BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017480
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9BY42|RTF2_HUMAN Protein RTF2 homolog OS=Homo sapiens GN=RTFDC1 PE=1 SV=3
Length = 306
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 146/271 (53%), Gaps = 28/271 (10%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+IK +K++ +KLS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ RMEE +L+ K +K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIMLNGTKEDVDVLKTRMEERRLRAKLEKK 198
Query: 269 KKVKNGEDCVGE-DVAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVN----GASG 323
K + V + DV+ ++ S K G E S + K ++ K +N G +G
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTAMNESSSGKAG 258
Query: 324 NP---AVKRFKAADMAPPNANKQVYASIFTS 351
P A KR A + + Y S+FT+
Sbjct: 259 KPPCGATKRSIA-----DSEESEAYKSLFTT 284
>sp|Q5R9P9|RTF2_PONAB Protein RTF2 homolog OS=Pongo abelii GN=RTFDC1 PE=2 SV=1
Length = 306
Score = 135 bits (339), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 145/271 (53%), Gaps = 28/271 (10%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+IK +K++ +KLS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ RMEE +L+ K +K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVDVLKTRMEERRLRAKLEKK 198
Query: 269 KKVKNGEDCVGE-DVAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVN----GASG 323
K + V + DV+ ++ S K G E S + K ++ K N G +G
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEEASLDSREKKTNLAPKSTATNESSSGKAG 258
Query: 324 NP---AVKRFKAADMAPPNANKQVYASIFTS 351
P A KR A + + Y S+FT+
Sbjct: 259 KPPCGATKRSIA-----DSEESEAYKSLFTT 284
>sp|Q4R594|RTF2_MACFA Protein RTF2 homolog OS=Macaca fascicularis GN=RTFDC1 PE=2 SV=1
Length = 306
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 144/271 (53%), Gaps = 28/271 (10%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+IK +K++ +KLS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NG E++ VL+ RMEE +L+ K +K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTNEDVDVLKARMEERRLRAKLEKK 198
Query: 269 KKVKNGEDCVGE-DVAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVN----GASG 323
K + V + DV+ ++ S K G E S + K ++ K N G +G
Sbjct: 199 TKKPKAAESVSKPDVSEEAPGPSKVKTGKPEETSLDSREKKNNLAPKSAATNESFSGKAG 258
Query: 324 NP---AVKRFKAADMAPPNANKQVYASIFTS 351
P A KR A + + Y S+FT+
Sbjct: 259 KPLCGATKRSIA-----DSEESEAYKSLFTT 284
>sp|Q3T1J8|RTF2_RAT Protein RTF2 homolog OS=Rattus norvegicus GN=Rtfdc1 PE=2 SV=1
Length = 306
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 144/271 (53%), Gaps = 28/271 (10%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEVLRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+I+ +K++ +KLS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 TSHIRSIKNVTELKLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKV-KEKK 267
CG V S +ALKE+K+ C C F E D I++NG +E++ +L+ RMEE +L+ EKK
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKRRMEERRLRAKLEKK 198
Query: 268 VKKVKNGEDCVGEDVAVDSLRVSGAKRGAVENKSGEKALAKVDV----NGKVGNVNGASG 323
KK K E ++ DS S AK G E + K + G+ +G G
