Query 017489
Match_columns 370
No_of_seqs 383 out of 1679
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 09:01:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017489.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017489hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 4E-115 9E-120 803.5 30.4 342 1-364 26-367 (369)
2 PLN03158 methionine aminopepti 100.0 1.1E-99 2E-104 753.1 38.8 367 1-369 27-393 (396)
3 COG0024 Map Methionine aminope 100.0 7.4E-65 1.6E-69 473.0 28.3 248 111-358 3-253 (255)
4 PRK12897 methionine aminopepti 100.0 5.3E-58 1.2E-62 431.7 28.7 246 111-356 2-247 (248)
5 PRK07281 methionine aminopepti 100.0 1.3E-57 2.8E-62 436.3 29.5 249 110-358 1-281 (286)
6 PRK12896 methionine aminopepti 100.0 6.8E-56 1.5E-60 418.1 29.8 248 110-357 7-255 (255)
7 TIGR00500 met_pdase_I methioni 100.0 1.4E-55 3.1E-60 414.4 29.8 246 112-357 2-247 (247)
8 PRK12318 methionine aminopepti 100.0 1.2E-55 2.5E-60 424.5 29.4 246 111-357 41-289 (291)
9 PRK05716 methionine aminopepti 100.0 1.4E-54 3.1E-59 408.4 29.7 249 110-358 2-250 (252)
10 cd01086 MetAP1 Methionine Amin 100.0 8.9E-51 1.9E-55 379.5 28.5 238 119-356 1-238 (238)
11 PRK09795 aminopeptidase; Provi 100.0 2E-49 4.2E-54 392.5 25.9 225 107-357 121-351 (361)
12 PRK10879 proline aminopeptidas 100.0 2.5E-48 5.5E-53 393.2 26.0 241 108-365 168-428 (438)
13 COG0006 PepP Xaa-Pro aminopept 100.0 6.5E-48 1.4E-52 384.6 25.3 230 106-362 147-380 (384)
14 cd01090 Creatinase Creatine am 100.0 2.6E-47 5.6E-52 354.9 25.6 225 119-356 1-228 (228)
15 cd01087 Prolidase Prolidase. E 100.0 5.4E-47 1.2E-51 355.3 24.4 223 119-356 1-243 (243)
16 PRK15173 peptidase; Provisiona 100.0 1.1E-46 2.3E-51 367.6 26.4 228 106-361 88-318 (323)
17 TIGR02993 ectoine_eutD ectoine 100.0 2.8E-46 6.1E-51 373.6 24.4 231 106-362 151-387 (391)
18 PRK14575 putative peptidase; P 100.0 7.6E-46 1.6E-50 372.1 26.6 227 107-361 172-401 (406)
19 TIGR00495 crvDNA_42K 42K curve 100.0 4.4E-45 9.6E-50 363.1 29.1 245 112-357 12-337 (389)
20 PRK14576 putative endopeptidas 100.0 2.9E-45 6.4E-50 367.7 26.7 227 107-361 171-400 (405)
21 cd01092 APP-like Similar to Pr 100.0 1.3E-43 2.9E-48 323.4 24.9 207 119-351 1-208 (208)
22 PRK13607 proline dipeptidase; 100.0 2.9E-43 6.3E-48 356.1 25.1 244 108-358 156-440 (443)
23 PTZ00053 methionine aminopepti 100.0 9.7E-43 2.1E-47 349.4 27.4 237 111-357 150-467 (470)
24 cd01085 APP X-Prolyl Aminopept 100.0 2.3E-42 5E-47 320.8 23.3 209 120-353 5-221 (224)
25 PRK08671 methionine aminopepti 100.0 1E-41 2.2E-46 328.1 27.2 227 118-356 1-291 (291)
26 PF00557 Peptidase_M24: Metall 100.0 1.3E-41 2.9E-46 310.6 22.8 204 120-348 1-207 (207)
27 cd01089 PA2G4-like Related to 100.0 2.7E-41 5.9E-46 314.3 24.6 214 119-356 1-228 (228)
28 TIGR00501 met_pdase_II methion 100.0 5.8E-41 1.3E-45 323.3 27.5 229 116-356 2-295 (295)
29 cd01088 MetAP2 Methionine Amin 100.0 1.1E-40 2.4E-45 320.9 26.8 226 119-356 1-291 (291)
30 cd01091 CDC68-like Related to 100.0 6.1E-41 1.3E-45 314.7 23.3 226 119-356 1-243 (243)
31 cd01066 APP_MetAP A family inc 100.0 2.5E-40 5.4E-45 298.8 23.9 206 119-351 1-207 (207)
32 KOG2414 Putative Xaa-Pro amino 100.0 1.7E-38 3.7E-43 305.2 16.8 239 108-365 223-480 (488)
33 KOG2737 Putative metallopeptid 100.0 3.9E-35 8.4E-40 279.6 15.3 252 108-364 180-473 (492)
34 KOG1189 Global transcriptional 99.9 1.8E-24 3.8E-29 220.6 17.3 238 107-363 131-384 (960)
35 KOG2775 Metallopeptidase [Gene 99.9 4.3E-23 9.3E-28 192.1 17.0 238 114-357 80-394 (397)
36 KOG2413 Xaa-Pro aminopeptidase 99.9 1.5E-21 3.3E-26 196.8 17.6 224 108-353 302-538 (606)
37 KOG2776 Metallopeptidase [Gene 99.8 4.3E-17 9.2E-22 155.7 18.8 245 112-358 14-341 (398)
38 COG5406 Nucleosome binding fac 99.7 6E-17 1.3E-21 163.1 14.9 243 107-367 164-427 (1001)
39 PLN03144 Carbon catabolite rep 98.7 8.9E-09 1.9E-13 107.6 3.4 33 1-33 81-113 (606)
40 PLN03158 methionine aminopepti 97.6 0.00047 1E-08 69.4 10.6 117 210-348 126-247 (396)
41 cd01086 MetAP1 Methionine Amin 97.6 0.00069 1.5E-08 63.1 10.8 103 226-348 2-105 (238)
42 cd01066 APP_MetAP A family inc 97.5 0.0016 3.5E-08 58.1 12.5 102 120-223 102-204 (207)
43 cd01092 APP-like Similar to Pr 97.3 0.004 8.7E-08 56.3 11.8 101 120-222 103-204 (208)
44 cd01088 MetAP2 Methionine Amin 97.2 0.0024 5.1E-08 61.8 10.4 98 226-348 2-100 (291)
45 PRK05716 methionine aminopepti 97.2 0.0049 1.1E-07 57.8 11.7 100 121-223 119-240 (252)
46 PRK12896 methionine aminopepti 97.1 0.0035 7.6E-08 58.9 9.8 109 216-348 5-120 (255)
47 TIGR00500 met_pdase_I methioni 97.0 0.011 2.3E-07 55.5 12.2 100 121-223 117-238 (247)
48 PRK15173 peptidase; Provisiona 96.9 0.012 2.7E-07 57.7 12.1 102 121-222 203-305 (323)
49 PRK12897 methionine aminopepti 96.8 0.013 2.8E-07 55.2 10.8 100 121-223 118-239 (248)
50 cd01090 Creatinase Creatine am 96.8 0.021 4.5E-07 53.2 12.1 101 121-223 110-220 (228)
51 PRK14575 putative peptidase; P 96.8 0.016 3.5E-07 58.6 12.1 101 121-223 286-389 (406)
52 PRK09795 aminopeptidase; Provi 96.7 0.028 6.2E-07 55.8 13.0 105 116-222 236-341 (361)
53 PRK14576 putative endopeptidas 96.6 0.024 5.2E-07 57.3 12.3 100 121-222 285-387 (405)
54 PRK12318 methionine aminopepti 96.6 0.024 5.3E-07 54.8 11.6 87 121-210 159-248 (291)
55 TIGR02993 ectoine_eutD ectoine 96.6 0.023 5E-07 57.2 11.6 98 121-222 271-373 (391)
56 PRK07281 methionine aminopepti 96.5 0.027 5.8E-07 54.4 11.3 85 121-208 149-237 (286)
57 cd01091 CDC68-like Related to 96.5 0.024 5.2E-07 53.4 10.7 100 120-223 119-234 (243)
58 cd01087 Prolidase Prolidase. E 96.5 0.031 6.6E-07 52.2 11.3 103 121-223 104-235 (243)
59 PRK08671 methionine aminopepti 96.3 0.083 1.8E-06 51.1 13.1 95 121-222 102-205 (291)
60 COG0024 Map Methionine aminope 96.2 0.02 4.3E-07 54.3 8.2 87 226-315 12-101 (255)
61 TIGR00495 crvDNA_42K 42K curve 96.2 0.035 7.7E-07 55.9 10.3 104 227-348 21-130 (389)
62 PF00557 Peptidase_M24: Metall 96.1 0.073 1.6E-06 48.1 11.4 97 226-346 1-98 (207)
63 cd01089 PA2G4-like Related to 96.1 0.07 1.5E-06 49.5 11.0 99 120-223 120-220 (228)
64 TIGR00501 met_pdase_II methion 95.8 0.097 2.1E-06 50.7 11.1 98 226-348 6-104 (295)
65 KOG2738 Putative methionine am 95.5 0.052 1.1E-06 52.0 7.6 86 226-315 123-211 (369)
66 COG0006 PepP Xaa-Pro aminopept 95.5 0.15 3.3E-06 51.1 11.5 100 122-223 264-367 (384)
67 PTZ00053 methionine aminopepti 94.9 0.28 6E-06 50.5 11.4 98 227-347 160-262 (470)
68 PRK10879 proline aminopeptidas 94.5 0.49 1.1E-05 48.5 12.1 101 122-222 284-410 (438)
69 PF01753 zf-MYND: MYND finger; 93.4 0.028 6.1E-07 37.0 0.5 19 9-27 17-35 (37)
70 cd01085 APP X-Prolyl Aminopept 92.1 2.8 6E-05 38.9 12.1 96 123-222 114-215 (224)
71 PRK13607 proline dipeptidase; 90.9 2.4 5.3E-05 43.5 11.3 88 123-210 271-391 (443)
72 KOG2776 Metallopeptidase [Gene 80.3 9 0.00019 38.0 8.3 105 227-357 23-141 (398)
73 KOG1710 MYND Zn-finger and ank 79.9 0.72 1.6E-05 44.3 0.7 21 11-31 341-361 (396)
74 KOG1189 Global transcriptional 74.8 12 0.00025 40.7 7.9 99 121-223 258-368 (960)
75 KOG2775 Metallopeptidase [Gene 74.5 22 0.00047 34.7 8.9 83 226-314 86-174 (397)
76 COG3350 Uncharacterized conser 69.4 1.9 4.2E-05 30.7 0.5 12 10-21 28-39 (53)
77 cd01666 TGS_DRG_C TGS_DRG_C: 67.6 18 0.00039 27.7 5.6 52 140-202 21-73 (75)
78 PF09889 DUF2116: Uncharacteri 61.5 5.6 0.00012 29.1 1.7 22 9-30 16-37 (59)
79 PF06467 zf-FCS: MYM-type Zinc 50.2 7.8 0.00017 25.8 0.8 12 9-20 31-42 (43)
80 PF00254 FKBP_C: FKBP-type pep 47.3 30 0.00065 26.8 4.0 51 191-250 2-59 (94)
81 PF04181 RPAP2_Rtr1: Rtr1/RPAP 45.9 9.4 0.0002 29.3 0.8 13 9-21 58-70 (79)
82 PF02069 Metallothio_Pro: Prok 45.9 8.1 0.00018 27.5 0.4 17 4-20 22-38 (52)
83 COG5406 Nucleosome binding fac 43.7 79 0.0017 34.0 7.2 72 130-205 308-384 (1001)
84 PF05184 SapB_1: Saposin-like 43.4 48 0.001 21.2 3.9 34 125-158 3-36 (39)
85 PF07305 DUF1454: Protein of u 38.7 1.5E+02 0.0033 26.9 7.3 74 225-312 114-187 (200)
86 PF04945 YHS: YHS domain; Int 38.5 13 0.00029 25.4 0.6 12 10-21 25-36 (47)
87 PRK01490 tig trigger factor; P 37.6 1.7E+02 0.0036 29.7 8.7 56 144-223 132-191 (435)
88 cd04938 TGS_Obg-like TGS_Obg-l 37.0 57 0.0012 24.9 3.9 47 140-202 28-74 (76)
89 TIGR00115 tig trigger factor. 36.5 1.9E+02 0.0041 29.1 8.7 57 144-223 120-180 (408)
90 PF10415 FumaraseC_C: Fumarase 33.5 55 0.0012 23.4 3.1 35 121-155 10-49 (55)
91 KOG2611 Neurochondrin/leucine- 31.0 25 0.00054 36.5 1.3 69 197-265 584-662 (698)
92 PF09506 Salt_tol_Pase: Glucos 29.8 1.8E+02 0.004 28.9 6.9 52 114-165 97-148 (381)
93 PF03477 ATP-cone: ATP cone do 27.9 33 0.00071 26.5 1.3 35 128-162 40-74 (90)
94 TIGR02399 salt_tol_Pase glucos 27.7 2.1E+02 0.0045 28.6 6.8 52 114-165 103-154 (389)
95 PF02824 TGS: TGS domain; Int 26.3 61 0.0013 23.4 2.4 46 140-202 13-58 (60)
96 PRK07440 hypothetical protein; 26.1 1.2E+02 0.0025 22.7 3.9 32 175-207 35-67 (70)
97 PF12631 GTPase_Cys_C: Catalyt 24.5 1.8E+02 0.0038 21.8 4.7 42 224-265 10-51 (73)
98 PRK05659 sulfur carrier protei 24.4 1.5E+02 0.0032 21.4 4.2 27 176-202 32-59 (66)
99 cd01669 TGS_Ygr210_C TGS_Ygr21 23.7 1.9E+02 0.0041 22.1 4.8 48 140-202 27-74 (76)
100 PF02829 3H: 3H domain; Inter 23.6 1.9E+02 0.0042 23.3 5.0 68 199-268 22-96 (98)
101 COG3001 Uncharacterized protei 23.2 1.3E+02 0.0028 28.7 4.4 42 193-235 201-242 (286)
102 COG0544 Tig FKBP-type peptidyl 22.9 1.7E+02 0.0038 30.1 5.7 44 144-211 132-175 (441)
103 PRK06488 sulfur carrier protei 22.6 1.5E+02 0.0032 21.4 3.9 28 175-202 30-58 (65)
104 PRK05423 hypothetical protein; 21.4 1.5E+02 0.0033 23.8 3.8 26 132-157 44-69 (104)
105 PRK07696 sulfur carrier protei 20.7 1.8E+02 0.0038 21.4 4.0 41 153-202 19-60 (67)
106 PF14538 Raptor_N: Raptor N-te 20.3 2.7E+02 0.0059 24.3 5.7 34 248-281 70-104 (154)
107 smart00746 TRASH metallochaper 20.1 46 0.00099 19.7 0.6 12 10-21 24-35 (39)
108 PRK00464 nrdR transcriptional 20.1 2.5E+02 0.0054 24.6 5.4 39 125-163 84-122 (154)
109 PF04355 SmpA_OmlA: SmpA / Oml 20.1 69 0.0015 23.6 1.7 19 135-153 7-25 (71)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-115 Score=803.47 Aligned_cols=342 Identities=65% Similarity=1.081 Sum_probs=329.6
Q ss_pred CCCCCCCCCCcccChhhhhhhhhhHhHhhhhhccCCCCCCCCCCccccccchhcccCCCCCCCCCCCcccCccccccCCC
Q 017489 1 MELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISS 80 (370)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~ 80 (370)
+|+||+ ++|||+|+|||++|.+||++|.++.. ....+.|+|||.|.|+|+||||++||
T Consensus 26 ~~~~i~--~~~fc~q~cf~~~w~~hK~~h~~~~~--------------------~~~~g~~~p~p~~~~~g~Lr~~pvsp 83 (369)
T KOG2738|consen 26 LKLGIK--SAYFCAQECFKNSWLSHKKLHRKALR--------------------IRKEGQYNPWPKFRFTGPLRPGPVSP 83 (369)
T ss_pred hhcCCC--cccccCchhhhcchhhhhhhcccchh--------------------hhhhccCCCCccccccCCccccCCCC
Confidence 589998 68999999999999999999974210 22357789999999999999999999
Q ss_pred CcccCCCCCCCccccCCCCCccCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc
Q 017489 81 KLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA 160 (370)
Q Consensus 81 ~~~vp~~i~~p~y~~~g~~~~e~~~~~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~ 160 (370)
+|.||+||+||||+++|.+.+|+.....+.+.|+++++|+.||+||+|++++|+.|..+++||+|++|||+++|++++++
T Consensus 84 rr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ier 163 (369)
T KOG2738|consen 84 RRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIER 163 (369)
T ss_pred CCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhc
