BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017484
(371 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 667 bits (1722), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/424 (77%), Positives = 353/424 (83%), Gaps = 58/424 (13%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRLY---- 32
MRSKDKISYFYDGDVGSVYFGPNHPMK PH+ Y
Sbjct: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60
Query: 33 ------------------------------NLGEDCPVFENLFEFCQIYAGGTIDAARRL 62
NLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61 AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120
Query: 63 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 122
NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180
Query: 123 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 182
EAFYFTDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT 240
Query: 183 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 242
IISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY 300
Query: 243 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIK 302
TKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK
Sbjct: 301 TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIK 360
Query: 303 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGD 362
+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R DQ ++DKQIQRDDE+++GD
Sbjct: 361 VQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGD 420
Query: 363 NDND 366
NDND
Sbjct: 421 NDND 424
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/423 (52%), Positives = 290/423 (68%), Gaps = 60/423 (14%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
+ ENLR + HAP VQMQ +P D DE+E++P++R+ DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSED 425
Query: 364 DND 366
+ +
Sbjct: 426 EGE 428
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 264/382 (69%), Gaps = 59/382 (15%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD 326
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 216/423 (51%), Positives = 290/423 (68%), Gaps = 60/423 (14%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVM+VSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
+KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT
Sbjct: 246 TKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
+ ENLR + HAP VQMQ +P D + +EDE++PD+R+ + DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEFSDSED 425
Query: 364 DND 366
+ +
Sbjct: 426 EGE 428
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 264/382 (69%), Gaps = 59/382 (15%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD 326
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 264/382 (69%), Gaps = 59/382 (15%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD 326
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/382 (54%), Positives = 264/382 (69%), Gaps = 59/382 (15%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
++ K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD 326
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 209/382 (54%), Positives = 264/382 (69%), Gaps = 59/382 (15%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
++ K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD 326
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 224/424 (52%), Positives = 288/424 (67%), Gaps = 61/424 (14%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K ++ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ L+EFCQ+ +GG++ A +LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ ++FK I+
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT
Sbjct: 245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET L E+ NE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTR 364
Query: 305 VLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDE-QNPDERMDQHTQDKQIQRDDEFYEGD 362
+ EN+R I HAP VQMQ +P D + D EDE +NPD+R+ QDK+IQRDDEF + +
Sbjct: 365 LYENMRMIPHAPGVQMQPIPEDAIPDDSDAEDEAENPDKRISIMAQDKRIQRDDEFSDSE 424
Query: 363 NDND 366
++ +
Sbjct: 425 DEGE 428
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/422 (52%), Positives = 285/422 (67%), Gaps = 60/422 (14%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL-------- 31
K K+ Y+YDGD+G+ Y+G HPMK PH+
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 32 --------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 65
+N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 66 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 125
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 245
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 246 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 305
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 306 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 364
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 365 ND 366
+
Sbjct: 428 GE 429
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 205/337 (60%), Positives = 260/337 (77%), Gaps = 5/337 (1%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++YA+NVPL+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVVDYYQPTCIVLQCGADSLGRDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV +VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +E
Sbjct: 268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDEAISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D +
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSD--LL 385
Query: 331 EFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
+D DE +P+ER + + + +EFY+GD+DND