Sbjct: 199 TKKPKTAESASKLGISQDSAGPSKAKAGKSEEADPDPREKKSSLAPRGTASNGSASGKVG 258
Query: 324 NP---AVKRFKAADMAPPNANKQVYASIFTS 351
P A+KR A + + Y SIFTS
Sbjct: 259 KPPCGALKRSIA-----DSEESETYKSIFTS 284
>sp|Q0VCR1|RTF2_BOVIN Protein RTF2 homolog OS=Bos taurus GN=RTFDC1 PE=2 SV=1
Length = 299
Score = 132 bits (333), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 141/264 (53%), Gaps = 21/264 (7%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+IK +K++ ++LS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NG +E++ VL+ R+EE +L+ K K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVEVLKSRIEERRLRAKLGKK 198
Query: 269 KKVKNGEDCVGE-DVAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVNGASGNPAV 327
K + V + +V+ ++ S K G E S + K + K +G + A
Sbjct: 199 TKKPKVAESVSKSEVSEETPGPSKVKTGKPEETSLDTREKKTNSAPKSAAAHGITSGKAA 258
Query: 328 KRFKAADMAPPNANKQVYASIFTS 351
KR A + + Y S+FT+
Sbjct: 259 KRSIA-----DSEESEAYKSLFTT 277
>sp|A5GFW7|RTF2_PIG Protein RTF2 homolog OS=Sus scrofa GN=RTFDC1 PE=2 SV=1
Length = 306
Score = 132 bits (331), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 18/266 (6%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSSEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+IK +K++ ++LS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSIKNVTELRLSDNPAWEGDKGSTKGDKHDDLQRARFICPVVGLEMNGRHRFCYLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NG +E++++L+ RMEE +L+ K K
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEDDVIVLNGTKEDVAMLQTRMEERRLRAKLGKK 198
Query: 269 KKVKNGEDCVGE-DVAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVNGASGNPAV 327
K + V + D++ ++ S K G E S + K + +G+S A
Sbjct: 199 TKKPKAAESVSKSDISEEAPGPSKMKAGKPEETSLDSREKKTSSAPRSAAAHGSSSGKAG 258
Query: 328 KRFKAAD--MAPPNANKQVYASIFTS 351
K A + + Y S+FT+
Sbjct: 259 KPVCGAPKRSIADSGESEAYKSLFTT 284
>sp|Q99K95|RTF2_MOUSE Protein RTF2 homolog OS=Mus musculus GN=Rtfdc1 PE=2 SV=1
Length = 307
Score = 129 bits (323), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 107/175 (61%), Gaps = 15/175 (8%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKN----LPKQ 159
KK +K+D + + +++W C LS E LR P V +LG ++NK+A++ LL K+ L K
Sbjct: 19 KKVEKVDKDAELVAQWNYCTLSQEILRRPIVACELGRLYNKDAVIEFLLDKSAEKALGKA 78
Query: 160 YSYIKGLKDLINVKLSRVPGAEEN-----GDG------IRFQCPITGLEFNGKYRFVAMR 208
S+I+ +K++ ++LS P E + GD RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIRSIKNVTELRLSDNPAWEGDKGNTKGDKHDDLQRARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKV 263
CG V S +ALKE+K+ C C F E D I++NG +E++ +L++RMEE +L+
Sbjct: 139 CCGCVFSERALKEIKAEVCHTCGAAFQEEDIIVLNGTKEDVEMLKKRMEERRLRA 193
>sp|Q5ZJN1|RTF2_CHICK Protein RTF2 homolog OS=Gallus gallus GN=RTFDC1 PE=2 SV=1
Length = 306
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 143/288 (49%), Gaps = 53/288 (18%)
Query: 104 KKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKNLPKQ---- 159
+K K+D + +++W C LS E L P V +LG ++NK+A++ LL K+ K
Sbjct: 19 RKAVKVDKTAELVARWYYCTLSQEKLCRPIVACELGRLYNKDAVIEFLLDKSADKTPMEA 78
Query: 160 YSYIKGLKDLINVKLSRVP---GAEENGDG--------IRFQCPITGLEFNGKYRFVAMR 208