Confidence 99999999999999999999999887777899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHH
Q 017489 161 GGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLE 240 (370)
Q Consensus 161 g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~ 240 (370)
|+|||||||++||+|||+|+|+++|||+||.|+||+|||||||+++|++|||+|+++||+||+++++.++|+++++||++
T Consensus 164 g~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vde~~k~LVkvT~EcL~ 243 (369)
T KOG2738|consen 164 GAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVDEKAKKLVKVTRECLE 243 (369)
T ss_pred CCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCccc
Q 017489 241 KAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRD 320 (370)
Q Consensus 241 ~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~ 320 (370)
.||+++|||+++++|++.|++++.++||++++.|||||||..||..|+|+||++|+..++|++||+|||||||+.|+|++
T Consensus 244 kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~tFTIEPmit~G~~~d 323 (369)
T KOG2738|consen 244 KAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQTFTIEPMITIGTWED 323 (369)
T ss_pred HHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCceEEeeeeeccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCc
Q 017489 321 RMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPKV 364 (370)
Q Consensus 321 ~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~ 364 (370)
.+|||+||++|+||++++|||||+|||++|+||||++.+++|.+
T Consensus 324 ~tWPD~WT~vTaDG~~sAQFEhTlLVT~tG~EILT~r~~~~p~~ 367 (369)
T KOG2738|consen 324 ITWPDDWTAVTADGKRSAQFEHTLLVTETGCEILTKRLPNSPWF 367 (369)
T ss_pred ccCCCCceEEecCCceecceeeEEEEecccceehhcccCCCCCC
Confidence 99999999999999999999999999999999999999999654
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-99 Score=753.14 Aligned_cols=367 Identities=87% Similarity=1.446 Sum_probs=343.4
Q ss_pred CCCCCCCCCCcccChhhhhhhhhhHhHhhhhhccCCCCCCCCCCccccccchhcccCCCCCCCCCCCcccCccccccCCC
Q 017489 1 MELKLPREGAAFCTQDCFKASWTSHKSVHLKAKLSAPGTGENSSLVSEGWRYCIKKGQARTPKLPHFDWTGTLRPYPISS 80 (370)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~~~ 80 (370)
+|+||+...||||||+|||.||++||++|+..+... ......+..+.|+||...+...++|||+|.|||+||||++||
T Consensus 27 ~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (396)
T PLN03158 27 LELKLPREGASFCSQDCFKAAWSSHKSVHTKAKLSS--IGQNSDAPAEGWLYCLKKGQARTSKLPDFDWTGPLRPYPISP 104 (396)
T ss_pred hhcCCCCCCceeECHHHHHHHHHHHHHHHHhhhhcc--cccccccccccccccccccccccCCCCCCCCCcccccCCCCC
Confidence 589997667999999999999999999997533210 011222345689999987778899999999999999999999
Q ss_pred CcccCCCCCCCccccCCCCCccCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc
Q 017489 81 KLTVPAYIELPDWALDGTPKVEPNSDLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA 160 (370)
Q Consensus 81 ~~~vp~~i~~p~y~~~g~~~~e~~~~~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~ 160 (370)
+|.||+||++|+|+.+|.|.++....+.+.|.|||++||+.||+|+++++++|+.+.++++||+||.||+++++++++++
T Consensus 105 ~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~ 184 (396)
T PLN03158 105 RRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAA 184 (396)
T ss_pred CCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHc
Confidence 99999999999999999998877666677899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHH
Q 017489 161 GGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLE 240 (370)
Q Consensus 161 g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~ 240 (370)
|++|+++||.+||+++|+|+|+++|||+|++++|++||+|+||++++++||++|++|||+||+++++++++++++++|++
T Consensus 185 Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~~e~~~l~e~~~eal~ 264 (396)
T PLN03158 185 GGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVDEASRQLVKCTYECLE 264 (396)
T ss_pred CCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCccc
Q 017489 241 KAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRD 320 (370)
Q Consensus 241 ~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~ 320 (370)
++|+++|||++++||+++++++++++||+++++|+|||||+.+||.|+|+||.+++..++|+|||||||||||+.|.+++
T Consensus 265 ~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GMVfTIEP~i~~g~~~~ 344 (396)
T PLN03158 265 KAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQVFTIEPMINAGVWRD 344 (396)
T ss_pred HHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCcEEEECCeeccCcccc
Confidence 99999999999999999999999999999999999999999999999999998777778999999999999999999999
Q ss_pred ccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCcccccc
Q 017489 321 RMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPKVYPWLN 369 (370)
Q Consensus 321 ~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~~~~~~ 369 (370)
.+|||+||++|.||.+++|||||||||++|+|+||.+.|++|+...||.
T Consensus 345 ~~~~d~wt~~t~dG~~~aq~E~tvlVTe~G~EiLT~~~~~~~~~~~~~~ 393 (396)
T PLN03158 345 RMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPDVFPWLK 393 (396)
T ss_pred eecCCCceEEecCCceeeEeeeEEEEeCCcceECCCCCCCCcccccccC
Confidence 9999999999999999999999999999999999999999999777874
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=7.4e-65 Score=473.04 Aligned_cols=248 Identities=46% Similarity=0.748 Sum_probs=239.4
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC
Q 017489 111 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD 190 (370)
Q Consensus 111 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~ 190 (370)
+.+|+++||+.||+||+|++++++.+.+.++||+|+.||+++++++++++|++|++++|.+||..+|+|+|+++|||+|+
T Consensus 3 i~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~ 82 (255)
T COG0024 3 ISIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPG 82 (255)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCC
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCC-HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 017489 191 -SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNAD-EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF 268 (370)
Q Consensus 191 -~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~-~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~ 268 (370)
+++|++||+|+||+|+.++||++|.++||.||+.+ +..++|.+++++|++++|+.+|||++++||+++|+++++++||
T Consensus 83 d~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~ 162 (255)
T COG0024 83 DKKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGF 162 (255)
T ss_pred CCcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC
Confidence 68899999999999999999999999999999655 5788899999999999999999999999999999999999999
Q ss_pred ceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCC-CCceEEeeCCeeeEEEeEEEEEe
Q 017489 269 SVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWP-DGWTAVTADGKRSAQFEHTLLVT 347 (370)
Q Consensus 269 ~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wp-d~wt~~t~~g~~~~~~EdtvlVT 347 (370)
++++.|+|||||..+|+.|++|||.++.....|+|||||+||||++.|++....++ |+||++|.||..++||||||+||
T Consensus 163 ~vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G~~~~~~~~~d~Wt~~t~d~~~~aq~EHTv~Vt 242 (255)
T COG0024 163 SVVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTGSGEVVEGPSDRWTLVTKDGSLSAQFEHTVIVT 242 (255)
T ss_pred EEeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcCCCceEecCCCCeEEEeCCCCEEeEEEEEEEEe
Confidence 99999999999999999999999987777789999999999999999999999999 99999999999999999999999
Q ss_pred CCCeeecCCCC
Q 017489 348 ETGVEVLTARL 358 (370)
Q Consensus 348 e~G~EvLT~~~ 358 (370)
++|+|+||.+.
T Consensus 243 ~~g~eilT~~~ 253 (255)
T COG0024 243 EDGCEILTLRP 253 (255)
T ss_pred CCCcEEeeCCC
Confidence 99999999874
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=5.3e-58 Score=431.67 Aligned_cols=246 Identities=35% Similarity=0.576 Sum_probs=234.7
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC
Q 017489 111 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD 190 (370)
Q Consensus 111 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~ 190 (370)
+.|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+||..+|+|.|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998766667789988999999999999999
Q ss_pred CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCce
Q 017489 191 SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV 270 (370)
Q Consensus 191 ~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~ 270 (370)
+++|++||+|++|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.|+..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCC
Q 017489 271 VKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETG 350 (370)
Q Consensus 271 ~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G 350 (370)
.++++|||||+.+||.|.+.++.+.++..+|+|||||||||+++.|......|.|+|++.|.+|.+++|+||||+||++|
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~~G 241 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITKDG 241 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeCCc
Confidence 88999999999999999998765556678999999999999999988888889999999999999999999999999999
Q ss_pred eeecCC
Q 017489 351 VEVLTA 356 (370)
Q Consensus 351 ~EvLT~ 356 (370)
+|+||.
T Consensus 242 ~e~lt~ 247 (248)
T PRK12897 242 PIILTK 247 (248)
T ss_pred cEEeec
Confidence 999996
No 5
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-57 Score=436.32 Aligned_cols=249 Identities=28% Similarity=0.520 Sum_probs=232.7
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCC----CcCCceeeeCCCCccc
Q 017489 110 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNY----HFFPKSCCTSVNEVIC 185 (370)
Q Consensus 110 ~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~----~~fp~~v~ss~n~~~~ 185 (370)
++.|||++||+.||+|++|++++++++.+.++||+||.||++.++..+.++|++|..+++ .+||.++|+|.|+.++
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecccccc
Confidence 357999999999999999999999999999999999999999999999999998877654 5699999999999999
Q ss_pred cCCCCCCCCCCCCeeEEEEee---------------------------eeCCEEeeeeceEEecCCCHHHHHHHHHHHHH
Q 017489 186 HGIPDSRKLEDGDIVNIDVTV---------------------------YYKGVHGDLNETYFVGNADEASRQLVQCTYEC 238 (370)
Q Consensus 186 Hg~p~~r~L~~GDiV~iDvg~---------------------------~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea 238 (370)
|+.|++++|++||+|+||+++ .|+||++|++|||++|+++++++++++++++|
T Consensus 81 H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea 160 (286)
T PRK07281 81 HAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEA 160 (286)
T ss_pred CCCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHH
Confidence 999999999999999999997 48999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCc
Q 017489 239 LEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVW 318 (370)
Q Consensus 239 ~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~ 318 (370)
++++++++|||++++||+++++++++++||..+++++|||||+.+||.|.++++...+...+|+|||||+|||+++.|.+
T Consensus 161 ~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~ 240 (286)
T PRK07281 161 MYRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTW 240 (286)
T ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCc
Confidence 99999999999999999999999999999998888999999999999999987654566789999999999999999766
Q ss_pred cc-ccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecCCCC
Q 017489 319 RD-RMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTARL 358 (370)
Q Consensus 319 ~~-~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~ 358 (370)
.. ..++|+||+++.+|..++|+|||||||++|+|+||...
