Query 017478
Match_columns 371
No_of_seqs 188 out of 399
Neff 3.2
Searched_HMMs 46136
Date Fri Mar 29 08:55:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017478.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017478hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14379 Myb_CC_LHEQLE: MYB-CC 99.9 1.2E-24 2.7E-29 163.1 7.0 50 126-175 2-51 (51)
2 PLN03162 golden-2 like transcr 99.9 2.1E-23 4.5E-28 206.8 6.4 61 30-91 231-291 (526)
3 TIGR01557 myb_SHAQKYF myb-like 99.8 2.9E-21 6.2E-26 146.5 6.5 56 34-89 1-56 (57)
4 PF00249 Myb_DNA-binding: Myb- 97.2 0.00096 2.1E-08 47.8 5.6 48 36-87 1-48 (48)
5 smart00426 TEA TEA domain. 91.1 0.24 5.2E-06 40.0 3.2 46 38-85 5-67 (68)
6 PF14379 Myb_CC_LHEQLE: MYB-CC 88.3 1.1 2.3E-05 34.5 4.7 34 140-174 6-39 (51)
7 PF15235 GRIN_C: G protein-reg 79.9 1.4 3E-05 39.9 2.4 20 146-165 70-89 (137)
8 PF12776 Myb_DNA-bind_3: Myb/S 58.8 12 0.00027 29.4 3.3 51 38-88 1-63 (96)
9 PF01519 DUF16: Protein of unk 56.3 37 0.00081 29.6 6.0 23 149-171 69-91 (102)
10 smart00501 BRIGHT BRIGHT, ARID 51.8 14 0.0003 29.8 2.6 46 41-87 32-84 (93)
11 smart00717 SANT SANT SWI3, AD 39.1 1.1E+02 0.0024 20.0 5.5 44 37-85 2-45 (49)
12 cd00167 SANT 'SWI3, ADA2, N-Co 36.0 1.2E+02 0.0027 19.6 5.2 43 38-85 1-43 (45)
13 PF07384 DUF1497: Protein of u 35.1 31 0.00067 27.1 2.1 22 37-58 36-57 (59)
14 TIGR02894 DNA_bind_RsfA transc 26.2 36 0.00077 31.7 1.3 52 31-88 43-94 (161)
15 PF01285 TEA: TEA/ATTS domain 25.7 38 0.00083 35.4 1.6 54 32-86 45-112 (431)
16 TIGR02399 salt_tol_Pase glucos 24.4 1.3E+02 0.0029 31.5 5.1 29 141-172 163-191 (389)
No 1
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=99.91 E-value=1.2e-24 Score=163.08 Aligned_cols=50 Identities=78% Similarity=1.075 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhc
Q 017478 126 SHMVDAIRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTLA 175 (371)
Q Consensus 126 ~~i~EALrmQmEVQrrLHEQLEVQRhLQLRIEAQGKYLQsILEKAqetLa 175 (371)
..++||||+||||||||||||||||+||+|||||||||++|||+|+++++
T Consensus 2 ~~i~EALr~QmEvQrrLhEQLEvQr~Lqlrieaqgkyl~~ilek~~~~~s 51 (51)
T PF14379_consen 2 MQITEALRMQMEVQRRLHEQLEVQRHLQLRIEAQGKYLQSILEKAQKALS 51 (51)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC
Confidence 35789999999999999999999999999999999999999999999874
No 2
>PLN03162 golden-2 like transcription factor; Provisional
Probab=99.88 E-value=2.1e-23 Score=206.84 Aligned_cols=61 Identities=48% Similarity=0.759 Sum_probs=57.7
Q ss_pred cCCCCCCcccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhhhhcCCC
Q 017478 30 TTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQ 91 (371)
Q Consensus 30 s~~~KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQKYRl~~~ 91 (371)
...+|+||+||+|||++||+||++|| .++||||+||++|+|+|||++||||||||||+.++
T Consensus 231 ~g~KKpRLrWTpELH~rFVeAV~qLG-~dKATPK~ILelMnV~GLTRenVKSHLQKYRl~rk 291 (526)
T PLN03162 231 PGKKKAKVDWTPELHRRFVHAVEQLG-VEKAFPSRILELMGVQCLTRHNIASHLQKYRSHRR 291 (526)
T ss_pred CCCCCCcccCCHHHHHHHHHHHHHhC-cCccchHHHHHHcCCCCcCHHHHHHHHHHHHHhcc
Confidence 34679999999999999999999999 79999999999999999999999999999999874
No 3
>TIGR01557 myb_SHAQKYF myb-like DNA-binding domain, SHAQKYF class. This model describes a DNA-binding domain restricted to (but common in) plant proteins, many of which also contain a response regulator domain. The domain appears related to the Myb-like DNA-binding domain described by Pfam model pfam00249. It is distinguished in part by a well-conserved motif SH[AL]QKY[RF] at the C-terminal end of the motif.
