.95 E-value=1.3e-09 Score=87.05 Aligned_cols=80 Identities=14% Similarity=0.198 Sum_probs=60.1
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccC
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY 253 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~ 253 (371)
-+|+.+..-.+. -.++....|++|.+|.++|||+.||++||+|++|||+++.++.++. .......
T Consensus 20 glG~~i~~~~~~-----~~~~~~~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~----------~~~~~~~ 84 (107)
T 2h2b_A 20 GFGIAISGGRDN-----PHFQSGETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAF----------AVQQLRK 84 (107)
T ss_dssp BTCEEEEECTTS-----CCTTTCCCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHH----------HHHHHHT
T ss_pred ccCEEEecCcCC-----CcccCCCCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHH----------HHHHhhC
Confidence 478877643110 0111234699999999999998899999999999999999987754 3333446
Q ss_pred CCCEEEEEEEECCEE
Q 017471 254 TGDSAAVKVLRDSKI 268 (371)
Q Consensus 254 ~g~~v~l~v~R~g~~ 268 (371)
+|++++++|.|+|+.
T Consensus 85 ~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 85 SGKNAKITIRRKKGG 99 (107)
T ss_dssp CCSEEEEEEEEESCC
T ss_pred CCCEEEEEEEECCCC
Confidence 799999999998864
No 72
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=3.5e-10 Score=93.51 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=59.5
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEec
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 276 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~ 276 (371)
.|++|.+|.++|||++ ||++||+|++|||+++.+..+ . .++...+.++++.++|.|+|+..++++++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~----------~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-D----------EAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-H----------HHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-H----------HHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 4899999999999999 999999999999999998765 2 345445567899999999999888877776
Q ss_pred cc
Q 017471 277 TH 278 (371)
Q Consensus 277 ~~ 278 (371)
+.
T Consensus 115 ~~ 116 (128)
T 1uf1_A 115 ET 116 (128)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 73
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=98.94 E-value=7.6e-09 Score=96.35 Aligned_cols=122 Identities=20% Similarity=0.313 Sum_probs=84.9
Q ss_pred EeEEEEEecCCCCEEEEEEecCC----CcCCccceecCCCC--CCCCeEEEEEeCCCCCC--ceeeeeEEeeeeeeeccC
Q 017471 30 APSATLVTADICIYTMLTVEDDE----FWEGVLPVEFGELP--ALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVH 101 (371)
Q Consensus 30 ~~A~vv~~d~~~DlAlLkv~~~~----~~~~l~~~~l~~s~--~lgd~V~~iG~p~g~~~--~s~t~G~Vs~~~~~~~~~ 101 (371)
..++++..+..+||||||++... |...+.++.|..+. ..|+.++++|+|.+... ...+.|+++....
T Consensus 81 ~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----- 155 (268)
T 1wcz_A 81 TAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKG----- 155 (268)
T ss_dssp EEEEEEECSSSSCCEEEEECCCTTSCCHHHHSCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET-----
T ss_pred EEEEEecCCCCCcEEEEEecCcccccccccccceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCC-----
Confidence 34667777778999999999763 22346778887543 46899999999976432 2345677765431
Q ss_pred CCeEEeEEEEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 102 GSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 102 ~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
..+++++.+.+|+|||||++.+|+||||++..... ..+.++.+. ..+..++++..
T Consensus 156 -----~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~~--~~~~~~~~~-~~~~~wI~~~i 210 (268)
T 1wcz_A 156 -----EAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVPN--EFNGAVFIN-ENVRNFLKQNI 210 (268)
T ss_dssp -----TEEEESBCCCTTCTTCEEECTTSCEEEEEEEEETT--TEEEEEECC-HHHHHHHHHHC
T ss_pred -----CeEEEecccCCCCccCeEEccCCEEEEEEeCCccC--CcceeEEcC-HHHHHHHHHHH
Confidence 24688899999999999999899999999876532 223455554 44566665543
No 74
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.94 E-value=2.2e-10 Score=90.15 Aligned_cols=72 Identities=22% Similarity=0.351 Sum_probs=57.0
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~ 250 (371)
.+|+.+..- ....|++|.+|.++|||++ ||++||+|++|||+++.+ ..++. ..+.
T Consensus 21 g~G~~~~~~------------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~ 78 (98)
T 2jxo_A 21 GYGFNLHSD------------KSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIR 78 (98)
T ss_dssp CCCEEEECC------------CSSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHH
T ss_pred cccEEEEec------------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH
Confidence 477777643 1245899999999999999 999999999999999998 55543 4555
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
.. +++.+.++|.|+|+.
T Consensus 79 ~~-~~~~~~l~v~R~g~~ 95 (98)
T 2jxo_A 79 AG-GDETKLLVVDRETDE 95 (98)
T ss_dssp TT-TTEEEEEECCHHHHH
T ss_pred hC-CCcEEEEEEECCchh
Confidence 44 788888999998753
No 75
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.94 E-value=2.4e-10 Score=89.30 Aligned_cols=74 Identities=16% Similarity=0.205 Sum_probs=57.6
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+..-.+ ...|++|.+|.++|||++ ||++||+|++|||+++.+. .++. +.+
T Consensus 16 ~~lG~~l~~g~~-----------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l 74 (94)
T 1vb7_A 16 APWGFRISGGRD-----------FHTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQ----------SKI 74 (94)
T ss_dssp SCCSBCCEEETT-----------TTEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHH
T ss_pred CCccEEEecccC-----------CCCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 457888765311 235899999999999999 9999999999999999987 4432 444
Q ss_pred hccCCCCEEEEEEEECCEEE
Q 017471 250 SQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~~ 269 (371)
... +++++++|.|+|+..
T Consensus 75 ~~~--~~~v~l~v~R~g~~~ 92 (94)
T 1vb7_A 75 RQS--ASPLRLQLDRSSGPS 92 (94)
T ss_dssp HTC--CSSEEEEEECCCCCC
T ss_pred HhC--CCcEEEEEEECCcCC
Confidence 433 388999999998753
No 76
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.94 E-value=1.9e-09 Score=83.37 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=54.2
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhcc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 252 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~ 252 (371)
.+|+.+..- ....|++|.+|.++|||++ ||++||+|++|||+++.++.+.. ....+ .
T Consensus 20 ~~G~~~~~~------------~~~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~ 77 (91)
T 1m5z_A 20 DFGFSVADG------------LLEKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL--------VVPLI--A 77 (91)
T ss_dssp SSSEEEEEC------------TTSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHH--H
T ss_pred CccEEEEec------------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHH--H
Confidence 468877643 1236899999999999999 99999999999999999876432 11122 2
Q ss_pred CCCCEEEEEEEEC
Q 017471 253 YTGDSAAVKVLRD 265 (371)
Q Consensus 253 ~~g~~v~l~v~R~ 265 (371)
..|++++++|.|+
T Consensus 78 ~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 78 ESGNKLDLVISRN 90 (91)
T ss_dssp TSTTEEEEEEEEC
T ss_pred cCCCEEEEEEEeC
Confidence 4688999999986
No 77
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.94 E-value=6.8e-10 Score=87.19 Aligned_cols=61 Identities=25% Similarity=0.340 Sum_probs=49.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. +|++++++|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQA--------VIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 45899999999999999 9 9999999999999999873321 1234433 78999999999875
No 78
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.93 E-value=1.4e-10 Score=94.83 Aligned_cols=62 Identities=18% Similarity=0.324 Sum_probs=53.3
Q ss_pred CCceEEEEECC--CCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 197 QKGVRIRRVDP--TAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 197 ~~gv~V~~V~~--~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
..|++|.+|.+ +|||++ ||++||+|++|||++|.++ .++. ..+... |+++.++|.|+|+..+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~----------~~l~~~--g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVE----------DAIKQT--SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHH----------HHHHCC--SSCEEEEEEECSSCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHH----------HHHHhC--CCEEEEEEEECCEEEe
Confidence 47999999999 999999 9999999999999999998 6654 455443 8899999999997643
No 79
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.93 E-value=2.2e-09 Score=86.32 Aligned_cols=78 Identities=17% Similarity=0.281 Sum_probs=59.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+....+. .....|++|.+|.++|||++ | |++||+|++|||+++.++ .++. ..
T Consensus 22 ~glG~~~~~~~~~--------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~ 83 (111)
T 2koj_A 22 EGLGFSITSRDVT--------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVV----------SL 83 (111)
T ss_dssp TBTCEEEEECSCS--------SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHH----------HH
T ss_pred CccCEEEEeccCC--------CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 4588888765211 11236899999999999999 9 999999999999999875 3332 44
Q ss_pred hhccCCCCEEEEEEEECCEE
Q 017471 249 VSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~ 268 (371)
+....+|++++++|.|+++.
T Consensus 84 l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 84 LRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HHHCCCSSEEEEEEEECCCC
T ss_pred HHhCCCCCeEEEEEEeCCCC
Confidence 55445689999999999864
No 80
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=87.08 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=53.5
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE-EEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK-ILNFNI 273 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~-~~~~~v 273 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...+++++++|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEE--------AVTAL--KNTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHH--HSCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--hCCCCeEEEEEEeCCCCCeEEEE
Confidence 45899999999999999 9 9999999999999998754322 11222 3467899999999885 344555
Q ss_pred Eec
Q 017471 274 TLA 276 (371)
Q Consensus 274 ~l~ 276 (371)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 81
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.91 E-value=2.7e-10 Score=94.06 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=65.6
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CC-CCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+.... +..+++|.+|.++|||++ || ++||+|++|||+++.+ ..++. +.
T Consensus 20 ~glG~~~~~~~------------~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~----------~~ 77 (127)
T 1b8q_A 20 GGLGFLVKERV------------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSAL----------EV 77 (127)
T ss_dssp SCCSCCEEECT------------TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHH----------HH
T ss_pred CcEeEEEEecC------------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 45888887541 235899999999999999 98 9999999999999998 55543 44
Q ss_pred hhccCCCCEEEEEEEECCEEEEEEEEecc
Q 017471 249 VSQKYTGDSAAVKVLRDSKILNFNITLAT 277 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~~~~v~l~~ 277 (371)
+.. .+|+++.+++.|+|+..++++++..
T Consensus 78 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~ 105 (127)
T 1b8q_A 78 LRG-IASETHVVLILRGPEGFTTHLETTF 105 (127)
T ss_dssp HHS-CCSSCEEEEEECCCCSEEECCCCCC
T ss_pred HHh-CCCCeEEEEEEeCCceEEEEEEEEe
Confidence 444 5789999999999998887776543
No 82
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.90 E-value=2.8e-10 Score=91.51 Aligned_cols=84 Identities=19% Similarity=0.195 Sum_probs=61.2
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..-.+ .+....|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+
T Consensus 20 glG~~l~~g~~--------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~-- 81 (110)
T 1um1_A 20 GLGMGLIDGMH--------THLGAPGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLR--------AVDLI-- 81 (110)
T ss_dssp CCCEEEEETTT--------STTCCSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHH--------HHHHH--
T ss_pred ccCEEEeCCcC--------CCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--
Confidence 47888765311 111246899999999999999 9 9999999999999998654432 11222
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEe
Q 017471 252 KYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
...+++++|+|.|+++..++++++
T Consensus 82 ~~~~~~v~l~v~R~~~~~~~~v~~ 105 (110)
T 1um1_A 82 RHGGKKMRFLVAKSDVETAKKIHS 105 (110)
T ss_dssp HTCCSEEEEEEECCCHHHHHHHSS
T ss_pred HcCCCeEEEEEEeCCcceeEEEEe
Confidence 335899999999999876555443
No 83
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.90 E-value=1.4e-09 Score=86.72 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=49.5
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 274 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 274 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+.+.++|.|+++...+.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEE--------AVTAL--KNTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HSCCSEEEEEEECCCC-------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCCCCCcccc
Confidence 35899999999999999 9 9999999999999998754322 01122 23589999999999988877766
Q ss_pred ec
Q 017471 275 LA 276 (371)
Q Consensus 275 l~ 276 (371)
+.
T Consensus 102 p~ 103 (105)
T 2awx_A 102 HH 103 (105)
T ss_dssp --
T ss_pred cc
Confidence 53
No 84
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.90 E-value=3.8e-10 Score=88.50 Aligned_cols=78 Identities=26% Similarity=0.368 Sum_probs=58.6
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+..-.+.. .....|++|.+|.++|||++ | |++||+|++|||+++.+ ..++. ..
T Consensus 14 ~~lG~~i~~~~~~~-------~~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~ 76 (97)
T 2jil_A 14 NTFGFVIRGGAHDD-------RNKSRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAM----------SI 76 (97)
T ss_dssp TBCSEEEEEECCSC-------C--CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHH----------HH
T ss_pred CccCEEEeCcccCC-------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 35788876431100 01246899999999999999 9 99999999999999998 44432 44
Q ss_pred hhccCCCCEEEEEEEECCEEE
Q 017471 249 VSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~ 269 (371)
+.. +|++++++|.|+++.+
T Consensus 77 l~~--~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 77 LKQ--CGQEAALLIEYDVSET 95 (97)
T ss_dssp HHH--SCSEEEEEEEEECCCC
T ss_pred HHc--CCCeEEEEEEeCCCcC
Confidence 444 7899999999988754
No 85
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.90 E-value=2.4e-09 Score=83.97 Aligned_cols=78 Identities=18% Similarity=0.169 Sum_probs=57.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-. +....|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+
T Consensus 15 ~~lG~~l~~~~----------~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~- 75 (98)
T 2opg_A 15 TGLGLSIVGGS----------DTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDE--------AINVL- 75 (98)
T ss_dssp TBTCEEEEECT----------TSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH-
T ss_pred CcccEEEecCC----------CCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-
Confidence 35788886441 11125899999999999999 9 9999999999999999865221 11222
Q ss_pred ccCCCCEEEEEEEECCEEEE
Q 017471 251 QKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~~~ 270 (371)
...+++++++|.|+++..+
T Consensus 76 -~~~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 76 -RQTPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp -HTCCSEEEEEEEECSSCCC
T ss_pred -HhCCCeEEEEEEcCCCCCc
Confidence 2345899999999987543
No 86
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.90 E-value=6.6e-11 Score=95.95 Aligned_cols=67 Identities=22% Similarity=0.322 Sum_probs=53.9
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 273 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v 273 (371)
..|++|.+|.++|||++ ||++||+|++|||++|.+. .++. ..+.. .|++++++|.|+++..++++
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVV----------ELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHH----------HHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCEEEEEEEECCcceehhh
Confidence 46899999999999999 9999999999999999885 3322 33433 48999999999987765544
Q ss_pred Ee
Q 017471 274 TL 275 (371)
Q Consensus 274 ~l 275 (371)
++
T Consensus 105 ~~ 106 (114)
T 2edz_A 105 NQ 106 (114)
T ss_dssp HT
T ss_pred cC
Confidence 43
No 87
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.89 E-value=2.7e-09 Score=87.38 Aligned_cols=76 Identities=16% Similarity=0.284 Sum_probs=57.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
.+|+.+...... .....|++|.+|.++|||++ | |++||+|++|||++|.++ .++ ...+
T Consensus 42 ~lG~~l~~~~~~--------~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~----------~~~l 103 (121)
T 2kom_A 42 GLGFSITSRDVT--------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEV----------VSLL 103 (121)
T ss_dssp CCCEEEECCCCS--------SSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHH----------HHHH
T ss_pred cEeEEEEeccCC--------cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHH----------HHHH
Confidence 478887754110 01236899999999999999 9 999999999999999885 332 2445
Q ss_pred hccCCCCEEEEEEEECCE
Q 017471 250 SQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~ 267 (371)
....+|++++++|.|+|+
T Consensus 104 ~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 104 RSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp HHCCSSCEEEEEEEECCC
T ss_pred hcCCCCCEEEEEEEeCCC
Confidence 444568999999999874
No 88
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.88 E-value=8.5e-10 Score=84.72 Aligned_cols=73 Identities=14% Similarity=0.187 Sum_probs=56.5
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYL 248 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~ 248 (371)
...+|+.+..-.+ ...|++|.+|.++|||++ ||++||+|++|||+++.+. .++. +.
T Consensus 11 ~~~lG~~l~~~~~-----------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~ 69 (87)
T 2pa1_A 11 PAPWGFRITGGRD-----------FHTPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQ----------SK 69 (87)
T ss_dssp SSCCSEEEEEEGG-----------GTEEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHH----------HH
T ss_pred CCccCEEEecccC-----------CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 3457888864310 135899999999999999 9999999999999999983 5443 44
Q ss_pred hhccCCCCEEEEEEEECCE
Q 017471 249 VSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~ 267 (371)
+... + +++.++|.|+|+
T Consensus 70 l~~~-~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 70 IRQS-P-SPLRLQLDRITS 86 (87)
T ss_dssp HHTC-C-SSEEEEEEECCC
T ss_pred HHcC-C-CeEEEEEEecCC
Confidence 5443 3 789999999985
No 89
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.88 E-value=1.3e-09 Score=83.72 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=55.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+..-. + ...+++|.+|.++|||++ ||++||+|++|||+++.++. ++. ..+
T Consensus 13 ~~~G~~l~~g~----------~-~~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~~ 71 (88)
T 2uzc_A 13 APWGFRLQGGK----------D-FNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQ----------NKI 71 (88)
T ss_dssp SCCCEEEEEEG----------G-GTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHH
T ss_pred CcccEEEECcC----------C-CCCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 34788876431 0 235899999999999999 99999999999999999884 321 233
Q ss_pred hccCCCCEEEEEEEECCE
Q 017471 250 SQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~ 267 (371)
. ..|++++++|.|+|+
T Consensus 72 ~--~~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 72 K--GCTGSLNMTLQRESD 87 (88)
T ss_dssp H--TCCSEEEEEEECCCC
T ss_pred H--hCCCeEEEEEEeCCC
Confidence 2 248999999999874
No 90
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.88 E-value=2e-10 Score=91.25 Aligned_cols=69 Identities=16% Similarity=0.161 Sum_probs=54.6
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEec
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 276 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~ 276 (371)
.+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+. ..|++++++|.|+++..++++++.
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~g~~~~~~v~p~ 98 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLE--------AQNKIK--ACTGSLNMTLQRASAAAKSEPVSS 98 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHH--------HHHHHH--HCSSEEEEEECCCSCCCCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCcCCCCCCCC
Confidence 4689999999999999 99999999999999999874332 112222 248899999999998877666543
No 91
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.87 E-value=5.7e-10 Score=88.65 Aligned_cols=75 Identities=19% Similarity=0.231 Sum_probs=58.6
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..++|+.+..-. +...+++|.+|.++|||++ ||++||+|++|||++|.+ +.++. +.
T Consensus 14 ~~~lG~~l~~g~-----------~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~ 72 (103)
T 1v5l_A 14 PAPWGFRLSGGI-----------DFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQ----------DR 72 (103)
T ss_dssp SSCCSBCCEEET-----------TTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHH----------HH
T ss_pred CCCcCEEEeccc-----------cCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 457888876441 0124799999999999999 999999999999999998 55543 44
Q ss_pred hhccCCCCEEEEEEEECCEEE
Q 017471 249 VSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~ 269 (371)
+... |++++++|.|+++.+
T Consensus 73 l~~~--g~~v~l~v~R~g~~~ 91 (103)
T 1v5l_A 73 IKAA--SYQLCLKIDRAETRL 91 (103)
T ss_dssp HTTC--CSEEECEECCCTTTT
T ss_pred HHhC--CCeEEEEEEECCeEc
Confidence 4433 899999999998753
No 92
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.86 E-value=2.8e-09 Score=82.64 Aligned_cols=73 Identities=22% Similarity=0.216 Sum_probs=55.0
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+.... +..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+
T Consensus 16 ~~lG~~~~~~~------------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~- 74 (92)
T 2qg1_A 16 KGLGLSIVGKR------------NDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEA--------VAALL- 74 (92)
T ss_dssp SCCSEEEECCS------------SSCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHH-
T ss_pred CcccEEEEecc------------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-
Confidence 34788776431 246899999999999999 9 9999999999999998764221 11222
Q ss_pred ccCCCCEEEEEEEECCE
Q 017471 251 QKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~ 267 (371)
..++++++++|.|.+.
T Consensus 75 -~~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 75 -KCSLGTVTLEVGRIST 90 (92)
T ss_dssp -HHCCSEEEEEEECCCC
T ss_pred -HcCCCeEEEEEEcccc
Confidence 2367899999999863
No 93
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=4.6e-09 Score=81.38 Aligned_cols=62 Identities=18% Similarity=0.202 Sum_probs=47.4
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 269 (371)
.+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+. ..+++++++|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIR--SCPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCCC
Confidence 5799999999999999 99999999999999999763221 112332 25678999999998754
No 94
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.85 E-value=1.6e-09 Score=82.65 Aligned_cols=60 Identities=13% Similarity=0.314 Sum_probs=47.6
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
.|++|.+|.++|||++ ||++||+|++|||+++.++.... +...+ ...+++++++|.|+++
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLE--------AQNKI--KSASYNLSLTLQKSKR 85 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHH--------HHHHH--TTCSSCEEEEEESCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH--------HHHHH--HcCCCeEEEEEEeCCC
Confidence 5899999999999999 99999999999999999874221 11222 2356779999999874
No 95
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.85 E-value=1.1e-09 Score=87.38 Aligned_cols=60 Identities=25% Similarity=0.386 Sum_probs=51.0
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--CccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
..|++|.+|.++|||++ ||++||+|++|||+++.++. ++. ..+. .+|++++++|.|+++.
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~--~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVV----------ELVR--KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHH----------HHHH--HTTTEEEEEEECHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCEEEEEEEECCee
Confidence 46899999999999999 99999999999999999887 432 3443 4688999999998764
No 96
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.85 E-value=5.2e-09 Score=83.38 Aligned_cols=78 Identities=18% Similarity=0.225 Sum_probs=57.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.. ......|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+
T Consensus 21 ~glG~~i~~~~~--------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~~- 83 (106)
T 3axa_A 21 NGMGLSIVAAKG--------AGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER--------AAELM- 83 (106)
T ss_dssp SSCSEEEEEEEC--------SSCSSEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHH-
T ss_pred CccCEEEEeecC--------CCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-
Confidence 457888764211 112346899999999999999 9 9999999999999998754422 11222
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
..+|+++.++|.|+++.
T Consensus 84 -~~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 84 -TRTSSVVTLEVAKQGAI 100 (106)
T ss_dssp -HTCCSEEEEEEECCCSS
T ss_pred -HcCCCeEEEEEEeCCcc
Confidence 24789999999998864
No 97
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.84 E-value=6.9e-10 Score=89.74 Aligned_cols=78 Identities=19% Similarity=0.273 Sum_probs=58.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.-+|+.+.... ....|++|.+|.++|||++ ||++||+|++|||+++.++.+.. +...+.
T Consensus 27 ~~lG~~l~~~~-----------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~- 86 (114)
T 1x5n_A 27 RGLGCSISSGP-----------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLK- 86 (114)
T ss_dssp CCCCEEEEECC-----------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHH-
T ss_pred CceeEEEeecC-----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh-
Confidence 34788887551 1246899999999999999 99999999999999999987532 112222
Q ss_pred cCCCCEEEEEEEEC-CEEEEEE
Q 017471 252 KYTGDSAAVKVLRD-SKILNFN 272 (371)
Q Consensus 252 ~~~g~~v~l~v~R~-g~~~~~~ 272 (371)
.++++.++|.|+ |+.+++.
T Consensus 87 --~~~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 87 --SSRSLTISIVAAAGRELFMT 106 (114)
T ss_dssp --HCSSEEEEECSSTTTHHHHS
T ss_pred --cCCeEEEEEEcCCCCceEEE
Confidence 235799999999 8654433
No 98
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.83 E-value=5.2e-09 Score=82.00 Aligned_cols=59 Identities=19% Similarity=0.122 Sum_probs=47.6
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|.+|.++|||++ | |++||+|++|||++|.+..+.. .......+++++.++|.|..
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------SYALFKGANGKVSMEVTRPK 91 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH----------HHHHHHTCSSEEEEEEECCC
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhcCCCcEEEEEEeCC
Confidence 5899999999999999 9 9999999999999998755432 12222346778999999963
No 99
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.82 E-value=2.8e-09 Score=82.18 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=55.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
..+|+.+..-. . ...|++|.+|.++|||++ ||++||+|++|||+++.++.... +...+.
T Consensus 13 ~~~G~~l~gg~----------~-~~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~- 72 (89)
T 2q3g_A 13 APWGFRLQGGK----------D-FNVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIE--------AQNKIR- 72 (89)
T ss_dssp SCCCEEEEEEG----------G-GTEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHH--------HHHHHH-
T ss_pred CcccEEEECcC----------C-CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-
Confidence 34788776420 0 235899999999999999 99999999999999999763221 112222
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
..|+++.++|.|+++.
T Consensus 73 -~~g~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 73 -ACGERLSLGLSRAITS 88 (89)
T ss_dssp -TCTTEEEEEEEEECCC
T ss_pred -hCCCEEEEEEEeCCCC
Confidence 3488999999998753
No 100
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.82 E-value=3.9e-10 Score=93.37 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=59.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
.+|+.+... .+..++.+|+. ...|++|.+|.++|||++ | |++||+|++|||++|.+. .++. ..+
T Consensus 43 ~lG~~i~~~-~~~~~~~~g~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~----------~~l 110 (128)
T 1nf3_C 43 PLGFYIRDG-SSVRVTPHGLE-KVPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVT----------DMM 110 (128)
T ss_dssp CCCEEEEEE-EEEEEETTEEE-EEEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHH----------HHH
T ss_pred CccEEEEcc-ccccccccccC-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 578888766 44334445553 236899999999999999 9 999999999999999543 3332 334
Q ss_pred hccCCCCEEEEEEEECCE
Q 017471 250 SQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~ 267 (371)
. ..+++++|+|.|+++
T Consensus 111 ~--~~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 111 I--ANSRNLIITVRPANQ 126 (128)
T ss_dssp H--HTTTSEEEEEECCCC
T ss_pred H--cCCCeEEEEEEECCc
Confidence 3 346679999999885
No 101
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.82 E-value=4.2e-09 Score=81.88 Aligned_cols=61 Identities=15% Similarity=0.178 Sum_probs=48.2
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+ ...+++++++|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEE--------AVASL--KNTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HTCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCC
Confidence 46899999999999999 9 9999999999999998864321 11222 2346799999999874
No 102
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.82 E-value=6.9e-09 Score=81.30 Aligned_cols=74 Identities=14% Similarity=0.197 Sum_probs=56.3
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+.... ....|++|.+|.++|||++ | |++||+|++|||+++.+...-. +...+.
T Consensus 17 ~lG~~i~~~~-----------~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~- 76 (97)
T 1n7e_A 17 PLGITISGTE-----------EPFDPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSE--------AIHLLQ- 76 (97)
T ss_dssp CCCEEEECCS-----------STTSCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH-
T ss_pred CcCEEEEccc-----------CCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-
Confidence 4788876431 1236899999999999999 9 9999999999999998653111 113333
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
.+|++++++|.|+++.
T Consensus 77 -~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 77 -MAGETVTLKIKKQTDA 92 (97)
T ss_dssp -TCCSEEEEEEECCCCC
T ss_pred -cCCCeEEEEEEeCCCC
Confidence 5789999999998864
No 103
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.82 E-value=1.1e-08 Score=90.42 Aligned_cols=72 Identities=19% Similarity=0.361 Sum_probs=58.9
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEE---CCEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR---DSKILNFNI 273 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R---~g~~~~~~v 273 (371)
..|++|.+|.++|||++||++||+|++|||+++.+..... ........++.+.|+|.| +|+..++++
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~~~~v~l~v~r~~~~G~~~~~~v 92 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ----------AVSLLKTFQNTVELIIVREVGNGAKQEIRV 92 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHHCCSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCeEEEEEEEcCCCCCCceeEe
Confidence 5699999999999999999999999999999999876432 111112356799999999 999999998
Q ss_pred Eeccc
Q 017471 274 TLATH 278 (371)
Q Consensus 274 ~l~~~ 278 (371)
++...
T Consensus 93 ~~~~~ 97 (195)
T 2qbw_A 93 RVEKD 97 (195)
T ss_dssp EEECC
T ss_pred Eeecc
Confidence 88754
No 104
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.82 E-value=4.4e-10 Score=91.38 Aligned_cols=76 Identities=16% Similarity=0.244 Sum_probs=56.6
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEec---CCCCccccccccchhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~---~~~~l~~~~~~~~~~~~~ 248 (371)
.+|+.+...... .....|++|.+|.++|||++ | |++||+|++|||+++. +..++. ..
T Consensus 33 ~lG~~i~~~~~~--------~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~----------~~ 94 (117)
T 2o2t_A 33 GLGFSVVGLRSE--------NRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAI----------SI 94 (117)
T ss_dssp CSSCCEEEEECC--------C--CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHH----------HH
T ss_pred CCCEEEeecccC--------CCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHH----------HH
Confidence 477777654110 11236899999999999999 9 9999999999999998 444332 33
Q ss_pred hhccCCCCEEEEEEEECCEEE
Q 017471 249 VSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~ 269 (371)
+.. .|++++++|.|+++..
T Consensus 95 l~~--~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 95 LQK--AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp HHH--CCSEEEEEEESSCCGG
T ss_pred HHc--CCCEEEEEEEeCCcce
Confidence 433 6899999999998754
No 105
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.82 E-value=5.9e-09 Score=81.35 Aligned_cols=79 Identities=13% Similarity=0.236 Sum_probs=57.5
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~ 249 (371)
...+|+.+....+... ....|++|.+|.++|||++ | |++||+|++|||+++.++.... ....+
T Consensus 14 ~~~lG~~i~~~~~~~~-------~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~ 78 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKK-------LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQ--------AVEVL 78 (97)
T ss_dssp TTBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHH
T ss_pred CCCCcEEEEccCCCCC-------CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH
Confidence 3458888875421110 1246899999999999999 9 9999999999999998765321 11222
Q ss_pred hccCCCCEEEEEEEECCE
Q 017471 250 SQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~ 267 (371)
. .+|+++.++|.|+|+
T Consensus 79 ~--~~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 79 R--HTGQTVLLTLMRRGE 94 (97)
T ss_dssp H--TCCSEEEEEEEEEEE
T ss_pred H--cCCCeEEEEEEeCCC
Confidence 2 378999999999875
No 106
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=98.81 E-value=2.2e-09 Score=92.79 Aligned_cols=85 Identities=14% Similarity=0.131 Sum_probs=61.6
Q ss_pred CCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeE
Q 017471 26 CSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTE 105 (371)
Q Consensus 26 ~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~ 105 (371)
++.+++ +..++..|+|+++++.+.....+|++++++ +.+|+ .....+.|.++.+.- .
T Consensus 46 ~G~~~~---Vgf~~~~DlA~l~v~~~~~~g~~P~l~las-p~vG~-----------a~~~~~tG~~~~l~g---~----- 102 (198)
T 1mbm_A 46 GDAMLT---LTFKKNGDFAEAVTTQSELPGNWPQLHFAQ-PTTGP-----------ASWCTATGDEEGLLS---G----- 102 (198)
T ss_dssp TTEEEE---EECEEETTEEEEEECTTTSCSCCCBCCBCC-CCSEE-----------EEEEETTEEEEEEEC---S-----
T ss_pred CCEEEE---eecccCCcEEEEEeeccCCCCCCcccccCC-Ccccc-----------eEEeeccccEEEEec---C-----
Confidence 444444 677788999999994222223678899966 67776 123577788887761 1
Q ss_pred EeEEEEEeeccCCCCCCceecCCCcEEEEEee
Q 017471 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 106 ~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~ 137 (371)
...++++ +||+||||++|.+ +||||+++
T Consensus 103 ~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 103 EVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp SCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred CceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 1246777 8999999999999 99999988
No 107
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.81 E-value=3.5e-09 Score=83.40 Aligned_cols=68 Identities=16% Similarity=0.248 Sum_probs=53.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~ 249 (371)
.||+.+..- +..|++|.+|.++|||++ | |++||+|++|||++|.+ +.++. +.+
T Consensus 25 ~lG~~l~~~-------------~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~----------~~l 81 (97)
T 2ejy_A 25 PMGICLKLN-------------EKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQ----------KAM 81 (97)
T ss_dssp CCSEEEEEC-------------TTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHH----------HHH
T ss_pred CeeEEEEeC-------------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 478887643 236899999999999999 9 99999999999999996 66653 455
Q ss_pred hccCCCCEEEEEEEECC
Q 017471 250 SQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g 266 (371)
.. .+++++|+|.+..
T Consensus 82 ~~--~~~~v~L~V~~~~ 96 (97)
T 2ejy_A 82 KE--TKGMISLKVIPNQ 96 (97)
T ss_dssp HH--CCEEEEEEEECCC
T ss_pred Hc--CCCeEEEEEEECC
Confidence 44 3678888888753
No 108
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.81 E-value=4.9e-09 Score=83.10 Aligned_cols=72 Identities=22% Similarity=0.291 Sum_probs=55.3
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
-+|+.+..-. +..|++|.+|.++|||++ | |++||+|++|||+++.+..... .....
T Consensus 23 glG~~~~~~~------------~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~ 80 (104)
T 3i4w_A 23 GLGFNIVGGE------------XGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIAL 80 (104)
T ss_dssp BTSEEEEECC-------------CCCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHH----------HHHHH
T ss_pred ccCEEEECCC------------CCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 3788776541 235899999999999999 9 9999999999999998776532 12222
Q ss_pred cCCCCEEEEEEEECCE
Q 017471 252 KYTGDSAAVKVLRDSK 267 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~ 267 (371)
...++++++++.|+++
T Consensus 81 ~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 81 KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp HTSCSEEEEEEEECHH
T ss_pred HcCCCeEEEEEEECcc
Confidence 3478899999999854
No 109
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.81 E-value=3.7e-09 Score=83.68 Aligned_cols=71 Identities=23% Similarity=0.378 Sum_probs=55.5
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~ 250 (371)
.+|+.+..- .+..|++|.+|.++|||++ ||++||+|++|||++|.+.. ++. ..+.
T Consensus 18 g~G~~l~~~------------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~ 75 (102)
T 2d90_A 18 GYGFYLRAG------------PEQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVV----------EMIR 75 (102)
T ss_dssp SSSCEEEEC------------SSSSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHH----------HHHH
T ss_pred CccEEEEee------------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH
Confidence 478887653 1346899999999999999 99999999999999998864 321 3333
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
. +|+++.++|.|+++.
T Consensus 76 ~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 76 K--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp H--STTEEEEEECSTTCC
T ss_pred c--CCCEEEEEEEECCCc
Confidence 3 588999999987654
No 110
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.81 E-value=1.8e-09 Score=84.93 Aligned_cols=61 Identities=15% Similarity=0.199 Sum_probs=48.7
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+. .+|+++++++.|+++.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMD--------VVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEECSCSS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCEEEEEEEECCCc
Confidence 3789999999999999 99999999999999999443221 113333 4799999999998753
No 111
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=2e-09 Score=83.93 Aligned_cols=61 Identities=18% Similarity=0.185 Sum_probs=49.0
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..+++|.+|.++|||++ ||++||+|++|||+++.++.... +...+ ..+|++++++|.|+++
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLE--------AQNRI--KGCHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHH--------HHHHH--HTCCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCC
Confidence 35799999999999999 99999999999999999874322 11222 2368889999999875
No 112
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.80 E-value=2.3e-09 Score=87.19 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=57.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.... ......|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.
T Consensus 30 ~glG~~i~g~~~~~------~~~~~~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~ 95 (117)
T 1ujd_A 30 NGLGIRIVGGKEIP------GHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE--------VQSIIS 95 (117)
T ss_dssp CSCSEEEEEEEECS------SSSSCEEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH--------HHHHHS
T ss_pred CcccEEEeCCCCCC------cccCCcCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH--------HHHHHh
Confidence 56888886441100 011234899999999999999 9 9999999999999998754321 112232
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
.++++++|+|.|+++.
T Consensus 96 --~~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 96 --QQSGEAEICVRLDLNM 111 (117)
T ss_dssp --CCSSCEEEEEESSCCC
T ss_pred --cCCCEEEEEEEECCcc
Confidence 3688999999998864
No 113
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.80 E-value=5.7e-09 Score=81.53 Aligned_cols=61 Identities=13% Similarity=0.259 Sum_probs=48.7
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+. ..|++++++|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLR--NTGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--SCCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcCCC
Confidence 46899999999999999 9 9999999999999999663211 112332 368999999999874
No 114
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.80 E-value=3.6e-09 Score=80.72 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=48.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 264 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R 264 (371)
..+++|.+|.++|||++ | |++||+|++|||+++.++..-. +.+.+....+|++++++|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQ--------VVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEC
Confidence 35799999999999999 9 9999999999999998653211 22455555568999999876
No 115
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.80 E-value=5.1e-09 Score=83.73 Aligned_cols=59 Identities=19% Similarity=0.130 Sum_probs=47.4
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|.+|.++|||++ | |++||+|++|||++|.+..+.. .......++++++++|.|..
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------CYALFKGANGKVSMEVTRPK 85 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHH----------HHHHHHSCBSCEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhCCCCeEEEEEEeCC
Confidence 6899999999999999 9 9999999999999998765432 12222345678999999964
No 116
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.79 E-value=5.1e-09 Score=82.81 Aligned_cols=74 Identities=14% Similarity=0.095 Sum_probs=57.1
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEe--cCCCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V--~~~~~l~~~~~~~~~~~~~ 248 (371)
.+||+.+..-.. + ....+++|.+|.++|||++ + |++||+|++|||+++ .++.++. +.
T Consensus 21 ~~lG~~i~~~~~-------~--~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~----------~~ 81 (101)
T 2yt7_A 21 EGLGVALVESGW-------G--SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQ----------AA 81 (101)
T ss_dssp CCCCEEEEECCC-------S--SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHH----------HH
T ss_pred CccCEEEEeCCC-------C--CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 478999874310 1 1234799999999999998 4 999999999999999 6666654 56
Q ss_pred hhccCCCCEEEEEEEEC
Q 017471 249 VSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~ 265 (371)
+....+|++++|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 66555889999999884
No 117
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.79 E-value=2.2e-09 Score=84.92 Aligned_cols=81 Identities=16% Similarity=0.138 Sum_probs=58.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.+. .......|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.
T Consensus 15 ~glG~~i~~g~~~------~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~ 80 (102)
T 2i1n_A 15 SGLGFSIAGGIDN------PHVPDDPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSR--------AVEALK 80 (102)
T ss_dssp TBTSEEEEECTTS------CSSTTCCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHH
T ss_pred CcCCEEEEcccCC------CCcCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 3588888753110 0011246999999999999999 9 9999999999999998754321 112232
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 017471 251 QKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~~ 269 (371)
.+|+++.++|.|+++..