Sbjct: 386 SYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 434 bits (1116), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/422 (51%), Positives = 284/422 (67%), Gaps = 60/422 (14%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL-------- 31
K K+ Y+YDGD+G+ Y+G HPMK PH+
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 32 --------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 65
+N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 66 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 125
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 245
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV K FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIR 307
Query: 246 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 305
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 306 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 364
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 365 ND 366
+
Sbjct: 428 GE 429
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/336 (60%), Positives = 257/336 (76%), Gaps = 3/336 (0%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLY+DID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +I +V++ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV++VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +E
Sbjct: 268 CFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPSDILSY 387
Query: 331 EFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E DE +P+ER + + + +EFY+GD+DND
Sbjct: 388 E-RTDEPDPEERGSEDNYSRP-EASNEFYDGDHDND 421
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 214/423 (50%), Positives = 284/423 (67%), Gaps = 60/423 (14%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
SK ++ Y+YD D+G+ Y+G HPMK PH+
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N+PL+DG+DD ++ +F II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NV+RCWT ET + L E+ NE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNR 363
Query: 305 VLENLRSIQHAPSVQMQEVPPDFYIPE-FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
+ ENLR + HAP VQ+Q +P D E DED+ + D+R+ Q +DK+I ++E+ + ++
Sbjct: 364 LFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSDSED 423
Query: 364 DND 366
+ +
Sbjct: 424 EGE 426
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 432 bits (1110), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/421 (51%), Positives = 277/421 (65%), Gaps = 61/421 (14%)
Query: 5 DKISYFYDGDVGSVYFGPNHP------------------------MKPHR---------- 30
++ SYFYD DVG+ ++G HP KP++
Sbjct: 3 NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 31 ------------------------LYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 66
+N+G+DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 67 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 126
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 127 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 186
TDRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242
Query: 187 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 246
VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRN 302
Query: 247 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQV 305
VARCWT ET +LL+ + +E+P +EY +YFAP+ +L + IEN NS+ YL I+ V
Sbjct: 303 VARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362
Query: 306 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 365
ENL+ + HAPSVQ+ +VP D E + DE +PDER + + + +EFY+GD+DN
Sbjct: 363 FENLKMLNHAPSVQIHDVPSDMLNYERN-DEPDPDERGAEENYTRP-EAANEFYDGDHDN 420
Query: 366 D 366
D
Sbjct: 421 D 421
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/340 (59%), Positives = 256/340 (75%), Gaps = 11/340 (3%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV +VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +E
Sbjct: 268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-- 328
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTY 387
Query: 329 --IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E D +E+ P+E + + +EFY+GD+DND
Sbjct: 388 DRTDEADAEERGPEENY------SRPEAPNEFYDGDHDND 421
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 431 bits (1107), Expect = e-120, Method: Compositional matrix adjust.
Identities = 203/340 (59%), Positives = 256/340 (75%), Gaps = 11/340 (3%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV +VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +E
Sbjct: 268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-- 328
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTY 387
Query: 329 --IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E D +E+ P+E + + +EFY+GD+DND
Sbjct: 388 DRTDEADAEERGPEENY------SRPEAPNEFYDGDHDND 421
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 202/325 (62%), Positives = 259/325 (79%), Gaps = 9/325 (2%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
+ +++GEDCPVF L+++C IY+GG+I+ A +LN+++ DIAINW+GGLHHA+K EASGFC
Sbjct: 95 KRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFC 154
Query: 90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
Y+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EAFY TDRVMTVSFHKFG FFPGTGD
Sbjct: 155 YVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGD 214
Query: 150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
+ EIG + GK Y++NVPL DGIDD ++ +FK +I V++ Y P IVLQCGADSL DR
Sbjct: 215 IDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVIQGVMDYYRPSVIVLQCGADSLRFDR 274
Query: 210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
LGCFNL+I GHAECVRFVK FN+P LV GGGGYT NVARCWT ET + +DTE+ NE+P
Sbjct: 275 LGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTVRNVARCWTYETSVCVDTEVNNELPY 334