Probab=99.84 E-value=2.9e-21 Score=146.54 Aligned_cols=56 Identities=59% Similarity=0.976 Sum_probs=54.2
Q ss_pred CCCcccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhhhhcC
Q 017478 34 KPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLG 89 (371)
Q Consensus 34 KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQKYRl~ 89 (371)
|+|++||+|+|++|++||+.||+.+.||||.|++.|++++||+.||+|||||||+.
T Consensus 1 k~r~~WT~eeh~~Fl~ai~~~G~g~~a~pk~I~~~~~~~~lT~~qV~SH~QKy~~k 56 (57)
T TIGR01557 1 KPRVVWTEDLHDRFLQAVQKLGGPDWATPKRILELMVVDGLTRDQVASHLQKYRLK 56 (57)
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcccchHHHHHHcCCCCCCHHHHHHHHHHHHcc
Confidence 78999999999999999999998799999999999999999999999999999975
No 4
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=97.21 E-value=0.00096 Score=47.84 Aligned_cols=48 Identities=33% Similarity=0.434 Sum_probs=41.0
Q ss_pred CcccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhhhh
Q 017478 36 RLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFR 87 (371)
Q Consensus 36 RLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQKYR 87 (371)
|-.||+|=++.|++||.++|. + .-+.|-+.|+ .+-|..++++|.++|+
T Consensus 1 r~~Wt~eE~~~l~~~v~~~g~-~--~W~~Ia~~~~-~~Rt~~qc~~~~~~~~ 48 (48)
T PF00249_consen 1 RGPWTEEEDEKLLEAVKKYGK-D--NWKKIAKRMP-GGRTAKQCRSRYQNLL 48 (48)
T ss_dssp S-SS-HHHHHHHHHHHHHSTT-T--HHHHHHHHHS-SSSTHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHhCC-c--HHHHHHHHcC-CCCCHHHHHHHHHhhC
Confidence 568999999999999999992 1 4789999998 7899999999999985
No 5
>smart00426 TEA TEA domain.
Probab=91.05 E-value=0.24 Score=39.99 Aligned_cols=46 Identities=20% Similarity=0.273 Sum_probs=29.6
Q ss_pred ccCHHHHHHHHHHHHhhCCCCCCChh-HHHhh---h-----------CCCCc--cHHHHHHhhhh
Q 017478 38 RWTVELHERFVDAVTQLGGPDKATPK-TIMRV---M-----------GVKGL--TLYHLKSHLQK 85 (371)
Q Consensus 38 rWT~ELH~rFV~AV~qLGG~dkAtPK-~IL~l---M-----------~V~gL--T~~hVkSHLQK 85 (371)
+|.++|-..|++|+...= ...+=| .+... . ...|. |+.+|.||+|.
