AmiGO: BLAST Results


BLAST match view associations BLAST with HDA9 HDA9 HDA9 AT3G44680	protein from Arabidopsis thaliana	2.5e-186
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Bos taurus	7.2e-133
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	protein from Mus musculus	9.2e-133
BLAST match view associations BLAST with Hdac1l Hdac1l Hdac1l histone deacetylase 1-like	gene from Rattus norvegicus	9.2e-133
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Uncharacterized protein	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Gallus gallus	2.0e-130
BLAST match view associations BLAST with LOC100622482 LOC100622482 LOC100622482 Histone deacetylase	protein from Sus scrofa	1.3e-129
BLAST match view associations BLAST with hdac1 hdac1 hdac1 histone deacetylase 1	gene_product from Danio rerio	4.3e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Gallus gallus	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Sus scrofa	5.5e-128
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Strongylocentrotus purpuratus	7.0e-128
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	protein from Mus musculus	1.5e-127
BLAST match view associations BLAST with hdaA hdaA hdaA type-1 histone deacetylase	gene from Dictyostelium discoideum	3.8e-127
BLAST match view associations BLAST with HD1 HD1 HD1 AT4G38130	protein from Arabidopsis thaliana	1.9e-125
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	2.4e-125
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Gallus gallus	3.9e-125
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Gallus gallus	1.3e-124
BLAST match view associations BLAST with Rpd3 Rpd3 Rpd3	protein from Drosophila melanogaster	1.3e-124
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	protein from Mus musculus	1.5e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	gene from Rattus norvegicus	1.5e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Rattus norvegicus	1.5e-123
BLAST match view associations BLAST with hdaB hdaB hdaB type-1 histone deacetylase	gene from Dictyostelium discoideum	2.4e-123
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Gallus gallus	2.4e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Canis lupus familiaris	3.1e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	3.1e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Sus scrofa	3.1e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Drosophila melanogaster	2.2e-122
BLAST match view associations BLAST with hdac3 hdac3 hdac3 histone deacetylase 3	gene_product from Danio rerio	1.5e-121
BLAST match view associations BLAST with LOC100521667 LOC100521667 LOC100521667 Histone deacetylase	protein from Sus scrofa	6.6e-121
BLAST match view associations BLAST with RPD31 RPD31 RPD31	gene_product from Candida albicans	7.3e-121
BLAST match view associations BLAST with RPD31 RPD31 RPD31 Potential Sin3.Rpd3 histone deacetylase complex component Rpd3p	protein from Candida albicans SC5314	7.3e-121
BLAST match view associations BLAST with hda-1 hda-1 hda-1	gene from Caenorhabditis elegans	3.2e-119
BLAST match view associations BLAST with hda-1 hda-1 hda-1 Histone deacetylase 1	protein from Caenorhabditis elegans	3.2e-119
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	8.8e-118
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Homo sapiens	8.8e-118
BLAST match view associations BLAST with HDA6 HDA6 HDA6 AT5G63110	protein from Arabidopsis thaliana	2.3e-116
BLAST match view associations BLAST with hda-3 hda-3 hda-3	gene from Caenorhabditis elegans	6.0e-116
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Bos taurus	9.8e-116
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	gene from Saccharomyces cerevisiae	7.0e-113
BLAST match view associations BLAST with RPD3 RPD3 RPD3	gene_product from Candida albicans	2.3e-112
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	protein from Candida albicans SC5314	2.3e-112
BLAST match view associations BLAST with F1M4V8 F1M4V8 F1M4V8 Histone deacetylase	protein from Rattus norvegicus	5.0e-108
BLAST match view associations BLAST with HOS2 HOS2 HOS2	gene_product from Candida albicans	4.0e-104
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase	protein from Candida albicans SC5314	4.0e-104
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase and subunit of Set3 and Rpd3L complexes	gene from Saccharomyces cerevisiae	1.1e-101
BLAST match view associations BLAST with hda-2 hda-2 hda-2	gene from Caenorhabditis elegans	2.6e-98
BLAST match view associations BLAST with HDA7 HDA7 HDA7 AT5G35600	protein from Arabidopsis thaliana	2.1e-92
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.7e-80
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.6e-73
BLAST match view associations BLAST with hdac8 hdac8 hdac8 histone deacetylase 8	gene_product from Danio rerio	1.8e-72
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Gallus gallus	7.7e-71
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	9.9e-71
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	protein from Mus musculus	1.6e-70
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	gene from Rattus norvegicus	1.6e-70
BLAST match view associations BLAST with hda17 hda17 hda17 histone deacetylase 17	protein from Arabidopsis thaliana	4.3e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	7.0e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Bos taurus	8.9e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Bos taurus	8.0e-69
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	1.2e-67
BLAST match view associations BLAST with hda10 hda10 hda10 histone deacetylase 10	protein from Arabidopsis thaliana	9.3e-59
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	gene from Rattus norvegicus	1.2e-58
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.8e-58
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	6.9e-55
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.1e-54
BLAST match view associations BLAST with GSU1222 GSU1222 GSU1222 Histone deacetylase family protein	protein from Geobacter sulfurreducens PCA	7.8e-54
BLAST match view associations BLAST with GSU_1222 GSU_1222 GSU_1222 histone deacetylase/AcuC/AphA family protein	protein from Geobacter sulfurreducens PCA	7.8e-54
BLAST match view associations BLAST with HOS1 HOS1 HOS1	gene_product from Candida albicans	1.1e-46
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Likely histone deacetylase Hos1p	protein from Candida albicans SC5314	1.1e-46
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.9e-46
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Uncharacterized protein	protein from Sus scrofa	1.3e-45
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.1e-45
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Class I histone deacetylase (HDAC) family member	gene from Saccharomyces cerevisiae	8.4e-42
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	8.2e-37
BLAST match view associations BLAST with CHY_0174 CHY_0174 CHY_0174 acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	8.2e-37
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	8.2e-37
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Bacillus anthracis	2.7e-36
BLAST match view associations BLAST with BA_4918 BA_4918 BA_4918 acetoin utilization protein AcuC	protein from Bacillus anthracis str. Ames	2.7e-36
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.2e-36
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Uncharacterized protein	protein from Bos taurus	1.5e-33
BLAST match view associations BLAST with LOC100625846 LOC100625846 LOC100625846 Uncharacterized protein	protein from Sus scrofa	6.0e-32
BLAST match view associations BLAST with SPO_2177 SPO_2177 SPO_2177 acetoin utilization protein AcuC	protein from Ruegeria pomeroyi DSS-3	2.0e-31
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.9e-25
BLAST match view associations BLAST with HDA1 HDA1 HDA1	gene_product from Candida albicans	1.0e-24
BLAST match view associations BLAST with HDA1 HDA1 HDA1 Likely class II histone deacetylase subunit Hda1p	protein from Candida albicans SC5314	1.0e-24
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.4e-24
BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	1.1e-22
BLAST match view associations BLAST with HDA15 HDA15 HDA15 AT3G18520	protein from Arabidopsis thaliana	2.5e-22
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	gene from Rattus norvegicus	9.0e-22
BLAST match view associations BLAST with HDA08 HDA08 HDA08 AT1G08460	protein from Arabidopsis thaliana	6.0e-20
BLAST match view associations BLAST with aphA_2 aphA_2 aphA_2 Acetylpolyamine aminohydrolase	protein from Pseudomonas protegens Pf-5	1.2e-19
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017484
        (371 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ...  1654  2.5e-186  2
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s...  1180  7.2e-133  3
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe...  1180  9.2e-133  3
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s...  1180  9.2e-133  3
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s...  1174  8.2e-132  3
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"...  1173  8.2e-132  3
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe...  1173  8.2e-132  3
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe...  1173  8.2e-132  3
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s...  1182  2.0e-130  2
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla...  1174  1.3e-129  3
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla...  1159  4.3e-128  2
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe...  1160  5.5e-128  2
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s...  1160  5.5e-128  2
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s...  1160  5.5e-128  2
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe...  1160  5.5e-128  2
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s...  1160  7.0e-128  2
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp...  1156  1.5e-127  2
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac...  1140  3.8e-127  2
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ...  1145  1.9e-125  2
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe...  1160  2.4e-125  2
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s...  1147  3.9e-125  2
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe...  1142  1.3e-124  2
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph...  1133  1.3e-124  2
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp...  1132  1.5e-123  2
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species...  1132  1.5e-123  2
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s...  1132  1.5e-123  2
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac...  1119  2.4e-123  2
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s...  1116  2.4e-123  2
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe...  1129  3.1e-123  2
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s...  1129  3.1e-123  2
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe...  1129  3.1e-123  2
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe...  1127  2.2e-122  2
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl...  1114  1.5e-121  2
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla...  1170  6.6e-121  2
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic...  1077  7.3e-121  3
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist...  1077  7.3e-121  3
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe...  1105  1.1e-120  2
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd...  1099  3.2e-119  2
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s...  1099  3.2e-119  2
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe...  1160  8.8e-118  1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe...  1160  8.8e-118  1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric...  1077  2.6e-117  2
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl...  1043  1.8e-116  2
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ...  1066  2.3e-116  2
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd...  1044  6.0e-116  2
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe...  1044  9.8e-116  2
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie...  1028  7.0e-113  2
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica...  1030  2.3e-112  2
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec...  1030  2.3e-112  2
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp...   991  5.0e-108  2
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica...   972  4.0e-104  2
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec...   972  4.0e-104  2
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub...   959  1.1e-101  2
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c...   938  2.8e-101  2
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd...   908  2.6e-98   2
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric...   912  3.0e-95   2
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s...   858  2.1e-92   2
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s...   724  1.7e-80   2
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s...   738  4.6e-73   1
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety...   730  1.8e-72   2
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe...   717  7.7e-71   1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s...   716  9.9e-71   1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp...   714  1.6e-70   1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie...   714  1.6e-70   1
TAIR|locus:2076053 - symbol:hda17 "histone deacetylase 17...   710  4.3e-70   1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe...   708  7.0e-70   1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe...   707  8.9e-70   1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s...   698  8.0e-69   1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe...   687  1.2e-67   1
TAIR|locus:2098105 - symbol:hda10 "histone deacetylase 10...   603  9.3e-59   1
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie...   602  1.2e-58   1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s...   499  4.8e-58   2
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s...   293  6.9e-55   2
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s...   562  2.1e-54   1
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa...   534  7.8e-54   2
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/...   534  7.8e-54   2
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica...   489  1.1e-46   1
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas...   489  1.1e-46   1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s...   481  7.9e-46   1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"...   479  1.3e-45   1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s...   472  7.1e-45   1
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase...   443  8.4e-42   1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote...   374  8.2e-37   2
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ...   374  8.2e-37   2
UNIPROTKB|H3BM24 - symbol:HDAC2 "Histone deacetylase 2" s...   299  8.2e-37   2
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote...   366  2.7e-36   2
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr...   366  2.7e-36   2
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si...   387  7.2e-36   1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"...   365  1.5e-33   1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p...   350  6.0e-32   1
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ...   345  2.0e-31   1
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s...   287  2.9e-25   1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica...   277  1.0e-24   2
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d...   277  1.0e-24   2
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s...   201  1.4e-24   2
ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety...   275  1.1e-22   1
TAIR|locus:2095087 - symbol:HDA15 "AT3G18520" species:370...   271  2.5e-22   1
RGD|619976 - symbol:Hdac2 "histone deacetylase 2" species...   254  9.0e-22   1
TAIR|locus:2201826 - symbol:HDA08 "AT1G08460" species:370...   251  6.0e-20   1
UNIPROTKB|Q4K950 - symbol:aphA_2 "Acetylpolyamine aminohy...   244  1.2e-19   1

WARNING:  Descriptions of 124 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2098115 [details] [associations]
            symbol:HDA9 "histone deacetylase 9" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
            IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
            ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
            EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
            TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
            ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
        Length = 426

 Score = 1654 (587.3 bits), Expect = 2.5e-186, Sum P(2) = 2.5e-186
 Identities = 303/346 (87%), Positives = 328/346 (94%)

Query:    23 NHPMKPHRL--YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHA 80
             N  + P+ +  YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRLNN+LCDIAINWAGGLHHA
Sbjct:    79 NQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRLNNKLCDIAINWAGGLHHA 138

Query:    81 KKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 140
             KKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG
Sbjct:   139 KKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198

Query:   141 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 200
             D FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+TIISKVVE Y PGAIVLQC
Sbjct:   199 DKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRTIISKVVEIYQPGAIVLQC 258

Query:   201 GADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLD 260
             GADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLD
Sbjct:   259 GADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLD 318

Query:   261 TELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQM 320
             TELPNEIPEN+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQM
Sbjct:   319 TELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQM 378

Query:   321 QEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             QEVPPDFYIP+FDEDEQNPD R DQ ++DKQIQRDDE+++GDNDND
Sbjct:   379 QEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGDNDND 424

 Score = 175 (66.7 bits), Expect = 2.5e-186, Sum P(2) = 2.5e-186
 Identities = 31/31 (100%), Positives = 31/31 (100%)

Query:     1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             MRSKDKISYFYDGDVGSVYFGPNHPMKPHRL
Sbjct:     1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRL 31


>UNIPROTKB|Q32PJ8 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
            taurus" [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043922 "negative regulation by host of viral transcription"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0033613 "activating transcription factor binding"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
            "Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001047 "core
            promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
            GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
            GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
            IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
            ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
            Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
            HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
            NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
        Length = 482

 Score = 1180 (420.4 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 210/342 (61%), Positives = 270/342 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE
Sbjct:   268 GDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE 327

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   328 LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387

Query:   327 FYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 A-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428

 Score = 118 (46.6 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 40 (19.1 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKQE 471


>MGI|MGI:108086 [details] [associations]
            symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex"
            evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
            "chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
            evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
            [GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
            polymerase II repressing transcription factor binding"
            evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
            corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0003714 "transcription corepressor
            activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
            [GO:0008134 "transcription factor binding" evidence=ISO;TAS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO] [GO:0009913 "epidermal cell
            differentiation" evidence=IGI] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016575 "histone deacetylation"
            evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
            "NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
            "neuron differentiation" evidence=IGI] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0032403 "protein complex binding"
            evidence=ISO] [GO:0033558 "protein deacetylase activity"
            evidence=ISO] [GO:0033613 "activating transcription factor binding"
            evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
            binding" evidence=ISO] [GO:0043025 "neuronal cell body"
            evidence=IDA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IGI] [GO:0043234 "protein complex"
            evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
            by host of viral transcription" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
            regulation of oligodendrocyte differentiation" evidence=IGI]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=ISO] [GO:0060789 "hair follicle placode
            formation" evidence=IGI] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
            formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IGI] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
            GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
            GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
            GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
            GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
            OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
            RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
            ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
            MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
            PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
            KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
            ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
            Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
        Length = 482

 Score = 1180 (420.4 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 210/342 (61%), Positives = 270/342 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE
Sbjct:   268 GDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE 327

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   328 LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387

Query:   327 FYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 A-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428

 Score = 118 (46.6 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 39 (18.8 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>RGD|619975 [details] [associations]
            symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
            norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
            HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
            IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
            ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
            PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
            KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
            ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
            Uniprot:Q4QQW4
        Length = 482

 Score = 1180 (420.4 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 210/342 (61%), Positives = 270/342 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE
Sbjct:   268 GDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE 327

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   328 LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387

Query:   327 FYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 A-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 428

 Score = 118 (46.6 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 39 (18.8 bits), Expect = 9.2e-133, Sum P(3) = 9.2e-133
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>UNIPROTKB|Q13547 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
            evidence=IDA] [GO:0043922 "negative regulation by host of viral
            transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
            evidence=IDA] [GO:0033613 "activating transcription factor binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=TAS]
            [GO:0006367 "transcription initiation from RNA polymerase II
            promoter" evidence=TAS] [GO:0007179 "transforming growth factor
            beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
            signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0045786 "negative regulation of cell cycle" evidence=TAS]
            [GO:0048011 "neurotrophin TRK receptor signaling pathway"
            evidence=TAS] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
            evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IDA] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=IPI] [GO:0009913
            "epidermal cell differentiation" evidence=ISS] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=ISS]
            [GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISS] [GO:0060789 "hair follicle placode formation"
            evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
            evidence=ISS] [GO:0061198 "fungiform papilla formation"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=IC] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0010870 "positive regulation of receptor biosynthetic process"
            evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
            "histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
            GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
            Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
            Pathway_Interaction_DB:wnt_canonical_pathway
            Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
            GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
            GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
            Pathway_Interaction_DB:hedgehog_glipathway
            Pathway_Interaction_DB:smad2_3nuclearpathway
            Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
            Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
            GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
            GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
            GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
            GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
            EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
            RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
            ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
            MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
            PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
            Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
            GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
            MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
            PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
            SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
            DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
            Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
            GermOnline:ENSG00000116478 Uniprot:Q13547
        Length = 482

 Score = 1174 (418.3 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 209/342 (61%), Positives = 269/342 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE
Sbjct:   268 GDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE 327

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   328 LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPED 387

Query:   327 FYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               IPE   DEDE +PD+R+   + DK+I  ++EF + + + +
Sbjct:   388 A-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGE 428

 Score = 115 (45.5 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 39 (18.8 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>UNIPROTKB|E2R692 [details] [associations]
            symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            Ensembl:ENSCAFT00000016879 Uniprot:E2R692
        Length = 487

 Score = 1173 (418.0 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 210/343 (61%), Positives = 271/343 (79%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 265
             GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PN
Sbjct:   268 GDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPN 327

Query:   266 EIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP 325
             E+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P 
Sbjct:   328 ELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPE 387

Query:   326 DFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             D  IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 DA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 429

 Score = 115 (45.5 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 40 (19.1 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|F6X8F5 [details] [associations]
            symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
        Length = 483

 Score = 1173 (418.0 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 210/343 (61%), Positives = 271/343 (79%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 265
             GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PN
Sbjct:   268 GDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPN 327

Query:   266 EIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP 325
             E+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P 
Sbjct:   328 ELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPE 387

Query:   326 DFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             D  IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 DA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 429

 Score = 115 (45.5 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 40 (19.1 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|J9NUI0 [details] [associations]
            symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
            GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
            Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
        Length = 489

 Score = 1173 (418.0 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 210/343 (61%), Positives = 271/343 (79%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 265
             GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PN
Sbjct:   268 GDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPN 327

Query:   266 EIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP 325
             E+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P 
Sbjct:   328 ELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPE 387

Query:   326 DFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             D  IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   388 DA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 429

 Score = 115 (45.5 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRI 35

 Score = 40 (19.1 bits), Expect = 8.2e-132, Sum P(3) = 8.2e-132
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|P56517 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
            activity" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
            evidence=IEA] [GO:0001106 "RNA polymerase II transcription
            corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
            complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
            [GO:0033613 "activating transcription factor binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
            "negative regulation by host of viral transcription" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
            GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
            GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
            GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
            GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
            OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
            IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
            ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
            Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
            InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
            NextBio:20813492 Uniprot:P56517
        Length = 480

 Score = 1182 (421.1 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
 Identities = 208/341 (60%), Positives = 270/341 (79%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN Q  DIA+NWAGGLHHAKK EAS
Sbjct:    89 KQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEAS 148

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   149 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 207

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +ISKV+ET+ P A+VLQCG+DSL+
Sbjct:   208 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLS 267

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE
Sbjct:   268 GDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNE 327

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   328 LPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQPIPED 387

Query:   327 FYIPEF-DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
                 +  DE+E++P++R+     DK+I  D+EF + +++ +
Sbjct:   388 AVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSEDEGE 428

 Score = 118 (46.6 bits), Expect = 2.0e-130, Sum P(2) = 2.0e-130
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRI 35


>UNIPROTKB|I3LG31 [details] [associations]
            symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
        Length = 489

 Score = 1174 (418.3 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
 Identities = 211/344 (61%), Positives = 270/344 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAAR--RLNNQLCDIAINWAGGLHHAKKCE 84
             K  + +N+GEDCPVF+ LFEFCQ+ AGG++  A   +LN Q  DIA+NWAGGLHHAKK E
Sbjct:    94 KQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSE 153

Query:    85 ASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFF 144
             ASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +F
Sbjct:   154 ASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YF 212

Query:   145 PGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADS 204
             PGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DS
Sbjct:   213 PGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDS 272

Query:   205 LAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELP 264
             L+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+P
Sbjct:   273 LSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIP 332

Query:   265 NEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP 324
             NE+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P
Sbjct:   333 NELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIP 392

Query:   325 PDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              D  IPE   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   393 EDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 435

 Score = 93 (37.8 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
 Identities = 16/27 (59%), Positives = 20/27 (74%)

Query:     6 KISYFYD-GDVGSVYFGPNHPMKPHRL 31
             K+  FY  GDVG+ Y+G  HPMKPHR+
Sbjct:    14 KLPLFYSSGDVGNYYYGQGHPMKPHRI 40

 Score = 40 (19.1 bits), Expect = 1.3e-129, Sum P(3) = 1.3e-129
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   454 DEKEKDPEEKKEVTEEEKTKEEKQE 478


>ZFIN|ZDB-GENE-020419-32 [details] [associations]
            symbol:hdac1 "histone deacetylase 1" species:7955
            "Danio rerio" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            [GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
            evidence=IMP] [GO:0060028 "convergent extension involved in axis
            elongation" evidence=IMP] [GO:0001764 "neuron migration"
            evidence=IMP] [GO:0021754 "facial nucleus development"
            evidence=IMP] [GO:0031017 "exocrine pancreas development"
            evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
            [GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP]
            [GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
            neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
            differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
            tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
            identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
            GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
            GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
            GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
            GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
            IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
            ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
            KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
            ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
        Length = 480

 Score = 1159 (413.0 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
 Identities = 205/338 (60%), Positives = 264/338 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  DIAINWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+SKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMSKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT +NVARCWT ET + LD+ +PNE
Sbjct:   269 GDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTIKNVARCWTFETAVALDSTIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 364
                 +  ++E +PD+R+     DK+I  D+EF + +++
Sbjct:   389 AVQEDSGDEEDDPDKRISIRAHDKRIACDEEFSDSEDE 426

 Score = 119 (46.9 bits), Expect = 4.3e-128, Sum P(2) = 4.3e-128
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     8 TKKKVCYYYDGDVGNYYYGQGHPMKPHRI 36


>UNIPROTKB|F1NM39 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0009913
            "epidermal cell differentiation" evidence=IEA] [GO:0010870
            "positive regulation of receptor biosynthetic process"
            evidence=IEA] [GO:0010977 "negative regulation of neuron projection
            development" evidence=IEA] [GO:0016358 "dendrite development"
            evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
            "NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
            "ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0060789 "hair follicle placode formation" evidence=IEA]
            [GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
            [GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
            "negative regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
            GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
            GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
            GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
            GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
            IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
            EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
            Uniprot:F1NM39
        Length = 488

 Score = 1160 (413.4 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 117 (46.2 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 36


>UNIPROTKB|J3KPW7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
            EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
        Length = 582

 Score = 1160 (413.4 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:   184 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 243

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   244 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 302

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   303 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 362

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   363 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 422

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   423 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 482

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   483 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 523

 Score = 117 (46.2 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:   103 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 130


>UNIPROTKB|Q92769 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
            of protein deacetylation" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
            [GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
            complex" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
            [GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
            complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
            regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
            TRK receptor signaling pathway" evidence=TAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IC;IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0001103 "RNA polymerase II repressing transcription factor
            binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
            evidence=ISS] [GO:0010977 "negative regulation of neuron projection
            development" evidence=ISS] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
            morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
            formation" evidence=ISS] [GO:0061029 "eyelid development in
            camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
            formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
            evidence=IMP] [GO:0045347 "negative regulation of MHC class II
            biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
            of collagen biosynthetic process" evidence=IC] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IMP] [GO:0045862 "positive regulation of
            proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
            remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0004407 "histone deacetylase activity"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
            Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
            GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
            GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
            GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
            GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
            Pathway_Interaction_DB:hedgehog_glipathway
            Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
            GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
            GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
            GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
            DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
            EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
            UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
            SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
            STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
            DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
            UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
            HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
            InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
            ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
            NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
            Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
            Uniprot:Q92769
        Length = 488

 Score = 1160 (413.4 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 117 (46.2 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 36


>UNIPROTKB|F1RZK8 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
            papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045862 "positive regulation of proteolysis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0042733
            "embryonic digit morphogenesis" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
            evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
            [GO:0010977 "negative regulation of neuron projection development"
            evidence=IEA] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
            GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
            GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:CU041333
            Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
        Length = 550

 Score = 1160 (413.4 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:   152 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 211

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   212 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 270

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   271 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 330

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   331 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 390

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   391 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 450

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   451 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 491

 Score = 117 (46.2 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:    71 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 98


>UNIPROTKB|P56518 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:7668
            "Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
            complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
            UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
            PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
            KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
        Length = 576

 Score = 1160 (413.4 bits), Expect = 7.0e-128, Sum P(2) = 7.0e-128
 Identities = 209/342 (61%), Positives = 267/342 (78%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ L+EFCQ+ +GG++  A +LN Q  DIAINWAGGLHHAKK EAS
Sbjct:    88 KQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEAS 147

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   148 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 206

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK I+ KV+E Y P AI LQCGADSL+
Sbjct:   207 TGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIMCKVMEMYQPSAICLQCGADSLS 266

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT  NVARCWT ET   L  E+ NE
Sbjct:   267 GDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTIRNVARCWTYETSTALGVEIANE 326

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ EN+R I HAP VQMQ +P D
Sbjct:   327 LPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTRLYENMRMIPHAPGVQMQPIPED 386

Query:   327 FYIPEFD-EDE-QNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
                 + D EDE +NPD+R+    QDK+IQRDDEF + +++ +
Sbjct:   387 AIPDDSDAEDEAENPDKRISIMAQDKRIQRDDEFSDSEDEGE 428

 Score = 116 (45.9 bits), Expect = 7.0e-128, Sum P(2) = 7.0e-128
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             +K ++ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRI 34


>MGI|MGI:1097691 [details] [associations]
            symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
            evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
            chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
            deacetylation" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
            differentiation" evidence=IGI] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
            regulation of neuron projection development" evidence=ISO;IDA]
            [GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0016575 "histone
            deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
            evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
            evidence=ISO;IPI] [GO:0021766 "hippocampus development"
            evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
            [GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
            evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
            evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IGI] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IGI] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0051896 "regulation of protein kinase B signaling cascade"
            evidence=IMP] [GO:0055013 "cardiac muscle cell development"
            evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
            cell proliferation" evidence=IMP] [GO:0060297 "regulation of
            sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
            placode formation" evidence=IGI] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
            formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0090090 "negative regulation of canonical Wnt receptor
            signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
            deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
            GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
            GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
            GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
            EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
            GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
            GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
            EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
            ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
            MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
            PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
            InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
            Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
            GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
        Length = 488

 Score = 1156 (412.0 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
 Identities = 204/341 (59%), Positives = 264/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV   K FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 117 (46.2 bits), Expect = 1.5e-127, Sum P(2) = 1.5e-127
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 36


>DICTYBASE|DDB_G0268024 [details] [associations]
            symbol:hdaA "type-1 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
            deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
            GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
            RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
            EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
            OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
        Length = 495

 Score = 1140 (406.4 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
 Identities = 197/334 (58%), Positives = 265/334 (79%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+ EDCPVF+ ++ FCQI +GG+I  A ++N++  D+AINWAGGLHHAKK EASGFCY 
Sbjct:    89 FNVREDCPVFDGMYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYT 148

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL ILELLK+H RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+GD +FPGTGDVK
Sbjct:   149 NDIVLSILELLKHHERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGD-YFPGTGDVK 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG  +GK+Y++N PLKDGIDD S+  +F+ II  V++ Y PGA+V+QCGADSL GDRLG
Sbjct:   208 DIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNL++ GHA+C+ F+K FN+PL+V GGGGYT +NVARCWT ET IL+D+EL +E+P N+
Sbjct:   268 CFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYND 327

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
             Y++Y+ PE  L I   ++EN N+K YL  +K+Q+LENLR++ HAP+    ++PPD +   
Sbjct:   328 YLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYS 387

Query:   332 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 365
              DED+++PD R+ +  +DK++    E  + D ++
Sbjct:   388 DDEDDEDPDVRISEADRDKKVHHQGELSDSDEED 421

 Score = 129 (50.5 bits), Expect = 3.8e-127, Sum P(2) = 3.8e-127
 Identities = 23/49 (46%), Positives = 34/49 (69%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             S  K+SYFYD +VG+ Y+GPNHPMKPHR+  +  D  +   +++  QI+
Sbjct:     2 STRKVSYFYDNEVGNHYYGPNHPMKPHRM-RMTHDLVLNYGIYKKMQIF 49


>TAIR|locus:2120948 [details] [associations]
            symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
            "regulation of multicellular organismal development" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
            acid and ethylene-dependent systemic resistance" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
            [GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
            EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
            GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
            EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
            RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
            SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
            PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
            KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
            PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
            GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
        Length = 501

 Score = 1145 (408.1 bits), Expect = 1.9e-125, Sum P(2) = 1.9e-125
 Identities = 204/326 (62%), Positives = 257/326 (78%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ LCDIAINWAGGLHHAKKCEASGFCY+
Sbjct:   102 FNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYV 161

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL ILELLK H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHKFGD +FPGTG ++
Sbjct:   162 NDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGD-YFPGTGHIQ 220

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG   GK+Y++NVPL DGIDD S+  LFK I+ KV+E + PGA+VLQCGADSL+GDRLG
Sbjct:   221 DIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLG 280

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GHAECV+F++ FN+PLL+ GGGGYT  NVARCW  ETG+ L  E+ +++PE+E
Sbjct:   281 CFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHE 340

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
             Y +YF P+ +L +   ++EN NS+  L  I+  +L NL  +QHAPSV  QE PPD   PE
Sbjct:   341 YYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPE 400

Query:   332 FDEDEQNPDERMDQHTQDKQIQRDDE 357
              DED+++ D+R D    D  +  DD+
Sbjct:   401 VDEDQEDGDKRWDP---DSDMDVDDD 423

 Score = 108 (43.1 bits), Expect = 1.9e-125, Sum P(2) = 1.9e-125
 Identities = 17/28 (60%), Positives = 22/28 (78%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ YFYD +VG+ Y+G  HPMKPHR+
Sbjct:    16 KRKVCYFYDPEVGNYYYGQGHPMKPHRI 43


>UNIPROTKB|F1PR63 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
            Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
        Length = 488

 Score = 1160 (413.4 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 92 (37.4 bits), Expect = 2.4e-125, Sum P(2) = 2.4e-125
 Identities = 15/28 (53%), Positives = 19/28 (67%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K   F  GD+G+ Y+G  HPMKPHR+
Sbjct:     9 KQKKCVFSSGDIGNYYYGQGHPMKPHRI 36


>UNIPROTKB|P56520 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0008134 "transcription
            factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
            deacetylase activity" evidence=TAS] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
            UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
            PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
            InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
            ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
        Length = 428

 Score = 1147 (408.8 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
 Identities = 205/337 (60%), Positives = 259/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++YA+NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L+D  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLL-- 385

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE +P+ER  +    +  +  +EFY+GD+DND
Sbjct:   386 SYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 3.9e-125, Sum P(2) = 3.9e-125
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|F1NH59 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
            "circadian regulation of gene expression" evidence=IEA] [GO:0040014
            "regulation of multicellular organism growth" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0051225
            "spindle assembly" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
            EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
            EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
            EMBL:AADN02036018 Ensembl:ENSGALT00000004150
            Ensembl:ENSGALT00000034685 Uniprot:F1NH59
        Length = 428

 Score = 1142 (407.1 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
 Identities = 204/337 (60%), Positives = 258/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L+D  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDLL-- 385