Query: 270 NEYIKYFAPECSLRIPNG-----HIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP 324
N+YI++++P+ L IP+ EN N+KSYL ++++++LENLR +Q APSVQ+Q+VP
Sbjct: 335 NDYIQFYSPDFQL-IPDYTGLPFKYENANTKSYLESLRIKILENLRILQWAPSVQIQDVP 393
Query: 325 PDFYIPEFDEDE---QNPDERMDQH 346
PD +FD DE +N D+R +H
Sbjct: 394 PDIMPIDFDRDEDSKENMDKRKKKH 418
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 429 bits (1104), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/340 (59%), Positives = 256/340 (75%), Gaps = 11/340 (3%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV +VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +E
Sbjct: 268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-- 328
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+ +VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLLTY 387
Query: 329 --IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E D +E+ P+E + + +EFY+GD+DND
Sbjct: 388 DRTDEADAEERGPEENY------SRPEAPNEFYDGDHDND 421
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 203/336 (60%), Positives = 255/336 (75%), Gaps = 3/336 (0%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A LNN+ CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +I +V++ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVIDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV++VK FN+PLLV GGGGYT NVARCWT ET +L+D + E+P +E
Sbjct: 268 CFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVDETISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
Y +YFAP+ +L + IEN NS+ YL I+ V E+L+ + HAPSVQ+ +VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTVFESLKMLNHAPSVQIHDVPSDILNY 387
Query: 331 EFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E DE +P+ER + + + +EFY+GD+DND
Sbjct: 388 E-RTDEPDPEERGGEDNYSRP-EASNEFYDGDHDND 421
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 427 bits (1098), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/340 (59%), Positives = 256/340 (75%), Gaps = 11/340 (3%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF LFEFC Y G ++ A +LNN++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV +VK FN+PLLV GGGGYT NVARCWT ET +L++ + E+P +E
Sbjct: 268 CFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY-- 328
Y +YFAP+ +L + IEN NS+ YL I+ + ENL+ + HAPSVQ+++VP
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIRDVPAGLLTY 387
Query: 329 --IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E D +E+ P+E + + +EFY+GD+DND
Sbjct: 388 DRTDEADAEERGPEENY------SRPEAPNEFYDGDHDND 421
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 198/339 (58%), Positives = 253/339 (74%), Gaps = 5/339 (1%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q DIAINW GGLHHAKK EASGFCY
Sbjct: 98 FNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYT 157
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAFY TDRVMTVSFHK+GD FFPGTGD+K
Sbjct: 158 NDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGD-FFPGTGDLK 216
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+IG +GK Y++NVPL+DGI D S+ +FK I++KV+E + P A+VLQCGADSL GDRLG
Sbjct: 217 DIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLG 276
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FNL++ GH EC RF + +N+PL++ GGGGYT NVARCWT ET I +D E+PNE+P N+
Sbjct: 277 PFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPRNVARCWTYETSIAVDKEVPNELPYND 336
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
Y +YF P L I + + N NS L+ ++ V+ NL + PSVQM+ +P D
Sbjct: 337 YFEYFGPNYRLHIESSNAANENSSDMLAKLQTDVIANLEQLTFVPSVQMRPIPEDALSAL 396
Query: 332 FDE----DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
D+ D+ NPD+R+ D IQ D +FY+G+ + D
Sbjct: 397 NDDSLIADQANPDKRLPPQITDGMIQDDGDFYDGEREGD 435
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 201/336 (59%), Positives = 256/336 (76%), Gaps = 3/336 (0%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G DCPVF LFEFC Y G ++ A +LN+++CDIAINWAGGLHHAKK EASGFCY+
Sbjct: 88 FNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKICDIAINWAGGLHHAKKFEASGFCYV 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY TDRVMTVSFHK+G+ FFPGTGD+
Sbjct: 148 NDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFYLTDRVMTVSFHKYGNYFFPGTGDMY 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E+G G++Y +NVPL+DGIDD S+ +LF+ +I +VV+ Y P IVLQCGADSL DRLG
Sbjct: 208 EVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQVVDFYQPTCIVLQCGADSLGCDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLSI GH ECV FVK F +PLLV GGGGYT NVARCWT ET +L++ + +E+P +E
Sbjct: 268 CFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRNVARCWTFETSLLVEESISDELPYSE 327
Query: 272 YIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 330
Y +YFAP+ +L + IEN NS+ YL I+ V ENL+ + HAPSVQ+++VP D
Sbjct: 328 YFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTVFENLKMLNHAPSVQIRDVPSDLLSY 387
Query: 331 EFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
E DE +P+ER + + + +EFY+GD+D+D
Sbjct: 388 E-RPDEADPEERGSEENFSRP-EAANEFYDGDHDHD 421
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 197/334 (58%), Positives = 265/334 (79%), Gaps = 1/334 (0%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+ EDCPVF+ ++ FCQI +GG+I A ++N++ D+AINWAGGLHHAKK EASGFCY
Sbjct: 89 FNVREDCPVFDGMYNFCQISSGGSIGCAVKVNSKESDVAINWAGGLHHAKKSEASGFCYT 148
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+VL ILELLK+H RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+GD +FPGTGDVK
Sbjct: 149 NDIVLSILELLKHHERVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGD-YFPGTGDVK 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+IG +GK+Y++N PLKDGIDD S+ +F+ II V++ Y PGA+V+QCGADSL GDRLG