T Consensus 81 --~~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 81 --EAGPVVRLVVRRRQPPP 97 (102)
T ss_dssp --HSCSEEEEEEEEECCCC
T ss_pred --cCCCeEEEEEEeCCCCC
Confidence 26899999999988754
No 118
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.78 E-value=6.5e-10 Score=89.75 Aligned_cols=68 Identities=10% Similarity=0.156 Sum_probs=53.6
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 274 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~ 274 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+. ..|++++++|.|+++..+++++
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~~~~~v~ 103 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLR--NTKGRVRFMIGRERPGEQSEVA 103 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH--------HHHHHH--HSCSSCEEEEEECCCCTTSSCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCeEEEEEEeCCCCCcchhh
Confidence 46999999999999999 9 9999999999999998765432 112222 2588999999999987555443
No 119
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.78 E-value=6.5e-09 Score=80.96 Aligned_cols=72 Identities=22% Similarity=0.357 Sum_probs=53.5
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
.-+|+.+..-. ...|++|.+|.++|||++ ||++||+|++|||+++.++ .++. ..+
T Consensus 16 ~~~G~~l~~~~------------~~~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l 73 (95)
T 3r68_A 16 NGYGFYLRAGP------------EQKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVV----------EMI 73 (95)
T ss_dssp TBCSCEEEEC--------------CCSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHH----------HHH
T ss_pred CcccEEEEecC------------CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 34777776431 224899999999999999 9999999999999999988 4442 344
Q ss_pred hccCCCCEEEEEEEECCEE
Q 017471 250 SQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~ 268 (371)
.. .++++.+.+.|.+..
T Consensus 74 ~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 74 RK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp HT--TTTEEEEEEEECC--
T ss_pred Hh--CCCeEEEEEECCccc
Confidence 33 567788888776654
No 120
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.78 E-value=8e-09 Score=80.54 Aligned_cols=60 Identities=25% Similarity=0.440 Sum_probs=48.4
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
..|++|.+|.++|||++||++||+|++|||+++.+..+.. ....+ ..++++++++|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHH--------HHHHH--HHCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHH--------HHHHh--hcCCCeEEEEEEeCC
Confidence 4699999999999998899999999999999998865432 11122 246899999999964
No 121
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.78 E-value=4.3e-09 Score=83.65 Aligned_cols=71 Identities=20% Similarity=0.274 Sum_probs=55.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~ 249 (371)
.++|+.+..-. ....|++|.+|.++|||++ ||++||+|++|||++|.+ ..++. ..+
T Consensus 27 ~~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGGK-----------ASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAV----------EIL 85 (104)
T ss_dssp CCCSEEEECCS-----------SSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHH----------HHH
T ss_pred CCccEEEEccc-----------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 57899887531 1236899999999999999 999999999999999988 33332 333
Q ss_pred hccCCCCEEEEEEEECCE
Q 017471 250 SQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~ 267 (371)
.. ++++.++|.|+..
T Consensus 86 ~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 86 KT---AREISMRVRFFSG 100 (104)
T ss_dssp HH---SSSEEEEEECCCC
T ss_pred hC---CCEEEEEEEECCC
Confidence 33 7889999998754
No 122
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.78 E-value=6.6e-09 Score=84.56 Aligned_cols=72 Identities=22% Similarity=0.298 Sum_probs=57.0
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+... . +..|++|.+|.++|||++ | |++||+|++|||+++.++.+.. .....
T Consensus 26 glG~~l~~~-~-----------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~~ 83 (119)
T 1tp5_A 26 GLGFNIVGG-E-----------DGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIAL 83 (119)
T ss_dssp CCCEEEEEC-G-----------GGCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH----------HHHHH
T ss_pred CccEEEecC-C-----------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 378888754 1 136899999999999999 9 9999999999999999886543 22222
Q ss_pred cCCCCEEEEEEEECCE
Q 017471 252 KYTGDSAAVKVLRDSK 267 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~ 267 (371)
..+|+++.++|.|+++
T Consensus 84 ~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 84 KNAGQTVTIIAQYKPE 99 (119)
T ss_dssp HTSCSEEEEEEEECHH
T ss_pred HcCCCeEEEEEEECCc
Confidence 3478999999999764
No 123
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.77 E-value=8.4e-09 Score=79.70 Aligned_cols=73 Identities=15% Similarity=0.213 Sum_probs=51.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhcc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 252 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~ 252 (371)
.+|+.+..-. +..|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+. .
T Consensus 15 g~G~~~~~~~------------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~l~-~ 73 (91)
T 1g9o_A 15 GYGFHLHGEK------------GKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQ--------VVSRIR-A 73 (91)
T ss_dssp BCCEEEEECT------------TCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHH-T
T ss_pred cccEEEEecC------------CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-c
Confidence 4788776541 236899999999999999 99999999999999998854322 112332 3
Q ss_pred CCCCEEEEEEEECCE
Q 017471 253 YTGDSAAVKVLRDSK 267 (371)
Q Consensus 253 ~~g~~v~l~v~R~g~ 267 (371)
..++.+.+.+.|+++
T Consensus 74 ~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 74 ALNAVRLLVVDPETD 88 (91)
T ss_dssp CSSEEEEEEECCCCS
T ss_pred CCCcEEEEEEcCCcc
Confidence 345555556666654
No 124
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.77 E-value=2e-09 Score=86.09 Aligned_cols=81 Identities=15% Similarity=0.340 Sum_probs=58.4
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~ 249 (371)
...+|+.+....+.. ......|++|.+|.++|||++ | |++||+|++|||++|.++..-. +...+
T Consensus 24 ~~~lG~~~~~~~~~~------~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l 89 (108)
T 2jre_A 24 TSSLGISISGMRDQS------TTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSD--------VVEVL 89 (108)
T ss_dssp TSCCSEEEECCCCCS------CSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHH--------HHHHH
T ss_pred CCCcCEEEEcccCCC------CCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH
Confidence 345888886542110 011346899999999999999 9 9999999999999999863211 11333
Q ss_pred hccCCCCEEEEEEEECCEE
Q 017471 250 SQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~ 268 (371)
.. +|+++.|+|.|+++.
T Consensus 90 ~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 90 RN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp HH--HCSEEEEEEEECCCC
T ss_pred Hc--CCCeEEEEEEeCCcC
Confidence 33 688999999999865
No 125
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.77 E-value=2.9e-09 Score=87.90 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=50.4
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
.+++|.+|.++|||++ | |++||+|++|||++|. ++.++. ..+....+|++++|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~----------~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFL----------KLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHH----------HHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHH----------HHHhcCCCCCEEEEEEEEC
Confidence 5789999999999999 9 9999999999999995 556654 5666667899999999998
No 126
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.76 E-value=7.2e-09 Score=81.08 Aligned_cols=57 Identities=19% Similarity=0.341 Sum_probs=47.1
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
..|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+... +++++++|.|+
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIV----------DIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHHT--TTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhC--CCeEEEEEEEC
Confidence 35899999999999999 9999999999999999985 4432 445443 56899999875
No 127
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=4.6e-09 Score=81.54 Aligned_cols=69 Identities=20% Similarity=0.249 Sum_probs=55.6
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEe-cCCCCccccccccchhhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI-ANDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V-~~~~~l~~~~~~~~~~~~~ 248 (371)
..++|+.+..- ..+++|.+|.++|||++ | |++||+|++|||+++ .++.++. +.
T Consensus 17 ~~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~----------~~ 72 (91)
T 2e7k_A 17 GEHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQ----------EL 72 (91)
T ss_dssp TCCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHH----------HH
T ss_pred CCcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHH----------HH
Confidence 35789998752 36899999999999999 7 999999999999999 6666653 45
Q ss_pred hhccCCCCEEEEEEEECC
Q 017471 249 VSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g 266 (371)
+.. .+++++++|.|..
T Consensus 73 l~~--~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 73 LRN--ASGSVILKILSGP 88 (91)
T ss_dssp HHT--CCSSBCEEEECCS
T ss_pred HHc--CCCeEEEEEEECC
Confidence 543 4678999998853
No 128
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.76 E-value=8.5e-09 Score=81.34 Aligned_cols=79 Identities=19% Similarity=0.226 Sum_probs=56.9
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.+. .......|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+.
T Consensus 18 ~~lG~~l~~g~~~------~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~ 83 (101)
T 2jik_A 18 SGLGFNIVGGTDQ------QYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFR 83 (101)
T ss_dssp TCCCEEEEECTTS------CSBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHH
T ss_pred CCCCEEEeccccC------CCccCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 4588888753110 0111246899999999999999 9 9999999999999999874322 112222
Q ss_pred ccCCCCEEEEEEEECCE
Q 017471 251 QKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~ 267 (371)
..|++++++|.|+++
T Consensus 84 --~~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 84 --NAGYAVSLRVQHRLE 98 (101)
T ss_dssp --TCCSEEEEEEEEESC
T ss_pred --hCCCeEEEEEEeCCC
Confidence 358899999999875
No 129
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=2.4e-09 Score=85.03 Aligned_cols=76 Identities=17% Similarity=0.140 Sum_probs=56.0
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..- .+ ...+++|.+|.++|||++ | |++||+|++|||++|.+...-. +.+.+.
T Consensus 20 ~g~G~~i~~g----------~~-~~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~ 80 (103)
T 1uep_A 20 SGFGFRILGG----------DE-PGQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRY--------VIDLMH 80 (103)
T ss_dssp SSCCEEECCC----------CS-TTSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHH--------HHHHHH
T ss_pred CccCEEEeee----------cC-CCCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 3478877532 11 246899999999999999 9 9999999999999997643111 123444
Q ss_pred ccCCCCEEEEEEEECCE
Q 017471 251 QKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~ 267 (371)
...+|++++|+|.|+++
T Consensus 81 ~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 81 HAARNGQVNLTVRRKVL 97 (103)
T ss_dssp HHHHHTEEEEEEEEECC
T ss_pred hCCCCCcEEEEEEeCCC
Confidence 43348899999999875
No 130
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=4.9e-09 Score=80.83 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=55.0
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc--CCCCCCEEEEECCEEec--CCCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~ 248 (371)
..+|+++..- ...+++|.+|.++|||++ ||++||+|++|||+++. ++.++. +.
T Consensus 13 ~~lG~~i~~~-------------~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~----------~~ 69 (88)
T 1kwa_A 13 EPMGITLKMN-------------ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQ----------KM 69 (88)
T ss_dssp SCCCEEEECS-------------CGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHH----------HH
T ss_pred CceeEEEEeC-------------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 3588888642 125799999999999998 69999999999999998 666543 44
Q ss_pred hhccCCCCEEEEEEEECCE
Q 017471 249 VSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~ 267 (371)
+.. .++ +++++|.|.++
T Consensus 70 l~~-~~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 70 LRE-MRG-SITFKIVPSYR 86 (88)
T ss_dssp HHH-CCE-EEEEEEECCCC
T ss_pred Hhc-CCC-cEEEEEECCcC
Confidence 544 355 89999999875
No 131
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.74 E-value=3.6e-09 Score=87.44 Aligned_cols=79 Identities=16% Similarity=0.311 Sum_probs=60.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+....+... + ....|++|.+|.++|||++ | |++||+|++|||+++.+ ..++. +.
T Consensus 27 ~~lG~~i~~~~~~~~---~---~~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~----------~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH---T---GEASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVV----------EV 90 (129)
T ss_dssp CCCCEEEEEECCCSS---S---CCCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHH----------HH
T ss_pred CCcCEEEEeecCCcc---c---CCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 458888876522111 1 1346899999999999999 9 99999999999999988 44432 44
Q ss_pred hhccCCCCEEEEEEEECCEEE
Q 017471 249 VSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~~~ 269 (371)
+.. +|+.+.|+|.|+++..
T Consensus 91 l~~--~~~~v~l~v~R~~~~~ 109 (129)
T 2dmz_A 91 LRN--AGQVVHLTLVRRKTSS 109 (129)
T ss_dssp HHH--CCSSEEEEEEEESSSS
T ss_pred HHc--CCCeEEEEEEeCCccc
Confidence 444 7899999999998754
No 132
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.74 E-value=9.5e-09 Score=82.85 Aligned_cols=74 Identities=16% Similarity=0.165 Sum_probs=55.8
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..-. + ...|++|.+|.++|||++ | |++||+|++|||++|.+..... ....+
T Consensus 36 glG~~l~~~~----------~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l-- 94 (112)
T 2r4h_A 36 GFGFSLRGGR----------E-YNMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSR--------AIELI-- 94 (112)
T ss_dssp BTSEEEEECG----------G-GTCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHH--
T ss_pred ccCEEEeccc----------c-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--
Confidence 4788876430 0 236899999999999999 9 9999999999999998864321 11222
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
...|++++|+|.|+++.
T Consensus 95 ~~~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 95 KNGGRRVRLFLKRGETS 111 (112)
T ss_dssp HTTTTEEEEEEECCEEE
T ss_pred HcCCCeEEEEEEeCCcc
Confidence 23688999999998764
No 133
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.74 E-value=7.4e-09 Score=84.93 Aligned_cols=61 Identities=16% Similarity=0.296 Sum_probs=50.8
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||++|.+. .++ .+.+....+|++++|+|.|++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADV----------VKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHH----------HHHHHTSCTTCEEEEEEEESCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEeCCC
Confidence 46899999999999999 9 999999999999999854 333 2455555569999999999873
No 134
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=3.5e-09 Score=86.78 Aligned_cols=61 Identities=13% Similarity=0.182 Sum_probs=52.3
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.+++|.+|.++|||++ | |++||+|++|||++|.+ +.++. +.+....+|++++|+|.|+++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEAN----------QLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHH----------HHHHHHTTTTCEEEEEEEECCC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhCCCCCeEEEEEEECCcc
Confidence 4689999999999999 9 99999999999999987 55543 5666666689999999998864
No 135
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.73 E-value=3.9e-09 Score=87.00 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=62.0
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~ 250 (371)
.+|+.+... ....|++|.+|.++|||++ ||++||+|++|||+++.+ ..++. ..+.
T Consensus 21 g~G~~l~~~------------~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~ 78 (128)
T 2kjd_A 21 GYGFNLHSD------------KSKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIR 78 (128)
T ss_dssp SCCEEEEEC------------SSSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHH
T ss_pred cccEEEEec------------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH
Confidence 478877654 1235899999999999999 999999999999999988 55543 4555
Q ss_pred ccCCCCEEEEEEEECCEEEE--EEEEe
Q 017471 251 QKYTGDSAAVKVLRDSKILN--FNITL 275 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~~~--~~v~l 275 (371)
.. +++.+.+++.|+|+..+ +++++
T Consensus 79 ~~-~~~~~~l~v~R~g~~~~~~~~l~~ 104 (128)
T 2kjd_A 79 AG-GDETKLLVVDRETDEFFKKCRVIP 104 (128)
T ss_dssp TT-CSEEEEEEECHHHHHHHHHHTCCC
T ss_pred hC-CCCEEEEEEEeCCcceEEEEEEEe
Confidence 44 78889999999998766 44444
No 136
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.73 E-value=4.3e-09 Score=81.23 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=53.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..- .+ ...+++|.+|.++|||++ | |++||+|++|||+++.+..... +...+..
T Consensus 14 g~G~~~~~g----------~~-~~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~ 74 (90)
T 2q9v_A 14 GFGFRILGG----------NE-PGEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQL--------VVQLMQQ 74 (90)
T ss_dssp BCCEEEEEC----------SS-TTSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHHHH
T ss_pred ccCEEEEcc----------cc-CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh
Confidence 478877643 11 235799999999999999 9 9999999999999996543211 1234444
Q ss_pred cCCCCEEEEEEEECC
Q 017471 252 KYTGDSAAVKVLRDS 266 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g 266 (371)
...+++++++|.|.+
T Consensus 75 ~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 75 AAKQGHVNLTVRQTR 89 (90)
T ss_dssp HHHHTEEEEEEEECC
T ss_pred CCCCCeEEEEEEecc
Confidence 434568999999864
No 137
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.73 E-value=2e-08 Score=78.70 Aligned_cols=59 Identities=17% Similarity=0.231 Sum_probs=47.4
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++ |++ ||++||+|++|||++|.+. .++. +.+....+|++++|+|.|+++.
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVV----------DILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHH----------HHHHHSCTTSEEEEEEECCSSC
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcCCCCCEEEEEEEECCCC
Confidence 48999999983 566 9999999999999999876 3432 4555554699999999998863
No 138
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.72 E-value=2.5e-09 Score=87.51 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=49.7
Q ss_pred CCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 197 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... ....+ ...+++++|+|.|+|+..+
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~--------~~~~l--~~~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ--------AVNLL--KNASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HHCCSEEEEEEECCTTSSS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECCccce
Confidence 35899999999999986 89999999999999998864322 11222 2347789999999987543
No 139
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=1.3e-08 Score=81.39 Aligned_cols=62 Identities=13% Similarity=0.252 Sum_probs=49.7
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.. .|++++++|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSH--------HHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999999543322 1123332 589999999999864
No 140
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.71 E-value=8.9e-09 Score=82.81 Aligned_cols=60 Identities=22% Similarity=0.208 Sum_probs=46.8
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.+++|.+|.++|||++ ||++||+|++|||++|.++ .++. ..+. ...+++++++|.|....
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~----------~~i~-~~~~~~v~l~V~~~~~~ 106 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVM----------KLLK-SFGEDEIEMKVVSLLDE 106 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHH-TTTTSCEEEEEESCC--
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH-hCCCCeEEEEEEECCCc
Confidence 4789999999999999 9999999999999999965 5543 3443 33455699999886543
No 141
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=1.1e-08 Score=81.18 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=56.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+....+. ....+++|.+|.++|||++ | |++||+|++|||++|.++.... +...+.
T Consensus 22 ~g~G~~l~~~~~~---------~~~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~ 84 (104)
T 2djt_A 22 AGFGLTLGGGRDV---------AGDTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQ--------AVERIR 84 (104)
T ss_dssp SSCCEEEECCEET---------TEECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHH--------HHHHHH
T ss_pred CCccEEEEeccCC---------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 3478877643110 0136899999999999999 9 9999999999999998864221 112222
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
. +|+++.|+|.|+|+.
T Consensus 85 ~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 85 A--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp H--TCSEEEEEECCCCCC
T ss_pred c--CCCeEEEEEEECCCC
Confidence 2 689999999998864
No 142
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=9.1e-09 Score=83.76 Aligned_cols=77 Identities=17% Similarity=0.155 Sum_probs=54.9
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..-.+ .+....|++|.+|.++|||++ | |++||+|++|||++|.+..... +...+..
T Consensus 37 glGf~l~~g~~--------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~ 100 (117)
T 2fne_A 37 GLGFSIVGGYG--------SPHGDLPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEE--------AVAILKR 100 (117)
T ss_dssp BTSEEEEEEEE--------ETTEEEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH
T ss_pred cccEEEecccC--------CCCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc
Confidence 47888764310 011235899999999999999 9 9999999999999998543211 1123332
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
.+++++|+|.|+|+.
T Consensus 101 --~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 101 --TKGTVTLMVLSSDET 115 (117)
T ss_dssp --CCSSEEEEEEECSCE
T ss_pred --CCCeEEEEEEeCCcc
Confidence 455799999999875
No 143
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.70 E-value=8.8e-09 Score=83.21 Aligned_cols=59 Identities=22% Similarity=0.274 Sum_probs=48.5
Q ss_pred CceEEEEECCCCcccc-CC-CCCCEEEEECCEEecCCC--CccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL-~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++|||++ || ++||+|++|||++|.+.. ++. ..+.. .++++.++|.|+++.
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVF----------DLLSD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--CCEEEEEEEECCCCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECCcc
Confidence 6899999999999999 99 999999999999998543 432 34433 346899999999875
No 144
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.70 E-value=1.1e-08 Score=84.93 Aligned_cols=61 Identities=16% Similarity=0.212 Sum_probs=51.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+. .++. ..+....+|++++|+|.|++.
T Consensus 64 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~----------~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 64 RLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVY----------NIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp CEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHH----------HHHHHTSSSSEEEEEEEEECS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhcCCCCEEEEEEEcCCC
Confidence 35899999999999999 9 999999999999999875 3332 456555678999999999764
No 145
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.69 E-value=2e-08 Score=80.66 Aligned_cols=72 Identities=22% Similarity=0.284 Sum_probs=55.0
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..- ...|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+..
T Consensus 27 ~lG~~l~~~-------------~~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~ 85 (111)
T 2dlu_A 27 GLGFGIVGG-------------KTSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQ--------VAQVLRN 85 (111)
T ss_dssp CCCEEEECC-------------SSSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHH--------HHHHHHH
T ss_pred ccCEEEecc-------------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh
Confidence 478877633 236899999999999999 9 9999999999999998653211 1233333
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
.|+++.++|.|++..
T Consensus 86 --~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 86 --CGNSVRMLVARDPAG 100 (111)
T ss_dssp --HCSEEEEEEEESCTT
T ss_pred --CCCeEEEEEEeCCCC
Confidence 478999999998754
No 146
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=1.9e-08 Score=81.77 Aligned_cols=78 Identities=10% Similarity=0.088 Sum_probs=55.8
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+++..-.... ......|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.
T Consensus 36 glG~~i~gg~~~~------~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~- 100 (117)
T 2byg_A 36 GLGFSIAGGVGNQ------HIPGDNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEE--------AVAILK- 100 (117)
T ss_dssp BSSEEEEECTTSC------SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH-
T ss_pred CcCEEEEcccCCC------CccCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-
Confidence 4788877431100 011346899999999999999 9 9999999999999998543221 112332
Q ss_pred cCCCCEEEEEEEECCE
Q 017471 252 KYTGDSAAVKVLRDSK 267 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~ 267 (371)
..|++++|+|.|+++
T Consensus 101 -~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 101 -NTSEVVYLKVGKPTT 115 (117)
T ss_dssp -TCCSEEEEEEEEEEE
T ss_pred -cCCCeEEEEEEeCCc
Confidence 358999999999875
No 147
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.67 E-value=1.9e-08 Score=82.57 Aligned_cols=76 Identities=12% Similarity=0.206 Sum_probs=56.3
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-. .....|++|.+|.++|||++ | |++||+|++|||++|.+..... ....+
T Consensus 36 ~glG~~l~~~~----------~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~--------~~~~~- 96 (124)
T 2daz_A 36 NGLGLSLAGNK----------DRSRMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQN--------ASAII- 96 (124)
T ss_dssp SCCCEEEECBS----------STTSCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHH--------HHHHH-
T ss_pred CccCEEEeccC----------CCCcCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-
Confidence 35788876431 11235899999999999999 9 9999999999999998765432 11122
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
...++++.|+|.|+++.
T Consensus 97 -~~~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 97 -KTAPSKVKLVFIRNEDA 113 (124)
T ss_dssp -HHSCSEEEEEEEECTTH
T ss_pred -HcCCCeEEEEEEeCCCc
Confidence 23467999999999864
No 148
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=1.2e-08 Score=81.41 Aligned_cols=61 Identities=15% Similarity=0.207 Sum_probs=49.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+. ..+++++|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF--------AATVLR--NTKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH--------HHHHHH--HCCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCeEEEEEEeCCC
Confidence 46899999999999999 9 9999999999999998765432 112232 258999999999764
No 149
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.66 E-value=8.8e-09 Score=78.22 Aligned_cols=57 Identities=16% Similarity=0.181 Sum_probs=46.4
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--CccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|.+|.++|||++ ||++||+|++|||+++.++. ++. ..+. ..+++++++|.|+.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~--~~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVV----------KLIG--KCSGVLHMVIAEGV 82 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHH----------HHHT--TCSSCEEEEEECCC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCeEEEEEEcCC
Confidence 4789999999999999 99999999999999999883 332 3332 34677999999863
No 150
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.65 E-value=1.6e-08 Score=80.03 Aligned_cols=60 Identities=25% Similarity=0.440 Sum_probs=48.4
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
..|++|.+|.++|||++||++||+|++|||+++.+..... ....+ ...|++++++|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHH--------HHHHH--HHCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHH--------HHHHh--hcCCCeEEEEEEecC
Confidence 4689999999999999899999999999999998865432 11222 246899999999974
No 151
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.65 E-value=1.4e-08 Score=81.36 Aligned_cols=76 Identities=13% Similarity=0.220 Sum_probs=55.1
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~ 249 (371)
-+|+.+..-.+ . ....|++|.+|.++|||++ | |++||+|++|||+++.+. .++. ..+
T Consensus 18 ~lG~~i~g~~~--------~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l 78 (108)
T 3cbz_A 18 FLGISIVGQSN--------E-RGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAV----------RVL 78 (108)
T ss_dssp CCCEEEEEECS--------S-TTCCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHH----------HHH
T ss_pred ccCEEEEcCcC--------C-CCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 47777765411 1 1246899999999999999 9 999999999999999984 3332 444
Q ss_pred hcc-CCCCEEEEEEEECCEE
Q 017471 250 SQK-YTGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~-~~g~~v~l~v~R~g~~ 268 (371)
... .++..++|+|.|.++.
T Consensus 79 ~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 79 RDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp HHHHTSSSCEEEEEECCCC-
T ss_pred HhcccCCCeEEEEEEeCCCC
Confidence 443 1244699999998754
No 152
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.64 E-value=1.2e-08 Score=80.32 Aligned_cols=57 Identities=16% Similarity=0.091 Sum_probs=47.0
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhcc-CCCCEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQK-YTGDSAAVKVL 263 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~-~~g~~v~l~v~ 263 (371)
..+.+|.+|.++|||++ ||++||+|++|||++|. +++++. ..+.+. ..|+.+.|.|-
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~----------~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVE----------SILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHH----------HHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHH----------HHHHHhhccCCeEEEEEe
Confidence 35789999999999999 99999999999999984 777764 555553 46888888774
No 153
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.3e-08 Score=80.87 Aligned_cols=61 Identities=18% Similarity=0.303 Sum_probs=48.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+. ..+++++|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDH--------AVSLLT--AASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHH--------HHHHHT--SCCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 46899999999999999 9 9999999999999998744211 112332 248889999999864
No 154
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.63 E-value=3.1e-08 Score=77.32 Aligned_cols=50 Identities=20% Similarity=0.216 Sum_probs=41.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND 232 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~ 232 (371)
..+|+.+..+ +++ ...|++|.+|.++|||++ ||++||+|++|||++|.+.
T Consensus 20 ~~~Gf~v~~~-~~~---------~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~ 70 (94)
T 3kzd_A 20 DTYGFSLSSV-EED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADAL 70 (94)
T ss_dssp -CCSEEEEEE-CSS---------SSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGC
T ss_pred CCcCEEEEec-CCC---------CcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 4589998876 211 235899999999999999 9999999999999999975
No 155
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=1.9e-08 Score=81.96 Aligned_cols=80 Identities=19% Similarity=0.249 Sum_probs=57.9
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.+.. ......|++|.+|.++|||++ | |++||+|++|||++|.+..... +...+.
T Consensus 28 ~~lG~~i~~~~~~~------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~ 93 (120)
T 2eno_A 28 SGLGFNIVGGTDQQ------YVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFR 93 (120)
T ss_dssp SSCSEEEECCTTTC------SSSSCCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHH--------HHHHHH
T ss_pred CCCCEEEecccCCc------cccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 46888887531110 011246999999999999999 9 9999999999999999876221 112332
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
. .|++++|+|.|+++.
T Consensus 94 ~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 94 N--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp H--HCSEEEEEEEEEEEC
T ss_pred c--CCCeEEEEEEeCCcC
Confidence 2 488999999998764
No 156
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.63 E-value=3.5e-08 Score=81.60 Aligned_cols=62 Identities=13% Similarity=0.185 Sum_probs=50.7
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
.+++|.+|.++|||++ | |++||+|++|||++|.+..... +.+.+....+|++++|+|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQ--------VVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHH--------HHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEeCCC
Confidence 5799999999999999 9 9999999999999998654211 22556555569999999999873
No 157
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.62 E-value=1.8e-08 Score=83.15 Aligned_cols=74 Identities=20% Similarity=0.259 Sum_probs=54.6
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEec---CCCCccccccccchhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYL 248 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~---~~~~l~~~~~~~~~~~~~ 248 (371)
-+|+.+...... .....|++|.+|.++|||++ | |++||+|++|||++|. +..++. ..
T Consensus 38 ~lG~~i~g~~~~--------~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~----------~~ 99 (128)
T 2db5_A 38 GLGFSVVALRSQ--------NLGKVDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAI----------AL 99 (128)
T ss_dssp CCCCEEEEEECS--------SSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHH----------HH
T ss_pred ccCEEEecccCC--------CCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHH----------HH
Confidence 578887643110 11235899999999999999 9 9999999999999997 333322 33
Q ss_pred hhccCCCCEEEEEEEECCE
Q 017471 249 VSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g~ 267 (371)
+.. .|++++|+|.|+..
T Consensus 100 l~~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 100 LQQ--TTGSLRLIVAREPV 116 (128)
T ss_dssp HHH--CCSEEEEEEEECCC
T ss_pred HHc--CCCeEEEEEEcCCC
Confidence 333 68899999999854
No 158
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.62 E-value=3.1e-08 Score=76.86 Aligned_cols=71 Identities=15% Similarity=0.242 Sum_probs=51.7
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEe--cCCCCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V--~~~~~l~~~~~~~~~~~~~~ 249 (371)
-+|+.+..- ....+++|.+|.++|||++ | |++||+|++|||+++ .++.++. ..+
T Consensus 16 ~lG~~i~~~------------~~~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~----------~~l 73 (93)
T 3o46_A 16 PLGATIKKD------------EQTGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEII----------QIL 73 (93)
T ss_dssp CCCEEEEEC------------TTTCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHH----------HHH
T ss_pred CccEEEEec------------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 477777643 1246899999999999999 9 999999999999999 4444432 344
Q ss_pred hccCCCCEEEEEEEECCEE
Q 017471 250 SQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~ 268 (371)
.. .+++++++|.|..+.
T Consensus 74 ~~--~~~~v~l~v~~~~~~ 90 (93)
T 3o46_A 74 AQ--SQGAITFKIIPGSKE 90 (93)
T ss_dssp HH--CCEEEEEEEECC---
T ss_pred Hh--CCCeEEEEEEeCCCC
Confidence 33 334899999987653
No 159
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.61 E-value=3.4e-08 Score=79.02 Aligned_cols=57 Identities=19% Similarity=0.259 Sum_probs=47.1
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|..|.++|||++ ||++||+|++|||++|.++ .++. ..+.. .|+++.++|.|.+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVV----------NMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--TTTEEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHh--CCCEEEEEEEECC
Confidence 4899999999999999 9999999999999999988 4432 33333 4788999998853
No 160
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=9.4e-09 Score=79.70 Aligned_cols=54 Identities=11% Similarity=0.158 Sum_probs=44.2
Q ss_pred ceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 199 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 199 gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
| +|.+|.++|||++ ||++||+|++|||++|. +..++. ..+.. .|++++++|.+.
T Consensus 33 G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 33 G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIV----------HILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHH----------HHHHH--CCEEEEEEEECC
T ss_pred C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEEC
Confidence 5 8999999999999 99999999999999995 445543 44543 488999998875
No 161
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.61 E-value=1.3e-08 Score=79.66 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=47.3
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
..+++|.+|.++|||+.||++||+|++|||++|.+..... ....+. .+|++++++|.|++
T Consensus 30 ~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWER--------AVDILR--EAEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHH--------HHHHHH--HCSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECC
Confidence 3589999999999995599999999999999998764332 111222 27899999999986
No 162
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.60 E-value=1.2e-08 Score=100.13 Aligned_cols=107 Identities=10% Similarity=0.111 Sum_probs=52.2
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
.|++|.+|.++|||++ | |++||+|++|||+++.++.... +...+....++.+++++|.|+++..++.++.
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 4689999999999999 9 9999999999999999884322 1144545556788999999998776655432
Q ss_pred ccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 276 ATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
..... .+|+.+ .+.++..+.++|||+..-...+|.|.
T Consensus 304 ~~~~~---------------~lG~~i----------------~~g~I~~V~~gs~A~~aGL~~GD~Il 340 (388)
T 3suz_A 304 PDLKY---------------QLGFSV----------------QNGIICSLMRGGIAERGGVRVGHRII 340 (388)
T ss_dssp --------------------------------------------------------------------
T ss_pred cCCCC---------------ccceEE----------------ecCEEEEeecCCHHHHcCCCCCCEEE
Confidence 11000 134432 11267788889998887777777764
No 163
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.60 E-value=1.3e-08 Score=81.02 Aligned_cols=73 Identities=12% Similarity=0.225 Sum_probs=54.2
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhcc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 252 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~ 252 (371)
-+|+.+... ....|++|.+|.++|||++ ||++||+|++|||+++.+..... +...+.
T Consensus 20 ~~G~~l~~~------------~~~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~-- 77 (106)
T 2eei_A 20 SYGFSLKTV------------QGKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEE--------VVEKVK-- 77 (106)
T ss_dssp SCSCCEECC------------SSCCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHH--
T ss_pred CCCEEEEec------------cCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--
Confidence 467777543 1246899999999999999 99999999999999998654321 112222
Q ss_pred CCCCEEEEEEEECCEE
Q 017471 253 YTGDSAAVKVLRDSKI 268 (371)
Q Consensus 253 ~~g~~v~l~v~R~g~~ 268 (371)
..++++.+++.|++..
T Consensus 78 ~~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 78 KSGSRVMFLLVDKETD 93 (106)
T ss_dssp HHCSEEEEEECCTTTS
T ss_pred hCCCeEEEEEEcCchh
Confidence 2478899999987753
No 164
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.60 E-value=6.1e-08 Score=78.98 Aligned_cols=76 Identities=21% Similarity=0.250 Sum_probs=54.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..-.. -+....|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.
T Consensus 36 ~~lGf~i~gg~~--------~~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~ 99 (118)
T 3b76_A 36 ESLGMTVAGGAS--------HREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSE--------AVALLK 99 (118)
T ss_dssp CCCCEEEEECSC--------STTCCCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHH--------HHHHHH
T ss_pred CccCEEEecCCC--------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 357888765411 112346899999999999999 9 9999999999999999443221 113333
Q ss_pred ccCCCCEEEEEEEECC
Q 017471 251 QKYTGDSAAVKVLRDS 266 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g 266 (371)
..+++++|+|.|..
T Consensus 100 --~~~~~v~L~v~R~~ 113 (118)
T 3b76_A 100 --RTSSSIVLKALEVK 113 (118)
T ss_dssp --SCCSEEEEEEEEEE
T ss_pred --cCCCeEEEEEEECC
Confidence 35788999999854
No 165
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.58 E-value=7.5e-08 Score=95.78 Aligned_cols=69 Identities=17% Similarity=0.336 Sum_probs=59.3
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEec
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 276 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l~ 276 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.++.++. +.+.. . ++.+.++|.|+|+.++++++..
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~----------~~l~~-~-~~~v~l~v~R~g~~~~~~~~~~ 430 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMR----------KVLAA-K-PAIIALQIVRGNESIYLLMRLE 430 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHh-C-CCeEEEEEEECCEEEEEEEEec
Confidence 5899999999999999 99999999999999999998865 55554 3 3489999999999988887765
Q ss_pred cc
Q 017471 277 TH 278 (371)
Q Consensus 277 ~~ 278 (371)
..
T Consensus 431 ~~ 432 (436)
T 4a8c_A 431 HH 432 (436)
T ss_pred cc
Confidence 43
No 166
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.58 E-value=1.7e-07 Score=91.78 Aligned_cols=82 Identities=18% Similarity=0.238 Sum_probs=62.9
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+... . ....+++|.+|.++|||++ ||++||+|++|||++|.++. ++. ..+
T Consensus 85 ~giG~~~~~~-~----------~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~----------~~l 143 (388)
T 1fc6_A 85 TGVGLEITYD-G----------GSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVS----------DLL 143 (388)
T ss_dssp BBCSEEEEEC-T----------TCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHH----------HHH
T ss_pred EEEEEEEEEe-e----------cCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 3477777643 1 1246899999999999999 99999999999999999863 321 333
Q ss_pred hccCCCCEEEEEEEECCE---EEEEEEEec
Q 017471 250 SQKYTGDSAAVKVLRDSK---ILNFNITLA 276 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~---~~~~~v~l~ 276 (371)
+..+|++++++|.|+|+ .++++++..
T Consensus 144 -~~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 144 -QGEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp -CBSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred -hcCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 35679999999999998 666666544
No 167
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.58 E-value=6e-08 Score=102.35 Aligned_cols=116 Identities=15% Similarity=0.107 Sum_probs=81.9
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE--EEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI--LNFN 272 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~--~~~~ 272 (371)
..|++|..|.++|||++ | |++||+|++|||+++.++.... ....+ ..+|++++|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA--------AVEAL--KEAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHh--hccccccceEEEeccccccccee
Confidence 46899999999999999 9 9999999999999999886432 11222 34688999999999864 2355
Q ss_pred EEeccccccCCCCCCCCCCCceeeccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 273 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 273 v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
+++.... . -+|+.+... ... . .....|++|..+.++|||+..- ...+|.|
T Consensus 158 v~l~k~~----------~-----~lG~~i~~~~~~~----~-~~~~~gv~V~~V~~gs~A~~aG~L~~GD~I 209 (721)
T 2xkx_A 158 IKLIKGP----------K-----GLGFSIAGGVGNQ----H-IPGDNSIYVTKIIEGGAAHKDGRLQIGDKI 209 (721)
T ss_pred eeeeeec----------C-----CCceeeccCCCcc----c-cCCCCceEEEEeCCCCchhhcCCCCCCCEE
Confidence 5554210 0 156665432 111 0 1234789999999999998876 6667765
No 168
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=98.58 E-value=2.3e-08 Score=87.81 Aligned_cols=80 Identities=19% Similarity=0.142 Sum_probs=50.7
Q ss_pred EEEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEE
Q 017471 33 ATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQID 112 (371)
Q Consensus 33 ~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~d 112 (371)
..+.+|+..|+|++++.... ..+|.++++.....|...+..-+ -+..| +++.|
T Consensus 64 ~~~~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~a~~~~~~-------gv~~G------------------~i~~~ 116 (213)
T 3fan_A 64 QMLDFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGRAYWLTSS-------GVEPG------------------VIGNG 116 (213)
T ss_dssp EEEECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEEEEEEETT-------EEEEE------------------EEETT
T ss_pred EEEEecCCCcEEEEEccCcC--CCCCcceeeeeeccCceEEEEcc-------Ccccc------------------ccccC
Confidence 34577899999999996421 27899999864433311111100 11222 22333
Q ss_pred eec---cCCCCCCceecCCCcEEEEEeeec
Q 017471 113 AAI---NSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 113 a~i---~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
..+ ++|+|||||+|.+|+||||+.+.-
T Consensus 117 ~al~~T~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 117 FAFCFTACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEEESSCCCSTTCEEEETTSCEEEEEEC--
T ss_pred CEEEecCCCCCCCccCCCCCcEEEEEeccC
Confidence 333 799999999999999999998753
No 169
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.58 E-value=1.1e-08 Score=80.90 Aligned_cols=74 Identities=12% Similarity=0.139 Sum_probs=55.8
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.+|+.+..-. ....|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.