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE +P+ER  +    +  +  +EFY+GD+DND
Sbjct:   386 SYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>FB|FBgn0015805 [details] [associations]
            symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
            "histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
            [GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEP;NAS]
            [GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
            silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
            evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
            [GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
            [GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
            "determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0031523 "Myb complex"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=IPI] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
            organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006099
            "tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
            electron transport chain" evidence=IDA] [GO:2001229 "negative
            regulation of response to gamma radiation" evidence=IMP]
            [GO:0005705 "polytene chromosome interband" evidence=IDA]
            [GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
            [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
            "Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
            evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
            EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
            GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
            GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
            GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
            GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
            EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
            ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
            MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
            EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
            CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
            PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
            GermOnline:CG7471 Uniprot:Q94517
        Length = 521

 Score = 1133 (403.9 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
 Identities = 200/341 (58%), Positives = 264/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN Q  +I INW GGLHHAKK EAS
Sbjct:    87 KQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNKQASEICINWGGGLHHAKKSEAS 146

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   147 GFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 205

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  IISKV+ET+ P A+VLQCGADSL 
Sbjct:   206 TGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAVVLQCGADSLT 265

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT  NV+RCWT ET + L  E+ NE
Sbjct:   266 GDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTIRNVSRCWTYETSVALAVEIANE 325

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQ+Q +P D
Sbjct:   326 LPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNRLFENLRMLPHAPGVQIQAIPED 385

Query:   327 FYIPEFD-EDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
                 E D ED+ + D+R+ Q  +DK+I  ++E+ + +++ +
Sbjct:   386 AINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSDSEDEGE 426

 Score = 112 (44.5 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
 Identities = 16/29 (55%), Positives = 23/29 (79%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             SK ++ Y+YD D+G+ Y+G  HPMKPHR+
Sbjct:     5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRI 33

 Score = 58 (25.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
 Identities = 21/89 (23%), Positives = 41/89 (46%)

Query:   283 RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQN-PD- 340
             +I N   ENL    +   +++Q +    +I    S    +V  D  +P+ D+D++  P+ 
Sbjct:   359 KIKNRLFENLRMLPHAPGVQIQAIPE-DAINDE-SDDEDKVDKDDRLPQSDKDKRIVPEN 416

Query:   341 ERMDQHTQDKQIQRDDEFYEGDNDNDHMD 369
             E  D   + +  +RD+  Y+G      +D
Sbjct:   417 EYSDSEDEGEGGRRDNRSYKGQRKRPRLD 445


>MGI|MGI:1343091 [details] [associations]
            symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
            microtubule" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
            cell cycle" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0032922 "circadian regulation of gene expression" evidence=IGI]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0040014 "regulation of multicellular organism
            growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
            JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
            MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
            GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
            GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
            Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
            GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
            Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
            EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
            PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
            DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
            PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
            InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
            CleanEx:MM_HDAC3 Genevestigator:O88895
            GermOnline:ENSMUSG00000024454 Uniprot:O88895
        Length = 424

 Score = 1132 (403.5 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 203/337 (60%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>RGD|619977 [details] [associations]
            symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
            evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
            regulation of gene expression" evidence=ISO] [GO:0033558 "protein
            deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
            multicellular organism growth" evidence=ISO] [GO:0042493 "response
            to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
            JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
            Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
            GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
            GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
            KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
            IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
            ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
            PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
            InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
            ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
        Length = 428

 Score = 1132 (403.5 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 203/337 (60%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|Q6P6W3 [details] [associations]
            symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
            norvegicus" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
            GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
            GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
            HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
            EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
            UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
            PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
            InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
            ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
        Length = 428

 Score = 1132 (403.5 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 203/337 (60%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 1.5e-123, Sum P(2) = 1.5e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>DICTYBASE|DDB_G0270338 [details] [associations]
            symbol:hdaB "type-1 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
            deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
            GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
            GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
            STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
            KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
        Length = 422

 Score = 1119 (399.0 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
 Identities = 204/328 (62%), Positives = 261/328 (79%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +++GEDCPVF  L+++C IY+GG+I+ A +LN+++ DIAINW+GGLHHA+K EAS
Sbjct:    92 KDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEAS 151

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EAFY TDRVMTVSFHKFG  FFPG
Sbjct:   152 GFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPG 211

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+ EIG + GK Y++NVPL DGIDD ++  +FK +I  V++ Y P  IVLQCGADSL 
Sbjct:   212 TGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLR 271

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
              DRLGCFNL+I GHAECVRFVK FN+P LV GGGGYT  NVARCWT ET + +DTE+ NE
Sbjct:   272 FDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNE 331

Query:   267 IPENEYIKYFAPECSLRIPN--G---HIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQ 321
             +P N+YI++++P+  L IP+  G     EN N+KSYL ++++++LENLR +Q APSVQ+Q
Sbjct:   332 LPYNDYIQFYSPDFQL-IPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQ 390

Query:   322 EVPPDFYIPEFDEDE---QNPDERMDQH 346
             +VPPD    +FD DE   +N D+R  +H
Sbjct:   391 DVPPDIMPIDFDRDEDSKENMDKRKKKH 418

 Score = 114 (45.2 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             SK ++ YF+D DVG+ ++GP HPMKPHRL
Sbjct:    11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRL 39


>UNIPROTKB|P56519 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
            GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
            IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
            ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
            GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
            BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
        Length = 488

 Score = 1116 (397.9 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
 Identities = 201/341 (58%), Positives = 259/341 (75%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVS     + F PG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSEVSMVNNF-PG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 117 (46.2 bits), Expect = 2.4e-123, Sum P(2) = 2.4e-123
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 36


>UNIPROTKB|E2R792 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
            ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
            KEGG:cfa:478040 Uniprot:E2R792
        Length = 428

 Score = 1129 (402.5 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 202/337 (59%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|O15379 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
            of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0040014 "regulation of multicellular
            organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0046329 "negative regulation of
            JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0017053 "transcriptional repressor complex" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
            activity" evidence=IDA] [GO:0005876 "spindle microtubule"
            evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0003714 "transcription corepressor activity"
            evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
            signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
            metabolic process" evidence=TAS] [GO:0044281 "small molecule
            metabolic process" evidence=TAS] [GO:0045786 "negative regulation
            of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
            signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
            binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=IMP] Reactome:REACT_111217
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
            GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
            GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
            GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0008134
            Pathway_Interaction_DB:retinoic_acid_pathway
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
            GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
            Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
            DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
            EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
            EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
            IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
            UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
            SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
            STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
            DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
            UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
            MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
            OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
            ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
            PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
            Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
        Length = 428

 Score = 1129 (402.5 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 202/337 (59%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|F2Z4Z6 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
            of multicellular organism growth" evidence=IEA] [GO:0032922
            "circadian regulation of gene expression" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
            cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
            UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
            Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
            Uniprot:F2Z4Z6
        Length = 428

 Score = 1129 (402.5 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 202/337 (59%), Positives = 257/337 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +E
Sbjct:   268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT- 386

Query:   331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   387 -YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>FB|FBgn0025825 [details] [associations]
            symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
            melanogaster" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0006342 "chromatin silencing"
            evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
            GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
            GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
            KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
            UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
            EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
            UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
            OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
        Length = 438

 Score = 1127 (401.8 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
 Identities = 202/342 (59%), Positives = 258/342 (75%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +++GEDCPVF+ LF+FC +Y G +++ A++LN+   DI INW+GGLHHAKK EASGFCY+
Sbjct:    93 FSVGEDCPVFDGLFDFCAMYTGASLEGAQKLNHNHSDICINWSGGLHHAKKFEASGFCYV 152

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+GILELLKYH RVLYIDIDVHHGDGV+EAFY TDRVMT SFHK+G+ FFPGTGD+ 
Sbjct:   153 NDIVIGILELLKYHPRVLYIDIDVHHGDGVQEAFYLTDRVMTASFHKYGNYFFPGTGDMY 212

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             EIG   G++Y++NVPLK+GIDD S+ ++FK IIS +++ Y P AIVLQCGADSLAGDRLG
Sbjct:   213 EIGAESGRYYSVNVPLKEGIDDQSYFQVFKPIISAIMDFYRPTAIVLQCGADSLAGDRLG 272

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CF+LS  GH ECV+FVK+ N+P LV GGGGYT  NVARCWT ET +L+D ++ N++P  E
Sbjct:   273 CFSLSTKGHGECVKFVKELNVPTLVVGGGGYTLRNVARCWTHETSLLVDQDIENDLPATE 332

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y  +FAP+ +L    N   +N NSK YL  I   V ENL+  QH+PSVQM + PPD  + 
Sbjct:   333 YYDFFAPDFTLHPEINSRQDNANSKQYLELIVKHVYENLKMCQHSPSVQMVQTPPDVDLE 392

Query:   331 EFD---EDEQNPDERMDQHTQDKQIQRDDEFYEGDNDNDHMD 369
             E     E+  +PD R+    +DK +   +EFY+GD D D  D
Sbjct:   393 ELRSNREEASDPDVRISVADEDKLVDAKNEFYDGDQDQDKPD 434

 Score = 97 (39.2 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
 Identities = 15/26 (57%), Positives = 21/26 (80%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++SYFY+ DVG+ ++G  HPMKP RL
Sbjct:     5 RVSYFYNADVGNFHYGAGHPMKPQRL 30


>ZFIN|ZDB-GENE-040426-847 [details] [associations]
            symbol:hdac3 "histone deacetylase 3" species:7955
            "Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
            development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
            GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
            HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
            EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
            ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
            KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
            ArrayExpress:Q803C3 Uniprot:Q803C3
        Length = 428

 Score = 1114 (397.2 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
 Identities = 201/336 (59%), Positives = 256/336 (76%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G DCPVF  LFEFC  Y G ++  A +LN+++CDIAINWAGGLHHAKK EASGFCY+
Sbjct:    88 FNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYV 147

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ 
Sbjct:   148 NDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +VV+ Y P  IVLQCGADSL  DRLG
Sbjct:   208 EVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLG 267

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLSI GH ECV FVK F +PLLV GGGGYT  NVARCWT ET +L++  + +E+P +E
Sbjct:   268 CFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSE 327

Query:   272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             Y +YFAP+ +L    +  IEN NS+ YL  I+  V ENL+ + HAPSVQ+++VP D    
Sbjct:   328 YFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSDLLSY 387

Query:   331 EFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             E   DE +P+ER  +    +  +  +EFY+GD+D+D
Sbjct:   388 E-RPDEADPEERGSEENFSRP-EAANEFYDGDHDHD 421

 Score = 102 (41.0 bits), Expect = 1.5e-121, Sum P(2) = 1.5e-121
 Identities = 16/27 (59%), Positives = 22/27 (81%)

Query:     5 DKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ +YFYD DVG+ ++G  HPMKPHRL
Sbjct:     3 NRTAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|F1SV89 [details] [associations]
            symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
        Length = 392

 Score = 1170 (416.9 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
 Identities = 210/338 (62%), Positives = 267/338 (78%)

Query:    33 NLGEDCPVFENLFEFCQIYAGGTIDAAR--RLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             N+GEDCPVF+ LFEFCQ+ AGG++  A   +LN Q  DIA+NWAGGLHHAKK EASGFCY
Sbjct:     3 NVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCY 62

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             +ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+
Sbjct:    63 VNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDL 121

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
             ++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRL
Sbjct:   122 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 181

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 270
             GCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+P N
Sbjct:   182 GCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYN 241

Query:   271 EYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
             +Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D  IP
Sbjct:   242 DYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IP 300

Query:   331 EF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             E   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   301 EESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 338

 Score = 40 (19.1 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDE 357
             DE E++P+E+ +   ++K  +   E
Sbjct:   357 DEKEKDPEEKKEVTEEEKTKEEKQE 381


>CGD|CAL0005608 [details] [associations]
            symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
            "phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
            evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
            "histone deacetylase activity" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0003714
            "transcription corepressor activity" evidence=IEA] [GO:0030174
            "regulation of DNA-dependent DNA replication initiation"
            evidence=IEA] [GO:0000115 "regulation of transcription involved in
            S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
            silencing at centromere" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
            transcription involved in G1/S phase of mitotic cell cycle"
            evidence=IEA] [GO:0031939 "negative regulation of chromatin
            silencing at telomere" evidence=IEA] [GO:0034503 "protein
            localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
            "positive regulation of transcription from RNA polymerase II
            promoter in response to heat stress" evidence=IEA] [GO:0061186
            "negative regulation of chromatin silencing at silent mating-type
            cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
            condensation" evidence=IEA] [GO:0034401 "regulation of
            transcription by chromatin organization" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
            regulation of reciprocal meiotic recombination" evidence=IEA]
            [GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
            "negative regulation of chromatin silencing at rDNA" evidence=IEA]
            [GO:0000117 "regulation of transcription involved in G2/M-phase of
            mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
            of transcription from RNA polymerase I promoter" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
            "negative regulation of transcription during meiosis" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
            Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
            RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
            STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
            KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
        Length = 577

 Score = 1077 (384.2 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 193/338 (57%), Positives = 261/338 (77%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF+ LFE+C I  GG+++ A RLN   CDIAIN+AGGLHHAKK EASGFCY+
Sbjct:   103 FNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRGKCDIAINYAGGLHHAKKSEASGFCYL 162

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG+++
Sbjct:   163 NDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELR 221

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG  +GK++++NVPL+DGIDD ++  +F+ +ISK++E Y P AIVLQCG DSL+GDRLG
Sbjct:   222 DIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLG 281

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLS++GHA C+ +VK FN+P++V GGGGYT  NVAR W  E+G+L + +LP+E+P NE
Sbjct:   282 CFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYNE 341

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-IP 330
             Y +Y+ P+  L + + ++ N NS  +L  I   ++ NL + +HAPSVQM EVP D   + 
Sbjct:   342 YYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNIIANLENTKHAPSVQMNEVPNDPEDLG 401

Query:   331 EFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGDNDND 366
             + +ED     +     + ++D QIQ D+EFYE D++ D
Sbjct:   402 DVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-DDEKD 438

 Score = 108 (43.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 26/79 (32%), Positives = 38/79 (48%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL---------YNLGEDCPVFE----NLFEFCQI 50
             K +I+YFYD D+G+  +G  HPMKPHR+         Y L +   ++        E CQ 
Sbjct:    17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76

Query:    51 YAGGTIDAARRLNNQLCDI 69
             +    ID   R+N    D+
Sbjct:    77 HTDEYIDFISRVNPDNLDL 95

 Score = 39 (18.8 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
             D+D    D+  +   + K   +D+    GDN
Sbjct:   451 DQDSMQVDKSEEPVVEQKDKPQDENNVTGDN 481


>UNIPROTKB|Q5ADP0 [details] [associations]
            symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
            complex component Rpd3p" species:237561 "Candida albicans SC5314"
            [GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
            INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
            RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
            STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
            KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
        Length = 577

 Score = 1077 (384.2 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 193/338 (57%), Positives = 261/338 (77%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF+ LFE+C I  GG+++ A RLN   CDIAIN+AGGLHHAKK EASGFCY+
Sbjct:   103 FNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRGKCDIAINYAGGLHHAKKSEASGFCYL 162

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG+++
Sbjct:   163 NDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELR 221

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG  +GK++++NVPL+DGIDD ++  +F+ +ISK++E Y P AIVLQCG DSL+GDRLG
Sbjct:   222 DIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVISKIIEWYQPSAIVLQCGGDSLSGDRLG 281

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLS++GHA C+ +VK FN+P++V GGGGYT  NVAR W  E+G+L + +LP+E+P NE
Sbjct:   282 CFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMRNVARTWAYESGLLNNVKLPDELPYNE 341

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-IP 330
             Y +Y+ P+  L + + ++ N NS  +L  I   ++ NL + +HAPSVQM EVP D   + 
Sbjct:   342 YYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNIIANLENTKHAPSVQMNEVPNDPEDLG 401

Query:   331 EFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGDNDND 366
             + +ED     +     + ++D QIQ D+EFYE D++ D
Sbjct:   402 DVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-DDEKD 438

 Score = 108 (43.1 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 26/79 (32%), Positives = 38/79 (48%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL---------YNLGEDCPVFE----NLFEFCQI 50
             K +I+YFYD D+G+  +G  HPMKPHR+         Y L +   ++        E CQ 
Sbjct:    17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76

Query:    51 YAGGTIDAARRLNNQLCDI 69
             +    ID   R+N    D+
Sbjct:    77 HTDEYIDFISRVNPDNLDL 95

 Score = 39 (18.8 bits), Expect = 7.3e-121, Sum P(3) = 7.3e-121
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
             D+D    D+  +   + K   +D+    GDN
Sbjct:   451 DQDSMQVDKSEEPVVEQKDKPQDENNVTGDN 481


>UNIPROTKB|D4AEB0 [details] [associations]
            symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
            ArrayExpress:D4AEB0 Uniprot:D4AEB0
        Length = 428

 Score = 1105 (394.0 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
 Identities = 200/334 (59%), Positives = 252/334 (75%)

Query:    35 GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDL 94
             G + PVF  LFEFC  Y G ++  A +LNN++CDIAINWAGGLHHAKK EASGFCY+ND+
Sbjct:    91 GREFPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYVNDI 150

Query:    95 VLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 154
             V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+ E+G
Sbjct:   151 VIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMYEVG 210

Query:   155 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
                G++Y +NVPL+DGIDD S+  LF+ +IS+VV+ Y P  IVLQCGADSL  DRLGCFN
Sbjct:   211 AESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLGCFN 270

Query:   215 LSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIK 274
             LSI GH ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P +EY +
Sbjct:   271 LSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSEYFE 330

Query:   275 YFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFD 333
             YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D     +D
Sbjct:   331 YFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLT--YD 388

Query:   334 E-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   389 RTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421

 Score = 103 (41.3 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>WB|WBGene00001834 [details] [associations]
            symbol:hda-1 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
            "histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
            development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006974 "response to DNA damage
            stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
            development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
            differentiation" evidence=IGI] [GO:0046580 "negative regulation of
            Ras protein signal transduction" evidence=IGI] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
            signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
            complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
            "transcription corepressor activity" evidence=IPI] [GO:0045138
            "tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
            GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
            GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
            GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
            GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
            ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
            MINT:MINT-226391 STRING:O17695 PaxDb:O17695
            EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
            KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
            GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
            NextBio:907546 Uniprot:O17695
        Length = 461

 Score = 1099 (391.9 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
 Identities = 198/339 (58%), Positives = 253/339 (74%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q  DIAINW GGLHHAKK EASGFCY 
Sbjct:    98 FNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYT 157

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTGD+K
Sbjct:   158 NDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLK 216

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG  +GK Y++NVPL+DGI D S+  +FK I++KV+E + P A+VLQCGADSL GDRLG
Sbjct:   217 DIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLG 276

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FNL++ GH EC RF + +N+PL++ GGGGYT  NVARCWT ET I +D E+PNE+P N+
Sbjct:   277 PFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYND 336

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
             Y +YF P   L I + +  N NS   L+ ++  V+ NL  +   PSVQM+ +P D     
Sbjct:   337 YFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSAL 396

Query:   332 FDE----DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              D+    D+ NPD+R+     D  IQ D +FY+G+ + D
Sbjct:   397 NDDSLIADQANPDKRLPPQITDGMIQDDGDFYDGEREGD 435

 Score = 95 (38.5 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
 Identities = 13/28 (46%), Positives = 22/28 (78%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K +++Y+YD ++G+ Y+G  H MKPHR+
Sbjct:    12 KRRVAYYYDSNIGNYYYGQGHVMKPHRI 39


>UNIPROTKB|O17695 [details] [associations]
            symbol:hda-1 "Histone deacetylase 1" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
            GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
            GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
            GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
            GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
            GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
            RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
            DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
            PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
            GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
            WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
            OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
        Length = 461

 Score = 1099 (391.9 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
 Identities = 198/339 (58%), Positives = 253/339 (74%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q  DIAINW GGLHHAKK EASGFCY 
Sbjct:    98 FNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYT 157

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTGD+K
Sbjct:   158 NDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLK 216

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG  +GK Y++NVPL+DGI D S+  +FK I++KV+E + P A+VLQCGADSL GDRLG
Sbjct:   217 DIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLG 276

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FNL++ GH EC RF + +N+PL++ GGGGYT  NVARCWT ET I +D E+PNE+P N+
Sbjct:   277 PFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYND 336

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
             Y +YF P   L I + +  N NS   L+ ++  V+ NL  +   PSVQM+ +P D     
Sbjct:   337 YFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSAL 396

Query:   332 FDE----DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
              D+    D+ NPD+R+     D  IQ D +FY+G+ + D
Sbjct:   397 NDDSLIADQANPDKRLPPQITDGMIQDDGDFYDGEREGD 435

 Score = 95 (38.5 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
 Identities = 13/28 (46%), Positives = 22/28 (78%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K +++Y+YD ++G+ Y+G  H MKPHR+
Sbjct:    12 KRRVAYYYDSNIGNYYYGQGHVMKPHRI 39


>UNIPROTKB|J9P9H5 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
            RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
            KEGG:cfa:475035 Uniprot:J9P9H5
        Length = 458

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    60 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 119

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   120 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 178

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   179 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 238

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   239 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 298

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   299 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 358

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   359 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 399


>UNIPROTKB|B3KRS5 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0009913 "epidermal cell differentiation"
            evidence=IEA] [GO:0010977 "negative regulation of neuron projection
            development" evidence=IEA] [GO:0016358 "dendrite development"
            evidence=IEA] [GO:0017053 "transcriptional repressor complex"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
            GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
            EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
            EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
            Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
        Length = 458

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 205/341 (60%), Positives = 265/341 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    60 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 119

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   120 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 178

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+
Sbjct:   179 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLS 238

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   239 GDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 298

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   299 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 358

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   359 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 399


>ASPGD|ASPL0000073195 [details] [associations]
            symbol:rpdA species:162425 "Emericella nidulans"
            [GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
            "histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
            deacetylation" evidence=IMP] [GO:0030174 "regulation of
            DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
            "regulation of transcription involved in S phase of mitotic cell
            cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0000083 "regulation of transcription involved in G1/S phase of
            mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
            of chromatin silencing at telomere" evidence=IEA] [GO:0034503
            "protein localization to nucleolar rDNA repeats" evidence=IEA]
            [GO:0061408 "positive regulation of transcription from RNA
            polymerase II promoter in response to heat stress" evidence=IEA]
            [GO:0061186 "negative regulation of chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
            condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
            sporulation resulting in formation of a cellular spore"
            evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
            organization" evidence=IEA] [GO:0045128 "negative regulation of
            reciprocal meiotic recombination" evidence=IEA] [GO:0001302
            "replicative cell aging" evidence=IEA] [GO:0061188 "negative
            regulation of chromatin silencing at rDNA" evidence=IEA]
            [GO:0000117 "regulation of transcription involved in G2/M-phase of
            mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
            of transcription from RNA polymerase I promoter" evidence=IEA]
            [GO:0051038 "negative regulation of transcription during meiosis"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
            "Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
            "Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
            EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
            EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
            OMA:APDYELD Uniprot:G5EB64
        Length = 687

 Score = 1077 (384.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
 Identities = 196/352 (55%), Positives = 262/352 (74%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K    YN+G+DCPVF+ LFEFC I AGG+++ A RLN   CDIA+NWAGGLHHAKK EAS
Sbjct:   106 KEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRNKCDIAVNWAGGLHHAKKSEAS 165

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   166 GFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 224

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TG++++IG  +GK+YA+N PL+DGIDD S+  +F+ +I  V+E Y P A+VLQCG DSL+
Sbjct:   225 TGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPVIKSVMEWYRPEAVVLQCGGDSLS 284

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT  NVAR W  ETGIL+   L +E
Sbjct:   285 GDRLGCFNLSMRGHANCVKYVKSFNLPTLIVGGGGYTMRNVARTWAFETGILVGDNLGSE 344

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP-- 324
             +P N+Y +YFAP+  L +   +++N N++ YL  I+ QV+ENL+    APSVQM +VP  
Sbjct:   345 LPYNDYYEYFAPDYELDVRPSNMDNANTREYLDKIRTQVVENLKRTAFAPSVQMTDVPRE 404

Query:   325 P---------DFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDNDH 367
             P         +  + + DEDE N D+R  +   D+ +++  E  + ++++++
Sbjct:   405 PLVDGMDDEAEAALDDLDEDE-NKDKRFTKRRFDQYVEKPGELSDSEDEDEN 455

 Score = 99 (39.9 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query:     2 RSKDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             RSK +++YFYD DVG+  +   HPMKPHR+  +     +  +L++  +IY
Sbjct:    24 RSK-RVAYFYDSDVGNYAYVSGHPMKPHRI-RMTHSLVMNYSLYKKMEIY 71


>POMBASE|SPBC36.05c [details] [associations]
            symbol:clr6 "histone deacetylase (class I) Clr6"
            species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
            sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
            "chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
            silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
            "chromatin silencing at centromere" evidence=IMP] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=NAS]
            [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
            complex" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
            GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
            GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
            GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
            PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
            DIP:DIP-29339N IntAct:O59702 STRING:O59702
            EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
            HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
            NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
        Length = 405

 Score = 1043 (372.2 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
 Identities = 187/320 (58%), Positives = 243/320 (75%)

Query:    27 KPHRL-YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 85
             +PH+L +N+G+DCPVF+ L+EFC I AGG+I AA+ LN+   +IAINWAGGLHHAKK EA
Sbjct:    85 QPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSGNAEIAINWAGGLHHAKKREA 144

Query:    86 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 145
             SGFCY+ND+ L  LELLKYH RVLYIDIDVHHGDGVEE FY TDRVMT SFHKFG+ +FP
Sbjct:   145 SGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFFYTTDRVMTCSFHKFGE-YFP 203

Query:   146 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 205
             GTG +K+ G   GK YA+NVPL+DGIDD S+  +FK +IS +++ + P A++LQCG DSL
Sbjct:   204 GTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAVILQCGTDSL 263

Query:   206 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 265
             AGDRLGCFNLS+ GH+ CV FVK FNLP++  GGGGYT  NVAR WT ETG+L   EL  
Sbjct:   264 AGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVRNVARVWTYETGLLAGEELDE 323

Query:   266 EIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP 325
              +P N+Y++Y+ P+  L + + ++EN N++ YL +I  +++ENLR++  APSVQM + P 
Sbjct:   324 NLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEIIENLRNLSFAPSVQMHKTPG 383

Query:   326 DFYIPEFDEDEQNPDERMDQ 345
             DF     ++     +E MD+
Sbjct:   384 DFTFENAEKQNIAKEEIMDE 403

 Score = 125 (49.1 bits), Expect = 1.8e-116, Sum P(2) = 1.8e-116
 Identities = 23/43 (53%), Positives = 31/43 (72%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFE 46
             K K+SYFYD DVG+ ++GP HPMKPHR+  +  +  V  NL+E
Sbjct:     5 KKKVSYFYDEDVGNYHYGPQHPMKPHRV-RMVHNLVVNYNLYE 46


>TAIR|locus:2162017 [details] [associations]
            symbol:HDA6 "histone deacetylase 6" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016441
            "posttranscriptional gene silencing" evidence=IMP] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
            stress" evidence=IMP] [GO:0009737 "response to abscisic acid
            stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
            evidence=IMP] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IMP] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
            deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
            evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
            GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
            GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
            EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
            EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
            ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
            PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
            KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
            PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
            GO:GO:0016441 Uniprot:Q9FML2
        Length = 471

 Score = 1066 (380.3 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
 Identities = 200/338 (59%), Positives = 249/338 (73%)

Query:    30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
             R +N+GEDCPVF+ LF+FC+  AGG+I AA +LN Q  DIAINW GGLHHAKK EASGFC
Sbjct:   104 RRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFC 163

Query:    90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
             Y+ND+VLGILELLK   RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPGTG 
Sbjct:   164 YVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGH 222

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
             ++++G  +GK+YA+NVPL DG+DD SF  LF+ +I KV+E Y P A+VLQCGADSL+GDR
Sbjct:   223 IRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDR 282

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
             LGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT  NVARCW  ET + +  E  N++P 
Sbjct:   283 LGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPY 342

Query:   270 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
             NEY +YF P+ +L +    +ENLN+   +  I+  +LE L  + HAPSVQ Q  PP   +
Sbjct:   343 NEYFEYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRV 402

Query:   330 PEFDEDEQNPDERMDQHTQDK-QIQRDDEFYEGDNDND 366
                DE E       D  T+ K +I      YE D+D+D
Sbjct:   403 --LDEPED------DMETRPKPRIWSGTATYESDSDDD 432

 Score = 101 (40.6 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
 Identities = 15/28 (53%), Positives = 21/28 (75%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K ++SYFY+  +G  Y+G  HPMKPHR+
Sbjct:    18 KRRVSYFYEPTIGDYYYGQGHPMKPHRI 45


>WB|WBGene00001836 [details] [associations]
            symbol:hda-3 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0042262 "DNA protection"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=ISS] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
            GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
            RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
            IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
            GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
            NextBio:878171 Uniprot:G5ECH0
        Length = 465

 Score = 1044 (372.6 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
 Identities = 190/337 (56%), Positives = 250/337 (74%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +++GEDCPVF+ ++EFCQ+  GG++ AA RLN Q  +IAINW GGLHHAKK EASGFCY 
Sbjct:    93 FSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNRQESEIAINWMGGLHHAKKSEASGFCYS 152

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL ILELLK+H RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHK G+ +FPGTGD+K
Sbjct:   153 NDIVLAILELLKHHKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKHGE-YFPGTGDLK 211

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G   GK+YA+NVPL+DG+DD ++ R+F+TI+ +V+  + P A+VLQCGADSLAGDRLG
Sbjct:   212 DVGAGSGKYYALNVPLRDGVDDVTYERIFRTIMGEVMARFQPEAVVLQCGADSLAGDRLG 271

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FNL+  GH +CV ++K FN+PLL+ GGGGYT  NV+RCW  ET I L+ E+ +++P ++
Sbjct:   272 VFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTIRNVSRCWLYETAIALNQEVSDDLPLHD 331

Query:   272 YIKYFAPECSLRI-PNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP--DFY 328
             Y  YF P+  L I P   + N N+  ++    + +LENL+ + H PSVQMQ +    D  
Sbjct:   332 YFDYFIPDYKLHIKPLAALSNFNTPEFIDQTIVALLENLKQLPHVPSVQMQSISTSCDSI 391

Query:   329 IPEFDE----DEQNPDERMDQHTQDKQIQRDDEFYEG 361
             +  FDE    D QN D R+ Q  +D Q++   EFY+G
Sbjct:   392 VKTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAEFYDG 428

 Score = 119 (46.9 bits), Expect = 6.0e-116, Sum P(2) = 6.0e-116
 Identities = 18/29 (62%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             SK ++SY+YDGD G+ Y+G  HPMKPHR+
Sbjct:     6 SKSRVSYYYDGDFGNFYYGQGHPMKPHRV 34


>UNIPROTKB|F1MFZ7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
            taurus" [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
            papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045862 "positive regulation of proteolysis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0042733
            "embryonic digit morphogenesis" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
            evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
            [GO:0010977 "negative regulation of neuron projection development"
            evidence=IEA] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
            GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
            GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
            EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
            Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
        Length = 488

 Score = 1044 (372.6 bits), Expect = 9.8e-116, Sum P(2) = 9.8e-116
 Identities = 187/341 (54%), Positives = 249/341 (73%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    90 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 149

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPG
Sbjct:   150 GFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPG 208

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TGD+++IG  +GK+YA+N P++DGIDD S+ ++FK +I+K+ E   P  + L+      A
Sbjct:   209 TGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVITKIGEITFPTKVCLEIQPVHSA 268

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNE 266
             GD+   F   + GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE
Sbjct:   269 GDQFWVFVYCVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNE 328