T Consensus 5 vWp~~lE~Af~~aL~~~~--~~g~~kik~~~r~k~~gRNelIs~YI~~~tGk~Rt~KQVsShIQv 67 (68)
T smart00426 5 VWSPDIEQAFQEALAIYP--PCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQV 67 (68)
T ss_pred cCcHHHHHHHHHHHHHcC--ccCcccchhhhcCcccchhHHHHHHHHHHhCCccchhhhcchhee
Confidence 699999999999998775 222222 12111 1 12444 78889999984
No 6
>PF14379 Myb_CC_LHEQLE: MYB-CC type transfactor, LHEQLE motif
Probab=88.29 E-value=1.1 Score=34.52 Aligned_cols=34 Identities=35% Similarity=0.441 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHh
Q 017478 140 RRLHEQLEVQRHLQLRIEAQGKYMQSILEKACQTL 174 (371)
Q Consensus 140 rrLHEQLEVQRhLQLRIEAQGKYLQsILEKAqetL 174 (371)
--|..|+||||+|.=.+|.| |-||.=+|...+-|
T Consensus 6 EALr~QmEvQrrLhEQLEvQ-r~Lqlrieaqgkyl 39 (51)
T PF14379_consen 6 EALRMQMEVQRRLHEQLEVQ-RHLQLRIEAQGKYL 39 (51)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhHHH
Confidence 45777888888888888877 55665555554444
No 7
>PF15235 GRIN_C: G protein-regulated inducer of neurite outgrowth C-terminus
Probab=79.88 E-value=1.4 Score=39.92 Aligned_cols=20 Identities=25% Similarity=0.498 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHhHHHHH
Q 017478 146 LEVQRHLQLRIEAQGKYMQS 165 (371)
Q Consensus 146 LEVQRhLQLRIEAQGKYLQs 165 (371)
+.||+||+++||+|++....
T Consensus 70 ~AIQkHLE~qi~e~~~q~~~ 89 (137)
T PF15235_consen 70 MAIQKHLERQIEEHERQRAP 89 (137)
T ss_pred HHHHHHHHHHHHHhhhcccc
Confidence 35799999999999886643
No 8
>PF12776 Myb_DNA-bind_3: Myb/SANT-like DNA-binding domain; InterPro: IPR024752 This domain, found in a range of uncharacterised proteins, may be related to Myb/SANT-like DNA binding domains.
Probab=58.77 E-value=12 Score=29.37 Aligned_cols=51 Identities=20% Similarity=0.294 Sum_probs=34.9
Q ss_pred ccCHHHHHHHHHHHHhh---CCC-CCCChh-----HHHhhhCC---CCccHHHHHHhhhhhhc
Q 017478 38 RWTVELHERFVDAVTQL---GGP-DKATPK-----TIMRVMGV---KGLTLYHLKSHLQKFRL 88 (371)
Q Consensus 38 rWT~ELH~rFV~AV~qL---GG~-dkAtPK-----~IL~lM~V---~gLT~~hVkSHLQKYRl 88 (371)
+||++..+-||+.+-+. |.- .....| .|.+.++- -.+|..||++|+...|.
T Consensus 1 ~Wt~~~~~~ll~~~~e~~~~g~~~~~~~fk~~~w~~i~~~~~~~~~~~~t~~qlknk~~~lk~ 63 (96)
T PF12776_consen 1 SWTPEMTRFLLDLLIEQINKGNRPTNGGFKKEGWNNIAEEFNEKTGLNYTKKQLKNKWKTLKK 63 (96)
T ss_pred CCChHHHHHHHHHHHHHHHhCCCCCCCCcCHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHH
Confidence 69999999999998443 433 233333 36665553 45688999999886654
No 9
>PF01519 DUF16: Protein of unknown function DUF16; InterPro: IPR002862 Proteins that contain this domain are of unknown function. It appears to be confined to proteins from Mycoplasma pneumoniae [].; PDB: 2BA2_C.
Probab=56.33 E-value=37 Score=29.56 Aligned_cols=23 Identities=39% Similarity=0.458 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHH
Q 017478 149 QRHLQLRIEAQGKYMQSILEKAC 171 (371)
Q Consensus 149 QRhLQLRIEAQGKYLQsILEKAq 171 (371)
=+.||.+|.+||+-|++|++.-+
T Consensus 69 Ikel~~e~k~qgktL~~I~~~L~ 91 (102)
T PF01519_consen 69 IKELQVEQKAQGKTLQLILKTLQ 91 (102)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999987543
No 10
>smart00501 BRIGHT BRIGHT, ARID (A/T-rich interaction domain) domain. DNA-binding domain containing a helix-turn-helix structure
Probab=51.81 E-value=14 Score=29.77 Aligned_cols=46 Identities=26% Similarity=0.439 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCC----hhHHHhhhCCCCc---cHHHHHHhhhhhh
Q 017478 41 VELHERFVDAVTQLGGPDKAT----PKTIMRVMGVKGL---TLYHLKSHLQKFR 87 (371)
Q Consensus 41 ~ELH~rFV~AV~qLGG~dkAt----PK~IL~lM~V~gL---T~~hVkSHLQKYR 87 (371)
-+|++.|+ +|..+||.++.+ =+.|.+.||++.- ...+|++|-.||=
T Consensus 32 vdL~~Ly~-~V~~~GG~~~v~~~~~W~~Va~~lg~~~~~~~~~~~lk~~Y~k~L 84 (93)
T smart00501 32 LDLYRLYR-LVQERGGYDQVTKDKKWKEIARELGIPDTSTSAASSLRKHYERYL 84 (93)
T ss_pred CcHHHHHH-HHHHccCHHHHcCCCCHHHHHHHhCCCcccchHHHHHHHHHHHHh
Confidence 47999998 588999987544 2468899998752 3567888888773
No 11
>smart00717 SANT SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains.