T Consensus 241 ~~~~~~~~gw~~~~~~g~~gvr~EdtvlVT~~G~e~LT~~~ 281 (286)
T PRK07281 241 EIDTDMKTGWAHKTLDGGLSCQYEHQFVITKDGPVILTSQG 281 (286)
T ss_pred ceecccCCCceEEecCCCcEEEeccEEEEeCCcceECCCCC
Confidence 43 34689999999999999999999999999999999753
No 6
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=6.8e-56 Score=418.08 Aligned_cols=248 Identities=41% Similarity=0.695 Sum_probs=235.0
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCC
Q 017489 110 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 189 (370)
Q Consensus 110 ~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p 189 (370)
.+.|||++||+.||+|+++++++++.+.+.++||+||.||++.+...+.++|+.++...+.+||..+|+|.|...+|+.|
T Consensus 7 ~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~p 86 (255)
T PRK12896 7 GMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGIP 86 (255)
T ss_pred ceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecCC
Confidence 46899999999999999999999999999999999999999999999999999988777888999999999999999999
Q ss_pred CCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCc
Q 017489 190 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 269 (370)
Q Consensus 190 ~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~ 269 (370)
++++|++||+|.+|+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|+.
T Consensus 87 ~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~ 166 (255)
T PRK12896 87 GPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYS 166 (255)
T ss_pred CCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceeeecccccccCCCC-CCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 270 VVKSYCGHGIGELFHCAPNI-PHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 270 ~~~~~~GHGIG~~~he~P~i-~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
..++++|||||+.+||.|.+ .++..++++.+|++||||+|||+++.|..+...|+|+|++.+.+|.+++|+||||+||+
T Consensus 167 ~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt~ 246 (255)
T PRK12896 167 VVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVTR 246 (255)
T ss_pred eccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEcC
Confidence 88889999999999999954 33433456789999999999999999999999999999999999999999999999999
Q ss_pred CCeeecCCC
Q 017489 349 TGVEVLTAR 357 (370)
Q Consensus 349 ~G~EvLT~~ 357 (370)
+|+|+||.+
T Consensus 247 ~G~e~Lt~~ 255 (255)
T PRK12896 247 DGPEILTDR 255 (255)
T ss_pred CcceecCCC
Confidence 999999974
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=1.4e-55 Score=414.40 Aligned_cols=246 Identities=49% Similarity=0.833 Sum_probs=234.0
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCC
Q 017489 112 EIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDS 191 (370)
Q Consensus 112 ~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~ 191 (370)
.|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+...++.+||.++++|.|+.++|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988777778899999999999999999999
Q ss_pred CCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCcee
Q 017489 192 RKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV 271 (370)
Q Consensus 192 r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~ 271 (370)
++|++||+|++|+++.|+||++|++|||++|++++++++++++++++++++++.+|||++++||+++++++++++|+...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCe
Q 017489 272 KSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGV 351 (370)
Q Consensus 272 ~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~ 351 (370)
++++|||||+.+||.|.++.+....++.+|++||||+|||+++.+......++++|+....+|.+++|+||||+||++|+
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~~G~ 241 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITDNGP 241 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcCCcc
Confidence 88899999999999999887655566789999999999999999877777788999999999999999999999999999
Q ss_pred eecCCC
Q 017489 352 EVLTAR 357 (370)
Q Consensus 352 EvLT~~ 357 (370)
|+||.|
T Consensus 242 e~Lt~~ 247 (247)
T TIGR00500 242 EILTER 247 (247)
T ss_pred EEccCC
Confidence 999975
No 8
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.2e-55 Score=424.53 Aligned_cols=246 Identities=46% Similarity=0.791 Sum_probs=229.7
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCC--cCCceeeeCCCCccccCC
Q 017489 111 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYH--FFPKSCCTSVNEVICHGI 188 (370)
Q Consensus 111 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~--~fp~~v~ss~n~~~~Hg~ 188 (370)
+.|||++||+.||+|++|++++++++.+.++||+||.||+++++..+.+.|+.|+.++|. +||.++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 479999999999999999999999999999999999999999999889999988877774 599999999999999999
Q ss_pred CCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC
Q 017489 189 PDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF 268 (370)
Q Consensus 189 p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~ 268 (370)
|++++|++||+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++|+
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~ 200 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGF 200 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCC-CCceEEeeCCeeeEEEeEEEEEe
Q 017489 269 SVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWP-DGWTAVTADGKRSAQFEHTLLVT 347 (370)
Q Consensus 269 ~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wp-d~wt~~t~~g~~~~~~EdtvlVT 347 (370)
....+++|||||+.+||.|.++.+ ++.+..+|++||||+|||+++.+.+....++ |+|++.+.||..++|+||||+||
T Consensus 201 ~~~~~~~GHgIGl~~hE~P~i~~~-~~~~~~~L~~GMV~~iEP~i~~~~~~g~~~~~~~~~~~~~~g~~~~~~edtv~VT 279 (291)
T PRK12318 201 SVVDQFVGHGVGIKFHENPYVPHH-RNSSKIPLAPGMIFTIEPMINVGKKEGVIDPINHWEARTCDNQPSAQWEHTILIT 279 (291)
T ss_pred ccCCCcccCCcCccccCCCcccCc-CCCCCCEeCCCCEEEECCEEEcCCCceEEecCCCcEEEecCCCeeeeeeeEEEEc
Confidence 987889999999999999999865 3455689999999999999998655444444 88999999999999999999999
Q ss_pred CCCeeecCCC
Q 017489 348 ETGVEVLTAR 357 (370)
Q Consensus 348 e~G~EvLT~~ 357 (370)
++|+|+||..
T Consensus 280 e~G~e~LT~~ 289 (291)
T PRK12318 280 ETGYEILTLL 289 (291)
T ss_pred CCcceeCCCC
Confidence 9999999985
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=1.4e-54 Score=408.42 Aligned_cols=249 Identities=53% Similarity=0.860 Sum_probs=236.2
Q ss_pred cccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCC
Q 017489 110 VVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIP 189 (370)
Q Consensus 110 ~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p 189 (370)
+..|||++||+.||+|++++.++++.+.+.++||+|+.||++.+.+.+.++|+.+...++..||.++++|.|+..+|+.|
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~ 81 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIP 81 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCC
Confidence 35799999999999999999999999999999999999999999999999999877666778988999999999999999
Q ss_pred CCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCc
Q 017489 190 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS 269 (370)
Q Consensus 190 ~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~ 269 (370)
++++|++||+|.+|+++.++||++|++|||++|++++++++++++++++++++++++|||++++||+++++++++++|+.
T Consensus 82 ~~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~ 161 (252)
T PRK05716 82 SDKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFS 161 (252)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCC
Q 017489 270 VVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTET 349 (370)
Q Consensus 270 ~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~ 349 (370)
..++++|||||+.+||.|.++.+...+++.+|+|||||+|||+++.+.+....|+|+|+..+++|.+++++||||+||++
T Consensus 162 ~~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~~ 241 (252)
T PRK05716 162 VVREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTED 241 (252)
T ss_pred eecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcCC
Confidence 88889999999999999998876556778899999999999999998888889999999999999999999999999999
Q ss_pred CeeecCCCC
Q 017489 350 GVEVLTARL 358 (370)
Q Consensus 350 G~EvLT~~~ 358 (370)
|+|+||...
T Consensus 242 G~e~Lt~~~ 250 (252)
T PRK05716 242 GPEILTLRP 250 (252)
T ss_pred ccEEeeCCC
Confidence 999999863
No 10
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=8.9e-51 Score=379.50 Aligned_cols=238 Identities=55% Similarity=0.890 Sum_probs=226.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
|+.||+|+++++++++.+.+.++||+||.||++.+.+.+.++|+.+..+++..||..+++|.|+.++|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988778888998999999999999999999999999
Q ss_pred eeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeee
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHG 278 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHG 278 (370)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998777889999
Q ss_pred cccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecCC
Q 017489 279 IGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 279 IG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~ 356 (370)
||+.+||.|.+..+..+.++.+|++||||+|||+++.+.+....|+++|+..+.+|.+++|+||||+||++|+|+||.
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte~G~e~Lt~ 238 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITEDGPEILTL 238 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcCCcceeCCC
Confidence 999999999987555566778999999999999999988888889999999999999999999999999999999984
No 11
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=2e-49 Score=392.53 Aligned_cols=225 Identities=26% Similarity=0.421 Sum_probs=207.9
Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCcccc
Q 017489 107 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 186 (370)
Q Consensus 107 ~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~H 186 (370)
...+|+|||++||+.||+|++|++++++.+.+.++||+||.||++.++..+.++|+.+. .|++++++|.|+..+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEeccccccC
Confidence 45689999999999999999999999999999999999999999999999999998753 5888999999999999
Q ss_pred CCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecC--CCHH---HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 017489 187 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGN--ADEA---SRQLVQCTYECLEKAISIVKPGVRFREIGEVINR 261 (370)
Q Consensus 187 g~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~--~~~~---~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~ 261 (370)
+.|++++|++||+|++|+|+.|+||++|++|||++|. ++++ ++++|+++.++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999973 3333 7899999999999999999999999999999999
Q ss_pred HHHHcCCc-eeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEE
Q 017489 262 HATMSGFS-VVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQF 340 (370)
Q Consensus 262 ~~~~~G~~-~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~ 340 (370)
++++.||. ...+.+|||||+.+||.|.+. .++..+|++||||+|||+++. +|.+++|+
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~----~~~~~~l~~gmv~~iEpgiy~-----------------~~~~gvri 334 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFS----PRDTTTLQPGMLLTVEPGIYL-----------------PGQGGVRI 334 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcC----CCCCCCcCCCCEEEECCEEEe-----------------CCCCEEEE
Confidence 99999997 356779999999999999985 356789999999999999986 46678999
Q ss_pred eEEEEEeCCCeeecCCC
Q 017489 341 EHTLLVTETGVEVLTAR 357 (370)
Q Consensus 341 EdtvlVTe~G~EvLT~~ 357 (370)
||||+||++|+|+||..
T Consensus 335 Ed~v~vt~~G~e~Lt~~ 351 (361)
T PRK09795 335 EDVVLVTPQGAEVLYAM 351 (361)
T ss_pred eeEEEECCCCcEeCcCC
Confidence 99999999999999975
No 12
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=2.5e-48 Score=393.15 Aligned_cols=241 Identities=24% Similarity=0.353 Sum_probs=211.4
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccC
Q 017489 108 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 187 (370)
Q Consensus 108 ~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg 187 (370)
..+|+|||++||+.||+|++++.+++.++++.++||+||.||++.+...+.++|+... .|+++|++|.|..++|+
T Consensus 168 ~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~na~~~H~ 242 (438)
T PRK10879 168 HEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGENGCILHY 242 (438)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCccccccC
Confidence 4479999999999999999999999999999999999999999999999999997532 48889999999999999
Q ss_pred CCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEe-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH--
Q 017489 188 IPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT-- 264 (370)
Q Consensus 188 ~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~v-G~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~-- 264 (370)
.|++++|++||+|++|+|+.++||++|++|||+| |+++++++++|++++++++++++++|||+++++|++++.+++.
T Consensus 243 ~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~ 322 (438)
T PRK10879 243 TENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSG 322 (438)
T ss_pred CCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 8999999999999999999999999999999999999887653
Q ss_pred --HcC--------------Cc-eeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCc
Q 017489 265 --MSG--------------FS-VVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGW 327 (370)
Q Consensus 265 --~~G--------------~~-~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~w 327 (370)
+.| +. ...|.+||+||+.+|+.|.+. .++..+|+|||||||||++|... +..+|+.|
T Consensus 323 l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~----~~~~~~L~~GmV~tvEPgiY~~~--~~~~~~~~ 396 (438)
T PRK10879 323 LVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG----QDRSRILEPGMVLTVEPGLYIAP--DADVPEQY 396 (438)
T ss_pred HHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC----CCCCCcCCCCCEEEECCEEEECC--CcCccccc
Confidence 233 32 234668999999999988764 34567999999999999998742 12234332
Q ss_pred eEEeeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCcc
Q 017489 328 TAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPKVY 365 (370)
Q Consensus 328 t~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~~ 365 (370)
...|+|+||||+||++|+|+||...|++++++
T Consensus 397 ------~~~GiRiED~VlVT~~G~e~LT~~~pk~~~~i 428 (438)
T PRK10879 397 ------RGIGIRIEDDIVITETGNENLTASVVKKPDEI 428 (438)
T ss_pred ------CccEEEeccEEEECCCcCeEcCccCCCCHHHH
Confidence 34589999999999999999999999998754
No 13
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-48 Score=384.61 Aligned_cols=230 Identities=32% Similarity=0.501 Sum_probs=213.1
Q ss_pred CccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccc
Q 017489 106 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 185 (370)
Q Consensus 106 ~~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~ 185 (370)
....+|+|||+.||+.||+|+++++.++..+++.++||+||.||.+.++..+++.|+... .|+++|++|.|+.++
T Consensus 147 ~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~n~a~p 221 (384)
T COG0006 147 LVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGENAALP 221 (384)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEeccccccCc
Confidence 346689999999999999999999999999999999999999999999999999997542 488999999999999
Q ss_pred cCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017489 186 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 265 (370)
Q Consensus 186 Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~ 265 (370)
|+.|+++++++||+|+||+|+.|+||++|++|||.+|+++++++++|+.+.++++++++++|||++++||+.++++++.+
T Consensus 222 H~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~ 301 (384)
T COG0006 222 HYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEK 301 (384)
T ss_pred CCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCce-eccceeeecc--cccccCCC-CCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEe
Q 017489 266 SGFSV-VKSYCGHGIG--ELFHCAPN-IPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFE 341 (370)
Q Consensus 266 ~G~~~-~~~~~GHGIG--~~~he~P~-i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~E 341 (370)
.|+.. ..+.+|||+| +.+||.|. +. +++..+|+||||||+||+++. +|.+|+++|
T Consensus 302 ~g~~~~~~h~~GHgvG~~l~vhE~p~~~~----~~~~~~L~~GMv~t~Epg~y~-----------------~g~~GirIE 360 (384)
T COG0006 302 AGYGLYFLHGTGHGVGFVLDVHEHPQYLS----PGSDTTLEPGMVFSIEPGIYI-----------------PGGGGVRIE 360 (384)
T ss_pred cCCcccccCCccccCCCCcccCcCccccC----CCCCccccCCcEEEecccccc-----------------CCCceEEEE
Confidence 88763 3455899999 99999995 54 467789999999999998876 588999999
Q ss_pred EEEEEeCCCeeecCCCCCCCC
Q 017489 342 HTLLVTETGVEVLTARLPSSP 362 (370)
Q Consensus 342 dtvlVTe~G~EvLT~~~~~~~ 362 (370)
|+|+||++|+|+|| ..|+..