S+IK LK++ + L+ P G +E+ G RF CP+ GLE NG++RF +R
Sbjct: 79 ASHIKSLKNVTELNLADNPAWSGDKESKKGDTYDDIQSARFICPVVGLEMNGRHRFCFLR 138
Query: 209 TCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRERMEEEKLKVKEKKV 268
CG V S +ALKE+K+ C C F E D I++NGN+E++ VL++RME+ +LK K +K
Sbjct: 139 NCGCVFSERALKEIKTEVCHKCGVPFQEEDVIILNGNKEDVEVLKKRMEDRRLKSKLEKK 198
Query: 269 ----------------------KKVKNGEDCVGEDVAVDSLRVSGAKRGAVENKSGEKAL 306
KVKN +DC+ SG KR + KS +
Sbjct: 199 SKKCKSAESAAQQVTTEDSPGPSKVKNSKDCIASS--------SGEKRHIIFTKSSDDRS 250
Query: 307 AKVDVNGKVGNVNGASGNPAVKRFKAADMAPPNANKQVYASIFTSSKK 354
+ V G VN AS A KR AD A N + +S+K+
Sbjct: 251 SSVP-----GKVNKAS--TATKR-SIADTATRNLRHTNLFTTHSSAKR 290
>sp|Q54IS6|RTF2_DICDI Protein RTF2 homolog OS=Dictyostelium discoideum GN=rtfdc1 PE=3
SV=1
Length = 273
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 29/202 (14%)
Query: 83 GGDGGATGAESRDCYLNMYAEKKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIF 142
G DGG C L +K+ D ++ KW CAL+ + L EP V+D LG +F
Sbjct: 2 GLDGGTIPTR---CELVKTKKKEVKVFDKDQVDFGKWFLCALAQDTLSEPIVLDDLGNLF 58
Query: 143 NKEALVHALLSKNL--PKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEF-N 199
NK+ ++ ALL+ +L K +S+I+ L+ + V S P E++ + CPIT +E +
Sbjct: 59 NKDNIIEALLNGSLETSKNFSHIRSLRSIYTVNFSPNPAHEKDSTVSPWLCPITKIEVGS 118
Query: 200 GKYRFVAMRTCGHVLSTKALKEVKSS-----------------------SCLVCHEEFGE 236
Y+F ++TCGHV S KA KE+K+ SC +C +E+
Sbjct: 119 SNYKFKFLKTCGHVFSEKAFKELKNDDSNNNNNNNNNNKKEIDSSKDNLSCFLCSKEYIT 178
Query: 237 MDKILINGNEEEISVLRERMEE 258
D I IN + EE ++ ++E
Sbjct: 179 NDLITINPSGEEFEQMKVTLQE 200
>sp|Q10154|RTF2_SCHPO Replication termination factor 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rtf2 PE=1 SV=1
Length = 240
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 24/205 (11%)
Query: 83 GGDGGATGAESRDCYLNMYAEKKPDKIDP------NEQRLSKWCNCALSNEPLREPCVID 136
G DGG+ + K+P K+ P + S++ CA+++EPL P V
Sbjct: 2 GNDGGSLPTRNE-------LVKEPGKVPPLDIDFKRSVKSSQFSQCAITDEPLYPPIVSC 54
Query: 137 KLGTIFNKEALVHALLSKN-LPKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITG 195
LG ++NK +++ LL ++ +PK S+IK LKD++ +++ ++ + + CPIT
Sbjct: 55 GLGKLYNKASILQMLLDRSSVPKSPSHIKSLKDVVQLQVEL-----DDSGKVLWLCPITR 109
Query: 196 LEFNGKYRFVAMRTCGHVLSTKALKEVKSSSCLVCHEEFGEMDKILINGNEEEISVLRER 255
+ Y+F + CGHV ALK+ C C++ + E D I IN N E++ L +R
Sbjct: 110 HVMSDTYQFAYIVPCGHVFEYSALKQFGEKMCFQCNQVYEEKDVIPINPNAEQLKTLSKR 169
Query: 256 MEEEKLKVKEKKVKKV-----KNGE 275
+ + L K + K KNG+
Sbjct: 170 LLDLALSEKTHSLNKASKKSNKNGD 194
>sp|Q13356|PPIL2_HUMAN Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2
PE=1 SV=1
Length = 520
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 97 YLNMYAEKKPDKIDPNEQRLSKWCNCALSNEPLREP-CVIDKLGTIFNKEALVHALLSKN 155
Y + Y KKPD N +RL + +C+LS +P P C D G +F+ +V L
Sbjct: 18 YTHFYGGKKPDLPQTNFRRLP-FDHCSLSLQPFVYPVCTPD--GIVFDLLNIVPWLKKYG 74
Query: 156 L-PKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVL 214
P + G + LI + S+ N +G ++ CP+ F VA+RT G+V
Sbjct: 75 TNPSNGEKLDG-RSLIKLNFSK------NSEG-KYHCPVLFTVFTNNTHIVAVRTTGNVY 126
Query: 215 STKALKEV----KSSSCLVCHEEFGEMDKILI 242