Query:   267 IPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
             +P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D
Sbjct:   329 LPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPED 388

Query:   327 -FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
               +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   389 AVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 429

 Score = 117 (46.2 bits), Expect = 9.8e-116, Sum P(2) = 9.8e-116
 Identities = 17/28 (60%), Positives = 23/28 (82%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRI 36


>SGD|S000005274 [details] [associations]
            symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
            cerevisiae" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
            activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
            transcription from RNA polymerase II promoter in response to heat
            stress" evidence=IMP] [GO:0003713 "transcription coactivator
            activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IMP]
            [GO:0030174 "regulation of DNA-dependent DNA replication
            initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
            transcription during meiosis" evidence=IMP] [GO:0034503 "protein
            localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
            "Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
            complex" evidence=IDA] [GO:0016239 "positive regulation of
            macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IMP] [GO:0000115 "regulation of
            transcription involved in S phase of mitotic cell cycle"
            evidence=IMP] [GO:0045128 "negative regulation of reciprocal
            meiotic recombination" evidence=IMP] [GO:0016479 "negative
            regulation of transcription from RNA polymerase I promoter"
            evidence=IMP] [GO:0031939 "negative regulation of chromatin
            silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
            transcription involved in G1/S phase of mitotic cell cycle"
            evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
            transcription involved in G2/M-phase of mitotic cell cycle"
            evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
            organization" evidence=IMP] [GO:0001302 "replicative cell aging"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
            "Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
            chromatin silencing at silent mating-type cassette" evidence=IMP]
            [GO:0061188 "negative regulation of chromatin silencing at rDNA"
            evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
            [GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
            complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
            EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
            GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
            GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
            GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
            GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
            GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
            GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
            GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
            RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
            DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
            PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
            KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
            Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
        Length = 433

 Score = 1028 (366.9 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
 Identities = 180/331 (54%), Positives = 246/331 (74%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF+ L+E+C I  GG+++ A RLN   CD+A+N+AGGLHHAKK EASGFCY+
Sbjct:   104 FNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAVNYAGGLHHAKKSEASGFCYL 163

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG+++
Sbjct:   164 NDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELR 222

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             +IG   GK YA+NVPL+DGIDD ++  +F+ +I K++E Y P A+VLQCG DSL+GDRLG
Sbjct:   223 DIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLG 282

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
             CFNLS++GHA CV +VK F +P++V GGGGYT  NVAR W  ETG+L +  L  ++P NE
Sbjct:   283 CFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYNE 342

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-IP 330
             Y +Y+ P+  L +   ++ N+N+  YL  +   +  NL + ++APSVQ+   P D   + 
Sbjct:   343 YYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTPRDAEDLG 402

Query:   331 EFDED--EQNPDERMDQHTQDKQIQRDDEFY 359
             + +ED  E    +   Q+ +D  ++ D+EFY
Sbjct:   403 DVEEDSAEAKDTKGGSQYARDLHVEHDNEFY 433

 Score = 106 (42.4 bits), Expect = 7.0e-113, Sum P(2) = 7.0e-113
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             K +++YFYD DVG+  +G  HPMKPHR+  +     +   L++  +IY
Sbjct:    18 KRRVAYFYDADVGNYAYGAGHPMKPHRI-RMAHSLIMNYGLYKKMEIY 64


>CGD|CAL0005111 [details] [associations]
            symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
            EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
            GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
            ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
            GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
            Uniprot:Q5A209
        Length = 480

 Score = 1030 (367.6 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
 Identities = 194/339 (57%), Positives = 248/339 (73%)

Query:    31 LYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             ++N+G+DCPVF+ L EFC+I  GG+++ A RLN    DIAIN+AGGLHHAKK EASGFCY
Sbjct:   101 IFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRGQADIAINYAGGLHHAKKSEASGFCY 160

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
              ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAFY  DRVMT SFHKFG+ FFPGTG++
Sbjct:   161 TNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAFYTNDRVMTCSFHKFGE-FFPGTGNL 219

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              +IG  +GK++AIN+PL+DGIDD S+  +F+ II+K++E Y P AIVLQCG DSL+GDRL
Sbjct:   220 TDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRL 279

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 270
             G FNLS+ GHA CV FV+   +P++V GGGGYT  NVAR W  ETG+     LP E+P N
Sbjct:   280 GPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYN 339

Query:   271 EYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-I 329
              Y +Y+AP   L + + ++ N NSK YL  I  QV+ NL + +H PSVQM EVP D   +
Sbjct:   340 GYYEYYAPTYELDVRSANMTNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDMEDL 399

Query:   330 PEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGDNDND 366
              + DED  +  +     Q  +DK +Q D EFY+ D++ D
Sbjct:   400 GDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-DDEKD 437

 Score = 99 (39.9 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             K +++YFYD DVG+ ++G  H MKPHR+  +     +   L++  +IY
Sbjct:    16 KRRVAYFYDQDVGNYFYGTGHCMKPHRI-RMAHSLIMNYELYKKMEIY 62


>UNIPROTKB|Q5A209 [details] [associations]
            symbol:RPD3 "Histone deacetylase" species:237561 "Candida
            albicans SC5314" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
            evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
            ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
            GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
            Uniprot:Q5A209
        Length = 480

 Score = 1030 (367.6 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
 Identities = 194/339 (57%), Positives = 248/339 (73%)

Query:    31 LYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             ++N+G+DCPVF+ L EFC+I  GG+++ A RLN    DIAIN+AGGLHHAKK EASGFCY
Sbjct:   101 IFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRGQADIAINYAGGLHHAKKSEASGFCY 160

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
              ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAFY  DRVMT SFHKFG+ FFPGTG++
Sbjct:   161 TNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAFYTNDRVMTCSFHKFGE-FFPGTGNL 219

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              +IG  +GK++AIN+PL+DGIDD S+  +F+ II+K++E Y P AIVLQCG DSL+GDRL
Sbjct:   220 TDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIITKIMEWYQPSAIVLQCGGDSLSGDRL 279

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 270
             G FNLS+ GHA CV FV+   +P++V GGGGYT  NVAR W  ETG+     LP E+P N
Sbjct:   280 GPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIRNVARTWAFETGVCNGEILPKELPYN 339

Query:   271 EYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-I 329
              Y +Y+AP   L + + ++ N NSK YL  I  QV+ NL + +H PSVQM EVP D   +
Sbjct:   340 GYYEYYAPTYELDVRSANMTNANSKEYLDKILTQVISNLDNTKHTPSVQMNEVPLDMEDL 399

Query:   330 PEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGDNDND 366
              + DED  +  +     Q  +DK +Q D EFY+ D++ D
Sbjct:   400 GDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-DDEKD 437

 Score = 99 (39.9 bits), Expect = 2.3e-112, Sum P(2) = 2.3e-112
 Identities = 18/48 (37%), Positives = 30/48 (62%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             K +++YFYD DVG+ ++G  H MKPHR+  +     +   L++  +IY
Sbjct:    16 KRRVAYFYDQDVGNYFYGTGHCMKPHRI-RMAHSLIMNYELYKKMEIY 62


>UNIPROTKB|F1M4V8 [details] [associations]
            symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
        Length = 465

 Score = 991 (353.9 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
 Identities = 192/343 (55%), Positives = 245/343 (71%)

Query:    26 MKPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEA 85
             +K  + +N+G+DCPVF  L EFCQ+  GG++ +A +LN Q  DIA+NWAG LHHAK  EA
Sbjct:    76 IKQMQRFNVGQDCPVFNGLSEFCQLSTGGSVASAVKLNKQQTDIAVNWAGDLHHAKNSEA 135

Query:    86 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 145
             SGFCY+ND+VL ILELLKY  RVL +DID HHGDG EEAFY  D VMTVSFH F     P
Sbjct:   136 SGFCYVNDIVLAILELLKYLQRVLCMDIDTHHGDGTEEAFYTADWVMTVSFHNF-----P 190

Query:   146 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 205
              TGD+++IG  +GK+YAIN PL+D IDD S   +FK ++SKV+E   P A+VLQCG+DSL
Sbjct:   191 VTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME---PSAVVLQCGSDSL 247

Query:   206 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPN 265
             +GD LG FNL+I GH +CV FVK FNLP+L+  GGGYT  NVARCWT ET + LDTE+PN
Sbjct:   248 SGDWLGSFNLTIKGH-KCVGFVKSFNLPMLMLRGGGYTIHNVARCWTYETAVTLDTEIPN 306

Query:   266 EIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPP 325
             E+P N+Y +YF P+  L I   +  N N+  YL  IK ++ ENLR + H P VQMQ +P 
Sbjct:   307 ELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYLE-IKQRLFENLRMLPHVPEVQMQAIPE 365

Query:   326 DFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             D  IPE   DEDE++PD+R+   + DK I  ++EF + D + +
Sbjct:   366 DA-IPEESGDEDEEDPDKRISICSSDKCIACEEEFSDSDEEGE 407

 Score = 97 (39.2 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
 Identities = 16/43 (37%), Positives = 27/43 (62%)

Query:     9 YFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             Y+YDGD G+  +G  HP+KPH++  +  + P+   L+   +IY
Sbjct:     1 YYYDGDAGNYNYGQGHPVKPHQI-RMTHNLPLSYGLYRKMEIY 42


>CGD|CAL0004384 [details] [associations]
            symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0044182
            "filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:1900429 "negative regulation of filamentous
            growth of a population of unicellular organisms" evidence=IMP]
            [GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
            "Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
            growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0045835 "negative
            regulation of meiosis" evidence=IEA] [GO:0032874 "positive
            regulation of stress-activated MAPK cascade" evidence=IEA]
            [GO:0006348 "chromatin silencing at telomere" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
            "chromatin silencing at centromere" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0045129 "NAD-independent histone deacetylase activity"
            evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
            activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
            GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
            ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
            KEGG:cal:CaO19.5377 Uniprot:Q5A839
        Length = 454

 Score = 972 (347.2 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
 Identities = 176/328 (53%), Positives = 238/328 (72%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCP+F+ ++++  IYAG ++DA R+L + + DIAINW+GGLHHAKK E SGFCY+
Sbjct:   121 FNIGDDCPIFDGMYDYSAIYAGASLDATRKLISGMSDIAINWSGGLHHAKKFEPSGFCYV 180

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY TDRVMTVSFHK+   FFPGTG V 
Sbjct:   181 NDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFFPGTGSVD 240

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   GK YAINVPL+DGIDD S+ RLFK+I+  ++  + P  IV QCGADSL  DRLG
Sbjct:   241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN- 270
             CFNL+I  H ECV+F+K F +P+LV GGGGYT  NV+R W  ET +L D  L ++IP   
Sbjct:   301 CFNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYL 360

Query:   271 EYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
                 +F P+ SL    +G I+N NSK YL +++  ++E +R + HAPSVQM E+PPD  +
Sbjct:   361 PTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIPPD--L 418

Query:   330 PEFDEDEQNPDERMDQHTQ-DKQIQRDD 356
                 EDE    + +++  + D++I +D+
Sbjct:   419 TGLTEDEDKAIQELNEDMERDEKIMKDE 446

 Score = 79 (32.9 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             +K  +SY Y+ +V   ++G  HPMKP RL  L +   +   L+E   +Y
Sbjct:    33 NKYNVSYHYNPEVSRFHYGALHPMKPFRLM-LTDHLVISYKLYEKMDLY 80


>UNIPROTKB|Q5A839 [details] [associations]
            symbol:HOS2 "Histone deacetylase" species:237561 "Candida
            albicans SC5314" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
            "filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
            switching" evidence=IMP] [GO:0044182 "filamentous growth of a
            population of unicellular organisms" evidence=IMP] [GO:1900429
            "negative regulation of filamentous growth of a population of
            unicellular organisms" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
            GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
            GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
            EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
            ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
            KEGG:cal:CaO19.5377 Uniprot:Q5A839
        Length = 454

 Score = 972 (347.2 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
 Identities = 176/328 (53%), Positives = 238/328 (72%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCP+F+ ++++  IYAG ++DA R+L + + DIAINW+GGLHHAKK E SGFCY+
Sbjct:   121 FNIGDDCPIFDGMYDYSAIYAGASLDATRKLISGMSDIAINWSGGLHHAKKFEPSGFCYV 180

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL I+ LL+ H RV+YIDID+HHGDGV+EAFY TDRVMTVSFHK+   FFPGTG V 
Sbjct:   181 NDIVLSIINLLRVHPRVMYIDIDLHHGDGVQEAFYNTDRVMTVSFHKYNGEFFPGTGSVD 240

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E+G   GK YAINVPL+DGIDD S+ RLFK+I+  ++  + P  IV QCGADSL  DRLG
Sbjct:   241 EVGIGSGKNYAINVPLRDGIDDESYIRLFKSIMEPLITKFQPTCIVQQCGADSLGYDRLG 300

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN- 270
             CFNL+I  H ECV+F+K F +P+LV GGGGYT  NV+R W  ET +L D  L ++IP   
Sbjct:   301 CFNLNIRAHGECVKFIKSFGIPMLVVGGGGYTPRNVSRLWCYETSVLNDVNLDHKIPNYL 360

Query:   271 EYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
                 +F P+ SL    +G I+N NSK YL +++  ++E +R + HAPSVQM E+PPD  +
Sbjct:   361 PTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSVQTTIMEQIRYLNHAPSVQMYEIPPD--L 418

Query:   330 PEFDEDEQNPDERMDQHTQ-DKQIQRDD 356
                 EDE    + +++  + D++I +D+
Sbjct:   419 TGLTEDEDKAIQELNEDMERDEKIMKDE 446

 Score = 79 (32.9 bits), Expect = 4.0e-104, Sum P(2) = 4.0e-104
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIY 51
             +K  +SY Y+ +V   ++G  HPMKP RL  L +   +   L+E   +Y
Sbjct:    33 NKYNVSYHYNPEVSRFHYGALHPMKPFRLM-LTDHLVISYKLYEKMDLY 80


>SGD|S000003162 [details] [associations]
            symbol:HOS2 "Histone deacetylase and subunit of Set3 and
            Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
            histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
            evidence=IDA] [GO:0032874 "positive regulation of stress-activated
            MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
            evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
            activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
            deacetylase activity" evidence=IDA] [GO:0045835 "negative
            regulation of meiosis" evidence=IMP] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
            GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
            RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
            DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
            PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
            CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
            Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
            GO:GO:0045129 Uniprot:P53096
        Length = 452

 Score = 959 (342.6 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
 Identities = 183/335 (54%), Positives = 238/335 (71%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCP+F+NL+++  +Y G ++DA R+L N   DIAINW+GGLHHAKK   SGFCY+
Sbjct:   112 FNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYV 171

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY TDRV T+SFHK+   FFPGTGD+ 
Sbjct:   172 NDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLT 231

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  ++ T+ P  IV QCGADSL  DRLG
Sbjct:   232 EIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLG 291

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN- 270
             CFNL+I  H ECV+FVK F LP+LV GGGGYT  NV+R WT ETGIL D  LP +IPE+ 
Sbjct:   292 CFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDI 351

Query:   271 EYIKYFAPECSLR-IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQ-EVPPDFY 328
              +   F P+ SL  + +   EN NSK  L  I+++ LEN+R +Q APSV+M  E  P   
Sbjct:   352 PFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAECIPTQD 411

Query:   329 IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
             I    E+E    + M++ T+     R +E  E +N
Sbjct:   412 ISALTEEEDKIIQEMNEETEADSSNRLEEM-EKEN 445

 Score = 69 (29.3 bits), Expect = 1.1e-101, Sum P(2) = 1.1e-101
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++SY ++  V   ++G  HPMKP RL
Sbjct:    27 RVSYHFNSKVSHYHYGVKHPMKPFRL 52


>POMBASE|SPAC3G9.07c [details] [associations]
            symbol:hos2 "histone deacetylase (class I) Hos2"
            species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IC] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEP] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0034739 "histone
            deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
            "Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
            density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
            GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
            GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
            GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
            ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
            GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
            GO:GO:0034739 Uniprot:O13298
        Length = 434

 Score = 938 (335.3 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
 Identities = 175/317 (55%), Positives = 233/317 (73%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N+G+DCPVF+  +EF Q  AG ++DA+R+L     DIAINW+GGLHHAK+ EASGFCY+
Sbjct:   111 FNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYV 170

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND+VL IL +L++  RVLYIDID+HHGDGV++AFY +DRV+TVSFHK+   FFP TG+  
Sbjct:   171 NDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNFD 230

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             E G + GK++A+NVPL+DGI D  +T LFK+II   + T+ P AIVLQCGADSL  DRLG
Sbjct:   231 ENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLG 290

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP-EN 270
              FNLSI  H ECVRF + FN+P+LV GGGGYT  NVAR W  ET I ++ ++P+E+P E 
Sbjct:   291 VFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRET 350

Query:   271 EYIKYFAPECSL--RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY 328
              Y ++FAP+ +L  R+    IEN N+   L  ++++ LE LR +  APSVQMQ++PPD  
Sbjct:   351 LYYEFFAPDYTLHPRLTT-KIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIPPDLT 409

Query:   329 IPEFDEDEQNPDERMDQ 345
                 +EDE+  DE +D+
Sbjct:   410 GHLEEEDERLNDEYLDK 426

 Score = 86 (35.3 bits), Expect = 2.8e-101, Sum P(2) = 2.8e-101
 Identities = 13/28 (46%), Positives = 20/28 (71%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K +++Y  D  VG+ ++G  HPMKPHR+
Sbjct:    25 KKRVTYHLDEQVGNYHYGDKHPMKPHRI 52


>WB|WBGene00001835 [details] [associations]
            symbol:hda-2 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
            "positive regulation of locomotion" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=ISS] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0045138 "tail tip
            morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
            GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
            GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
            GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
            ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
            STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
            KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
            InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
        Length = 507

 Score = 908 (324.7 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
 Identities = 175/322 (54%), Positives = 233/322 (72%)

Query:    30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
             R +N+GEDCP+F  L+++C +YAGG+++ ARRLN+++ DI INW GGLHHAKK EASGFC
Sbjct:   113 RQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFC 172

Query:    90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
             Y+ND+VLGILELLKYH RVLYIDID+HHGDGV+EAF  +DRVMTVSFH+FG  +FPG+G 
Sbjct:   173 YVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQ-YFPGSGS 231

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
             + + G   GK++AINVPL   I D  + +LF+++IS V E + P AIVLQCG+DSL  DR
Sbjct:   232 IMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDR 291

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
             LG F LS + HA  V++VK    PL+V GGGGYT  NVARCW +ETG++L   + +EIP 
Sbjct:   292 LGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPG 351

Query:   270 NE-YIKYFAPECSLRIPN--GHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
                Y  YF P   LR PN    + + NS +YL++I+ + L  LR I+ APSVQMQ +   
Sbjct:   352 TSLYSHYFTPRL-LR-PNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNIV-G 408

Query:   327 FYIPEFDEDEQNPDERMDQHTQ 348
               + E ++ E+N  ER+ + ++
Sbjct:   409 IRLDEIEQIEEN--ERLQKSSK 428

 Score = 88 (36.0 bits), Expect = 2.6e-98, Sum P(2) = 2.6e-98
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAA 59
             K  ++Y+Y  DVG  ++G  HPMKP RL  +  D  V   + ++  +     +DAA
Sbjct:    28 KRNVAYYYHKDVGHFHYGQLHPMKPQRLV-VCNDLVVSYEMPKYMTVVESPKLDAA 82


>ASPGD|ASPL0000013866 [details] [associations]
            symbol:hosA species:162425 "Emericella nidulans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0045129 "NAD-independent histone deacetylase activity"
            evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
            activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0045835 "negative
            regulation of meiosis" evidence=IEA] [GO:0032874 "positive
            regulation of stress-activated MAPK cascade" evidence=IEA]
            [GO:0006348 "chromatin silencing at telomere" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
            EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
            KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
            ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
            EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
            Uniprot:Q5B6M4
        Length = 482

 Score = 912 (326.1 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
 Identities = 174/323 (53%), Positives = 226/323 (69%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             +N G+DCP+F+ LF++C +YAG ++DAAR+L N   DIAINW+GGLHHAKK EASGFCY+
Sbjct:   128 FNFGDDCPIFDGLFQYCSLYAGASLDAARKLCNNQADIAINWSGGLHHAKKAEASGFCYV 187

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPGTGDV 150
             ND+VL IL+LL+ H RV+YIDIDVHHGDGVE+AF+ TDRV+TVSFHK+  + FFPGTG +
Sbjct:   188 NDIVLAILQLLRIHPRVMYIDIDVHHGDGVEQAFWSTDRVLTVSFHKYDKENFFPGTGPL 247

Query:   151 KEIGERE----GKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
                G       G  +A+NVPL DGIDD S+ +LFK ++   V  + P AIVLQCGADSL 
Sbjct:   248 DSTGPTHPLNPGAHHAVNVPLHDGIDDESYVQLFKDVVGACVSKFRPAAIVLQCGADSLG 307

Query:   207 GDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE--LP 264
              DRLGCFNL++  H  CV + K F LP+LV GGGGYT  NV+R W  ET IL+D +  + 
Sbjct:   308 CDRLGCFNLNVAAHGACVAYTKTFGLPMLVVGGGGYTPRNVSRAWAHETSILIDAQDKIN 367

Query:   265 NEIPEN-EYIKYFAPECSLRIPNGH---IENLNSKSYLSTIKMQVLENLRSIQHAPSVQM 320
               IP N  +  +F P+ SL  P      +EN NS++YL+TI   + E LR +Q APSVQM
Sbjct:   368 PVIPSNVAFRNHFGPDFSLFPPLSEMRKLENKNSRAYLATIVQTITEQLRYLQAAPSVQM 427

Query:   321 QEVPPDFYIPEFDEDEQNPDERM 343
               +PPD  +   +E E+  +E +
Sbjct:   428 SVIPPDL-LGLREETEKEIEEEI 449

 Score = 55 (24.4 bits), Expect = 3.0e-95, Sum P(2) = 3.0e-95
 Identities = 11/26 (42%), Positives = 17/26 (65%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++S+  +  V   +FG +HPMKP RL
Sbjct:    38 RVSWHANPAVELHHFGQSHPMKPWRL 63


>TAIR|locus:2157111 [details] [associations]
            symbol:HDA7 "histone deacetylase7" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
            IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
            ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
            EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
            TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
            Genevestigator:Q9FH09 Uniprot:Q9FH09
        Length = 409

 Score = 858 (307.1 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
 Identities = 171/326 (52%), Positives = 221/326 (67%)

Query:    24 HPMKPHRL--YNLGEDC--PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHH 79
             HP     L  +N+  D   PVF NLF++C+ YAGG+I AA +LN Q  DIAINWAGG+HH
Sbjct:    89 HPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHH 148

Query:    80 AKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 139
              KK +ASGF Y+ND+VL ILELLK   RVLYI+I   HGD VEEAF  TDRVMTVSFHK 
Sbjct:   149 VKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKV 208

Query:   140 GDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQ 199
             GD     TGD+ + GE +G++Y++N PLKDG+DD S   LF  +I + +E Y P  IVLQ
Sbjct:   209 GD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQ 263

Query:   200 CGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 259
             CGADSLAGD  G FNLSI GH +C+++V+ FN+PL++ GGGGYT  NVARCW  ET I +
Sbjct:   264 CGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAV 323

Query:   260 DTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQ 319
               +L N++P N+Y+KYF P+  L I   + +NLN++  + T++  +L  L  + HAPSV 
Sbjct:   324 GEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVP 383

Query:   320 MQEVPPDFYIPEFDE-D-EQNPDERM 343
              Q+ P      E  E D E+  D R+
Sbjct:   384 FQDTPSSSQATEAAEVDMEKRNDPRI 409

 Score = 82 (33.9 bits), Expect = 2.1e-92, Sum P(2) = 2.1e-92
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             K ++SYFY+  +G  Y+G N P KP R+
Sbjct:     9 KRRVSYFYEPMIGDYYYGVNQPTKPQRI 36


>UNIPROTKB|E7ESJ6 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
            ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
            Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
            Bgee:E7ESJ6 Uniprot:E7ESJ6
        Length = 219

 Score = 724 (259.9 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
 Identities = 127/173 (73%), Positives = 149/173 (86%)

Query:    66 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 125
             +CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAF
Sbjct:    47 ICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 106

Query:   126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
             Y TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I+
Sbjct:   107 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVIN 166

Query:   186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 238
             +VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV G
Sbjct:   167 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG 219

 Score = 103 (41.3 bits), Expect = 1.7e-80, Sum P(2) = 1.7e-80
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>UNIPROTKB|F5GXM1 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
            ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
            ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
            Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
            Bgee:F5GXM1 Uniprot:F5GXM1
        Length = 289

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 132/237 (55%), Positives = 179/237 (75%)

Query:   132 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 191
             MTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E +
Sbjct:     1 MTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMF 59

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCW 251
              P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCW
Sbjct:    60 QPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCW 119

Query:   252 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRS 311
             T ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR 
Sbjct:   120 TYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRM 179

Query:   312 IQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             + HAP VQMQ +P D  IPE   DEDE +PD+R+   + DK+I  ++EF + + + +
Sbjct:   180 LPHAPGVQMQAIPEDA-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGE 235


>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
            symbol:hdac8 "histone deacetylase 8" species:7955
            "Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005976 "polysaccharide metabolic process" evidence=IEA]
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
            "hydrolase activity, hydrolyzing O-glycosyl compounds"
            evidence=IEA] [GO:0005977 "glycogen metabolic process"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
            InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
            Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
            SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
            InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
            GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
            IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
            Bgee:E7F4R5 Uniprot:E7F4R5
        Length = 1376

 Score = 730 (262.0 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
 Identities = 132/281 (46%), Positives = 190/281 (67%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             + LG DCPV E +F++     G T+ AA+ L +  CD+AINWAGG HHAKK EASGFCY+
Sbjct:  1095 FGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGFCYV 1154

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:  1155 NDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVT 1214

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             + G  +G++YA+NVP +DG+ D  + + F +++ +V   + P A+V+Q GAD++AGD + 
Sbjct:  1215 DTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMC 1274

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G A+C+ ++  + LP L+ GGGGY   N ARCWT  TG +L   L +EIP++E
Sbjct:  1275 SFNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPDHE 1334

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+ SL I      + N   +L  +   +  NL+++
Sbjct:  1335 FFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLKNV 1375

 Score = 41 (19.5 bits), Expect = 1.8e-72, Sum P(2) = 1.8e-72
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query:     3 SKDKISYFYDGDVGSVYF---GPNHPMK-PHRLYNLGEDCPVFENL 44
             +K++I     G  G   F   G   P + P+RLY    +  +FEN+
Sbjct:   279 TKEEIISKLQGRYGCCRFLRDGHKTPKEDPNRLYYESAELKLFENI 324


>UNIPROTKB|F1NFY6 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
            Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
        Length = 377

 Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
 Identities = 133/290 (45%), Positives = 190/290 (65%)

Query:    23 NHPMKPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 82
             +HP      Y LG DCP  E +F++     G TI AA+ L +  C +AINW GG HHAKK
Sbjct:    89 DHPESVE--YGLGYDCPATEGIFDYAAAVGGATITAAQCLLDGKCKVAINWPGGWHHAKK 146

Query:    83 CEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 142
              EASGFCY+ND VLGIL L +   R+LYID+D+HHGDGVE+AF FT +VMTVS HKF   
Sbjct:   147 DEASGFCYLNDAVLGILRLRQKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPG 206

Query:   143 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 202
             FFPGTGDV +IG  +G++Y++NVP++DGI D  + ++ +T++ +V   + P A+VLQ GA
Sbjct:   207 FFPGTGDVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGA 266

Query:   203 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 262
             D++AGD +  FN++ +G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   
Sbjct:   267 DTIAGDPMCSFNMTPEGVGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGRT 326

Query:   263 LPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             L +EIP++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   327 LSSEIPDHEFFTEYGPDYVLEITPSCRPDRNDPQRIQEILNLIKGNLKHV 376


>UNIPROTKB|Q9BY41 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
            specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
            evidence=TAS] [GO:0071922 "regulation of cohesin localization to
            chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
            evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
            assembly or disassembly" evidence=TAS] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
            Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
            GO:GO:0006333 GO:GO:0008134
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
            BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
            CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
            EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
            EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
            IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
            IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
            RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
            PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
            PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
            PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
            PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
            PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
            PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
            PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
            ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
            STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
            PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
            Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
            KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
            HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
            Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
            OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
            ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
            GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
            CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
            Uniprot:Q9BY41
        Length = 377

 Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
 Identities = 127/281 (45%), Positives = 189/281 (67%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   276 SFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>MGI|MGI:1917565 [details] [associations]
            symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0004407 "histone deacetylase activity" evidence=TAS]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
            cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
            cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
            EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
            EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
            RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
            SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
            Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
            UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
            ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
            Genevestigator:Q8VH37 Uniprot:Q8VH37
        Length = 377

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 128/281 (45%), Positives = 188/281 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     GGTI AA+ L +  C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGD+ 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  +  + ++++ +V + + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   276 SFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>RGD|1562895 [details] [associations]
            symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
            chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
            of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
            EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
            RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
            SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
            GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
            NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
        Length = 377

 Score = 714 (256.4 bits), Expect = 1.6e-70, P = 1.6e-70
 Identities = 128/281 (45%), Positives = 188/281 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     GGTI AA+ L +  C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGD+ 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  +  + ++++ +V + + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   276 SFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>TAIR|locus:2076053 [details] [associations]
            symbol:hda17 "histone deacetylase 17" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
            "histone deacetylation" evidence=IEA] INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
            ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
            RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
            SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
            KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
            PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
        Length = 158

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 127/154 (82%), Positives = 145/154 (94%)

Query:   213 FNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEY 272
             F++   GHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI EN+Y
Sbjct:     3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62

Query:   273 IKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEF 332
             IKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+F
Sbjct:    63 IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDF 122

Query:   333 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             DEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct:   123 DEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156


>UNIPROTKB|J9P5B2 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
            Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
        Length = 415

 Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
 Identities = 127/281 (45%), Positives = 187/281 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:   134 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 193

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   194 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 253

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AGD + 
Sbjct:   254 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 313

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   314 SFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 373

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   374 FFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 414


>UNIPROTKB|G3MYR9 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
            EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
            EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
            EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
            EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
        Length = 377

 Score = 707 (253.9 bits), Expect = 8.9e-70, P = 8.9e-70
 Identities = 127/281 (45%), Positives = 187/281 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   276 SFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   336 FFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376


>UNIPROTKB|Q0VCB2 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
            taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
            [GO:0071922 "regulation of cohesin localization to chromatin"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
            GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
            IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
            ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
            CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
        Length = 377

 Score = 698 (250.8 bits), Expect = 8.0e-69, P = 8.0e-69
 Identities = 126/281 (44%), Positives = 186/281 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++D I D  +  + ++++ +V   + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
              FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP++E
Sbjct:   276 SFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335

Query:   272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
             +   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   336 FFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376


>UNIPROTKB|E2RQK6 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
            Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
        Length = 383

 Score = 687 (246.9 bits), Expect = 1.2e-67, P = 1.2e-67
 Identities = 124/256 (48%), Positives = 177/256 (69%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AGD + 
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275

Query:   212 CFNLSIDGHAECVRFVKKFNLPLLVTGG--GGYTKENVARCWTVETGILLDTELPNEIPE 269
              FN++  G  +C++++ ++ L  L+ GG  GGY   N ARCWT  TG++L   L +EIP+
Sbjct:   276 SFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSSEIPD 335

Query:   270 NEYIKYFAPECSLRIP 285
             +E     +P   L IP
Sbjct:   336 HEVKSCLSPVSVLIIP 351


>TAIR|locus:2098105 [details] [associations]
            symbol:hda10 "histone deacetylase 10" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
            PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
            ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
            GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
            HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
            ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
        Length = 142

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 110/136 (80%), Positives = 126/136 (92%)