T Consensus 361 d~vlVte~G~e~LT-~~~~~~ 380 (384)
T COG0006 361 DTVLVTEDGFEVLT-RVPKEL 380 (384)
T ss_pred EEEEEcCCCceecc-cCCcce
Confidence 99999999999999 767654
No 14
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=2.6e-47 Score=354.86 Aligned_cols=225 Identities=22% Similarity=0.258 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCC-CCCCcCCceeeeCCCCccccCCCCCCCCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSP-LNYHFFPKSCCTSVNEVICHGIPDSRKLEDG 197 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~-l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~G 197 (370)
|++||+|++|++++++++.+.++||+||.||++.+++++.+.|+...+ ..+..+.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 1233344578999999999999999999999
Q ss_pred CeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCcee-cccee
Q 017489 198 DIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVV-KSYCG 276 (370)
Q Consensus 198 DiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~-~~~~G 276 (370)
|+|++|+++.++||++|++|||++|+++++++++++++.+|++++++++|||++++||+++++++++++|+... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999854 45589
Q ss_pred eecccccccCCCC-CCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecC
Q 017489 277 HGIGELFHCAPNI-PHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLT 355 (370)
Q Consensus 277 HGIG~~~he~P~i-~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT 355 (370)
||||+.+||.|.- ......+++.+|+|||||+|||+++.+.+ .+|.+++++||||+||++|+|+||
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~-------------~~g~gG~ried~v~Vt~~G~e~Lt 227 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEG-------------QPGAGGYREHDILVINENGAENIT 227 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeeccc-------------CCCCcEEEeeeEEEECCCccccCc
Confidence 9999999998632 10111355689999999999999986311 136789999999999999999998
Q ss_pred C
Q 017489 356 A 356 (370)
Q Consensus 356 ~ 356 (370)
.
T Consensus 228 ~ 228 (228)
T cd01090 228 G 228 (228)
T ss_pred C
Confidence 4
No 15
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=5.4e-47 Score=355.32 Aligned_cols=223 Identities=27% Similarity=0.329 Sum_probs=197.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
|++||+|+++++++++++.+.++||+||.||++.+++++.++|+.+ .|+.++++|.|...+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999873 3788999999999999999999999999
Q ss_pred eeEEEEeeeeCCEEeeeeceEEe-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC---------
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF--------- 268 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~v-G~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~--------- 268 (370)
+|++|+++.|+||++|++|||++ |++++++++++++++++++++++++|||++++||++++++++++.++
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 69999999999999999999999999999999999999999987632
Q ss_pred ----------ceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeE
Q 017489 269 ----------SVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSA 338 (370)
Q Consensus 269 ----------~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~ 338 (370)
....+.+|||||+.+||.|.+.. .+++..+|++||||+|||+++.+...... ++. .+.+++
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~--~~~~~~~l~~GMv~~iEp~iy~~~~~~~~-~~~------~~~~g~ 225 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR--YLRRARPLEPGMVITIEPGIYFIPDLLDV-PEY------FRGGGI 225 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc--cCCCCCCCCCCCEEEECCEEEeCCccccc-ccc------cceeEE
Confidence 23456699999999999997721 14567899999999999999874321111 222 256899
Q ss_pred EEeEEEEEeCCCeeecCC
Q 017489 339 QFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 339 ~~EdtvlVTe~G~EvLT~ 356 (370)
|+||||+||++|+|+||.
T Consensus 226 ~ied~v~Vt~~G~e~Lt~ 243 (243)
T cd01087 226 RIEDDVLVTEDGPENLTR 243 (243)
T ss_pred EeeeEEEEcCCcceeCcC
Confidence 999999999999999985
No 16
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=1.1e-46 Score=367.64 Aligned_cols=228 Identities=24% Similarity=0.382 Sum_probs=203.5
Q ss_pred CccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccc
Q 017489 106 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVIC 185 (370)
Q Consensus 106 ~~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~ 185 (370)
.+..+|.|||++||+.||+|++++.++++.+.+.++||+||.||++.++.++.+.|... +..|+ .+.+|.+ ..+
T Consensus 88 ~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~~-~i~~G~~-~~~ 161 (323)
T PRK15173 88 IFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRFH-LISVGAD-FSP 161 (323)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCCc-EEEECCC-Ccc
Confidence 34678999999999999999999999999999999999999999999988888776532 12233 5666666 568
Q ss_pred cCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017489 186 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 265 (370)
Q Consensus 186 Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~ 265 (370)
|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++
T Consensus 162 h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~ 241 (323)
T PRK15173 162 KLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKK 241 (323)
T ss_pred CCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCc-eeccceeeeccc--ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeE
Q 017489 266 SGFS-VVKSYCGHGIGE--LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEH 342 (370)
Q Consensus 266 ~G~~-~~~~~~GHGIG~--~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~Ed 342 (370)
.|+. ..++++|||||+ .+||.|.+.. +++.+|++||||+|||+++. .|.+++++||
T Consensus 242 ~G~~~~~~~~~GHGiG~~lg~~E~P~i~~----~~~~~Le~GMV~tiEPgiy~-----------------~g~ggvriED 300 (323)
T PRK15173 242 SGLPNYNRGHLGHGNGVFLGLEESPFVST----HATESFTSGMVLSLETPYYG-----------------YNLGSIMIED 300 (323)
T ss_pred cCCccccCCCCCCcCCCCCCcCCCCCCCC----CCCCccCCCCEEEECCEEEc-----------------CCCcEEEEee
Confidence 9997 566789999996 7899999863 45679999999999999875 3567899999
Q ss_pred EEEEeCCCeeecCCCCCCC
Q 017489 343 TLLVTETGVEVLTARLPSS 361 (370)
Q Consensus 343 tvlVTe~G~EvLT~~~~~~ 361 (370)
||+||++|+|+||. .|++
T Consensus 301 tvlVTe~G~e~LT~-~p~~ 318 (323)
T PRK15173 301 MILINKEGIEFLSK-LPRD 318 (323)
T ss_pred EEEEcCCcceeCCC-CCcc
Confidence 99999999999997 4443
No 17
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=2.8e-46 Score=373.61 Aligned_cols=231 Identities=21% Similarity=0.279 Sum_probs=199.5
Q ss_pred CccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc-CCCCCCCCCCcCCceeeeCCCCcc
Q 017489 106 DLQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA-GGYPSPLNYHFFPKSCCTSVNEVI 184 (370)
Q Consensus 106 ~~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~-g~~ps~l~~~~fp~~v~ss~n~~~ 184 (370)
.+..+|+|||++||++||+|++|++++++.+.+.++||+||.||++.+....... ..+.+ .+..|.+++.+|.|+..
T Consensus 151 ~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~--~~~~~~~iv~sG~~~a~ 228 (391)
T TIGR02993 151 LVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGG--DYPAIVPLLPSGADASA 228 (391)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCC--CcCCcccccccCccccC
Confidence 3466899999999999999999999999999999999999999999886554321 10110 12235557779999999
Q ss_pred ccCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 017489 185 CHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 264 (370)
Q Consensus 185 ~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~ 264 (370)
+|+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+++++|++++++++|||++++||+++++++++
T Consensus 229 pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~ 308 (391)
T TIGR02993 229 PHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLK 308 (391)
T ss_pred CCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCceeccceeeecccccccC-----CCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEE
Q 017489 265 MSGFSVVKSYCGHGIGELFHCA-----PNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQ 339 (370)
Q Consensus 265 ~~G~~~~~~~~GHGIG~~~he~-----P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~ 339 (370)
++|+.. .+++|||||+.+|+. |.+. .++..+|++||||||||+++. +| .|++
T Consensus 309 ~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~----~~~~~~L~~GMv~tvEpgiy~-----------------~~-~Gvr 365 (391)
T TIGR02993 309 KYGIHK-DSRTGYPIGLSYPPDWGERTMSLR----PGDNTVLKPGMTFHFMTGLWM-----------------ED-WGLE 365 (391)
T ss_pred HcCCcc-CCCceeeeccCcCCCCCCcccccc----CCCCceecCCCEEEEcceeEe-----------------CC-CCeE
Confidence 999975 467999999998742 3443 456789999999999998886 23 3689
Q ss_pred EeEEEEEeCCCeeecCCCCCCCC
Q 017489 340 FEHTLLVTETGVEVLTARLPSSP 362 (370)
Q Consensus 340 ~EdtvlVTe~G~EvLT~~~~~~~ 362 (370)
+||||+||++|+|+||.. |++.
T Consensus 366 ied~v~VT~~G~e~Lt~~-p~~l 387 (391)
T TIGR02993 366 ITESILITETGVECLSSV-PRKL 387 (391)
T ss_pred EeeEEEECCCcceecccC-Cccc
Confidence 999999999999999974 5443
No 18
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=7.6e-46 Score=372.08 Aligned_cols=227 Identities=24% Similarity=0.377 Sum_probs=204.2
Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCcccc
Q 017489 107 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 186 (370)
Q Consensus 107 ~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~H 186 (370)
+..+|+|||++||+.||+|+++++++++.+.+.++||+||.||++.++.++.+.|.... ..|+ ++.+|.+ ..+|
T Consensus 172 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~~-~v~~G~~-~~~h 245 (406)
T PRK14575 172 FNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRFH-LISVGAD-FSPK 245 (406)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcCc-eEEECCC-cccC
Confidence 45689999999999999999999999999999999999999999999998888776431 1233 5667776 5689
Q ss_pred CCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc
Q 017489 187 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 266 (370)
Q Consensus 187 g~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~ 266 (370)
+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.