+ +A++++ K+ L+ E F D I +
Sbjct: 127 AYEAVEQLNIKAKNFRDLLTDEPFSRQDIITL 158
>sp|P52012|CYP4_CAEEL Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans
GN=cyn-4 PE=1 SV=3
Length = 523
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 121 NCALSNEPLREPCVIDKLGTIFNKEALVHALLSKNLPKQYSYIKGL--KDLINVKLSRVP 178
+C+LS P +P V + G IF+ A+V L K K K L KDLI++K +
Sbjct: 44 HCSLSLLPFEDP-VCARSGEIFDLTAIVPYL--KKHGKNPCTGKPLVAKDLIHLKFDK-- 98
Query: 179 GAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEV 222
G+ +F+CP+T F +A+ T G+V S +A++E+
Sbjct: 99 -----GEDGKFRCPVTFRTFTDHSHILAIATSGNVYSHEAVQEL 137
>sp|Q9FJX0|PPIL2_ARATH Peptidyl-prolyl cis-trans isomerase-like 2 OS=Arabidopsis thaliana
GN=PUB49 PE=2 SV=1
Length = 595
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 23/168 (13%)
Query: 114 QRLSKWCNCALSNEPLREP-CVIDKLGTIFNKEALVHAL--LSKNLPKQYSYIKGLKDLI 170
+ L +C CAL+ P +P C ID G++F +V + K+ P + +KG +DLI
Sbjct: 35 KSLPYYC-CALTFLPFEDPVCTID--GSVFEITTIVPYIRKFGKH-PVTGAPLKG-EDLI 89
Query: 171 NVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVLSTKALKEV----KSSS 226
+ + N +G + CP+ F VA++T G+V +A+KE+ K+
Sbjct: 90 PLIFHK------NSEG-EYHCPVLNKVFTEFTHIVAVKTTGNVFCYEAIKELNIKTKNWK 142
Query: 227 CLVCHEEFGEMDKILI---NGNEEEISVLRERMEEEKLKVKEKKVKKV 271
L+ E F D I I N + +++V + + + LK+ ++++KK+
Sbjct: 143 ELLTEEPFTRADLITIQNPNAVDGKVTVEFDHV-KNGLKIDDEELKKM 189
>sp|Q9D787|PPIL2_MOUSE Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2
PE=2 SV=2
Length = 521
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 15/151 (9%)
Query: 97 YLNMYAEKKPDKIDPNEQRLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVHALLSKNL 156
Y + Y +KPD + +RL + +C+LS +P P V G +F+ +V L
Sbjct: 18 YTHFYGGRKPDISQTSFRRLP-FDHCSLSLQPFVYP-VCTPEGVVFDLLNIVPWLKKYGT 75
Query: 157 -PKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHVLS 215
P + G K LI + ++ N +G ++ CP+ F VA+RT G+V +
Sbjct: 76 NPSTGEKLDG-KSLIKLNFAK------NSEG-QYHCPVLYSVFTDNTHIVAIRTTGNVYT 127
Query: 216 TKALKEV----KSSSCLVCHEEFGEMDKILI 242
+A++++ K+ L+ E F D I +
Sbjct: 128 YEAVEQLNIKAKNLRDLLTDEPFSRQDIITL 158
>sp|Q6H3D4|PA2HE_TRIST Basic phospholipase A2 homolog Ts-K49a OS=Trimeresurus stejnegeri
PE=1 SV=1
Length = 138
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 43 LSSLYFTLNGKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGDGGATGAESRDCYLNMYA 102
++ L + G +++ +F+ P ++ L G GG A R CY++
Sbjct: 7 MAVLLLGVEGSVIELGKMIFQETGKNPATSYGLYGCNCGPGGRRKPKDATDRCCYVHKCC 66
Query: 103 EKKPDKIDPNEQRLS-KWCN----CALSNEPLREPCVIDKLGTIFNKEAL 147
KK DP + R S W N C N L+E C DK I +E L
Sbjct: 67 YKKLTDCDPIKDRYSYSWVNKAIVCGEDNPCLKEMCECDKAVAICFRENL 116
>sp|P70090|PA2H5_TRIGA Basic phospholipase A2 homolog 5 OS=Trimeresurus gramineus PE=1
SV=1
Length = 138
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 43 LSSLYFTLNGKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGDGGATGAESRDCYLNMYA 102
++ L + G +++ +F+ P ++ L G GG A R CY++
Sbjct: 7 MAVLLLGVEGSVIELGKMIFQETGKNPATSYGLYGCNCGPGGRRKPKDATDRCCYVHKCC 66
Query: 103 EKKPDKIDPNEQRLS-KWCN----CALSNEPLREPCVIDKLGTIFNKEAL 147
KK DP + R S W N C N L+E C DK I +E L