Sbjct: 208 DIGADKGKYYSLNFPLKDGIDDESYQSIFRPIIRSVMDFYRPGAVVIQCGADSLTGDRLG 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNL++ GHA+C+ F+K FN+PL+V GGGGYT +NVARCWT ET IL+D+EL +E+P N+
Sbjct: 268 CFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTIKNVARCWTYETSILVDSELKDELPYND 327
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
Y++Y+ PE L I ++EN N+K YL +K+Q+LENLR++ HAP+ ++PPD +
Sbjct: 328 YLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQLLENLRNLNHAPAAAHHDIPPDSFNYS 387
Query: 332 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 365
DED+++PD R+ + +DK++ E + D ++
Sbjct: 388 DDEDDEDPDVRISEADRDKKVHHQGELSDSDEED 421
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 252/313 (80%), Gaps = 1/313 (0%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
+ +N+GEDCPVF+ L+ FCQ YAGG++ + +LN+ LCDIAINWAGGLHHAKKCEASGFC
Sbjct: 100 KRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFC 159
Query: 90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
Y+ND+VL ILELLK H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHKFGD +FPGTG
Sbjct: 160 YVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGD-YFPGTGH 218
Query: 150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
+++IG GK+Y++NVPL DGIDD S+ LFK I+ KV+E + PGA+VLQCGADSL+GDR
Sbjct: 219 IQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDR 278
Query: 210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
LGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT NVARCW ETG+ L E+ +++PE
Sbjct: 279 LGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPE 338
Query: 270 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
+EY +YF P+ +L + ++EN NS+ L I+ +L NL +QHAPSV QE PPD
Sbjct: 339 HEYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTET 398
Query: 330 PEFDEDEQNPDER 342
PE DED+++ D+R
Sbjct: 399 PEVDEDQEDGDKR 411
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/423 (51%), Positives = 288/423 (68%), Gaps = 60/423 (14%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL------- 31
+K K+ Y+YDGDVG+ Y+G HPMK PH+
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66
Query: 32 ---------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 64
+N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 65 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 124
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 125 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 184
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N L+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVM 245
Query: 185 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 244
SKV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLPLL+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTI 305
Query: 245 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 304
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 305 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 363
+ ENLR + HAP VQMQ V D + +EDE +PD+R+ + DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQAVAEDSIHDDSGEEDEDDPDKRISIRSSDKRIACDEEFSDSED 425
Query: 364 DND 366
+ +
Sbjct: 426 EGE 428
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 419 bits (1078), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/422 (51%), Positives = 279/422 (66%), Gaps = 60/422 (14%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMK------------------------PHRL-------- 31
K K+ Y+YDGD+G+ Y+G HPMK PH+
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 32 --------------------------YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 65
+N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 66 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 125
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
Y TDRVMTVS + FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSEVSMVN-NFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 245
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 246 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 305
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 306 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 364
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 365 ND 366
+
Sbjct: 428 GE 429
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 205/400 (51%), Positives = 262/400 (65%), Gaps = 59/400 (14%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRL---------YNL-------------------- 34
K K+SYFYD DVG+ ++GP HPMKPHR+ YNL
Sbjct: 5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64
Query: 35 -----------------------------GEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 65
G+DCPVF+ L+EFC I AGG+I AA+ LN+
Sbjct: 65 HTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSG 124
Query: 66 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 125
+IAINWAGGLHHAKK EASGFCY+ND+ L LELLKYH RVLYIDIDVHHGDGVEE F
Sbjct: 125 NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFF 184
Query: 126 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 185
Y TDRVMT SFHKFG+ +FPGTG +K+ G GK YA+NVPL+DGIDD S+ +FK +IS
Sbjct: 185 YTTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243
Query: 186 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 245
+++ + P A++LQCG DSLAGDRLGCFNLS+ GH+ CV FVK FNLP++ GGGGYT
Sbjct: 244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303
Query: 246 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 305
NVAR WT ETG+L EL +P N+Y++Y+ P+ L + + ++EN N++ YL +I ++
Sbjct: 304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEI 363
Query: 306 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 345
+ENLR++ APSVQM + P DF ++ +E MD+