T Consensus 246 ~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~ 325 (406)
T PRK14575 246 LIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKS 325 (406)
T ss_pred CCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc-eeccceeeeccc--ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEE
Q 017489 267 GFS-VVKSYCGHGIGE--LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHT 343 (370)
Q Consensus 267 G~~-~~~~~~GHGIG~--~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~Edt 343 (370)
|+. ..++++|||||+ .+||.|.+.. ++..+|++||||+|||+++. .|.+++++|||
T Consensus 326 G~~~~~~~~~GHGiG~~lg~~e~P~i~~----~~~~~Le~GMv~tiEpgiy~-----------------~g~gGvriEDt 384 (406)
T PRK14575 326 GLPNYNRGHLGHGNGVFLGLEESPFVST----HATESFTSGMVLSLETPYYG-----------------YNLGSIMIEDM 384 (406)
T ss_pred CCccccCCCCCCcccCCCCCccCCCCCC----CCCCCcCCCCEEEECCeeec-----------------CCCcEEEEEeE
Confidence 997 456789999995 7899999873 45689999999999999886 35678999999
Q ss_pred EEEeCCCeeecCCCCCCC
Q 017489 344 LLVTETGVEVLTARLPSS 361 (370)
Q Consensus 344 vlVTe~G~EvLT~~~~~~ 361 (370)
|+||++|+|+||. .|++
T Consensus 385 vlVT~~G~e~LT~-~p~~ 401 (406)
T PRK14575 385 ILINKEGIEFLSK-LPRD 401 (406)
T ss_pred EEEcCCCcccCCC-CCcc
Confidence 9999999999997 4554
No 19
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=4.4e-45 Score=363.09 Aligned_cols=245 Identities=20% Similarity=0.280 Sum_probs=216.9
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCC----CCcCCceeeeCCCCccccC
Q 017489 112 EIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLN----YHFFPKSCCTSVNEVICHG 187 (370)
Q Consensus 112 ~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~----~~~fp~~v~ss~n~~~~Hg 187 (370)
.+|+++||+.||+|++|++++++.+.+.++||+|+.||++.+++.+.+.++. ...+ +.+|+..+|+|+|+++||+
T Consensus 12 ~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H~ 90 (389)
T TIGR00495 12 SLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGHF 90 (389)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeCC
Confidence 6899999999999999999999999999999999999999999999887653 2111 2333333677899999999
Q ss_pred CC--C--CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHH
Q 017489 188 IP--D--SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGN-----ADEASRQLVQCTYECLEKAISIVKPGVRFREIGEV 258 (370)
Q Consensus 188 ~p--~--~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~-----~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~ 258 (370)
+| + +++|++||+|+||+|+.++||++|++|||+||+ ++++++++++++++|++++|+.+|||++++||+++
T Consensus 91 ~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~a 170 (389)
T TIGR00495 91 SPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTEA 170 (389)
T ss_pred CCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 99 2 489999999999999999999999999999995 56789999999999999999999999999999999
Q ss_pred HHHHHHHcCCceeccceeeeccccccc-CCCC-CCCCC----CCCCeeecCCcEEEEccccccCCcccccCCCCceE---
Q 017489 259 INRHATMSGFSVVKSYCGHGIGELFHC-APNI-PHYSR----NKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTA--- 329 (370)
Q Consensus 259 i~~~~~~~G~~~~~~~~GHGIG~~~he-~P~i-~~~~~----~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~--- 329 (370)
++++++++||.++++++|||||..+|+ .|.| +++.. ......|++||||+||||++.|.+....++|.||+
T Consensus 171 i~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~G~g~v~~~~~~~tiy~~ 250 (389)
T TIGR00495 171 INKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVSTGEGKAKDADQRTTIYKR 250 (389)
T ss_pred HHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecCCCceEEECCCeeEEEEE
Confidence 999999999999999999999999998 7875 55431 23457999999999999999999988888877764
Q ss_pred -----------------------------------------------------------EeeCCeeeEEEeEEEEEeCCC
Q 017489 330 -----------------------------------------------------------VTADGKRSAQFEHTLLVTETG 350 (370)
Q Consensus 330 -----------------------------------------------------------~t~~g~~~~~~EdtvlVTe~G 350 (370)
..++|...+|||+||+|+++|
T Consensus 251 ~~~~~y~lk~~~sr~~l~ei~~~f~~~PF~~R~l~~~~~~~~gl~e~~~~~~l~~ypvl~e~~g~~Vaqf~~Tv~v~~~g 330 (389)
T TIGR00495 251 DPSKTYGLKMKASRAFFSEIERRFDAMPFTLRNFEDEKRARMGLVECVKHELLQPYPVLYEKEGEFVAQFKFTVLLMPNG 330 (389)
T ss_pred CCCCCcCCCCHHHHHHHHHHHHhCCCCCcchHHhcchhhHHHHHHHHHHCCCcccCCceEeeCCCeEEEEEEEEEECCCC
Confidence 456799999999999999999
Q ss_pred eeecCCC
Q 017489 351 VEVLTAR 357 (370)
Q Consensus 351 ~EvLT~~ 357 (370)
+++||..
T Consensus 331 ~~~~t~~ 337 (389)
T TIGR00495 331 PMRITSG 337 (389)
T ss_pred cEEeCCC
Confidence 9999985
No 20
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.9e-45 Score=367.72 Aligned_cols=227 Identities=23% Similarity=0.351 Sum_probs=205.4
Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCcccc
Q 017489 107 LQHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH 186 (370)
Q Consensus 107 ~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~H 186 (370)
+..+|+|||++||+.||+|++++++++..+.+.++||+||.||++.++..+.+.|... +..| ..+++|.| ..+|
T Consensus 171 l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~h 244 (405)
T PRK14576 171 FNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FSPK 244 (405)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-ccCC
Confidence 4678999999999999999999999999999999999999999999999999887531 1123 46788887 5689
Q ss_pred CCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc
Q 017489 187 GIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS 266 (370)
Q Consensus 187 g~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~ 266 (370)
+.|++++|++||+|++|+++.|+||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++++++++
T Consensus 245 ~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~ 324 (405)
T PRK14576 245 IIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTS 324 (405)
T ss_pred CCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCc-eeccceeeecc--cccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEE
Q 017489 267 GFS-VVKSYCGHGIG--ELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHT 343 (370)
Q Consensus 267 G~~-~~~~~~GHGIG--~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~Edt 343 (370)
|+. ..++++||||| +.+||.|.+. ++++.+|++||||+|||+++. .|.+++++|||
T Consensus 325 G~~~~~~~~~GHgiG~~l~~~e~P~i~----~~~~~~Le~GMv~~vEp~~y~-----------------~g~ggvriEDt 383 (405)
T PRK14576 325 GLPHYNRGHLGHGDGVFLGLEEVPFVS----TQATETFCPGMVLSLETPYYG-----------------IGVGSIMLEDM 383 (405)
T ss_pred CCccccCCCCCCCCCCCCCcCcCCCcC----CCCCCccCCCCEEEECCceee-----------------cCCCEEEEeeE
Confidence 997 45678999999 7889999875 356689999999999998775 47789999999
Q ss_pred EEEeCCCeeecCCCCCCC
Q 017489 344 LLVTETGVEVLTARLPSS 361 (370)
Q Consensus 344 vlVTe~G~EvLT~~~~~~ 361 (370)
|+||++|+|+||.. |++
T Consensus 384 vlVTe~G~e~LT~~-p~~ 400 (405)
T PRK14576 384 ILITDSGFEFLSKL-DRD 400 (405)
T ss_pred EEECCCccccCCCC-Ccc
Confidence 99999999999985 443
No 21
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=1.3e-43 Score=323.36 Aligned_cols=207 Identities=31% Similarity=0.505 Sum_probs=192.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
|++||+|++++++++.++.+.++||+||.||++.++..+.++|+.+ .+||+.+++|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999874 25889999999999999999999999999
Q ss_pred eeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCce-eccceee
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV-VKSYCGH 277 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~GH 277 (370)
+|++|+++.++||++|++||+++|+++++++++++++.++++++++.+|||++++||+++++++++++|+.. ..+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999863 3456999
Q ss_pred ecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCe
Q 017489 278 GIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGV 351 (370)
Q Consensus 278 GIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~ 351 (370)
|||+.+||.|.+. ++++.+|++||||+|||+++. +|.+++++||||+||++|+
T Consensus 156 ~iG~~~~e~p~i~----~~~~~~l~~gmv~~iep~~~~-----------------~~~~g~~~ed~v~vt~~g~ 208 (208)
T cd01092 156 GVGLEVHEAPYIS----PGSDDVLEEGMVFTIEPGIYI-----------------PGKGGVRIEDDVLVTEDGC 208 (208)
T ss_pred ccCcccCcCCCcC----CCCCCCcCCCCEEEECCeEEe-----------------cCCCEEEeeeEEEECCCCC
Confidence 9999999999875 356789999999999998875 4667899999999999995
No 22
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=2.9e-43 Score=356.05 Aligned_cols=244 Identities=20% Similarity=0.202 Sum_probs=195.2
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccC
Q 017489 108 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 187 (370)
Q Consensus 108 ~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg 187 (370)
..+|+|||++||+.||+|++++.++++.+++.++||+||.||++.+.... ..++ . ...|+.++++|.|+.++|+
T Consensus 156 ~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~--~---~~~y~~iva~G~naa~~H~ 229 (443)
T PRK13607 156 HYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRD--N---DVPYGNIVALNEHAAVLHY 229 (443)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCC--c---CCCCCcEEEecCcceEecC
Confidence 45799999999999999999999999999999999999999998654332 2222 1 2358889999999999999
Q ss_pred CCCCC-CCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH---
Q 017489 188 IPDSR-KLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA--- 263 (370)
Q Consensus 188 ~p~~r-~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~--- 263 (370)
.|+++ ++++||+|++|+|+.++||++|++|||+ |+++++++++|+++.+|++++++++|||++++||+.++++++
T Consensus 230 ~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~ 308 (443)
T PRK13607 230 TKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKL 308 (443)
T ss_pred CccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHH
Confidence 99874 6899999999999999999999999999 888999999999999999999999999999999999988665
Q ss_pred -HHcCCc----------------eeccceeeecccccccCCCCCCC------------CCCCCCeeecCCcEEEEccccc
Q 017489 264 -TMSGFS----------------VVKSYCGHGIGELFHCAPNIPHY------------SRNKAVGVMKVGQTFTIEPMIN 314 (370)
Q Consensus 264 -~~~G~~----------------~~~~~~GHGIG~~~he~P~i~~~------------~~~~~~~~l~~GmvftIEP~i~ 314 (370)
.+.|+. ...|.+||+||+.+|+.+.+..+ ..-....+|+|||||||||++|
T Consensus 309 L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY 388 (443)
T PRK13607 309 LRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLY 388 (443)
T ss_pred HHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCeee
Confidence 445443 33567999999999998654211 0012447999999999999998
Q ss_pred cCCcccccCCC-------CceEE-eeCCeeeEEEeEEEEEeCCCeeecCCCC
Q 017489 315 AGVWRDRMWPD-------GWTAV-TADGKRSAQFEHTLLVTETGVEVLTARL 358 (370)
Q Consensus 315 ~g~~~~~~wpd-------~wt~~-t~~g~~~~~~EdtvlVTe~G~EvLT~~~ 358 (370)
....-...|.+ +|..+ .-.+.+|+|+||+||||++|+|+||...
T Consensus 389 ~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vlVT~~G~e~Lt~~~ 440 (443)
T PRK13607 389 FIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVVVHENGVENMTRDL 440 (443)
T ss_pred eChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEEEcCCCCeECChhh
Confidence 73210011111 12111 0125679999999999999999999753
No 23
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=9.7e-43 Score=349.41 Aligned_cols=237 Identities=24% Similarity=0.306 Sum_probs=205.2
Q ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHc----CCCCCCCCCCcCCceeeeCCCCcccc
Q 017489 111 VEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITA----GGYPSPLNYHFFPKSCCTSVNEVICH 186 (370)
Q Consensus 111 r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~----g~~ps~l~~~~fp~~v~ss~n~~~~H 186 (370)
+..+|++||+.||+|++|++++++.+.+.|+||||+.||+..++..+++. |+.. +.+||+ |+|.|++.+|
T Consensus 150 ~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~----g~aFPt--~vS~N~~aaH 223 (470)
T PTZ00053 150 LEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKC----GWAFPT--GCSLNHCAAH 223 (470)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcc----cCCCCc--eeecCccccC
Confidence 45689999999999999999999999999999999999999888876554 5432 357997 5589999999
Q ss_pred CCCC---CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Q 017489 187 GIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHA 263 (370)
Q Consensus 187 g~p~---~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~ 263 (370)
++|+ +++|++||+|+||+|+.++||++|++|||++| ++++++++++++|+++||++++||++++||++++++++
T Consensus 224 ~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevi 300 (470)
T PTZ00053 224 YTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVI 300 (470)
T ss_pred CCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 9995 78999999999999999999999999999997 68899999999999999999999999999999999999
Q ss_pred HHcCCc---------eeccceeeeccc-ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCccccc-----------
Q 017489 264 TMSGFS---------VVKSYCGHGIGE-LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRM----------- 322 (370)
Q Consensus 264 ~~~G~~---------~~~~~~GHGIG~-~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~----------- 322 (370)
+++||. ++++++|||||+ .+|+.|.+|.+. +++..+|++||||+|||+++.|......
T Consensus 301 es~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~-~~~~~~LeeGmVfaIEPf~stG~G~v~~~~~~siY~~~~ 379 (470)
T PTZ00053 301 ESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVK-GGENTRMEEGELFAIETFASTGRGYVNEDLECSHYMKDP 379 (470)
T ss_pred HHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeC-CCCCCEecCCCEEEEcceeeCCCCeEecCCCceeeeEcC
Confidence 999973 468999999998 899988888764 4566899999999999999998762210
Q ss_pred -------------------------CCC--Cc----e----------------------EEeeCCeeeEEEeEEEEEeCC
Q 017489 323 -------------------------WPD--GW----T----------------------AVTADGKRSAQFEHTLLVTET 349 (370)
Q Consensus 323 -------------------------wpd--~w----t----------------------~~t~~g~~~~~~EdtvlVTe~ 349 (370)
.|. .| + ++.++|.+.+||||||||+++
T Consensus 380 ~~~~~~lk~~~ar~ll~~I~~~f~tlPF~~R~l~~~~~~~~~~gl~~lv~~giv~~Yp~L~e~~G~~VAQfehTvll~p~ 459 (470)
T PTZ00053 380 GAEFVPLRLPKAKQLLKHINTNFGTLAFCRRWLDRLGQDRHLLALKQLVDAGIVNPYPPLCDVRGSYTSQMEHTILLRPT 459 (470)
T ss_pred cCCcCCCCCHHHHHHHHHHHHHCCCCCcchhhhhccchhHHHHHHHHHHHCCCcccCCccCccCCCEEeEEEEEEEECCC
Confidence 110 01 0 145689999999999999999
Q ss_pred CeeecCCC
Q 017489 350 GVEVLTAR 357 (370)
Q Consensus 350 G~EvLT~~ 357 (370)
|.|+||+.