Probab=39.13 E-value=1.1e+02 Score=20.04 Aligned_cols=44 Identities=20% Similarity=0.303 Sum_probs=32.1
Q ss_pred cccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhh
Q 017478 37 LRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQK 85 (371)
Q Consensus 37 LrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQK 85 (371)
-.||++=...|+.+|.++| . ..=+.|-+.|+ +=|...|+.+-..
T Consensus 2 ~~Wt~~E~~~l~~~~~~~g-~--~~w~~Ia~~~~--~rt~~~~~~~~~~ 45 (49)
T smart00717 2 GEWTEEEDELLIELVKKYG-K--NNWEKIAKELP--GRTAEQCRERWNN 45 (49)
T ss_pred CCCCHHHHHHHHHHHHHHC-c--CCHHHHHHHcC--CCCHHHHHHHHHH
Confidence 4699999999999999999 1 22355666654 6677777776443
No 12
>cd00167 SANT 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.
Probab=36.03 E-value=1.2e+02 Score=19.62 Aligned_cols=43 Identities=23% Similarity=0.350 Sum_probs=32.2
Q ss_pred ccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhh
Q 017478 38 RWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQK 85 (371)
Q Consensus 38 rWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQK 85 (371)
.||.|=+..|+.++.++|- ..=+.|-+.|+ +=|..+|+.|..+
T Consensus 1 ~Wt~eE~~~l~~~~~~~g~---~~w~~Ia~~~~--~rs~~~~~~~~~~ 43 (45)
T cd00167 1 PWTEEEDELLLEAVKKYGK---NNWEKIAKELP--GRTPKQCRERWRN 43 (45)
T ss_pred CCCHHHHHHHHHHHHHHCc---CCHHHHHhHcC--CCCHHHHHHHHHH
Confidence 4999999999999999992 23456777664 3577778777554
No 13
>PF07384 DUF1497: Protein of unknown function (DUF1497); InterPro: IPR009972 This entry is represented by Bacteriophage r1t, Orf17. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several phage and bacterial proteins of around 59 residues in length. Members of this family seem to be found exclusively in Lactococcus lactis and the bacteriophages that infect this organism. The function of this family is unknown.
Probab=35.09 E-value=31 Score=27.12 Aligned_cols=22 Identities=23% Similarity=0.620 Sum_probs=19.2
Q ss_pred cccCHHHHHHHHHHHHhhCCCC
Q 017478 37 LRWTVELHERFVDAVTQLGGPD 58 (371)
Q Consensus 37 LrWT~ELH~rFV~AV~qLGG~d 58 (371)
-+++.|+|..|-+-|.+|||-+
T Consensus 36 ~kfnqem~aefheri~klggk~ 57 (59)
T PF07384_consen 36 NKFNQEMQAEFHERIKKLGGKN 57 (59)
T ss_pred hHhhHHHHHHHHHHHHHhcccc
Confidence 3678999999999999999853
No 14
>TIGR02894 DNA_bind_RsfA transcription factor, RsfA family. In a subset of endospore-forming members of the Firmcutes, members of this protein family are found, several to a genome. Two very strongly conserved sequences regions are separated by a highly variable linker region. Much of the linker region was excised from the seed alignment for this model. A characterized member is the prespore-specific transcription RsfA from Bacillus subtilis, previously called YwfN, which is controlled by sigma factor F and seems to fine-tune expression of some genes in the sigma-F regulon. A paralog in Bacillus subtilis is designated YlbO.