Query:   234 LLVTGG---GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIE 290
             +L TG    GGYTKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHIE
Sbjct:     5 MLFTGHAECGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIE 64

Query:   291 NLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDK 350
             NLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R+DQ ++DK
Sbjct:    65 NLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDK 124

Query:   351 QIQRDDEFYEGDNDND 366
             QIQRDDE+++GDNDND
Sbjct:   125 QIQRDDEYFDGDNDND 140


>RGD|1309799 [details] [associations]
            symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0001106
            "RNA polymerase II transcription corepressor activity"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO]
            [GO:0003714 "transcription corepressor activity" evidence=ISO]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
            differentiation" evidence=ISO] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
            deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
            evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
            development" evidence=ISO] [GO:0030182 "neuron differentiation"
            evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0033613 "activating transcription factor binding" evidence=ISO]
            [GO:0034599 "cellular response to oxidative stress" evidence=IDA]
            [GO:0042475 "odontogenesis of dentin-containing tooth"
            evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
            [GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
            [GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
            "neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
            evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
            by host of viral transcription" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
            formation" evidence=ISO] [GO:0061029 "eyelid development in
            camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
            formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
            evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
            evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
            GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
            GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
            ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
            OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
        Length = 256

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 110/205 (53%), Positives = 147/205 (71%)

Query:   164 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 223
             N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+C
Sbjct:     1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 60

Query:   224 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 283
             V FVK FNLP+L+ GG GYT  NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L 
Sbjct:    61 VEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 120

Query:   284 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDE 341
             I   ++ N N+  YL  IK ++ ENLR + H P VQMQ +P D  IPE   DEDE++PD+
Sbjct:   121 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPEDA-IPEESGDEDEEDPDK 179

Query:   342 RMDQHTQDKQIQRDDEFYEGDNDND 366
              +   + DK I  ++EF + D + +
Sbjct:   180 PISICSSDKCIACEEEFPDSDEEGE 204


>UNIPROTKB|Q5TEE2 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
            EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
            STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
        Length = 211

 Score = 499 (180.7 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
 Identities = 89/118 (75%), Positives = 105/118 (88%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 117
             +A +LN Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HH
Sbjct:    95 SAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH 154

Query:   118 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTS 175
             GDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S
Sbjct:   155 GDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDES 211

 Score = 115 (45.5 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
 Identities = 17/29 (58%), Positives = 24/29 (82%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRI 35


>UNIPROTKB|E7EVA8 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
            ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
            Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
            Uniprot:E7EVA8
        Length = 299

 Score = 293 (108.2 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
 Identities = 51/89 (57%), Positives = 65/89 (73%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDG 120
             ND VLGIL L +   R+LY+D+D+HHGDG
Sbjct:   156 NDAVLGILRLRRKFERILYVDLDLHHGDG 184

 Score = 291 (107.5 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
 Identities = 47/114 (41%), Positives = 82/114 (71%)

Query:   146 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 205
             GTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P A+VLQ GAD++
Sbjct:   184 GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTI 243

Query:   206 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 259
             AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L
Sbjct:   244 AGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVIL 297


>UNIPROTKB|A6NGJ7 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
            HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
            STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
            Bgee:A6NGJ7 Uniprot:A6NGJ7
        Length = 248

 Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
 Identities = 97/199 (48%), Positives = 145/199 (72%)

Query:    74 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMT 133
             A  LH   + EASGFCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMT
Sbjct:    47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMT 106

Query:   134 VSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP 193
             VS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P
Sbjct:   107 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNP 166

Query:   194 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 253
              A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT 
Sbjct:   167 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTY 226

Query:   254 ETGILLDTELPNEIPENEY 272
              TG++L   L +EIP++E+
Sbjct:   227 LTGVILGKTLSSEIPDHEF 245


>UNIPROTKB|Q74DU3 [details] [associations]
            symbol:GSU1222 "Histone deacetylase family protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
            GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
            ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
            Uniprot:Q74DU3
        Length = 385

 Score = 534 (193.0 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 106/240 (44%), Positives = 147/240 (61%)

Query:    32 YNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             Y LG+ D PVF  L+++ ++ AGGTI+AAR +  +  DIA N AGG HHA + +ASGF Y
Sbjct:    87 YGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAEEGYDIAFNLAGGWHHAHRAKASGFSY 146

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             +ND V+ I  LL+   RV Y+DID HHGDGV+EAFY TDRV+T+S H+ G  FFPGTG  
Sbjct:   147 LNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEAFYDTDRVLTISIHESGMYFFPGTGFE 206

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              E G   G  Y++N+PL    DD  F + F  +   ++  Y P  +V Q GAD+   D L
Sbjct:   207 GETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPL 266

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 270
                 ++   +   +R +K   +P +  GGGGY   NVAR WT+  G++   ELP  +P++
Sbjct:   267 TRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVELPPRLPDS 326

 Score = 40 (19.1 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHR 30
             + +  Y  D     +G +HP K  R
Sbjct:     4 RTALIYSNDFARFSYGDDHPFKIQR 28


>TIGR_CMR|GSU_1222 [details] [associations]
            symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
            protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
            GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
            ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
            Uniprot:Q74DU3
        Length = 385

 Score = 534 (193.0 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 106/240 (44%), Positives = 147/240 (61%)

Query:    32 YNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             Y LG+ D PVF  L+++ ++ AGGTI+AAR +  +  DIA N AGG HHA + +ASGF Y
Sbjct:    87 YGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAEEGYDIAFNLAGGWHHAHRAKASGFSY 146

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             +ND V+ I  LL+   RV Y+DID HHGDGV+EAFY TDRV+T+S H+ G  FFPGTG  
Sbjct:   147 LNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEAFYDTDRVLTISIHESGMYFFPGTGFE 206

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              E G   G  Y++N+PL    DD  F + F  +   ++  Y P  +V Q GAD+   D L
Sbjct:   207 GETGTGAGTGYSVNIPLVAHADDALFMKAFDEVAFPLLAAYNPDVLVTQLGADTFRTDPL 266

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 270
                 ++   +   +R +K   +P +  GGGGY   NVAR WT+  G++   ELP  +P++
Sbjct:   267 TRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNLVNVARAWTLAWGVMNGVELPPRLPDS 326

 Score = 40 (19.1 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHR 30
             + +  Y  D     +G +HP K  R
Sbjct:     4 RTALIYSNDFARFSYGDDHPFKIQR 28


>CGD|CAL0001747 [details] [associations]
            symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
            "peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
            RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
            GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
            KEGG:cal:CaO19.4411 Uniprot:Q59Q78
        Length = 436

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 107/291 (36%), Positives = 171/291 (58%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD-----IAINWAGGLHHAKKCEAS 86
             Y L  DC  F +L  + Q+ A  +I+AAR++  Q+ +     IA+NW GG HH  K  A+
Sbjct:   150 YGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAA 209

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL I  L K    V Y+D+D+HHGDGVE AF F+ +V T S H++   F+PG
Sbjct:   210 GFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYPG 269

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TG +K    RE  +   N+P + G++D+S   + K I++ ++  + P AIV+QCG D LA
Sbjct:   270 TGSLKS--SRENTY---NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLA 324

Query:   207 GDRLGCFNLSIDGHAECVRFV-KKFN-LPLLVTGGGGYTKENVARCWTVETGILL---DT 261
              D    +N++I G+ + + ++   F+ +P+++ GGGGY+    A+CWT  TG +L   D 
Sbjct:   325 LDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSDI 384

Query:   262 ELPNEIPENEYIKYFAPECSLRIPNGH------IENLNSKSYLSTIKMQVL 306
             +  + +PE++ +  +  +   R    H      +++ NS  YL+ IK  +L
Sbjct:   385 DTWDILPEHKNLDAYEKD-GFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434


>UNIPROTKB|Q59Q78 [details] [associations]
            symbol:HOS1 "Likely histone deacetylase Hos1p"
            species:237561 "Candida albicans SC5314" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
            RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
            GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
            KEGG:cal:CaO19.4411 Uniprot:Q59Q78
        Length = 436

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 107/291 (36%), Positives = 171/291 (58%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD-----IAINWAGGLHHAKKCEAS 86
             Y L  DC  F +L  + Q+ A  +I+AAR++  Q+ +     IA+NW GG HH  K  A+
Sbjct:   150 YGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHAA 209

Query:    87 GFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPG 146
             GFCY+ND+VL I  L K    V Y+D+D+HHGDGVE AF F+ +V T S H++   F+PG
Sbjct:   210 GFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYPG 269

Query:   147 TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLA 206
             TG +K    RE  +   N+P + G++D+S   + K I++ ++  + P AIV+QCG D LA
Sbjct:   270 TGSLKS--SRENTY---NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGLA 324

Query:   207 GDRLGCFNLSIDGHAECVRFV-KKFN-LPLLVTGGGGYTKENVARCWTVETGILL---DT 261
              D    +N++I G+ + + ++   F+ +P+++ GGGGY+    A+CWT  TG +L   D 
Sbjct:   325 LDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSDI 384

Query:   262 ELPNEIPENEYIKYFAPECSLRIPNGH------IENLNSKSYLSTIKMQVL 306
             +  + +PE++ +  +  +   R    H      +++ NS  YL+ IK  +L
Sbjct:   385 DTWDILPEHKNLDAYEKD-GFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434


>UNIPROTKB|A6NMT1 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
            ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
            STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
            Bgee:A6NMT1 Uniprot:A6NMT1
        Length = 253

 Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
 Identities = 83/148 (56%), Positives = 111/148 (75%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRL 179
             ++G  +G++Y++NVP++DGI D  + ++
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYQI 243


>UNIPROTKB|I3L5X0 [details] [associations]
            symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062889 EMBL:CU466457
            Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
        Length = 256

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 83/145 (57%), Positives = 109/145 (75%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGDV 
Sbjct:   156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSF 176
             ++G  +G++Y++NVP++DGI D  +
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKY 240


>UNIPROTKB|E7ENE4 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
            ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
            ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
        Length = 272

 Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
 Identities = 81/152 (53%), Positives = 112/152 (73%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
             ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPG  DV 
Sbjct:   156 NDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGKSDVS 215

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 183
             ++G  +G++Y++NVP++DGI D  + ++ +++
Sbjct:   216 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESV 247


>SGD|S000006272 [details] [associations]
            symbol:HOS1 "Class I histone deacetylase (HDAC) family
            member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
            deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
            activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
            evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
            EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
            RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
            DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
            EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
            KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
            GermOnline:YPR068C Uniprot:Q12214
        Length = 470

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 90/227 (39%), Positives = 134/227 (59%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             YNL  DCP+F  L  +CQ+  G T++    L+     I INW GG HHA K  ASGFCYI
Sbjct:   164 YNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFCYI 223

Query:    92 NDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             ND+VL I  L K    ++ Y+D D+HHGDGVE+AF ++ ++ T+S H +   FFPGTG +
Sbjct:   224 NDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTGSL 283

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              +   R+ K   +N+PLK G DD     +   I++ ++E + P A++++CG D L GDR 
Sbjct:   284 SD--SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGDRF 340

Query:   211 GCFNLSIDGHAECV-RFVKKF-NLPLLVTGGGGYTKENVARCWTVET 255
               + L+I G +  +   +K +    + + GGGGY    ++R +T  T
Sbjct:   341 NEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387


>UNIPROTKB|Q3AFN8 [details] [associations]
            symbol:acuC "Acetoin utilization protein AcuC"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
            GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
            HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
            BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
        Length = 383

 Score = 374 (136.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 91/289 (31%), Positives = 143/289 (49%)

Query:    32 YNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             + LG ED PVF  + E   + AGG+   A  +     D   N AGGLHHA +  ASGFC 
Sbjct:    85 FGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGEADHVFNIAGGLHHALRDAASGFCI 144

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
              NDL + I +  +   +V Y+D+D HHGDGV+  FY    V+T+S H+ G   FPGTG +
Sbjct:   145 YNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISIHETGRYLFPGTGSI 204

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              E+GE       IN+PL+   +D S+    + I+ +++  + P  +V Q G DS   D L
Sbjct:   205 TELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPL 264

Query:   211 GCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGYTKENVA-RCWTVETGILLDTELP 264
                  +     E  + + +    +     L  GGGGY    V  R WT+    + +  LP
Sbjct:   265 THLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYDYWRVVPRAWTIVWAEMTERSLP 324

Query:   265 NEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQ 313
              ++P   + KY + +  + +P   ++  +S   L   +    +N R+++
Sbjct:   325 YDVPATFWRKYES-KAGVFLPRTFLDEGSSGIPLGRRREITSKNQRTVE 372

 Score = 38 (18.4 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHR 30
             K    Y  D  S     +HP+ P R
Sbjct:     4 KAYLIYSDDYLSYRLAEDHPLNPQR 28


>TIGR_CMR|CHY_0174 [details] [associations]
            symbol:CHY_0174 "acetoin utilization protein AcuC"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
            GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
            HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
            BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
        Length = 383

 Score = 374 (136.7 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 91/289 (31%), Positives = 143/289 (49%)

Query:    32 YNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             + LG ED PVF  + E   + AGG+   A  +     D   N AGGLHHA +  ASGFC 
Sbjct:    85 FGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGEADHVFNIAGGLHHALRDAASGFCI 144

Query:    91 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
              NDL + I +  +   +V Y+D+D HHGDGV+  FY    V+T+S H+ G   FPGTG +
Sbjct:   145 YNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFYSDPGVLTISIHETGRYLFPGTGSI 204

Query:   151 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              E+GE       IN+PL+   +D S+    + I+ +++  + P  +V Q G DS   D L
Sbjct:   205 TELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPELIRKFKPDILVTQHGCDSHRFDPL 264

Query:   211 GCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGYTKENVA-RCWTVETGILLDTELP 264
                  +     E  + + +    +     L  GGGGY    V  R WT+    + +  LP
Sbjct:   265 THLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGGYDYWRVVPRAWTIVWAEMTERSLP 324

Query:   265 NEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQ 313
              ++P   + KY + +  + +P   ++  +S   L   +    +N R+++
Sbjct:   325 YDVPATFWRKYES-KAGVFLPRTFLDEGSSGIPLGRRREITSKNQRTVE 372

 Score = 38 (18.4 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHR 30
             K    Y  D  S     +HP+ P R
Sbjct:     4 KAYLIYSDDYLSYRLAEDHPLNPQR 28


>UNIPROTKB|H3BM24 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
        Length = 161

 Score = 299 (110.3 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 52/78 (66%), Positives = 64/78 (82%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEAS 86
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EAS
Sbjct:    80 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEAS 139

Query:    87 GFCYINDLVLGILELLKY 104
             GFCY+ND+VL ILELLKY
Sbjct:   140 GFCYVNDIVLAILELLKY 157

 Score = 113 (44.8 bits), Expect = 8.2e-37, Sum P(2) = 8.2e-37
 Identities = 16/26 (61%), Positives = 22/26 (84%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRL 31
             K+ Y+YDGD+G+ Y+G  HPMKPHR+
Sbjct:     1 KVCYYYDGDIGNYYYGQGHPMKPHRI 26


>UNIPROTKB|Q81KS2 [details] [associations]
            symbol:acuC "Acetoin utilization protein AcuC" species:1392
            "Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
            RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
            DNASU:1086757 EnsemblBacteria:EBBACT00000011277
            EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
            GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
            KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
            BioCyc:BANT260799:GJAJ-4620-MONOMER
            BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
        Length = 388

 Score = 366 (133.9 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 85/230 (36%), Positives = 121/230 (52%)

Query:    32 YNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             Y LG ED P+F N+ E   +  GGT+ A   + +     A+N  GGLHH  + +ASGFC 
Sbjct:    84 YGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKHALNLGGGLHHGFRGKASGFCI 143

Query:    91 INDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
              ND  + +  + K Y  RVLYID D HHGDGV+ +FY    V T+S H+ G   FPGTG 
Sbjct:   144 YNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISLHETGRYLFPGTGA 203

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
             V E G+  G  Y+ NVPL    +D SF   ++T++ +V   + P  I+ Q GAD+   D 
Sbjct:   204 VNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDP 263

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGYTKENVA-RCWTV 253
             L     +++ + E  +  ++          +  GGGGY    V  R W +
Sbjct:   264 LTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGYDHWRVVPRAWAL 313

 Score = 41 (19.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 7/24 (29%), Positives = 11/24 (45%)

Query:     8 SYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ Y  D     F P+HP    R+
Sbjct:     4 AFIYSDDFRGYSFSPDHPFNQLRV 27


>TIGR_CMR|BA_4918 [details] [associations]
            symbol:BA_4918 "acetoin utilization protein AcuC"
            species:198094 "Bacillus anthracis str. Ames" [GO:0003674
            "molecular_function" evidence=ND] [GO:0006091 "generation of
            precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
            PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
            RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
            DNASU:1086757 EnsemblBacteria:EBBACT00000011277
            EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
            GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
            KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
            BioCyc:BANT260799:GJAJ-4620-MONOMER
            BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
        Length = 388

 Score = 366 (133.9 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 85/230 (36%), Positives = 121/230 (52%)

Query:    32 YNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             Y LG ED P+F N+ E   +  GGT+ A   + +     A+N  GGLHH  + +ASGFC 
Sbjct:    84 YGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVKHALNLGGGLHHGFRGKASGFCI 143

Query:    91 INDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
              ND  + +  + K Y  RVLYID D HHGDGV+ +FY    V T+S H+ G   FPGTG 
Sbjct:   144 YNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYDDPNVCTISLHETGRYLFPGTGA 203

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
             V E G+  G  Y+ NVPL    +D SF   ++T++ +V   + P  I+ Q GAD+   D 
Sbjct:   204 VNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEVAAYFKPDIILTQNGADAHYYDP 263

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGYTKENVA-RCWTV 253
             L     +++ + E  +  ++          +  GGGGY    V  R W +
Sbjct:   264 LTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGYDHWRVVPRAWAL 313

 Score = 41 (19.5 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
 Identities = 7/24 (29%), Positives = 11/24 (45%)

Query:     8 SYFYDGDVGSVYFGPNHPMKPHRL 31
             ++ Y  D     F P+HP    R+
Sbjct:     4 AFIYSDDFRGYSFSPDHPFNQLRV 27


>UNIPROTKB|B4DQE7 [details] [associations]
            symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
            deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
            deacetylase activity" evidence=IEA] InterPro:IPR003084
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
            EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
            Ensembl:ENST00000429103 Uniprot:B4DQE7
        Length = 182

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 69/181 (38%), Positives = 115/181 (63%)

Query:   132 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 191
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAF 60

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCW 251
              P A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCW
Sbjct:    61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCW 120

Query:   252 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRS 311
             T  TG++L   L +EIP++E+   + P+  L I      + N    +  I   +  NL+ 
Sbjct:   121 TYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 180

Query:   312 I 312
             +
Sbjct:   181 V 181


>UNIPROTKB|F1N0W0 [details] [associations]
            symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
            of multicellular organism growth" evidence=IEA] [GO:0033558
            "protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
            regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
            GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
            GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
            EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
            Uniprot:F1N0W0
        Length = 163

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 72/159 (45%), Positives = 101/159 (63%)

Query:   211 GCFNLSIDGHA-ECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
             GC+     G   ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P 
Sbjct:     1 GCWGQRDRGRGGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPY 60

Query:   270 NEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY 328
             +EY +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D  
Sbjct:    61 SEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLL 120

Query:   329 IPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
                +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   121 T--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 156


>UNIPROTKB|F1RPM1 [details] [associations]
            symbol:LOC100625846 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
            EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
        Length = 142

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 62/142 (43%), Positives = 98/142 (69%)

Query:   132 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 191
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  +  + ++++ +V   +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAF 60

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG--GGYTKENVAR 249
              P A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GG  GGY   N AR
Sbjct:    61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTAR 120

Query:   250 CWTVETGILLDTELPNEIPENE 271
             CWT  TG++L   L +EIP++E
Sbjct:   121 CWTYLTGVILGKTLSSEIPDHE 142


>TIGR_CMR|SPO_2177 [details] [associations]
            symbol:SPO_2177 "acetoin utilization protein AcuC"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
            activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
            evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
            GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
            RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
            KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
            Uniprot:Q5LRF3
        Length = 368

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 86/231 (37%), Positives = 122/231 (52%)

Query:    39 PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 98
             PVF  ++      AGG++ AA  +         N  GG HH     A GFCY+ND VL I
Sbjct:    90 PVFAEMYRRPATAAGGSLLAAELVARG--HRVFNPGGGTHHGFADRAGGFCYLNDPVLAI 147

Query:    99 LELLKYH-ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGERE 157
             L L +   ARV Y+DID HH DGV  AF  +  V  +S H+     +P TG +++  +  
Sbjct:   148 LALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHEARR--WPFTGALED--DAG 203

Query:   158 GKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI 217
             G   A+N+P+   ++D+++  +   +I   V  + P A+VLQCGAD++A D L    LS 
Sbjct:   204 GA--ALNLPVARDLNDSAYALILDRLILPAVAGFRPDAVVLQCGADAVAEDPLSRLALSN 261

Query:   218 DGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP 268
               H + VR +      LLV GGGGY   +VAR WT     L   E+P+ +P
Sbjct:   262 CAHRDTVRALAALCPRLLVLGGGGYNPWSVARAWTGVWATLSGAEIPDRLP 312


>UNIPROTKB|E7EW22 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
            HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
            ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
            ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
        Length = 185

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 50/88 (56%), Positives = 64/88 (72%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155

Query:    92 NDLVLGILELLKYHARVLYIDIDVHHGD 119
             ND VLGIL L +   R+LY+D+D+HHGD
Sbjct:   156 NDAVLGILRLRRKFERILYVDLDLHHGD 183


>CGD|CAL0003359 [details] [associations]
            symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
            [GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
            "mating-type region heterochromatin" evidence=IEA] [GO:0031933
            "telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
            chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
            heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0036170 "filamentous growth of a population of
            unicellular organisms in response to starvation" evidence=IMP]
            [GO:1900436 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to starvation"
            evidence=IMP] [GO:0036177 "filamentous growth of a population of
            unicellular organisms in response to pH" evidence=IMP] [GO:1900743
            "positive regulation of filamentous growth of a population of
            unicellular organisms in response to pH" evidence=IMP] [GO:0071469
            "cellular response to alkalinity" evidence=IMP] [GO:0036180
            "filamentous growth of a population of unicellular organisms in
            response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
            regulation of filamentous growth of a population of unicellular
            organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
            "cellular response to biotic stimulus" evidence=IMP] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010978 "gene silencing involved in chronological cell aging"
            evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
            evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0010621 "negative
            regulation of transcription by transcription factor localization"
            evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
            telomere" evidence=IEA] [GO:0031060 "regulation of histone
            methylation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
            "negative regulation of chromatin silencing involved in replicative
            cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
            evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
            GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
            InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
            GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
            PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
            GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
            ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
            GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
            GO:GO:1900743 Uniprot:Q5A960
        Length = 833

 Score = 277 (102.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 73/250 (29%), Positives = 129/250 (51%)

Query:    35 GEDCPVFENLFEFCQIYAGGTIDAAR-----RLNNQLCDIAINWAGGLHHAKKCEASGFC 89
             G+   V  + +   ++  GGTI+A +     R+ N L   AI    G HHA+    +GFC
Sbjct:   222 GDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVKNSL---AIVRPPG-HHAEPNTPAGFC 277

Query:    90 YINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFF 144
               +++ +    +LK +     R++ +D D+HHG+G ++AFY   RV+ +S H+F +  F+
Sbjct:   278 LFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFY 337

Query:   145 PGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 201
             PGT  GD+ ++GE  G+ + IN+P +  G+ D  +   F  II  V+  + P  I++  G
Sbjct:   338 PGTKYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSG 397

Query:   202 ADSLAGDRLGCFNLSIDGHAECVRFVKKFNL-PLLVTGGGGYTKENVARCWTVETGILLD 260
              D+  GD +G  +++  G+      +K      L V   GGY  +++++     + + + 
Sbjct:   398 FDAADGDVIGACHVTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISK-----SALAVA 452

Query:   261 TELPNEIPEN 270
               L  E PEN
Sbjct:   453 KVLVGEPPEN 462

 Score = 41 (19.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query:    17 SVYFGPNHPMKPHRLYNL 34
             S Y  P HP  P R+Y +
Sbjct:   138 SEYIDP-HPEDPRRIYRI 154


>UNIPROTKB|Q5A960 [details] [associations]
            symbol:HDA1 "Likely class II histone deacetylase subunit
            Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
            [GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
            "phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
            growth of a population of unicellular organisms in response to
            starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
            population of unicellular organisms in response to pH"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
            [GO:0071469 "cellular response to alkalinity" evidence=IMP]
            [GO:1900239 "regulation of phenotypic switching" evidence=IMP]
            [GO:1900436 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to starvation"
            evidence=IMP] [GO:1900445 "positive regulation of filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
            filamentous growth of a population of unicellular organisms in
            response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
            GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
            GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
            EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
            GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
            ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
            GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
            GO:GO:1900743 Uniprot:Q5A960
        Length = 833

 Score = 277 (102.6 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 73/250 (29%), Positives = 129/250 (51%)

Query:    35 GEDCPVFENLFEFCQIYAGGTIDAAR-----RLNNQLCDIAINWAGGLHHAKKCEASGFC 89
             G+   V  + +   ++  GGTI+A +     R+ N L   AI    G HHA+    +GFC
Sbjct:   222 GDSIYVNNDSYLSAKLSCGGTIEACKAVIEGRVKNSL---AIVRPPG-HHAEPNTPAGFC 277

Query:    90 YINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFF 144
               +++ +    +LK +     R++ +D D+HHG+G ++AFY   RV+ +S H+F +  F+
Sbjct:   278 LFSNVAVAAKNMLKNYPESVRRIVIVDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFY 337

Query:   145 PGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 201
             PGT  GD+ ++GE  G+ + IN+P +  G+ D  +   F  II  V+  + P  I++  G
Sbjct:   338 PGTKYGDLNQVGEGPGEGFTINIPWRSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSG 397

Query:   202 ADSLAGDRLGCFNLSIDGHAECVRFVKKFNL-PLLVTGGGGYTKENVARCWTVETGILLD 260
              D+  GD +G  +++  G+      +K      L V   GGY  +++++     + + + 
Sbjct:   398 FDAADGDVIGACHVTPAGYGYMTHTLKGIARGKLAVILEGGYNLDSISK-----SALAVA 452

Query:   261 TELPNEIPEN 270
               L  E PEN
Sbjct:   453 KVLVGEPPEN 462

 Score = 41 (19.5 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query:    17 SVYFGPNHPMKPHRLYNL 34
             S Y  P HP  P R+Y +
Sbjct:   138 SEYIDP-HPEDPRRIYRI 154


>UNIPROTKB|E7EWI8 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
            IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
            Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
            Uniprot:E7EWI8
        Length = 128

 Score = 201 (75.8 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query:   203 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 262
             DSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA   T ET +L++  
Sbjct:    68 DSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA---TYETSLLVEEA 124

Query:   263 LPNE 266
             +  E
Sbjct:   125 ISEE 128

 Score = 103 (41.3 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
 Identities = 16/25 (64%), Positives = 21/25 (84%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRL 31
             ++YFYD DVG+ ++G  HPMKPHRL
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRL 29


>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
            symbol:hdac6 "histone deacetylase 6" species:7955
            "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
            "angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
            GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
            CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
            RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
            Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
            NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
        Length = 1081

 Score = 275 (101.9 bits), Expect = 1.1e-22, P = 1.1e-22
 Identities = 76/262 (29%), Positives = 130/262 (49%)

Query:    17 SVYFGPNHPMKPHRLYNLGEDC-PVF-ENLFEFCQIYAGGT-IDAARR-LNNQLCD-IAI 71
             S+     H MKP  L  LG++   +F  N    C + A G+  ++A+  L  Q+ + +AI
Sbjct:   509 SIIKSSEH-MKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAI 567

Query:    72 NWAGGLHHAKKCEASGFCYINDLVLGIL---ELLKYHARVLYIDIDVHHGDGVEEAFYFT 128
                 G HHA+K  A GFC+ N   L       + +   RVL +D DVHHG+G +  F   
Sbjct:   568 VRPPG-HHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEED 626

Query:   129 DRVMTVSFHKFGD-LFFPGTGDVK--EIGEREGKFYAINVPLKDG-IDDTSFTRLFKTII 184
             D V+ +S H++ D  FFP + D    ++G  +G+ Y +N+P   G + D  +   F  ++
Sbjct:   627 DSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLV 686

Query:   185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYT 243
               +   +AP  +++  G D+  GD LG F ++ +G+A     +       +L+   GGY 
Sbjct:   687 MPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYN 746

Query:   244 KENVARCWTVETGILLDTELPN 265
               +++   ++ T +LL    P+
Sbjct:   747 LTSISESMSMCTSMLLGDSPPS 768

 Score = 201 (75.8 bits), Expect = 8.8e-13, P = 8.8e-13
 Identities = 61/217 (28%), Positives = 101/217 (46%)

Query:    62 LNNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHG 118
             + +QL +  +IN   G HHA+  + +GFC  N+L +      K H   RVL +D DVHHG
Sbjct:   176 MTSQLRNGFSINRPPG-HHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHG 234

Query:   119 DGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPL-KDGIDDT 174
              G++  F     V+  S H++ D  F+P     D   +G   G+ Y IN+P  K G++  
Sbjct:   235 QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMESG 294

Query:   175 SFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL 234
              +   F+ ++  V   + P  +++  G D++ GD  G   +S +  +     +K      
Sbjct:   295 DYITAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGR 354

Query:   235 LVTG-GGGYTKENVARCWTVETGILLDTELPNEIPEN 270
             LV    GGY  ++ A         LL    P+ +P +
Sbjct:   355 LVLALEGGYNLQSTAEGVCASMRSLLGDPCPH-LPSS 390


>TAIR|locus:2095087 [details] [associations]
            symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
            mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
            flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
            GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
            ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
            EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
            OMA:QNKSVLY Uniprot:F4J8S1
        Length = 564

 Score = 271 (100.5 bits), Expect = 2.5e-22, P = 2.5e-22
 Identities = 60/195 (30%), Positives = 98/195 (50%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHAR-VLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA    A GFC  N+  +  L      A+ VL +D DVHHG+G +E F     V+ +S 
Sbjct:   276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335

Query:   137 HKF-GDLFFPGTGDVKEIGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVETYAPG 194
             H+  G  F+PGTG   E+G   G+ Y +NVP    G+ D  +   F+ ++  +   ++P 
Sbjct:   336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395

Query:   195 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 253
              +++  G D+  GD LGC +++  G++   + +       +LV   GGY   +++   T 
Sbjct:   396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATA 455

Query:   254 ETGILLDTELPNEIP 268
                +LL     NE+P
Sbjct:   456 VIKVLLGENPENELP 470


>RGD|619976 [details] [associations]
            symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
            promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISO]
            [GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
            [GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
            "transcription factor binding" evidence=ISO] [GO:0008284 "positive
            regulation of cell proliferation" evidence=ISO] [GO:0009913
            "epidermal cell differentiation" evidence=ISO] [GO:0010870
            "positive regulation of receptor biosynthetic process"
            evidence=ISO] [GO:0010977 "negative regulation of neuron projection
            development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
            evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
            [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
            evidence=ISO] [GO:0017053 "transcriptional repressor complex"
            evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
            protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
            evidence=ISO] [GO:0033558 "protein deacetylase activity"
            evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
            [GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
            to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
            drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
            evidence=ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=ISO] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
            cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
            development" evidence=ISO] [GO:0060044 "negative regulation of
            cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
            "regulation of sarcomere organization" evidence=ISO] [GO:0060789
            "hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
            development in camera-type eye" evidence=ISO] [GO:0061198
            "fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
            regulation of canonical Wnt receptor signaling pathway"
            evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
            evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
            GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
            UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
            STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
            Genevestigator:Q99PA1 Uniprot:Q99PA1
        Length = 174