T Consensus 460 ~~~vis~g 467 (470)
T PTZ00053 460 CKEVLSRG 467 (470)
T ss_pred CCEecCCC
Confidence 99999975
No 24
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=2.3e-42 Score=320.75 Aligned_cols=209 Identities=19% Similarity=0.205 Sum_probs=185.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCC--CCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC---CCCC
Q 017489 120 ERMRETCRIAREVLDAAARMIRPG--VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SRKL 194 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pG--vTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~---~r~L 194 (370)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+||++||+|.|+.++|++|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 356666666 59999999999999 9999999999988877765532 358999999999999999998 9999
Q ss_pred CCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHHHHcCCceecc
Q 017489 195 EDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIV-KPGVRFREIGEVINRHATMSGFSVVKS 273 (370)
Q Consensus 195 ~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~-kPG~~~~dI~~~i~~~~~~~G~~~~~~ 273 (370)
++||+|++|+++.++||++|++|||++|+++++++++++++++++.++++.+ +||+++++|.+++++.+.+.|+.. .+
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~-~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDY-GH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCC-CC
Confidence 9999999999999999999999999999999999999999999999999988 599999999999999999999863 35
Q ss_pred ceeeecc--cccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCe
Q 017489 274 YCGHGIG--ELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGV 351 (370)
Q Consensus 274 ~~GHGIG--~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~ 351 (370)
++||||| +.+||.|.++ +. .++..+|+|||||||||+++. +|..++++||||+||++|+
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~-~~~~~~L~~GmvftiEP~iy~-----------------~g~~gvried~v~Vt~~G~ 219 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SP-APNNVPLKAGMILSNEPGYYK-----------------EGKYGIRIENLVLVVEAET 219 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-Cc-CCCCCCcCCCCEEEECCEeEe-----------------CCCeEEEeeEEEEEeeCCc
Confidence 6999999 5789999885 21 345689999999999999986 4678899999999999997
Q ss_pred ee
Q 017489 352 EV 353 (370)
Q Consensus 352 Ev 353 (370)
.-
T Consensus 220 ~~ 221 (224)
T cd01085 220 TE 221 (224)
T ss_pred CC
Confidence 54
No 25
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1e-41 Score=328.09 Aligned_cols=227 Identities=33% Similarity=0.547 Sum_probs=200.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC---CCCC
Q 017489 118 QIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SRKL 194 (370)
Q Consensus 118 EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~---~r~L 194 (370)
+|++||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.++ ||.. .|.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~--vs~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCN--ISINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCE--EeeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 8854 4678889999985 6899
Q ss_pred CCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccc
Q 017489 195 EDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSY 274 (370)
Q Consensus 195 ~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~ 274 (370)
++||+|++|+|+.++||++|++||+++| ++++++++++++|++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeeccc-ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccc--------------------------------
Q 017489 275 CGHGIGE-LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDR-------------------------------- 321 (370)
Q Consensus 275 ~GHGIG~-~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~-------------------------------- 321 (370)
+|||||+ .+|+.|.+|.+. ..+..+|++||||+|||+++.|.....
T Consensus 150 ~GHgiG~~~~he~p~ip~~~-~~~~~~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~~~~i~~~~ 228 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYD-EGGGVKLEEGDVYAIEPFATDGEGKVVEGPEVEIYSLLRNRPVRLPAARKLLEEIEEEY 228 (291)
T ss_pred cccCcCCCcccCCCccCccC-CCCCceeCCCCEEEEcceEECCCCeEecCCceEEEeecCCCCCCCHHHHHHHHHHHHHC
Confidence 9999997 799999998753 456789999999999999988865221
Q ss_pred -cCCC--Cc-----e--------------------EEeeCCeeeEEEeEEEEEeCCCeeecCC
Q 017489 322 -MWPD--GW-----T--------------------AVTADGKRSAQFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 322 -~wpd--~w-----t--------------------~~t~~g~~~~~~EdtvlVTe~G~EvLT~ 356 (370)
+.|. .| . ++.++|...+||||||+||++|++++|.
T Consensus 229 ~~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~yp~l~e~~~~~vaq~~~Tv~v~~~g~~~~t~ 291 (291)
T PRK08671 229 NTLPFAERWLEGLFGEDKLELRRLLKAGALYGYPVLKEVKGGLVSQAEHTVIVTEDGCEVTTK 291 (291)
T ss_pred CCCCcchHHhhccchhhHHHHHHHHHCCCcccCCccEecCCCEEEEEEEEEEECCCCcEEecC
Confidence 1110 01 0 1567889999999999999999999984
No 26
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.3e-41 Score=310.62 Aligned_cols=204 Identities=35% Similarity=0.517 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHH-HHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 120 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEA-TITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~-~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
|+||+|+++++++++++++.++||+||.||.+.+.++ +.++|.. +.+||..+++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~-----~~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGE-----EPAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTT-----EESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCC-----cccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 5666743 235788999999999999999999999999
Q ss_pred eeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC-ceeccceee
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF-SVVKSYCGH 277 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 277 (370)
+|.+|+++.|+||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|+ ....+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 566778999
Q ss_pred ecccccccC-CCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 278 GIGELFHCA-PNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 278 GIG~~~he~-P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
|||+.+|+. |++.. .++..+|++||||+|||+++. .+|.+++++||||+|||
T Consensus 155 ~iG~~~~~~~P~i~~---~~~~~~l~~gmv~~iep~~~~----------------~~~~~g~~~ed~v~Vte 207 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR---PGDDTVLEPGMVFAIEPGLYF----------------IPGWGGVRFEDTVLVTE 207 (207)
T ss_dssp EESSSSSEEEEEESS---TTTSSB--TTBEEEEEEEEEE----------------ETTSEEEEEBEEEEEES
T ss_pred cccccccccceeeec---ccccceecCCCceeEeeeEEc----------------cCCCcEEEEEEEEEECc
Confidence 999999997 99863 357789999999999998763 14667999999999996
No 27
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=2.7e-41 Score=314.27 Aligned_cols=214 Identities=27% Similarity=0.413 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC--CCC-CCC--CCcCCceeeeCCCCccccCCC----
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGG--YPS-PLN--YHFFPKSCCTSVNEVICHGIP---- 189 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~--~ps-~l~--~~~fp~~v~ss~n~~~~Hg~p---- 189 (370)
+++||+|++|++++++.+.+.++||+|+.||++.++.++.+... ++. ..+ +..|| .|++.|+..+|+.|
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~--~~v~~n~~~~H~~p~~~~ 78 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFP--TCISVNNCVCHFSPLKSD 78 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcC--eEeccCceeecCCCCCCC
Confidence 36899999999999999999999999999998888777776322 322 122 23455 45567999999996
Q ss_pred CCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCH-----HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 017489 190 DSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADE-----ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHAT 264 (370)
Q Consensus 190 ~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~-----~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~ 264 (370)
++++|++||+|+||+|+.|+||++|++|||++|++++ ++++++++++++++++++++|||++++||+++++++++
T Consensus 79 ~~~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~ 158 (228)
T cd01089 79 ATYTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIV 158 (228)
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 7889999999999999999999999999999998874 89999999999999999999999999999999999999
Q ss_pred HcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEE
Q 017489 265 MSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTL 344 (370)
Q Consensus 265 ~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~Edtv 344 (370)
++||.++..++||++|..++..|... +-...|++||||++||+++. +|.+++|+||||
T Consensus 159 ~~G~~~~~~~~~h~~g~~~~~~~~~~-----~~~~~l~~gmvf~~ep~~~~-----------------~g~~~~~~~~Tv 216 (228)
T cd01089 159 DYGCTPVEGVLSHQLKRVVSSGEGKA-----KLVECVKHGLLFPYPVLYEK-----------------EGEVVAQFKLTV 216 (228)
T ss_pred HcCCEEecCccccCcCceEecCCCCc-----cchhhccCCcccccceeEcc-----------------CCCeEEEEEEEE
Confidence 99999999999999998554433221 12468999999999998876 688999999999
Q ss_pred EEeCCCeeecCC
Q 017489 345 LVTETGVEVLTA 356 (370)
Q Consensus 345 lVTe~G~EvLT~ 356 (370)
+||++|+|+||.
T Consensus 217 ~vt~~G~e~lt~ 228 (228)
T cd01089 217 LLTPNGVTVLTG 228 (228)
T ss_pred EEcCCCCeeCCC
Confidence 999999999984
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=5.8e-41 Score=323.26 Aligned_cols=229 Identities=30% Similarity=0.437 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC---CC
Q 017489 116 PDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SR 192 (370)
Q Consensus 116 ~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~---~r 192 (370)
-+||++||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.+ +||..+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4799999999999999999999999999999999999999999999986 488754 579999999995 67
Q ss_pred CCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceec
Q 017489 193 KLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVK 272 (370)
Q Consensus 193 ~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~ 272 (370)
+|++||+|++|+|+.++||++|++||+++|+ .++++++++++|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999995 3789999999999999999999999999999999999999999889
Q ss_pred cceeeeccc-ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccc------------------------------
Q 017489 273 SYCGHGIGE-LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDR------------------------------ 321 (370)
Q Consensus 273 ~~~GHGIG~-~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~------------------------------ 321 (370)
+++|||||. .+|+.+.+|.+. +++..+|++||||+|||+++.|.....
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~-~~~~~~le~GmV~aIEP~~~~G~G~v~~~~~~~iy~~~~~~~~k~~~~r~~l~~i~~ 229 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVK-ERDTTKLEEGDVVAIEPFATDGVGYVTDGGEVSIYAFLAERPVRLDSARNLLKTIDE 229 (295)
T ss_pred CCCCcceecccccCCCccCeec-CCCCCEeCCCCEEEEceeEECCcCeEecCCCeEEEeECCCCCCCCHHHHHHHHHHHH
Confidence 999999994 789988777553 345689999999999999988765221
Q ss_pred ---cCCC--Cc--------------------------eEEeeCCeeeEEEeEEEEEeCCCeeecCC
Q 017489 322 ---MWPD--GW--------------------------TAVTADGKRSAQFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 322 ---~wpd--~w--------------------------t~~t~~g~~~~~~EdtvlVTe~G~EvLT~ 356 (370)
+.|. .| -+..++|...+||||||+|+++|++++|.
T Consensus 230 ~~~~~pF~~r~l~~~~~~~~~~~l~~~~~~~~~~~yp~l~e~~g~~vaq~~~Tv~v~~~g~~~~t~ 295 (295)
T TIGR00501 230 NYGTLPFARRWLDKLGDEKYLFALNNLIRHGLIYDYPVLNEISGGYVAQWEHTILVEEHGKEVTTK 295 (295)
T ss_pred HCCCCCcchhHhcccchhHHHHHHHHHHHCCCccCCCccEeeCCCEEEEEEEEEEECCCccEEcCC
Confidence 1120 01 01567899999999999999999999984
No 29
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=1.1e-40 Score=320.90 Aligned_cols=226 Identities=32% Similarity=0.461 Sum_probs=199.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC---CCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD---SRKLE 195 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~---~r~L~ 195 (370)
++.||+|++|++++++++.+.++||+|+.||++.+++.+.++|+.++ ||. ++|.|+..+|+.|+ +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 774 56899999999996 48999
Q ss_pred CCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccce
Q 017489 196 DGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYC 275 (370)
Q Consensus 196 ~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~ 275 (370)
+||+|++|+|+.++||++|++||+++|+ .++++++++++|++++++++|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999889999
Q ss_pred eeeccc-ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccc---------------------------------
Q 017489 276 GHGIGE-LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDR--------------------------------- 321 (370)
Q Consensus 276 GHGIG~-~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~--------------------------------- 321 (370)
|||||+ .+|+.|.+|.+.. .+..+|++||||+|||+++.|.....
T Consensus 150 GHgig~~~~h~~~~ip~~~~-~~~~~le~gmV~aIEp~~s~G~G~v~~~~~~~iy~~~~~~~~~~~~~r~~~~~i~~~~~ 228 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKG-GEGTRLEEGDVYAIEPFATTGKGYVHDGPECSIYMLNRDKPLRLPRARKLLDVIYENFG 228 (291)
T ss_pred ccCccCccccCCCccCccCC-CCCCEeCCCCEEEEceeEECCCCeeecCCceEEEEEcCCCCCCCHHHHHHHHHHHHHCC
Confidence 999995 7999988876643 35689999999999999988865321
Q ss_pred cCC------CCc----------------------eEEeeCCeeeEEEeEEEEEeCCCeeecCC
Q 017489 322 MWP------DGW----------------------TAVTADGKRSAQFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 322 ~wp------d~w----------------------t~~t~~g~~~~~~EdtvlVTe~G~EvLT~ 356 (370)
+.| ++- -+..++|...+||||||+||++|++++|.
T Consensus 229 ~~pF~~r~l~~~~~~~~~~~~~~~~~~~~~~~y~~l~e~~g~~vaq~~~T~~v~~~g~~~~t~ 291 (291)
T cd01088 229 TLPFARRWLDRLGETKLLMALKNLCKAGIVYPYPVLKEISGGYVAQFEHTIIVREDGKEVTTR 291 (291)
T ss_pred CCCcChHHhhccchhhHHHHHHHHHHCCCcccCCccEeeCCCeEEEEEEEEEECCCCcEecCC
Confidence 111 110 01567899999999999999999999984
No 30
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=6.1e-41 Score=314.73 Aligned_cols=226 Identities=17% Similarity=0.197 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHHHHHHHHHH-----hccCC--CCHHHHHHHHHHHHHHcCCC-----CCCCCCCcCCceeeeCCCC-ccc
Q 017489 119 IERMRETCRIAREVLDAAAR-----MIRPG--VTTDEIDRVVHEATITAGGY-----PSPLNYHFFPKSCCTSVNE-VIC 185 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~-----~i~pG--vTe~Ei~~~v~~~~~~~g~~-----ps~l~~~~fp~~v~ss~n~-~~~ 185 (370)
++.||+|++++..+|...+. .|.+| +|+.+|+..++..+.+.+.. |+.+ -..||+++++|.|. ...