T Consensus 23 g~G~~~~~~~-----------~~~~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~- 82 (103)
T 1wfv_A 23 GFGFSIRGGR-----------EYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHAR--------AIELIK- 82 (103)
T ss_dssp SSSBCCEEET-----------TTTEEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHH--------HHHHHH-
T ss_pred cCCEEEeccc-----------cCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-
Confidence 3788776441 1234899999999999999 9 9999999999999999864321 112222
Q ss_pred cCCCCEEEEEEEECCEE
Q 017471 252 KYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~ 268 (371)
.+|++++|+|.|+++.
T Consensus 83 -~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 83 -SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp -HHCSEECEEEECTTCS
T ss_pred -cCCCeEEEEEEECCCC
Confidence 4688999999998863
No 170
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.57 E-value=2.1e-08 Score=79.87 Aligned_cols=59 Identities=17% Similarity=0.205 Sum_probs=47.6
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.+++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+. ..|+++.+++.|.+.+
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~----------~~l~--~~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVV----------DLIR--AGEKELILTVLSVESE 104 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH----------HHHH--HCSSEEEEEEECSSCC
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--cCCCEEEEEEEcCCCC
Confidence 3567999999999999 9999999999999999954 4432 3443 3589999999997653
No 171
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.57 E-value=2e-08 Score=82.83 Aligned_cols=80 Identities=14% Similarity=0.147 Sum_probs=58.9
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCC--Cccccccccchhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSY 247 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~ 247 (371)
...+|+.+....+. ... ...|++|.+|.++|||++ | |++||+|++|||+++.+.. ++. .
T Consensus 36 ~~glG~~i~~~~~~------~~~-~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~ 98 (127)
T 1wg6_A 36 SAGLGVSLKGNKSR------ETG-TDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAM----------E 98 (127)
T ss_dssp TTCCCCEEEEEEET------TTT-EEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHH----------H
T ss_pred CCccCeEEecccCC------CCC-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 34588888755111 011 135899999999999999 9 9999999999999998865 332 3
Q ss_pred hhhcc-----CCCCEEEEEEEECCEE
Q 017471 248 LVSQK-----YTGDSAAVKVLRDSKI 268 (371)
Q Consensus 248 ~~~~~-----~~g~~v~l~v~R~g~~ 268 (371)
.+... .++++|+|+|.|+++.
T Consensus 99 ~l~~~~~~~g~~~~~v~l~v~R~~~~ 124 (127)
T 1wg6_A 99 TLRRSMSMEGNIRGMIQLVILRRSGP 124 (127)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSCS
T ss_pred HHHHhhccccCCCCEEEEEEEeCCCC
Confidence 44433 3588999999998753
No 172
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.57 E-value=1.3e-08 Score=82.66 Aligned_cols=73 Identities=21% Similarity=0.326 Sum_probs=55.5
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~ 249 (371)
.+|+.+..... ....+++|.+|.++|||++ | |++||+|++|||+++.+ ..++. +.+
T Consensus 28 ~lG~~i~~~~~----------~~~~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~----------~~l 87 (117)
T 1v62_A 28 ALGISLTTTSL----------RNKSVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEAT----------KLL 87 (117)
T ss_dssp CCCCEEEEECC----------SSSCEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHH----------HHH
T ss_pred cccEEEEccCC----------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 47887765411 0123599999999999999 9 99999999999999954 44432 444
Q ss_pred hccCCCCEEEEEEEECCEE
Q 017471 250 SQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~g~~ 268 (371)
. ..|+.++|+|.|+++.
T Consensus 88 ~--~~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 88 A--SISEKVRLEILPVPQS 104 (117)
T ss_dssp H--SCSSEEEEEECCBTTB
T ss_pred H--hCCCeEEEEEEECCCC
Confidence 4 3789999999998764
No 173
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.56 E-value=6.8e-09 Score=84.54 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=49.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 269 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 269 (371)
..|++|.+|.++|||++ | |++||+|++|||++|.+..... +...+ +..++..+.+++.|+++.+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l-~~~~~~~~~l~v~R~~~~~ 106 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHD--------ALAIL-RQAREPRQAVIVTRKLTPE 106 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHH--------HHHHH-HHTTSSSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-HhCCCCeEEEEEEcCCCcc
Confidence 46899999999999999 9 9999999999999998643321 11223 3345666778999998754
No 174
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.56 E-value=1.8e-08 Score=81.51 Aligned_cols=61 Identities=21% Similarity=0.243 Sum_probs=48.6
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++|||++ | |++||+|++|||++|.++.... +...+. ..+++++|+|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEE--------AITALR--QTPQKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHH--------HHHHHH--TCCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEeCCcc
Confidence 5899999999999999 9 9999999999999998854211 112232 2458999999998875
No 175
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=3.8e-08 Score=76.20 Aligned_cols=61 Identities=21% Similarity=0.263 Sum_probs=47.0
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..+++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .+++++++|.|+++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEK--------AVELLKA--AQGSVKLVVRSGPS 91 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHH--------HHHHHHH--CCSEEEEEECCCCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEeCCC
Confidence 46899999999999998 7 9999999999999998753211 1123322 45789999998753
No 176
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.55 E-value=5.2e-08 Score=78.96 Aligned_cols=61 Identities=28% Similarity=0.368 Sum_probs=48.3
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+ ...|++++|+|.|.++
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~--~~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE--------AVEAI--KNAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH--------HHHHH--HTSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECCC
Confidence 46999999999999999 9 9999999999999998765322 11222 2368899999988654
No 177
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.55 E-value=4.6e-08 Score=97.73 Aligned_cols=64 Identities=17% Similarity=0.288 Sum_probs=56.4
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 273 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v 273 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.++.++. +.+.. .++.+.++|.|+|+.+.+.+
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~----------~~l~~--~~~~v~l~v~R~g~~~~v~l 450 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQ----------TIAQE--KKKELLVQVLRGPGSMYLLV 450 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHH----------HHTTS--SCSCEEEEEEETTEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHhc--CCCeEEEEEEECCEEEEEEe
Confidence 5899999999999999 99999999999999999988764 55544 67889999999999887765
No 178
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.55 E-value=7.4e-08 Score=74.19 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=52.7
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
..+|+.+..- .+ ...|++|.+|.++|||++ ||++||+|++|||+++.+..... ....+
T Consensus 16 ~~lG~~i~~~----------~~-~~~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~--------~~~~~- 75 (90)
T 1qav_A 16 GGLGISIKGG----------RE-NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQAL- 75 (90)
T ss_dssp TCCCEEEEEE----------GG-GTEEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHH--------HHHHH-
T ss_pred CCcCEEEEcc----------cC-CCCCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-
Confidence 3578877642 11 235899999999999996 79999999999999998764322 11122
Q ss_pred ccCCCCEEEEEEEEC
Q 017471 251 QKYTGDSAAVKVLRD 265 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~ 265 (371)
...+++++++|.|-
T Consensus 76 -~~~~~~v~l~v~r~ 89 (90)
T 1qav_A 76 -KKTGKEVVLEVKYM 89 (90)
T ss_dssp -HTCCSEEEEEEEEC
T ss_pred -HhCCCeEEEEEEEe
Confidence 23578899999883
No 179
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.54 E-value=3.8e-08 Score=79.85 Aligned_cols=62 Identities=21% Similarity=0.277 Sum_probs=48.8
Q ss_pred CCceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 197 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
..|++|.+|.++|||+.||++||+|++|||++|.+..... ....+. ..|+++.|+|.|+++.
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSF--------AVQQLR--KSGKIAAIVVKRPRKV 106 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHH--------HHHHHH--HSCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHH--------HHHHHh--cCCCeEEEEEEECCcc
Confidence 4689999999999996599999999999999998875432 112222 2689999999997653
No 180
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.54 E-value=6.1e-09 Score=85.80 Aligned_cols=59 Identities=17% Similarity=0.275 Sum_probs=49.0
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ ||++||+|++|||++|. +..++. ..+.. .|++++|+|.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVI----------ALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHH----------HHHHT--CTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCEEEEEEEECCC
Confidence 46899999999999999 99999999999999998 444432 34443 48999999999875
No 181
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.54 E-value=2.8e-08 Score=78.35 Aligned_cols=60 Identities=20% Similarity=0.236 Sum_probs=46.5
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
.+++|.+|.++|||++ ||++||+|++|||++|.++..-. +...+.. .+++++++|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHH--------HHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCC
Confidence 5789999999999999 99999999999999999653211 1133333 35679999999864
No 182
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.53 E-value=6.9e-08 Score=76.85 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=46.2
Q ss_pred CceEEEEECCCCcccc-C--CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCC--CCEEEEEEEEC
Q 017471 198 KGVRIRRVDPTAPESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT--GDSAAVKVLRD 265 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G--L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~--g~~v~l~v~R~ 265 (371)
.+++|.+|.++|||++ | |++||+|++|||++|.++.... ....+..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~--------~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH--------HHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCcEEEEEEEcC
Confidence 5799999999999999 9 9999999999999999875432 1123333221 35899999885
No 183
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=2e-08 Score=81.01 Aligned_cols=56 Identities=27% Similarity=0.415 Sum_probs=45.9
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 264 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R 264 (371)
.+++|..|.++|||++ ||++||+|++|||++|. ++.++. ..+. ...+++++++|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~----------~~i~-~~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVM----------KLLK-SFGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHH----------HHHH-HTTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH-hCCCceEEEEEEe
Confidence 4788999999999999 99999999999999999 666653 3443 3456778888877
No 184
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=8.1e-08 Score=76.56 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=47.7
Q ss_pred CCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ ||++||+|++|||+++.+..... ....+. ..++++.++|.|++.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQ--------AVEAFK--TAKEPIVVQVLRRTS 102 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHH--------HHHHHH--HCCSSEEEEEEECCS
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCcEEEEEEeCCC
Confidence 46899999999999987 79999999999999997654322 112222 367889999999753
No 185
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.51 E-value=4.2e-08 Score=86.11 Aligned_cols=62 Identities=15% Similarity=0.192 Sum_probs=50.9
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
..|++|.+|.++|||++ | |++||+|++|||++|.+ +.++. ..+. ..++.+.|+|.|+++...
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~--~~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAV----------AALK--NTYDVVYLKVAKPSNAET 194 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHH----------HHHH--SCCEEEEEEEEEESCCCE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHH----------HHHH--cCCCeEEEEEeCCCCccc
Confidence 35899999999999999 9 99999999999999988 44432 3443 358899999999987643
No 186
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.51 E-value=5e-08 Score=76.90 Aligned_cols=60 Identities=10% Similarity=0.136 Sum_probs=47.0
Q ss_pred CceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.+++|.+|.++|||++ ||++||+|++|||+++.+. ... ....+ ...+++++|+|.|+++.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~--------~~~~~--~~~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQE--------ALILI--KGSFRILKLIVRRRNSG 96 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHH--------HHHHH--HTCCSSCEEEEEECCCS
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHH--------HHHHH--HhCCCeEEEEEEeCCCC
Confidence 4799999999999987 7999999999999999885 211 01222 23478899999999863
No 187
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=3.4e-08 Score=79.29 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=55.4
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCC--Cccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~ 249 (371)
-+|+.+..-.+ .. ...+++|.+|.++|||++ | |++||+|++|||+++.+.. ++. ..+
T Consensus 26 glG~~i~gg~~--------~~-~~~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~----------~~l 86 (109)
T 1wi4_A 26 GLGLKILGGIN--------RN-EGPLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAK----------SII 86 (109)
T ss_dssp CCCEEEEECSS--------SS-SCSSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHH----------HHH
T ss_pred ccCEEEEeccC--------CC-CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 37888764311 00 124799999999999999 9 9999999999999998743 322 344
Q ss_pred hccC--CCCEEEEEEEECCE
Q 017471 250 SQKY--TGDSAAVKVLRDSK 267 (371)
Q Consensus 250 ~~~~--~g~~v~l~v~R~g~ 267 (371)
.... .+.++++++.|+++
T Consensus 87 ~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 87 TRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp HHSCCSSSSCEEEEEECCCC
T ss_pred HccccCCCceEEEEEEeCCC
Confidence 4332 48899999999875
No 188
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.50 E-value=6e-08 Score=95.09 Aligned_cols=71 Identities=15% Similarity=0.261 Sum_probs=57.1
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~ 250 (371)
.+|+.+..- ...|++|.+|.++|||++ ||++||+|++|||+++.+. .++. ..+.
T Consensus 20 ~lG~~i~gg-------------~~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~----------~~l~ 76 (391)
T 3tsz_A 20 SVGLRLAGG-------------NDVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLL 76 (391)
T ss_dssp SCCEEEEEE-------------TTTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHH
T ss_pred ceeEEEEec-------------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH
Confidence 488887643 236999999999999999 9999999999999999873 3332 4444
Q ss_pred ccCCCCEEEEEEEECCE
Q 017471 251 QKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~ 267 (371)
...+|++++++|.|+++
T Consensus 77 ~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 77 DLPKGEEVTILAQKKKD 93 (391)
T ss_dssp HSCTTSEEEEEEEECHH
T ss_pred hhcCCCeEEEEEeeCCc
Confidence 44689999999999863
No 189
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.50 E-value=9.3e-08 Score=79.41 Aligned_cols=61 Identities=16% Similarity=0.235 Sum_probs=48.0
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.+..... ....+. ..|+++.|+|.|.++.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ--------VVNMIR--QGGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH--------HHHHHH--HTTTEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCEEEEEEEECCCC
Confidence 4899999999999999 99999999999999998654321 112332 2688999999987654
No 190
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=5.7e-08 Score=78.43 Aligned_cols=58 Identities=24% Similarity=0.400 Sum_probs=49.0
Q ss_pred ceEEEEECCCCcccc--CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 199 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 199 gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
+++|.+|.++|||++ ||++||+|++|||++|.+. .++. .++.. +|+++.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIV----------KLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHH----------HHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEeCCcC
Confidence 679999999999997 8999999999999999885 4433 45543 789999999998864
No 191
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.49 E-value=6.9e-08 Score=85.29 Aligned_cols=58 Identities=21% Similarity=0.204 Sum_probs=48.5
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ ||++||+|++|||++|.+. .++. ..+ ..|+.+.++|.|+|+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~----------~~l---~~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVI----------NLI---RTEKTVSIKVRHIGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHH---TSSSEEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHH---cCCCeEEEEEEECCc
Confidence 35899999999999999 9999999999999999883 3321 222 238999999999998
No 192
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.49 E-value=1.4e-07 Score=76.21 Aligned_cols=71 Identities=14% Similarity=0.129 Sum_probs=51.9
Q ss_pred ccccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEe--cCCCCccccccccchhhh
Q 017471 172 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSY 247 (371)
Q Consensus 172 ~~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V--~~~~~l~~~~~~~~~~~~ 247 (371)
.+.+|+.+..-.. ...+++|.+|.++|||++ | |++||+|++|||+++ .++.++. .
T Consensus 35 ~~~lG~~l~~~~~-----------~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~----------~ 93 (114)
T 2gzv_A 35 QNLIGISIGGGAQ-----------YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVA----------K 93 (114)
T ss_dssp TSCCSEEEEECCC-------------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------H
T ss_pred CCcEeEEEEeCCC-----------CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------H
Confidence 3568998875411 125799999999999999 9 999999999999999 5555543 3
Q ss_pred hhhccCCCCEEEEEEEEC
Q 017471 248 LVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 248 ~~~~~~~g~~v~l~v~R~ 265 (371)
.+.. .+++++++|.+.
T Consensus 94 ~l~~--~~~~v~l~v~~~ 109 (114)
T 2gzv_A 94 MIQE--VKGEVTIHYNKL 109 (114)
T ss_dssp HHHH--CCSEEEEEEECC
T ss_pred HHHc--CCCeEEEEEEec
Confidence 4433 345688887653
No 193
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.48 E-value=6e-08 Score=85.96 Aligned_cols=62 Identities=27% Similarity=0.465 Sum_probs=51.9
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
..|++|.+|.++|||++ | |++||+|++|||++|. +..++. ..+.. +++.+.++|.|+++.++
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~----------~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAM----------SILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEEECCccCC
Confidence 36899999999999999 9 9999999999999999 666653 45544 78999999999987653
No 194
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=3.8e-08 Score=79.07 Aligned_cols=61 Identities=20% Similarity=0.282 Sum_probs=48.7
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.++.... ....+ ...++++.++|.|+++
T Consensus 38 ~~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 38 GEGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ--------AAAAL--KRAGQSVTIVAQYRPE 100 (113)
T ss_dssp TCCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHH--------HHHHH--HSCCSEEEEEEECCHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HhCCCcEEEEEEECcc
Confidence 36899999999999999 9 9999999999999999875322 11222 2468899999999764
No 195
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.47 E-value=3e-08 Score=76.35 Aligned_cols=57 Identities=23% Similarity=0.310 Sum_probs=43.7
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|.+|.++|||++ | |++||+|++|||+++.+. .++. ..+.. .+.++.|++.+.-
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~----------~~i~~--~~~~v~L~v~~~~ 81 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDAR----------KLIEK--SRGKLQLVVLRDL 81 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH----------HHHHH--TTTEEEEEECCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHc--CCCeEEEEEeCCC
Confidence 4899999999999999 9 999999999999999543 3332 34433 3457888877643
No 196
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.46 E-value=5.8e-08 Score=77.61 Aligned_cols=74 Identities=14% Similarity=0.189 Sum_probs=53.4
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCC--Cccccccccchhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 249 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~ 249 (371)
-+|+.+..-.++ ......|++|.+|.++|||++ | |++||+|++|||+++.+.. ++. ..+
T Consensus 27 glG~~i~~~~~~-------~~~~~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l 89 (108)
T 2d92_A 27 GLGFSILDYQDP-------LDPTRSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAV----------EIL 89 (108)
T ss_dssp CCSEEEEEEECS-------SCTTCEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHH----------HHH
T ss_pred ccCEEEeccccc-------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHH
Confidence 478877643110 111246899999999999999 9 9999999999999997643 322 233
Q ss_pred hccCCCCEEEEEEEEC
Q 017471 250 SQKYTGDSAAVKVLRD 265 (371)
Q Consensus 250 ~~~~~g~~v~l~v~R~ 265 (371)
. ..++++++|+|.|.
T Consensus 90 ~-~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 90 K-AVPPGLVHLGICSG 104 (108)
T ss_dssp H-HSCSEEEEEEEECC
T ss_pred H-hCCCCeEEEEEEcC
Confidence 3 33566899999885
No 197
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=3.3e-08 Score=79.38 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=48.1
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..|++|.+|.++|||++ | |++||+|++|||+++.+..... +...+ ...+++++|+|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l--~~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGE--------AVQLL--RSVGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHH--------HHHHH--SSCSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECCC
Confidence 46899999999999999 9 9999999999999998643221 11222 2368899999998754
No 198
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.44 E-value=5.1e-07 Score=72.81 Aligned_cols=61 Identities=18% Similarity=0.164 Sum_probs=48.0
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--CccccccccchhhhhhhccCCCCEEEEEEEECCEEEE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 270 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~ 270 (371)
.|..|.+|.+ |++. ||++||+|++|||++|.+.. ++. ..+.....|++++|+|.|+|....
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv----------~~lk~~~~G~~v~L~V~R~g~~~p 97 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVV----------EVLKQFPVGADVPLLILRGGPPSP 97 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHH----------HHHHHSCTTCEEEEEEEESSCC--
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHcCCCCCEEEEEEEECCccCc
Confidence 3667888887 5667 99999999999999999765 433 566656679999999999986543
No 199
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.43 E-value=1e-07 Score=77.15 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=51.7
Q ss_pred cceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhhhc
Q 017471 175 LGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 175 lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~ 251 (371)
+|+.+..+ ++. ...|++|.+|.++|||++ ||++||+|++|||++|.++. ++. ..+.
T Consensus 31 ~G~~v~~~-~~~---------~~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~----------~~l~- 89 (114)
T 2d8i_A 31 YGFSLSSV-EED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLK----------DFLS- 89 (114)
T ss_dssp CCCEEEEE-EET---------TEEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHH----------HHHT-
T ss_pred cCEEEEec-CcC---------CcCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHH----------HHHh-
Confidence 68888866 221 125899999999999999 99999999999999999864 321 2332
Q ss_pred cCCCCEEEEEEEECC
Q 017471 252 KYTGDSAAVKVLRDS 266 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g 266 (371)
++.+.|+|.|..
T Consensus 90 ---~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 ---QPSLGLLVRTYP 101 (114)
T ss_dssp ---SSEEEEEEEECC
T ss_pred ---CCcEEEEEEECC
Confidence 347888888864
No 200
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.43 E-value=3.1e-07 Score=75.31 Aligned_cols=59 Identities=14% Similarity=0.150 Sum_probs=45.4
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
..+++|.+|.++|||++ | |++||+|++|||+++.+..... +...+.. .+++++++|.|.
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r~ 104 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE--------VAKMIQE--VKGEVTIHYNKL 104 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEEC
Confidence 35899999999999999 9 9999999999999998543211 1133333 456799999883
No 201
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.42 E-value=9.5e-09 Score=92.65 Aligned_cols=67 Identities=25% Similarity=0.431 Sum_probs=54.4
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhhccCCCCEE-EEEEEECCEEE--EE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSA-AVKVLRDSKIL--NF 271 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~~~~~g~~v-~l~v~R~g~~~--~~ 271 (371)
.|++|..|.++|||++ ||++||+|++|||++|. ++.++. ..+... |+++ .++|.|+|+.. ++
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~----------~~l~~~--g~~v~~l~V~R~g~~~~~~v 100 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVV----------SAIRAG--GDETKLLVVDRETDEFFKKC 100 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHH----------HHHHHH--CSEEEEEECCHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhc--CCeEEEEEEEECCEEEEEEE
Confidence 4899999999999999 99999999999999999 666543 444443 8889 99999999876 45
Q ss_pred EEEec
Q 017471 272 NITLA 276 (371)
Q Consensus 272 ~v~l~ 276 (371)
++++.
T Consensus 101 ~v~p~ 105 (216)
T 2krg_A 101 RVIPS 105 (216)
T ss_dssp TCCCC
T ss_pred EEEEe
Confidence 55443
No 202
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.40 E-value=5.6e-08 Score=77.08 Aligned_cols=73 Identities=16% Similarity=0.256 Sum_probs=51.1
Q ss_pred ccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEec--CCCCccccccccchhhhhhh
Q 017471 174 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 174 ~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~--~~~~l~~~~~~~~~~~~~~~ 250 (371)
-+|+.+... ..+.+.. .....+++|.+|.++|||++ ||++||+|++|||++|. +..++. +.+.
T Consensus 28 ~~G~~l~~~-~~~~~~~---~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~----------~~l~ 93 (104)
T 2z17_A 28 TFGFEIQSY-RPQNQNA---CSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVV----------DLIR 93 (104)
T ss_dssp CCSEEEEEC-CCCCCSS---SCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHH----------HHHH
T ss_pred CccEEEEee-ecccCCc---ccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHH----------HHHH
Confidence 368888764 2111100 11246899999999999999 99999999999999998 445543 4454
Q ss_pred ccCCCCEEEEEE
Q 017471 251 QKYTGDSAAVKV 262 (371)
Q Consensus 251 ~~~~g~~v~l~v 262 (371)
.. . ++++++|
T Consensus 94 ~~-~-~~v~l~v 103 (104)
T 2z17_A 94 SS-G-NLLTIET 103 (104)
T ss_dssp HT-T-TEEEEEC
T ss_pred hC-C-CcEEEEE
Confidence 43 3 4777765
No 203
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.38 E-value=1.6e-07 Score=93.67 Aligned_cols=60 Identities=17% Similarity=0.274 Sum_probs=51.3
Q ss_pred CceEEEEECCCCcccc-CCCCCCEEEEECCEEecCC--CCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 198 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.+. .++. ..+....+|++++|+|.|+++
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~----------~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAV----------LFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHH----------HHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHHhcCCCCEEEEEEEECCc
Confidence 6899999999999999 9999999999999999873 3432 455555689999999999764
No 204
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.38 E-value=2.6e-07 Score=70.55 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=44.0
Q ss_pred CceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEE
Q 017471 198 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 264 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R 264 (371)
.+++|.+|.++|||++ ||++||+|++|||+++.+..... ....+. .++++++++|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEE
Confidence 5799999999999996 89999999999999998764321 112332 367788888764
No 205
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.38 E-value=4.2e-07 Score=80.64 Aligned_cols=59 Identities=20% Similarity=0.154 Sum_probs=46.9
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.|++|.+|.++|||++ | |++||+|++|||++|.++.... +...+ ...++++.|+|.|..
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l--~~~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV--------CYALF--KGANGKVSMEVTRPK 196 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH--------HHHHH--HTCCSEEEEEEEEEC
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCC
Confidence 5899999999999999 8 9999999999999999864321 11233 235778999999943
No 206
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=7.6e-08 Score=78.29 Aligned_cols=57 Identities=14% Similarity=0.095 Sum_probs=45.7
Q ss_pred ceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCC--Cccccccccchhhhhhhcc--CCCCEEEEEEEEC
Q 017471 199 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQK--YTGDSAAVKVLRD 265 (371)
Q Consensus 199 gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~--~l~~~~~~~~~~~~~~~~~--~~g~~v~l~v~R~ 265 (371)
.++|.+|.++|||++ ||++||+|++|||+++.+.. ++. ..+... ..|++++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~----------~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAE----------AALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHH----------HHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHHhhhcCCCeEEEEEEeC
Confidence 499999999999997 79999999999999998754 322 334332 1489999999995
No 207
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.35 E-value=1.2e-06 Score=92.45 Aligned_cols=65 Identities=15% Similarity=0.127 Sum_probs=52.0
Q ss_pred CCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNF 271 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~ 271 (371)
..|++|.+|.++|||++ | |++||+|++|||++|.++.... +...+ ...|+.+.++|.|+|+....
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~~~~v~l~V~R~g~~~~~ 249 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED--------AVAAL--KNTYDVVYLKVAKPSNAYLS 249 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCccccc
Confidence 46999999999999999 9 9999999999999999875322 11222 23578999999999986543
No 208
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.35 E-value=3.6e-07 Score=79.22 Aligned_cols=78 Identities=14% Similarity=0.211 Sum_probs=54.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
.-+|+.+....... .. .....|++|.+|.++|||++ | |++||+|++|||+++.+..... ....+.
T Consensus 91 ~glG~~i~g~~~g~---~~--~~~~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~--------~~~~l~ 157 (170)
T 3egg_C 91 EGLGISIIGMGAGA---DM--GLEKLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLR 157 (170)
T ss_dssp TBSSEEEEEECSSS---SC--CSSSBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHH--------HHHHHH
T ss_pred CeEeEEEEecccCC---cc--ccCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 34888877620000 00 11246899999999999999 9 9999999999999997654321 112333
Q ss_pred ccCCCCEEEEEEEEC
Q 017471 251 QKYTGDSAAVKVLRD 265 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~ 265 (371)
. .|+++.|+|.|+
T Consensus 158 ~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 158 N--TKGRVRFMIGRE 170 (170)
T ss_dssp H--CCSEEEEEEEEC
T ss_pred c--CCCEEEEEEEeC
Confidence 2 678999999995
No 209
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.33 E-value=4.5e-07 Score=89.12 Aligned_cols=57 Identities=19% Similarity=0.207 Sum_probs=48.5
Q ss_pred ceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 199 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 199 gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
.++|..|.++|||++ |||+||+|++|||++|.++. +. ..+. . +|+++++++.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~----------~~l~-~-~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ES----------ELLQ-G-STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GG----------GGTS-C-SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HH----------HHhh-C-CCCEEEEEEEeCCcc
Confidence 478999999999999 99999999999999999875 43 3443 3 899999999998864
No 210
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.33 E-value=1.6e-07 Score=82.98 Aligned_cols=73 Identities=16% Similarity=0.197 Sum_probs=57.4
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc-C-CCCCCEEEEECCEEecC--CCCccccccccchhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 248 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~ 248 (371)
..+|+.+... +.. . ...|++|.+|.++|||++ | |++||+|++|||+++.+ +.++. +.
T Consensus 119 ~~lG~~~~~~-~~~------~--~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~----------~~ 179 (196)
T 1p1d_A 119 VELGITISSP-SSR------K--PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAV----------QI 179 (196)
T ss_dssp CCCCCEEECS-CSS------S--TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHH----------HH
T ss_pred CCcCEEEECC-CCC------C--CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHH----------HH
Confidence 3578887755 221 0 136899999999999999 9 99999999999999998 55543 55
Q ss_pred hhccCCCCEEEEEEEECC
Q 017471 249 VSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 249 ~~~~~~g~~v~l~v~R~g 266 (371)
+... ++.+.++|.|++
T Consensus 180 l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 180 LQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp HHHC--TTCEEEEEECCC
T ss_pred HHhC--CCEEEEEEEeCC
Confidence 5543 889999999986
No 211
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=1.5e-07 Score=76.50 Aligned_cols=77 Identities=17% Similarity=0.210 Sum_probs=53.9
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc---CCCCCCEEEEECCEEecCCCCccccccccchhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE---VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 249 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~---GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~ 249 (371)
..+|+.+..-. . ...+++|.+|.++|||++ ||++||+|++|||++|.+..... ....+
T Consensus 27 ~~~G~~l~gg~----------~-~~~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~--------~~~~~ 87 (119)
T 2cs5_A 27 GRFGFNVKGGY----------D-QKMPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFI 87 (119)
T ss_dssp SCCSEEEEEEG----------G-GTEEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHH--------HHHHH
T ss_pred CCcCEEEeccc----------C-CCCCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHH--------HHHHH
Confidence 45788876431 0 135799999999999987 89999999999999998764321 11222
Q ss_pred hccC--CCCEEEEEEEECCEE
Q 017471 250 SQKY--TGDSAAVKVLRDSKI 268 (371)
Q Consensus 250 ~~~~--~g~~v~l~v~R~g~~ 268 (371)
.... .+.++.|+|.|+...
T Consensus 88 ~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 88 KASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp HHHHHCCSSCEEEEEECCCCC
T ss_pred HhccccCCCEEEEEEEccccc
Confidence 2221 135899999998644
No 212
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.29 E-value=3e-07 Score=76.02 Aligned_cols=62 Identities=18% Similarity=0.271 Sum_probs=47.3
Q ss_pred CCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCE
Q 017471 197 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 267 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~ 267 (371)
..+++|.+|.++|||++ ||++||+|++|||+++.+...-. ....+ +...+..+.++|.|++.
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~--------~~~~l-~~~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFE--------AWNII-KALPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHH--------HHHHH-HTSCSSEEEEEEEEESS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH-HhCCCceEEEEEEeCCC
Confidence 35799999999999997 79999999999999998753211 11223 33456789999999754
No 213
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.28 E-value=6.3e-07 Score=70.89 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=52.6
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
.-+|+.+..-.+ ...+++|.+|.++|||++ ||++||+|++|||+++.+..... ....+.
T Consensus 21 ~~lG~~l~~g~~-----------~~~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~--------~~~~l~ 81 (103)
T 2dc2_A 21 EGLGISITGGKE-----------HGVPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILS 81 (103)
T ss_dssp SCCCEEEEEEGG-----------GTEEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHH--------HHHHHH
T ss_pred CccCEEEEeccC-----------CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 347887764310 135899999999999997 89999999999999998753221 112222
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
..+++++|++.|....
T Consensus 82 --~~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 82 --QQRGEIEFEVVYVALE 97 (103)
T ss_dssp --HCCSEEEEEEEECC--
T ss_pred --hCCCcEEEEEEecCCc
Confidence 2456899999997643
No 214
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.23 E-value=1.1e-06 Score=66.82 Aligned_cols=53 Identities=9% Similarity=0.191 Sum_probs=41.9
Q ss_pred EEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEE
Q 017471 202 IRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 264 (371)
Q Consensus 202 V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R 264 (371)
|.++.++|||++ ||++||+|++|||+.+.....-+ ...++ + ..|.+++|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~e--------vv~ll-r-~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQ--------IADIL-S-TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHH-H-HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHH--------HHHHH-h-cCCCEEEEEEEe
Confidence 789999999999 99999999999999998765321 11233 3 578899998864
No 215
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.22 E-value=3.1e-07 Score=72.82 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=46.3
Q ss_pred ceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCC--CCccccccccchhhhhhhc---cCCCCEEEEEEEECCE
Q 017471 199 GVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQ---KYTGDSAAVKVLRDSK 267 (371)
Q Consensus 199 gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~--~~l~~~~~~~~~~~~~~~~---~~~g~~v~l~v~R~g~ 267 (371)
+++|.+|.+++||++ | |++||.|++|||+++.+. .++. ..+.. ...++.+++.|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~----------~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAA----------RIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHH----------HHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHH----------HHHHHhcccCCCCeEEEEEEEccc
Confidence 458999999999999 9 999999999999999763 3332 23332 2357889999999764
No 216
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.20 E-value=1.8e-07 Score=93.30 Aligned_cols=65 Identities=17% Similarity=0.309 Sum_probs=0.0
Q ss_pred CCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEE
Q 017471 197 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 273 (371)
Q Consensus 197 ~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v 273 (371)
..|++|.+|.++|||++ ||++||+|++|||++|.++.++. +.+.. .++ .+.++|.|+|+.+++++
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~----------~~l~~-~~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELR----------KVLDS-KPS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHc-CCC-eEEEEEEECCEEEEEEe
Confidence 36899999999999999 99999999999999999999875 45543 344 89999999998876654
No 217
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.51 E-value=1.9e-07 Score=75.34 Aligned_cols=38 Identities=21% Similarity=0.448 Sum_probs=33.4
Q ss_pred CceEEEEECCCCcccc--CCCCCCEEEEECCEEecC--CCCc
Q 017471 198 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAN--DGTV 235 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~--~~~l 235 (371)
.|++|.+|.++|||++ ||++||+|++|||++|.+ ..++
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~ 94 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEA 94 (112)
Confidence 4799999999999997 899999999999999954 4444
No 218
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.11 E-value=6.9e-06 Score=63.88 Aligned_cols=60 Identities=13% Similarity=0.078 Sum_probs=49.1
Q ss_pred CceEEEEECCCCcccc-C-CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 198 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 198 ~gv~V~~V~~~spA~~-G-L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
..++|.+|.++|+|++ | |++||.|++|||+.+..+...+ ..+++.....|.+++|.+.+-
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~e--------vv~lLk~~~~g~~~~L~lv~p 89 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD--------VAKKLKELKKEELFTMKLIEP 89 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHHSCTTCEEEEEEEEE
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhCCCCCEEEEEEECc
Confidence 3578999999999998 5 9999999999999998875432 235666677889999988774
No 219
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.06 E-value=8.8e-06 Score=88.85 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=55.2
Q ss_pred CceEEEEECCC--------Ccccc-C--CCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECC
Q 017471 198 KGVRIRRVDPT--------APESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 266 (371)
Q Consensus 198 ~gv~V~~V~~~--------spA~~-G--L~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g 266 (371)
.+++|.+|.++ |||++ | |+ ||+|++|||+++.+..++. ..+ ...+|++++|+|.|+|
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~----------~~~-~~~~g~~v~l~v~r~~ 815 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIY----------RVL-SEKAGTSARIRLSGKG 815 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHH----------HHH-HTTTTSEEEEEEECSS
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHH----------Hhh-cCCCCCEEEEEEECCC
Confidence 57999999988 99999 9 99 9999999999999887754 344 4478999999999987
Q ss_pred -EEEEEEEEe
Q 017471 267 -KILNFNITL 275 (371)
Q Consensus 267 -~~~~~~v~l 275 (371)
+.++++++.
T Consensus 816 ~~~~~~~~~~ 825 (1045)
T 1k32_A 816 GDKRDLMIDI 825 (1045)
T ss_dssp SCEEEEEEEC
T ss_pred CceEEEEEEE
Confidence 555666664
No 220
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.95 E-value=2.1e-06 Score=79.42 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=55.8
Q ss_pred cccceeeeEcCCHHHHHhccCCCCCCceEEEEECCCCcccc--CCCCCCEEEEECCEEecCCCCccccccccchhhhhhh
Q 017471 173 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 250 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~~~~~gv~V~~V~~~spA~~--GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~ 250 (371)
.-+|+.+..- .. ...|++|.+|.++|||++ ||++||+|++|||++|.+....+ ....+.
T Consensus 89 ~glGf~I~gg----------~d-~~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e--------~v~~l~ 149 (263)
T 1z87_A 89 GGLGISIKGG----------RE-NKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALK 149 (263)
T ss_dssp CCCCCEEEEE----------TT-TTEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHH--------HHHHHH
T ss_pred CCEeEEEeec----------cC-CCCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHH--------HHHHHh
Confidence 3478887643 11 236899999999999997 89999999999999999864322 112332
Q ss_pred ccCCCCEEEEEEEECCEE
Q 017471 251 QKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 251 ~~~~g~~v~l~v~R~g~~ 268 (371)
. .|++++|+|.|.++.
T Consensus 150 ~--~g~~V~L~V~R~~~~ 165 (263)
T 1z87_A 150 K--TGKEVVLEVKYMKEV 165 (263)
T ss_dssp H--CCSCCCEEEECCSSS
T ss_pred c--CCCeEEEEEEeCccc
Confidence 2 478899999997754
No 221
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.90 E-value=1.1e-06 Score=75.46 Aligned_cols=54 Identities=11% Similarity=0.136 Sum_probs=42.0
Q ss_pred EEEEECCCCcccc-CCCCCCEEEEECCEEecCCCCccccccccchhhhhhhccCCCCEEEEEEEECCEEEEEEEEe
Q 017471 201 RIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 275 (371)
Q Consensus 201 ~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 275 (371)
+|.+|.++|||++ ||++||+|++|||+++.++. ++++.+++.|+|+..++.+++
T Consensus 110 ~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~---------------------~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK---------------------DSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCC---------------------HHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCC---------------------hHHHHHHHhhCCCEEEEEEEE
Confidence 7999999999999 99999999999999998763 223344555666666666554
No 222
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.86 E-value=2.5e-05 Score=79.21 Aligned_cols=83 Identities=14% Similarity=0.142 Sum_probs=63.8
Q ss_pred cccceeeeEcCCHHHHHhccCC-----------------CCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecCCCC
Q 017471 173 PLLGVEWQKMENPDLRVAMSMK-----------------ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGT 234 (371)
Q Consensus 173 ~~lGi~~~~~~~~~~~~~~gl~-----------------~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~~~~ 234 (371)
.+.|+.++++ ++++.+.++.. ...+||+|++|.++++|+. |+++||+|++|||++|++..+
T Consensus 374 ~~~Gl~f~~L-t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~ 452 (539)
T 4fln_A 374 IVAGLVFTPL-SEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHH 452 (539)
T ss_dssp CSTTEEEEEC-CHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHH
T ss_pred cccceEEeeC-CHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHH
Confidence 3579999999 77766554332 1346899999999999999 999999999999999999998
Q ss_pred ccccccccchhhhhhhccCCCCEEEEEEEECCEE
Q 017471 235 VPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 268 (371)
Q Consensus 235 l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 268 (371)
+. +++.+ ..++.+.+... +++.