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 46/114 (40%), Positives = 72/114 (63%)

Query:   254 ETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQ 313
             ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + 
Sbjct:     2 ETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLP 61

Query:   314 HAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
             HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:    62 HAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 115


>TAIR|locus:2201826 [details] [associations]
            symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
            deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
            GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
            EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
            PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
            ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
            PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
            KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
            PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
            Uniprot:Q94EJ2
        Length = 377

 Score = 251 (93.4 bits), Expect = 6.0e-20, P = 6.0e-20
 Identities = 72/235 (30%), Positives = 114/235 (48%)

Query:    35 GEDCPVFENLF------EFCQIYAGGTIDAARRL---NNQLCDIAINWAGGLHHAKKCEA 85
             GE C +    F      E   + AG T+ A + +   + ++    +   G  HH++  +A
Sbjct:    94 GERCEIAAGTFMSPGSWEAALLAAGTTLSAMQHILDCHGKIAYALVRPPG--HHSQPTQA 151

Query:    86 SGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH-KFGDL 142
              G+C++N+  L +   L   +  RV  IDIDVH+G+G  E FY +D+V+TVS H   G  
Sbjct:   152 DGYCFLNNAALAVKLALNSGSCSRVAVIDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSW 211

Query:   143 --FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 200
                 P  G + E+GE  G  Y +NVPL +G  D  +      ++   V  + P  +VL  
Sbjct:   212 GSSHPQKGSIDELGEDVGLGYNLNVPLPNGTGDRGYEYAMNELVVPAVRRFGPDMVVLVV 271

Query:   201 GADSLAGDRLGCFNLSIDGH---AECVRFVKKFNLP--LLVTGGGGYTKENVARC 250
             G DS A D  G  +L+++G+    + +R V + +    LL+   GGY     A C
Sbjct:   272 GQDSSAFDPNGRQSLTMNGYRRIGQIMRGVAEEHSHGRLLMVQEGGYHVTYAAYC 326


>UNIPROTKB|Q4K950 [details] [associations]
            symbol:aphA_2 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
            RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
            GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
            ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
            Uniprot:Q4K950
        Length = 341

 Score = 244 (91.0 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 68/225 (30%), Positives = 109/225 (48%)

Query:    38 CPVFENLFEFCQIYAGGTIDAARRL-NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 96
             CPV E+ +      A   +  A+ L + +    A+    G HHA+   A GFCY+N+  +
Sbjct:   116 CPVGESTWRAAYWSAQSAVAGAQALLDGEPAAYALCRPPG-HHARSEAAGGFCYLNNAAI 174

Query:    97 GILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT-GDVKEIGE 155
                 L   +ARV  +D D+HHG G++E FY    V+ VS H     F+PG  G  +E G 
Sbjct:   175 AAQVLRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPGVAGFAEERGA 234

Query:   156 REGKFYAINVPLKDGIDDTSF-TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
               G+ Y +N+P+  G  +  F  RL + +  + V+ +    +VL  G D    D      
Sbjct:   235 GAGEGYNLNLPMAHGASEGDFLARLEQAL--EAVKAFDAEVLVLSLGFDIYELDPQSKVA 292

Query:   215 LSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV---ARCWTVETG 256
             ++ DG A   + ++   LP L+   GGY  E++   AR +  ++G
Sbjct:   293 VTRDGFAILGQRIRSLGLPCLIVQEGGYHLESLEDNARAFFADSG 337


>UNIPROTKB|A6ND61 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
            EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
            GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
            ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
            RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
            STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
            ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
        Length = 139

 Score = 156 (60.0 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
 Identities = 28/47 (59%), Positives = 35/47 (74%)

Query:    74 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 120
             A  LH   + EASGFCY+ND VLGIL L +   R+LY+D+D+HHGDG
Sbjct:    47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG 93

 Score = 101 (40.6 bits), Expect = 3.0e-19, Sum P(2) = 3.0e-19
 Identities = 15/34 (44%), Positives = 27/34 (79%)

Query:   146 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 179
             GTGDV ++G  +G++Y++NVP++DGI D  + ++
Sbjct:    93 GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 126


>SGD|S000004966 [details] [associations]
            symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
            deacetylase complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
            evidence=IMP] [GO:0001308 "negative regulation of chromatin
            silencing involved in replicative cell aging" evidence=IGI;IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
            chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
            transcription by chromatin organization" evidence=IMP] [GO:0010621
            "negative regulation of transcription by transcription factor
            localization" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0010978 "gene silencing involved in chronological cell aging"
            evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
            GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
            Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
            eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
            OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
            PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
            RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
            DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
            PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
            KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
            GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
            GO:GO:0010621 Uniprot:P53973
        Length = 706

 Score = 250 (93.1 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
 Identities = 69/251 (27%), Positives = 128/251 (50%)

Query:    37 DCPVFEN-LFEFCQIYAGGTIDAAR-----RLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             D   F N  +   ++  GG I+A +     R+ N L    +   G  HHA+   A GFC 
Sbjct:   162 DSVYFNNDSYASARLPCGGAIEACKAVVEGRVKNSLA--VVRPPG--HHAEPQAAGGFCL 217

Query:    91 INDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFP 145
              +++ +    +LK +     R++ +D D+HHG+G +++FY  D+V+ VS H+F    ++P
Sbjct:   218 FSNVAVAAKNILKNYPESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYP 277

Query:   146 GT--GDVKEIGEREGKFYAINV--PLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 201
             GT  G   + GE +G+ +  N+  P+  G+ D  +   F+ ++  +   + P  +++  G
Sbjct:   278 GTIQGQYDQTGEGKGEGFNCNITWPV-GGVGDAEYMWAFEQVVMPMGREFKPDLVIISSG 336

Query:   202 ADSLAGDRLG-CF-NLSIDGH-AECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGIL 258
              D+  GD +G C    S  GH    ++ + + NL +++ GG  Y  + +AR       +L
Sbjct:   337 FDAADGDTIGQCHVTPSCYGHMTHMLKSLARGNLCVVLEGG--YNLDAIARSALSVAKVL 394

Query:   259 LDTELPNEIPE 269
             +  E P+E+P+
Sbjct:   395 IG-EPPDELPD 404

 Score = 39 (18.8 bits), Expect = 6.5e-19, Sum P(2) = 6.5e-19
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query:    19 YFGPNHPMKPHRLYNL 34
             Y  P HP  P R+Y +
Sbjct:    79 YIDP-HPEDPRRIYRI 93


>UNIPROTKB|F1NES1 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
            Uniprot:F1NES1
        Length = 1054

 Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   772 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 830

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   831 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 890

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   891 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 928


>UNIPROTKB|F1NP26 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
            Uniprot:F1NP26
        Length = 1062

 Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   780 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 838

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   839 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 898

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   899 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 936


>UNIPROTKB|F1NWX8 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
            of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
            of cardiac muscle contraction by calcium ion signaling"
            evidence=IEA] [GO:0014894 "response to denervation involved in
            regulation of muscle adaptation" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
            binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
            evidence=IEA] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
            "regulation of protein binding" evidence=IEA] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0070491 "repressing transcription factor binding" evidence=IEA]
            [GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
            GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
            GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
            GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
            GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
            GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
            GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
        Length = 1071

 Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   789 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 847

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   848 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 907

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   908 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 945


>UNIPROTKB|C9J8F0 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
            HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
            ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
            Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
            Bgee:C9J8F0 Uniprot:C9J8F0
        Length = 132

 Score = 227 (85.0 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 42/76 (55%), Positives = 52/76 (68%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct:    57 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 116

Query:    92 NDLVLGILELLKYHAR 107
             ND VLGIL L +   R
Sbjct:   117 NDAVLGILRLRRKFER 132


>UNIPROTKB|P83038 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0030183 "B cell differentiation"
            evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0045843 "negative regulation of striated muscle tissue
            development" evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
            "chromatin organization" evidence=TAS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
            GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
            GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
            UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
            GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
            ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
            Uniprot:P83038
        Length = 1080

 Score = 251 (93.4 bits), Expect = 1.2e-18, P = 1.2e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   798 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 856

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   857 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 916

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   917 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 954


>UNIPROTKB|F1MYR0 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
            "response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045820 "negative regulation of glycolysis" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043393 "regulation of protein binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0030955 "potassium ion binding"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0014894 "response to denervation involved in regulation of
            muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
            muscle contraction by calcium ion signaling" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
            GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
            EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
            EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
            EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
            EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
            EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
            EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
            Uniprot:F1MYR0
        Length = 1084

 Score = 249 (92.7 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 53/162 (32%), Positives = 90/162 (55%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     ++ L +D DVHHG+G ++AFY   RV+ +
Sbjct:   802 HHAEESTPMGFCYFNSVAIAA-KLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYI 860

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   861 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 958


>UNIPROTKB|I3LM52 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
            "response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045820 "negative regulation of glycolysis" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043393 "regulation of protein binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0030955 "potassium ion binding"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0014894 "response to denervation involved in regulation of
            muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
            muscle contraction by calcium ion signaling" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
            GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
            Uniprot:I3LM52
        Length = 1052

 Score = 248 (92.4 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 52/161 (32%), Positives = 89/161 (55%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++    GFCY N + +   +L+   + ++ L +D DVHHG+G ++AFY    V+ VS
Sbjct:   770 HHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVS 829

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +   
Sbjct:   830 LHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANE 889

Query:   191 YAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
             +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   890 FAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 926


>UNIPROTKB|F6X8E7 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
            Uniprot:F6X8E7
        Length = 1068

 Score = 246 (91.7 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 75/291 (25%), Positives = 137/291 (47%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   784 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 843

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+T+++ V + 
Sbjct:   844 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKE 903

Query:   191 YAPGAIVLQCGADSLAGDR--LGCFNLSID--GH-AECVRFVKKFNLPLLVTGGGGYTKE 245
             + P  +++  G D+L G    LG + ++    GH  + +  +   ++ L + GG   T  
Sbjct:   904 FDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLMTLADGHVVLALEGGHDLT-- 961

Query:   246 NVARCWTVETGILLDTELPNEI-PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
               A C   E  +  +  L NE+ P  E I +  P  +  I    I  + SK Y  +++M 
Sbjct:   962 --AICDASEACV--NALLGNELEPLAEDILHQTPNMNAVISLQKIIEIQSK-YWKSVRMV 1016

Query:   305 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRD 355
              +   R    A +   +E      +     D + P    D  T  + ++ +
Sbjct:  1017 AVP--RGCALAGTQLQEETETVSALASLTVDVEQPFASEDSRTAGEPMEEE 1065


>UNIPROTKB|F5GX36 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
            "transcription corepressor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
            denervation involved in regulation of muscle adaptation"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
            [GO:0033558 "protein deacetylase activity" evidence=IEA]
            [GO:0042493 "response to drug" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
            GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
            GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
            GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
            GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
            ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
            ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
        Length = 668

 Score = 242 (90.2 bits), Expect = 7.1e-18, P = 7.1e-18
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   386 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 444

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   445 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 504

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A C  ++ K
Sbjct:   505 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----ARCFGYLTK 542


>RGD|619979 [details] [associations]
            symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
            "core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
            development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
            [GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
            remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
            of myotube differentiation" evidence=IEA;ISO] [GO:0010882
            "regulation of cardiac muscle contraction by calcium ion signaling"
            evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
            regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
            "histone deacetylation" evidence=ISO;IMP] [GO:0017053
            "transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
            "protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
            evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
            "potassium ion binding" evidence=IEA;ISO] [GO:0031594
            "neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
            evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
            regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
            "protein deacetylase activity" evidence=ISO] [GO:0033613
            "activating transcription factor binding" evidence=IEA;ISO]
            [GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
            [GO:0042493 "response to drug" evidence=IDA] [GO:0042641
            "actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
            binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
            evidence=IDA] [GO:0043393 "regulation of protein binding"
            evidence=IEA;ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
            of skeletal muscle fiber development" evidence=ISO] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
            striated muscle cell differentiation" evidence=ISO] [GO:0070491
            "repressing transcription factor binding" evidence=IEA;ISO]
            [GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
            "histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
            GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
            GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
            GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
            GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
            EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
            IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
            ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
            PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
            GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
            BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
            Genevestigator:Q99P99 Uniprot:Q99P99
        Length = 1077

 Score = 244 (91.0 bits), Expect = 9.2e-18, P = 9.2e-18
 Identities = 52/162 (32%), Positives = 90/162 (55%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   795 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 853

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   854 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 913

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   914 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 951


>UNIPROTKB|F1PRU6 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
            EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
            Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
        Length = 1084

 Score = 243 (90.6 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     ++ L +D DVHHG+G ++AFY    V+ +
Sbjct:   801 HHAEESTPMGFCYFNSVAIAA-KLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYI 859

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   860 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 919

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   920 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 957


>UNIPROTKB|P56524 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
            [GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
            band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
            "B cell activation" evidence=TAS] [GO:0030183 "B cell
            differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
            evidence=TAS] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA;IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IMP] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
            "regulation of protein binding" evidence=IMP] [GO:0030955
            "potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
            "response to denervation involved in regulation of muscle
            adaptation" evidence=ISS] [GO:0045820 "negative regulation of
            glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0070491 "repressing transcription
            factor binding" evidence=IPI] [GO:0070932 "histone H3
            deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
            evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IMP] [GO:0033613 "activating transcription
            factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
            hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
            PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
            GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
            GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
            GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
            Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
            GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
            Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
            InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
            GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
            Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
            EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
            UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
            PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
            PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
            PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
            IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
            DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
            GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
            HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
            neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
            OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
            ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
            NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
            Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
            GO:GO:0010882 Uniprot:P56524
        Length = 1084

 Score = 242 (90.2 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   802 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 860

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   861 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A C  ++ K
Sbjct:   921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----ARCFGYLTK 958


>MGI|MGI:3036234 [details] [associations]
            symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0002076 "osteoblast development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
            "transcription corepressor activity" evidence=IGI] [GO:0004407
            "histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
            [GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
            evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=ISO;IPI]
            [GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
            regulation of cell proliferation" evidence=ISO] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP;IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
            denervation involved in regulation of muscle adaptation"
            evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=ISO] [GO:0019901 "protein kinase
            binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
            [GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
            binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
            activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
            factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0034983
            "peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
            to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
            [GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
            "protein complex" evidence=ISO] [GO:0043393 "regulation of protein
            binding" evidence=ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0045668 "negative regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045820 "negative regulation of
            glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IGI] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051153 "regulation of striated muscle cell
            differentiation" evidence=IGI] [GO:0070491 "repressing
            transcription factor binding" evidence=ISO] [GO:0070555 "response
            to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
            deacetylation" evidence=IEA;ISO] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
            GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
            GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
            GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
            GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
            GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
            CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
            GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
            EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
            UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
            DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
            PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
            KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
            NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
            Uniprot:Q6NZM9
        Length = 1076

 Score = 239 (89.2 bits), Expect = 3.7e-17, P = 3.7e-17
 Identities = 51/162 (31%), Positives = 90/162 (55%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   794 HHAEESTPMGFCYFNSVAVAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 852

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G++    D  +   F+T++  +  
Sbjct:   853 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIAN 912

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 229
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   913 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 950


>POMBASE|SPBC800.03 [details] [associations]
            symbol:clr3 "histone deacetylase (class II) Clr3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
            heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
            [GO:0030466 "chromatin silencing at silent mating-type cassette"
            evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
            evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
            [GO:0031060 "regulation of histone methylation" evidence=IMP]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
            [GO:0031934 "mating-type region heterochromatin" evidence=IDA]
            [GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
            "maintenance of chromatin silencing at silent mating-type cassette"
            evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
            "cellular response to cadmium ion" evidence=IMP] [GO:0071585
            "detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
            GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
            GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
            GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
            GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
            GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
            RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
            STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
            KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
            OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
            InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
            PRINTS:PR01270 Uniprot:P56523
        Length = 687

 Score = 236 (88.1 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 74/284 (26%), Positives = 131/284 (46%)

Query:    26 MKPHRLYNLGE--DCPVFENLFEFC-QIYAGGTIDAARRL-NNQLCD-IAINWAGGLHHA 80
             M    L NL +  D   + N   FC ++  G  I+    +   Q+ +  A+    G HHA
Sbjct:   138 MSHEDLANLEKISDSLYYNNESAFCARLACGSAIETCTAVVTGQVKNAFAVVRPPG-HHA 196

Query:    81 KKCEASGFCYINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             +  +  GFC  N++ +    +L+       RVL +D D+HHG+G + AFY    V+ VS 
Sbjct:   197 EPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDWDIHHGNGTQMAFYDDPNVLYVSL 256

Query:   137 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVETYA 192
             H++ +  F+PGT  G  +  GE  G    +N+P    G+ D  +   F+ ++  V   + 
Sbjct:   257 HRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCAGMGDGDYIYAFQRVVMPVAYEFD 316

Query:   193 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCW 251
             P  +++ CG D+ AGD +G F L+   +A   + +    +  + ++  GGY  ++++   
Sbjct:   317 PDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMGLADGKVFISLEGGYNLDSISTSA 376

Query:   252 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSK 295
                   LL   +P   P   +  Y  P+    I   H+  + S+
Sbjct:   377 LAVAQSLLG--IP---PGRLHTTYACPQAVATI--NHVTKIQSQ 413


>UNIPROTKB|F1LSN5 [details] [associations]
            symbol:F1LSN5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 IPI:IPI01016416
            Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
        Length = 932

 Score = 237 (88.5 bits), Expect = 5.1e-17, P = 5.1e-17
 Identities = 58/192 (30%), Positives = 100/192 (52%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L ++   +++L +D DV
Sbjct:   634 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDV 689

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY   RV+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   690 HHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPP 749

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 228
               D  +   F+ ++  +   +AP  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   750 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMT 805

Query:   229 KFNLPLLVTGGG 240
             +    L+   GG
Sbjct:   806 Q---QLMSLAGG 814


>RGD|1310748 [details] [associations]
            symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
            binding" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
            "transcription factor complex" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0007507 "heart development"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
            to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
            activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=ISO] [GO:0035097 "histone methyltransferase complex"
            evidence=ISO] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
            muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
            striated muscle cell differentiation" evidence=ISO] [GO:0070491
            "repressing transcription factor binding" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
            deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
            cell migration involved in sprouting angiogenesis" evidence=ISO]
            Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
            Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
        Length = 484

 Score = 231 (86.4 bits), Expect = 7.1e-17, P = 7.1e-17
 Identities = 72/261 (27%), Positives = 126/261 (48%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   210 HHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 269

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G   E+G   G+ Y +N+    G+D    D  +   F+T++  V   
Sbjct:   270 LHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVARE 329

Query:   191 YAPGAIVLQCGADSLAGDR--LGCFNLSID----GH-AECVRFVKKFNLPLLVTGGGGYT 243
             + P  +++  G D+L G    LG + ++      GH  + +  +    + L + GG   T
Sbjct:   330 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQLMTLANGRVALALEGGHDLT 389

Query:   244 KENVARCWTVETGI--LLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTI 301
                 A C   E  I  LL  E P  + E+   +      +  +    IE + SK Y  +I
Sbjct:   390 ----AICDASEACINALLGNE-PGSLEEDVLHQSVNTNAAASLQKT-IE-IQSK-YWKSI 441

Query:   302 KMQVLENLRSIQHAPSVQMQE 322
             KM  +    ++   P+ Q+QE
Sbjct:   442 KMVAVARGCAL---PASQLQE 459


>UNIPROTKB|Q3Z9M2 [details] [associations]
            symbol:DET0330 "Histone deacetylase family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
            ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
            KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
            BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
        Length = 341

 Score = 225 (84.3 bits), Expect = 7.6e-17, P = 7.6e-17
 Identities = 73/242 (30%), Positives = 108/242 (44%)

Query:    34 LGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCDIAINWAGGLHHAKKCEASGFCYIN 92
             L +D  +  + +E      GG ++   + L+ +L    +      HHA    + GFC  N
Sbjct:    78 LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFN 137

Query:    93 DLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             ++ LG L  L  H   RV  +D DVHHG+G++       RV  +S H+     FP TGD 
Sbjct:   138 NVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHH--FPFTGDS 195

Query:   151 KEIGEREGKFYAI-NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
              E    +G F  I N+PL  G  D+ + ++F  +I   +   +P  I++  G D+   D 
Sbjct:   196 CE----DGPFQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADD 251

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVARCWTVETGILLDTE 262
             +G   LS  G A   R +KK      V GG       GGY    +A        +LLD  
Sbjct:   252 MGEMCLSQQGFAGITRALKKTADE--VCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEA 309

Query:   263 LP 264
             LP
Sbjct:   310 LP 311


>TIGR_CMR|DET_0330 [details] [associations]
            symbol:DET_0330 "histone deacetylase family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
            ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
            KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
            BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
        Length = 341

 Score = 225 (84.3 bits), Expect = 7.6e-17, P = 7.6e-17
 Identities = 73/242 (30%), Positives = 108/242 (44%)

Query:    34 LGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCDIAINWAGGLHHAKKCEASGFCYIN 92
             L +D  +  + +E      GG ++   + L+ +L    +      HHA    + GFC  N
Sbjct:    78 LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEASMGFCIFN 137

Query:    93 DLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 150
             ++ LG L  L  H   RV  +D DVHHG+G++       RV  +S H+     FP TGD 
Sbjct:   138 NVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHH--FPFTGDS 195

Query:   151 KEIGEREGKFYAI-NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
              E    +G F  I N+PL  G  D+ + ++F  +I   +   +P  I++  G D+   D 
Sbjct:   196 CE----DGPFQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAGYDAHFADD 251

Query:   210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVARCWTVETGILLDTE 262
             +G   LS  G A   R +KK      V GG       GGY    +A        +LLD  
Sbjct:   252 MGEMCLSQQGFAGITRALKKTADE--VCGGKMVFSLEGGYHYLGLAESVGASLAVLLDEA 309

Query:   263 LP 264
             LP
Sbjct:   310 LP 311


>UNIPROTKB|Q9UKV0 [details] [associations]
            symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
            sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
            "B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
            response" evidence=TAS] [GO:0042113 "B cell activation"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
            "histone methyltransferase complex" evidence=ISS] [GO:0048742
            "regulation of skeletal muscle fiber development" evidence=ISS]
            [GO:0051153 "regulation of striated muscle cell differentiation"
            evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
            [GO:0008134 "transcription factor binding" evidence=IDA;IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
            pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
            "histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
            transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
            activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
            evidence=IDA;IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
            deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
            evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
            [GO:0003714 "transcription corepressor activity" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IDA]
            [GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
            GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
            GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
            GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
            GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
            GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
            EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
            EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
            EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
            EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
            EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
            IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
            IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
            RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
            RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
            RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
            UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
            IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
            PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
            Ensembl:ENST00000405010 Ensembl:ENST00000406451
            Ensembl:ENST00000417496 Ensembl:ENST00000432645
            Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
            UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
            UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
            HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
            InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
            ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
            Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
            GermOnline:ENSG00000048052 Uniprot:Q9UKV0
        Length = 1011

 Score = 236 (88.1 bits), Expect = 7.6e-17, P = 7.6e-17
 Identities = 67/232 (28%), Positives = 115/232 (49%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 841

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+TI+  V + 
Sbjct:   842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKE 901

Query:   191 YAPGAIVLQCGADSLAGDR--LGCFNLSID--GH-AECVRFVKKFNLPLLVTGGGGYTKE 245
             + P  +++  G D+L G    LG + ++    GH  + +  +    + L + GG   T  
Sbjct:   902 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLT-- 959

Query:   246 NVARCWTVETGILLDTELPNEI-PENEYIKYFAPECSLRIPNGHIENLNSKS 296
               A C   E  +  +  L NE+ P  E I + +P  +  I    I  + S S
Sbjct:   960 --AICDASEACV--NALLGNELEPLAEDILHQSPNMNAVISLQKIIEIQSMS 1007


>TAIR|locus:2159461 [details] [associations]
            symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
            "histone acetyltransferase activity" evidence=ISS] [GO:0006338
            "chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
            epidermal cell differentiation" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
            differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
            GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
            IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
            ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
            EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
            TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
            ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
            Uniprot:Q8LRK8
        Length = 682

 Score = 233 (87.1 bits), Expect = 9.1e-17, P = 9.1e-17
 Identities = 65/227 (28%), Positives = 111/227 (48%)

Query:    46 EFCQIYAGGTIDAARRL-NNQL-CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK 103
             E   + AG  +  A ++   +L C  AI    G HHA+  EA GFC  N++ +    LL 
Sbjct:   157 EAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLN 215

Query:   104 YHA-----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF--GDLF-FPGTGDVKEIGE 155
                     ++L +D D+HHG+G ++ F+   RV+  S H+   G  + F   GD   +GE
Sbjct:   216 ERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGE 275

Query:   156 REGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
               G+ + INVP + G   D  +  ++  I+  V + + P  I+L  G D+  GD LG   
Sbjct:   276 GPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCC 335

Query:   215 LSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVARCWTVETGILLD 260
             ++  G++  ++ + +F    +V    GGY  E++ +       +LL+
Sbjct:   336 VTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382


>UNIPROTKB|Q4KBB7 [details] [associations]
            symbol:PFL_3361 "Histone deacetylase family protein"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
            GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
            STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
            OMA:PGSYEIA ProtClustDB:CLSK868223
            BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
        Length = 377

 Score = 225 (84.3 bits), Expect = 1.5e-16, P = 1.5e-16
 Identities = 70/255 (27%), Positives = 115/255 (45%)

Query:    33 NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL-HHAKKCEASGFCYI 91
             +LG++ PV    +E  Q+ AG  + A   + +   D A + +    HH  + +A GFC++
Sbjct:   101 HLGDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFL 160

Query:    92 NDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
              ++ + I      H   +V  ID DVHHG+G +  F     V+T+S H+ G  F PG G 
Sbjct:   161 ANIAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQDG-CFPPGYGG 219

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
              ++ G   G    IN+PL  G    ++    + I+   +E + P  I++ CG D+ A D 
Sbjct:   220 EQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVDP 279

Query:   210 LGCFNLSIDGHAECVRFVKKF--NL---PLLVTGGGGYTKENVARCWTVETGILLDTELP 264
             L    L  D   E  + +K     L    L++   GGY++  V  C       L      
Sbjct:   280 LARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSGIRTA 339

Query:   265 NEIPENEYIKYFAPE 279
                P  E+++   P+
Sbjct:   340 VADPMLEFVRLQQPK 354


>UNIPROTKB|F1S1J4 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090051 "negative regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
            GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
            GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
            GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
            GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
            Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
        Length = 662

 Score = 230 (86.0 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   372 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 431

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   432 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 491

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   492 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 536


>UNIPROTKB|E1C7C0 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0032869 "cellular response to
            insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
            complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] [GO:0070491 "repressing transcription
            factor binding" evidence=IEA] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
            GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
            GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
            GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
            Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
            EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
            EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
            Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
        Length = 1069

 Score = 232 (86.7 bits), Expect = 2.4e-16, P = 2.4e-16
 Identities = 69/236 (29%), Positives = 118/236 (50%)

Query:    48 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL-KYH- 105
             C I     + A+R L N     A+    G HHA++  A GFC+ N + +    L  K + 
Sbjct:   758 CVIELAARV-ASRELKN---GFAVVRPPG-HHAEESTAMGFCFFNSIAITAKYLRDKLNI 812

Query:   106 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAIN 164
              ++L +D+DVHHG+G ++AFY    ++ VS H++ +  FFPG+G   E+G   G+ + IN
Sbjct:   813 GKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGFNIN 872

Query:   165 VPLKDGID----DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSID 218
             +    G+D    D  +   F+T+I      + P  +++  G D++ G    LG + ++  
Sbjct:   873 IAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAK 932

Query:   219 --GHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGI--LLDTELPNEIPEN 270
               GH    + +K  +  +++   GG+  +  A C   E  I  LL  EL   +PE+
Sbjct:   933 CFGHLT-KQLLKLADGRVVLALEGGH--DLTAICDASEACINALLGNEL-EPLPED 984


>MGI|MGI:1333784 [details] [associations]
            symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=IMP] [GO:0001085 "RNA
            polymerase II transcription factor binding" evidence=IPI]
            [GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
            "transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
            "histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
            "protein kinase C binding" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
            "heart development" evidence=IGI] [GO:0008134 "transcription factor
            binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
            differentiation" evidence=IDA] [GO:0010832 "negative regulation of
            myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016575 "histone deacetylation"
            evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IPI] [GO:0030183 "B cell differentiation"
            evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
            "response to drug" evidence=ISO] [GO:0043234 "protein complex"
            evidence=ISO] [GO:0043393 "regulation of protein binding"
            evidence=ISO] [GO:0045668 "negative regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045843 "negative regulation of
            striated muscle tissue development" evidence=TAS] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
            histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
            fiber development" evidence=IGI] [GO:0051091 "positive regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051153 "regulation of striated muscle cell
            differentiation" evidence=IGI] [GO:0061333 "renal tubule
            morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
            factor binding" evidence=ISO] [GO:0071498 "cellular response to
            fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
            of cell migration involved in sprouting angiogenesis" evidence=ISO]
            [GO:2000179 "positive regulation of neural precursor cell
            proliferation" evidence=IMP] [GO:2000648 "positive regulation of
            stem cell proliferation" evidence=IMP] InterPro:IPR017320
            PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
            GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
            GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
            GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
            GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
            GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
            IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
            SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
            PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
            ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
            GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
        Length = 1113

 Score = 232 (86.7 bits), Expect = 2.6e-16, P = 2.6e-16
 Identities = 50/171 (29%), Positives = 91/171 (53%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   823 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 882

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  + + 
Sbjct:   883 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQE 942

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   943 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 987


>UNIPROTKB|F1LQG9 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
            Uniprot:F1LQG9
        Length = 826

 Score = 230 (86.0 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   536 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 595

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   596 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 655

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   656 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 700


>UNIPROTKB|F1LM64 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0016604
            "nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
            evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0070491 "repressing transcription factor binding" evidence=IEA]
            [GO:0090051 "negative regulation of cell migration involved in
            sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
            GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
            GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
            GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
            GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
            Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
        Length = 908

 Score = 230 (86.0 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 737

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   738 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 782


>UNIPROTKB|F1LSL9 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
            Uniprot:F1LSL9
        Length = 908

 Score = 230 (86.0 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 737

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   738 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 782


>UNIPROTKB|Q80ZH1 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:10029
            "Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
            myotube differentiation" evidence=ISS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
            HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
            EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
            SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
        Length = 1111

 Score = 231 (86.4 bits), Expect = 3.3e-16, P = 3.3e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   821 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 880

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   881 LHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 940

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   941 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 985


>MGI|MGI:1891835 [details] [associations]
            symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
            evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0003714 "transcription corepressor activity" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=TAS]
            [GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0008134
            "transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
            [GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
            interleukin-2 production" evidence=ISO] [GO:0033613 "activating
            transcription factor binding" evidence=ISO] [GO:0034739 "histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
            "B cell activation" evidence=TAS] [GO:0045668 "negative regulation
            of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
            regulation of striated muscle tissue development" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
            evidence=ISO] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=ISO]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
            GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
            GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
            GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
            ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
            EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
            IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
            IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
            RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
            RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
            SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
            STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
            Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
            Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
            Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
            UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
            UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
            ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
            CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
            GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
        Length = 938

 Score = 230 (86.0 bits), Expect = 3.5e-16, P = 3.5e-16
 Identities = 52/168 (30%), Positives = 89/168 (52%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L ++   +++L +D DV
Sbjct:   640 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDV 695

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   696 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPP 755

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 216
               D  +   F+ ++  +   +AP  +++  G D+  G    LG +++S
Sbjct:   756 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVS 803