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~-~~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQL-DWCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHc-CcccCCeEeECcCcccCC
Confidence 46899999999999976655 89999 99999999999999887744 2222 24699999999998 899
Q ss_pred cCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017489 186 HGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 265 (370)
Q Consensus 186 Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~ 265 (370)
|+.++++.++.|++|.+|+|++|+|||+|++|||++| ++++++++|++++++++++++++|||++++||++++++++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred cCCcee---ccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeE
Q 017489 266 SGFSVV---KSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEH 342 (370)
Q Consensus 266 ~G~~~~---~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~Ed 342 (370)
.|.... .+.+|||||+++||.|.+.. .++..+|++||||+|||+++.-. ....+++ .++.+++++||
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~---~~~~~~L~~GMvf~vepGi~~~~-~~~~~~~------~~~~~gv~ieD 228 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIIN---AKNDRKLKKGMVFNLSIGFSNLQ-NPEPKDK------ESKTYALLLSD 228 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccC---CCCCCCcCCCCEEEEeCCccccc-CccccCc------cCCeeEEEEEE
Confidence 885543 34599999999999886532 35668999999999999987311 0011121 24678999999
Q ss_pred EEEEeCCCe-eecCC
Q 017489 343 TLLVTETGV-EVLTA 356 (370)
Q Consensus 343 tvlVTe~G~-EvLT~ 356 (370)
||+||++|+ |+||.
T Consensus 229 tV~Vt~~G~~~~LT~ 243 (243)
T cd01091 229 TILVTEDEPAIVLTN 243 (243)
T ss_pred EEEEcCCCCceecCC
Confidence 999999999 99984
No 31
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=2.5e-40 Score=298.82 Aligned_cols=206 Identities=33% Similarity=0.553 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 119 IERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 119 I~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|+++ .|+..+.+|.|...+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 3677788888889999999999999999
Q ss_pred eeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCC-ceeccceee
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGF-SVVKSYCGH 277 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 277 (370)
+|++|+++.++||++|++|||++|+++++++++++.+.++++++++.+|||+++.||++++++.++++|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 466778999
Q ss_pred ecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCe
Q 017489 278 GIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGV 351 (370)
Q Consensus 278 GIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~ 351 (370)
|||+.+||.|.+. .....+|++||+|+|||+++. ++.+++++||||+||++|+
T Consensus 155 ~iG~~~~e~~~~~----~~~~~~l~~gmv~~iep~~~~-----------------~~~~g~~~ed~v~vt~~g~ 207 (207)
T cd01066 155 GIGLEIHEPPVLK----AGDDTVLEPGMVFAVEPGLYL-----------------PGGGGVRIEDTVLVTEDGP 207 (207)
T ss_pred ccCcccCCCCCcC----CCCCCCcCCCCEEEECCEEEE-----------------CCCcEEEeeeEEEEeCCCC
Confidence 9999999999854 356679999999999998876 3467899999999999985
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=305.24 Aligned_cols=239 Identities=23% Similarity=0.315 Sum_probs=213.4
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccC
Q 017489 108 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 187 (370)
Q Consensus 108 ~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg 187 (370)
..+|.|||+.|++.||+||.|+.+++-..+..-|++..|..|.+.++..++.+|+.- .+||+.|+.|.|....|+
T Consensus 223 ~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tIHY 297 (488)
T KOG2414|consen 223 ERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTIHY 297 (488)
T ss_pred HHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceEEE
Confidence 457899999999999999999999999999999999999999999999999999975 479999999999999999
Q ss_pred CCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEe-cCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcHHHHHHHHHHHH-
Q 017489 188 IPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKP--GVRFREIGEVINRHA- 263 (370)
Q Consensus 188 ~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~v-G~~~~~~~~l~~~~~ea~~~ai~~~kP--G~~~~dI~~~i~~~~- 263 (370)
.-++..|+++|.|++|.|+.++||.+|++|||.+ |+.++.|++||+++...++..|+.|+| |.++++|+....+.+
T Consensus 298 ~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~ 377 (488)
T KOG2414|consen 298 VRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELLG 377 (488)
T ss_pred eecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 899999999999999999999999999 999999998766554
Q ss_pred ---HHcCCc------------eeccceeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCce
Q 017489 264 ---TMSGFS------------VVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWT 328 (370)
Q Consensus 264 ---~~~G~~------------~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt 328 (370)
++.|.. ...|+.||-+|+++|+-|.++.+ ..|+|||||||||++|.+. +..||..+
T Consensus 378 ~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~r~------~pL~pg~ViTIEPGvYIP~--d~d~P~~F- 448 (488)
T KOG2414|consen 378 QELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVSRD------IPLQPGMVITIEPGVYIPE--DDDPPEEF- 448 (488)
T ss_pred HHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCCCC------ccCCCCceEEecCceecCc--cCCCchHh-
Confidence 444542 23467899999999999999843 5899999999999999853 22456544
Q ss_pred EEeeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCcc
Q 017489 329 AVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPKVY 365 (370)
Q Consensus 329 ~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~~ 365 (370)
-..|+|+||.|+|+|+|.|+||..+|+++.++
T Consensus 449 -----rGIGiRIEDDV~i~edg~evLT~a~pKei~~i 480 (488)
T KOG2414|consen 449 -----RGIGIRIEDDVAIGEDGPEVLTAACPKEIIEI 480 (488)
T ss_pred -----cCceEEeecceEeccCCceeehhcccCCHHHH
Confidence 34689999999999999999999999988653
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=3.9e-35 Score=279.57 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=203.5
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccC
Q 017489 108 QHVVEIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHG 187 (370)
Q Consensus 108 ~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg 187 (370)
...|.|||+.||+.||.|++|+.++..+++++++||+.|.++...+......+|+... .+|..+||+|.|..+.|+
T Consensus 180 ~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~vLHY 255 (492)
T KOG2737|consen 180 AECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAVLHY 255 (492)
T ss_pred hhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcceeec
Confidence 4578999999999999999999999999999999999999999999988888887543 468889999999999998
Q ss_pred ----CCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEe-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Q 017489 188 ----IPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFV-GNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRH 262 (370)
Q Consensus 188 ----~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~v-G~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~ 262 (370)
.|+++.+|+||.+++|+|+.|.+|.+|++++|.+ |+.+++|+.+|+++.+++.++++++|||+...|++....++
T Consensus 256 gha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La~kv 335 (492)
T KOG2737|consen 256 GHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLAEKV 335 (492)
T ss_pred cccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHHHHH
Confidence 8999999999999999999999999999999999 89999999999999999999999999999999999876665
Q ss_pred H----HHcCCc---------------eeccceeeecccccccCCCCC-CCCCC--------CCCeeecCCcEEEEccccc
Q 017489 263 A----TMSGFS---------------VVKSYCGHGIGELFHCAPNIP-HYSRN--------KAVGVMKVGQTFTIEPMIN 314 (370)
Q Consensus 263 ~----~~~G~~---------------~~~~~~GHGIG~~~he~P~i~-~~~~~--------~~~~~l~~GmvftIEP~i~ 314 (370)
+ ++.|.- ...|-.||-||++.|+----| .+.++ ...+.|++|||+||||++|
T Consensus 336 lle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEPGcY 415 (492)
T KOG2737|consen 336 LLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEPGCY 415 (492)
T ss_pred HHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecCChh
Confidence 4 444431 223558999999999632211 22222 2446899999999999877
Q ss_pred cCCcc-cccCCCCceE--E------eeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCc
Q 017489 315 AGVWR-DRMWPDGWTA--V------TADGKRSAQFEHTLLVTETGVEVLTARLPSSPKV 364 (370)
Q Consensus 315 ~g~~~-~~~wpd~wt~--~------t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~ 364 (370)
+-.+- +....|--++ + --.+.+|+|+||.|+||++|+|.||. .|+.+.+
T Consensus 416 Fi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdDv~vt~~G~enlt~-vprtvee 473 (492)
T KOG2737|consen 416 FIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDDVVVTKSGIENLTC-VPRTVEE 473 (492)
T ss_pred HHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeeccEEEeccccccccC-CCCCHHH
Confidence 63220 0011110000 0 01378899999999999999999998 4665544
No 34
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.92 E-value=1.8e-24 Score=220.64 Aligned_cols=238 Identities=18% Similarity=0.297 Sum_probs=194.1
Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHH-----HHhccCC--CCHHHHHHHHHHHHHHc----CCCCCCCCCCcCCce
Q 017489 107 LQHVVEIKTPDQIERMRETCRIAREVLDAA-----ARMIRPG--VTTDEIDRVVHEATITA----GGYPSPLNYHFFPKS 175 (370)
Q Consensus 107 ~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~-----~~~i~pG--vTe~Ei~~~v~~~~~~~----g~~ps~l~~~~fp~~ 175 (370)
+..+.+||++.||+.+|+|++++..+|... ..++..| +|..-|...+..++.+. |..|..+. +.||++
T Consensus 131 ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d-~cY~PI 209 (960)
T KOG1189|consen 131 LSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLD-MCYPPI 209 (960)
T ss_pred hhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccc-cccChh
Confidence 466789999999999999999999999843 3445555 67777777777777653 44454343 349999
Q ss_pred eeeCCC-CccccCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Q 017489 176 CCTSVN-EVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFRE 254 (370)
Q Consensus 176 v~ss~n-~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~d 254 (370)
+.+|.+ ..-.....+++.| + +|+..+|++|++||+.++|||+| .|+.++++.|+..+.++.++++.||||+..++
T Consensus 210 iqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~lrpG~ki~d 285 (960)
T KOG1189|consen 210 IQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKLLRPGTKIGD 285 (960)
T ss_pred hhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHhhcCCCchhH
Confidence 999988 4445566778888 4 99999999999999999999999 68999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCceeccc---eeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEe
Q 017489 255 IGEVINRHATMSGFSVVKSY---CGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVT 331 (370)
Q Consensus 255 I~~~i~~~~~~~G~~~~~~~---~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t 331 (370)
||.++.+++++.+.+.+.++ .|.|||++|.|.-.+.. .+++.+|++||||.|.-++..-+. |.
T Consensus 286 VY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~in---aKnd~~lk~gmvFni~lGf~nl~n-----~~------ 351 (960)
T KOG1189|consen 286 VYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVIN---AKNDRVLKKGMVFNISLGFSNLTN-----PE------ 351 (960)
T ss_pred HHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccccc---ccchhhhccCcEEEEeeccccccC-----cc------
Confidence 99999999999998865443 79999999999877664 467799999999999987765221 11
Q ss_pred eCCeeeEEEeEEEEEeCCCe-eecCCCCCCCCC
Q 017489 332 ADGKRSAQFEHTLLVTETGV-EVLTARLPSSPK 363 (370)
Q Consensus 332 ~~g~~~~~~EdtvlVTe~G~-EvLT~~~~~~~~ 363 (370)
..+.+++.+.|||||+++++ ++||...+.-.+
T Consensus 352 ~~~~yaL~l~DTvlv~e~~p~~vLT~~~K~~~d 384 (960)
T KOG1189|consen 352 SKNSYALLLSDTVLVGEDPPAEVLTDSAKAVKD 384 (960)
T ss_pred cccchhhhccceeeecCCCcchhhcccchhhcc
Confidence 13558999999999999997 999987555433
No 35
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.90 E-value=4.3e-23 Score=192.13 Aligned_cols=238 Identities=24% Similarity=0.316 Sum_probs=195.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCC---
Q 017489 114 KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPD--- 190 (370)
Q Consensus 114 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~--- 190 (370)
...+...-+|+|+++.+++-.++.+.|+||||..||.+.++...++.-.+-..-+..+||+.+ |.|.+..|+.|+
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aGi~FPtG~--SlN~cAAHyTpNaGd 157 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAGIGFPTGC--SLNHCAAHYTPNAGD 157 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhccccccccCCCcc--cccchhhhcCCCCCC
Confidence 445667789999999999999999999999999999999886554321111122356799754 789999999995
Q ss_pred CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCc-
Q 017489 191 SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFS- 269 (370)
Q Consensus 191 ~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~- 269 (370)
..+|+.+|++.||+|...+|-..|++.|+.+ ++....|+.++++|...+|+.....++..||+++|+++++.+-++
T Consensus 158 ~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSyEvEi 234 (397)
T KOG2775|consen 158 KTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESYEVEI 234 (397)
T ss_pred ceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhheEEEe
Confidence 5789999999999999999999999999987 457778999999999999999999999999999999999997543
Q ss_pred --------eeccceeeecccc-cccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccc-------------------
Q 017489 270 --------VVKSYCGHGIGEL-FHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDR------------------- 321 (370)
Q Consensus 270 --------~~~~~~GHGIG~~-~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~------------------- 321 (370)
.+++++||+|+.. +|..-.+|... ++....|++|..|+||.+-+.|.....