Sbjct: 364 IENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDE 403
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 411 bits (1057), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/338 (58%), Positives = 249/338 (73%), Gaps = 10/338 (2%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
R +N+GEDCPVF+ LF+FC+ AGG+I AA +LN Q DIAINW GGLHHAKK EASGFC
Sbjct: 104 RRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFC 163
Query: 90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
Y+ND+VLGILELLK RVLYIDIDVHHGDGVEEAFY TDRVMTVSFHKFGD FFPGTG
Sbjct: 164 YVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGH 222
Query: 150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
++++G +GK+YA+NVPL DG+DD SF LF+ +I KV+E Y P A+VLQCGADSL+GDR
Sbjct: 223 IRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDR 282
Query: 210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
LGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT NVARCW ET + + E N++P
Sbjct: 283 LGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPY 342
Query: 270 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
NEY +YF P+ +L + +ENLN+ + I+ +LE L + HAPSVQ Q PP +
Sbjct: 343 NEYFEYFGPDYTLHVDPSPMENLNTPKDMERIRNTLLEQLSGLIHAPSVQFQHTPPVNRV 402
Query: 330 PEFDEDEQNPDERMDQHTQDK-QIQRDDEFYEGDNDND 366
+ ED D T+ K +I YE D+D+D
Sbjct: 403 LDEPED--------DMETRPKPRIWSGTATYESDSDDD 432
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 180/331 (54%), Positives = 243/331 (73%), Gaps = 4/331 (1%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF+ L+E+C I GG+++ A RLN CD+A+N+AGGLHHAKK EASGFCY+
Sbjct: 104 FNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRGKCDVAVNYAGGLHHAKKSEASGFCYL 163
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAFY TDRVMT SFHK+G+ FFPGTG+++
Sbjct: 164 NDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKYGE-FFPGTGELR 222
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+IG GK YA+NVPL+DGIDD ++ +F+ +I K++E Y P A+VLQCG DSL+GDRLG
Sbjct: 223 DIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGDRLG 282
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
CFNLS++GHA CV +VK F +P++V GGGGYT NVAR W ETG+L + L ++P NE
Sbjct: 283 CFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMRNVARTWCFETGLLNNVVLDKDLPYNE 342
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP---PDFY 328
Y +Y+ P+ L + ++ N+N+ YL + + NL + ++APSVQ+ P D
Sbjct: 343 YYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNIFANLENTKYAPSVQLNHTPRDAEDLG 402
Query: 329 IPEFDEDEQNPDERMDQHTQDKQIQRDDEFY 359
E D E + Q+ +D ++ D+EFY
Sbjct: 403 DVEEDSAEAKDTKGGSQYARDLHVEHDNEFY 433
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/300 (61%), Positives = 235/300 (78%), Gaps = 6/300 (2%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
+ +N+GE+CPV + L+ FCQ YAG ++ A + N+ DIAINW+GGLHHAKKCEASGFC
Sbjct: 106 KRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNHGH-DIAINWSGGLHHAKKCEASGFC 164
Query: 90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
Y+ND+VL ILELLK+H RVLY+DID+HHGDGVEEAFY TDRVMTVSFHKFGD +FPGTGD
Sbjct: 165 YVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD-YFPGTGD 223
Query: 150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
+++IG +GK+Y++NVPL DGIDD S+ LFK I+ KV+E + PGA+VLQCGADSL+GDR
Sbjct: 224 IRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDR 283
Query: 210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
LGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT NVARCW ETG+ L E +++P
Sbjct: 284 LGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPV 343
Query: 270 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYI 329
NEY +YF P+ +L + ++EN N++ L I+ + L ++HAPSV QE PD I
Sbjct: 344 NEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSK----LSKLRHAPSVHFQERVPDTEI 399
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/330 (54%), Positives = 235/330 (71%), Gaps = 3/330 (0%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCP+F+NL+++ +Y G ++DA R+L N DIAINW+GGLHHAKK SGFCY+
Sbjct: 112 FNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYV 171
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY TDRV T+SFHK+ FFPGTGD+
Sbjct: 172 NDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLT 231
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
EIG +GK +A+NVPL+DGIDD S+ LFK+I+ ++ T+ P IV QCGADSL DRLG
Sbjct: 232 EIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADSLGHDRLG 291
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN- 270
CFNL+I H ECV+FVK F LP+LV GGGGYT NV+R WT ETGIL D LP +IPE+
Sbjct: 292 CFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRNVSRLWTYETGILNDVLLPEDIPEDI 351
Query: 271 EYIKYFAPECSLR-IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQM-QEVPPDFY 328
+ F P+ SL + + EN NSK L I+++ LEN+R +Q APSV+M E P
Sbjct: 352 PFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIRCLENIRYLQGAPSVRMDAECIPTQD 411
Query: 329 IPEFDEDEQNPDERMDQHTQDKQIQRDDEF 358
I E+E + M++ T+ R +E
Sbjct: 412 ISALTEEEDKIIQEMNEETEADSSNRLEEM 441
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 175/317 (55%), Positives = 233/317 (73%), Gaps = 4/317 (1%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+N+G+DCPVF+ +EF Q AG ++DA+R+L DIAINW+GGLHHAK+ EASGFCY+
Sbjct: 111 FNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYV 170
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND+VL IL +L++ RVLYIDID+HHGDGV++AFY +DRV+TVSFHK+ FFP TG+
Sbjct: 171 NDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNFD 230
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