>UNIPROTKB|Q9UQL6 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
            sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0016604 "nuclear body"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
            "chromatin organization" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
            evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
            [GO:0010830 "regulation of myotube differentiation" evidence=ISS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
            remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
            evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0070491 "repressing transcription factor binding" evidence=IPI]
            [GO:0004407 "histone deacetylase activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
            protein binding" evidence=IMP] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
            response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
            Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
            GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
            GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
            GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
            GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
            GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
            InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
            EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
            EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
            IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
            RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
            SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
            STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
            Ensembl:ENST00000225983 Ensembl:ENST00000336057
            Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
            UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
            H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
            MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
            OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
            ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
            CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
            GO:GO:0090051 Uniprot:Q9UQL6
        Length = 1122

 Score = 230 (86.0 bits), Expect = 4.5e-16, P = 4.5e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 951

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   952 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 996


>UNIPROTKB|F1MNA5 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090051 "negative regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
            GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
            GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
            GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
            EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
            Uniprot:F1MNA5
        Length = 1125

 Score = 230 (86.0 bits), Expect = 4.5e-16, P = 4.5e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   835 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 894

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   895 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 954

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   955 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 999


>TIGR_CMR|CHY_0263 [details] [associations]
            symbol:CHY_0263 "histone deacetylase domain protein"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
            ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
            KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
            ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
            Uniprot:Q3AFE9
        Length = 433

 Score = 223 (83.6 bits), Expect = 4.6e-16, P = 4.6e-16
 Identities = 62/202 (30%), Positives = 95/202 (47%)

Query:    50 IYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEAS--GFCYINDLVLGI--LELLK 103
             I AG  I+ A R L  ++ +  A+    G HHA +      GFC IN++ + +  L  +K
Sbjct:    78 IAAGSCIELAERILAGEVKNGFALVRPPG-HHATRTVYGNRGFCNINNVAITVDYLRWVK 136

Query:   104 YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 163
                ++  ID DVHHGDG ++ FY    V+ +S H+ G   +PGTG + E G        I
Sbjct:   137 GVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAYGTTI 196

Query:   164 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 223
             N+PL  G  D     L +  +  ++E + P  I+   G D+   D L    ++  G+   
Sbjct:   197 NLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYGRI 256

Query:   224 VRFVKKFNLPLLVTGGGGYTKE 245
                +K    P L    GGY+ E
Sbjct:   257 TELIK----PDLAVLEGGYSIE 274


>UNIPROTKB|J9P9N5 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
            Uniprot:J9P9N5
        Length = 1090

 Score = 229 (85.7 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   800 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 859

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   860 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 919

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   920 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 964


>UNIPROTKB|F1P6I3 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
            Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
        Length = 1117

 Score = 229 (85.7 bits), Expect = 5.8e-16, P = 5.8e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   827 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 886

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   887 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 946

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   947 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 991


>UNIPROTKB|Q5LQF5 [details] [associations]
            symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
            KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
            ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
        Length = 371

 Score = 219 (82.2 bits), Expect = 7.5e-16, P = 7.5e-16
 Identities = 72/224 (32%), Positives = 100/224 (44%)

Query:    35 GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA-INWAGGLHHAKKCEASGFCYIND 93
             GE  P      E  ++  GG I A   +     + A +      HHA    A GFC + +
Sbjct:   103 GELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLAN 162

Query:    94 LVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
               LGI  + K +   R+  +D DVHHG+G E  F     V+T+S H+  D  FP   D  
Sbjct:   163 AALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ--DNLFPL--DSG 218

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
              IG +      INVPL  G    ++   F+ I+   ++ +AP  IVL CG D+ A D LG
Sbjct:   219 GIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLG 278

Query:   212 CFNLSIDGHAECVRFV-----KKFNLPLLVTGGGGYTKENVARC 250
                LS +      R V     K     ++VT  GGY+   V  C
Sbjct:   279 VCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYC 322


>TIGR_CMR|SPO_2535 [details] [associations]
            symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
            KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
            ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
        Length = 371

 Score = 219 (82.2 bits), Expect = 7.5e-16, P = 7.5e-16
 Identities = 72/224 (32%), Positives = 100/224 (44%)

Query:    35 GEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA-INWAGGLHHAKKCEASGFCYIND 93
             GE  P      E  ++  GG I A   +     + A +      HHA    A GFC + +
Sbjct:   103 GELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDLAMGFCLLAN 162

Query:    94 LVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
               LGI  + K +   R+  +D DVHHG+G E  F     V+T+S H+  D  FP   D  
Sbjct:   163 AALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ--DNLFPL--DSG 218

Query:   152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
              IG +      INVPL  G    ++   F+ I+   ++ +AP  IVL CG D+ A D LG
Sbjct:   219 GIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGYDASAVDPLG 278

Query:   212 CFNLSIDGHAECVRFV-----KKFNLPLLVTGGGGYTKENVARC 250
                LS +      R V     K     ++VT  GGY+   V  C
Sbjct:   279 VCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYC 322


>UNIPROTKB|Q5R902 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
            abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
            evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
            ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
            Uniprot:Q5R902
        Length = 1122

 Score = 228 (85.3 bits), Expect = 7.6e-16, P = 7.6e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:    78 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 190
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHE 951

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 240
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   952 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 996


>WB|WBGene00001837 [details] [associations]
            symbol:hda-4 species:6239 "Caenorhabditis elegans"
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
            regulation of multicellular organism growth" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            [GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
            "apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
            damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
            kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
            "histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
            binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
            GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
            GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
            GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
            RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
            ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
            PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
            KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
            WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
            NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
        Length = 869

 Score = 226 (84.6 bits), Expect = 9.0e-16, P = 9.0e-16
 Identities = 54/181 (29%), Positives = 98/181 (54%)

Query:    78 HHAKKCEASGFCYINDLVLGILEL-LKYHA---RVLYIDIDVHHGDGVEEAFYFTDRVMT 133
             HHA+  +A GFC+ N++ + +  L  KY A   ++  ID DVHHG+G + +F     V+ 
Sbjct:   607 HHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLY 666

Query:   134 VSFHKF--GDLFFPGTGDVKEIGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVET 190
             +S H+   G+ FFPGTG V E+G+ + K   +NVP   D + D  +   ++T+I  V+ +
Sbjct:   667 MSLHRHDKGN-FFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMAS 725

Query:   191 YAPGAIVLQCGADSLAG--DRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENV 247
             + P  I++  G D+  G  + LG + ++ +      + +  +    +V    GGY  +++
Sbjct:   726 FCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSI 785

Query:   248 A 248
             +
Sbjct:   786 S 786


>UNIPROTKB|F1N616 [details] [associations]
            symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
            protein binding" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
            "activating transcription factor binding" evidence=IEA] [GO:0032703
            "negative regulation of interleukin-2 production" evidence=IEA]
            [GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
            GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
            GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
            GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
            OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
            UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
            KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
        Length = 988

 Score = 226 (84.6 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   689 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDV 744

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   745 HHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 804

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 228
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   805 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVS----AKCFGYMT 860

Query:   229 KFNLPLLVTGGG 240
             +    L+   GG
Sbjct:   861 Q---QLMSLAGG 869


>UNIPROTKB|H9KZE7 [details] [associations]
            symbol:H9KZE7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
            junction assembly" evidence=IEA] [GO:0032703 "negative regulation
            of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
            transcription factor binding" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=IEA] [GO:0071889
            "14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
            EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
            Uniprot:H9KZE7
        Length = 951

 Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 56/192 (29%), Positives = 97/192 (50%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   652 ASRELKN---GFAVVRPPG-HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDV 707

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G   E+G   G+ + +N+    G+D  
Sbjct:   708 HHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNIAWTGGLDPP 767

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 228
               D  +   F+T++  +   ++P  +++  G D+  G    LG + +S    A+C  ++ 
Sbjct:   768 MGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVS----AKCFGYMT 823

Query:   229 KFNLPLLVTGGG 240
             K    L+   GG
Sbjct:   824 K---QLMSLAGG 832


>UNIPROTKB|Q8WUI4 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
            specific)" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
            kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
            "activating transcription factor binding" evidence=IPI] [GO:0007219
            "Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IMP] [GO:0070491 "repressing transcription factor binding"
            evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
            production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
            GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
            GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
            Pathway_Interaction_DB:ar_tf_pathway
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
            GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
            BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
            EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
            EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
            EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
            EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
            IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
            IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
            IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
            RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
            PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
            SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
            STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
            PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
            Ensembl:ENST00000354334 Ensembl:ENST00000427332
            Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
            UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
            GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
            HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
            InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
            BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
            EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
            PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
            Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
        Length = 952

 Score = 225 (84.3 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 51/168 (30%), Positives = 88/168 (52%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   653 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDV 708

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   709 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 768

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 216
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   769 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 816


>UNIPROTKB|Q604Q2 [details] [associations]
            symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
            protein" species:243233 "Methylococcus capsulatus str. Bath"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
            ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
            PATRIC:22608838 Uniprot:Q604Q2
        Length = 310

 Score = 212 (79.7 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 56/197 (28%), Positives = 93/197 (47%)

Query:    60 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHH 117
             +R  N  C  A+   G  HHA+   A GFC  N++ +     L  H   R+  +D DVHH
Sbjct:   110 KRARNAFC--AVRPPG--HHAEPDAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHH 165

Query:   118 GDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFT 177
             G+G + AF    +V+ VS H++   ++PGTG  +E G   G    +N+PL  G D  ++ 
Sbjct:   166 GNGTQAAFRRNPQVLYVSTHQYP--WYPGTGSAEETGV--GNL--VNIPLPAGTDSAAYR 219

Query:   178 RLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH----AECVRFVKKFNLP 233
                       ++ + P  +++  G D+   D L    L+ D +    AE ++   + +  
Sbjct:   220 EAVTATALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDDYGWITAELMKLADRHSGG 279

Query:   234 LLVTG-GGGYTKENVAR 249
              +V+   GGY  E + R
Sbjct:   280 RIVSALEGGYALEALGR 296


>UNIPROTKB|J3KPH8 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
            ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
        Length = 1014

 Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 51/168 (30%), Positives = 88/168 (52%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   709 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDV 764

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   765 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 824

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 216
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   825 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 872


>UNIPROTKB|F1PK81 [details] [associations]
            symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090050 "positive regulation of cell
            migration involved in sprouting angiogenesis" evidence=IEA]
            [GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=IEA] [GO:0045668
            "negative regulation of osteoblast differentiation" evidence=IEA]
            [GO:0033613 "activating transcription factor binding" evidence=IEA]
            [GO:0032703 "negative regulation of interleukin-2 production"
            evidence=IEA] [GO:0007043 "cell-cell junction assembly"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
            "protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
            GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
            GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
            Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
        Length = 951

 Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query:    58 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 115
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   652 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDV 707

Query:   116 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 172
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   708 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 767

Query:   173 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 228
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   768 MGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMT 823

Query:   229 KFNLPLLVTGGG 240
             +    L+   GG
Sbjct:   824 Q---QLMSLAGG 832


>UNIPROTKB|Q20296 [details] [associations]
            symbol:hda-6 "Histone deacetylase 6" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
            RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
            ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
            PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
            KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
            WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
            NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
        Length = 955

 Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 79/304 (25%), Positives = 129/304 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S 
Sbjct:   145 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 204

Query:   137 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 192
             H+    LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + 
Sbjct:   205 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 264

Query:   193 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NV 247
             P  +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V
Sbjct:   265 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 324

Query:   248 ARCWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQV 305
              RC  V  G      EL NE P+   +       S LR      +   S++ L   +  +
Sbjct:   325 QRCVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPI 383

Query:   306 LENLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEG 361
             +       + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ 
Sbjct:   384 VNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDL 441

Query:   362 DNDN 365
             + DN
Sbjct:   442 EEDN 445

 Score = 207 (77.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   560 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 619

Query:   136 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 189
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   620 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 677

Query:   190 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 248
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   678 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 737

Query:   249 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 308
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   738 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 791

Query:   309 LRSIQHAPSVQMQEVPPDFY 328
             L+  Q  PS    ++  + Y
Sbjct:   792 LKGFQVTPSNYGLDIDDEAY 811

 Score = 42 (19.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query:     5 DKISYFYDGDVGSVYFG---PNHPMKPHR 30
             + + YF +GD    +F     NHP KP R
Sbjct:   426 ETLIYFNEGD--DAHFDLEEDNHPEKPAR 452


>WB|WBGene00018319 [details] [associations]
            symbol:hda-6 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
            deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 79/304 (25%), Positives = 129/304 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S 
Sbjct:   147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206

Query:   137 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 192
             H+    LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + 
Sbjct:   207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266

Query:   193 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NV 247
             P  +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V
Sbjct:   267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326

Query:   248 ARCWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQV 305
              RC  V  G      EL NE P+   +       S LR      +   S++ L   +  +
Sbjct:   327 QRCVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPI 385

Query:   306 LENLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEG 361
             +       + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ 
Sbjct:   386 VNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDL 443

Query:   362 DNDN 365
             + DN
Sbjct:   444 EEDN 447

 Score = 207 (77.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621

Query:   136 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 189
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   622 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 679

Query:   190 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 248
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739

Query:   249 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 308
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   740 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 793

Query:   309 LRSIQHAPSVQMQEVPPDFY 328
             L+  Q  PS    ++  + Y
Sbjct:   794 LKGFQVTPSNYGLDIDDEAY 813

 Score = 42 (19.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query:     5 DKISYFYDGDVGSVYFG---PNHPMKPHR 30
             + + YF +GD    +F     NHP KP R
Sbjct:   428 ETLIYFNEGD--DAHFDLEEDNHPEKPAR 454


>UNIPROTKB|A7LPD8 [details] [associations]
            symbol:hda-6 "Protein HDA-6, isoform c" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 223 (83.6 bits), Expect = 2.3e-15, P = 2.3e-15
 Identities = 79/304 (25%), Positives = 129/304 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S 
Sbjct:   147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206

Query:   137 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 192
             H+    LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + 
Sbjct:   207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266

Query:   193 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NV 247
             P  +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V
Sbjct:   267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326

Query:   248 ARCWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQV 305
              RC  V  G      EL NE P+   +       S LR      +   S++ L   +  +
Sbjct:   327 QRCVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPI 385

Query:   306 LENLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEG 361
             +       + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ 
Sbjct:   386 VNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDL 443

Query:   362 DNDN 365
             + DN
Sbjct:   444 EEDN 447

 Score = 207 (77.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621

Query:   136 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 189
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   622 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 679

Query:   190 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 248
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739

Query:   249 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 308
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   740 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 793

Query:   309 LRSIQHAPSVQMQEVPPDFY 328
             L+  Q  PS    ++  + Y
Sbjct:   794 LKGFQVTPSNYGLDIDDEAY 813

 Score = 42 (19.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query:     5 DKISYFYDGDVGSVYFG---PNHPMKPHR 30
             + + YF +GD    +F     NHP KP R
Sbjct:   428 ETLIYFNEGD--DAHFDLEEDNHPEKPAR 454


>ZFIN|ZDB-GENE-061013-95 [details] [associations]
            symbol:hdac4 "histone deacetylase 4" species:7955
            "Danio rerio" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
            "regulation of neural crest formation" evidence=IMP] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IMP]
            [GO:0001755 "neural crest cell migration" evidence=IMP]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
            GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
            IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
            SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
            GO:GO:0090299 Uniprot:Q2VC82
        Length = 1023

 Score = 223 (83.6 bits), Expect = 2.5e-15, P = 2.5e-15
 Identities = 59/208 (28%), Positives = 105/208 (50%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   741 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYL 799

Query:   135 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 189
             S H++ D  FFPG+G   E+G   G  + +N+    G++    D  +   F +++  +  
Sbjct:   800 SLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFTSVVMPIAN 859

Query:   190 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKKFNLPL----LVTG-GGGY 242
              ++P  +++  G D++ G    LG + L+    A+C  ++ K  + L    LV    GG+
Sbjct:   860 EFSPDVVLVSSGFDAVEGHPPPLGGYKLT----AKCFGYLTKQLMGLAGGRLVLALEGGH 915

Query:   243 TKENVARCWTVETGILLDTELPNEIPEN 270
                 +          LL  EL + IPE+
Sbjct:   916 DLTAICDASEACVSALLGNEL-DPIPED 942


>FB|FBgn0026428 [details] [associations]
            symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
            [GO:0022904 "respiratory electron transport chain" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
            EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
            EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
            KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
            NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
            EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
            Uniprot:Q8IR37
        Length = 1138

 Score = 222 (83.2 bits), Expect = 3.9e-15, P = 3.9e-15
 Identities = 52/194 (26%), Positives = 98/194 (50%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++    GFC  N++ +     ++     RVL +D DVHHG+G +  F    +V+ +S
Sbjct:   673 HHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYIS 732

Query:   136 FHKFGD-LFFP-GT-GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETY 191
              H++    FFP G  G+   +G+  G+ + +N+P  K G+ D  +   F+ +I  +   +
Sbjct:   733 LHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEF 792

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+  GD LG   ++ +G+     ++    +  ++V   GGY   +++  
Sbjct:   793 NPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASGRIIVCLEGGYNVNSISYA 852

Query:   251 WTVETGILLDTELP 264
              T+ T  LL   +P
Sbjct:   853 MTMCTKTLLGDPVP 866

 Score = 213 (80.0 bits), Expect = 4.1e-14, P = 4.1e-14
 Identities = 56/176 (31%), Positives = 83/176 (47%)

Query:    40 VFENLFEFCQIYAGGTIDAARRL--NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLG 97
             +  + FE   + +G TI+    L        +AI    G HHA K E +G+C+ N++ L 
Sbjct:   207 IHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALA 265

Query:    98 ILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKE 152
                 L  H   R+L ID DVHHG G +  FY   RV+  S H+F    F+P     D   
Sbjct:   266 TQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHA 325

Query:   153 IGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 207
             IG   G  Y  NVPL   G+ +  +  +F+ ++  V   + P  I++  G D+  G
Sbjct:   326 IGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALG 381


>TIGR_CMR|SPO_2002 [details] [associations]
            symbol:SPO_2002 "acetylpolyamine aminohydrolase"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
            metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
            acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
            GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
            ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
        Length = 341

 Score = 211 (79.3 bits), Expect = 4.4e-15, P = 4.4e-15
 Identities = 63/222 (28%), Positives = 97/222 (43%)

Query:    38 CPVFENLFEFCQIYAGGTIDAARRL-NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 96
             CP+ E  +E     A   I  A  +   +     ++   G HHA    A GFC++N+  +
Sbjct:   117 CPIAEGTWEAAYWSAQSAITGADLIIQGERSAYVLSRPPG-HHAFGDLAGGFCFLNNSAI 175

Query:    97 GILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT-GDVKEIGE 155
                 L     R   +DIDVHHG+G +  FY  D V+TVS H     F+P   G  +E G 
Sbjct:   176 AAERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFWGHAQERGA 235

Query:   156 REGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNL 215
               G  Y +N+PL  G  D  +       + +V  ++    +V+  G D+   D      +
Sbjct:   236 GRGLGYNLNLPLARGTGDDDYLDTLSVALRQVA-SFGSRVLVVALGLDASIDDPFQGLAI 294

Query:   216 SIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWT-VETG 256
             + DG A     +    +P+L    GGY  +++    T V TG
Sbjct:   295 TQDGFARIGAALAGTRVPVLFVQEGGYLCDSLGDTLTRVLTG 336


>UNIPROTKB|G4NCI1 [details] [associations]
            symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
            "Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
            complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
            evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
            silencing at telomere" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
            silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
            chromatin" evidence=ISS] [GO:0031060 "regulation of histone
            methylation" evidence=ISS] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
            "histone H3 deacetylation" evidence=ISS] Pfam:PF00850
            INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
            GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
            GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
            RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
            EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
            Uniprot:G4NCI1
        Length = 758

 Score = 213 (80.0 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 59/187 (31%), Positives = 93/187 (49%)

Query:    45 FEFCQIYAGGTIDAARRL-NNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGI---- 98
             FE   I AGG I+  + + + Q+ +  A+    G HHA++  A GFC  N++ +      
Sbjct:   200 FEASLISAGGAIETCKSIVSGQIKNGFAVIRPPG-HHAEQDSAMGFCIFNNVPIAAKVCQ 258

Query:    99 LELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH--KFGDLFFPGT--------G 148
              E  +   +VL +D DVHHG+G++  FY    V+ +S H  K G+ F+PG         G
Sbjct:   259 AEYPEICQKVLILDWDVHHGNGIQNVFYEDPNVLYISLHVYKNGE-FYPGKPENPMTADG 317

Query:   149 DVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 207
              +   G   G    IN+   D G+ D  +   F+ II  +   + P  +++  G D+ AG
Sbjct:   318 SISSCGSGPGLGRNINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAG 377

Query:   208 DRLG-CF 213
             D+LG CF
Sbjct:   378 DQLGGCF 384

 Score = 44 (20.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query:     5 DKISYFYDGDVGSVYFGPNHPMKPHRL 31
             D++    + D G+   GP+HP  P R+
Sbjct:    87 DRMKLHANADFGA---GPHHPEDPSRI 110


>UNIPROTKB|F1SEI2 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005080 "protein
            kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
            GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
            Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
        Length = 122

 Score = 189 (71.6 bits), Expect = 2.4e-14, P = 2.4e-14
 Identities = 35/98 (35%), Positives = 59/98 (60%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:    13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 72

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID 172
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D
Sbjct:    73 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 110


>ASPGD|ASPL0000014944 [details] [associations]
            symbol:hdaA species:162425 "Emericella nidulans"
            [GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
            [GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
            "chromatin silencing at telomere" evidence=IMP] [GO:0034599
            "cellular response to oxidative stress" evidence=IMP] [GO:1900376
            "regulation of secondary metabolite biosynthetic process"
            evidence=IMP] [GO:1900197 "negative regulation of penicillin
            biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
            metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
            metabolic process" evidence=IMP] [GO:0010913 "regulation of
            sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
            "rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
            region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
            heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
            "centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0071585 "detoxification of cadmium ion" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
            "chromatin silencing at centromere" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0031060 "regulation of histone
            methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
            rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
            EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
        Length = 766

 Score = 211 (79.3 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 58/192 (30%), Positives = 95/192 (49%)

Query:    37 DCPVFENL-FEFCQIYAGGTID-----AARRLNNQLCDIAINWAGGLHHAKKCEASGFCY 90
             D   F NL F    +  GG I+     A R++ N    IA+    G HHA+  +  GFC 
Sbjct:   224 DSIYFNNLTFASSLLSVGGAIETCLAVATRKVKNA---IAVIRPPG-HHAEHDKTMGFCL 279

Query:    91 INDLVLGIL---ELLKYHAR-VLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFP 145
              N++ +      + L    R ++ +D DVHHG+G+++AFY    V+ +S H + +  F+P
Sbjct:   280 FNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYP 339

Query:   146 GT--GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 202
             G   GD    G   G+   +N+P    G+ D  +   F  ++  + + + P  +++  G 
Sbjct:   340 GEKDGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGF 399

Query:   203 DSLAGDRLG-CF 213
             D+ AGD LG CF
Sbjct:   400 DAAAGDTLGGCF 411


>UNIPROTKB|Q47YS1 [details] [associations]
            symbol:CPS_3373 "Histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 200 (75.5 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 63/213 (29%), Positives = 92/213 (43%)

Query:    39 PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 98
             P  + L E      GGTI  A+         ++N  GG HHA     SGFC INDL L  
Sbjct:    83 PWSQQLIERTLTAVGGTIMTAQLALEY--GKSLNLTGGYHHAFANFGSGFCMINDLYLAA 140

Query:    99 LELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER 156
             L +L+    ++VL  D DVH GDG  +       V TVS H  G+  FP     K++   
Sbjct:   141 LTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHR---KQVSN- 194

Query:   157 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
                   ++  L  G  D+ +       ++K   ++ P A++   G D    D LG  ++S
Sbjct:   195 ------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDIS 248

Query:   217 IDGHAECVRFV----KKFNLPLLVTGGGGYTKE 245
               G     + V    K   +P+    GGGY ++
Sbjct:   249 TQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRD 281


>TIGR_CMR|CPS_3373 [details] [associations]
            symbol:CPS_3373 "histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 200 (75.5 bits), Expect = 3.9e-14, P = 3.9e-14
 Identities = 63/213 (29%), Positives = 92/213 (43%)

Query:    39 PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 98
             P  + L E      GGTI  A+         ++N  GG HHA     SGFC INDL L  
Sbjct:    83 PWSQQLIERTLTAVGGTIMTAQLALEY--GKSLNLTGGYHHAFANFGSGFCMINDLYLAA 140

Query:    99 LELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER 156
             L +L+    ++VL  D DVH GDG  +       V TVS H  G+  FP     K++   
Sbjct:   141 LTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHR---KQVSN- 194

Query:   157 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
                   ++  L  G  D+ +       ++K   ++ P A++   G D    D LG  ++S
Sbjct:   195 ------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDIS 248

Query:   217 IDGHAECVRFV----KKFNLPLLVTGGGGYTKE 245
               G     + V    K   +P+    GGGY ++
Sbjct:   249 TQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRD 281


>TAIR|locus:2119201 [details] [associations]
            symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
            "tubulin deacetylase activity" evidence=IDA] [GO:0043014
            "alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
            self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
            evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
            evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
            [GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
            membrane organization" evidence=RCA] [GO:0016556 "mRNA
            modification" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
            biosynthetic process, mevalonate-independent pathway" evidence=RCA]
            [GO:0019760 "glucosinolate metabolic process" evidence=RCA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
            GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
            GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
            EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
            UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
            STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
            GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
            OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
            Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
        Length = 423

 Score = 204 (76.9 bits), Expect = 7.3e-14, P = 7.3e-14
 Identities = 59/216 (27%), Positives = 97/216 (44%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA      GFC   ++ +      + H   R+  ID DVHHG+G  +AF     +  +S
Sbjct:   201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260

Query:   136 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 195
              H+ G   +PGTG + +IG+ +G+   +N+PL  G  D +   +F+ II    + + P  
Sbjct:   261 THQDGS--YPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDI 318

Query:   196 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVA 248
             I++  G D+   D L     +   +    + +K+  L   V GG       GGY  E+++
Sbjct:   319 ILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKR--LAKEVCGGRCVFFLEGGYNLESLS 376

Query:   249 RCWTVETGILL-DTELPNEIPENEYIKYFAPECSLR 283
                      LL +  L +E     Y+ Y  P   +R
Sbjct:   377 SSVADSFRALLGEDSLASEFDNPAYL-YDEPMRKVR 411


>FB|FBgn0041210 [details] [associations]
            symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
            EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
            STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
            Bgee:Q8I9J6 Uniprot:Q8I9J6
        Length = 1255

 Score = 211 (79.3 bits), Expect = 7.9e-14, P = 7.9e-14
 Identities = 46/150 (30%), Positives = 80/150 (53%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMT 133
             HHA+   A GFC+ N + +   +LL+       R+L +D DVHHG+G ++AFY +  ++ 
Sbjct:   970 HHAEANLAMGFCFFNSIAIAA-KLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILY 1028

Query:   134 VSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVP----LKDGIDDTSFTRLFKTIISKVV 188
             +S H+  D  FFPGTG   E G   G  + +N+     L   + D  +   F+T++  + 
Sbjct:  1029 LSIHRHDDGNFFPGTGGPTECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIA 1088

Query:   189 ETYAPGAIVLQCGADSLAGDR--LGCFNLS 216
              ++ P  +++  G D+  G    LG +++S
Sbjct:  1089 RSFNPDIVLVSSGFDAATGHPAPLGGYHVS 1118


>TIGR_CMR|SPO_3195 [details] [associations]
            symbol:SPO_3195 "histone deacetylase family protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
            GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
            Uniprot:Q5LNK8
        Length = 364

 Score = 200 (75.5 bits), Expect = 1.3e-13, P = 1.3e-13
 Identities = 62/224 (27%), Positives = 101/224 (45%)

Query:    34 LGEDCPVFENLFEFCQIYAGGTIDAARRL--NNQLCDIAINWAGGLHHAKKCEASGFCYI 91
             LG   P     FE   + AG  IDA   +         A++   G HH      +GFC +
Sbjct:    97 LGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPG-HHCLPDWPNGFCLL 155

Query:    92 NDLVLGILELLKYHA---RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP-GT 147
              ++ + I E  K      +V  +D DVHHG+G E  +Y  D V+T+S H+  D  +P  T
Sbjct:   156 ANIAIAI-EAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQ--DRCYPHDT 212

Query:   148 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 207
             G + + G+  G  + +N+PL  G    ++    + +I   ++ +    +++ CG D+   
Sbjct:   213 GSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVIIACGFDAGGF 272

Query:   208 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-GGYTKENVARC 250
             D L     S +   E  R V + +   LV    GGY++  V  C
Sbjct:   273 DPLARMMCSAETFREMTRRVMQVSDGKLVAAHEGGYSELYVPFC 316


>MGI|MGI:2385252 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex"
            evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
            evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
            evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
            MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
            IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
            ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
            STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
            DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
            KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
            OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
            Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
            GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
        Length = 347

 Score = 199 (75.1 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 61/199 (30%), Positives = 90/199 (45%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    KE   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKEAIRRK-------VELEW 227

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  + + ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+  ++P+L+   GGY K
Sbjct:   288 VVRAHDIPILMVTSGGYQK 306


>RGD|1311706 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
            development" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
            GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
            IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
            STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
            KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
            Genevestigator:B2GUW3 Uniprot:B2GUW3
        Length = 347

 Score = 199 (75.1 bits), Expect = 1.4e-13, P = 1.4e-13
 Identities = 61/199 (30%), Positives = 90/199 (45%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    KE   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKEAIRRK-------VELEW 227

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  + + ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+  ++P+L+   GGY K
Sbjct:   288 VVRAHDIPILMVTSGGYQK 306


>UNIPROTKB|H9KZJ3 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
            Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
        Length = 615

 Score = 204 (76.9 bits), Expect = 1.7e-13, P = 1.7e-13
 Identities = 64/233 (27%), Positives = 114/233 (48%)

Query:    43 NLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGI-L 99
             N +   ++  G  +      ++ ++C+ +A+    G HH+++  A+GFC  N++ +    
Sbjct:   100 NTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAANGFCLFNNVAIAAEY 158

Query:   100 ELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL-FFPGT--GDVKEIGE 155
               LKY   R+L +D DVHHG G +  F     V+  S+H++    F+P     D   +G 
Sbjct:   159 AKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEFWPSLKESDYDAVGL 218

Query:   156 REGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
              +GK + IN+P  K G+ ++ +   F  ++  V   + P  +++  G DS  GD  G  N
Sbjct:   219 GKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFDPELVLVSSGYDSGIGDPEGQMN 278

Query:   215 LSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVAR--CWTVETGILLDTELP 264
              + +  A    F+ +  +  L V   GGY  ++++   C TV+T  LL   LP
Sbjct:   279 ATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKT--LLRDPLP 329


>WB|WBGene00007953 [details] [associations]
            symbol:hda-11 species:6239 "Caenorhabditis elegans"
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            [GO:0033558 "protein deacetylase activity" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
            RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
            SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
            EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
            UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
            NextBio:920378 Uniprot:Q18477
        Length = 334

 Score = 197 (74.4 bits), Expect = 2.0e-13, P = 2.0e-13
 Identities = 66/221 (29%), Positives = 95/221 (42%)

Query:    38 CPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLG 97
             C +   L    ++ AGGT+ AA          AIN  GG HHA      GFC+  D+ + 
Sbjct:   105 CIIESKLLHPLRLQAGGTVLAANLALKH--GWAINVGGGFHHASHSGGGGFCFYADITMA 162