T Consensus 453 l~----------~~l~~-~k~~~l~~~~~-~~~~ 474 (539)
T 4fln_A 453 LA----------HLIDM-CKDKYLVFEFE-DNYV 474 (539)
T ss_dssp HH----------HHHHT-CCSSEEEEEET-TSCE
T ss_pred HH----------HHHHH-cCCCeEEEEEC-CCEE
Confidence 75 55554 45677776643 4544
No 223
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=97.83 E-value=3.6e-05 Score=67.64 Aligned_cols=112 Identities=15% Similarity=0.228 Sum_probs=71.7
Q ss_pred EEEEEecCCCCEEEEEEecCCCcC--CccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEE
Q 017471 32 SATLVTADICIYTMLTVEDDEFWE--GVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGL 109 (371)
Q Consensus 32 A~vv~~d~~~DlAlLkv~~~~~~~--~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i 109 (371)
..+...|+..|+|++++.+.. +. ....+.|.+ ...++.|.++|+|..... ....|+.... ... ..+
T Consensus 72 ~~~~~~d~~~D~all~vp~~~-~s~lg~~~a~~~~-~~~~~~vt~yg~~~~~~~-~s~~g~~~~~------~~~---~~~ 139 (191)
T 1zyo_A 72 ISMSSSDKMLDFAIVRVPTHV-WSKLGVKSTPLVC-PSSKDVITCYGGSSSDCL-MSGVGSSSTS------EFT---WKL 139 (191)
T ss_dssp EEEEECCTTTCEEEEECCHHH-HHHHTCCCCCBCC-CCSCEEEEEEEESSTTSE-EEEEEEEEEC------SST---TEE
T ss_pred eeEccCCCCCcEEEEEcCCCh-hhhcCcceeEeec-CCCCccEEEEeecCCCCE-eecccceeec------cCC---cEE
Confidence 444455778999999998642 10 234444533 234789999999865443 3334422111 111 257
Q ss_pred EEEeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHh
Q 017471 110 QIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHF 159 (371)
Q Consensus 110 ~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~ 159 (371)
+++++..+|.||.|++|.+ .||||....- ...+.+.++-+..++.+
T Consensus 140 ~~~~~T~~G~SGsP~~ng~-~IVGvh~G~~---~~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 140 THTCPTAAGWSGTPLYSSR-GVVGMHVGFE---EIGKLNRGVNMFYVANY 185 (191)
T ss_dssp EECCCCCTTCTTCEEECSS-CEEEEEEEEE---ETTTEEEEECHHHHHHH
T ss_pred EEEcCCCCCCCCCcEEcCC-eEEEEEeCcc---cCCceeeeeehHHHhhh
Confidence 8999999999999999975 8889987743 22455666666655554
No 224
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=97.50 E-value=0.00026 Score=62.74 Aligned_cols=89 Identities=17% Similarity=0.203 Sum_probs=55.4
Q ss_pred CCCEEEEEEecCCCcCCccceecCCCC-CCCCeEEEEEeCCCCC------CceeeeeEEeeeeeeeccCCCeEEeEEEEE
Q 017471 40 ICIYTMLTVEDDEFWEGVLPVEFGELP-ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGLQID 112 (371)
Q Consensus 40 ~~DlAlLkv~~~~~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~------~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~d 112 (371)
.+|+||||++.+ +.+.+.|+.+.... ..++.+.+.|++.... ...+...+++.... . ...-+
T Consensus 95 ~~DiAll~L~~~-~~~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c-------~---~~~~~ 163 (215)
T 1p3c_A 95 QYDFAVIKTDTN-IGNTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDT-------N---LAYYT 163 (215)
T ss_dssp GGCCEEEEESSC-HHHHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECS-------S---EEEEC
T ss_pred ccCEEEEEECCC-CcccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccc-------h---heeec
Confidence 369999999974 33345666665543 4679999999973210 11222222222110 0 01124
Q ss_pred eeccCCCCCCceecCCCcEEEEEeeec
Q 017471 113 AAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 113 a~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
...-.|+|||||+..+|.++||++...
T Consensus 164 ~~~C~GDSGgPl~~~~g~lvGi~S~g~ 190 (215)
T 1p3c_A 164 IDTFSGNSGSAMLDQNQQIVGVHNAGY 190 (215)
T ss_dssp CCCCTTCTTCEEECTTSCEEEECCEEE
T ss_pred cccCCCCCCCeeEccCCeEEEEEeccc
Confidence 556789999999988899999986543
No 225
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=97.35 E-value=0.0018 Score=58.28 Aligned_cols=114 Identities=15% Similarity=0.172 Sum_probs=73.2
Q ss_pred cCCCCEEEEEEecCCCcCCccceecC---CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEee
Q 017471 38 ADICIYTMLTVEDDEFWEGVLPVEFG---ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAA 114 (371)
Q Consensus 38 d~~~DlAlLkv~~~~~~~~l~~~~l~---~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~ 114 (371)
-+..|+.++|... ++||.+-. ..|..+|.|..+|..+.... ....||.........+. .+..+-.+
T Consensus 77 i~g~DiiiIrmPk-----DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~---~~s~vSesS~i~p~~~~---~fWkHwIs 145 (241)
T 3mmg_A 77 VEGRDIIVIKMAK-----DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKS---VSSLVSESSHIVHKEDT---SFWQHWIT 145 (241)
T ss_dssp CTBSSCEEEECCT-----TSCCCCSCCCBCCCCTTCCEEEEEEEECSSC---EEEEEEEEECCEECTTS---SEEEECBC
T ss_pred eCCccEEEEeCCC-----CCCCcchhcccCCCCCCCeEEEEEeecccCC---ccEEECCcceeEEcCCC---CEEEEEcC
Confidence 3468999999944 45555432 45678899999998776433 22234433211111221 36777888
Q ss_pred ccCCCCCCceecC-CCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 115 INSGNSGGPAFND-KGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 115 i~~G~SGGPlvn~-~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
...|+-|+|+++. +|.+|||...... .+..|+.-++|-+...++++..
T Consensus 146 T~~G~CGlPlVs~~Dg~IVGiHsl~~~-~~~~N~F~~f~~~f~~~~L~~~ 194 (241)
T 3mmg_A 146 TKDGQAGSPLVSIIDGNILGIHSLTHT-TNGSNYFVEFPEKFVATYLDAA 194 (241)
T ss_dssp CCTTCTTCEEEETTTCCEEEEEEEEET-TTCCEEEEECCTTHHHHHTTCS
T ss_pred CCCCcCCCeEEEcCCCcEEEEEecccC-CCCcEEEEcCCHHHHHHHhhCc
Confidence 8999999999985 7999999876542 2334555556656666666664
No 226
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=97.31 E-value=0.0019 Score=57.56 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=60.0
Q ss_pred EeEEEEEecCC-----CCEEEEEEecCC-CcCCccceecCC--C-CCCCCeEEEEEeCCCCCC-----ceeeeeEEeeee
Q 017471 30 APSATLVTADI-----CIYTMLTVEDDE-FWEGVLPVEFGE--L-PALQDAVTVVGYPIGGDT-----ISVTSGVVSRIE 95 (371)
Q Consensus 30 ~~A~vv~~d~~-----~DlAlLkv~~~~-~~~~l~~~~l~~--s-~~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~ 95 (371)
+..+-+..||. +||||||++.+. +.+.+.|+.+.. . +..++.+.+.|+...... .......+.-+.
T Consensus 67 ~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~ 146 (224)
T 1pq7_A 67 SSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVS 146 (224)
T ss_dssp ECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEc
Confidence 34445566764 599999999753 223456777752 2 245789999998643211 112222222211
Q ss_pred ee----eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 96 IL----SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 96 ~~----~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
.. .+.........+-. ....-.|+|||||+..+|.++||++...
T Consensus 147 ~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~ 199 (224)
T 1pq7_A 147 RATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGN 199 (224)
T ss_dssp HHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCEEECTTCCEEEEEEECS
T ss_pred HHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcceECcCCeEEEEEEeCC
Confidence 10 01100000011111 2234579999999988899999987643
No 227
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.09 E-value=7.8e-05 Score=72.82 Aligned_cols=63 Identities=8% Similarity=0.092 Sum_probs=0.0
Q ss_pred HhccCCCCCCceEEEEECCCCcccc-CCCCCCEEEEECCEEecC--CCCccccccccchhhhhhhccCCCCEEEEEEEEC
Q 017471 189 VAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 265 (371)
Q Consensus 189 ~~~gl~~~~~gv~V~~V~~~spA~~-GL~~GDvIl~vnG~~V~~--~~~l~~~~~~~~~~~~~~~~~~~g~~v~l~v~R~ 265 (371)
..+|+.. .+.+|.+|.++|||++ ||++||+|++|||++|.+ ..++. ..+. ..++.+.++|.+.
T Consensus 308 ~~lG~~i--~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~----------~~l~--~~~~~v~L~V~p~ 373 (388)
T 3suz_A 308 YQLGFSV--QNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIV----------QALS--NSVGEIHMKTMPA 373 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceEE--ecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHH----------HHHH--hCCCeEEEEEEec
Confidence 3466642 3447889999999999 999999999999999974 34432 2332 2456677777654
No 228
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=97.08 E-value=0.0052 Score=54.77 Aligned_cols=124 Identities=13% Similarity=0.081 Sum_probs=65.2
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC------ceeeeeEEeeeeeeeccC-CCeEEeEEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT------ISVTSGVVSRIEILSYVH-GSTELLGLQI 111 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~------~s~t~G~Vs~~~~~~~~~-~~~~~~~i~~ 111 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... ..+..-+++...-..... .......+=.
T Consensus 87 ~DIALl~L~~~v~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca 166 (234)
T 3s9c_A 87 KDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCA 166 (234)
T ss_dssp GCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEE
T ss_pred CceEEEEECCccccCCcccccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEe
Confidence 599999998653 33456677776543 46899999998643211 112222222211110000 0000011111
Q ss_pred -----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhhhh
Q 017471 112 -----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 112 -----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
....-.|+|||||+. +++++||.+.... -......+....+....+++++..+
T Consensus 167 ~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 225 (234)
T 3s9c_A 167 GILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIA 225 (234)
T ss_dssp ECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHc
Confidence 123346999999997 5789999876532 1111122334455566677766554
No 229
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=97.06 E-value=0.0052 Score=54.71 Aligned_cols=124 Identities=16% Similarity=0.158 Sum_probs=64.3
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee----eccCCCeEEeEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL----SYVHGSTELLGL 109 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~----~~~~~~~~~~~i 109 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... .+.........+
T Consensus 85 ~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~ 164 (234)
T 3s69_A 85 KDIMLIKLDSRVSNSEHIVPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTL 164 (234)
T ss_dssp SCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEE
T ss_pred ccEEEEeeCCcCCCCCcceeeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceE
Confidence 699999998653 33345666665443 46799999998643211 01112222211110 011000000011
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhhhh
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
-. ....-.|+|||||+. +++++||.+.... -......+....+....+++++..+
T Consensus 165 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 225 (234)
T 3s69_A 165 CAGILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIA 225 (234)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred eccCCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhc
Confidence 11 123346999999997 5789999876532 1111122333455566677766544
No 230
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=96.98 E-value=0.0065 Score=53.73 Aligned_cols=133 Identities=11% Similarity=0.061 Sum_probs=68.6
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeee
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEI 96 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~ 96 (371)
..+-+..||. +||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+..
T Consensus 66 ~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~ 145 (223)
T 4i8h_A 66 SASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSD 145 (223)
T ss_dssp EEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCH
T ss_pred EEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCceeceECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCH
Confidence 4444566663 699999998653 33356677665433 56799999998643211 0112222221111
Q ss_pred e---eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 97 L---SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 97 ~---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
. ...........+=. ....-.|+|||||+. +++++||.+...........+....+....+++++..
T Consensus 146 ~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 220 (223)
T 4i8h_A 146 SSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp HHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred HHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 0 00110000011111 123346999999997 5699999876542221122233344555556665543
No 231
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=96.97 E-value=0.0029 Score=56.40 Aligned_cols=115 Identities=13% Similarity=0.058 Sum_probs=59.9
Q ss_pred CCCEEEEEEecC---CCcCCcc-ceecCCCCCCCCeEEEEEeCCCCC-C--ceeeeeEEeeeeeeeccCCCeEEeEEEEE
Q 017471 40 ICIYTMLTVEDD---EFWEGVL-PVEFGELPALQDAVTVVGYPIGGD-T--ISVTSGVVSRIEILSYVHGSTELLGLQID 112 (371)
Q Consensus 40 ~~DlAlLkv~~~---~~~~~l~-~~~l~~s~~lgd~V~~iG~p~g~~-~--~s~t~G~Vs~~~~~~~~~~~~~~~~i~~d 112 (371)
.+|+||||++.+ .+.+... ++.+......++.+.+.|++.... . ....+- .......... . .+.+.
T Consensus 89 ~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~~l~~C~---~~~~~~~~~~-~---~~~~~ 161 (218)
T 3cp7_A 89 EHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQELHSCH---GTATNDPMGS-S---TQGIP 161 (218)
T ss_dssp GGCCEEEEECCBTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSSSCEEEE---EECEECTTSS-S---CEEEE
T ss_pred cCCEEEEEEeCCCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCceeeEee---eeEEcCCCCC-c---eEEec
Confidence 479999999976 2211222 445543334578999999986421 1 011111 0000000011 0 12333
Q ss_pred eeccCCCCCCceecC---CCcEEEEEeeecccCCccceeccccC-cchhHhHhhh
Q 017471 113 AAINSGNSGGPAFND---KGKCVGIAFQSLKHEDVENIGYVIPT-PVIMHFIQDY 163 (371)
Q Consensus 113 a~i~~G~SGGPlvn~---~G~VIGI~~~~~~~~~~~~~~~aiP~-~~i~~~l~~L 163 (371)
|+...|+|||||+.. .++++||++..... .....++-.. +.++.+++..
T Consensus 162 Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc--~~~~~~~p~~~~~~~~l~~~a 214 (218)
T 3cp7_A 162 CNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTF--LPNVMFGPYFGSGAQQNYNYA 214 (218)
T ss_dssp CCCCTTCTTCEEEESSSSSSCEEEECCEEETT--EEEEEEECCCCHHHHHHHHHH
T ss_pred CCCCCCCcCCeeEEccCCCeEEEEEEccccCC--CCCcEEcCcCCHHHHHHHHHH
Confidence 445679999999864 37999998765421 1233333222 4455555554
No 232
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=96.89 E-value=0.0094 Score=52.90 Aligned_cols=132 Identities=13% Similarity=0.105 Sum_probs=67.1
Q ss_pred eEEEEEecC-------CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeee
Q 017471 31 PSATLVTAD-------ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEIL 97 (371)
Q Consensus 31 ~A~vv~~d~-------~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~ 97 (371)
..+-+..|| .+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+...
T Consensus 66 ~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~ 145 (222)
T 1hj8_A 66 SSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYS 145 (222)
T ss_dssp EEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHH
T ss_pred EEEEEEECCCCCCCCCCCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHH
Confidence 344445565 3699999999753 22346677775433 46789999998643211 11222222221110
Q ss_pred ---eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 98 ---SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 98 ---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
...........+-. ....-.|+|||||+. +|+++||.+....-......+...-+....+++++.
T Consensus 146 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~ 218 (222)
T 1hj8_A 146 DCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTST 218 (222)
T ss_dssp HHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred HhhhhccCCCCCCeEEeccCCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHH
Confidence 00000000011111 123457999999997 589999987654221111223333444455555543
No 233
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=96.85 E-value=0.0097 Score=52.85 Aligned_cols=122 Identities=12% Similarity=0.069 Sum_probs=62.4
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee---eccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL---SYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~---~~~~~~~~~~~i~ 110 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... ...........+=
T Consensus 83 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~C 162 (223)
T 3mfj_A 83 NDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFC 162 (223)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEE
T ss_pred CCEEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEE
Confidence 699999999753 33346677775543 4678999999864321 011222222221110 0011100001111
Q ss_pred E-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 111 I-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 111 ~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
. ....-.|+|||||+. +|+++||++....-......+....+....+++++.
T Consensus 163 a~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 219 (223)
T 3mfj_A 163 AGYLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQT 219 (223)
T ss_dssp ESCTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred ccCCCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 1 123347999999997 689999987643221111223334444455555543
No 234
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=96.81 E-value=0.02 Score=51.08 Aligned_cols=122 Identities=11% Similarity=0.121 Sum_probs=62.3
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeee---eeccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEI---LSYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~---~~~~~~~~~~~~i~ 110 (371)
+|+||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+.. ............+=
T Consensus 93 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~C 172 (235)
T 1ton_A 93 NDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLC 172 (235)
T ss_dssp TCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEE
T ss_pred CCEEEEEcCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEe
Confidence 599999999753 33346677765533 4679999999864321 11122222222211 11111100001111
Q ss_pred E-----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhh
Q 017471 111 I-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 111 ~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
. ....-.|+|||||+. +|.++||++.... -......+...-+....+++++.
T Consensus 173 a~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 230 (235)
T 1ton_A 173 AGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKV 230 (235)
T ss_dssp EECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHH
T ss_pred eccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 1 123457999999997 6899999875421 11111223334444555555554
No 235
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=96.79 E-value=0.014 Score=52.13 Aligned_cols=98 Identities=13% Similarity=0.084 Sum_probs=52.0
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC---C--ceeeeeEEeeeeeeec---cCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD---T--ISVTSGVVSRIEILSY---VHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~---~--~s~t~G~Vs~~~~~~~---~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... . .......+.-+..... .........+
T Consensus 94 ~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 173 (237)
T 1gvz_A 94 SHDLMLLRLAQPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVL 173 (237)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEE
T ss_pred CCceEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceE
Confidence 6799999999753 33345666665433 4578888888864311 1 0111111211111000 0000000011
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
=. ....-.|+|||||+. +|.++||.+..
T Consensus 174 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g 206 (237)
T 1gvz_A 174 CATHRDDSGSICLGDSGGALIC-DGVFQGITSWG 206 (237)
T ss_dssp EEECSSTTCEECGGGTTCEEEE-TTEEEEEECCC
T ss_pred EEeeCCCCCccCCCCccCcEee-CCEEEEEEEeC
Confidence 11 113456999999997 68999998654
No 236
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=96.78 E-value=0.015 Score=51.56 Aligned_cols=123 Identities=15% Similarity=0.114 Sum_probs=62.6
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC---CceeeeeEEeeeeee---eccCCCeEEeEEEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD---TISVTSGVVSRIEIL---SYVHGSTELLGLQI 111 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~---~~s~t~G~Vs~~~~~---~~~~~~~~~~~i~~ 111 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... ...........+-.
T Consensus 83 ~~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca 162 (223)
T 1lo6_A 83 DQDIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCA 162 (223)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEE
T ss_pred cCeEEEEEECCcccCCCceeecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEe
Confidence 3699999999653 33346677776543 4678899999864321 111222222211110 00111000011211
Q ss_pred -----EeeccCCCCCCceecCCCcEEEEEeee-cccCCccceeccccCcchhHhHhhh
Q 017471 112 -----DAAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 112 -----da~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
....-.|+|||||+. +|+++||++.. ..-......+...-+....+++++.
T Consensus 163 ~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 219 (223)
T 1lo6_A 163 GDEKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKT 219 (223)
T ss_dssp ECTTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHH
T ss_pred ecCCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 123457999999997 57999998754 2111111222334444455555554
No 237
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=96.77 E-value=0.0086 Score=53.25 Aligned_cols=97 Identities=16% Similarity=0.183 Sum_probs=53.6
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee---eccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL---SYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~---~~~~~~~~~~~i~ 110 (371)
+||||||++.+. |.+.+.|+.+.+.. ..++.+.+.|+..... ........+.-+... ...........+=
T Consensus 87 ~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~C 166 (225)
T 1npm_A 87 HDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVC 166 (225)
T ss_dssp TCCEEEEESSCCCCSSSSCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEE
T ss_pred ccEEEEeeCCcccCCCceeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEe
Confidence 499999998653 33346777776543 5679999999864311 111222222222110 0011100001111
Q ss_pred E----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 111 I----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 111 ~----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
. ....-.|+|||||+. +|.++||++..
T Consensus 167 a~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g 197 (225)
T 1npm_A 167 AGSSNGADTCQGDSGGPLVC-DGMLQGITSWG 197 (225)
T ss_dssp EECTTCCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred ecCCCCCeecCCCCCchheE-CCEEEEEEEeC
Confidence 1 233457999999997 58999998764
No 238
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=96.77 E-value=0.01 Score=52.35 Aligned_cols=93 Identities=16% Similarity=0.181 Sum_probs=51.4
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeeeccCCCeEEeEEEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYVHGSTELLGLQI 111 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~~~~~~~~~~~i~~ 111 (371)
.+|+||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+ ...... ... +...
T Consensus 89 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--~~~-Ca~~ 164 (221)
T 1fuj_A 89 LNDILLIQLSSPANLSASVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRP--HNI-CTFV 164 (221)
T ss_dssp BCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCT--TEE-EEEC
T ss_pred cccEEEEEeCCccccCCcceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCC--cee-eecc
Confidence 4799999999753 23346666665433 35789999998643211 01111111111 000000 010 1100
Q ss_pred ---EeeccCCCCCCceecCCCcEEEEEee
Q 017471 112 ---DAAINSGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 112 ---da~i~~G~SGGPlvn~~G~VIGI~~~ 137 (371)
....-.|+|||||+. +|.++||.+.
T Consensus 165 ~~~~~~~C~GDSGgPL~~-~~~l~Gi~s~ 192 (221)
T 1fuj_A 165 PRRKAGICFGDSGGPLIC-DGIIQGIDSF 192 (221)
T ss_dssp SSSSCBCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred CCCCCCCCCCCCCCeeEE-CCEEeEEEEE
Confidence 123457999999998 6899999865
No 239
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=96.76 E-value=0.0099 Score=52.93 Aligned_cols=132 Identities=13% Similarity=0.143 Sum_probs=66.4
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeee
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEI 96 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~ 96 (371)
..+-+..||. +||||||++.+. |.+.+.|+.+.... ..++.+.+.|+...... .......+.-+..
T Consensus 70 ~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~ 149 (228)
T 1fxy_A 70 EVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQ 149 (228)
T ss_dssp EEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCH
T ss_pred EEEEEEECCCCCCCCCcCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCH
Confidence 3444555653 699999999653 33345666665433 46789999998643211 1122222221111
Q ss_pred e---eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 97 L---SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 97 ~---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
. ...........+-. ....-.|+|||||+. +|+++||++....-......+...-+....+++++.
T Consensus 150 ~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (228)
T 1fxy_A 150 AKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNT 223 (228)
T ss_dssp HHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHH
T ss_pred HHhHhhcCCCCCCCEEEeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHH
Confidence 0 00011000011111 123457999999997 579999987643221111222333344455555443
No 240
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=96.75 E-value=0.0096 Score=49.72 Aligned_cols=99 Identities=14% Similarity=0.098 Sum_probs=53.1
Q ss_pred CCCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-------CceeeeeEEeeeeee---eccCCCeEE
Q 017471 39 DICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEIL---SYVHGSTEL 106 (371)
Q Consensus 39 ~~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-------~~s~t~G~Vs~~~~~---~~~~~~~~~ 106 (371)
..+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+-.... ........+.-+... .........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 35899999999753 33346677776533 4578899999853211 111122222221110 001000000
Q ss_pred eEEEE-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 107 LGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 107 ~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
..+=. ....-.|+|||||+-. |+++||++..
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~~-g~l~Gi~S~g 121 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLICN-GMWQGITSWG 121 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEET-TEEEEEECCC
T ss_pred CEEeeccCCCCCcccCCccccceEEC-CEEEEEEecC
Confidence 11111 1233469999999974 8999998754
No 241
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=96.73 E-value=0.016 Score=51.73 Aligned_cols=123 Identities=11% Similarity=0.014 Sum_probs=62.2
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... ...........+
T Consensus 94 ~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 173 (237)
T 1ao5_A 94 SDDLMLLRLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVML 173 (237)
T ss_dssp TTCCEEEEESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEE
T ss_pred CCCEEEEEeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEE
Confidence 5799999999753 32345677665543 4578899999854211 111222222221110 000000000111
Q ss_pred EEE-----eeccCCCCCCceecCCCcEEEEEeee-cccCCccceeccccCcchhHhHhhh
Q 017471 110 QID-----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 110 ~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
=.. ...-.|+|||||+. +|.++||++.. ..-......+....+....+++++.
T Consensus 174 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 1ao5_A 174 CAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDT 232 (237)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHH
T ss_pred EEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 111 23447999999997 68999998764 2111111223334444555555543
No 242
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=96.72 E-value=0.019 Score=50.60 Aligned_cols=93 Identities=15% Similarity=0.143 Sum_probs=51.0
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeeeccCCCeEEeEEEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYVHGSTELLGLQI 111 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~~~~~~~~~~~i~~ 111 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+ ....... .. +...
T Consensus 86 ~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~~--~~-Ca~~ 161 (218)
T 2z7f_E 86 LNDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRRS--NV-CTLV 161 (218)
T ss_dssp BSCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCTT--SE-EEEC
T ss_pred CCCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCcc--ee-eecc
Confidence 4799999998653 22345666665433 34688999998643221 01111111111 1000000 00 0000
Q ss_pred ---EeeccCCCCCCceecCCCcEEEEEee
Q 017471 112 ---DAAINSGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 112 ---da~i~~G~SGGPlvn~~G~VIGI~~~ 137 (371)
....-.|+|||||+. +|.++||.+.
T Consensus 162 ~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~ 189 (218)
T 2z7f_E 162 RGRQAGVCFGDSGSPLVC-NGLIHGIASF 189 (218)
T ss_dssp TTSCCBCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred CCCCCeeCCCcCCCceEE-ccEEEEEEEe
Confidence 123457999999997 5799999876
No 243
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=96.71 E-value=0.02 Score=51.11 Aligned_cols=123 Identities=15% Similarity=0.084 Sum_probs=62.1
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.+.. ..++.+.+.|+...... .......+.-+... ...........+
T Consensus 94 ~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 173 (237)
T 2zch_P 94 SHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFML 173 (237)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEE
T ss_pred CcceEEEEeCCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEE
Confidence 4699999999653 33345666665533 46789999998643211 11122222211110 000000000111
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhh
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
=. ....-.|+|||||+. +|.++||++.... -......+....+....+++++.
T Consensus 174 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 2zch_P 174 CAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDT 232 (237)
T ss_dssp EEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred eecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 11 123457999999997 5799999875431 11111223334444555555554
No 244
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=96.70 E-value=0.019 Score=51.28 Aligned_cols=112 Identities=16% Similarity=0.150 Sum_probs=67.2
Q ss_pred CCCEEEEEEecCCCcCCccceecC---CCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeecc
Q 017471 40 ICIYTMLTVEDDEFWEGVLPVEFG---ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAIN 116 (371)
Q Consensus 40 ~~DlAlLkv~~~~~~~~l~~~~l~---~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~ 116 (371)
..|+.++|...+ +||.+-. ..|..+|.|..+|..+.... ....||.........+.. +...=.+..
T Consensus 87 g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~---~~s~vSesS~i~p~~~~~---fWkHwIsT~ 155 (229)
T 1lvm_A 87 GRDMIIIRMPKD-----FPPFPQKLKFREPQREERICLVTTNFQTKS---MSSMVSDTSCTFPSSDGI---FWKHWIQTK 155 (229)
T ss_dssp TSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEEEEEEECSSSS---CEEEECCCEECEEETTTT---EEEECBCCC
T ss_pred CccEEEEeCCCc-----CCCcccccccCCCCCCCeEEEEEeEeecCC---ccEEECCcceeEecCCCC---EeEEEeeCC
Confidence 578888888763 4554322 45678899999999875433 222333322111111111 233334557
Q ss_pred CCCCCCceec-CCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 117 SGNSGGPAFN-DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 117 ~G~SGGPlvn-~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
.|.-|.|+++ .+|.+|||.+.... .+..++.-++|-+.. ++++...
T Consensus 156 ~G~CGlPlVs~~Dg~IVGiHsl~~~-~~~~NyF~~f~~~f~-~~L~~~~ 202 (229)
T 1lvm_A 156 DGQCGSPLVSTRDGFIVGIHSASNF-TNTNNYFTSVPKNFM-ELLTNQE 202 (229)
T ss_dssp TTCTTCEEEETTTCCEEEEEEEEET-TSCSEEEEECCTTHH-HHHHCGG
T ss_pred CCcCCCcEEECCCCcEEEEEccccc-CCCeEEEeCCCHHHH-HHHhccc
Confidence 8999999998 56999999876542 123444445555555 7777653
No 245
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=96.68 E-value=0.02 Score=50.92 Aligned_cols=125 Identities=13% Similarity=0.079 Sum_probs=65.5
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeeeeccC------CCeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILSYVH------GSTEL 106 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~~~~~------~~~~~ 106 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+....... .....
T Consensus 86 ~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 165 (238)
T 4e7n_A 86 DKDIMLIRLDSPVKNSKHIAPFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATS 165 (238)
T ss_dssp SCCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCC
T ss_pred CCcEEEEEeCCCccCCCceeeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCC
Confidence 3699999998653 33345666665443 46799999998642111 111222222221110000 00000
Q ss_pred eEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhhhh
Q 017471 107 LGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 107 ~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
..+-. ....-.|+|||||+. +++++||.+.... -......+....+....+++++..+
T Consensus 166 ~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 229 (238)
T 4e7n_A 166 RTLCAGILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA 229 (238)
T ss_dssp SEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred CeEEeCCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence 11111 123346999999997 5799999876532 1111223344555666677766554
No 246
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=96.66 E-value=0.026 Score=49.00 Aligned_cols=106 Identities=18% Similarity=0.219 Sum_probs=67.5
Q ss_pred CCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCC
Q 017471 40 ICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 119 (371)
Q Consensus 40 ~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~ 119 (371)
..||++++++..+-+.++... +.+.......+..+-+........+..|.+...+.. ...+......+..++|-.+|.
T Consensus 73 ~~Elt~v~l~~~~kfRDIrkf-i~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~G~ 150 (187)
T 3qzr_A 73 NLALTLITLDTNEKFRDITKF-IPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-NLSGKPTHRTMMYNFPTKAGQ 150 (187)
T ss_dssp CCSEEEEEECSSCCBCCCGGG-SCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTTC
T ss_pred EEEEEEEEcCCCccccchHHh-CccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-eCCCCccccEEEECCCCCCCc
Confidence 369999999975422233321 223223223445555554444445666888776643 333344456789999999999
Q ss_pred CCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 120 SGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
-||+|+. .|+++||..+. ....+|+.+.
T Consensus 151 CGgvl~~-~gkIiGIHvaG-----nG~~G~~a~L 178 (187)
T 3qzr_A 151 CGGVVTS-VGKIIGIHIGG-----NGRQGFCAGL 178 (187)
T ss_dssp TTCEEEE-TTEEEEEEEEE-----CSSCEEEEEC
T ss_pred cCCeEEe-cCcEEEEEECC-----CCCcEEEEEe
Confidence 9999997 79999999885 2344555544
No 247
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=96.64 E-value=0.011 Score=52.31 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=56.3
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeee
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRI 94 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~ 94 (371)
+..+-+..||. +||||||++.+. +.+...++.+.... ..++.+.+.|+...... .......+.-+
T Consensus 70 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~ 149 (224)
T 3rp2_A 70 IKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIM 149 (224)
T ss_dssp EEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEE
T ss_pred EEEEEEEECCCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeec
Confidence 34455566664 699999998653 22345566665432 35688999998532111 01111112111
Q ss_pred eeeeccC-CCe-EEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 95 EILSYVH-GST-ELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 95 ~~~~~~~-~~~-~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
....... ... ....+-. ....-.|+|||||+. ++.++||.+...
T Consensus 150 ~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~ 200 (224)
T 3rp2_A 150 DEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGH 200 (224)
T ss_dssp CGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECC
T ss_pred ChHHhccccccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECC
Confidence 1110100 000 0001111 122346999999997 579999987643
No 248
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=96.59 E-value=0.015 Score=51.61 Aligned_cols=119 Identities=13% Similarity=0.074 Sum_probs=63.4
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeeeccCCCeEEeEEEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYVHGSTELLGLQI 111 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~~~~~~~~~~~i~~ 111 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+....... ..+-.
T Consensus 87 ~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~-----~~~Ca 161 (225)
T 1a7s_A 87 LNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP-----NNVCT 161 (225)
T ss_dssp BSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT-----TEEEE
T ss_pred cCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc-----CceEE
Confidence 4799999998653 22345666665432 35688999998643211 111122221111110111 11111
Q ss_pred -----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhhh
Q 017471 112 -----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 112 -----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
....-.|+|||||+.. |.++||.+.....-+.. .+....+....+++++..+
T Consensus 162 ~~~~~~~~~C~GDSGgPl~~~-g~l~Gi~S~g~~~C~~~-p~vyt~V~~~~~WI~~~~~ 218 (225)
T 1a7s_A 162 GVLTRRGGICNGDGGTPLVCE-GLAHGVASFSLGPCGRG-PDFFTRVALFRDWIDGVLN 218 (225)
T ss_dssp ECSSSSCBCCTTCTTCEEEET-TEEEEEEEEECSSTTSS-CEEEEEGGGGHHHHHHHHH
T ss_pred eccCCCCCcccCCCcchheeC-CEEEEEEEEccCCcCCC-CcEEEEhHHhHHHHHHHhc
Confidence 1234579999999975 79999987652111111 3334445556666666544
No 249
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=96.58 E-value=0.036 Score=48.91 Aligned_cols=108 Identities=15% Similarity=0.115 Sum_probs=55.5
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeee
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIE 95 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~ 95 (371)
..+-+..||. +||||||++.+. +...+.++.+.... ..++.+.+.|+...... .......+.-+.
T Consensus 71 ~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~ 150 (226)
T 4ag1_A 71 EVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMD 150 (226)
T ss_dssp EEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEEC
T ss_pred EEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcC
Confidence 3444456664 699999998653 22344555554322 35788999998643211 112222222221
Q ss_pred eeecc--CCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 96 ILSYV--HGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 96 ~~~~~--~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
..... ........+-. ....-.|+|||||+. ++.++||.+...
T Consensus 151 ~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~ 200 (226)
T 4ag1_A 151 PQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGR 200 (226)
T ss_dssp GGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECB
T ss_pred hHHcccccCcCccceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECC
Confidence 11111 00000001111 123446999999997 679999987654
No 250
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=96.58 E-value=0.023 Score=50.59 Aligned_cols=124 Identities=13% Similarity=0.128 Sum_probs=64.4
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... ........ ..+
T Consensus 83 ~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~-~~~ 161 (231)
T 2aiq_A 83 DKDIMLIRLNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAA-TTL 161 (231)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCS-SEE
T ss_pred CCCEEEEEecCCCCCCCcEEeeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCc-CcE
Confidence 3699999999753 33345677776543 4678999999864321 111122222222110 00111000 111
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeee-cccCCccceeccccCcchhHhHhhhhh
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
-. ....-.|+|||||+. +|+++||++.. ..-......+....+....+++++..+
T Consensus 162 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (231)
T 2aiq_A 162 CAGILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIIS 222 (231)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred EeccCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 11 123457999999997 58999998765 211111122333445556666666543
No 251
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=96.57 E-value=0.025 Score=50.50 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=52.1
Q ss_pred CCEEEEEEecCC--CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 41 CIYTMLTVEDDE--FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 41 ~DlAlLkv~~~~--~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... ...........+
T Consensus 95 ~DIALl~L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 174 (238)
T 1spj_A 95 HDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFML 174 (238)
T ss_dssp TCCEEEEESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEE
T ss_pred CCeEEEEECccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeE
Confidence 599999998653 33346667665433 46789999998542211 11222222211110 000000000111
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
-. ....-.|+|||||+. +|.++||++..
T Consensus 175 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 207 (238)
T 1spj_A 175 CVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWG 207 (238)
T ss_dssp EEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred EeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeC
Confidence 11 123447999999997 57999998764
No 252
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=96.54 E-value=0.021 Score=50.95 Aligned_cols=133 Identities=14% Similarity=0.203 Sum_probs=65.6
Q ss_pred EeEEEEEecC-------CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeee
Q 017471 30 APSATLVTAD-------ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRI 94 (371)
Q Consensus 30 ~~A~vv~~d~-------~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~ 94 (371)
+..+-+..|| .+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+
T Consensus 78 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~ 157 (241)
T 3ncl_A 78 RRLKRIISHPFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVI 157 (241)
T ss_dssp EEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEE
Confidence 3445556666 4799999998653 33345666665432 35788999998542111 11222222211
Q ss_pred eee---eccCCCeEEeEEEE-----EeeccCCCCCCcee--cCCCc--EEEEEeeecccCCccceeccccCcchhHhHhh
Q 017471 95 EIL---SYVHGSTELLGLQI-----DAAINSGNSGGPAF--NDKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 162 (371)
Q Consensus 95 ~~~---~~~~~~~~~~~i~~-----da~i~~G~SGGPlv--n~~G~--VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~ 162 (371)
... ...........+=. ....-.|+|||||+ +.+|+ ++||.+...........+....+....+++++
T Consensus 158 ~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~ 237 (241)
T 3ncl_A 158 NQTTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKE 237 (241)
T ss_dssp CHHHHHHHSTTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHH
T ss_pred CHHHhhhhcccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 110 00011000011111 12345799999997 34565 88998764322111222333444445555544
No 253
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=96.51 E-value=0.009 Score=53.01 Aligned_cols=123 Identities=17% Similarity=0.132 Sum_probs=63.6
Q ss_pred CCCEEEEEEecCC-CcC-CccceecCCC---CCCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee----eccCC---
Q 017471 40 ICIYTMLTVEDDE-FWE-GVLPVEFGEL---PALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL----SYVHG--- 102 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~-~l~~~~l~~s---~~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~----~~~~~--- 102 (371)
.+|+|||+++.+. +.+ ...|+.+... +..++.+.+.|+..... ........+.-+... .+...
T Consensus 83 ~~DiAll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~ 162 (235)
T 3h7t_A 83 QNNYAVIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEAD 162 (235)
T ss_dssp BTCCEEEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCG
T ss_pred CCCeEEEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccC
Confidence 4799999999653 222 4566666543 34578999999854311 111222222222110 01000
Q ss_pred -CeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 103 -STELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 103 -~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
......+=. ....-.|+|||||+. +|+++||++....-.. ...+....+....+++++..