Sbjct: 67 YKKLTDCDPIKDRYSYSWVNKAIVCGEDNPCLKEMCECDKAVAICFRENL 116
>sp|P05161|ISG15_HUMAN Ubiquitin-like protein ISG15 OS=Homo sapiens GN=ISG15 PE=1 SV=5
Length = 165
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 27 ETLNHLKRSLLSLDQSLSSLYF-TLNGKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGD 85
+T+ HLK+ + L+ L++ T GK L++ PL + + PLST+++ R+ GGG +
Sbjct: 102 QTVAHLKQQVSGLEGVQDDLFWLTFEGKPLEDQLPLGEY-GLKPLSTVFMNLRLRGGGTE 160
Query: 86 GGA 88
G
Sbjct: 161 PGG 163
>sp|P85207|DLDH_THESS Dihydrolipoyl dehydrogenase OS=Thermus scotoductus (strain ATCC
700910 / SA-01) GN=lpd PE=1 SV=2
Length = 461
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 54/117 (46%), Gaps = 19/117 (16%)
Query: 237 MDKILINGNEEEISVLRERMEEEKLKVK--------EKK-------VKKVKNGEDCVGED 281
M +IL G+ E ++LR+ +E+E LKV+ EKK ++ + G E+
Sbjct: 198 MPEILPAGDRETAALLRKALEKEGLKVRTGTKAVGYEKKQDGLHVLLEAAQGGSQ---EE 254
Query: 282 VAVDSLRVSGAKRGAVENKSGEKALAKVDVNGKVGNVNGASGNPAVKRFKAADMAPP 338
+ VD + V+ +R E EKA KVD G + VN A + D+A P
Sbjct: 255 IVVDKILVAVGRRPRTEGLGLEKAGVKVDERGFI-QVNARMETSAPGVYAIGDVARP 310
>sp|Q99P25|TXIP1_MOUSE Translin-associated factor X-interacting protein 1 OS=Mus musculus
GN=Tsnaxip1 PE=1 SV=2
Length = 704
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 25/138 (18%)
Query: 20 TVGANQFETLNHLKRSLLSLD-QSLSSLYFTLNGKILDESTPLFKNPQIAPLSTLYLRQR 78
+V NQ +TL+HL + LLS+D Q+ S+ IL + PL K QI L
Sbjct: 514 SVYINQKKTLSHLLKELLSVDTQNEGSITMEQFSTILKTTFPLKKEEQIQEL------ME 567
Query: 79 VFGGGGDGGATGAESRDCYLNMYAEKKPDKIDPNEQRLSKW-------------CNCALS 125
G G D T + Y +++ E + + +P QRL W L
Sbjct: 568 AVGWGPDSSNTDMLN---YRSLFNEDEEGQSEPFVQRL--WEQYESDKEAYLEELKQELD 622
Query: 126 NEPLREPCVIDKLGTIFN 143
+PL + ++ GT+ N
Sbjct: 623 LDPLEDVTLLKMRGTLMN 640
>sp|Q9VWV8|NOSIP_DROME Nitric oxide synthase-interacting protein homolog OS=Drosophila
melanogaster GN=CG6179 PE=3 SV=1
Length = 307
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 101 YAEKKPDKID----PNEQRLSK-----WCNCALSNEPLREPCVIDKLGTIFNKEALVHAL 151
Y EKK D + N QRL K + C+L+ +P R P VI K G +F+KEA++ +
Sbjct: 16 YNEKKRDAAESGYGTNAQRLGKDSVKSFDCCSLTLQPCRRP-VITKDGYLFDKEAILQYI 74
Query: 152 LSK 154
++K
Sbjct: 75 VTK 77
>sp|Q5W794|DI192_ORYSJ Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp.
japonica GN=DI19-2 PE=2 SV=2
Length = 233
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 10/82 (12%)
Query: 154 KNLPKQYSYIKGLKDLINVKLSRVPGAEENGDGIRFQCPITGLEFNGKYRFVAMRTCGHV 213
+ L +Y G D + V E G G + CP G +F+ FVA C HV
Sbjct: 22 RRLQARYDLYMGFDDADAAGVEEV---EARGGGEAYNCPFCGEDFD----FVAF--CCHV 72
Query: 214 LSTKALKEVKSSSCLVCHEEFG 235
A+ E KS C +C G
Sbjct: 73 DDEHAV-EAKSGVCPICATRVG 93
>sp|Q6JK69|PA2H1_BOTAT Phospholipase A2 homolog 1 OS=Bothrops atrox PE=1 SV=1
Length = 138
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 43 LSSLYFTLNGKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGDGGATGAESRDCYLNMYA 102
++ L + G +++ + + PL++ G GG G A R CY++
Sbjct: 7 MAVLLVGVEGSLVELGKMILQETGKNPLTSYGAYGCNCGVGGRGKPKDATDRCCYVHKCC 66
Query: 103 EKKPDKIDPNEQRLS-KWCN----CALSNEPLREPCVIDKLGTIFNKEAL 147