Probab=26.23 E-value=36 Score=31.74 Aligned_cols=52 Identities=21% Similarity=0.329 Sum_probs=37.6
Q ss_pred CCCCCCcccCHHHHHHHHHHHHhhCCCCCCChhHHHhhhCCCCccHHHHHHhhhhhhc
Q 017478 31 TDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88 (371)
Q Consensus 31 ~~~KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~IL~lM~V~gLT~~hVkSHLQKYRl 88 (371)
|.....|||+..+-.++.+||...- -.+-.++.. ...||+..|-+-||.|..
T Consensus 43 TsAACGFRWNs~VRkqY~~~i~~AK-kqRk~~~~~-----~~~ltl~~vI~fLq~l~~ 94 (161)
T TIGR02894 43 TAAACGFRWNAYVRKQYEEAIELAK-KQRKELKRE-----AGSLTLQDVISFLQNLKT 94 (161)
T ss_pred cHHHhcchHHHHHHHHHHHHHHHHH-HHHhccccC-----cccCCHHHHHHHHHHHHh
Confidence 4456899999999999999997543 111111111 256999999999999864
No 15
>PF01285 TEA: TEA/ATTS domain family; InterPro: IPR000818 Transcriptional enhancer activators are nuclear proteins that contain a TEA/ATTSdomain, a DNA-binding region of 66-68 amino acids. The TEA/ATTS domain is found in the N-termini of certain gene regulatory proteins, such as the Simian virus 40 (SV40) enhancer factor TEF-1, yeast trans-acting factor TEC-1 (which is required for TY1 enhancer activity), and the Aspergillus abaA regulatory gene product. SV40 and retroviral enhancers, and those to which TEF-1, TEC-1 and abaA proteins bind, contain GT-IIC sites: the TEA/ATTS domain may therefore recognise and bind such sites. Secondary structure predictions suggest the presence of 3 helices, but have not confirmed the presence of the helix-turn-helix motif characteristic of many DNA-binding proteins: DNA-binding may therefore be effected by a different mechanism [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3L15_B 2HZD_A 3KYS_A 3JUA_C 4EAZ_B.
Probab=25.73 E-value=38 Score=35.44 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=28.0
Q ss_pred CCCCCcccCHHHHHHHHHHHHhhCCCCCCChhH--------------HHhhhCCCCccHHHHHHhhhhh
Q 017478 32 DPKPRLRWTVELHERFVDAVTQLGGPDKATPKT--------------IMRVMGVKGLTLYHLKSHLQKF 86 (371)
Q Consensus 32 ~~KpRLrWT~ELH~rFV~AV~qLGG~dkAtPK~--------------IL~lM~V~gLT~~hVkSHLQKY 86 (371)
+.+..-+|++++...|++|+...==-...+-+. |...-| .-=|+.+|.||+|..
T Consensus 45 ~~~~~~vw~~~~e~af~~al~~~~~~g~~k~~~~~~~~grn~li~~yi~~~tg-~~rt~kqvsshiqvl 112 (431)
T PF01285_consen 45 DGDGEGVWPPDIEQAFQEALAIYPPCGRRKLSDEGKMYGRNELISDYIKLKTG-KTRTRKQVSSHIQVL 112 (431)
T ss_dssp -GGGS--S-HHHHHHHHHHHHHS-SSS---HHHH-----THHHHHHHHHHHHS-----SHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCCCCCcccccccccccchhHHHHHHHHHhC-cccchhHHHHHHHHH
Confidence 456788999999999999997763111122110 111111 223678888998877
No 16
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=24.40 E-value=1.3e+02 Score=31.49 Aligned_cols=29 Identities=24% Similarity=0.355 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 017478 141 RLHEQLEVQRHLQLRIEAQGKYMQSILEKACQ 172 (371)
Q Consensus 141 rLHEQLEVQRhLQLRIEAQGKYLQsILEKAqe 172 (371)
.+++..|+|+.||..++ +-|+.+|++|..
T Consensus 163 ~v~~d~~~~~~LQ~~~~---~lM~~Ll~~A~~ 191 (389)
T TIGR02399 163 LVKDDSEIRKILQKSFE---DLMNELMYKAKT 191 (389)
T ss_pred HccchHHHHHHHHHHHH---HHHHHHHHHHHh
Confidence 46677788888888887 578999999865
Done!