T Consensus 163 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i 228 (235)
T 3h7t_A 163 KYIYDGVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPS-EFPSVFLRVGYYVLDIKDII 228 (235)
T ss_dssp GGCSTTEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCT-TSCEEEEEGGGGHHHHHHHH
T ss_pred ccccCCeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCC-CCCceEEEHHHHHHHHHHHH
Confidence 000001111 223347999999997 7899999875432211 22333344555666666654
No 254
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=96.50 E-value=0.016 Score=51.48 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=52.4
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----Cceee---eeEEeeeeeeeccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVT---SGVVSRIEILSYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t---~G~Vs~~~~~~~~~~~~~~~~i~ 110 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ..... .-+++..+-............+-
T Consensus 82 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~C 161 (224)
T 2qxi_A 82 NDLMLVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLC 161 (224)
T ss_dssp TCCEEEECSSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEE
T ss_pred CcEEEEEeCCCCcCCCceeeEECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEE
Confidence 699999998653 33346677775433 4678999999864321 01111 22222111000000000001111
Q ss_pred E-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 111 I-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 111 ~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
. ....-.|+|||||+. +|+++||.+..
T Consensus 162 a~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 193 (224)
T 2qxi_A 162 AGIPDSKKNACNGDSGGPLVC-RGTLQGLVSWG 193 (224)
T ss_dssp EECTTCCCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred ecCCCCCCccCCCCccccEEE-CCEEEEEEEeC
Confidence 1 123447999999997 68999998754
No 255
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=96.49 E-value=0.026 Score=50.02 Aligned_cols=108 Identities=11% Similarity=0.083 Sum_probs=58.0
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC---ceeeeeEEeeeeee
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT---ISVTSGVVSRIEIL 97 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~---~s~t~G~Vs~~~~~ 97 (371)
+..+-+..||. +||||||++.+. +.+.+.|+.+.+.. ..++.+.+.|+...... .......+.-+...
T Consensus 67 ~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~ 146 (223)
T 2bdg_A 67 VEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEE 146 (223)
T ss_dssp EEEEEEEECTTTTSSTTCSCCEEEEESSCCCCCSSCCCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHH
T ss_pred EEEEEEEeCCCCCCCCCcCcEEEEEECCcccCCCceecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHH
Confidence 34444556653 699999998763 32346667665433 46789999998643221 11122222211110
Q ss_pred ---eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 98 ---SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 98 ---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
...........+-. ....-.|+|||||+. +|.++||++..
T Consensus 147 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g 194 (223)
T 2bdg_A 147 VCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLIC-NGYLQGLVSFG 194 (223)
T ss_dssp HHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred HhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCchheE-ccEEEEEEEec
Confidence 00010000011111 123447999999997 47999998754
No 256
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=96.47 E-value=0.022 Score=50.61 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=52.0
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee---eccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL---SYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~---~~~~~~~~~~~i~ 110 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... ...........+=
T Consensus 86 ~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~C 165 (227)
T 2psx_A 86 NDLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFC 165 (227)
T ss_dssp TCCEEEEESSCCCCCSSSCCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEE
T ss_pred CCEEEEEeCCCCCCCCceeeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEc
Confidence 699999999753 23346677775433 45789999998643211 11222222211110 0000000001111
Q ss_pred E----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 111 I----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 111 ~----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
. ....-.|+|||||+. +|.++||++..
T Consensus 166 a~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 196 (227)
T 2psx_A 166 AGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWG 196 (227)
T ss_dssp ECCSTTCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred ccCCCCCccCCCCCCcceee-CCEEEEEEeec
Confidence 1 112347999999997 46999998754
No 257
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=96.45 E-value=0.027 Score=50.41 Aligned_cols=124 Identities=12% Similarity=0.045 Sum_probs=59.1
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC--------ceeeeeEEeeeeeeeccCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~--------~s~t~G~Vs~~~~~~~~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... ..+..-+++..+-............+
T Consensus 97 ~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 176 (240)
T 1sgf_A 97 SNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAML 176 (240)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEE
T ss_pred CCceEEEEeCCcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeE
Confidence 3699999999753 33346677775433 56788988887542110 11122222211100000000000011
Q ss_pred EE-----EeeccCCCCCCceecCCCcEEEEEeeecc-cCCccceeccccCcchhHhHhhhh
Q 017471 110 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 110 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
=. ....-.|+|||||+. +|.++||.+.... -......+....+....+++++..
T Consensus 177 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 236 (240)
T 1sgf_A 177 CAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236 (240)
T ss_dssp EEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHH
T ss_pred eEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHH
Confidence 11 123457999999997 6899999875421 111112233344555666665543
No 258
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=96.44 E-value=0.049 Score=48.04 Aligned_cols=130 Identities=14% Similarity=0.102 Sum_probs=64.9
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeee
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIE 95 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~ 95 (371)
..+-+..||. +||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+.
T Consensus 71 ~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~ 150 (227)
T 3fzz_A 71 PVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQK 150 (227)
T ss_dssp EEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCC
T ss_pred EEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeec
Confidence 3444555664 699999998653 23345666665432 35789999998542111 112222222111
Q ss_pred ee---e-ccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 96 IL---S-YVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 96 ~~---~-~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
.. . +.........+-. ....-.|+|||||+. ++.++||.+........ .+....+....+++++.
T Consensus 151 ~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~~c~~~--p~vyt~V~~~~~WI~~~ 224 (227)
T 3fzz_A 151 DQVCESQFQSSYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQTDGSA--PQVFTRVLSFVSWIKKT 224 (227)
T ss_dssp HHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECCTTCSS--SEEEEEGGGTHHHHHHH
T ss_pred HHHhhhhhccccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECCCCCCC--CeEEEEhHHhHHHHHHH
Confidence 10 0 1000000001111 123346899999997 46999998764422111 22333344455555443
No 259
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=96.38 E-value=0.028 Score=49.58 Aligned_cols=107 Identities=17% Similarity=0.128 Sum_probs=55.5
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCCCcCCccceecCCCCC-CCCeEEEEEeCCCCCC----ceeeeeEEeeeeee
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDEFWEGVLPVEFGELPA-LQDAVTVVGYPIGGDT----ISVTSGVVSRIEIL 97 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~~~~~l~~~~l~~s~~-lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~ 97 (371)
+..+-+..||. +||||||++.+. .++++.+..... .++.+.+.|+...... .......+.-+...
T Consensus 65 ~~v~~i~~hp~y~~~~~~~DIALl~L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~ 141 (224)
T 3beu_A 65 VRSTKVLQAPGFTKETYGKDWALIKLAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDA 141 (224)
T ss_dssp EEEEEEEECTTCCCGGGSCCCEEEEESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHH
T ss_pred EEEEEEEeCCCcCCCcCCCCEEEEEeCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHH
Confidence 33444455664 599999999764 456677655432 3468889998643211 11222222211110
Q ss_pred ---e-ccCCCeEEeEEEE-----EeeccCCCCCCceecCC--C--cEEEEEeeec
Q 017471 98 ---S-YVHGSTELLGLQI-----DAAINSGNSGGPAFNDK--G--KCVGIAFQSL 139 (371)
Q Consensus 98 ---~-~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~--G--~VIGI~~~~~ 139 (371)
. +.........+=. ....-.|+|||||+-.+ | .++||++...
T Consensus 142 ~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~ 196 (224)
T 3beu_A 142 ACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGE 196 (224)
T ss_dssp HHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEES
T ss_pred HhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCC
Confidence 0 1000000001111 12345799999998543 3 6899987654
No 260
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=96.33 E-value=0.048 Score=47.19 Aligned_cols=105 Identities=20% Similarity=0.208 Sum_probs=65.8
Q ss_pred CCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCC
Q 017471 40 ICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 119 (371)
Q Consensus 40 ~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~ 119 (371)
..|+++++++..+-+.++... +.+.....+.++++ +..+....-+..|.+...+... ..+......+..+++-.+|.
T Consensus 69 ~~eltlv~l~~~~kfRDIrkf-i~~~~~~~~~~lv~-n~~~~p~~~~~vg~~~~~g~i~-l~G~~t~~~~~Y~~pTk~G~ 145 (182)
T 2b0f_A 69 NLELTVLTLDRNEKFRDIRGF-ISEDLEGVDATLVV-HSNNFTNTILEVGPVTMAGLIN-LSSTPTNRMIRYDYATKTGQ 145 (182)
T ss_dssp EEEEEEEEECCSSCBCCGGGT-BCSSCCCSEEEEEE-ESSSCEEEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTC
T ss_pred eeEEEEEECCCcccccchHHh-cCCCCCCCceEEEE-EcCCCceEEEEecceEEeceEc-CCCcEecceEEeccCCCCcc
Confidence 589999999865533344331 22222212445555 4333332234677777655432 33444456788999999999
Q ss_pred CCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 120 SGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
-||||+. +|+++||..+. ....+||.+.
T Consensus 146 CGgvl~~-~gkIlGIHvaG-----~G~~Gfaa~l 173 (182)
T 2b0f_A 146 CGGVLCA-TGKIFGIHVGG-----NGRQGFSAQL 173 (182)
T ss_dssp TTCEEEE-TTEEEEEEEEE-----ETTEEEEEEC
T ss_pred cCCeEEe-CCCEEEEEeCC-----CCCceEehhh
Confidence 9999997 78999999885 3445665544
No 261
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=96.33 E-value=0.081 Score=47.12 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=59.6
Q ss_pred CCEEEEEEecC-----CCcCCccceecCCC---CCCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeeeecc----CCC
Q 017471 41 CIYTMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILSYV----HGS 103 (371)
Q Consensus 41 ~DlAlLkv~~~-----~~~~~l~~~~l~~s---~~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~~~~----~~~ 103 (371)
+||||||++.+ .+...+.++.+... +..++.+.+.|+...... .......+.-+...... .+.
T Consensus 96 ~DIALl~L~~~~~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 175 (247)
T 3mhw_U 96 NDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGS 175 (247)
T ss_dssp SCCEEEEEECTTSCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGG
T ss_pred CcEEEEEeCCccccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCC
Confidence 59999999865 23345666666542 345788999998643211 11222222222111000 000
Q ss_pred -eEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhh
Q 017471 104 -TELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 162 (371)
Q Consensus 104 -~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~ 162 (371)
.....+=. ....-.|+|||||+-. +| .++||.+...........+....+....+++++
T Consensus 176 ~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 243 (247)
T 3mhw_U 176 EVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRS 243 (247)
T ss_dssp GCCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHH
T ss_pred cCCCCeEecCCCCCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 00011111 1233479999999853 45 499998764322111122333444445555544
No 262
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=96.31 E-value=0.017 Score=51.10 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=62.2
Q ss_pred CCCEEEEEEecCC-CcC-CccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeee----eccCCCeEE
Q 017471 40 ICIYTMLTVEDDE-FWE-GVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEIL----SYVHGSTEL 106 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~-~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~----~~~~~~~~~ 106 (371)
.+||||||++.+. +.+ ...|+.+.... ..++.+.+.|+...... .......+.-+... .+.......
T Consensus 87 ~~DIALl~L~~~v~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 166 (228)
T 3h7o_A 87 ENDIAILELSRPLKLDGLKSKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSL 166 (228)
T ss_dssp BTCCEEEEESSCCCCCSSSSCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCS
T ss_pred cCCEEEEEECCcccccccccccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCc
Confidence 4799999998753 222 45666665433 45788999998643221 11222222222110 011000000
Q ss_pred eEEEE---EeeccCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 107 LGLQI---DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 107 ~~i~~---da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
..+-. +...-.|+|||||+. +++++||.+....... ...+...-+....+++++..
T Consensus 167 ~~~Ca~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i 225 (228)
T 3h7o_A 167 QVFCAQKVGVSLESGDAGDPTVQ-QDTLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDII 225 (228)
T ss_dssp SEEEEECTTCCCCGGGTTCEEEE-TTEEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHH
T ss_pred eEEecCCCCCcCCCCCCCCccee-cCeEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHh
Confidence 01111 123346999999997 6789999875432111 12233344444555555543
No 263
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=96.23 E-value=0.063 Score=46.57 Aligned_cols=104 Identities=17% Similarity=0.227 Sum_probs=66.4
Q ss_pred CCEEEEEEecCCCcCCccceecCCCCCCC-CeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCC
Q 017471 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQ-DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 119 (371)
Q Consensus 41 ~DlAlLkv~~~~~~~~l~~~~l~~s~~lg-d~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~ 119 (371)
.||++|+++..+-+.++.. -+.+..... +-++++ +........+..|.+...+.. ..++......+..++|..+|.
T Consensus 72 lElt~v~l~~~~kFRDIrk-fi~~~~~~~~~~~Lv~-ns~~~p~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~G~ 148 (191)
T 3q3y_A 72 LELTLLKLNRNEKFRDIRG-FLAREEVEVNEAVLAI-NTSKFPNMYIPVGQVTDYGFL-NLGGTPTKRMLVYNFPTRAGQ 148 (191)
T ss_dssp EEEEEEEEECSSCBCCCGG-GBCSSCCCEEEEEEEE-CSSSSTTEEEEEEEEEEEEEE-EETTEEEEEEEEEESCCCTTC
T ss_pred EEEEEEECCCCccccchHH-hcccccccCCceEEEE-EcCCCcceEEEeccEEEcceE-eCCCCcccCEEEecCCCCCCc
Confidence 5999999997542233333 123333333 444444 544444435667888776543 233444456799999999999
Q ss_pred CCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 120 SGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
-||+|+. .|+++||..+. ....+|+.+.
T Consensus 149 CGgvL~~-~gkIiGIHvgG-----nG~~Gfaa~L 176 (191)
T 3q3y_A 149 CGGVLMS-TGKVLGIHVGG-----NGHQGFSAAL 176 (191)
T ss_dssp TTCEEEE-TTEEEEEEEEE-----ETTEEEEEEC
T ss_pred cCCEEEe-CCCEEEEEECC-----CCcceEEeeh
Confidence 9999997 69999999874 2344555443
No 264
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=96.20 E-value=0.037 Score=48.97 Aligned_cols=109 Identities=15% Similarity=0.058 Sum_probs=57.4
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC---CceeeeeEEeeee
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---TISVTSGVVSRIE 95 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~---~~s~t~G~Vs~~~ 95 (371)
+..+-+..||. +||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+.
T Consensus 69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~ 148 (224)
T 1cgh_A 69 ITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQR 148 (224)
T ss_dssp EEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCC
T ss_pred EEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeC
Confidence 34444555654 599999998753 33346677765433 3578899999864321 1112222222111
Q ss_pred ee---eccCCCeEEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 96 IL---SYVHGSTELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 96 ~~---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
.. ...........+-. ....-.|+|||||+. +|.++||++...
T Consensus 149 ~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~ 199 (224)
T 1cgh_A 149 DRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGK 199 (224)
T ss_dssp HHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECC
T ss_pred HHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCccceEE-ccEEEEEEEEEC
Confidence 10 00000000001111 123347999999997 579999987643
No 265
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=96.09 E-value=0.051 Score=48.11 Aligned_cols=107 Identities=16% Similarity=0.140 Sum_probs=56.5
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeee
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIE 95 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~ 95 (371)
..+-+..||. +||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+.
T Consensus 70 ~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~ 149 (227)
T 1iau_A 70 PVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAVQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQE 149 (227)
T ss_dssp EEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCC
T ss_pred EEEEEECCCCCCCCCCCCCeEEEEECCcccCCCceecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeec
Confidence 3444455653 699999998653 22345666665433 3578999999864321 1112222222111
Q ss_pred ee---eccCCCeEEe-EEEE-----EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 96 IL---SYVHGSTELL-GLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 96 ~~---~~~~~~~~~~-~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
.. .......... .+-. ....-.|+|||||+. +|.++||++..
T Consensus 150 ~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 200 (227)
T 1iau_A 150 DRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSGGPLVC-NKVAQGIVSYG 200 (227)
T ss_dssp HHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTTSEEEE-TTEEEEEEEEE
T ss_pred hHHhhhHhccccCCCcEEEeECCCCCCeeeecCCCchheE-eeEEEEEEeEe
Confidence 10 0000000000 1111 123346999999997 57999998765
No 266
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=96.07 E-value=0.091 Score=46.84 Aligned_cols=98 Identities=14% Similarity=0.116 Sum_probs=52.5
Q ss_pred CCEEEEEEecCC-CcCCccceecCC--CCCCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee-----eccCC--CeE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGE--LPALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL-----SYVHG--STE 105 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~--s~~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~-----~~~~~--~~~ 105 (371)
+||||||++.+. +.+.+.|+.+.. ....++.+.+.|+..... ........+.-+... ....+ ...
T Consensus 91 ~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~ 170 (240)
T 1mza_A 91 NDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFIT 170 (240)
T ss_dssp SCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCC
T ss_pred ceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCC
Confidence 799999999753 223456666654 224578899999854321 111222222222111 01111 000
Q ss_pred EeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 106 LLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 106 ~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
...+=. ....-.|+|||||+- +|.++||++...
T Consensus 171 ~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~ 208 (240)
T 1mza_A 171 KDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGH 208 (240)
T ss_dssp TTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSC
T ss_pred CCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECC
Confidence 011111 123447999999997 579999987543
No 267
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=96.01 E-value=0.091 Score=46.72 Aligned_cols=99 Identities=13% Similarity=0.127 Sum_probs=51.6
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeeecc----CCC-eEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYV----HGS-TEL 106 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~~~----~~~-~~~ 106 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+...... .+. ...
T Consensus 91 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 170 (236)
T 1elt_A 91 GYDIALLRLNTQASLNSAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKT 170 (236)
T ss_dssp CCCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCT
T ss_pred CccEEEEECCCCCccCCcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCc
Confidence 4699999998653 33345666665432 34688999998643211 11122222111110000 000 000
Q ss_pred eEEEE---EeeccCCCCCCceecC-CC--cEEEEEeee
Q 017471 107 LGLQI---DAAINSGNSGGPAFND-KG--KCVGIAFQS 138 (371)
Q Consensus 107 ~~i~~---da~i~~G~SGGPlvn~-~G--~VIGI~~~~ 138 (371)
..+-. ....-.|+|||||+-. +| .++||.+..
T Consensus 171 ~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g 208 (236)
T 1elt_A 171 TMVCAGGGANSGCNGDSGGPLNCQVNGSYYVHGVTSFV 208 (236)
T ss_dssp TEEEECCSSCBCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred ceEEecCCCCccCCCCCCCeeEEEECCEEEEEEEEEEe
Confidence 11111 1233479999999854 57 899998754
No 268
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=96.00 E-value=0.058 Score=48.01 Aligned_cols=131 Identities=13% Similarity=0.081 Sum_probs=64.7
Q ss_pred EEEEecC-CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC---ceeeeeEEeeeeee---eccC
Q 017471 33 ATLVTAD-ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT---ISVTSGVVSRIEIL---SYVH 101 (371)
Q Consensus 33 ~vv~~d~-~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~---~s~t~G~Vs~~~~~---~~~~ 101 (371)
+-+..+| .+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... ....
T Consensus 75 ~~i~~hp~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 154 (234)
T 2asu_B 75 AKMVCGPSGSQLVLLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHR 154 (234)
T ss_dssp EEEEECSTTCCEEEEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTT
T ss_pred EEEecCCCCCCeEEEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccC
Confidence 3344555 4899999999753 33346677665432 34688999998643211 12222222221110 0010
Q ss_pred CCeEEeEEEE-----EeeccCCCCCCceecCC-C--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 102 GSTELLGLQI-----DAAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 102 ~~~~~~~i~~-----da~i~~G~SGGPlvn~~-G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
.......+-. ....-.|+|||||+-.+ | .++||.+....-......+....+....+++++.
T Consensus 155 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 224 (234)
T 2asu_B 155 GRVRESEMCTEGLLAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKV 224 (234)
T ss_dssp TCCCTTEEEECCCSSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CccCcceEeecCCCCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 0000011111 12334699999998543 3 7999986543221111223334444455555553
No 269
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=95.99 E-value=0.039 Score=48.12 Aligned_cols=105 Identities=17% Similarity=0.224 Sum_probs=64.5
Q ss_pred CCCEEEEEEecCCCcCCccceecCCCC-CCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCC
Q 017471 40 ICIYTMLTVEDDEFWEGVLPVEFGELP-ALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSG 118 (371)
Q Consensus 40 ~~DlAlLkv~~~~~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G 118 (371)
..|+++++++..+-+.++... |.+.. ...+.++++-.+ .....-+..|.+...+.. ...+......+..+++..+|
T Consensus 69 ~~Dlt~v~l~~~~kFRDIr~~-~~~~~~~~~~~~l~i~s~-~~~~~~~~v~~v~~~~~i-~l~g~~~~~~~~Y~~pT~~G 145 (190)
T 3zve_A 69 NLEITIVKLDRNQKFRDIRHF-LPRYEDDYNDAVLSVHTS-KFPNMYIPVGQVTNYGFL-NLGGTPTHRILMYNFPTRAG 145 (190)
T ss_dssp EEEEEEEEECCSSCBCCCGGG-SCSSCCCEEEEEEEECSS-SCSSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTT
T ss_pred eEEEEEEEcCCCcccCchHHh-ccccCCCCCCeEEEEECC-CCcceEEecccceEecee-ecCCCeeeeeEEEecCCCCC
Confidence 359999999876422344321 22222 333556666444 333334455666655532 22334445578999999999
Q ss_pred CCCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 119 NSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 119 ~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
.-||||+. +|+++||..+.- ...+||.+.
T Consensus 146 ~CG~~li~-~gkI~GiHvaG~-----G~~g~~~~l 174 (190)
T 3zve_A 146 QCGGVVTT-TGKVIGIHVGGN-----GAQGFAAML 174 (190)
T ss_dssp CTTCEEEE-TTEEEEEEEEEC-----SSCEEEEEC
T ss_pred ccCCeEEE-CCCEEEEEECcC-----CCceEehhh
Confidence 99999996 689999998852 334555443
No 270
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=95.99 E-value=0.079 Score=46.72 Aligned_cols=108 Identities=13% Similarity=0.099 Sum_probs=57.3
Q ss_pred EeEEEEEecC-------CCCEEEEEEecCC-CcCCccceecCCCC--CCCCeEEEEEeCCCCC----CceeeeeEEeeee
Q 017471 30 APSATLVTAD-------ICIYTMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPIGGD----TISVTSGVVSRIE 95 (371)
Q Consensus 30 ~~A~vv~~d~-------~~DlAlLkv~~~~-~~~~l~~~~l~~s~--~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~ 95 (371)
+..+-+..|| .+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..... ........+.-+.
T Consensus 68 ~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~ 147 (222)
T 1eq9_A 68 YDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHP 147 (222)
T ss_dssp EEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCCCCCCEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeC
Confidence 3444445555 3799999999763 33346777776543 3568888998864321 1111222222111
Q ss_pred eeecc---CCCeEEeEEEE----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 96 ILSYV---HGSTELLGLQI----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 96 ~~~~~---~~~~~~~~i~~----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
..... .+... ..+-. ....-.|+|||||+. +|.++||++...
T Consensus 148 ~~~C~~~~~~~~~-~~~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~ 196 (222)
T 1eq9_A 148 QKQCERDQWRVID-SHICTLTKRGEGACHGDSGGPLVA-NGAQIGIVSFGS 196 (222)
T ss_dssp HHHHHHHSSSCCT-TEEEECCCTTCBCCTTCTTCEEEE-TTEEEEEEEECS
T ss_pred HHHhCcccCCCCc-cEEeecCCCCCeeeeCCccceEEE-CCEEEEEEEECC
Confidence 10000 00000 01111 112347999999997 579999987643
No 271
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=95.97 E-value=0.061 Score=47.54 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=49.2
Q ss_pred CCEEEEEEecCC-CcCCccceecCCC---CCCCCeEEEEEeCCCCC----CceeeeeEEeeeeee----eccC-CCeEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGD----TISVTSGVVSRIEIL----SYVH-GSTELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s---~~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~----~~~~-~~~~~~ 107 (371)
+||||||++.+. +.+.+.|+.+... ...++.+.+.|+..... ........+.-+... .+.. ......
T Consensus 88 ~DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 167 (228)
T 2xw9_A 88 HDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITER 167 (228)
T ss_dssp TCCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTT
T ss_pred CcEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCC
Confidence 699999998653 2234556666542 23568888888854321 111111111111110 0110 000000
Q ss_pred EEEE---EeeccCCCCCCceecCCCcEEEEEeee
Q 017471 108 GLQI---DAAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 108 ~i~~---da~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
.+=. ....-.|+|||||+. +|.++||.+..
T Consensus 168 ~~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g 200 (228)
T 2xw9_A 168 LMCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSG 200 (228)
T ss_dssp EEEECCSSCBCCTTCTTCEEEE-TTEEEEEECCS
T ss_pred EEecCCCCCccCCCCCcccEEE-CCEEEEEEeec
Confidence 1111 123346999999997 57999998654
No 272
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=95.90 E-value=0.22 Score=44.43 Aligned_cols=99 Identities=14% Similarity=0.099 Sum_probs=51.2
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeeeeeecc----CCC-eEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYV----HGS-TELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~~~~----~~~-~~~~ 107 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... .+. ....
T Consensus 92 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~ 171 (241)
T 1bru_P 92 NDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTN 171 (241)
T ss_dssp CCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTT
T ss_pred CcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCc
Confidence 799999999753 33345666665432 3468889999854211 111222222222111000 000 0001
Q ss_pred EEEEE----eeccCCCCCCceecC--CC--cEEEEEeeec
Q 017471 108 GLQID----AAINSGNSGGPAFND--KG--KCVGIAFQSL 139 (371)
Q Consensus 108 ~i~~d----a~i~~G~SGGPlvn~--~G--~VIGI~~~~~ 139 (371)
.+=.. ...-.|+|||||+-. +| .++||++...
T Consensus 172 ~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~ 211 (241)
T 1bru_P 172 MICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGS 211 (241)
T ss_dssp EEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECB
T ss_pred eEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcC
Confidence 11111 123469999999853 56 8999987643
No 273
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=95.86 E-value=0.057 Score=47.83 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=50.6
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... ...........+
T Consensus 87 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~ 166 (227)
T 1euf_A 87 NDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQI 166 (227)
T ss_dssp TCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEE
T ss_pred CceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEE
Confidence 699999998653 33346666665432 34688999998542211 11222222211110 000000000011
Q ss_pred EEE-----eeccCCCCCCceecCCCcEEEEEeee
Q 017471 110 QID-----AAINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 110 ~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
=.. .....|+|||||+. +|.++||++..
T Consensus 167 Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~g 199 (227)
T 1euf_A 167 CAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYG 199 (227)
T ss_dssp EESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred EccCCCCCCcccccCCCCceEE-CCEEEEEEEEe
Confidence 110 11127999999997 57999998764
No 274
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=95.86 E-value=0.058 Score=48.54 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=61.2
Q ss_pred CCEEEEEEecCC-CcCCccceecCCC-------CCCCCeEEEEEeCCCCCC---c------eeeee---EEeeeeeeecc
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGEL-------PALQDAVTVVGYPIGGDT---I------SVTSG---VVSRIEILSYV 100 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s-------~~lgd~V~~iG~p~g~~~---~------s~t~G---~Vs~~~~~~~~ 100 (371)
+||||||++.+. |.+.+.|+.+... ...++.+.+.|+...... . ..... +++...-....
T Consensus 87 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~ 166 (250)
T 1aut_C 87 NDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVM 166 (250)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHC
T ss_pred CcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHh
Confidence 699999999753 2234556666532 245788999998643211 0 11111 22211100000
Q ss_pred CCCeEEeEEEE-----EeeccCCCCCCceec-CCCc--EEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 101 HGSTELLGLQI-----DAAINSGNSGGPAFN-DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 101 ~~~~~~~~i~~-----da~i~~G~SGGPlvn-~~G~--VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
........+=. ....-.|+|||||+. .+|+ ++||++...........+...-+....+++++..
T Consensus 167 ~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 238 (250)
T 1aut_C 167 SNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHI 238 (250)
T ss_dssp SSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHH
T ss_pred ccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 00000011111 123457999999985 4565 9999876432211122233344555556665543
No 275
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=95.85 E-value=0.089 Score=46.92 Aligned_cols=134 Identities=15% Similarity=0.073 Sum_probs=67.9
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCCC---ceee---eeEEeee
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGDT---ISVT---SGVVSRI 94 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~~---~s~t---~G~Vs~~ 94 (371)
+..+-+..||. +||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .... .-+++.-
T Consensus 85 ~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~ 164 (251)
T 3gov_B 85 LGVKHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHS 164 (251)
T ss_dssp ECEEEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHH
T ss_pred eeeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHH
Confidence 34445566664 699999998653 33345666665443 46788999998643211 1112 2222211
Q ss_pred eeee-ccC--CCeEEeEEEE-----EeeccCCCCCCceecC---CC--cEEEEEeeecccCCccceeccccCcchhHhHh
Q 017471 95 EILS-YVH--GSTELLGLQI-----DAAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQ 161 (371)
Q Consensus 95 ~~~~-~~~--~~~~~~~i~~-----da~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~ 161 (371)
.-.. +.. .......+=. ....-.|+|||||+-. +| .++||.+...........+....+....++++
T Consensus 165 ~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~ 244 (251)
T 3gov_B 165 TCQKAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQ 244 (251)
T ss_dssp HHHHHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHH
T ss_pred HhhhhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHH
Confidence 1000 100 0000011111 1234479999999853 35 69999876532221122233444555566665
Q ss_pred hh
Q 017471 162 DY 163 (371)
Q Consensus 162 ~L 163 (371)
+.
T Consensus 245 ~~ 246 (251)
T 3gov_B 245 RV 246 (251)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 276
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=95.79 E-value=0.1 Score=46.30 Aligned_cols=99 Identities=12% Similarity=0.097 Sum_probs=52.6
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeeeeeecc------CCCe-
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYV------HGST- 104 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~~~~------~~~~- 104 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... ....
T Consensus 84 ~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 163 (234)
T 1orf_A 84 EGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVI 163 (234)
T ss_dssp TTCCEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCC
T ss_pred CCCEEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCcc
Confidence 3699999998653 22345666665433 3568899999854211 111222222222211010 0000
Q ss_pred EEeEEEE-----EeeccCCCCCCceecCCCcEEEEEeeec
Q 017471 105 ELLGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 105 ~~~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
....+-. ....-.|+|||||+- +|.++||.+...
T Consensus 164 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~ 202 (234)
T 1orf_A 164 GMNMVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGL 202 (234)
T ss_dssp CTTEEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECC
T ss_pred CCCEEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcC
Confidence 0011111 123347999999997 679999987643
No 277
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=95.79 E-value=0.064 Score=46.60 Aligned_cols=95 Identities=20% Similarity=0.281 Sum_probs=60.2
Q ss_pred CCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCC
Q 017471 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNS 120 (371)
Q Consensus 41 ~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~S 120 (371)
.||++++++..+-+.++...=..+.+...+-++++-.+ ......+..|.+...+.. ...+......+..+++-.+|.-
T Consensus 77 lElt~V~l~r~~kFRDIr~fi~~~~~~~~~~~L~vn~~-~~~~~~~~vg~v~~~g~i-~lsg~~t~r~l~Y~~pT~~G~C 154 (190)
T 4dcd_A 77 LEITIITLKRNEKFRDIRPHIPTQITETNDGVLIVNTS-KYPNMYVPVGAVTEQGYL-NLGGRQTARTLMYNFPTRAGQC 154 (190)
T ss_dssp EEEEEEEESSSCCBCCCGGGSCSSCCCEEEEEEEECSS-SSTTEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTTCT
T ss_pred EEEEEEEcCCCccccchhHhccccCCCCCceEEEEecC-CCccEEEEeeeeEEeccc-cCCCCcccceEEEccCCCCCcc
Confidence 69999999977533344321111212222445555433 333334556766666543 2234444567899999999999
Q ss_pred CCceecCCCcEEEEEeee
Q 017471 121 GGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 121 GGPlvn~~G~VIGI~~~~ 138 (371)
||||+. +|+++||..+.
T Consensus 155 Gg~l~~-~gkIlGIHvaG 171 (190)
T 4dcd_A 155 GGVITC-TGKVIGMHVGG 171 (190)
T ss_dssp TCEEEE-TTEEEEEEEEE
T ss_pred CCEEEe-CCCEEEEEECC
Confidence 999996 68999999885
No 278
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=95.68 E-value=0.14 Score=45.64 Aligned_cols=129 Identities=9% Similarity=0.076 Sum_probs=64.5
Q ss_pred ecC-CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC---ceeeeeEEeeeeeeec---cCCC--
Q 017471 37 TAD-ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSY---VHGS-- 103 (371)
Q Consensus 37 ~d~-~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~---~s~t~G~Vs~~~~~~~---~~~~-- 103 (371)
.++ .+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+..... ....
T Consensus 78 ~~p~~~DiALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 157 (240)
T 1si5_H 78 YGPEGSDLVLMKLARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVT 157 (240)
T ss_dssp ECSSTTCEEEEEESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------
T ss_pred cCCCCCcEEEEEECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCcc
Confidence 455 5899999999753 22345666665432 34688999998643211 1122222222211100 0000
Q ss_pred eEEeEEEE-----EeeccCCCCCCceecCCC---cEEEEEeeecccCCccceeccccCcchhHhHhhhhh
Q 017471 104 TELLGLQI-----DAAINSGNSGGPAFNDKG---KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 104 ~~~~~i~~-----da~i~~G~SGGPlvn~~G---~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
.....+=. ....-.|+|||||+-.++ .++||.+...........+....+....+++++...
T Consensus 158 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 158 LNESEICAGAEKIGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp CCTTEEEEECSSSCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCEEeecCCCCCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 00001111 123346999999986443 899998754322111222333445556666666543
No 279
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=95.63 E-value=0.079 Score=46.93 Aligned_cols=108 Identities=12% Similarity=0.102 Sum_probs=55.4
Q ss_pred EEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeeee
Q 017471 32 SATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIEI 96 (371)
Q Consensus 32 A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~ 96 (371)
.+-+..||. +|+||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+..
T Consensus 75 v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~ 154 (235)
T 4dgj_A 75 IDEIVINPHYNRRRKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSN 154 (235)
T ss_dssp EEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECH
T ss_pred EEEEEECCCCCCCCCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCH
Confidence 344455664 699999998653 33345677775433 3468899999853211 11112222221111
Q ss_pred ---eeccCC-CeEEeEEEE-----EeeccCCCCCCceecC-CCc--EEEEEeeec
Q 017471 97 ---LSYVHG-STELLGLQI-----DAAINSGNSGGPAFND-KGK--CVGIAFQSL 139 (371)
Q Consensus 97 ---~~~~~~-~~~~~~i~~-----da~i~~G~SGGPlvn~-~G~--VIGI~~~~~ 139 (371)
...... ......+=. ....-.|+|||||+-. +|+ ++||.+...
T Consensus 155 ~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~ 209 (235)
T 4dgj_A 155 ERCQQQMPEYNITENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGY 209 (235)
T ss_dssp HHHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred HHhhhhccCccCCCCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcC
Confidence 000000 000011111 1133579999999854 453 999987654
No 280
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=95.53 E-value=0.19 Score=44.61 Aligned_cols=99 Identities=17% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC----CceeeeeEEeeeeee----eccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD----TISVTSGVVSRIEIL----SYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~----~~~~~~~~~~~i~ 110 (371)
+|+||||++.+. |.+.+.|+.+.+.. ..++.+.+.|+..... ........+.-+... .+.........+=
T Consensus 95 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~C 174 (237)
T 2f91_A 95 NDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMIC 174 (237)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEE
T ss_pred CcEEEEEECCCcccCCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEE
Confidence 699999999753 33346677776543 4578899999854321 111222222211110 0110000001111
Q ss_pred E-----EeeccCCCCCCceecCCC---cEEEEEeeec
Q 017471 111 I-----DAAINSGNSGGPAFNDKG---KCVGIAFQSL 139 (371)
Q Consensus 111 ~-----da~i~~G~SGGPlvn~~G---~VIGI~~~~~ 139 (371)
. ....-.|+|||||+-.++ .++||++...
T Consensus 175 a~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~ 211 (237)
T 2f91_A 175 AGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGY 211 (237)
T ss_dssp ECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEES
T ss_pred EecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecC
Confidence 1 123457999999986443 7999987653
No 281
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=95.50 E-value=0.056 Score=47.89 Aligned_cols=98 Identities=16% Similarity=0.134 Sum_probs=51.8
Q ss_pred CCEEEEEEecCCCcCCccceecCCCC-----CCCCeEEEEEeCCCCCC-ceeeeeEEeeeeee----eccCCCeEEeEEE
Q 017471 41 CIYTMLTVEDDEFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGDT-ISVTSGVVSRIEIL----SYVHGSTELLGLQ 110 (371)
Q Consensus 41 ~DlAlLkv~~~~~~~~l~~~~l~~s~-----~lgd~V~~iG~p~g~~~-~s~t~G~Vs~~~~~----~~~~~~~~~~~i~ 110 (371)
+||||||+++..+.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... .+.........+-
T Consensus 87 ~DiALl~L~~~~~~~~v~picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~C 166 (230)
T 2hlc_A 87 NDVALIKIPHVEYTDNIQPIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTIC 166 (230)
T ss_dssp TCCEEEECSCCCCCSSCCCCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEE
T ss_pred ccEEEEEecCCCcCCcEeeeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEE
Confidence 79999999844444456777765432 24688899998653221 11222222211110 0110000001111
Q ss_pred E----EeeccCCCCCCceec-CCCcEEEEEeee
Q 017471 111 I----DAAINSGNSGGPAFN-DKGKCVGIAFQS 138 (371)
Q Consensus 111 ~----da~i~~G~SGGPlvn-~~G~VIGI~~~~ 138 (371)
. ....-.|+|||||+- .++.++||.+..
T Consensus 167 a~~~~~~~~C~GDSGgPl~~~~~~~l~Gi~S~g 199 (230)
T 2hlc_A 167 GDTSDGKSPCFGDSGGPFVLSDKNLLIGVVSFV 199 (230)
T ss_dssp ECCTTSCBCCTTCTTCEEEEGGGTEEEEEEEEC
T ss_pred ecCCCCCCcCCCCCCCeeEECcCCEEEEEEEEe
Confidence 1 123447999999984 456999998754
No 282
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=95.47 E-value=0.0071 Score=49.05 Aligned_cols=66 Identities=8% Similarity=0.012 Sum_probs=50.6
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCChH
Q 017471 252 KYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCI 331 (371)
Q Consensus 252 ~~~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~ 331 (371)
..+|++++++|+|+|+.+++++++... . .+|+.+... .+...+++|..+.++|||
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~~~-----------~-----~lG~~~~~~---------~~~~~gv~V~~V~~~spA 59 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLGDG-----------R-----SLGLTIRGG---------AEYGLGIYITGVDPGSEA 59 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECCSS-----------C-----CCCEEEECC---------TTTTCCCEEEEECTTCHH
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEECCC-----------C-----ccCEEEECc---------ccCCCCEEEEEECCCCHH
Confidence 468999999999999999999888532 0 268876442 111248999999999999
Q ss_pred hHHhhhhhhhH
Q 017471 332 QCHNCQMSSLL 342 (371)
Q Consensus 332 ~~~~~~~~~~~ 342 (371)
+..-...+|+|
T Consensus 60 ~~aGL~~GD~I 70 (128)
T 1uf1_A 60 EGSGLKVGDQI 70 (128)
T ss_dssp HHHTCCTTCEE
T ss_pred HHCCCCCCCEE
Confidence 99888888876
No 283
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=95.46 E-value=0.13 Score=45.87 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=57.0
Q ss_pred EeEEEEEecCCC---------CEEEEEEecCC-CcCCccceecCCC-C--CCCCeEEEEEeCCCCCC----ceeeeeEEe
Q 017471 30 APSATLVTADIC---------IYTMLTVEDDE-FWEGVLPVEFGEL-P--ALQDAVTVVGYPIGGDT----ISVTSGVVS 92 (371)
Q Consensus 30 ~~A~vv~~d~~~---------DlAlLkv~~~~-~~~~l~~~~l~~s-~--~lgd~V~~iG~p~g~~~----~s~t~G~Vs 92 (371)
+..+-+.+||.+ ||||||++.+. |.+.+.|+.+... . ..++.+.+.|+...... .......+.