E G + GK++A+NVPL+DGI D +T LFK+II + T+ P AIVLQCGADSL DRLG
Sbjct: 231 ENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIEPTINTFQPSAIVLQCGADSLGYDRLG 290
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIP-EN 270
FNLSI H ECVRF + FN+P+LV GGGGYT NVAR W ET I ++ ++P+E+P E
Sbjct: 291 VFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLRNVARAWCYETSICVNEQIPSELPRET 350
Query: 271 EYIKYFAPECSL--RIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY 328
Y ++FAP+ +L R+ IEN N+ L ++++ LE LR + APSVQMQ++PPD
Sbjct: 351 LYYEFFAPDYTLHPRLTT-KIENKNTPKALEDLRIRALEQLRYLGGAPSVQMQQIPPDLT 409
Query: 329 IPEFDEDEQNPDERMDQ 345
+EDE+ DE +D+
Sbjct: 410 GHLEEEDERLNDEYLDK 426
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 353 bits (905), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 174/322 (54%), Positives = 232/322 (72%), Gaps = 9/322 (2%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
R +N+GEDCP+F L+++C +YAGG+++ ARRLN+++ DI INW GGLHHAKK EASGFC
Sbjct: 113 RQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFC 172
Query: 90 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 149
Y+ND+VLGILELLKYH RVLYIDID+HHGDGV+EAF +DRVMTVSFH+FG +FPG+G
Sbjct: 173 YVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQ-YFPGSGS 231
Query: 150 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 209
+ + G GK++AINVPL I D + +LF+++IS V E + P AIVLQCG+DSL DR
Sbjct: 232 IMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVISGVEENFNPEAIVLQCGSDSLCEDR 291
Query: 210 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 269
LG F LS + HA V++VK PL+V GGGGYT NVARCW +ETG++L + +EIP
Sbjct: 292 LGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTLRNVARCWALETGVILGLRMDDEIPG 351
Query: 270 NE-YIKYFAPECSLRIPN--GHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD 326
Y YF P L PN + + NS +YL++I+ + L LR I+ APSVQMQ +
Sbjct: 352 TSLYSHYFTPR--LLRPNLVPKMNDANSAAYLASIEKETLACLRMIRGAPSVQMQNI-VG 408
Query: 327 FYIPEFDEDEQNPDERMDQHTQ 348
+ E ++ E+N ER+ + ++
Sbjct: 409 IRLDEIEQIEEN--ERLQKSSK 428
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 334 bits (856), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 161/288 (55%), Positives = 207/288 (71%), Gaps = 5/288 (1%)
Query: 37 DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 96
D PVF NLF++C+ YAGG+I AA +LN Q DIAINWAGG+HH KK +ASGF Y+ND+VL
Sbjct: 106 DGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVL 165
Query: 97 GILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER 156
ILELLK RVLYI+I HGD VEEAF TDRVMTVSFHK GD TGD+ + GE
Sbjct: 166 AILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEG 220
Query: 157 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 216
+G++Y++N PLKDG+DD S LF +I + +E Y P IVLQCGADSLAGD G FNLS
Sbjct: 221 KGQYYSLNAPLKDGLDDFSLRGLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLS 280
Query: 217 IDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYF 276
I GH +C+++V+ FN+PL++ GGGGYT NVARCW ET I + +L N++P N+Y+KYF
Sbjct: 281 IKGHGDCLQYVRSFNVPLMILGGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYF 340
Query: 277 APECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVP 324
P+ L I + +NLN++ + T++ +L L + HAPSV Q+ P
Sbjct: 341 RPDYKLHILPTNRQNLNTRLDIITMRETLLAQLSLVMHAPSVPFQDTP 388
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 189/281 (67%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct: 96 YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV
Sbjct: 156 NDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
++G +G++Y++NVP++DGI D + ++ ++++ +V + + P A+VLQ GAD++AGD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EIP++E
Sbjct: 276 SFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L I + N + I + NL+ +
Sbjct: 336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 278 bits (712), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 188/281 (66%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFCY+
Sbjct: 96 YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYL 155
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD+
Sbjct: 156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMS 215
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AGD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EIP++E
Sbjct: 276 SFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L I + N + I + NL+ +
Sbjct: 336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 278 bits (712), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 128/281 (45%), Positives = 188/281 (66%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASGFCY+
Sbjct: 96 YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYL 155
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD+
Sbjct: 156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMS 215
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AGD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAGDPMC 275
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EIP++E
Sbjct: 276 SFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L I + N + I + NL+ +
Sbjct: 336 FFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|Q9LXN8|HDA17_ARATH Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1
Length = 158
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 145/155 (93%)
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
F++ GHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI EN+
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 121