Query:    98 ILELL--KYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGE 155
             I +L   K  A  + +D+D H G+G   A  F D      F  F    +P   + ++   
Sbjct:   163 IFDLFDKKAIANAIVVDLDAHQGNG--HARDFADNPNVFVFDVFNPYVYPHDREARQFIN 220

Query:   156 REGKFYAINVPLKDGIDDTSF-TRLFKTIISKVVE---TYAPGA--IVLQCGADSLAGDR 209
             R     A++V       DTS+ + L K +   +++   T  PG   I+   G D L GD 
Sbjct:   221 R-----AVHV--NGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDP 273

Query:   210 LGCFNLS---IDGHAECV-RFVKKFNLPLLVTGGGGYTKEN 246
             LG   LS   I    E V    K   +P+ +   GGY K+N
Sbjct:   274 LGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGYQKDN 314


>UNIPROTKB|Q18477 [details] [associations]
            symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
            elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
            RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
            SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
            EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
            UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
            NextBio:920378 Uniprot:Q18477
        Length = 334

 Score = 197 (74.4 bits), Expect = 2.0e-13, P = 2.0e-13
 Identities = 66/221 (29%), Positives = 95/221 (42%)

Query:    38 CPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLG 97
             C +   L    ++ AGGT+ AA          AIN  GG HHA      GFC+  D+ + 
Sbjct:   105 CIIESKLLHPLRLQAGGTVLAANLALKH--GWAINVGGGFHHASHSGGGGFCFYADITMA 162

Query:    98 ILELL--KYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGE 155
             I +L   K  A  + +D+D H G+G   A  F D      F  F    +P   + ++   
Sbjct:   163 IFDLFDKKAIANAIVVDLDAHQGNG--HARDFADNPNVFVFDVFNPYVYPHDREARQFIN 220

Query:   156 REGKFYAINVPLKDGIDDTSF-TRLFKTIISKVVE---TYAPGA--IVLQCGADSLAGDR 209
             R     A++V       DTS+ + L K +   +++   T  PG   I+   G D L GD 
Sbjct:   221 R-----AVHV--NGHTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDP 273

Query:   210 LGCFNLS---IDGHAECV-RFVKKFNLPLLVTGGGGYTKEN 246
             LG   LS   I    E V    K   +P+ +   GGY K+N
Sbjct:   274 LGAMKLSPQCIIARDEVVFNLAKSKGIPICMVTSGGYQKDN 314


>UNIPROTKB|Q9KQF6 [details] [associations]
            symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
            protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
            ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
            KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
            Uniprot:Q9KQF6
        Length = 306

 Score = 195 (73.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 57/186 (30%), Positives = 85/186 (45%)

Query:    69 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFY 126
             +AI+ +GG HHA     SGFC  NDL +     L   +  +VL ID DVHHGDG      
Sbjct:   116 VAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCA 175

Query:   127 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 186
               D ++T+SFH   D  FP                +++V   +   D  F   F  ++  
Sbjct:   176 ERDEIITLSFHC--DKNFPARKPAS----------SMDVGYANQTGDEEFLSTFIQVVEM 223

Query:   187 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGGGY 242
              V  + P  I+   G D    D LG  ++S    A+  RF+    K+ ++P+    GGGY
Sbjct:   224 AVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGY 283

Query:   243 TKENVA 248
              +++ A
Sbjct:   284 REDHTA 289


>TIGR_CMR|VC_2042 [details] [associations]
            symbol:VC_2042 "histone deacetylase/AcuC/AphA family
            protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
            PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
            DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
            ProtClustDB:CLSK874650 Uniprot:Q9KQF6
        Length = 306

 Score = 195 (73.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 57/186 (30%), Positives = 85/186 (45%)

Query:    69 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFY 126
             +AI+ +GG HHA     SGFC  NDL +     L   +  +VL ID DVHHGDG      
Sbjct:   116 VAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCA 175

Query:   127 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 186
               D ++T+SFH   D  FP                +++V   +   D  F   F  ++  
Sbjct:   176 ERDEIITLSFHC--DKNFPARKPAS----------SMDVGYANQTGDEEFLSTFIQVVEM 223

Query:   187 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGGGY 242
              V  + P  I+   G D    D LG  ++S    A+  RF+    K+ ++P+    GGGY
Sbjct:   224 AVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGY 283

Query:   243 TKENVA 248
              +++ A
Sbjct:   284 REDHTA 289


>UNIPROTKB|F1PSI9 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
            Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
        Length = 319

 Score = 196 (74.1 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 60/199 (30%), Positives = 89/199 (44%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAMER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              +D+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   149 IVDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 199

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  + K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   200 GTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDELVFR 259

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+   +P+L+   GGY K
Sbjct:   260 VVRGRQVPILMVTSGGYQK 278


>UNIPROTKB|E7ETT9 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
            Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
            Uniprot:E7ETT9
        Length = 319

 Score = 195 (73.7 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 62/199 (31%), Positives = 89/199 (44%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   149 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 199

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   200 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 259

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+   +P+L+   GGY K
Sbjct:   260 MVRGRRVPILMVTSGGYQK 278


>UNIPROTKB|Q9GKU5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
            fascicularis" [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
            EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
        Length = 347

 Score = 196 (74.1 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 62/199 (31%), Positives = 90/199 (45%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 227

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+  ++P+L+   GGY K
Sbjct:   288 MVRGRHVPILMVTSGGYQK 306


>UNIPROTKB|Q96DB2 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
            EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
            EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
            RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
            SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
            PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
            DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
            GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
            GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
            PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
            InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
            BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
            ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
            Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
        Length = 347

 Score = 195 (73.7 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 62/199 (31%), Positives = 89/199 (44%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 227

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+   +P+L+   GGY K
Sbjct:   288 MVRGRRVPILMVTSGGYQK 306


>UNIPROTKB|F1PN11 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IEA]
            [GO:0071218 "cellular response to misfolded protein" evidence=IEA]
            [GO:0070848 "response to growth factor stimulus" evidence=IEA]
            [GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
            "polyubiquitinated misfolded protein transport" evidence=IEA]
            [GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
            complex binding" evidence=IEA] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
            binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
            [GO:0045861 "negative regulation of proteolysis" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
            "ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IEA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IEA]
            [GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
            "tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
            [GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
            complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
        Length = 1157

 Score = 202 (76.2 bits), Expect = 7.4e-13, P = 7.4e-13
 Identities = 49/185 (26%), Positives = 89/185 (48%)

Query:    78 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ +
Sbjct:   623 HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYI 682

Query:   135 SFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 190
             S H++    FFP    G   ++G+  G  + +NV      + D  +   +  ++  +   
Sbjct:   683 SLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYE 742

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--E 245
             + P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E
Sbjct:   743 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVLILEGGYNLTSISE 802

Query:   246 NVARC 250
             ++A C
Sbjct:   803 SMAAC 807

 Score = 175 (66.7 bits), Expect = 7.7e-10, P = 7.7e-10
 Identities = 62/229 (27%), Positives = 99/229 (43%)

Query:    48 CQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGILELL 102
             C   A G++    DA   L N++ + +AI    G HHA+     G+C  N + +      
Sbjct:   197 CACLASGSVLRLVDAV--LRNEIRNGMAIVRPPG-HHAQHSLMDGYCMFNHVAVAARYAQ 253

Query:   103 KYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPG--TGDVKEIGERE 157
             + H   RVL +D DVHHG G +  F     V+  S H++    F+P     +   IG  +
Sbjct:   254 QKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQ 313

Query:   158 GKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
             G+ Y INVP    G+ D  +   F  ++  V   + P  +++  G D+L GD  G    +
Sbjct:   314 GQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQLVLVAAGFDALQGDPKGEMATT 373

Query:   217 IDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTVETGILLDTELP 264
               G A+    +       L+++  GGY    +A   +     LL    P
Sbjct:   374 PAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCP 422


>UNIPROTKB|F1SPG6 [details] [associations]
            symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00390000003411 EMBL:CU928273
            Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
        Length = 382

 Score = 193 (73.0 bits), Expect = 1.0e-12, P = 1.0e-12
 Identities = 55/182 (30%), Positives = 81/182 (44%)

Query:    70 AINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVLYIDIDVHHGDGVEEAFY 126
             AIN  GG HH       GFC   D+ L I    E ++  +R   ID+D H G+G E  F 
Sbjct:   133 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 192

Query:   127 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 186
                RV  +    +    +PG    K+   R+       V L+   +D  +    +  + K
Sbjct:   193 GDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEWATEDDEYLTKVERNLEK 243

Query:   187 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGY 242
              ++ + P  +V   G D L GDRLG  ++S  G     E V R V+   +P+L+   GGY
Sbjct:   244 ALQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGY 303

Query:   243 TK 244
              K
Sbjct:   304 QK 305


>UNIPROTKB|F1MWX4 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
            "histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
            Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
        Length = 386

 Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 59/199 (29%), Positives = 90/199 (45%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +   ++    AIN  GG HH       GFC   D+ L I    + ++  ++  
Sbjct:   118 GGTIMAGKLAVDR--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKAT 175

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              +D+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   176 IVDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 226

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D  + +  +  + K ++ + P  +V   G D L GDRLG   +S  G     E V R
Sbjct:   227 GTEDDEYLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFR 286

Query:   226 FVKKFNLPLLVTGGGGYTK 244
              V+   LP+L+   GGY K
Sbjct:   287 IVRGRQLPILMVTSGGYQK 305


>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
            symbol:hdac10 "histone deacetylase 10"
            species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
            Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
            Uniprot:F1QCV2
        Length = 728

 Score = 198 (74.8 bits), Expect = 1.1e-12, P = 1.1e-12
 Identities = 59/228 (25%), Positives = 109/228 (47%)

Query:    42 ENLFEFCQIYAGGT---IDAA--RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 96
             +N++   ++ AG T   +D+   R + N +    +   G  HH+++  A+GFC  N++ +
Sbjct:   152 QNIYHCAKLAAGATLQLVDSVMKREVRNGMA--LVRPPG--HHSQRSAANGFCVFNNVAI 207

Query:    97 GILELLK-YHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPGT--GDVK 151
               L   K Y+  R+L +D DVHHG G++  F     V+  S+H++    F+P     D  
Sbjct:   208 AALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYEHQSFWPNLPESDYS 267

Query:   152 EIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
              +G+ +G  + IN+P  K G+ ++ +   F  ++  V   + P  +++  G DS  GD  
Sbjct:   268 SVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELVIVSAGFDSAIGDPE 327

Query:   211 G--CFNLSIDGH-AECVRFVKKFNLPLLVTGGGGYTKENVARCWTVET 255
             G  C    I  H    +  +    + +++ GG   T    + C TV +
Sbjct:   328 GEMCALPEIFAHLTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTVHS 375


>UNIPROTKB|Q9UBN7 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
            "beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
            to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
            deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
            deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
            "microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
            evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IDA]
            [GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
            "protein deacetylation" evidence=IMP] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IMP]
            [GO:0043242 "negative regulation of protein complex disassembly"
            evidence=IMP] [GO:0060632 "regulation of microtubule-based
            movement" evidence=IC] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
            evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
            migration" evidence=IMP] [GO:0045861 "negative regulation of
            proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
            evidence=IPI] [GO:0070848 "response to growth factor stimulus"
            evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
            [GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
            response to topologically incorrect protein" evidence=IMP]
            [GO:0006886 "intracellular protein transport" evidence=IMP]
            [GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
            "microtubule associated complex" evidence=IDA] [GO:0043014
            "alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
            evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IMP]
            [GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
            [GO:0051354 "negative regulation of oxidoreductase activity"
            evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
            metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
            evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
            transport" evidence=IMP] [GO:0051788 "response to misfolded
            protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=IMP] [GO:0031593
            "polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
            evidence=IDA] [GO:0010033 "response to organic substance"
            evidence=IMP] [GO:0009636 "response to toxic substance"
            evidence=IMP] [GO:0009967 "positive regulation of signal
            transduction" evidence=IMP] [GO:0010469 "regulation of receptor
            activity" evidence=IMP] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
            binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IMP]
            [GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0048471
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
            GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
            GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
            GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
            GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
            GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
            GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
            GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
            EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
            OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
            HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
            EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
            IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
            PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
            ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
            MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
            PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
            Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
            CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
            HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
            neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
            HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
            SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
            EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
            ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
            Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
            GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
            GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
        Length = 1215

 Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 51/185 (27%), Positives = 88/185 (47%)

Query:    78 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ V
Sbjct:   610 HHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYV 669

Query:   135 SFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 190
             S H++    FFP    G   +IG   G  + +NV      + D  +   +  ++  +   
Sbjct:   670 SLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYE 729

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--E 245
             + P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E
Sbjct:   730 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISE 789

Query:   246 NVARC 250
             ++A C
Sbjct:   790 SMAAC 794

 Score = 166 (63.5 bits), Expect = 8.1e-09, P = 8.1e-09
 Identities = 51/194 (26%), Positives = 82/194 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S
Sbjct:   215 HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFS 274

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   +
Sbjct:   275 IHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEF 334

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+L GD  G    +  G A+    +       L+++  GGY    +A  
Sbjct:   335 QPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEG 394

Query:   251 WTVETGILLDTELP 264
              +     LL    P
Sbjct:   395 VSASLHTLLGDPCP 408


>UNIPROTKB|B4DZH6 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
            GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
            UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
            EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
            PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
            ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
        Length = 1229

 Score = 199 (75.1 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 51/185 (27%), Positives = 88/185 (47%)

Query:    78 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ V
Sbjct:   624 HHAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYV 683

Query:   135 SFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 190
             S H++    FFP    G   +IG   G  + +NV      + D  +   +  ++  +   
Sbjct:   684 SLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYE 743

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--E 245
             + P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E
Sbjct:   744 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISE 803

Query:   246 NVARC 250
             ++A C
Sbjct:   804 SMAAC 808

 Score = 166 (63.5 bits), Expect = 8.3e-09, P = 8.3e-09
 Identities = 51/194 (26%), Positives = 82/194 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S
Sbjct:   229 HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFS 288

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   +
Sbjct:   289 IHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEF 348

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+L GD  G    +  G A+    +       L+++  GGY    +A  
Sbjct:   349 QPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEG 408

Query:   251 WTVETGILLDTELP 264
              +     LL    P
Sbjct:   409 VSASLHTLLGDPCP 422


>TAIR|locus:2180657 [details] [associations]
            symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
            KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
            EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
            RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
            UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
            PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
            KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
            PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
            Uniprot:Q944K3
        Length = 387

 Score = 191 (72.3 bits), Expect = 1.8e-12, P = 1.8e-12
 Identities = 60/200 (30%), Positives = 88/200 (44%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI-LELLKYH-ARVLY 110
             GGTI AA+    +    AIN  GG HH       GFC   D+ L I    L+   +RV+ 
Sbjct:   177 GGTILAAKLATER--GWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMI 234

Query:   111 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDG 170
             ID+D H G+G E      +RV  +      D++ P   ++     R  +F    V +  G
Sbjct:   235 IDLDAHQGNGHETDLGDDNRVYIL------DMYNP---EIYPFDYRARRFIDQKVEVMSG 285

Query:   171 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-RF 226
                  + R     +      + P  ++   G D L GD LG   +S DG     E V RF
Sbjct:   286 TTTDEYLRKLDEALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRF 345

Query:   227 VKKFNLPLLVTGGGGYTKEN 246
              ++ N+PL++   GGY K +
Sbjct:   346 AREKNIPLVMLTSGGYMKSS 365


>UNIPROTKB|F1LSE3 [details] [associations]
            symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
            norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
            Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
            GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
            GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
            GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
            GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
            GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
            Uniprot:F1LSE3
        Length = 1155

 Score = 198 (74.8 bits), Expect = 2.1e-12, P = 2.1e-12
 Identities = 62/242 (25%), Positives = 109/242 (45%)

Query:    26 MKPHRLYNLG---EDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHA 80
             MK   L+  G   E   +  + F   Q+  G         L+ ++ + IAI    G HHA
Sbjct:   556 MKTRDLHREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HHA 614

Query:    81 KKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 137
             +   A GFC+ N + +     +++   A R+L +D DVHHG+G +  F     V+ VS H
Sbjct:   615 EPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSLH 674

Query:   138 KFG-DLFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYAP 193
             ++    FFP    G   ++G   G  + +NVP     + D  +   +  ++  +   + P
Sbjct:   675 RYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHRLVLPIAYEFNP 734

Query:   194 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--ENVA 248
               +++  G D+  GD LG   ++ +G+A     +       + L++ GG   T   E++A
Sbjct:   735 ELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISESMA 794

Query:   249 RC 250
              C
Sbjct:   795 AC 796

 Score = 174 (66.3 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 52/182 (28%), Positives = 82/182 (45%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++    G+C  N L +      K H   R+L +D DVHHG G +  F     V+  S
Sbjct:   214 HHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFS 273

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  I+  V   +
Sbjct:   274 IHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEF 333

Query:   192 APGAIVLQCGADSLAGD---RLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENV 247
              P  +++  G D+L GD   R G  + +  G A    F+       L+++  GGY    +
Sbjct:   334 QPQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHFLMGLAGGKLILSLEGGYNLHAL 393

Query:   248 AR 249
             A+
Sbjct:   394 AK 395


>UNIPROTKB|F1NYW6 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
            UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
            Uniprot:F1NYW6
        Length = 357

 Score = 188 (71.2 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 60/199 (30%), Positives = 87/199 (43%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +   ++    AIN  GG HH    +  GFC   D+ L I    E +   ++  
Sbjct:   118 GGTIMAGKLAVDR--GWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKAT 175

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG G  K   +R+       V L+ 
Sbjct:   176 IIDLDAHQGNGHERDFMNDHRVYIMD--AYNRYIYPGDGFAKRAIKRK-------VELEW 226

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +DT + +   T +   +    P  IV   G D L GD LG   +S  G     E V +
Sbjct:   227 GTEDTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFK 286

Query:   226 FVKKFNLPLLVTGGGGYTK 244
               +   +P+L+   GGY K
Sbjct:   287 AARSRGIPILMVTSGGYQK 305


>UNIPROTKB|I3LEZ7 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
            Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
        Length = 1130

 Score = 196 (74.1 bits), Expect = 3.4e-12, P = 3.4e-12
 Identities = 60/237 (25%), Positives = 103/237 (43%)

Query:    38 CPVFENLFEFCQIYAGGTIDAARRL--NNQLCDIAINWAGGLHHAKKCEASGFCYINDLV 95
             CP     F   Q+ AG        +     L  IA+    G HHA++  A GFC+ N + 
Sbjct:   581 CP---GTFACAQLAAGAACRLVEAVLAGEVLNGIAVVRPPG-HHAERDSACGFCFFNSVA 636

Query:    96 LGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFP--GTGD 149
             +     + +  HA R+L +D DVHHG+G +  F     V+ +S H++    FFP    G 
Sbjct:   637 VAARHAQAISGHALRILIVDWDVHHGNGTQHLFEEDPSVLYISLHRYDHGTFFPMGDEGA 696

Query:   150 VKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 208
               +IG+  G  + +NV      + D  +   +  ++  +   + P  +++  G D+  GD
Sbjct:   697 SSQIGQAAGTGFTVNVAWNGPRVGDPEYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGD 756

Query:   209 RLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTVETGILLDTELP 264
              LG   +S + +A     +    N  +++   GGY   +++      T  LL    P
Sbjct:   757 PLGGCQVSPECYAHLTHLLMGLANGRIILILEGGYNLISISESMAACTRSLLGDSPP 813

 Score = 171 (65.3 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 52/194 (26%), Positives = 83/194 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N + L      + H   RVL +D DVHHG G +  F     V+  S
Sbjct:   225 HHAQHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFS 284

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   +
Sbjct:   285 IHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEF 344

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+L GD  G    +  G A+    +       L+++  GGY   ++A  
Sbjct:   345 QPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEG 404

Query:   251 WTVETGILLDTELP 264
              +     LL    P
Sbjct:   405 VSASLHTLLGDPCP 418


>UNIPROTKB|Q4K3I0 [details] [associations]
            symbol:aphA_3 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
            ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
            KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
            ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
            Uniprot:Q4K3I0
        Length = 343

 Score = 186 (70.5 bits), Expect = 4.6e-12, P = 4.6e-12
 Identities = 46/172 (26%), Positives = 74/172 (43%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKY-HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA      G+CY+N+  +     L   H +V  +D+D HHG+G +  FY    V+  S 
Sbjct:   158 HHAAGDLMGGYCYLNNAAIAAQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSI 217

Query:   137 HKFGDLFFPG-TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 195
             H   +  FP   G   E GE  G+ +  N PL  G    +++   +   +++ + Y    
Sbjct:   218 HGHPEAEFPFFLGYADECGEGAGEGFNFNYPLAAGSGWDAWSAALEQACNEI-QRYDADI 276

Query:   196 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 247
             IV+  G D+   D +  F L    +    + +     P L    GGY  E +
Sbjct:   277 IVVSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPTLFVMEGGYAVEEI 328


>UNIPROTKB|F1MQP3 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
            Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
        Length = 1128

 Score = 202 (76.2 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 52/195 (26%), Positives = 91/195 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA+   A GFC+ N + +     + +  HA R+L +D D+HHG+G +  F     V+ +
Sbjct:   610 HHAEPDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYI 669

Query:   135 SFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 190
             S H++    FFP    G    IG+  G  + +NV      + D  +   +  ++  V   
Sbjct:   670 SLHRYDHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAWHRLVLPVAYE 729

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECV-RFVKKFNLPLLVTGGGGYTKENVAR 249
             + P  +++  G D+  GD LG   +S +G+A    + +   N  +++   GGY   +++ 
Sbjct:   730 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILILEGGYNLTSISE 789

Query:   250 CWTVETGILLDTELP 264
                  T  LL   LP
Sbjct:   790 SMAACTRSLLGDPLP 804

 Score = 177 (67.4 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 52/194 (26%), Positives = 85/194 (43%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N + +      + H   RVL +D DVHHG G++ AF     V+  S
Sbjct:   215 HHAQHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFS 274

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   +
Sbjct:   275 IHRYEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEF 334

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+L GD  G    +  G A+    +       L+++  GGY   ++A  
Sbjct:   335 QPQLVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEG 394

Query:   251 WTVETGILLDTELP 264
              +     LL    P
Sbjct:   395 VSATLHTLLGDPCP 408

 Score = 37 (18.1 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 6/10 (60%), Positives = 8/10 (80%)

Query:    34 LGEDCPVFEN 43
             LG+ CPV E+
Sbjct:   403 LGDPCPVLES 412


>WB|WBGene00001838 [details] [associations]
            symbol:hda-10 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
            "histone deacetylase activity" evidence=ISS] Pfam:PF00850
            INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
            PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
            SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
            EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
            CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
            OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
        Length = 517

 Score = 190 (71.9 bits), Expect = 4.8e-12, P = 4.8e-12
 Identities = 62/236 (26%), Positives = 104/236 (44%)

Query:    36 EDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCDIAINWAGGLHHAKKCEASGFCYINDL 94
             ED  V    +   ++ AG +ID     +  +   IA     G HHA   E  GFC  N++
Sbjct:    95 EDIYVNSATWHRAKLAAGASIDLMTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNV 153

Query:    95 VLGILELLKYHARVLYIDIDVHHGDGVEEAF--YFTDRVMTVSFHKFGD-LFFPGTGDVK 151
              +     ++   +VL +D DVH G+G +E         V  +S H++ +  F+P   ++ 
Sbjct:   154 AIAAKAAIQNGQKVLIVDYDVHAGNGTQECVEQMGEGNVQLISIHRYENGHFWP---NMP 210

Query:   152 EIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 210
             + G        IN+PL   G+ D  +  LF  II   +  + P  +++  G D+  GD  
Sbjct:   211 QTGIYHNYKNTINLPLNTIGLTDADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPE 270

Query:   211 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARC--WTVETGILLDTELP 264
             G   ++  G A  +R +    +P+     GGY  + +A    W +    LL  E+P
Sbjct:   271 GSMQVTPAGFATMIRMLIDTGIPVAALLEGGYFLDALAADSEWVLRA--LLGEEIP 324


>UNIPROTKB|F1MWS5 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070491 "repressing transcription factor binding"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0035097 "histone methyltransferase
            complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
            factor complex" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
            GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
            GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
            GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
            Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
        Length = 895

 Score = 193 (73.0 bits), Expect = 5.4e-12, P = 5.4e-12
 Identities = 37/114 (32%), Positives = 65/114 (57%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNILYIS 841

Query:   136 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTII 184
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+ ++
Sbjct:   842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRLVL 895


>UNIPROTKB|Q969S8 [details] [associations]
            symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0014003
            "oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
            "histone deacetylase activity" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
            deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
            EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
            GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
            EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
            EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
            IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
            RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
            SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
            DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
            Ensembl:ENST00000216271 Ensembl:ENST00000349505
            Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
            UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
            HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
            PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
            OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
            BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
            NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
            Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
            Uniprot:Q969S8
        Length = 669

 Score = 191 (72.3 bits), Expect = 5.8e-12, P = 5.8e-12
 Identities = 55/202 (27%), Positives = 93/202 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH ++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFS 193

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G  +G  + +N+P    G+ +  +   F  ++  +   +
Sbjct:   194 WHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTK 244
              P  +++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  
Sbjct:   254 DPELVLVSAGFDSAIGDPEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHL 307

Query:   245 ENVAR--CWTVETGILLDTELP 264
             E++A   C TV+T +L D   P
Sbjct:   308 ESLAESVCMTVQT-LLGDPAPP 328


>TIGR_CMR|SPO_A0096 [details] [associations]
            symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
            "catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
            GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
            ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
            GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
        Length = 344

 Score = 185 (70.2 bits), Expect = 6.1e-12, P = 6.1e-12
 Identities = 51/177 (28%), Positives = 84/177 (47%)

Query:    33 NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD--IAINWAGGLHHAKKCEASGFCY 90
             N GE  P     +E   + AG    A   + +   D   A++   G HHA +  + GFC 
Sbjct:    73 NAGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPG-HHAMRDGSMGFCL 131

Query:    91 INDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 147
             + ++ + I E  +      RV  +D DVHHG+G ++ FY  + V+T+S H+  + F PG+
Sbjct:   132 LANIAIAI-EAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQ-ENCFPPGS 189

Query:   148 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADS 204
             G   E G   G+   +NV L  G    S+      ++   +  + P  I++ CG D+
Sbjct:   190 GSGSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDA 246


>MGI|MGI:2158340 [details] [associations]
            symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
            binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
            OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
            EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
            ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
            PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
            KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
            HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
            CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
            GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
        Length = 666

 Score = 189 (71.6 bits), Expect = 9.7e-12, P = 9.7e-12
 Identities = 56/202 (27%), Positives = 96/202 (47%)

Query:    78 HHAKKCEASGFCYINDLVLGILELL-KYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N++ L       KY   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFS 193

Query:   136 FHKF--GDLF-FPGTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++  G  + F    D   +G+ +G+ + +N+P    G+ +  +   F  ++  +   +
Sbjct:   194 WHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTK 244
              P  +++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  
Sbjct:   254 DPELVLVSAGFDSAIGDPEG----QMQATPEC--FAHLTQLLQVLAGGRICAVLEGGYHL 307

Query:   245 ENVAR--CWTVETGILLDTELP 264
             E++A+  C  V+T +L D   P
Sbjct:   308 ESLAQSVCMMVQT-LLGDPTPP 328


>DICTYBASE|DDB_G0280195 [details] [associations]
            symbol:hdaC "type-2 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
            SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
            EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
            ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
            GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
        Length = 1704

 Score = 193 (73.0 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 64/237 (27%), Positives = 101/237 (42%)

Query:    74 AGGLHHAKKCEASGFCYINDLVLGI--LELLKYHARVLYIDIDVHHGDGVEEAFYFTDRV 131
             AG         + G+C IN++ +G     L   ++R+  +D DVHHG+G +E     D  
Sbjct:  1214 AGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNF 1273

Query:   132 MTVSFHKFGD--LFFPGTG-DVKEIGEREGKFYA--INVPLKDGIDDTSFTRLFKTIISK 186
             + +S H   +   F+PGTG DV +I E  G+F    +N+ LK       F + +   I  
Sbjct:  1274 LFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILNIGLKRNTGSAVFLQQWMNKIIP 1333

Query:   187 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK-------KFNLPLLVTGG 239
              +E Y P  I L  G D    D      L+ + +    + +K       K  +  ++ GG
Sbjct:  1334 RLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRIISVLEGG 1393

Query:   240 GGYTKEN-VARCWTVETGILL-DTELPNEIPENEYIKYFAPECSLRIPNGHIENLNS 294
              G  K N + RC       L+ DT+    +    Y  +F+      IP  +I N  S
Sbjct:  1394 YGIEKTNSLQRCVNSHLKALIEDTDEEIHLANISY-GHFSETQETAIPKFNINNFIS 1449


>MGI|MGI:1333752 [details] [associations]
            symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
            associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
            microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=ISO] [GO:0006886
            "intracellular protein transport" evidence=ISO] [GO:0007026
            "negative regulation of microtubule depolymerization" evidence=IDA]
            [GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
            "microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009636 "response to toxic substance"
            evidence=ISO] [GO:0009967 "positive regulation of signal
            transduction" evidence=ISO] [GO:0010033 "response to organic
            substance" evidence=ISO] [GO:0010469 "regulation of receptor
            activity" evidence=ISO] [GO:0010634 "positive regulation of
            epithelial cell migration" evidence=ISO] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=ISO]
            [GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
            evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
            "histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
            evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=ISO] [GO:0035967 "cellular response to
            topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
            activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
            evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
            complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
            of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
            regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
            [GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
            "response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
            protein binding" evidence=ISO] [GO:0070201 "regulation of
            establishment of protein localization" evidence=IMP] [GO:0070301
            "cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
            "dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
            assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
            deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
            factor stimulus" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=ISO]
            [GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
            GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
            GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
            GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
            HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
            UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
            MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
            PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
            GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
            NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
            GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
        Length = 1149

 Score = 190 (71.9 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 57/256 (22%), Positives = 117/256 (45%)

Query:    78 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 134
             HHA+   A GFC+ N + +     +++   A R+L +D DVHHG+G +  F     V+ V
Sbjct:   609 HHAEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYV 668

Query:   135 SFHKFG-DLFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 190
             S H++    FFP    G   ++G   G  + +NVP     + D  +   +  ++  +   
Sbjct:   669 SLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYE 728

Query:   191 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVAR 249
             + P  +++  G D+  GD LG   ++ +G+A     +       +++   GGY   +++ 
Sbjct:   729 FNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISE 788

Query:   250 CWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENL 309
                  T  LL  + P   P+   ++   P+    +    +  ++ K Y  ++++  +E+ 
Sbjct:   789 SMAACTHSLLG-DPP---PQLTLLR--PPQSGALVSISEVIQVHRK-YWRSLRLMKMEDK 841

Query:   310 RSIQHAPSVQMQEVPP 325
                  +  V ++++PP
Sbjct:   842 EECSSSRLV-IKKLPP 856

 Score = 177 (67.4 bits), Expect = 4.6e-10, P = 4.6e-10
 Identities = 55/194 (28%), Positives = 83/194 (42%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N L +      K H   RVL +D DVHHG G +  F     V+  S
Sbjct:   214 HHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFS 273

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
              H++    F+P     +   IG  +G+ Y INVP    G+ D  +   F  I+  V   +
Sbjct:   274 IHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEF 333

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARC 250
              P  +++  G D+L GD  G    +  G A     +       L+++  GGY    +A+ 
Sbjct:   334 QPQLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAKG 393

Query:   251 WTVETGILLDTELP 264
              +     LL    P
Sbjct:   394 VSASLHTLLGDPCP 407


>UNIPROTKB|Q4K5L2 [details] [associations]
            symbol:PFL_5403 "Histone deacetylase family protein"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
            KEGG:pfl:PFL_5403 PATRIC:19880291
            BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
        Length = 306