T Consensus 72 ~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~ 151 (241)
T 1m9u_A 72 ANVDSYTMHENYGAGTASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIP 151 (241)
T ss_dssp EEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCCSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEE
T ss_pred EEEEEEEeCCCcCCCCCcccccEEEEEecCccccCCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEE
Confidence 344555566654 99999999653 3334566666543 2 25688999998543211 112222222
Q ss_pred eeeee---e-ccC-CC--eEEeEEEE-----EeeccCCCCCCceecCCC--cEEEEEee
Q 017471 93 RIEIL---S-YVH-GS--TELLGLQI-----DAAINSGNSGGPAFNDKG--KCVGIAFQ 137 (371)
Q Consensus 93 ~~~~~---~-~~~-~~--~~~~~i~~-----da~i~~G~SGGPlvn~~G--~VIGI~~~ 137 (371)
-+... . +.. .. .....+=. ....-.|+|||||+-.+| .++||.+.
T Consensus 152 ~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~l~Gi~S~ 210 (241)
T 1m9u_A 152 VITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCPDGGTRVVGVTSW 210 (241)
T ss_dssp BCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBCCTTCTTCEEEEESSSEEEEEEEEE
T ss_pred EEcHHHhhhhhcccCCCcccCCcEEECcCCCCCeeecCcCCccEEEeCCCEEEEEEEEE
Confidence 11110 0 110 00 00011111 123457999999986545 89999876
No 284
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=95.40 E-value=0.22 Score=44.51 Aligned_cols=122 Identities=16% Similarity=0.171 Sum_probs=59.8
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee---e-cc--CCCeE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL---S-YV--HGSTE 105 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~---~-~~--~~~~~ 105 (371)
+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... . +. .....
T Consensus 101 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 180 (245)
T 1t8o_A 101 NDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAM 180 (245)
T ss_dssp SCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTE
T ss_pred CCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCce
Confidence 699999999763 33345666665432 35788999998643211 01122222211110 0 00 00111
Q ss_pred EeEEE-EEeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 106 LLGLQ-IDAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 106 ~~~i~-~da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
+ +.. .....-.|+|||||+-. +| .++||++...........+....+....+++++.
T Consensus 181 ~-Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 241 (245)
T 1t8o_A 181 I-CAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQT 241 (245)
T ss_dssp E-EEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHH
T ss_pred E-EccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHH
Confidence 1 111 11233479999999854 45 7999987643211111223333444455555543
No 285
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=95.34 E-value=0.36 Score=42.58 Aligned_cols=99 Identities=15% Similarity=0.142 Sum_probs=51.5
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeeeeeecc-----CCCeEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYV-----HGSTELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~~~~-----~~~~~~~ 107 (371)
+|+||||++.+. |.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... .......
T Consensus 85 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 164 (232)
T 2oq5_A 85 YDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPR 164 (232)
T ss_dssp TCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTT
T ss_pred CCEEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCC
Confidence 699999999763 33345666665432 3478899999854211 111222222222111000 0000001
Q ss_pred EEEEE-----eeccCCCCCCceecCC--C--cEEEEEeeec
Q 017471 108 GLQID-----AAINSGNSGGPAFNDK--G--KCVGIAFQSL 139 (371)
Q Consensus 108 ~i~~d-----a~i~~G~SGGPlvn~~--G--~VIGI~~~~~ 139 (371)
.+=.. ...-.|+|||||+..+ | .++||.+...
T Consensus 165 ~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~ 205 (232)
T 2oq5_A 165 MLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGD 205 (232)
T ss_dssp EEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECS
T ss_pred EEeecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCC
Confidence 11111 2344799999998543 3 6999987643
No 286
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=95.33 E-value=0.23 Score=42.80 Aligned_cols=104 Identities=14% Similarity=0.152 Sum_probs=61.4
Q ss_pred CCEEEEEEecCCCcCCccceecCCCCCC-CCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCC
Q 017471 41 CIYTMLTVEDDEFWEGVLPVEFGELPAL-QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 119 (371)
Q Consensus 41 ~DlAlLkv~~~~~~~~l~~~~l~~s~~l-gd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~ 119 (371)
.|+++++++..+-+.++.. -+.++... .+ ...+-+.......-+..|.+...+.... .+......+..++|-.+|.
T Consensus 70 ~El~lv~l~~~~kfrDi~k-fip~~~~~~~~-~~l~~n~~~~~~~~v~~g~~~~~g~i~~-~g~~~~r~l~Y~~pT~~G~ 146 (180)
T 1cqq_A 70 LEITVLKLDRNEKFRDIRR-YIPNNEDDYPN-CNLALLANQPEPTIINVGDVVSYGNILL-SGNQTARMLKYSYPTKSGY 146 (180)
T ss_dssp EEEEEEEECSSCCBCCGGG-GSCSSCCCEEE-EEEEECTTSSSCEEEEEEEEEECCCEEE-TTEEECSEEEECCCCCTTC
T ss_pred EEEEEEEcCCccccCccHh-hcCCCcCCCCc-eEEEEEcCCCceEEEEccceeeeeeEec-CCcEeccEEEecCCCCCCc
Confidence 7999999986652233332 12222221 23 3333333322222366676666443221 2333345789999999999
Q ss_pred CCCceecCCCcEEEEEeeecccCCccceeccccC
Q 017471 120 SGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
-||+++.. |+++||..+. ....+||.+.
T Consensus 147 CGsvl~~~-gkIiGIHvAG-----~G~~G~aa~l 174 (180)
T 1cqq_A 147 CGGVLYKI-GQVLGIHVGG-----NGRDGFSAML 174 (180)
T ss_dssp TTCEEEET-TEEEEEEEEE-----CSSCEEEEEC
T ss_pred CCCeEEEC-CCEEEEEECC-----CCCcEEEeee
Confidence 99999975 6999999985 2345565543
No 287
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=95.25 E-value=0.14 Score=45.53 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=65.3
Q ss_pred EEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCC---CCCCCeEEEEEeCCCCCC----ceeeeeEEeeeee
Q 017471 32 SATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT----ISVTSGVVSRIEI 96 (371)
Q Consensus 32 A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s---~~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~ 96 (371)
.+-+.+||. +||||||++.+. +.+.+.|+.+... ...++.+.+.|+...... .......+.-+..
T Consensus 76 v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~ 155 (241)
T 2any_A 76 IKEIIIHQNYKVSEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTN 155 (241)
T ss_dssp EEEEEECTTCCTTSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECH
T ss_pred eEEEEECCCCCCCCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCH
Confidence 344555653 699999998653 3234566666543 245688999998643211 1112222221111
Q ss_pred e----eccCCCeEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 97 L----SYVHGSTELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 97 ~----~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
. .+.........+=. ....-.|+|||||+-. +| .++||.+...........+...-+....+++.+.
T Consensus 156 ~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 234 (241)
T 2any_A 156 EECQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEK 234 (241)
T ss_dssp HHHHTTSCTTCSCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred HHhhhHhccCCCCcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 0 01000000011111 1234579999999854 45 6999987644221112223334444555565554
No 288
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=95.21 E-value=0.4 Score=43.36 Aligned_cols=49 Identities=20% Similarity=0.274 Sum_probs=27.0
Q ss_pred cCCCCCCceec-CCCc--EEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 116 NSGNSGGPAFN-DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 116 ~~G~SGGPlvn-~~G~--VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
-.|+|||||+- .+|+ ++||++...........+...-+....+++++..
T Consensus 217 C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~WI~~~~ 268 (276)
T 2vnt_A 217 CQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 268 (276)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 46999999884 4444 9999875432211111122233444556665543
No 289
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=95.18 E-value=0.23 Score=45.07 Aligned_cols=123 Identities=16% Similarity=0.176 Sum_probs=60.6
Q ss_pred CCEEEEEEecC-----CCcCCccceecCCC---CCCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeeeecc----CCC
Q 017471 41 CIYTMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILSYV----HGS 103 (371)
Q Consensus 41 ~DlAlLkv~~~-----~~~~~l~~~~l~~s---~~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~~~~----~~~ 103 (371)
+||||||++.+ .+.+.+.|+.+... ...++.+.+.|+...... .......+.-+...... .+.
T Consensus 119 ~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 198 (276)
T 2jde_A 119 NDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGS 198 (276)
T ss_dssp SCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGG
T ss_pred CcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCc
Confidence 49999999865 23345666666432 245788999998643211 11222222222111000 000
Q ss_pred -eEEeEEEE-----EeeccCCCCCCceec-CCC--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 104 -TELLGLQI-----DAAINSGNSGGPAFN-DKG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 104 -~~~~~i~~-----da~i~~G~SGGPlvn-~~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
.....+=. ....-.|+|||||+- .+| .++||.+...........+....+....+++++.
T Consensus 199 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 267 (276)
T 2jde_A 199 EVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 267 (276)
T ss_dssp GSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHT
T ss_pred cCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 00011111 123347999999985 345 4999987653221111223334444555565553
No 290
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=95.16 E-value=0.075 Score=47.05 Aligned_cols=122 Identities=14% Similarity=0.106 Sum_probs=61.2
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeee---eccCCCeEEeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEIL---SYVHGSTELLGL 109 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~---~~~~~~~~~~~i 109 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... .... ......+
T Consensus 85 ~~DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~ 163 (226)
T 1azz_A 85 SNDIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG-IVTDGNI 163 (226)
T ss_dssp BSCCEEEECSSCCCCCSSSCCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS-CCCTTEE
T ss_pred CCceEEEEECCccccCCCcccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC-cCCCceE
Confidence 3799999998653 22345666665433 4678899999864321 101111212111110 0000 0000011
Q ss_pred EE----EeeccCCCCCCceecCCCcEEEEEeeecccC-CccceeccccCcchhHhHhhh
Q 017471 110 QI----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 110 ~~----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aiP~~~i~~~l~~L 163 (371)
-. ....-.|+|||||+. +|.++||.+...... +....+....+....+++++.
T Consensus 164 Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~ 221 (226)
T 1azz_A 164 CIDSTGGKGTCNGDSGGPLNY-NGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQ 221 (226)
T ss_dssp EECCTTTCBCCTTCTTCEEEE-TTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHH
T ss_pred eecCCCCCccCCCCCCcceEE-CCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHH
Confidence 11 123347999999995 789999987654111 111122234444555555553
No 291
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=94.99 E-value=0.16 Score=45.67 Aligned_cols=49 Identities=12% Similarity=0.102 Sum_probs=31.6
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
..+-+..||. +||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..
T Consensus 72 ~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 131 (261)
T 3gyl_B 72 TLKDIIPHPSYLQEGSQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGH 131 (261)
T ss_dssp CEEEEEECTTCCSTTCSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred EEEEEEECCCcCCCCCCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCC
Confidence 3344556664 599999998653 33346666664322 3568899999864
No 292
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=94.94 E-value=0.09 Score=46.53 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=59.2
Q ss_pred EecCC---CCEEEEEEecCCCcCCccceecCCCCC-CC-CeEEEEEeCCCCCCceeeeeEEeeeeeee-ccCCCeEEeEE
Q 017471 36 VTADI---CIYTMLTVEDDEFWEGVLPVEFGELPA-LQ-DAVTVVGYPIGGDTISVTSGVVSRIEILS-YVHGSTELLGL 109 (371)
Q Consensus 36 ~~d~~---~DlAlLkv~~~~~~~~l~~~~l~~s~~-lg-d~V~~iG~p~g~~~~s~t~G~Vs~~~~~~-~~~~~~~~~~i 109 (371)
.+|.+ .||++++++..+-+.+++.. |.+... .. +.+..+-++..... ....|.+....... ...+......+
T Consensus 76 ~v~~~~~~~Dl~~~~l~~~~kfrdi~k~-f~~~~~~~~~~~~~~~~n~~~~~~-~~~~g~~~~~~~~~~~~~G~~~~~~~ 153 (209)
T 2bhg_A 76 KVKGQDMLSDAALMVLHRGNKVRDITKH-FRDTARMKKGTPVVGVVNNADVGR-LIFSGEALTYKDIVVSMDGDTMPGLF 153 (209)
T ss_dssp CCSSSCEECSEEEEEESSSCCBCCCGGG-BCSSCEECTTCEEEEEEEETTTEE-EEEEEEESSCEECCC-----CCTTEE
T ss_pred eecCCCCceeEEEEECCCCcccCchhhh-cccccccCCCCeEEEEeccCccCc-eeeeeeEEEccceeeecCCCccccEE
Confidence 34554 89999999866422333321 222222 23 55776777754322 34455554443211 11122222468
Q ss_pred EEEeeccCCCCCCceec---CCCcEEEEEeee
Q 017471 110 QIDAAINSGNSGGPAFN---DKGKCVGIAFQS 138 (371)
Q Consensus 110 ~~da~i~~G~SGGPlvn---~~G~VIGI~~~~ 138 (371)
..+++-.+|.-||+|+- ..|+++||..+.
T Consensus 154 ~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG 185 (209)
T 2bhg_A 154 AYKAATRAGYAGGAVLAKDGADTFIVGTHSAG 185 (209)
T ss_dssp EEECCCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred EEcCCCCCCcCCCEEEEecCCCceEEEEEEcc
Confidence 89999999999999864 379999999985
No 293
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=94.92 E-value=0.24 Score=44.16 Aligned_cols=125 Identities=14% Similarity=0.129 Sum_probs=61.9
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeee---e--ccCCCeEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEIL---S--YVHGSTEL 106 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~---~--~~~~~~~~ 106 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... . ........
T Consensus 84 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 163 (240)
T 2zgc_A 84 ENDLALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSP 163 (240)
T ss_dssp BSCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCT
T ss_pred cccEEEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCC
Confidence 4699999998653 22345666665433 35688999998543211 11122222211111 0 11110000
Q ss_pred eEEEEE-----eeccCCCCCCceecCC-CcEEEEEeeec-ccCCccceeccccCcchhHhHhhhh
Q 017471 107 LGLQID-----AAINSGNSGGPAFNDK-GKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 107 ~~i~~d-----a~i~~G~SGGPlvn~~-G~VIGI~~~~~-~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
..+-.. ...-.|+|||||+-.+ ..++||++... .-......+....+....+++++..
T Consensus 164 ~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 228 (240)
T 2zgc_A 164 SMVCLAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVT 228 (240)
T ss_dssp TEEEEECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHH
T ss_pred ceEeeccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 112111 2334799999998633 38999986541 1111112233344555666666654
No 294
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=94.89 E-value=0.19 Score=44.58 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=51.9
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC--CCCCeEEEEEeCCCCCC-----ceeeeeEEeeeeee----eccCCCeEEe
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEIL----SYVHGSTELL 107 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~--~lgd~V~~iG~p~g~~~-----~s~t~G~Vs~~~~~----~~~~~~~~~~ 107 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... .+........
T Consensus 89 ~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 168 (238)
T 1ym0_A 89 ENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDD 168 (238)
T ss_dssp TTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTT
T ss_pred cccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCC
Confidence 3699999998653 33346677665433 25688889998543211 11222222211110 0110000001
Q ss_pred EEEEE-------eeccCCCCCCceecC--CC--cEEEEEeeec
Q 017471 108 GLQID-------AAINSGNSGGPAFND--KG--KCVGIAFQSL 139 (371)
Q Consensus 108 ~i~~d-------a~i~~G~SGGPlvn~--~G--~VIGI~~~~~ 139 (371)
.+=.. ...-.|+|||||+-. +| .++||.+...
T Consensus 169 ~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~ 211 (238)
T 1ym0_A 169 MICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGI 211 (238)
T ss_dssp EEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECS
T ss_pred eEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECC
Confidence 11111 234579999999854 35 6999987643
No 295
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=94.88 E-value=0.15 Score=45.57 Aligned_cols=39 Identities=13% Similarity=0.114 Sum_probs=26.0
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p~ 79 (371)
+||||||++.+. +.+.+.|+.+.... ..+..+.+.|+..
T Consensus 98 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~ 143 (259)
T 3rm2_H 98 RDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGN 143 (259)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCC
T ss_pred CcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCC
Confidence 599999999653 33345666664422 3468888888864
No 296
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=94.87 E-value=0.19 Score=44.91 Aligned_cols=125 Identities=15% Similarity=0.126 Sum_probs=63.5
Q ss_pred CCCEEEEEEecC-----CCcCCccceecCCCC---CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeeeecc----CC
Q 017471 40 ICIYTMLTVEDD-----EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYV----HG 102 (371)
Q Consensus 40 ~~DlAlLkv~~~-----~~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~~~~----~~ 102 (371)
.+||||||++.+ .|.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... .+
T Consensus 88 ~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 167 (248)
T 2r0l_A 88 DHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYG 167 (248)
T ss_dssp TTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTG
T ss_pred CCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccC
Confidence 469999999875 333456677765422 3578899999854321 112222222222211100 00
Q ss_pred C-eEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 103 S-TELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 103 ~-~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
. .....+=. ....-.|+|||||+.. +| .++||++...........+....+....+++++..
T Consensus 168 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 238 (248)
T 2r0l_A 168 ADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 238 (248)
T ss_dssp GGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 0 00011111 1234579999999854 46 59999876532211122233344555566665543
No 297
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=94.80 E-value=0.58 Score=41.68 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=26.2
Q ss_pred CCEEEEEEecC-----CCcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDD-----EFWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~-----~~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
+||||||++.+ .+.+.+.|+.+.... ..++.+.+.|+..
T Consensus 95 ~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 141 (252)
T 1rtf_B 95 NDIALLQLKSDSSRCAQESSVVRTVCLPPADLQLPDWTECELSGYGK 141 (252)
T ss_dssp TCCEEEEECCSSSCCSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCEEEEEECCccccccccCCceeceeCCCccccCCCCCEEEEEEcCC
Confidence 69999999865 233345666665432 2457888988854
No 298
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=94.63 E-value=0.34 Score=42.76 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=27.6
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-----CCCCeEEEEEeCC
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPI 79 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-----~lgd~V~~iG~p~ 79 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..
T Consensus 86 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~ 131 (242)
T 3tvj_B 86 DNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGL 131 (242)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCC
T ss_pred cCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCC
Confidence 3699999999653 33456677775432 3568899999854
No 299
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=94.61 E-value=0.16 Score=47.40 Aligned_cols=106 Identities=13% Similarity=-0.020 Sum_probs=54.6
Q ss_pred eEEEEEecC-------CCCEEEEEEecCC-CcCCccceecCCC------CCCCCeEEEEEeCCCCC-----CceeeeeEE
Q 017471 31 PSATLVTAD-------ICIYTMLTVEDDE-FWEGVLPVEFGEL------PALQDAVTVVGYPIGGD-----TISVTSGVV 91 (371)
Q Consensus 31 ~A~vv~~d~-------~~DlAlLkv~~~~-~~~~l~~~~l~~s------~~lgd~V~~iG~p~g~~-----~~s~t~G~V 91 (371)
..+-+.+|| .+||||||++.+. |.+.+.|+.+... ...++.+.+.|+..... ...+..-++
T Consensus 160 ~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~ 239 (317)
T 3h5c_B 160 KITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLV 239 (317)
T ss_dssp EEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEE
T ss_pred EeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEE
Confidence 344455565 3699999998653 2334566666543 23568888988853111 112222333
Q ss_pred eeeeee-eccC--CCeEEeEEEEEeeccCCCCCCceec-CCCc--EEEEEee
Q 017471 92 SRIEIL-SYVH--GSTELLGLQIDAAINSGNSGGPAFN-DKGK--CVGIAFQ 137 (371)
Q Consensus 92 s~~~~~-~~~~--~~~~~~~i~~da~i~~G~SGGPlvn-~~G~--VIGI~~~ 137 (371)
+...-. .+.. ....+ ..........|+|||||+- .+|+ ++||++.
T Consensus 240 ~~~~C~~~~~~~~~~~~~-Ca~~~~~~~~gDsGgPl~~~~~~~~~l~Gi~S~ 290 (317)
T 3h5c_B 240 EGEECGQVLNVTVTTRTY-CERSSVAAMHWMDGSVVTREHRGSWFLTGVLGS 290 (317)
T ss_dssp CHHHHHHHHTCCCCTTEE-EEECSCCCCCCCTTCEEEEEETTEEEEEEEECC
T ss_pred CHHHHhhhhcCcCCCcee-ECCCCCCCcCCCCCCCEEEecCCEEEEEEEEEE
Confidence 221100 0100 01111 1111222347899999985 4565 9999854
No 300
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=94.59 E-value=0.39 Score=42.58 Aligned_cols=109 Identities=16% Similarity=0.154 Sum_probs=55.1
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeee---eEEe
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTS---GVVS 92 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~---G~Vs 92 (371)
..+-+..||. +||||||++.+. +.+...|+.+.... ..++.+.+.|+...... ..... -+++
T Consensus 75 ~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~ 154 (238)
T 3bg8_A 75 GVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVT 154 (238)
T ss_dssp EEEEEEECTTCCCGGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEEC
T ss_pred eeEEEEECCCCCCCCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEEC
Confidence 3444556653 699999998653 32345666665432 34688888888532211 01111 1222
Q ss_pred eeeee-eccCCCeEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeec
Q 017471 93 RIEIL-SYVHGSTELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSL 139 (371)
Q Consensus 93 ~~~~~-~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~ 139 (371)
.-.-. .+.........+=. ....-.|+|||||+-. +| .++||++...
T Consensus 155 ~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 210 (238)
T 3bg8_A 155 NEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGE 210 (238)
T ss_dssp HHHHHHHCTTSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred HHHhhhhhcCCCCCCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECC
Confidence 11100 01100000011111 1234479999999854 45 5999987643
No 301
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=94.44 E-value=0.43 Score=42.60 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=53.2
Q ss_pred EEecC-CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC---C---ceeeeeEEeeeeeeec--cC
Q 017471 35 LVTAD-ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---T---ISVTSGVVSRIEILSY--VH 101 (371)
Q Consensus 35 v~~d~-~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~---~---~s~t~G~Vs~~~~~~~--~~ 101 (371)
+..++ .+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... . ..+..-+++...-..+ ..
T Consensus 94 ~~~hp~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~ 173 (247)
T 1ddj_A 94 LFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLN 173 (247)
T ss_dssp EEECTTSCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTT
T ss_pred EEcCCCCCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccC
Confidence 34454 4899999999763 33345666665432 3467888888854321 1 1112222221111111 01
Q ss_pred CCeEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeec
Q 017471 102 GSTELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSL 139 (371)
Q Consensus 102 ~~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~ 139 (371)
.......+=. ....-.|+|||||+-. +| .++||++...
T Consensus 174 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 219 (247)
T 1ddj_A 174 GRVQSTELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGL 219 (247)
T ss_dssp TCCCTTEEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGG
T ss_pred CCCcCCeEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECC
Confidence 1000011111 1233579999999853 34 5999987543
No 302
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=94.41 E-value=0.64 Score=41.55 Aligned_cols=98 Identities=12% Similarity=0.122 Sum_probs=50.2
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeee----ccCC-CeEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILS----YVHG-STELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~----~~~~-~~~~~ 107 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+.... +..+ .....
T Consensus 104 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 183 (251)
T 1pyt_D 104 NDIALIKLAETVELGDTIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKET 183 (251)
T ss_dssp SCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTT
T ss_pred CCEEEEEECCCcccCCCeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCC
Confidence 699999998653 33345666665432 34678888888542111 011222221111100 0000 00001
Q ss_pred EEEEE----eeccCCCCCCceecC-CC--cEEEEEeee
Q 017471 108 GLQID----AAINSGNSGGPAFND-KG--KCVGIAFQS 138 (371)
Q Consensus 108 ~i~~d----a~i~~G~SGGPlvn~-~G--~VIGI~~~~ 138 (371)
.+=.. ...-.|+|||||+-. +| .++||++..
T Consensus 184 ~~Ca~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g 221 (251)
T 1pyt_D 184 MVCAGGDGVISACNGDSGGPLNCQADGQWDVRGIVSFG 221 (251)
T ss_dssp EEEECCSCSSCCCCSCTTCEEEEESSSSEEEEEEEEEC
T ss_pred eEEecCCCCCccCCCCCCCceEEEECCCEEEEEEEEEC
Confidence 11111 133479999999853 56 699998764
No 303
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=94.34 E-value=0.21 Score=44.48 Aligned_cols=135 Identities=14% Similarity=0.093 Sum_probs=66.4
Q ss_pred EeEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeCCCCC----CceeeeeEE
Q 017471 30 APSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD----TISVTSGVV 91 (371)
Q Consensus 30 ~~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p~g~~----~~s~t~G~V 91 (371)
+..+-+..||. +||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..... ........+
T Consensus 69 ~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~ 148 (241)
T 2jkh_A 69 HEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEV 148 (241)
T ss_dssp ECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEE
T ss_pred EEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeee
Confidence 34455556653 699999998753 32345666665421 2467888888853211 111122222
Q ss_pred eeeeee---eccCCCeEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhH
Q 017471 92 SRIEIL---SYVHGSTELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFI 160 (371)
Q Consensus 92 s~~~~~---~~~~~~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l 160 (371)
.-+... ...........+=. ....-.|+|||||+.. +| .++||++...........+....+....+++
T Consensus 149 ~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI 228 (241)
T 2jkh_A 149 PYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWI 228 (241)
T ss_dssp EEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHH
T ss_pred ccccHHHhcccccCcCCCCeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHH
Confidence 222110 00000000001111 1234579999999853 45 5999987654221112223334455566666
Q ss_pred hhhh
Q 017471 161 QDYE 164 (371)
Q Consensus 161 ~~L~ 164 (371)
++..
T Consensus 229 ~~~~ 232 (241)
T 2jkh_A 229 DRSM 232 (241)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 6543
No 304
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=94.33 E-value=0.16 Score=46.67 Aligned_cols=133 Identities=11% Similarity=-0.022 Sum_probs=64.1
Q ss_pred EeEEEEEecC-------CCCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeCCCCCC-----ceeeeeE
Q 017471 30 APSATLVTAD-------ICIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGDT-----ISVTSGV 90 (371)
Q Consensus 30 ~~A~vv~~d~-------~~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p~g~~~-----~s~t~G~ 90 (371)
+..+-+.+|| .+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+...... ..+..-+
T Consensus 118 ~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~ 197 (283)
T 3f1s_B 118 IKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTL 197 (283)
T ss_dssp EEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEE
T ss_pred EEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeE
Confidence 3444456665 3699999999653 33346666665432 34688888888541111 1112222
Q ss_pred Eeeeeee-eccC--CCeEEeEEEEEeeccCCCCCCceec-CCCc--EEEEEeeecccCCccceeccccCcchhHhHhhhh
Q 017471 91 VSRIEIL-SYVH--GSTELLGLQIDAAINSGNSGGPAFN-DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 164 (371)
Q Consensus 91 Vs~~~~~-~~~~--~~~~~~~i~~da~i~~G~SGGPlvn-~~G~--VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~ 164 (371)
++...-. .+.. ....+ ....+.....|+|||||+- .+|+ ++||++.... ......+...-+....+++++..
T Consensus 198 ~~~~~C~~~~~~~~~~~~~-Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c-~~~~~p~vyt~V~~y~~WI~~~~ 275 (283)
T 3f1s_B 198 VEGEECGQVLNVTVTTRTY-CERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPV-GGQAHMVLVTKVSRYSLWFKQIM 275 (283)
T ss_dssp ECHHHHHHHHTSCCCTTEE-EEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSG-GGCSSEEEEEEGGGGHHHHHHHH
T ss_pred eCHHHHhhhhcCCCCCCeE-cccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCC-CCCCcceEEEEhHHhHHHHHHHh
Confidence 2211100 0100 01111 1111222336899999985 4566 9999854221 11112223344444555555543
No 305
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=94.32 E-value=0.52 Score=41.80 Aligned_cols=99 Identities=13% Similarity=0.104 Sum_probs=50.3
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC----ceeeeeEEeeeeeeecc----CCC-eEE
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT----ISVTSGVVSRIEILSYV----HGS-TEL 106 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~----~s~t~G~Vs~~~~~~~~----~~~-~~~ 106 (371)
.+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+...... .......+.-+...... .+. ...
T Consensus 91 ~~DIALl~L~~~v~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 170 (240)
T 1gvk_B 91 GYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKN 170 (240)
T ss_dssp CCCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCT
T ss_pred CCcEEEEEECCccccCCCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCc
Confidence 5699999998653 22345566665432 34688999998543211 01111111111110000 000 000
Q ss_pred eEEEEE----eeccCCCCCCceec-CCC--cEEEEEeee
Q 017471 107 LGLQID----AAINSGNSGGPAFN-DKG--KCVGIAFQS 138 (371)
Q Consensus 107 ~~i~~d----a~i~~G~SGGPlvn-~~G--~VIGI~~~~ 138 (371)
..+=.. ...-.|+|||||+- .+| .++||.+..
T Consensus 171 ~~~Ca~~~~~~~~C~GDSGgPL~~~~~g~~~l~Gi~S~g 209 (240)
T 1gvk_B 171 SMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFV 209 (240)
T ss_dssp TEEEECCSSSCBCCTTCTTCEEEEEETTEEEEEEEEEEC
T ss_pred ceEeecCCCCCcccCCCCcCceEEEECCcEEEEEEEEEe
Confidence 111111 12347999999985 357 899998764
No 306
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=94.26 E-value=0.23 Score=43.96 Aligned_cols=42 Identities=14% Similarity=0.092 Sum_probs=34.5
Q ss_pred eEEEEEeeccCCCCCCceecC----CCcEEEEEeeecccCCccceeccccC
Q 017471 107 LGLQIDAAINSGNSGGPAFND----KGKCVGIAFQSLKHEDVENIGYVIPT 153 (371)
Q Consensus 107 ~~i~~da~i~~G~SGGPlvn~----~G~VIGI~~~~~~~~~~~~~~~aiP~ 153 (371)
..+..+++-.+|.-|||++.. .|+++||..+.- .+.+||.|+
T Consensus 159 ~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~-----g~~G~a~~l 204 (212)
T 2hal_A 159 QAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG-----NSILVAKLV 204 (212)
T ss_dssp EEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE-----TTEEEEEEC
T ss_pred eEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC-----CCcEEEEee
Confidence 568999999999999999875 899999999853 345677665
No 307
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=94.05 E-value=0.31 Score=43.24 Aligned_cols=98 Identities=10% Similarity=0.093 Sum_probs=50.3
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC----CceeeeeEEeeeeeeecc----CCC-eEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYV----HGS-TELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~~~~----~~~-~~~~ 107 (371)
+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... .+. ....
T Consensus 92 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~ 171 (240)
T 1fon_A 92 NDIALVKLSRSAQLGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKT 171 (240)
T ss_dssp CCCEEEECSSCCCCTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTT
T ss_pred CCEEEEEecCccccCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccc
Confidence 799999999653 32345666665432 3467888888854321 111122222111110000 000 0000
Q ss_pred EEEEE---eeccCCCCCCceecC--CC--cEEEEEeee
Q 017471 108 GLQID---AAINSGNSGGPAFND--KG--KCVGIAFQS 138 (371)
Q Consensus 108 ~i~~d---a~i~~G~SGGPlvn~--~G--~VIGI~~~~ 138 (371)
.+=.. ...-.|+|||||+-. +| .++||++..
T Consensus 172 ~~Ca~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g 209 (240)
T 1fon_A 172 MVCAGGDTRSGCNGDSGGPLNCPAADGSWQVHGVTSFV 209 (240)
T ss_dssp EEEECCSSSCSTTSCTTCEEEEECSSSCEEEEEEEEEC
T ss_pred eEeecCCCCcccCCCCCCeEEeEcCCCCEEEEEEEEEc
Confidence 11111 233479999999853 56 899998764
No 308
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=93.95 E-value=0.33 Score=44.42 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=62.3
Q ss_pred CCCEEEEEEecC-----CCcCCccceecCCCC---CCCCeEEEEEeCCCCC-----CceeeeeEEeeeeeeecc----CC
Q 017471 40 ICIYTMLTVEDD-----EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYV----HG 102 (371)
Q Consensus 40 ~~DlAlLkv~~~-----~~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~~~~----~~ 102 (371)
.+||||||++.+ .|.+.+.|+.+.... ..++.+.+.|+..... ........+.-+...... .+
T Consensus 123 ~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~ 202 (283)
T 1yc0_A 123 DHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYG 202 (283)
T ss_dssp TTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTG
T ss_pred CCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccC
Confidence 369999999875 333456677665422 3578899999864321 112222222222211000 00
Q ss_pred C-eEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 103 S-TELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 103 ~-~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
. .....+=. ....-.|+|||||+-. +| .++||++....-......+....+....+++++.
T Consensus 203 ~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~ 272 (283)
T 1yc0_A 203 ADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDR 272 (283)
T ss_dssp GGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHH
T ss_pred CcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHH
Confidence 0 00011111 1234579999999854 46 5999987654221111223334444555666554
No 309
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=93.85 E-value=0.6 Score=41.32 Aligned_cols=121 Identities=12% Similarity=0.077 Sum_probs=59.5
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCCC--ceeeeeEEeeeeee---e-ccC----CCeEE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT--ISVTSGVVSRIEIL---S-YVH----GSTEL 106 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~~--~s~t~G~Vs~~~~~---~-~~~----~~~~~ 106 (371)
+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+...... .......+.-+... . +.. .....
T Consensus 93 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 172 (242)
T 2qy0_B 93 GDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQ 172 (242)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCT
T ss_pred CcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCC
Confidence 499999999653 33346666665433 35688888888543211 11222222211110 0 000 00000
Q ss_pred eEEEE-----EeeccCCCCCCceecCCC-----cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 107 LGLQI-----DAAINSGNSGGPAFNDKG-----KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 107 ~~i~~-----da~i~~G~SGGPlvn~~G-----~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
..+=. ....-.|+|||||+-.++ .++||++....-.. +.+...-+....+++++.
T Consensus 173 ~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~WI~~~ 237 (242)
T 2qy0_B 173 NMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKE 237 (242)
T ss_dssp TEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS--SCEEEEEGGGGHHHHHHH
T ss_pred CEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC--CCcEEEEHHHHHHHHHHH
Confidence 11111 123457999999986432 49999876542211 223334444455555553
No 310
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=93.80 E-value=0.56 Score=41.70 Aligned_cols=48 Identities=13% Similarity=0.070 Sum_probs=31.1
Q ss_pred EEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 32 SATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 32 A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
.+-+..||. +||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..
T Consensus 74 v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 132 (245)
T 2f9n_A 74 VSRIIVHPQFYIIQTGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGD 132 (245)
T ss_dssp EEEEEECTTCCSSCCTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCC
T ss_pred EEEEEECCCccCCCCCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCC
Confidence 344455654 599999999753 33346666665432 3568899999854
No 311
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=93.75 E-value=0.4 Score=43.96 Aligned_cols=24 Identities=21% Similarity=0.513 Sum_probs=20.6
Q ss_pred ccCCCCCCceecCCCcEEEEEeee
Q 017471 115 INSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 115 i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
.-.|+|||||++.+++++||++..
T Consensus 189 tC~gdsGgPl~~~~~~~~Gi~s~g 212 (268)
T 1arb_A 189 TEPGSSGSPIYSPEKRVLGQLHGG 212 (268)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEC
T ss_pred CccCcccCCcEeeCCEEEEEEeec
Confidence 457999999998789999998754
No 312
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=93.62 E-value=1.2 Score=40.74 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=59.6
Q ss_pred CCEEEEEEecCC-CcCCccceecCCC----CCCCCeEEEEEeCCCCC-----CceeeeeEEeeeeeeec-----cCCCeE
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGEL----PALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSY-----VHGSTE 105 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s----~~lgd~V~~iG~p~g~~-----~~s~t~G~Vs~~~~~~~-----~~~~~~ 105 (371)
+||||||++.+. |-+.+.|+.+... +..++.+.+.|+..... ........+.-+..... ......
T Consensus 100 nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~ 179 (290)
T 1fiw_A 100 NDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIR 179 (290)
T ss_dssp TCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCC
T ss_pred CCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCC
Confidence 699999999753 3334566666532 23478889998854211 11122222222221100 000000
Q ss_pred EeEEEEE-----eeccCCCCCCceecCC---C--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 106 LLGLQID-----AAINSGNSGGPAFNDK---G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 106 ~~~i~~d-----a~i~~G~SGGPlvn~~---G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
...+=.. ...-.|+|||||+-.+ | .++||++....-......+...-+....+++++.
T Consensus 180 ~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~ 247 (290)
T 1fiw_A 180 STNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASK 247 (290)
T ss_dssp TTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHH
T ss_pred CCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 0111111 1334699999998543 3 5999987653221111122223344455555554
No 313
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=93.58 E-value=0.71 Score=44.14 Aligned_cols=39 Identities=15% Similarity=0.086 Sum_probs=26.4
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..
T Consensus 211 nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~ 253 (372)
T 1z8g_A 211 NDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGN 253 (372)
T ss_dssp TCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSB
T ss_pred ccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCC
Confidence 499999998653 33346676665432 3468899998854
No 314
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=93.33 E-value=0.65 Score=42.14 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=27.5
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
.+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..
T Consensus 131 ~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 174 (278)
T 2olg_A 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGR 174 (278)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCc
Confidence 3699999998653 33346676665432 3578899999854
No 315
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=92.92 E-value=0.35 Score=44.37 Aligned_cols=39 Identities=13% Similarity=0.114 Sum_probs=26.0
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p~ 79 (371)
+||||||++.+. |-+.+.|+.|.... ..+..+.+.|+-.
T Consensus 128 ~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~ 173 (289)
T 2bdy_A 128 RDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGN 173 (289)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSC
T ss_pred CeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCc
Confidence 699999999753 32345666665421 3467888888753
No 316
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=92.55 E-value=0.46 Score=41.94 Aligned_cols=123 Identities=13% Similarity=0.065 Sum_probs=57.8
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC-----CCCCeEEEEEeCCCCC----CceeeeeEEeeeeee---eccCCCeEEe
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD----TISVTSGVVSRIEIL---SYVHGSTELL 107 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~-----~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~---~~~~~~~~~~ 107 (371)
+||||||++.+. +.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... ..........