Query: 332 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 122 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 275 bits (704), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 129/281 (45%), Positives = 187/281 (66%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP+ E ++++ G T+ AA +L IA+NW GG HHAKK EASGFCY+
Sbjct: 44 YGLGYDCPITEGIYDYAAAVGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYL 103
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL+L + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV
Sbjct: 104 NDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 163
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+IG +G++Y+INVPL+DGI D + ++ + ++ +V T+ P A+VLQ GAD++AGD +
Sbjct: 164 DIGLGKGRYYSINVPLQDGIQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMC 223
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ +G +C+++V ++ LP L+ GGGGY N ARCWT T +++ L +EIP++E
Sbjct: 224 SFNMTPEGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPDHE 283
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L I + N + I + NL+ +
Sbjct: 284 FFTEYGPDYVLEITPSCRPDRNDTQKVQEILQSIKGNLKRV 324
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/281 (45%), Positives = 186/281 (66%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP+ E ++++ G T+ AA +L IAINW GG HHAKK EASGFCY+
Sbjct: 88 YGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYL 147
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL+L + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV
Sbjct: 148 NDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 207
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+IG +G++Y++NVPL+DGI D + ++ + ++ +V T+ P A+VLQ GAD++AGD +
Sbjct: 208 DIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMC 267
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G +C+++V ++ LP L+ GGGGY N ARCWT T +++ L +EIP++E
Sbjct: 268 SFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPDHE 327
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L + + N + I + +L+ +
Sbjct: 328 FFTEYGPDYVLEVTPSCRPDRNDSQKVQEILQSIKGHLKQV 368
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 273 bits (698), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 126/281 (44%), Positives = 186/281 (66%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+
Sbjct: 96 YGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYL 155
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV
Sbjct: 156 NDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVS 215
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
++G +G++Y++NVP++D I D + + ++++ +V + P A+VLQ GAD++AGD +
Sbjct: 216 DVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDPMC 275
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EIP++E
Sbjct: 276 SFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPDHE 335
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ L I + N + I + NL+ +
Sbjct: 336 FFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 131/281 (46%), Positives = 189/281 (67%)
Query: 32 YNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYI 91
+ LG DCPV E +F++ G T+ AA+ L + CD+AINWAGG HHAKK EASG CY+
Sbjct: 97 FGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYV 156
Query: 92 NDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVK 151
ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV
Sbjct: 157 NDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVT 216
Query: 152 EIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 211
+ G +G++YA+NVP +DG+ D + + F +++ +V + P A+V+Q GAD++AGD +
Sbjct: 217 DTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDPMC 276
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
FN++ G A+C+ ++ + LP L+ GGGGY N ARCWT TG +L L +EIP++E
Sbjct: 277 SFNMTPVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPDHE 336
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 312
+ + P+ SL I + N +L + + NL+++
Sbjct: 337 FFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLKNV 377
>sp|Q9M1N8|HDA10_ARATH Putative histone deacetylase 10 OS=Arabidopsis thaliana GN=HDA10
PE=3 SV=1
Length = 142
Score = 236 bits (603), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 130/155 (83%), Gaps = 16/155 (10%)
Query: 212 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 271
F++ GHAEC GGYTKENVARCWTVETGILLDTELPNEIPEN+
Sbjct: 2 AFSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPEND 45
Query: 272 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 331
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 46 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 105
Query: 332 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 366
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 106 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 140
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 136/230 (59%), Gaps = 8/230 (3%)
Query: 30 RLYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 89
+ YNL DCP+F L +CQ+ G T++ L+ I INW GG HHA K ASGFC
Sbjct: 162 KQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRHHAFKQRASGFC 221
Query: 90 YINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTG 148
YIND+VL I L K ++ Y+D D+HHGDGVE+AF ++ ++ T+S H + FFPGTG
Sbjct: 222 YINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVHLYEPGFFPGTG 281
Query: 149 DVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGD 208
+ + R+ K +N+PLK G DD + I++ ++E + P A++++CG D L GD
Sbjct: 282 SLSD--SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALIIECGGDGLLGD 338
Query: 209 RLGCFNLSIDGHAECVRFVKKFNLP---LLVTGGGGYTKENVARCWTVET 255
R + L+I G + + + K + P + + GGGGY ++R +T T
Sbjct: 339 RFNEWQLTIRGLSRIIINIMK-SYPRAHIFLLGGGGYNDLLMSRFYTYLT 387