 Score = 178 (67.7 bits), Expect = 2.5e-11, P = 2.5e-11
 Identities = 59/202 (29%), Positives = 91/202 (45%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLY 110
             GG++ AA +       +A + AGG HHA     +GFC  NDL +    LL+     RVL 
Sbjct:    97 GGSLLAAEQALEH--GLACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLI 154

Query:   111 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDG 170
              D DVH GDG       T   +TVS H   +  FP         + +  +   ++PL  G
Sbjct:   155 FDCDVHQGDGTARILQHTADAVTVSLHC--EKNFPAR-------KAQSDW---DIPLPMG 202

Query:   171 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE----CVRF 226
             + D  +  +    ++ ++  Y P  ++   G D    D LG   L+  G AE     +R 
Sbjct:   203 MGDADYLNVVDDTLNYLLPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRH 262

Query:   227 VKKFNLPLLVTGGGGYTKENVA 248
                 ++P++   GGGY+K+  A
Sbjct:   263 CLGRDIPVVGVIGGGYSKDRQA 284


>UNIPROTKB|E2RS82 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
            Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
        Length = 550

 Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
 Identities = 50/199 (25%), Positives = 93/199 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:    16 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 75

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G+ +G+ + +N+P    G+ +  +   F  ++  V   +
Sbjct:    76 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEF 135

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG------GGYTKE 245
              P  +++  G DS  GD  G     +    EC   + +  L +L  G       GGY  E
Sbjct:   136 DPELVLVSAGFDSAIGDPEG----QMQATPECFGHLTQL-LQVLAGGRVCAVLEGGYHLE 190

Query:   246 NVARCWTVETGILLDTELP 264
             ++++   +    LL   +P
Sbjct:   191 SLSQSVCMVVRALLGDPVP 209


>UNIPROTKB|Q48DS3 [details] [associations]
            symbol:PSPPH_4352 "Histone deacetylase family protein"
            species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
            STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
            ProtClustDB:CLSK909647 Uniprot:Q48DS3
        Length = 305

 Score = 177 (67.4 bits), Expect = 3.3e-11, P = 3.3e-11
 Identities = 56/187 (29%), Positives = 87/187 (46%)

Query:    69 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARV---LYIDIDVHHGDGVEEAF 125
             +A + AGG HHA     +GFC  NDL + I + L    RV   L  D DVH GDG     
Sbjct:   111 MACHLAGGTHHAHYDYPAGFCIFNDLAV-ISQYLLQSGRVDKVLIFDCDVHQGDGTARIL 169

Query:   126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
               T+  +TVS H   +  FP         + +  +   ++PL  G+ D ++  +   +++
Sbjct:   170 ADTEDAITVSLHC--EKNFPAR-------KAQSDW---DIPLPMGMGDANYLNVVDDLLN 217

Query:   186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHA---ECV-RFVKKFNLPLLVTGGGG 241
              ++  Y P  ++   G D    D LG   L+  G A   E V R     ++P++   GGG
Sbjct:   218 YLLPFYKPDLVLYDAGVDVHKDDALGYLQLTDQGVANRDEAVLRHCLSRDIPVMGVIGGG 277

Query:   242 YTKENVA 248
             Y+K+  A
Sbjct:   278 YSKDRQA 284


>UNIPROTKB|E2RSA8 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
            GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
            Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
        Length = 668

 Score = 184 (69.8 bits), Expect = 3.6e-11, P = 3.6e-11
 Identities = 50/199 (25%), Positives = 93/199 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 193

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G+ +G+ + +N+P    G+ +  +   F  ++  V   +
Sbjct:   194 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG------GGYTKE 245
              P  +++  G DS  GD  G     +    EC   + +  L +L  G       GGY  E
Sbjct:   254 DPELVLVSAGFDSAIGDPEG----QMQATPECFGHLTQL-LQVLAGGRVCAVLEGGYHLE 308

Query:   246 NVARCWTVETGILLDTELP 264
             ++++   +    LL   +P
Sbjct:   309 SLSQSVCMVVRALLGDPVP 327


>UNIPROTKB|Q4KAJ1 [details] [associations]
            symbol:aphA_1 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
            RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
            GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
            ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
            Uniprot:Q4KAJ1
        Length = 342

 Score = 178 (67.7 bits), Expect = 3.9e-11, P = 3.9e-11
 Identities = 44/172 (25%), Positives = 76/172 (44%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHAR-VLYIDIDVHHGDGVEEAFYFTDRVMTVSF 136
             HHA +    G+CY+N+  +     +   AR V  +D+D HHG+G +  FY    V+ VS 
Sbjct:   158 HHAAREYMGGYCYLNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSL 217

Query:   137 HKFGDLFFPG-TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 195
             H    + +P  +G   E G   G+   +N+PL        + +  + +  K +  +AP  
Sbjct:   218 HGDPAVSYPYFSGHASERGSGAGEGCNLNLPLPKNTSWQHYRQALE-LACKQLRAFAPEL 276

Query:   196 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 247
             +V+  G D+   D +  F L  +      + +     P L    GGY  + +
Sbjct:   277 LVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATVGTPTLFVMEGGYMVDEI 328


>UNIPROTKB|Q8EFZ9 [details] [associations]
            symbol:SO_1815 "Histone deacetylase superfamily protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 52/201 (25%), Positives = 89/201 (44%)

Query:    52 AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL---KYHARV 108
             AG ++ AA  L      IA++  GG HHA     SG+C  NDL++   +L+   + H ++
Sbjct:    97 AGTSLTAALALQT---GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLH-KI 152

Query:   109 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 168
             L  D DVH GDG          +++ S H   +  FP          ++   Y  ++ L 
Sbjct:   153 LIFDCDVHQGDGTATLSQLHQGIISCSIHCKDN--FPS--------RKQHSHY--DIELV 200

Query:   169 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG----HAECV 224
              G DD+++    +  +  ++  + P  I+   G D    D LG   +S  G        +
Sbjct:   201 KGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVL 260

Query:   225 RFVKKFNLPLLVTGGGGYTKE 245
                +  N+P+    GGGY+++
Sbjct:   261 SMARAANIPVAAVIGGGYSRD 281


>TIGR_CMR|SO_1815 [details] [associations]
            symbol:SO_1815 "histone deacetylase/AcuC/AphA family
            protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
 Identities = 52/201 (25%), Positives = 89/201 (44%)

Query:    52 AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL---KYHARV 108
             AG ++ AA  L      IA++  GG HHA     SG+C  NDL++   +L+   + H ++
Sbjct:    97 AGTSLTAALALQT---GIALHLTGGYHHAHYEFGSGYCIFNDLIIAARKLIIEQQLH-KI 152

Query:   109 LYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLK 168
             L  D DVH GDG          +++ S H   +  FP          ++   Y  ++ L 
Sbjct:   153 LIFDCDVHQGDGTATLSQLHQGIISCSIHCKDN--FPS--------RKQHSHY--DIELV 200

Query:   169 DGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG----HAECV 224
              G DD+++    +  +  ++  + P  I+   G D    D LG   +S  G        +
Sbjct:   201 KGTDDSAYLDTVEQTLELLIRLHQPDLILYDAGVDIHQDDDLGHLQISQQGLYQRDVTVL 260

Query:   225 RFVKKFNLPLLVTGGGGYTKE 245
                +  N+P+    GGGY+++
Sbjct:   261 SMARAANIPVAAVIGGGYSRD 281


>UNIPROTKB|Q0VD49 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0033558 "protein deacetylase activity" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
            deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
            EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
            Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
            InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
        Length = 670

 Score = 178 (67.7 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 53/202 (26%), Positives = 93/202 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFS 193

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G   G  + +N+P    G+ +  +   F  ++  +   +
Sbjct:   194 WHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAAFLHVLLPLAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTK 244
              P  +++  G DS  GD  G     +    EC  F    +L  ++ GG       GGY  
Sbjct:   254 DPELVLVSAGFDSAIGDPEG----QMLATPEC--FAHLTHLLQVLAGGRVCAVLEGGYHL 307

Query:   245 ENVAR--CWTVETGILLDTELP 264
             E++++  C  V   +L D  LP
Sbjct:   308 ESLSQSVCMMVRA-LLGDPALP 328


>ZFIN|ZDB-GENE-040704-7 [details] [associations]
            symbol:hdac11 "histone deacetylase 11" species:7955
            "Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
            GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
            IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
            ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
            KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
        Length = 366

 Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 58/200 (29%), Positives = 86/200 (43%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +   ++    AIN  GG HH    +  GFC   D+ L I    E ++  A   
Sbjct:   130 GGTIMAGKLAIDR--GWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASAT 187

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG G  K   +R+       V L  
Sbjct:   188 IIDLDAHQGNGHERDFLEDRRVYIMDV--YNRHIYPGDGYAKRAIKRK-------VELDW 238

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 225
             G +D+ + +         +    P  I+   G D L GD LG   +S  G     E + R
Sbjct:   239 GTEDSEYLQKVDLHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFR 298

Query:   226 FVKKFNLPLLVTGGGGYTKE 245
               ++  +P+L+   GGY K+
Sbjct:   299 AARRRGIPILMVTSGGYQKK 318


>UNIPROTKB|A6NGT0 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00642981
            ProteinModelPortal:A6NGT0 SMR:A6NGT0 STRING:A6NGT0
            Ensembl:ENST00000373560 ArrayExpress:A6NGT0 Bgee:A6NGT0
            Uniprot:A6NGT0
        Length = 156

 Score = 152 (58.6 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 27/53 (50%), Positives = 35/53 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCE 84
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK E
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKYE 148


>UNIPROTKB|I3LHJ7 [details] [associations]
            symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 GeneTree:ENSGT00530000062889
            Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
        Length = 51

 Score = 151 (58.2 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 25/45 (55%), Positives = 35/45 (77%)

Query:   132 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSF 176
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 45


>UNIPROTKB|A6ND12 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
            KO:K11405 EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
            GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
            ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00645419
            RefSeq:NP_001159894.1 ProteinModelPortal:A6ND12 SMR:A6ND12
            STRING:A6ND12 PRIDE:A6ND12 Ensembl:ENST00000373556 UCSC:uc022byw.1
            ArrayExpress:A6ND12 Bgee:A6ND12 Uniprot:A6ND12
        Length = 158

 Score = 149 (57.5 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 26/51 (50%), Positives = 34/51 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 82
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146


>UNIPROTKB|A6NJR3 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
            KO:K11405 EMBL:AL133500 EMBL:BX295542 IPI:IPI00515065
            UniGene:Hs.310536 DNASU:55869 GeneID:55869 KEGG:hsa:55869
            HGNC:HGNC:13315 PharmGKB:PA37766 ChiTaRS:HDAC8 GenomeRNAi:55869
            NextBio:61182 RefSeq:NP_001159892.1 ProteinModelPortal:A6NJR3
            SMR:A6NJR3 STRING:A6NJR3 Ensembl:ENST00000373554 UCSC:uc022byx.1
            BindingDB:A6NJR3 ArrayExpress:A6NJR3 Bgee:A6NJR3 Uniprot:A6NJR3
        Length = 146

 Score = 149 (57.5 bits), Expect = 6.1e-10, P = 6.1e-10
 Identities = 26/51 (50%), Positives = 34/51 (66%)

Query:    32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 82
             Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK
Sbjct:    96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146


>UNIPROTKB|H0YH91 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
            ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
        Length = 384

 Score = 168 (64.2 bits), Expect = 7.8e-10, P = 7.8e-10
 Identities = 34/110 (30%), Positives = 60/110 (54%)

Query:   114 DVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID 172
             DVHHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D
Sbjct:   139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198

Query:   173 ----DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 216
                 D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 248


>UNIPROTKB|I3LTU6 [details] [associations]
            symbol:LOC100738481 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:FP700091
            Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
        Length = 275

 Score = 163 (62.4 bits), Expect = 9.6e-10, P = 9.6e-10
 Identities = 49/167 (29%), Positives = 73/167 (43%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   118 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 175

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 169
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   176 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 226

Query:   170 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
               +D  +    +  + K ++ + P  +V   G D L GDRLG  ++S
Sbjct:   227 ATEDDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273


>RGD|1305874 [details] [associations]
            symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
            activity" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
            "nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0014003 "oligodendrocyte development"
            evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
            binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
            "protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
            GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
            GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
            IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
            ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
            Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
            NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
            GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
        Length = 588

 Score = 170 (64.9 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query:    78 HHAKKCEASGFCYINDLVLGILELL-KYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N++ +       KY   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHSQRAAANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 193

Query:   136 FHKF--GDLF-FPGTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++  G+ + F    D   +G   G+ + +N+P    G+ +  +   F  ++  +   +
Sbjct:   194 WHRYEHGNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLG 211
              P  +++  G DS  GD  G
Sbjct:   254 DPELVLVSAGFDSAIGDPEG 273


>FB|FBgn0051119 [details] [associations]
            symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
            melanogaster" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
            RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
            SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
            EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
            UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
            OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
        Length = 343

 Score = 165 (63.1 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 52/184 (28%), Positives = 79/184 (42%)

Query:    70 AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAF 125
             AIN  GG HH       GFC   D+ L I+ L +       R++ +D+D H G+G E  F
Sbjct:   150 AINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF 209

Query:   126 YFTDRVMTVS-FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
                + V  V  F  +    +P     KE            V L++  +D  + R  K  +
Sbjct:   210 ---NNVAAVYIFDMYNAFVYPRDHVAKES-------IRCAVELRNYTEDGFYLRQLKRCL 259

Query:   185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGG 240
              + +  + P  +V   G D L GD LG   +S +G  E  R V    +   +P+++   G
Sbjct:   260 MQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSG 319

Query:   241 GYTK 244
             GY K
Sbjct:   320 GYLK 323


>UNIPROTKB|F1RXT2 [details] [associations]
            symbol:LOC100518786 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:BX321913
            Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
        Length = 677

 Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
 Identities = 50/202 (24%), Positives = 89/202 (44%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S
Sbjct:   134 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 193

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G   G  + +N+P    G+ +  +   F  ++  +   +
Sbjct:   194 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEF 253

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTK 244
                 +++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  
Sbjct:   254 NAELVLVSAGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHL 307

Query:   245 ENVAR--CWTVETGILLDTELP 264
             E++++  C  V+  +L D   P
Sbjct:   308 ESLSQSVCMMVQA-LLGDPAPP 328


>UNIPROTKB|I3LDD6 [details] [associations]
            symbol:LOC100518786 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
            GeneTree:ENSGT00530000062809 EMBL:BX321913
            Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
        Length = 677

 Score = 165 (63.1 bits), Expect = 4.8e-09, P = 4.8e-09
 Identities = 50/202 (24%), Positives = 89/202 (44%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S
Sbjct:   136 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 195

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 191
             +H++    F+P     D   +G   G  + +N+P    G+ +  +   F  ++  +   +
Sbjct:   196 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEF 255

Query:   192 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTK 244
                 +++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  
Sbjct:   256 NAELVLVSAGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHL 309

Query:   245 ENVAR--CWTVETGILLDTELP 264
             E++++  C  V+  +L D   P
Sbjct:   310 ESLSQSVCMMVQA-LLGDPAPP 330


>TIGR_CMR|SPO_0250 [details] [associations]
            symbol:SPO_0250 "histone deacetylase family protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
            RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
            KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
            Uniprot:Q5LX39
        Length = 308

 Score = 152 (58.6 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 43/155 (27%), Positives = 67/155 (43%)

Query:    64 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGV 121
             N  C  AI   G  HHA++  A GFC   +  L     L +H   RV  +D DVHHG+G 
Sbjct:   111 NAFC--AIRPPG--HHAERETAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGT 166

Query:   122 EEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFK 181
             ++  +   R + ++  +     +PG+G   E G   G+   +N+PL  G         + 
Sbjct:   167 QDLLWDEARALLITSQQMP--LWPGSGRPDEDGAH-GQI--VNIPLAPGTGGAEMRAAYM 221

Query:   182 TIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
                   +  + P  I++  G D+   D L   N S
Sbjct:   222 AQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWS 256


>DICTYBASE|DDB_G0279267 [details] [associations]
            symbol:hdaD "type-2 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
            EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
            ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
            KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
        Length = 1489

 Score = 123 (48.4 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
 Identities = 28/73 (38%), Positives = 40/73 (54%)

Query:    85 ASGFCYINDLVLGI-LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 142
             + GFC +N + +G     LKY+  ++  ID DVHHG+G EE          +S H F + 
Sbjct:  1244 SQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG 1303

Query:   143 FFPGTGD-VKEIG 154
             F+PG+G  V  IG
Sbjct:  1304 FYPGSGGGVGSIG 1316

 Score = 87 (35.7 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query:   163 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 222
             +N+PL      +SF + F  II K+ + Y P  I++ CG D+   D L    L  + + E
Sbjct:  1386 VNIPLDPKSSASSFLKAFSIIIDKLND-YQPELILISCGFDAHMEDHLASLCLLEENYVE 1444

Query:   223 CVRFVKK 229
               R +++
Sbjct:  1445 ITRSLRR 1451


>UNIPROTKB|B5MCQ6 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
            ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
            ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
        Length = 268

 Score = 148 (57.2 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 47/159 (29%), Positives = 74/159 (46%)

Query:    90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
             Y+N+L   + E ++  +R   ID+D H G+G E  F    RV  +    +    +PG   
Sbjct:    79 YLNELKF-LFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRF 135

Query:   150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
              K+   R+       V L+ G +D  +    +  I K ++ + P  +V   G D L GDR
Sbjct:   136 AKQAIRRK-------VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDR 188

Query:   210 LGCFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGYTK 244
             LG  ++S  G     E V R V+   +P+L+   GGY K
Sbjct:   189 LGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQK 227


>UNIPROTKB|E5RG37 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00976554 ProteinModelPortal:E5RG37 SMR:E5RG37
            Ensembl:ENST00000523628 ArrayExpress:E5RG37 Bgee:E5RG37
            Uniprot:E5RG37
        Length = 103

 Score = 131 (51.2 bits), Expect = 5.6e-08, P = 5.6e-08
 Identities = 23/44 (52%), Positives = 32/44 (72%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA 70
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A
Sbjct:    60 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 103


>UNIPROTKB|I3L961 [details] [associations]
            symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
            Uniprot:I3L961
        Length = 606

 Score = 153 (58.9 bits), Expect = 8.8e-08, P = 8.8e-08
 Identities = 35/141 (24%), Positives = 66/141 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S
Sbjct:    90 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 149

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF-KTIISKVVET 190
             +H++    F+P     D   +G   G  + +N+P    G+ +  +   F + ++  +   
Sbjct:   150 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 209

Query:   191 YAPGAIVLQCGADSLAGDRLG 211
             +    +++  G DS  GD  G
Sbjct:   210 FNAELVLVSAGFDSAIGDSEG 230


>UNIPROTKB|I3LKB5 [details] [associations]
            symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
            Uniprot:I3LKB5
        Length = 621

 Score = 153 (58.9 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 35/141 (24%), Positives = 66/141 (46%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S
Sbjct:   104 HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFS 163

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF-KTIISKVVET 190
             +H++    F+P     D   +G   G  + +N+P    G+ +  +   F + ++  +   
Sbjct:   164 WHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPLAFE 223

Query:   191 YAPGAIVLQCGADSLAGDRLG 211
             +    +++  G DS  GD  G
Sbjct:   224 FNAELVLVSAGFDSAIGDSEG 244


>UNIPROTKB|E5RH52 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00980006 ProteinModelPortal:E5RH52 SMR:E5RH52
            Ensembl:ENST00000521610 ArrayExpress:E5RH52 Bgee:E5RH52
            Uniprot:E5RH52
        Length = 100

 Score = 123 (48.4 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 21/39 (53%), Positives = 29/39 (74%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 65
             K  + +N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    60 KQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 98


>UNIPROTKB|C9J8B8 [details] [associations]
            symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
            HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
            SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
        Length = 619

 Score = 143 (55.4 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
 Identities = 30/109 (27%), Positives = 54/109 (49%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HH ++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:   134 HHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFS 193

Query:   136 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF 180
             +H++    F+P     D   +G  +G  + +N+P    G+ +  +   F
Sbjct:   194 WHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242

 Score = 46 (21.3 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query:   219 GHAECVRFVKKFNLPLLVTGGGGYTKENVAR--CWTVETGILLDTELP 264
             G+A+ V       LPL   GG  Y  E++A   C TV+T +L D   P
Sbjct:   234 GNADYVAAFLHLLLPLAFEGG--YHLESLAESVCMTVQT-LLGDPAPP 278


>UNIPROTKB|E7EUZ1 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
            HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
            ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
            UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
        Length = 296

 Score = 125 (49.1 bits), Expect = 3.2e-05, P = 3.2e-05
 Identities = 34/116 (29%), Positives = 52/116 (44%)

Query:    78 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 135
             HHA+     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S
Sbjct:   160 HHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFS 219

Query:   136 FHKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKV 187
              H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V
Sbjct:   220 IHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPV 275


>UNIPROTKB|E1BQQ2 [details] [associations]
            symbol:Gga.27678 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
            Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
        Length = 218

 Score = 117 (46.2 bits), Expect = 0.00011, P = 0.00011
 Identities = 28/101 (27%), Positives = 53/101 (52%)

Query:    43 NLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGI-L 99
             N +   ++  G  +      ++ ++C+ +A+    G HH+++  A+GFC  N++ +    
Sbjct:   100 NTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAANGFCLFNNVAIAAEY 158

Query:   100 ELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 139
               LKY   R+L +D DVHHG G +  F     V+  S+H++
Sbjct:   159 AKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRY 199


>UNIPROTKB|B5MCV5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
            ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
            Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
            Bgee:B5MCV5 Uniprot:B5MCV5
        Length = 204

 Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
 Identities = 34/108 (31%), Positives = 47/108 (43%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   110 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGERE 157
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+
Sbjct:   149 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK 194


>UNIPROTKB|E5RHE7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00979387 ProteinModelPortal:E5RHE7 SMR:E5RHE7
            Ensembl:ENST00000522371 ArrayExpress:E5RHE7 Bgee:E5RHE7
            Uniprot:E5RHE7
        Length = 86

 Score = 97 (39.2 bits), Expect = 0.00028, P = 0.00028
 Identities = 16/27 (59%), Positives = 21/27 (77%)

Query:    27 KPHRLYNLGEDCPVFENLFEFCQIYAG 53
             K  + +N+GEDCPVF+ LFEFCQ+  G
Sbjct:    60 KQMQRFNVGEDCPVFDGLFEFCQLSTG 86


>UNIPROTKB|E5RFP9 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00974336 ProteinModelPortal:E5RFP9 SMR:E5RFP9
            Ensembl:ENST00000521163 ArrayExpress:E5RFP9 Bgee:E5RFP9
            Uniprot:E5RFP9
        Length = 109

 Score = 96 (38.9 bits), Expect = 0.00036, P = 0.00036
 Identities = 17/35 (48%), Positives = 23/35 (65%)

Query:     4 KDKISYFYD-------GDVGSVYFGPNHPMKPHRL 31
             K K+ Y+YD       GD+G+ Y+G  HPMKPHR+
Sbjct:     9 KKKVCYYYDVCVFSILGDIGNYYYGQGHPMKPHRI 43


>UNIPROTKB|F5H6R5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
            ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
            UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
        Length = 155

 Score = 105 (42.0 bits), Expect = 0.00045, P = 0.00045
 Identities = 33/97 (34%), Positives = 48/97 (49%)

Query:   154 GEREGKFYAIN--VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
             G+R  K  AI   V L+ G +D  +    +  I K ++ + P  +V   G D L GDRLG
Sbjct:    19 GDRFAK-QAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLG 77

Query:   212 CFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGYTK 244
               ++S  G     E V R V+   +P+L+   GGY K
Sbjct:    78 GLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQK 114


>UNIPROTKB|C9JEC8 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
            SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
            ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
        Length = 166

 Score = 107 (42.7 bits), Expect = 0.00046, P = 0.00046
 Identities = 28/76 (36%), Positives = 36/76 (47%)

Query:    53 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 109
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   110 YIDIDVHHGDGVEEAF 125
              ID+D H G+G E  F
Sbjct:   149 IIDLDAHQGNGHERDF 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.141   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      371       371   0.00086  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  224
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  267 KB (2141 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  32.15u 0.15s 32.30t   Elapsed:  00:00:01
  Total cpu time:  32.18u 0.15s 32.33t   Elapsed:  00:00:01
  Start:  Sat May 11 14:32:03 2013   End:  Sat May 11 14:32:04 2013
WARNINGS ISSUED:  1
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with HDA9 HDA9 HDA9 AT3G44680	protein from Arabidopsis thaliana	2.5e-186
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Bos taurus	7.2e-133
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	protein from Mus musculus	9.2e-133
BLAST match view associations BLAST with Hdac1l Hdac1l Hdac1l histone deacetylase 1-like	gene from Rattus norvegicus	9.2e-133
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Uncharacterized protein	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	8.2e-132
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Gallus gallus	2.0e-130
BLAST match view associations BLAST with LOC100622482 LOC100622482 LOC100622482 Histone deacetylase	protein from Sus scrofa	1.3e-129
BLAST match view associations BLAST with hdac1 hdac1 hdac1 histone deacetylase 1	gene_product from Danio rerio	4.3e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Gallus gallus	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	5.5e-128
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Sus scrofa	5.5e-128
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Strongylocentrotus purpuratus	7.0e-128
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	protein from Mus musculus	1.5e-127
BLAST match view associations BLAST with hdaA hdaA hdaA type-1 histone deacetylase	gene from Dictyostelium discoideum	3.8e-127
BLAST match view associations BLAST with HD1 HD1 HD1 AT4G38130	protein from Arabidopsis thaliana	1.9e-125
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	2.4e-125
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Gallus gallus	3.9e-125
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Gallus gallus	1.3e-124
BLAST match view associations BLAST with Rpd3 Rpd3 Rpd3	protein from Drosophila melanogaster	1.3e-124
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	protein from Mus musculus	1.5e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	gene from Rattus norvegicus	1.5e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Rattus norvegicus	1.5e-123
BLAST match view associations BLAST with hdaB hdaB hdaB type-1 histone deacetylase	gene from Dictyostelium discoideum	2.4e-123
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Gallus gallus	2.4e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Canis lupus familiaris	3.1e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	3.1e-123
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Sus scrofa	3.1e-123
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Drosophila melanogaster	2.2e-122
BLAST match view associations BLAST with hdac3 hdac3 hdac3 histone deacetylase 3	gene_product from Danio rerio	1.5e-121
BLAST match view associations BLAST with LOC100521667 LOC100521667 LOC100521667 Histone deacetylase	protein from Sus scrofa	6.6e-121
BLAST match view associations BLAST with RPD31 RPD31 RPD31	gene_product from Candida albicans	7.3e-121
BLAST match view associations BLAST with RPD31 RPD31 RPD31 Potential Sin3.Rpd3 histone deacetylase complex component Rpd3p	protein from Candida albicans SC5314	7.3e-121
BLAST match view associations BLAST with hda-1 hda-1 hda-1	gene from Caenorhabditis elegans	3.2e-119
BLAST match view associations BLAST with hda-1 hda-1 hda-1 Histone deacetylase 1	protein from Caenorhabditis elegans	3.2e-119
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	8.8e-118
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Homo sapiens	8.8e-118
BLAST match view associations BLAST with HDA6 HDA6 HDA6 AT5G63110	protein from Arabidopsis thaliana	2.3e-116
BLAST match view associations BLAST with hda-3 hda-3 hda-3	gene from Caenorhabditis elegans	6.0e-116
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Bos taurus	9.8e-116
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	gene from Saccharomyces cerevisiae	7.0e-113
BLAST match view associations BLAST with RPD3 RPD3 RPD3	gene_product from Candida albicans	2.3e-112
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	protein from Candida albicans SC5314	2.3e-112
BLAST match view associations BLAST with F1M4V8 F1M4V8 F1M4V8 Histone deacetylase	protein from Rattus norvegicus	5.0e-108
BLAST match view associations BLAST with HOS2 HOS2 HOS2	gene_product from Candida albicans	4.0e-104
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase	protein from Candida albicans SC5314	4.0e-104
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase and subunit of Set3 and Rpd3L complexes	gene from Saccharomyces cerevisiae	1.1e-101
BLAST match view associations BLAST with hda-2 hda-2 hda-2	gene from Caenorhabditis elegans	2.6e-98
BLAST match view associations BLAST with HDA7 HDA7 HDA7 AT5G35600	protein from Arabidopsis thaliana	2.1e-92
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.7e-80
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.6e-73
BLAST match view associations BLAST with hdac8 hdac8 hdac8 histone deacetylase 8	gene_product from Danio rerio	1.8e-72
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Gallus gallus	7.7e-71
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	9.9e-71
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	protein from Mus musculus	1.6e-70
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	gene from Rattus norvegicus	1.6e-70
BLAST match view associations BLAST with hda17 hda17 hda17 histone deacetylase 17	protein from Arabidopsis thaliana	4.3e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	7.0e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Bos taurus	8.9e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Bos taurus	8.0e-69
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	1.2e-67
BLAST match view associations BLAST with hda10 hda10 hda10 histone deacetylase 10	protein from Arabidopsis thaliana	9.3e-59
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	gene from Rattus norvegicus	1.2e-58
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.8e-58
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	6.9e-55
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.1e-54
BLAST match view associations BLAST with GSU1222 GSU1222 GSU1222 Histone deacetylase family protein	protein from Geobacter sulfurreducens PCA	7.8e-54
BLAST match view associations BLAST with GSU_1222 GSU_1222 GSU_1222 histone deacetylase/AcuC/AphA family protein	protein from Geobacter sulfurreducens PCA	7.8e-54
BLAST match view associations BLAST with HOS1 HOS1 HOS1	gene_product from Candida albicans	1.1e-46
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Likely histone deacetylase Hos1p	protein from Candida albicans SC5314	1.1e-46
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.9e-46
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Uncharacterized protein	protein from Sus scrofa	1.3e-45
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.1e-45
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Class I histone deacetylase (HDAC) family member	gene from Saccharomyces cerevisiae	8.4e-42
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	8.2e-37
BLAST match view associations BLAST with CHY_0174 CHY_0174 CHY_0174 acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	8.2e-37
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	8.2e-37
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Bacillus anthracis	2.7e-36
BLAST match view associations BLAST with BA_4918 BA_4918 BA_4918 acetoin utilization protein AcuC	protein from Bacillus anthracis str. Ames	2.7e-36
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.2e-36
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Uncharacterized protein	protein from Bos taurus	1.5e-33
BLAST match view associations BLAST with LOC100625846 LOC100625846 LOC100625846 Uncharacterized protein	protein from Sus scrofa	6.0e-32
BLAST match view associations BLAST with SPO_2177 SPO_2177 SPO_2177 acetoin utilization protein AcuC	protein from Ruegeria pomeroyi DSS-3	2.0e-31
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.9e-25
BLAST match view associations BLAST with HDA1 HDA1 HDA1	gene_product from Candida albicans	1.0e-24
BLAST match view associations BLAST with HDA1 HDA1 HDA1 Likely class II histone deacetylase subunit Hda1p	protein from Candida albicans SC5314	1.0e-24
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.4e-24
BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	1.1e-22
BLAST match view associations BLAST with HDA15 HDA15 HDA15 AT3G18520	protein from Arabidopsis thaliana	2.5e-22
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	gene from Rattus norvegicus	9.0e-22
BLAST match view associations BLAST with HDA08 HDA08 HDA08 AT1G08460	protein from Arabidopsis thaliana	6.0e-20
BLAST match view associations BLAST with aphA_2 aphA_2 aphA_2 Acetylpolyamine aminohydrolase	protein from Pseudomonas protegens Pf-5	1.2e-19