T Consensus 88 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 167 (235)
T 2wph_S 88 HDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNN 167 (235)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTT
T ss_pred CCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCC
Confidence 599999998653 22345666665422 1357788888753211 111122222211110 0000000000
Q ss_pred EEEE-----EeeccCCCCCCceec-CCC--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 108 GLQI-----DAAINSGNSGGPAFN-DKG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 108 ~i~~-----da~i~~G~SGGPlvn-~~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
.+=. ....-.|+|||||+. .+| .++||.+....-......+....+....+++++.
T Consensus 168 ~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 231 (235)
T 2wph_S 168 MFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 (235)
T ss_dssp EEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred EEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 1111 123457999999985 345 5999987643221111223334444455555543
No 317
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=92.30 E-value=0.5 Score=42.24 Aligned_cols=125 Identities=17% Similarity=0.171 Sum_probs=61.3
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeCCCCC----CceeeeeEEeeeeee----eccC----
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYPIGGD----TISVTSGVVSRIEIL----SYVH---- 101 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p~g~~----~~s~t~G~Vs~~~~~----~~~~---- 101 (371)
+||||||++.+. |.+.+.|+.+.... ..++.+.+.|+..... ........+.-+... .+..
T Consensus 89 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~ 168 (254)
T 2bz6_H 89 HDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDS 168 (254)
T ss_dssp SCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTC
T ss_pred CcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccC
Confidence 699999998753 33345666665421 2467888888753211 111222222221110 0000
Q ss_pred CCeEEeEEEE-----EeeccCCCCCCceecC-CC--cEEEEEeeecccCCccceeccccCcchhHhHhhhhh
Q 017471 102 GSTELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 102 ~~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L~~ 165 (371)
.......+=. ....-.|+|||||+.. +| .++||++...........+....+....+++++..+
T Consensus 169 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 240 (254)
T 2bz6_H 169 PNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR 240 (254)
T ss_dssp CCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHT
T ss_pred CccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 0000001111 1233468999999853 46 599998765422111222333445556666666543
No 318
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=92.20 E-value=0.96 Score=47.87 Aligned_cols=129 Identities=15% Similarity=0.159 Sum_probs=61.2
Q ss_pred EEecC-CCCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCCCCC---C---ceeeeeEEeeeeeeec--cC
Q 017471 35 LVTAD-ICIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---T---ISVTSGVVSRIEILSY--VH 101 (371)
Q Consensus 35 v~~d~-~~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~g~~---~---~s~t~G~Vs~~~~~~~--~~ 101 (371)
+..++ ..||||||++.+. |.+.+.|+.|.... ..+..+.+.|+..... . ..+..-+++...-... ..
T Consensus 638 i~~hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~ 717 (791)
T 4dur_A 638 LFLEPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLN 717 (791)
T ss_dssp EEECTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTT
T ss_pred EECCCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccC
Confidence 34454 4799999998653 33355666665432 3468888888854211 1 1222222322111010 11
Q ss_pred CCeEEeEEEE-----EeeccCCCCCCceecCC-C--cEEEEEeeecccCCccceeccccCcchhHhHhhh
Q 017471 102 GSTELLGLQI-----DAAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 163 (371)
Q Consensus 102 ~~~~~~~i~~-----da~i~~G~SGGPlvn~~-G--~VIGI~~~~~~~~~~~~~~~aiP~~~i~~~l~~L 163 (371)
.......+=. ....-.|+|||||+-.+ | .++||++....-......+...-+.....++++.
T Consensus 718 ~~i~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~ 787 (791)
T 4dur_A 718 GRVQSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGV 787 (791)
T ss_dssp TCCCTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHH
T ss_pred CCCCCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 1100011111 11234699999998533 3 4999986543211111123333444455555543
No 319
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=91.76 E-value=0.25 Score=41.48 Aligned_cols=28 Identities=25% Similarity=0.622 Sum_probs=22.2
Q ss_pred EeEEEEEeeccCCCCCCceecCCCcEEEEE
Q 017471 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGIA 135 (371)
Q Consensus 106 ~~~i~~da~i~~G~SGGPlvn~~G~VIGI~ 135 (371)
...|.+| ..+|.||+|++|.+|+|||+.
T Consensus 108 igaI~lD--~p~GtSGSPIin~~G~vVGLY 135 (172)
T 2fp7_B 108 IGAVTLD--YPTGTSGSPIVDKNGDVIGLY 135 (172)
T ss_dssp EEEECCC--CCGGGTTCEEECTTSCEEEES
T ss_pred EEEEECC--CCCCCCCCceEccCCcEEEEe
Confidence 3344444 467999999999999999984
No 320
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=91.70 E-value=0.28 Score=41.78 Aligned_cols=28 Identities=36% Similarity=0.717 Sum_probs=22.3
Q ss_pred EeEEEEEeeccCCCCCCceecCCCcEEEEE
Q 017471 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGIA 135 (371)
Q Consensus 106 ~~~i~~da~i~~G~SGGPlvn~~G~VIGI~ 135 (371)
...|.+| ..+|.||+|++|.+|+|||+.
T Consensus 123 igaI~lD--~p~GTSGSPIin~~G~vvGLY 150 (185)
T 2fom_B 123 IGAVSLD--FSPGTSGSPIVDKKGKVVGLY 150 (185)
T ss_dssp EEEECCC--SCGGGTTCEEECTTSCEEEET
T ss_pred EEEEECC--CCCCCCCCceEccCCcEEEEe
Confidence 4345554 467999999999999999983
No 321
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=91.63 E-value=0.26 Score=41.81 Aligned_cols=29 Identities=24% Similarity=0.560 Sum_probs=22.7
Q ss_pred EeEEEEEeeccCCCCCCceecCCCcEEEEEe
Q 017471 106 LLGLQIDAAINSGNSGGPAFNDKGKCVGIAF 136 (371)
Q Consensus 106 ~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~ 136 (371)
...|.+| ..+|.||+|++|.+|+|||+.-
T Consensus 122 igAI~lD--~p~GTSGSPIin~~G~vvGLYG 150 (185)
T 2ggv_B 122 IGAVTLD--FPTGTSGSPIVDKNGDVIGLYG 150 (185)
T ss_dssp EEEECCC--CCGGGTTCEEECTTSCEEEEEE
T ss_pred EEEEECC--CCCCCCCCceEcCCCcEEEEec
Confidence 3344444 4679999999999999999953
No 322
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=91.60 E-value=0.41 Score=40.79 Aligned_cols=57 Identities=26% Similarity=0.471 Sum_probs=35.9
Q ss_pred CCeEEEEEeCCCCCCc--eeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEE
Q 017471 69 QDAVTVVGYPIGGDTI--SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIA 135 (371)
Q Consensus 69 gd~V~~iG~p~g~~~~--s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~ 135 (371)
.++|.++-.+-+.... ..+.|+..- ...+...+.+|- .+|.||+|++|.+|+|||+.
T Consensus 101 ~~eVQl~Av~Pgk~~~~~Qt~PG~f~~--------~~g~iGaV~lD~--p~GTSGSPIin~~G~VVGLY 159 (191)
T 3u1j_B 101 GEEVQVIAVEPGKNPKNFQTMPGTFQT--------TTGEIGAIALDF--KPGTSGSPIINREGKVVGLY 159 (191)
T ss_dssp TCCEEEEECCTTSCCEEEEECCEEEEC--------SSCEEEEECCCC--CTTCTTCEEECTTSCEEEEC
T ss_pred CceEEEEEECCCCceEEEEeCCeEEEc--------CCCeEEEEECCC--CCCCCCCceecCCCcEEEEe
Confidence 3778888877654431 122332221 112344555555 57999999999999999984
No 323
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=91.48 E-value=1.3 Score=45.64 Aligned_cols=94 Identities=20% Similarity=0.285 Sum_probs=55.6
Q ss_pred CCEEEEEEecCCCcCCccceecCCCCCCC-CeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCC
Q 017471 41 CIYTMLTVEDDEFWEGVLPVEFGELPALQ-DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGN 119 (371)
Q Consensus 41 ~DlAlLkv~~~~~~~~l~~~~l~~s~~lg-d~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~ 119 (371)
.|+++++++..+-+.++.. -+.+..... +-++++ +..+.....+..|.+...+... ..+......+..+++..+|.
T Consensus 70 ~dl~~~~~~~~~~frdi~~-~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~g~~~-~~g~~~~~~~~y~~~T~~G~ 146 (644)
T 2ijd_1 70 LEITIITLKRNEKFRDIRP-HIPTQITETNDGVLIV-NTSKYPNMYVPVGAVTEQGYLN-LGGRQTARTLMYNFPTRAGQ 146 (644)
T ss_dssp EEEEEEEECSSCCBCCCGG-GSCSSCCCEEEEEEEE-CSSSSTTEEEEEEEEEEEEEEC-CTTSCEEEEEEECSCCCTTC
T ss_pred eeEEEEECCCCCCcCChHH-hccCCccCCCceEEEE-cCCCCceEEEEeeeeeecccee-cCCCccccEEEEcCCCCCCC
Confidence 6999999975431223322 122222222 444443 2223222234567776544321 22333445788999999999
Q ss_pred CCCceecCCCcEEEEEeee
Q 017471 120 SGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~~ 138 (371)
-|+|++. +|+||||.++.
T Consensus 147 CG~~l~~-~gkIvGiHvaG 164 (644)
T 2ijd_1 147 AGGVITC-TGKVIGMHVGG 164 (644)
T ss_dssp TTCEEEE-TTEEEEEEEEE
T ss_pred CCchhhh-CCcEEEEEEcC
Confidence 9999887 69999999886
No 324
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=91.39 E-value=0.41 Score=40.96 Aligned_cols=56 Identities=23% Similarity=0.435 Sum_probs=35.7
Q ss_pred CeEEEEEeCCCCCCc--eeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEE
Q 017471 70 DAVTVVGYPIGGDTI--SVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIA 135 (371)
Q Consensus 70 d~V~~iG~p~g~~~~--s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~ 135 (371)
++|.++-.+-+.... ..+.|+..- ...+...+.+|- .+|.||+|++|.+|+|||+.
T Consensus 97 ~eVQl~Av~Pgk~~~~~Qt~PG~f~~--------~~g~iGaV~lD~--p~GTSGSPIin~~G~VVGLY 154 (198)
T 3e90_B 97 DEVQMIVVEPGKNVKNVRTKPGVFKT--------PEGEIGAVTLDF--PTGTSGSPIVDKNGDVIGLY 154 (198)
T ss_dssp SCEEEEECCTTSCCEEEEECCEEEEE--------TTEEEEEECCCC--CTTCTTCEEECTTCCEEEEC
T ss_pred ceEEEEEECCCCceEEEEeCCeEEEc--------CCCeEEEEECCC--CCCCCCCceecCCCcEEEEe
Confidence 788888887654431 122333221 112344455555 57999999999999999984
No 325
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=90.67 E-value=0.51 Score=41.54 Aligned_cols=57 Identities=25% Similarity=0.473 Sum_probs=35.5
Q ss_pred CCeEEEEEeCCCCCC--ceeeeeEEeeeeeeeccCCCeEEeEEEEEeeccCCCCCCceecCCCcEEEEE
Q 017471 69 QDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIA 135 (371)
Q Consensus 69 gd~V~~iG~p~g~~~--~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~ 135 (371)
.++|.++-.+-+... ...+.|+..- ...+...+.+|- .+|.||+|++|.+|+|||+.
T Consensus 142 ~~eVqv~A~~Pg~~~~~~qt~PG~~~~--------~~g~igav~lD~--p~GTSGSPIin~~G~VvGLY 200 (236)
T 3lkw_A 142 GEEVQVIAVEPGKNPKNVQTAPGTFKT--------PEGEVGAIALDF--KPGTAGSPIVNREGKIVGLY 200 (236)
T ss_dssp TCCEEEEECCTTSCCEEEEECCEEEEE--------TTEEEEEECCCC--CTTCTTCEEECTTSCEEEES
T ss_pred CceEEEEEECCCCceEEEEeCCeEEEc--------CCCeEEEEECCC--CCCCCCCceecCCCcEEEEe
Confidence 377888877655433 1122333221 112344455555 57999999999999999983
No 326
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=90.56 E-value=2.4 Score=40.10 Aligned_cols=50 Identities=10% Similarity=0.056 Sum_probs=32.2
Q ss_pred EeEEEEEecCC---CCEEEEEEecCC-CcCCccceecCCC--CCCCCeEEEEEeCC
Q 017471 30 APSATLVTADI---CIYTMLTVEDDE-FWEGVLPVEFGEL--PALQDAVTVVGYPI 79 (371)
Q Consensus 30 ~~A~vv~~d~~---~DlAlLkv~~~~-~~~~l~~~~l~~s--~~lgd~V~~iG~p~ 79 (371)
+..+-+.+||. +||||||++.+- |-+.+.|+.+... ...+...++.|+-.
T Consensus 172 ~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~ 227 (347)
T 4f4o_C 172 VEIEKVIFHPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGR 227 (347)
T ss_dssp ECEEEEEECSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSB
T ss_pred EEEEEEEECcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEecccc
Confidence 34445566764 799999998653 3345666666433 24567788887753
No 327
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=90.37 E-value=1.7 Score=41.79 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=27.3
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-----CCCCeEEEEEeCC
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPI 79 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-----~lgd~V~~iG~p~ 79 (371)
.+||||||++.+. |-+.+.|+.|.... ..++.+.+.|+..
T Consensus 247 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~ 292 (403)
T 1zjk_A 247 DNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGL 292 (403)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCT
T ss_pred cccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCc
Confidence 3699999999753 33356677665432 3468888988854
No 328
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=88.41 E-value=0.29 Score=38.20 Aligned_cols=47 Identities=9% Similarity=0.068 Sum_probs=39.0
Q ss_pred eccEEEech-HHHHHHcCcc-----cccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 296 IAGFVFSRC-LYLISVLSME-----RIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~~~~-----~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
|+|+.++++ +..+.++++. +...|++|..+.++|||+..-...+|+|
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I 59 (113)
T 2pzd_A 7 YIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVI 59 (113)
T ss_dssp ECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEE
T ss_pred EeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEE
Confidence 789999988 7777777763 2357899999999999999888888876
No 329
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=88.36 E-value=3 Score=38.99 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=26.5
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
+||||||++.+. |.+.+.|+.|.+.. ..+..+.+.|+..
T Consensus 182 nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~ 224 (329)
T 1md8_A 182 GDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGV 224 (329)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCB
T ss_pred ccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCC
Confidence 499999999653 33346677665433 3567888888753
No 330
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=88.00 E-value=3.2 Score=39.94 Aligned_cols=39 Identities=5% Similarity=-0.043 Sum_probs=25.9
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC--CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP--ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~--~lgd~V~~iG~p~ 79 (371)
+||||||++.+. +-+.+.|+.|.... ..++.+.+.|+..
T Consensus 230 nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~ 271 (394)
T 2b9l_A 230 NDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGK 271 (394)
T ss_dssp TCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCT
T ss_pred cceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccC
Confidence 699999999653 22346677665432 2357788888853
No 331
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=87.95 E-value=0.48 Score=46.25 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=25.1
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC------CCCCeEEEEEeC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP------ALQDAVTVVGYP 78 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~------~lgd~V~~iG~p 78 (371)
+||||||++.+. |-+.+.|+.|.... ..+..+.+.|+-
T Consensus 263 nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG 307 (424)
T 3nxp_A 263 RDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 307 (424)
T ss_dssp TCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESS
T ss_pred CCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecC
Confidence 599999998653 33345666664422 246788888875
No 332
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=87.57 E-value=0.49 Score=37.56 Aligned_cols=26 Identities=38% Similarity=0.700 Sum_probs=22.7
Q ss_pred eccCCCCCCceecCCCcEEEEEeeec
Q 017471 114 AINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 114 ~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
.-.+|+||-|++|..|+|++|+....
T Consensus 95 ~g~~GdSGrpI~Dn~GrVVaIVlGG~ 120 (149)
T 1vcp_A 95 AGKPGDSGRPIFDNKGRVVAIVLGGA 120 (149)
T ss_dssp SCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCCccCcCCCcEEEEEecCC
Confidence 34689999999999999999987765
No 333
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=87.45 E-value=0.5 Score=38.01 Aligned_cols=27 Identities=33% Similarity=0.582 Sum_probs=23.3
Q ss_pred eeccCCCCCCceecCCCcEEEEEeeec
Q 017471 113 AAINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 113 a~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
..-.+|+||-|++|..|+||+|+....
T Consensus 102 g~g~~GdSGrPi~Dn~GrVVaIVlGG~ 128 (158)
T 4agk_A 102 GAGGPGDSGRPILDNSGKVVAIVLGGA 128 (158)
T ss_dssp TSSCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred ccCCCCCCCCccccCCCCEEEEEecCC
Confidence 345689999999999999999987765
No 334
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=87.35 E-value=5.2 Score=40.43 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=22.1
Q ss_pred CCEEEEEEecCCCc-----CCccceecCCCC---CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDEFW-----EGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~~~-----~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
+||||||++.+... ....|+.+.... ..++.+.+.|+..
T Consensus 410 nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~ 456 (565)
T 2xrc_A 410 NDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGR 456 (565)
T ss_dssp TCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC---
T ss_pred ccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCcc
Confidence 69999999875311 123455443322 3468888888753
No 335
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=87.27 E-value=0.34 Score=37.82 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=38.6
Q ss_pred eccEEEech-HHHHHHcCcc-----cccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 296 IAGFVFSRC-LYLISVLSME-----RIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~~~~-----~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
|+|+.++++ +..+..++++ +...|++|..+.++|||+..-...+|+|
T Consensus 7 ~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I 59 (112)
T 2p3w_A 7 FIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDII 59 (112)
T ss_dssp ECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEE
T ss_pred eeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEE
Confidence 789999988 7777777653 2367999999999999998888888875
No 336
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=87.16 E-value=0.53 Score=37.98 Aligned_cols=25 Identities=24% Similarity=0.555 Sum_probs=22.2
Q ss_pred ccCCCCCCceecCCCcEEEEEeeec
Q 017471 115 INSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 115 i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
-.+|+||-|++|..|+||+|+....
T Consensus 105 G~~GDSGRpI~DN~GrVVaivlgg~ 129 (161)
T 1svp_A 105 GGRGDAGRPIMDNSGRVVAIVLGGA 129 (161)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCccCcCCCcEEEEEecCC
Confidence 3589999999999999999987765
No 337
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=87.05 E-value=1.8 Score=41.38 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=26.1
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p~ 79 (371)
+||||||++.+. |.+.+.|+.|.... ..+..+.+.|+..
T Consensus 250 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 292 (399)
T 1gpz_A 250 GDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGV 292 (399)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-
T ss_pred CcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCC
Confidence 499999999653 33356677665433 3567888888753
No 338
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=87.01 E-value=0.5 Score=41.43 Aligned_cols=26 Identities=35% Similarity=0.650 Sum_probs=22.7
Q ss_pred eccCCCCCCceecCCCcEEEEEeeec
Q 017471 114 AINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 114 ~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
.--+|+||-|++|..|+||+|+....
T Consensus 199 ~G~~GDSGRpI~DN~GrVVaIVLGGa 224 (253)
T 2yew_A 199 SGKPGDSGRPIFDNTGKVVAIVLGGA 224 (253)
T ss_dssp SCCSSCTTCEEECSSCBEEEEEEEEE
T ss_pred CCCCCCCCCccccCCCcEEEEEecCC
Confidence 33589999999999999999998765
No 339
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=86.91 E-value=0.49 Score=37.98 Aligned_cols=26 Identities=27% Similarity=0.606 Sum_probs=22.8
Q ss_pred eccCCCCCCceecCCCcEEEEEeeec
Q 017471 114 AINSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 114 ~i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
.-.||+||-|++|..|+||+|+....
T Consensus 102 ~g~~GdSGrpI~Dn~GrVVaIVlGGa 127 (157)
T 1ep5_B 102 VGAKGDSGRPILDNQGRVVAIVLGGV 127 (157)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCCccCcCCCcEEEEEecCC
Confidence 44689999999999999999987655
No 340
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=85.92 E-value=2.5 Score=43.36 Aligned_cols=48 Identities=13% Similarity=0.182 Sum_probs=30.0
Q ss_pred eEEEEEecCC-------CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeC
Q 017471 31 PSATLVTADI-------CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYP 78 (371)
Q Consensus 31 ~A~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p 78 (371)
..+-+.+||. +||||||++.+. +.+.+.|+.|.... ..++.+.+.|+.
T Consensus 462 ~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG 520 (625)
T 2f83_A 462 GVQEIIIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWG 520 (625)
T ss_dssp EEEEEEECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC
T ss_pred eEEEEEECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEec
Confidence 3444556653 699999998653 33345666665422 346778888875
No 341
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=85.81 E-value=4.7 Score=37.47 Aligned_cols=40 Identities=13% Similarity=0.050 Sum_probs=26.8
Q ss_pred CCCEEEEEEecCC-CcCCccceecCCCC-----CCCCeEEEEEeCC
Q 017471 40 ICIYTMLTVEDDE-FWEGVLPVEFGELP-----ALQDAVTVVGYPI 79 (371)
Q Consensus 40 ~~DlAlLkv~~~~-~~~~l~~~~l~~s~-----~lgd~V~~iG~p~ 79 (371)
.+||||||++.+. |-+.+.|+.|.... ..++.+.+.|+..
T Consensus 172 ~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~ 217 (333)
T 1elv_A 172 DNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGR 217 (333)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCC
T ss_pred cceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcC
Confidence 3699999999753 33346666665432 2368888988854
No 342
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=85.26 E-value=6.4 Score=38.00 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=26.5
Q ss_pred CCEEEEEEecCC-CcCCccceecCCC------CCCCCeEEEEEeCC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGEL------PALQDAVTVVGYPI 79 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s------~~lgd~V~~iG~p~ 79 (371)
+||||||++.+. |.+.+.|+.+... ...++.+++.|+..
T Consensus 222 nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~ 267 (408)
T 2xxl_A 222 HDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGT 267 (408)
T ss_dssp SCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCC
T ss_pred cceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCc
Confidence 699999998653 3334667766543 23467888888854
No 343
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=85.09 E-value=0.62 Score=41.18 Aligned_cols=25 Identities=28% Similarity=0.570 Sum_probs=22.3
Q ss_pred ccCCCCCCceecCCCcEEEEEeeec
Q 017471 115 INSGNSGGPAFNDKGKCVGIAFQSL 139 (371)
Q Consensus 115 i~~G~SGGPlvn~~G~VIGI~~~~~ 139 (371)
--+|+||-|++|..|+||+|+....
T Consensus 210 G~~GDSGRpI~DN~GrVVaIVLGGa 234 (264)
T 1kxf_A 210 GGRGDSGRPIMDNSGRVVAIVLGGA 234 (264)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred CCCCCCCCccccCCCcEEEEEecCC
Confidence 3589999999999999999998765
No 344
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=82.80 E-value=0.75 Score=39.12 Aligned_cols=41 Identities=27% Similarity=0.441 Sum_probs=27.2
Q ss_pred cCCCCCCceecCCCcEEEEEeeecccCCccceeccccCcch
Q 017471 116 NSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVI 156 (371)
Q Consensus 116 ~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aiP~~~i 156 (371)
-.|.||||++-.+|.+|||-.+.....+...--.++|.+..
T Consensus 156 lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l 196 (203)
T 3su6_A 156 LKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESL 196 (203)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHH
T ss_pred ccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEcccc
Confidence 37999999999999999997655433232222233566543
No 345
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=79.32 E-value=0.75 Score=37.26 Aligned_cols=47 Identities=9% Similarity=-0.015 Sum_probs=38.0
Q ss_pred eccEEEech-H---HHHHHcCccc-ccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 296 IAGFVFSRC-L---YLISVLSMER-IMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~~l-~---~~~~~~~~~~-~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
|+|+.++++ + .....+|++. ...+++|..+.++|||+ .-.+.+|+|-
T Consensus 30 ~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~GD~I~ 81 (134)
T 2l97_A 30 ALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDVIT 81 (134)
T ss_dssp CCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCSSCEEE
T ss_pred EeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCCCCEEE
Confidence 799988776 3 5667788874 36889999999999999 8888888763
No 346
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=77.71 E-value=1.8 Score=32.69 Aligned_cols=24 Identities=42% Similarity=0.577 Sum_probs=17.8
Q ss_pred cCCCCCCceecCC-C--cEEEEEeeec
Q 017471 116 NSGNSGGPAFNDK-G--KCVGIAFQSL 139 (371)
Q Consensus 116 ~~G~SGGPlvn~~-G--~VIGI~~~~~ 139 (371)
-.|+|||||+-.. | .++||++...
T Consensus 43 C~GDSGGPL~~~~~~~~~l~GIvS~g~ 69 (97)
T 1yph_E 43 CMGDSGGPLVCKKNGAWTLVGIVSWGS 69 (97)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CcCCCCCcEEEEeCCeEEEEEEEEeCC
Confidence 4699999998533 3 7999987543
No 347
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=73.32 E-value=2.8 Score=39.64 Aligned_cols=46 Identities=7% Similarity=0.060 Sum_probs=40.8
Q ss_pred eccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 296 IAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
|+|+.++++ +.+.+.++++. ..|++|..+.++|||+---...+|+|
T Consensus 241 ~lGv~~~~~~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI 287 (345)
T 3stj_A 241 LLGIKGTEMSADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDII 287 (345)
T ss_dssp ECCEEEEECCHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEE
T ss_pred ccceeeEeecHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEE
Confidence 899999988 88888998864 58999999999999999888888876
No 348
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=71.75 E-value=13 Score=30.34 Aligned_cols=97 Identities=13% Similarity=0.059 Sum_probs=54.5
Q ss_pred EEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEe
Q 017471 34 TLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDA 113 (371)
Q Consensus 34 vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da 113 (371)
-+..+...||+|.+.+...- +.+|-.. -.+-|+---+-...-..++..-..-.++..++.+.+.....+.-..
T Consensus 27 ~V~~~y~rDL~V~~t~a~G~-DtIarC~------Ct~gvYyc~~~~k~yPv~~~~p~~~~iq~seYYP~ryQ~~~l~g~G 99 (142)
T 2hrv_A 27 SILVSYSSDLIIYRTNTVGD-DYIPSCD------CTQATYYCKHKNRYFPITVTSHDWYEIQESEYYPKHIQYNLLIGEG 99 (142)
T ss_dssp CSEEEGGGTEEEEEEEEEEE-CCCCCCC------CCEEEEEEGGGTEEEEEECEEEEEEEECCCSSCCSEEEEEEEEEEC
T ss_pred eEeEeecccEEEEeccCCCC-Ccccccc------ccCcEEEEeecCcCcceEEcCCCeEEecccCCCchhhcccEEEEEc
Confidence 44556677888888875420 1122111 1122222111000001233333344455555666666666777788
Q ss_pred eccCCCCCCceecCCCcEEEEEeee
Q 017471 114 AINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 114 ~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
+..||.-||.|.-.. -||||.++.
T Consensus 100 ~~epGDCGG~L~C~H-GviGivTaG 123 (142)
T 2hrv_A 100 PCEPGDCGGKLLCKH-GVIGIVTAG 123 (142)
T ss_dssp CCCTTCTTCEEEETT-EEEEEEEEE
T ss_pred CCCCCCCCceeeeCC-CceEEEecC
Confidence 999999999999865 699999874
No 349
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=68.17 E-value=6.8 Score=31.27 Aligned_cols=79 Identities=9% Similarity=-0.071 Sum_probs=50.3
Q ss_pred CCCEEEEEEEECCEEEEEEEEeccccccCCCCCCCCCCCceeeccEEEechHHHHHHcCcccccCceEEEEEecCChHhH
Q 017471 254 TGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQC 333 (371)
Q Consensus 254 ~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~ 333 (371)
+.+++.+...++++.....+.+............... .+||.+..- ........+++|..+.++|||+.
T Consensus 12 ~~~p~~~~~~~~~~~~i~~v~l~~~~~~~~i~k~~~~-----~lG~~i~gg------~~~~~~~~gv~V~~V~~gspA~~ 80 (131)
T 1wfg_A 12 DKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGA-----MLGLKVVGG------KMTESGRLCAFITKVKKGSLADT 80 (131)
T ss_dssp CCCSCEEEECSSSSEEEEEEEEECSCTTSCCCSCSCT-----TTTEEEEEE------EECSSSCEEEEEEEECTTSHHHH
T ss_pred CCCCCcccCCCCCCceeeEEEEeccceeEEEecCCCC-----CCCEEEecC------ccCCCCCCCEEEEEECCCChHHH
Confidence 4566788888888888778877765333222111122 267776321 00112235899999999999998
Q ss_pred Hh-hhhhhhHH
Q 017471 334 HN-CQMSSLLW 343 (371)
Q Consensus 334 ~~-~~~~~~~~ 343 (371)
.- .+.+|.|-
T Consensus 81 aG~L~~GD~Il 91 (131)
T 1wfg_A 81 VGHLRPGDEVL 91 (131)
T ss_dssp TSCCCTTCEEE
T ss_pred cCCCCCCCEEE
Confidence 87 88888763
No 350
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=66.10 E-value=1 Score=32.30 Aligned_cols=26 Identities=8% Similarity=-0.027 Sum_probs=21.6
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
.++++..+.++|||+..- ...+|.|.
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~ 47 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVL 47 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEE
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEE
Confidence 678999999999998877 77777764
No 351
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=64.88 E-value=5.2 Score=37.25 Aligned_cols=48 Identities=8% Similarity=0.055 Sum_probs=39.9
Q ss_pred eeccEEEech-HHHHHHcCccc-----ccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 295 IIAGFVFSRC-LYLISVLSMER-----IMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 295 ~~~Gl~~~~l-~~~~~~~~~~~-----~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.++|+.++++ +.+.+++++.. ...|++|..+.++|||+-.-.+.+|+|
T Consensus 227 ~~lGv~~~~l~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI 280 (325)
T 1lcy_A 227 RYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVI 280 (325)
T ss_dssp EECCEEEEECCHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEE
T ss_pred cccceEeecCCHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEE
Confidence 3789999888 77777887753 357999999999999998888888876
No 352
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=64.36 E-value=12 Score=31.30 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=53.6
Q ss_pred EEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCCCCceeeeeEEeeeeeeeccCCCeEEeEEEEEe
Q 017471 34 TLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDA 113 (371)
Q Consensus 34 vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~~~~s~t~G~Vs~~~~~~~~~~~~~~~~i~~da 113 (371)
-+..+...||+|.+.+...- +.+|-..- .+-|+---+-...-+.++..-..-.++..+|.+.+.....+.-..
T Consensus 47 ~V~~~y~rDL~V~~t~a~G~-DtIarC~C------t~GvYYc~s~~k~yPV~~~~p~~~~iqeseYYP~ryQ~~vl~~~G 119 (166)
T 1z8r_A 47 CVWEDYNRDLLVSTTTAHGC-DTIARCQC------TTGVYFCASKSKHYPVSFEGPGLVEVQESEYYPKRYQSHVLLATG 119 (166)
T ss_dssp EEEEETTTTEEEEECSSCCC-CCBBCCCC------SEEEEEBTTTCSEEEEECBCCSEEEECSBTTBCSEEEESEEEEEC
T ss_pred ceeeeecccEEEEeccCCCC-Cccccccc------cCceEEEeecCcCcceEEcCCCeEEecccCCCchhhhccEEEEec
Confidence 45677788999998876531 12221111 111211000000001122222233344445666655566677788
Q ss_pred eccCCCCCCceecCCCcEEEEEeee
Q 017471 114 AINSGNSGGPAFNDKGKCVGIAFQS 138 (371)
Q Consensus 114 ~i~~G~SGGPlvn~~G~VIGI~~~~ 138 (371)
+..||.-||.|.-.. -||||.++.
T Consensus 120 ~~epGDCGG~L~C~H-GviGivTaG 143 (166)
T 1z8r_A 120 FSEPGDAGGILRCEH-GVIGLVTMG 143 (166)
T ss_dssp SSSCCCCBSEEECSS-SEEEEEEEE
T ss_pred CCCCCCCCceeeeCC-CceEEEecC
Confidence 999999999999865 699999874
No 353
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=61.26 E-value=38 Score=34.21 Aligned_cols=79 Identities=10% Similarity=0.122 Sum_probs=44.8
Q ss_pred ceEEEEECCCCccccCCCCCCEEEEECCEEecCCCCcccccccc-------chhhhhhh-----cc-CCCCEEEEEEEE-
Q 017471 199 GVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGER-------IGFSYLVS-----QK-YTGDSAAVKVLR- 264 (371)
Q Consensus 199 gv~V~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~-------~~~~~~~~-----~~-~~g~~v~l~v~R- 264 (371)
.++|.++.... + +++.||.|++|||+++..+-+-....++. .-...+.. .. -+-+.+++++.|
T Consensus 97 ~i~V~dv~~~~-s--~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~ 173 (583)
T 3dor_A 97 RFYFVDIMTFS-S--EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRP 173 (583)
T ss_dssp CEEEEEECSSC-C--SSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECT
T ss_pred cEEEEeccccc-c--CCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECC
Confidence 36676663222 2 69999999999999987653221100111 00011111 11 133578888755
Q ss_pred CCEEEEEEEEeccccc
Q 017471 265 DSKILNFNITLATHRR 280 (371)
Q Consensus 265 ~g~~~~~~v~l~~~~~ 280 (371)
+|+..+++++-...+.
T Consensus 174 ~G~~~~v~~pW~~~p~ 189 (583)
T 3dor_A 174 FGTTREVRVKWRYVPE 189 (583)
T ss_dssp TSCEEEEEEECEEECC
T ss_pred CCcEEEEEeeeEEccc
Confidence 5888888887665544
No 354
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=58.19 E-value=4.4 Score=30.52 Aligned_cols=47 Identities=6% Similarity=-0.131 Sum_probs=27.9
Q ss_pred eccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 296 IAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
++|+.++.. ......++. ....+++|..+.++|||+..- ...+|.|.
T Consensus 17 ~lG~~~~~~~~~~~~~~~~-~~~~g~~V~~V~~~spA~~aG~l~~GD~I~ 65 (103)
T 2fcf_A 17 SLGISIVGGRGMGSRLSNG-EVMRGIFIKHVLEDSPAGKNGTLKPGDRIV 65 (103)
T ss_dssp CCCEEEECCCC--------------EEEEEECSSSHHHHHCCCCTTCEEE
T ss_pred ceeEEEEccCCCCcccccC-CCCCCEEEEEeCCCCcHHHcCCCCCCCEEE
Confidence 478887655 333322222 234789999999999999887 88888764
No 355
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=56.31 E-value=33 Score=26.76 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=26.3
Q ss_pred CCEEEEEEecCC-CcCCccceecCCCC---CCCCeEEEEEeC
Q 017471 41 CIYTMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYP 78 (371)
Q Consensus 41 ~DlAlLkv~~~~-~~~~l~~~~l~~s~---~lgd~V~~iG~p 78 (371)
+|+||||++.+. |-+.+.|+.+.... ..++.+.+.|+-
T Consensus 86 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG 127 (131)
T 1yph_C 86 NDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWG 127 (131)
T ss_dssp SCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred CCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCC
Confidence 699999999753 33346677775432 346888888874
No 356
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=51.99 E-value=6.2 Score=29.71 Aligned_cols=48 Identities=10% Similarity=-0.002 Sum_probs=33.1
Q ss_pred eccEEEe-ch--HHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 296 IAGFVFS-RC--LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~-~l--~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.+|+.++ .. +.....+...+...|++|..+.++|||+..-...+|.|-
T Consensus 20 ~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~ 70 (104)
T 3sfj_A 20 ILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIM 70 (104)
T ss_dssp ECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEE
T ss_pred cccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEE
Confidence 4788776 22 111112333355688999999999999998888888763
No 357
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=51.67 E-value=8 Score=30.49 Aligned_cols=47 Identities=6% Similarity=-0.131 Sum_probs=30.2
Q ss_pred eccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 296 IAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
++|+.++.. +......+. ....+++|..+.++|||+..- ...+|.|.
T Consensus 37 ~lGi~v~~~~~~~~~~~~~-~~~~gv~V~~V~~~spA~~aG~L~~GD~Il 85 (123)
T 2iwq_A 37 SLGISIVGGRGMGSRLSNG-EVMRGIFIKHVLEDSPAGKNGTLKPGDRIV 85 (123)
T ss_dssp CCSEEEEECC----------CCCCSEEEEEECSSSHHHHHCCCCTTCEEE
T ss_pred CccEEEEeccCcccccccc-CCCCCEEEEEECCCChHHHcCCCCCCCEEE
Confidence 478887655 333222222 334689999999999999888 88888763
No 358
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=48.62 E-value=9.4 Score=29.29 Aligned_cols=26 Identities=8% Similarity=-0.129 Sum_probs=21.8
Q ss_pred cCceEEEEEecCChHhHHhhhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
..+++|..+.++|||+..-.+.+|.|
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~I 65 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQI 65 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEE
Confidence 46899999999999998777777765
No 359
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=47.89 E-value=7.9 Score=31.28 Aligned_cols=47 Identities=11% Similarity=0.026 Sum_probs=33.5
Q ss_pred eccEEEec---h-HHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 296 IAGFVFSR---C-LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~~---l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
++|+.++. . ++. ..++..+...+++|..+.++|||+-.-...+|+|.
T Consensus 39 ~lG~~i~~g~~~~~~~-~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~ 89 (139)
T 2vz5_A 39 ILGFSIGGGIDQDPSQ-NPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIM 89 (139)
T ss_dssp ECSEEEEECTTSCGGG-CSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEE
T ss_pred cccEEEEccccCChhh-hhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEE
Confidence 57887643 2 221 24444455689999999999999988888888764
No 360
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=43.10 E-value=4 Score=37.90 Aligned_cols=47 Identities=6% Similarity=-0.103 Sum_probs=37.0
Q ss_pred eeccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhH
Q 017471 295 IIAGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 295 ~~~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.|+|+.++++ +..++.++++ ...+++|..+.++|||+-.-.+.+|+|
T Consensus 221 ~~lGi~~~~~~~~~~~~~g~~-~~~g~~V~~V~~~spA~~aGL~~GD~I 268 (318)
T 1te0_A 221 GYIGIGGREIAPLHAQGGGID-QLQGIVVNEVSPDGPAANAGIQVNDLI 268 (318)
T ss_dssp EECCEEEEECSCCCSSSSCSS-SCCCEEEEEECTTSTTTTTCCCTTCCE
T ss_pred ccceeEeeecchhHHHhccCC-CCCcEEEEEeCCCChHHHCCCCCCCEE
Confidence 3899998877 5555566654 347899999999999998877888876
No 361
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=43.02 E-value=43 Score=23.77 Aligned_cols=33 Identities=9% Similarity=-0.177 Sum_probs=28.5
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+|+.+.+++.++|...|+.+=.....