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 155 bits (391), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/274 (36%), Positives = 135/274 (49%), Gaps = 17/274 (6%)
Query: 25 PMKPHRLYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKC 83
P + Y LG ED PVF + E + GGT+ AA + + A N GGLHH +
Sbjct: 78 PAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALHAANLGGGLHHGFRG 137
Query: 84 EASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 142
ASGFC ND + I + K Y ARVLYID D HHGDGV+ FY V T+S H+ G
Sbjct: 138 RASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHETGRY 197
Query: 143 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 202
FPGTG ++E G +G Y+ N+PL +D SF ++T S+V + P I+ Q GA
Sbjct: 198 LFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGA 257
Query: 203 DSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGGGGYTKENV-----ARCWT 252
D+ D L + +I+ + E R + GGGGY V AR W
Sbjct: 258 DAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCGGKWIAVGGGGYDIWRVVPRAWARIWL 317
Query: 253 VETGILLDTELPNEIPENEYIKYFAPECSLRIPN 286
GI E+P E+I + +C + +P+
Sbjct: 318 EMKGIDPGHEIP-----PEWIVKWQKQCPVALPS 346
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 135/289 (46%), Gaps = 7/289 (2%)
Query: 36 EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLV 95
E+ F+++ GG + A + + + GGLHHA+ ASGFC ND+
Sbjct: 94 EENGQFKHMHRHSATIVGGALTLADLIMSGKALNGCHLGGGLHHAQPGRASGFCIYNDIA 153
Query: 96 LGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 154
+ L K Y+ RVL ID D HHGDG + +FY + V T S H+ G FPG+G E G
Sbjct: 154 ITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERG 213
Query: 155 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
E G + +NVPL+ +D+SF FK + VV+++ P I+ G D D L N
Sbjct: 214 EDIGYGHTVNVPLEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLN 273
Query: 215 LSIDGHAECVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIP 268
++ E FVK N +++ GGGGY V R W+ L+D + +
Sbjct: 274 CTLHSLYEIPYFVKYLADTYTNGKIIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYL 333
Query: 269 ENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 317
E+I + S +P + LN +Y+ K +N + H S
Sbjct: 334 PLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 36 EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLV 95
E+ F+++ GG + A + + + GGLHHA+ ASGFC ND+
Sbjct: 94 EENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIA 153
Query: 96 LGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 154
+ L K Y+ RVL ID D HHGDG + +FY + V T S H+ G FPG+G E G
Sbjct: 154 ITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERG 213
Query: 155 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
E G + +NVPL+ +D SF FK + VV+++ P I+ G D D L N
Sbjct: 214 EDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLN 273
Query: 215 LSIDGHAECVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIP 268
++ E FVK N +++ GGGGY V R W+ L+D + +
Sbjct: 274 CTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYL 333
Query: 269 ENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 317
E+I + S +P + LN +Y+ K +N + H S
Sbjct: 334 PLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 36 EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLV 95
E+ F+++ GG + A + + + GGLHHA+ ASGFC ND+
Sbjct: 94 EENSQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIA 153
Query: 96 LGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 154
+ L K Y+ RVL ID D HHGDG + +FY + V T S H+ G FPG+G E G
Sbjct: 154 ITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERG 213
Query: 155 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
E G + +NVPL+ +D SF FK + VV+++ P I+ G D D L N
Sbjct: 214 EDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLN 273
Query: 215 LSIDGHAECVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIP 268
++ E FVK N +++ GGGGY V R W+ L+D + +
Sbjct: 274 CTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYL 333
Query: 269 ENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 317
E+I + S +P + LN +Y+ K +N + H S
Sbjct: 334 PLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 36 EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLV 95
E+ F+++ GG + A + + + GGLHHA+ ASGFC ND+
Sbjct: 94 EENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIA 153
Query: 96 LGILELLK-YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIG 154
+ L K Y+ RVL ID D HHGDG + +FY + V T S H+ G FPG+G E G
Sbjct: 154 ITAQYLAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERG 213
Query: 155 EREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 214
E G + +NVPL+ +D SF FK + VV+++ P I+ G D D L N
Sbjct: 214 EDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLN 273
Query: 215 LSIDGHAECVRFVKKF-----NLPLLVTGGGGYTKENVA-RCWTVETGILLDTELPNEIP 268
++ E FVK N +++ GGGGY V R W+ L+D + +
Sbjct: 274 CTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYL 333
Query: 269 ENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPS 317
E+I + S +P + LN +Y+ K +N + H S
Sbjct: 334 PLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIAS 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.141 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,547,055
Number of Sequences: 539616
Number of extensions: 7209280
Number of successful extensions: 18941
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 18512
Number of HSP's gapped (non-prelim): 259
length of query: 371
length of database: 191,569,459
effective HSP length: 119
effective length of query: 252
effective length of database: 127,355,155
effective search space: 32093499060
effective search space used: 32093499060
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)