KK DP + R S W + C N L+E C DK I +E L
Sbjct: 67 YKKMTDCDPKKDRYSYSWKDKTIVCGEKNSCLKELCECDKAVAICLRENL 116
>sp|O35090|ALBU_MERUN Serum albumin OS=Meriones unguiculatus GN=ALB PE=2 SV=1
Length = 609
Score = 32.3 bits (72), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 18/105 (17%)
Query: 52 GKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGDGGATGAESRDCYLNMYAEKKPDKIDP 111
G + DE PL + PQ S L +++ G+ G A L Y +K P P
Sbjct: 396 GHVFDEFKPLVEEPQNLVKSNCELYEKL----GEYGFQNA-----VLVRYTKKAPQVSTP 446
Query: 112 NEQ-------RLSKWCNCALSNEPLREPCVIDKLGTIFNKEALVH 149
R+ C CAL E R PCV D L I N+ L+H
Sbjct: 447 TLVEAARSLGRVGTHC-CALP-EKKRLPCVEDYLSAILNRVCLLH 489
>sp|Q9I834|PA2H2_BOTMO Basic phospholipase A2 homolog 2 OS=Bothrops moojeni PE=1 SV=2
Length = 122
Score = 32.3 bits (72), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 81 GGGGDGGATGAESRDCYLNMYAEKKPDKIDPNEQRLS-KWCN----CALSNEPLREPCVI 135
G GG G A R CY++ KK DP + R S W + C +N L+E C
Sbjct: 29 GVGGRGKPKDATDRCCYVHKCCYKKLTGCDPKKDRYSYSWKDKTIVCGENNSCLKELCEC 88
Query: 136 DKLGTIFNKEALVHALLSKNLPKQYSYIK 164
DK I L L + N +Y+Y+K
Sbjct: 89 DKAVAI----CLRENLDTYNKKYRYNYLK 113
>sp|Q6H3D3|PA2HG_TRIST Basic phospholipase A2 homolog Ts-K49c OS=Trimeresurus stejnegeri
PE=1 SV=1
Length = 138
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 43 LSSLYFTLNGKILDESTPLFKNPQIAPLSTLYLRQRVFGGGGDGGATGAESRDCYLNMYA 102
++ L + G +++ +F+ P ++ L G GG A R CY++
Sbjct: 7 MAVLLLGVEGSVIELGKMIFQETGKNPATSYGLYGCNCGPGGRRKPKDATDRCCYVHKCC 66
Query: 103 EKKPDKIDPNEQRLS-KWCN----CALSNEPLREPCVIDKLGTIFNKEAL 147
KK DP + R S W N C N +E C DK I +E L
Sbjct: 67 YKKLTDCDPIKDRYSYSWVNKAIVCGEDNPCPKEMCECDKAVAICFRENL 116
>sp|A0QQ71|PHND_MYCS2 Phosphate-import protein PhnD OS=Mycobacterium smegmatis (strain
ATCC 700084 / mc(2)155) GN=phnD PE=1 SV=1
Length = 321
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 23/134 (17%)
Query: 79 VFGGGGDGGATGAESRDCYLNMYAEKKPDK--IDPNE----QRLSKWCNCALSNEPLRE- 131
+F GG D A + DC + DK ID + Q + W + ++
Sbjct: 192 IFAGGHDSSALAIANGDCDAGFAFDTMVDKTMIDKGDLKPGQLKTVWKSDMIAGSVFAAN 251
Query: 132 ----PCVIDKLGTIFNKEALVHALLSKNLPKQYSYIKGLKDLINVKLSR----VPGAEEN 183
P VIDKL T+F ++A V + ++ + +G D + R VP + +
Sbjct: 252 DALGPEVIDKLKTMFAQDANVKSF------EEEGFCEG--DACRITDERAWGVVPVTDAD 303
Query: 184 GDGIRFQCPITGLE 197
DG+R C +TG E
Sbjct: 304 YDGVRHVCDVTGSE 317
>sp|Q119N9|MOAA_TRIEI Cyclic pyranopterin monophosphate synthase OS=Trichodesmium
erythraeum (strain IMS101) GN=moaA PE=3 SV=1
Length = 328
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 120 CN-CALSNEPLREPCVIDKLGTIFNKEALVHALLSKNLPKQYSYIKGLKDLINVK 173
CN LS + PC+++++G I K +L + + + L +Q Y+ GLK IN K
Sbjct: 255 CNRMRLSADGWLRPCLLNEIGQIDLKSSLRNGISVEELRQQVEYLLGLKPEINFK 309
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 137,732,540
Number of Sequences: 539616
Number of extensions: 6083460
Number of successful extensions: 18939
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 18888
Number of HSP's gapped (non-prelim): 83
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 62 (28.5 bits)