T Consensus 16 ~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e~ 48 (77)
T 1i4k_A 16 PVIVRLKGGREFRGTLDGYDIHMNLVLLDAEEI 48 (77)
T ss_dssp EEEEEETTSCEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEEE
Confidence 456889999999999999999999998777653
No 362
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=42.88 E-value=19 Score=27.00 Aligned_cols=28 Identities=7% Similarity=-0.158 Sum_probs=23.4
Q ss_pred ccCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 316 IMNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 316 ~~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
...+++|..+.++|||+..- ...+|.|-
T Consensus 36 ~~~gv~V~~V~~~spA~~aG~L~~GD~I~ 64 (106)
T 3axa_A 36 DKLGIYVKSVVKGGAADVDGRLAAGDQLL 64 (106)
T ss_dssp SSEEEEEEEEBTTSHHHHHCCCCTTCEEE
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCCEEE
Confidence 34689999999999999887 88888764
No 363
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=41.11 E-value=34 Score=25.10 Aligned_cols=26 Identities=0% Similarity=-0.068 Sum_probs=22.3
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
.+++|..+.++|||+..- ...+|.|.
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~ 56 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQIL 56 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEE
Confidence 689999999999999887 78888763
No 364
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=40.89 E-value=38 Score=25.00 Aligned_cols=32 Identities=3% Similarity=-0.154 Sum_probs=27.8
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+|+.+.+++.++|...|+.|=....
T Consensus 16 ~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 16 RMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp EEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred cEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 45678899999999999999999999877654
No 365
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=40.34 E-value=37 Score=24.02 Aligned_cols=33 Identities=6% Similarity=-0.302 Sum_probs=28.4
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+|+.+.+++.++|+..|+.+=.....
T Consensus 16 ~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e~ 48 (75)
T 1h64_1 16 DVLVILKKGFEFRGRLIGYDIHLNVVLADAEMI 48 (75)
T ss_dssp EEEEEETTSEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEECCCCEEEEEEEEEeCCCCeEEeeEEEE
Confidence 456888999999999999999999998777653
No 366
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=37.93 E-value=47 Score=23.94 Aligned_cols=33 Identities=6% Similarity=-0.110 Sum_probs=28.6
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+|+.+.+++.++|+..|+.+=.....
T Consensus 21 ~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e~ 53 (81)
T 1th7_A 21 LVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEEI 53 (81)
T ss_dssp EEEEEETTTEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred eEEEEEcCCcEEEEEEEEEcCCCCEEEccEEEE
Confidence 455788999999999999999999998877654
No 367
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=36.72 E-value=49 Score=25.86 Aligned_cols=34 Identities=6% Similarity=-0.097 Sum_probs=29.4
Q ss_pred EEEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 18 LILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 18 ~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
-.+.+.+.+|+.+.|++.++|...|+.|=.....
T Consensus 40 k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E~ 73 (118)
T 1b34_B 40 TQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEM 73 (118)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEC
T ss_pred cEEEEEECCCcEEEEEEEEeCCceEEEEeCEEEE
Confidence 3566889999999999999999999999877654
No 368
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=36.33 E-value=48 Score=23.62 Aligned_cols=35 Identities=9% Similarity=-0.204 Sum_probs=29.5
Q ss_pred EEEEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 17 ALILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 17 g~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
|-.+.+.+.+|+.+.+++.++|+..|+.+=.....
T Consensus 14 ~k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e~ 48 (76)
T 3s6n_G 14 DKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEM 48 (76)
T ss_dssp CCEEEEEETTTEEEEEEEEEECTTCCEEEEEEEEC
T ss_pred CCeEEEEECCCcEEEEEEEEECCcceEEEeceEEE
Confidence 34456889999999999999999999998877654
No 369
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=36.31 E-value=4.1 Score=32.39 Aligned_cols=46 Identities=11% Similarity=0.054 Sum_probs=31.1
Q ss_pred ccEEEech-HHHHHHcCcccccCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 297 AGFVFSRC-LYLISVLSMERIMNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 297 ~Gl~~~~l-~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
+|+.++.. +.....+++. ...+++|+.+.++|||+..- ...+|.|-
T Consensus 44 lG~~i~~~~~~~~~~~g~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il 91 (128)
T 1nf3_C 44 LGFYIRDGSSVRVTPHGLE-KVPGIFISRLVPGGLAQSTGLLAVNDEVL 91 (128)
T ss_dssp CCEEEEEEEEEEEETTEEE-EEEEEEEEEECTTCHHHHHTCCCTTCEEE
T ss_pred ccEEEEccccccccccccC-CCCCEEEEEECCCCHHHHCCCCCCCCEEE
Confidence 67776543 2222233332 23689999999999999887 67888764
No 370
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=35.85 E-value=53 Score=23.83 Aligned_cols=33 Identities=6% Similarity=-0.242 Sum_probs=28.4
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+|+.+.+++.++|...|+.|=.....
T Consensus 27 ~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e~ 59 (83)
T 1mgq_A 27 PVIIKLKGDREFRGVLKSFDLHMNLVLNDAEEL 59 (83)
T ss_dssp EEEEEETTTEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEEcCCcEEEEEEEEECCCceeEEccEEEE
Confidence 456888999999999999999999998777653
No 371
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=35.49 E-value=68 Score=22.74 Aligned_cols=34 Identities=9% Similarity=-0.073 Sum_probs=28.9
Q ss_pred EEEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 18 LILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 18 ~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
-.+.+.+.+|+.+.+++.++|...|+.+=.+...
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e~ 49 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVT 49 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEEE
Confidence 3456788999999999999999999998877653
No 372
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=34.64 E-value=56 Score=23.12 Aligned_cols=32 Identities=6% Similarity=-0.094 Sum_probs=27.1
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+|+.+.+++.++|+..|+.+=....
T Consensus 16 ~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 4emk_B 16 KVLIRLSSGVDYKGILSCLDGYMNLALERTEE 47 (75)
T ss_dssp EEEEECTTSCEEEEEEEEECTTCEEEEEEEEE
T ss_pred eEEEEEcCCcEEEEEEEEEcCcceEEEccEEE
Confidence 45578889999999999999999998876543
No 373
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=34.62 E-value=37 Score=24.88 Aligned_cols=26 Identities=12% Similarity=-0.031 Sum_probs=22.3
Q ss_pred cCceEEEEEecCChHhHHhhhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
..+++|..+.++|||+..-.+.+|.|
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I 61 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTI 61 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEE
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEE
Confidence 35889999999999998878888876
No 374
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=34.51 E-value=65 Score=22.87 Aligned_cols=33 Identities=6% Similarity=-0.120 Sum_probs=27.6
Q ss_pred EEEEEecCC-CeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCS-PSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~-~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+| +.+.+++.++|+..|+.+=.....
T Consensus 17 ~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e~ 50 (77)
T 1ljo_A 17 IIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMEC 50 (77)
T ss_dssp EEEEEETTCSSEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEEECCcceEEEeeEEEE
Confidence 345678899 999999999999999998777653
No 375
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=34.29 E-value=63 Score=23.66 Aligned_cols=60 Identities=12% Similarity=0.004 Sum_probs=38.5
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIG 80 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g 80 (371)
.+.+.+.+|+.+.+++.++|...|+.|=..... .++-....++.-.--|+.|..++-|.+
T Consensus 18 ~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e~--~~g~~~~~lg~v~IRG~nI~~i~~~d~ 77 (86)
T 3s6n_F 18 PVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEY--IDGALSGHLGEVLIRCNNVLYIRGVEE 77 (86)
T ss_dssp EEEEEETTSCEEEEEEEEECTTCCEEEEEEEEE--ETTEEEEEESSEEECGGGEEEEEECC-
T ss_pred eEEEEEcCCeEEEEEEEEEcCceEEEEeeEEEE--cCCceeeEccEEEEeCCeEEEEEeCCc
Confidence 456788999999999999999999998777632 111122233321122466666666643
No 376
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=33.73 E-value=60 Score=25.24 Aligned_cols=32 Identities=6% Similarity=-0.022 Sum_probs=27.5
Q ss_pred EEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 20 LSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 20 i~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
+.+.+.+|+.+.+++.++|...|+.|=.....
T Consensus 36 V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E~ 67 (113)
T 4emk_C 36 IQATFTGGRQITGILKGFDQLMNLVLDDVEEQ 67 (113)
T ss_dssp EEEEETTSCEEEEEEEEECTTCCEEEEEEEEE
T ss_pred EEEEEeCCeEEEEEEEEEcCcccEEEeeEEEE
Confidence 44788899999999999999999998776653
No 377
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=33.17 E-value=54 Score=24.45 Aligned_cols=34 Identities=9% Similarity=-0.128 Sum_probs=28.6
Q ss_pred EEEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 18 LILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 18 ~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
-.+.+.+.+|+.+.+++.++|...|+.|=.....
T Consensus 20 ~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E~ 53 (93)
T 4emg_A 20 EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEEI 53 (93)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEECCcccEEeecEEEE
Confidence 3456788899999999999999999998776653
No 378
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=32.54 E-value=59 Score=23.40 Aligned_cols=32 Identities=9% Similarity=-0.142 Sum_probs=27.7
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+|+.+.+++.++|+..|+.|=....
T Consensus 23 ~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 23 QVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp EEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 45678889999999999999999998876654
No 379
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=32.51 E-value=87 Score=21.34 Aligned_cols=31 Identities=10% Similarity=-0.076 Sum_probs=27.5
Q ss_pred EEecCCCeEeEEEEEecCCCCEEEEEEecCC
Q 017471 22 TWLLCSPSAPSATLVTADICIYTMLTVEDDE 52 (371)
Q Consensus 22 ~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~~ 52 (371)
.+.-||+-|.|+|+.++....-+++++.+..
T Consensus 12 arwsDG~fYlGtI~~V~~~~~~clV~F~D~s 42 (58)
T 4hcz_A 12 ARWTDGLLYLGTIKKVDSAREVCLVQFEDDS 42 (58)
T ss_dssp EECTTSCEEEEEEEEEETTTTEEEEEETTSC
T ss_pred EEecCCCEEeEEEEEEecCCCEEEEEEcCCC
Confidence 5677899999999999999999999998753
No 380
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=30.95 E-value=42 Score=25.79 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=29.6
Q ss_pred EeEEEEEecCCCCEEEEEEecCCCcCCccceecC--C-CCCCCCeEEE-EEe
Q 017471 30 APSATLVTADICIYTMLTVEDDEFWEGVLPVEFG--E-LPALQDAVTV-VGY 77 (371)
Q Consensus 30 ~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~--~-s~~lgd~V~~-iG~ 77 (371)
+|++|+.++...+.|++.+.... ..+.+. + ...+||+|++ +|+
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv~-----reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGVR-----RDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTEE-----EEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCEE-----EEEEEEeecCCCCCCCEEEEeech
Confidence 69999999866689999887542 222222 2 3568999887 444
No 381
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=30.78 E-value=58 Score=24.40 Aligned_cols=32 Identities=6% Similarity=-0.044 Sum_probs=27.6
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+|+.+.|++.++|+..|+.|=....
T Consensus 22 ~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 22 RVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp EEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 45578899999999999999999999877654
No 382
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=30.27 E-value=58 Score=23.17 Aligned_cols=24 Identities=21% Similarity=0.434 Sum_probs=19.5
Q ss_pred CEEEEEEEECCEEEEEEEEecccc
Q 017471 256 DSAAVKVLRDSKILNFNITLATHR 279 (371)
Q Consensus 256 ~~v~l~v~R~g~~~~~~v~l~~~~ 279 (371)
-.+++.+.|+|++.++.+.+....
T Consensus 6 vditikiqrdgqeieidirvstgk 29 (96)
T 2jvf_A 6 VDITIKIQRDGQEIEIDIRVSTGK 29 (96)
T ss_dssp CEEEEEEEETTEEEEEEEECCSSS
T ss_pred EEEEEEEeeCCeEEEEEEEEcccH
Confidence 358899999999999998876543
No 383
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=29.79 E-value=95 Score=21.76 Aligned_cols=30 Identities=7% Similarity=-0.173 Sum_probs=26.7
Q ss_pred EEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 22 TWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 22 ~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.-||.-|+|+|+.++....-+++++.+.
T Consensus 22 A~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 22 ARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp EECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred EEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 444899999999999999999999999865
No 384
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=28.01 E-value=25 Score=25.40 Aligned_cols=26 Identities=12% Similarity=-0.147 Sum_probs=22.3
Q ss_pred cCceEEEEEecCChHhHHhhhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
..+++|..+.++|||+-.-.+.+|.|
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I 52 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRL 52 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEE
Confidence 35899999999999998877888766
No 385
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=27.89 E-value=75 Score=23.82 Aligned_cols=32 Identities=9% Similarity=-0.026 Sum_probs=27.4
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+|+.+.+++.++|...|+.|=....
T Consensus 32 ~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 32 NLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp EEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred eEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 45578889999999999999999999876654
No 386
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=27.80 E-value=1.7e+02 Score=22.66 Aligned_cols=62 Identities=10% Similarity=-0.052 Sum_probs=41.4
Q ss_pred EEEEEEecCCCeEeEEEEEecCCCCEEEEEEecCCCcCCccceecCCCCCCCCeEEEEEeCCCC
Q 017471 18 LILSTWLLCSPSAPSATLVTADICIYTMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGG 81 (371)
Q Consensus 18 ~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~s~~lgd~V~~iG~p~g~ 81 (371)
-.+.+.+.++..+.+++.++|...|+.|=.+.... .+-.+..++.-.--|+.|..+.-|...
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~--~~~~~~~lg~v~IRG~nI~~I~~pd~l 74 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTL--KNREPVQLETLSIRGNNIRYFILPDSL 74 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEEC--TTSCCEEEEEEEECGGGEEEEECCTTC
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEec--CCCceeEcceEEEcCCeEEEEEecccc
Confidence 35667889999999999999999999987776532 111222332211225777777777653
No 387
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=27.66 E-value=24 Score=25.86 Aligned_cols=26 Identities=0% Similarity=-0.158 Sum_probs=22.9
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
.+++|..+.++|||+..- ...+|.|.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~ 55 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVL 55 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEE
Confidence 589999999999999886 88888764
No 388
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=27.34 E-value=35 Score=34.99 Aligned_cols=50 Identities=16% Similarity=0.348 Sum_probs=29.4
Q ss_pred cCCCCCCceecC-CCc--EEEEEeeecccC-Cc----cce-----eccccCcchhHhHhhhhh
Q 017471 116 NSGNSGGPAFND-KGK--CVGIAFQSLKHE-DV----ENI-----GYVIPTPVIMHFIQDYEK 165 (371)
Q Consensus 116 ~~G~SGGPlvn~-~G~--VIGI~~~~~~~~-~~----~~~-----~~aiP~~~i~~~l~~L~~ 165 (371)
-.|+|||||+-. +|+ ++||++...... +. ... ++..-+....+++++..+
T Consensus 670 C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~ 732 (741)
T 3hrz_D 670 CRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQ 732 (741)
T ss_dssp CGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGGGSHHHHHHHTT
T ss_pred CcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhHHhHHHHHHHhc
Confidence 468999999853 343 999987654111 11 111 333446667777777654
No 389
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=27.11 E-value=24 Score=25.54 Aligned_cols=27 Identities=4% Similarity=-0.090 Sum_probs=23.0
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
..++++..+.++|||+..- ...+|.|.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~ 55 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQIL 55 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEE
Confidence 3689999999999999887 88888763
No 390
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=26.99 E-value=1e+02 Score=23.52 Aligned_cols=34 Identities=9% Similarity=-0.153 Sum_probs=29.1
Q ss_pred EEEEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 17 ALILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 17 g~vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
|-.+.+.+.+|+.+.+++.++|...|+.|=.+..
T Consensus 26 gk~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~e 59 (105)
T 4emh_A 26 GRPILVELKNGETFNGHLENCDNYMNLTLREVIR 59 (105)
T ss_dssp CCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEEEEEcCCceEEEEEEEE
Confidence 4456688999999999999999999999887764
No 391
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=26.91 E-value=27 Score=25.24 Aligned_cols=25 Identities=4% Similarity=-0.205 Sum_probs=22.2
Q ss_pred CceEEEEEecCChHhHHhhhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.+++|..+.++|||+..-...+|.|
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I 56 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRL 56 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEE
Confidence 6899999999999998888888876
No 392
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=26.10 E-value=32 Score=27.76 Aligned_cols=16 Identities=25% Similarity=0.372 Sum_probs=14.1
Q ss_pred CceecCCCcEEEEEee
Q 017471 122 GPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 122 GPlvn~~G~VIGI~~~ 137 (371)
-|++|.+|+++||.+.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6889999999999864
No 393
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=26.03 E-value=25 Score=25.41 Aligned_cols=25 Identities=8% Similarity=-0.233 Sum_probs=21.5
Q ss_pred CceEEEEEecCChHhHHhhhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.++++..+.++|||+..-...+|.|
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I 51 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRL 51 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEE
Confidence 5899999999999998877777765
No 394
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=25.97 E-value=28 Score=25.55 Aligned_cols=26 Identities=8% Similarity=-0.073 Sum_probs=22.3
Q ss_pred cCceEEEEEecCChHhHHhhhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
..+++|..+.++|||+..-...+|+|
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I 57 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRI 57 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEE
Confidence 35899999999999998888888766
No 395
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=25.97 E-value=50 Score=28.33 Aligned_cols=42 Identities=21% Similarity=0.463 Sum_probs=28.6
Q ss_pred cCCCCCCceecCCCcEEEEEeeecccCC-ccceeccccCcchhH
Q 017471 116 NSGNSGGPAFNDKGKCVGIAFQSLKHED-VENIGYVIPTPVIMH 158 (371)
Q Consensus 116 ~~G~SGGPlvn~~G~VIGI~~~~~~~~~-~~~~~~aiP~~~i~~ 158 (371)
..|.||+|++-..|++||+-.+..-..+ ....-| +|.+.+..
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~ 188 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLET 188 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eecccccc
Confidence 4788999999999999998665443333 234445 67655443
No 396
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=25.93 E-value=25 Score=25.40 Aligned_cols=26 Identities=12% Similarity=-0.057 Sum_probs=22.2
Q ss_pred CceEEEEEecCChHhHHhhhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.+++|..+.++|||+-.-...+|+|-
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~ 53 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEII 53 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEE
Confidence 58999999999999988778888763
No 397
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=25.75 E-value=30 Score=28.09 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=17.8
Q ss_pred CCCCCCceecCCCcEEEEEee
Q 017471 117 SGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 117 ~G~SGGPlvn~~G~VIGI~~~ 137 (371)
.+-++-|++|.+|+++|+.+.
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~ 67 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITE 67 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEG
T ss_pred cCCeEEEEEcCCccEEEEEEH
Confidence 466788999999999999864
No 398
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=25.60 E-value=34 Score=26.11 Aligned_cols=20 Identities=10% Similarity=0.076 Sum_probs=15.9
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++||.+.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44456889999999999864
No 399
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=25.11 E-value=71 Score=28.21 Aligned_cols=32 Identities=3% Similarity=-0.154 Sum_probs=27.2
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEec
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
.+.+.+.+++.+.+++.++|.+.||.|=....
T Consensus 16 rV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 16 RMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred eEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 45578899999999999999999998866554
No 400
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=25.08 E-value=30 Score=25.28 Aligned_cols=28 Identities=7% Similarity=-0.165 Sum_probs=24.0
Q ss_pred ccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 316 IMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 316 ~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
...+++|..+.++|||+..-...+|+|.
T Consensus 32 ~~~g~~V~~V~~~spA~~aGl~~GD~I~ 59 (97)
T 2w4f_A 32 DDEGIFISRVSEEGPAARAGVRVGDKLL 59 (97)
T ss_dssp TBCSEEEEEECTTSHHHHHTCCTTCEEE
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEE
Confidence 4578999999999999988888888764
No 401
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=24.83 E-value=31 Score=25.40 Aligned_cols=25 Identities=4% Similarity=-0.072 Sum_probs=21.7
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
.+++|..+.++|||+..- .+.+|.|
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I 56 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDII 56 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEE
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEE
Confidence 579999999999999887 7778765
No 402
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=24.65 E-value=36 Score=26.43 Aligned_cols=20 Identities=15% Similarity=0.194 Sum_probs=15.8
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++||.+.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34456888999999999864
No 403
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=24.45 E-value=28 Score=25.80 Aligned_cols=25 Identities=4% Similarity=-0.099 Sum_probs=21.7
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
.+++|..+.++|||+..- ...+|.|
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I 60 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQI 60 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEE
Confidence 589999999999999987 7777765
No 404
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=24.29 E-value=39 Score=25.75 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=14.7
Q ss_pred CCCceecCCCcEEEEEee
Q 017471 120 SGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 120 SGGPlvn~~G~VIGI~~~ 137 (371)
..=|++|.+|+++|+.+.
T Consensus 100 ~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 100 SVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SEEEEECTTCBEEEEEEH
T ss_pred cEEEEECCCCCEEEEEEH
Confidence 346899999999999864
No 405
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=24.15 E-value=30 Score=25.49 Aligned_cols=26 Identities=15% Similarity=-0.086 Sum_probs=22.2
Q ss_pred CceEEEEEecCChHhHHhhhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.++++..+.++|||+..-...+|.|.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~ 59 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLIT 59 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEE
Confidence 37789999999999998888888764
No 406
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=24.05 E-value=27 Score=25.31 Aligned_cols=26 Identities=12% Similarity=-0.097 Sum_probs=22.4
Q ss_pred CceEEEEEecCChHhHHhhhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.+++|..+.++|||+-.-...+|+|-
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~ 52 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVIT 52 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEE
Confidence 57899999999999988888888763
No 407
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=24.05 E-value=37 Score=26.11 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=15.7
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++||.+.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 44456788999999999864
No 408
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=23.98 E-value=67 Score=23.11 Aligned_cols=39 Identities=13% Similarity=0.030 Sum_probs=26.6
Q ss_pred EeEEEEEecCCCCEEEEEEecCCCcCCcccee--cCCCCCCCCeEEEE
Q 017471 30 APSATLVTADICIYTMLTVEDDEFWEGVLPVE--FGELPALQDAVTVV 75 (371)
Q Consensus 30 ~~A~vv~~d~~~DlAlLkv~~~~~~~~l~~~~--l~~s~~lgd~V~~i 75 (371)
+|++|+.+|. +.|.+.+.... ..+. +-+...+||+|++-
T Consensus 5 IP~kVvei~~--~~A~vd~~Gv~-----r~V~l~Lv~~~~vGD~VLVH 45 (75)
T 2z1c_A 5 VPGKVIEVNG--PVAVVDFGGVK-----REVRLDLMPDTKPGDWVIVH 45 (75)
T ss_dssp CCEEEEEEET--TEEEEEETTEE-----EEEECTTSTTCCTTCEEEEE
T ss_pred ccEEEEEECC--CEEEEEcCCEE-----EEEEEEEeCCCCCCCEEEEe
Confidence 5899999954 88998886532 2233 22445789999875
No 409
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=23.69 E-value=98 Score=23.03 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=28.4
Q ss_pred EEEEEEEecCC-CeEeEEEEEecCCCCEEEEEEec
Q 017471 17 ALILSTWLLCS-PSAPSATLVTADICIYTMLTVED 50 (371)
Q Consensus 17 g~vi~~~~~~~-~~~~A~vv~~d~~~DlAlLkv~~ 50 (371)
|-.+.+.+.+| +.+.+++.++|...|+.|=....
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 33455788999 99999999999999999877664
No 410
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=23.63 E-value=38 Score=25.89 Aligned_cols=20 Identities=10% Similarity=0.122 Sum_probs=15.6
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++|+.+.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 34456789999999999864
No 411
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=23.57 E-value=38 Score=25.95 Aligned_cols=20 Identities=15% Similarity=0.209 Sum_probs=14.6
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++|+.+.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34456788999999999864
No 412
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=23.49 E-value=33 Score=25.84 Aligned_cols=28 Identities=7% Similarity=-0.165 Sum_probs=24.3
Q ss_pred ccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 316 IMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 316 ~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
...+++|..+.++|||+..-...+|+|.
T Consensus 44 ~~~g~~V~~V~~~spA~~aGL~~GD~I~ 71 (110)
T 1x5q_A 44 DDEGIFISRVSEEGPAARAGVRVGDKLL 71 (110)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEE
T ss_pred CCCCEEEEEECCCCHHHHcCCCCCCEEE
Confidence 4578999999999999998888888774
No 413
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=23.11 E-value=23 Score=25.88 Aligned_cols=27 Identities=4% Similarity=-0.265 Sum_probs=22.8
Q ss_pred ccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 316 IMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 316 ~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
...+++|..+.++|||+- -...+|.|.
T Consensus 33 ~~~gv~V~~V~~~spA~~-gL~~GD~I~ 59 (95)
T 1mfg_A 33 DDDGIFVTRVQPEGPASK-LLQPGDKII 59 (95)
T ss_dssp TCCCEEEEEECTTSTTTT-TCCTTCEEE
T ss_pred CCCCEEEEEECCCCchhh-CCCCCCEEE
Confidence 346899999999999999 888888764
No 414
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=22.94 E-value=31 Score=25.01 Aligned_cols=25 Identities=0% Similarity=-0.048 Sum_probs=21.7
Q ss_pred ceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 319 MKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 319 ~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
+++|+.+.++|||+..- ...+|.|-
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il 47 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIIL 47 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEE
Confidence 79999999999999986 88888763
No 415
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=22.93 E-value=35 Score=25.27 Aligned_cols=27 Identities=0% Similarity=-0.105 Sum_probs=23.0
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
..+++|..+.++|||+..- ...+|.|.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~ 60 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVL 60 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEE
Confidence 4689999999999999887 78888764
No 416
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=22.78 E-value=31 Score=27.01 Aligned_cols=25 Identities=4% Similarity=-0.132 Sum_probs=22.3
Q ss_pred CceEEEEEecCChHhHHhhhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.+++|..+.++|||+..-.+.+|.|
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~I 75 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQI 75 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEE
Confidence 6899999999999999888888876
No 417
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=22.74 E-value=29 Score=24.84 Aligned_cols=26 Identities=0% Similarity=-0.092 Sum_probs=22.1
Q ss_pred CceEEEEEecCChHhHHhhhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.++++..+.++|||+-.-...+|.|.
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~ 51 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIV 51 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEE
Confidence 58999999999999987777787763
No 418
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=22.72 E-value=35 Score=25.52 Aligned_cols=25 Identities=4% Similarity=0.013 Sum_probs=22.0
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
.+++|..+.++|||+..- ...+|.|
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~I 61 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEI 61 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEE
Confidence 589999999999999987 7788876
No 419
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=22.65 E-value=1.1e+02 Score=22.74 Aligned_cols=27 Identities=4% Similarity=-0.091 Sum_probs=24.0
Q ss_pred cCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 25 LCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 25 ~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+|+++.+++.++|...|+.|=.....
T Consensus 38 ~~gr~~~G~L~gfD~~mNlvL~d~~E~ 64 (92)
T 3s6n_E 38 QVNMRIEGCIIGFDEYMNLVLDDAEEI 64 (92)
T ss_dssp SCSSEEEEEEEEECTTCCEEEEEEEEE
T ss_pred cCCEEEEEEEEEEcCcCcEEEeeeEEE
Confidence 899999999999999999998777653
No 420
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=22.51 E-value=1.2e+02 Score=24.14 Aligned_cols=33 Identities=3% Similarity=-0.094 Sum_probs=28.5
Q ss_pred EEEEEecCCCeEeEEEEEecCCCCEEEEEEecC
Q 017471 19 ILSTWLLCSPSAPSATLVTADICIYTMLTVEDD 51 (371)
Q Consensus 19 vi~~~~~~~~~~~A~vv~~d~~~DlAlLkv~~~ 51 (371)
.+.+.+.+|+.+.+++.++|...|+.|=.....
T Consensus 12 ~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E~ 44 (130)
T 1m5q_A 12 EVQVVLSNGEVYKGVLHAVDNQLNIVLANASNK 44 (130)
T ss_dssp EEEEEETTSCEEEEEEEEECTTCCEEEEEEECT
T ss_pred eEEEEECCCcEEEEEEEEEcccceeEEeeEEEE
Confidence 455788999999999999999999998877654
No 421
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=22.43 E-value=32 Score=25.25 Aligned_cols=27 Identities=4% Similarity=-0.085 Sum_probs=23.0
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
..+++|..+.++|||+..- ...+|.|.
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~ 63 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRIL 63 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEE
Confidence 4589999999999999887 78888763
No 422
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=22.35 E-value=34 Score=25.58 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=22.4
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
..+++|..+.++|||+..- .+.+|.|
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I 58 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKL 58 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEE
Confidence 4689999999999999887 7888866
No 423
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.25 E-value=35 Score=25.26 Aligned_cols=39 Identities=10% Similarity=-0.128 Sum_probs=29.4
Q ss_pred eccEEEechHHHHHHcCcccccCceEEEEEecCChHhHHhhhhhhhHH
Q 017471 296 IAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 296 ~~Gl~~~~l~~~~~~~~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
++|+.+.... +...+++|..+.++|||+..-...+|+|.
T Consensus 23 ~lG~~~~~~~---------~~~~gv~V~~V~~~spA~~aGL~~GD~I~ 61 (100)
T 2eeh_A 23 RLGFSVRGGS---------EHGLGIFVSKVEEGSSAERAGLCVGDKIT 61 (100)
T ss_dssp SCSEEEECCT---------TTTCCEEEEEECTTSHHHHHTCCSSCEEE
T ss_pred CccEEEEccc---------cCCCCEEEEEECCCCHHHHcCCCCCCEEE
Confidence 4788876531 11358999999999999988888888764
No 424
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=22.17 E-value=34 Score=25.75 Aligned_cols=26 Identities=12% Similarity=0.031 Sum_probs=22.5
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
..+++|..+.++|||+..- ...+|.|
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~I 57 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKL 57 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEE
Confidence 3589999999999999987 8888866
No 425
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=22.14 E-value=19 Score=33.43 Aligned_cols=49 Identities=4% Similarity=-0.012 Sum_probs=0.0
Q ss_pred eccEEEech-HHHHHHc-----CcccccCceEEEEEecCChHhHHhhhhhhhHHH
Q 017471 296 IAGFVFSRC-LYLISVL-----SMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWC 344 (371)
Q Consensus 296 ~~Gl~~~~l-~~~~~~~-----~~~~~~~~~~v~~~~~~Sp~~~~~~~~~~~~~~ 344 (371)
|+|+.++++ +...+++ +++....|++|..+.++|||+-.-.+.+|+|--
T Consensus 226 ~lGi~~~~~~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ 280 (332)
T 3num_A 226 YIGIRMMSLTSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIIS 280 (332)
T ss_dssp -------------------------------------------------------
T ss_pred ccceEEEecCHHHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEE
Confidence 788877665 3333232 233445789999999999999888888888743
No 426
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=21.98 E-value=35 Score=24.71 Aligned_cols=28 Identities=14% Similarity=-0.021 Sum_probs=23.1
Q ss_pred ccCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 316 IMNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 316 ~~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
...+++|..+.++|||+..- ...+|.|.
T Consensus 31 ~~~gv~V~~V~~~spA~~aG~l~~GD~I~ 59 (94)
T 2fe5_A 31 GDNSIYITKIIEGGAAQKDGRLQIGDRLL 59 (94)
T ss_dssp TBCCEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCCEEE
Confidence 34689999999999999877 77777763
No 427
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=21.91 E-value=52 Score=31.83 Aligned_cols=25 Identities=28% Similarity=0.529 Sum_probs=18.2
Q ss_pred ccCCCCCCceecC-CCc--EEEEEeeec
Q 017471 115 INSGNSGGPAFND-KGK--CVGIAFQSL 139 (371)
Q Consensus 115 i~~G~SGGPlvn~-~G~--VIGI~~~~~ 139 (371)
.-.|+|||||+-. +|+ ++||++...
T Consensus 427 ~C~GDSGGPL~~~~~~~~~l~GIvS~g~ 454 (497)
T 1rrk_A 427 TCRGDSGGPLIVHKRSRFIQVGVISWGV 454 (497)
T ss_dssp CCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred CCCCCCCCeeEEEeCCEEEEEEEEEecC
Confidence 3468999999853 453 899987654
No 428
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=21.89 E-value=46 Score=24.80 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=16.0
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+.+--|++|.+|+++|+.+.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44556899999999999864
No 429
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=21.48 E-value=37 Score=25.58 Aligned_cols=27 Identities=4% Similarity=-0.052 Sum_probs=23.0
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
..+++|..+.++|||+..- ...+|.|.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~ 62 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRIL 62 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEE
Confidence 4689999999999999887 88888763
No 430
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=21.10 E-value=46 Score=26.07 Aligned_cols=20 Identities=10% Similarity=0.041 Sum_probs=16.1
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++|+.+.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44556899999999999864
No 431
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=21.10 E-value=45 Score=26.56 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=15.9
Q ss_pred CCCCCceecCCCcEEEEEee
Q 017471 118 GNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 118 G~SGGPlvn~~G~VIGI~~~ 137 (371)
+..--|++|.+|+++||.+.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 44456889999999999864
No 432
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=21.05 E-value=65 Score=25.29 Aligned_cols=30 Identities=3% Similarity=-0.116 Sum_probs=25.6
Q ss_pred EEEEecCCCeEeEEEEEecCCCCEEEEEEe
Q 017471 20 LSTWLLCSPSAPSATLVTADICIYTMLTVE 49 (371)
Q Consensus 20 i~~~~~~~~~~~A~vv~~d~~~DlAlLkv~ 49 (371)
+.+.+.+|+.+.+++.++|...|+.|=...
T Consensus 41 V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 41 IYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp CEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred EEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 447888999999999999999999876544
No 433
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=20.83 E-value=39 Score=24.93 Aligned_cols=25 Identities=8% Similarity=-0.132 Sum_probs=22.1
Q ss_pred CceEEEEEecCChHhHHhhhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
.+++|..+.++|||+..-...+|+|
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I 59 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQI 59 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEE
Confidence 6899999999999999888888876
No 434
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=20.83 E-value=43 Score=27.00 Aligned_cols=22 Identities=18% Similarity=0.148 Sum_probs=17.7
Q ss_pred cCCCCCCceecCCCcEEEEEee
Q 017471 116 NSGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 116 ~~G~SGGPlvn~~G~VIGI~~~ 137 (371)
..|-|+=|++|.+|+++|+.+.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 3577889999999999999864
No 435
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=20.80 E-value=36 Score=24.88 Aligned_cols=27 Identities=7% Similarity=-0.085 Sum_probs=22.5
Q ss_pred cCceEEEEEecCChHhHHh-hhhhhhHH
Q 017471 317 MNMKLRSSFWTSSCIQCHN-CQMSSLLW 343 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~-~~~~~~~~ 343 (371)
..+++|..+.++|||+..- ...+|.|-
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~ 58 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLL 58 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEE
Confidence 4689999999999999886 77777653
No 436
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=20.70 E-value=38 Score=25.25 Aligned_cols=26 Identities=12% Similarity=-0.143 Sum_probs=22.6
Q ss_pred CceEEEEEecCChHhHHhhhhhhhHH
Q 017471 318 NMKLRSSFWTSSCIQCHNCQMSSLLW 343 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~~~~~~~~~ 343 (371)
.+++|..+.++|||+..-...+|.|-
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~ 66 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVL 66 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEE
Confidence 68999999999999988888888764
No 437
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=20.68 E-value=55 Score=32.19 Aligned_cols=46 Identities=15% Similarity=0.121 Sum_probs=29.8
Q ss_pred EEECCCCccccCCCCCCEEEEECCEEecCCCCccccccccchhhhhhhc
Q 017471 203 RRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 251 (371)
Q Consensus 203 ~~V~~~spA~~GL~~GDvIl~vnG~~V~~~~~l~~~~~~~~~~~~~~~~ 251 (371)
.-..+|.|.....||||||++.||+.|.=.+.= ..+|+.+.+.+..
T Consensus 300 i~~~ENm~sg~A~rPgDVits~~GkTVEV~NTD---AEGRLVLADaL~y 345 (482)
T 3ij3_A 300 IPAVENAIGSRSYRPGDVVQTRARKTIEITNTD---AEGRVVLADALAE 345 (482)
T ss_dssp EEEEEECCSTTCCCTTCEEECTTSCEEECSCTT---CCHHHHHHHHHHH
T ss_pred EEeeccCCCCCCCCCCCEEEeCCCCEEEEecCC---cchhhhhHHHHHH
Confidence 334456666556899999999999987422210 1267777666554
No 438
>1hmj_A RPB5, protein (subunit H); RNA polymerase, archaea; NMR {Methanocaldococcus jannaschii} SCOP: d.78.1.1
Probab=20.68 E-value=37 Score=24.69 Aligned_cols=20 Identities=15% Similarity=0.237 Sum_probs=14.8
Q ss_pred EECCCCcccc--CCCCCCEEEE
Q 017471 204 RVDPTAPESE--VLKPSDIILS 223 (371)
Q Consensus 204 ~V~~~spA~~--GL~~GDvIl~ 223 (371)
.+..+-|+++ |+++||+|--
T Consensus 36 rI~~~DPvar~~G~k~GdVvkI 57 (78)
T 1hmj_A 36 KIYEDDPVIQEIGAKEGDVVRV 57 (78)
T ss_pred eeeCcCHhhHHhCCCCCCEEEE
Confidence 3555667777 9999998843
No 439
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=20.68 E-value=42 Score=26.55 Aligned_cols=21 Identities=14% Similarity=0.126 Sum_probs=16.7
Q ss_pred CCCCCCceecCCCcEEEEEee
Q 017471 117 SGNSGGPAFNDKGKCVGIAFQ 137 (371)
Q Consensus 117 ~G~SGGPlvn~~G~VIGI~~~ 137 (371)
.+..--|++|.+|+++||.+.
T Consensus 114 ~~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 114 HRVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TTCSCEEEECTTSCEEEEECH
T ss_pred cCCcEEEEEeCCCCEEEEeeH
Confidence 355567899999999999864
No 440
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=20.67 E-value=33 Score=25.05 Aligned_cols=26 Identities=8% Similarity=-0.207 Sum_probs=22.0
Q ss_pred cCceEEEEEecCChHhHHhhhhhhhH
Q 017471 317 MNMKLRSSFWTSSCIQCHNCQMSSLL 342 (371)
Q Consensus 317 ~~~~~v~~~~~~Sp~~~~~~~~~~~~ 342 (371)
..+++|..+.++|||+-.-...+|.|
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I 54 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRL 54 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEE
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEE
Confidence 35899999999999998877777766
No 441
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=20.59 E-value=33 Score=25.98 Aligned_cols=25 Identities=4% Similarity=-0.072 Sum_probs=21.8
Q ss_pred CceEEEEEecCChHhHHh-hhhhhhH
Q 017471 318 NMKLRSSFWTSSCIQCHN-CQMSSLL 342 (371)
Q Consensus 318 ~~~~v~~~~~~Sp~~~~~-~~~~~~~ 342 (371)
.|++|..+.++|||+..- .+.+|+|
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~I 50 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDII 50 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEE
Confidence 579999999999999987 7788876
Done!