T Consensus 235 ~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVk-gge~trmee~e~yAIETFgSTGkG~v~ddmecSHymkn~~~~~vpl 313 (397)
T KOG2775|consen 235 NGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVK-GGEQTRMEEGEIYAIETFGSTGKGYVHDDMECSHYMKNFELGHVPL 313 (397)
T ss_pred CCceecceeccccCCCcccceEeecCcccceec-CCcceeecCCeeEEEEeeccCCcceecCCcccchhhhhcccccccc
Confidence 4678999999975 78887777653 577899999999999998887765111
Q ss_pred -----------------------cCCCCc----------------------eEEeeCCeeeEEEeEEEEEeCCCeeecCC
Q 017489 322 -----------------------MWPDGW----------------------TAVTADGKRSAQFEHTLLVTETGVEVLTA 356 (370)
Q Consensus 322 -----------------------~wpd~w----------------------t~~t~~g~~~~~~EdtvlVTe~G~EvLT~ 356 (370)
.|-|.- .++..+|.+.+|||||||..+.|.||+|+
T Consensus 314 rl~~~K~ll~~I~knfgTLaFcrR~lDrlGetKyLmAlk~Lc~~Giv~pyPPLcDi~G~ytAQfEHTIll~pt~KEVvsr 393 (397)
T KOG2775|consen 314 RLQRSKGLLNTIDKNFGTLAFCRRWLDRLGETKYLMALKNLCDMGIVQPYPPLCDIKGSYTAQFEHTILLSPTGKEVVSR 393 (397)
T ss_pred ccHHHHHHHHHHhhccccccccHHHHHHhhhHHHHHHHHhhhhcccccCCCcccccCcceeeeeceeeEecchhcchhcc
Confidence 111110 01456899999999999999999999987
Q ss_pred C
Q 017489 357 R 357 (370)
Q Consensus 357 ~ 357 (370)
.
T Consensus 394 G 394 (397)
T KOG2775|consen 394 G 394 (397)
T ss_pred c
Confidence 5
No 36
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.5e-21 Score=196.83 Aligned_cols=224 Identities=18% Similarity=0.223 Sum_probs=187.3
Q ss_pred cccccccCHHHHHHHHHHHHHHHHHHHHHHHh----ccCC--CCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeee-CC
Q 017489 108 QHVVEIKTPDQIERMRETCRIAREVLDAAARM----IRPG--VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCT-SV 180 (370)
Q Consensus 108 ~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~~----i~pG--vTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~s-s~ 180 (370)
..++++|+++|++.||.|----..|+.+.+.. +..| +||.+++..+++.-.+...+.. ..|+++..+ |.
T Consensus 302 ~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~G~ 377 (606)
T KOG2413|consen 302 SRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSVGP 377 (606)
T ss_pred HHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccCCC
Confidence 44678999999999998765555555554444 4556 8999999999987777666543 359988866 99
Q ss_pred CCccccCCCC---CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHHH
Q 017489 181 NEVICHGIPD---SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKP-GVRFREIG 256 (370)
Q Consensus 181 n~~~~Hg~p~---~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kP-G~~~~dI~ 256 (370)
|.++.|+.|. ++.+.+..+.++|-|+.|.-=.+|++||+.+|+|++++++.|..+....-+..+++-| |+..+.+.
T Consensus 378 NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~lD 457 (606)
T KOG2413|consen 378 NGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVLD 457 (606)
T ss_pred CceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchhH
Confidence 9999999996 4589999999999999997779999999999999999999999999999888887755 88899999
Q ss_pred HHHHHHHHHcCCceeccceeeeccc--ccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCC
Q 017489 257 EVINRHATMSGFSVVKSYCGHGIGE--LFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADG 334 (370)
Q Consensus 257 ~~i~~~~~~~G~~~~~~~~GHGIG~--~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g 334 (370)
..++..+.+.|+..-+. +|||||. .+||+|....+..-.+...|++||++++||+.|. ||
T Consensus 458 ~laR~~LW~~gLDy~Hg-TGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~-----------------dg 519 (606)
T KOG2413|consen 458 ALARSALWKAGLDYGHG-TGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYK-----------------DG 519 (606)
T ss_pred HHHHHHHHhhccccCCC-CCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccc-----------------cC
Confidence 99999999999987544 9999995 5899998776653345678999999999998886 79
Q ss_pred eeeEEEeEEEEEeCCCeee
Q 017489 335 KRSAQFEHTLLVTETGVEV 353 (370)
Q Consensus 335 ~~~~~~EdtvlVTe~G~Ev 353 (370)
.+|+|+|+.++|.+.+..-
T Consensus 520 ~fGIRienv~~vvd~~~~~ 538 (606)
T KOG2413|consen 520 EFGIRIENVVEVVDAGTKH 538 (606)
T ss_pred cceEEEeeEEEEEeccccc
Confidence 9999999999998776444
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.76 E-value=4.3e-17 Score=155.67 Aligned_cols=245 Identities=21% Similarity=0.283 Sum_probs=188.4
Q ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcC--CCCC---CCCCCcCCceeeeCCCCcccc
Q 017489 112 EIKTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAG--GYPS---PLNYHFFPKSCCTSVNEVICH 186 (370)
Q Consensus 112 ~vKs~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g--~~ps---~l~~~~fp~~v~ss~n~~~~H 186 (370)
.|-++.-+..+|-|++|+..+|..+.+.+.||++..||+..-...+.++- .|-. ..-+.+||+ |+|+|+++||
T Consensus 14 tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~h 91 (398)
T KOG2776|consen 14 TIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVCH 91 (398)
T ss_pred ccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceeec
Confidence 56788999999999999999999999999999999999887776665531 1211 112456886 5689999999
Q ss_pred CCCC----CCCCCCCCeeEEEEeeeeCCEEeeeeceEEecC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 017489 187 GIPD----SRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGN-----ADEASRQLVQCTYECLEKAISIVKPGVRFREIGE 257 (370)
Q Consensus 187 g~p~----~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~-----~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~ 257 (370)
+.|- +..|++||+|.||+|++++||.+-++.|++|+. ++....+++.++..|.+++++.+|||.+-..|-+
T Consensus 92 ~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT~ 171 (398)
T KOG2776|consen 92 FSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVTR 171 (398)
T ss_pred cCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhhH
Confidence 9982 578999999999999999999999999999984 4567889999999999999999999999999999
Q ss_pred HHHHHHHHcCCceeccceeeeccccccc-CCCCCCCC-----CCCCCeeecCCcEEEEccccccCCcccccCCCC-ce--
Q 017489 258 VINRHATMSGFSVVKSYCGHGIGELFHC-APNIPHYS-----RNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDG-WT-- 328 (370)
Q Consensus 258 ~i~~~~~~~G~~~~~~~~GHGIG~~~he-~P~i~~~~-----~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~-wt-- 328 (370)
++.+.+.++++..+.+..-|..=..+-. .+.|.... +.-....++.+.|+++.-..+.|....+.-++. -|
T Consensus 172 ~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg~~~~K~~~~~~~t~y 251 (398)
T KOG2776|consen 172 AIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTGEGSPKEGDDRAPTIY 251 (398)
T ss_pred HHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecCCCcccccccccceeE
Confidence 9999999999987766555654443322 12222110 112335777888888887666654422211111 11
Q ss_pred ------------------------------------------------------------EEeeCCeeeEEEeEEEEEeC
Q 017489 329 ------------------------------------------------------------AVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 329 ------------------------------------------------------------~~t~~g~~~~~~EdtvlVTe 348 (370)
....+|...+||+.|||+..
T Consensus 252 ~kd~~~~y~LKlKaSR~~~seI~k~~g~~PF~~rs~~~e~r~rmGl~Ec~~~~ll~p~pVl~~kp~~~vaqfk~TvllmP 331 (398)
T KOG2776|consen 252 YKDESVSYMLKLKASRALLSEIKKKFGVMPFTLRSLEEEFRARLGLVECTNHGLLVPYPVLYEKPGEFVAQFKFTVLLMP 331 (398)
T ss_pred EeccchHHHHHHHHHHHHHHHHHhhcCcccccccchhhHHHhhhhhHHhccCccccccceeecCCcchhhheeeEEEecc
Confidence 14568899999999999999
Q ss_pred CCeeecCCCC
Q 017489 349 TGVEVLTARL 358 (370)
Q Consensus 349 ~G~EvLT~~~ 358 (370)
+|.-.||..+
T Consensus 332 ng~~~l~~~p 341 (398)
T KOG2776|consen 332 NGSLRLTGSP 341 (398)
T ss_pred CCCccccCCC
Confidence 9999998843
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.72 E-value=6e-17 Score=163.14 Aligned_cols=243 Identities=15% Similarity=0.224 Sum_probs=180.0
Q ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHH---hccCC---CCHHHHHHHHHHHHHH----------cCC-CCCCCCC
Q 017489 107 LQHVVEIKTPDQIERMRETCRIAREVLDAAAR---MIRPG---VTTDEIDRVVHEATIT----------AGG-YPSPLNY 169 (370)
Q Consensus 107 ~~~~r~vKs~~EI~~~R~A~~ia~~~l~~~~~---~i~pG---vTe~Ei~~~v~~~~~~----------~g~-~ps~l~~ 169 (370)
+..+..+|+.+||+.+|.+++.....|+.... .+-.| +|...+...+...+-. .|- .-..|.+
T Consensus 164 Lsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~lew 243 (1001)
T COG5406 164 LSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQLEW 243 (1001)
T ss_pred hhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhhhhh
Confidence 35577899999999999999999988874332 22222 3444444444432211 111 1112223
Q ss_pred CcCCceeeeCCC-CccccCCCCCCCCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 017489 170 HFFPKSCCTSVN-EVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKP 248 (370)
Q Consensus 170 ~~fp~~v~ss~n-~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kP 248 (370)
. |.+++.+|.. ...+..+..++.|. ||+|.+.+|.+|+|||+.++|||++ +|+.++++-|+.++.+|...+..|||
T Consensus 244 ~-ytpiiqsg~~~Dl~psa~s~~~~l~-gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i~~~~rp 320 (1001)
T COG5406 244 C-YTPIIQSGGSIDLTPSAFSFPMELT-GDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYILGLVRP 320 (1001)
T ss_pred h-cchhhccCceeecccccccCchhhc-CceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHHHhhcCC
Confidence 3 6678888765 33444555566665 8999999999999999999999999 68999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHcCCceeccc---eeeecccccccCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCC
Q 017489 249 GVRFREIGEVINRHATMSGFSVVKSY---CGHGIGELFHCAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPD 325 (370)
Q Consensus 249 G~~~~dI~~~i~~~~~~~G~~~~~~~---~GHGIG~~~he~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd 325 (370)
|+...+||..+.+++.+.|.....+| .|-+||+.|.+.-.+.. -++.++|+.||+|.|.-++..-.. .-|
T Consensus 321 G~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~n---vkn~r~lq~g~~fnis~gf~nl~~---~~~- 393 (1001)
T COG5406 321 GTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFN---VKNGRVLQAGCIFNISLGFGNLIN---PHP- 393 (1001)
T ss_pred CCCchhHHHHHHHHHHhcCCccCchHhhhhhhhcccccccccccee---ccCCceeccccEEEEeecccccCC---CCc-
Confidence 99999999999999999998866554 79999999988755543 245589999999999886654211 011
Q ss_pred CceEEeeCCeeeEEEeEEEEEeCCCeeecCCCCCCCCCcccc
Q 017489 326 GWTAVTADGKRSAQFEHTLLVTETGVEVLTARLPSSPKVYPW 367 (370)
Q Consensus 326 ~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~~~~~~~~~~~~ 367 (370)
...+.+++-||+-|+-+-+.++|.. |+.-+.+.|
T Consensus 394 -------~Nnyal~l~dt~qi~ls~p~~~t~~-~kaq~~isf 427 (1001)
T COG5406 394 -------KNNYALLLIDTEQISLSNPIVFTDS-PKAQGDISF 427 (1001)
T ss_pred -------ccchhhhhccceEeecCCceecccC-cccccceeE
Confidence 2458899999999998889999986 444444444
No 39
>PLN03144 Carbon catabolite repressor protein 4 homolog; Provisional
Probab=98.69 E-value=8.9e-09 Score=107.60 Aligned_cols=33 Identities=30% Similarity=0.770 Sum_probs=29.3
Q ss_pred CCCCCCCCCCcccChhhhhhhhhhHhHhhhhhc
Q 017489 1 MELKLPREGAAFCTQDCFKASWTSHKSVHLKAK 33 (370)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 33 (370)
+|+||+...||||||+|||.+|+.||++|+.+.
T Consensus 81 ~k~~~~~~~s~fCsq~CFk~~w~~Hk~~h~~~~ 113 (606)
T PLN03144 81 VKAKLPVSKSYHCSPKCFSDAWRHHRVLHERAA 113 (606)
T ss_pred hhcCCCcCcceeeCHHHHHHHHHHHHHHHHHhh
Confidence 589997667999999999999999999998543
No 40
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.58 E-value=0.00047 Score=69.39 Aligned_cols=117 Identities=18% Similarity=0.220 Sum_probs=83.3
Q ss_pred CEEeeeeceEEecCCC--HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCce-eccceeee--cccccc
Q 017489 210 GVHGDLNETYFVGNAD--EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV-VKSYCGHG--IGELFH 284 (370)
Q Consensus 210 GY~~D~~RT~~vG~~~--~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~GHG--IG~~~h 284 (370)
..++++.++..|..+. +.++++.+.+.++++++++++|||++-.||..++.+.+.++|... ..++.+.. +....
T Consensus 126 ~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~- 204 (396)
T PLN03158 126 EPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSV- 204 (396)
T ss_pred ccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeecc-
Confidence 3467778888887655 567888899999999999999999999999999999988877432 22221111 11111
Q ss_pred cCCCCCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 285 CAPNIPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 285 e~P~i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
...+.|+. .+..+|++|+++.|+.+.+. +| +.+-+..|++|.+
T Consensus 205 -N~~i~Hgi--p~~r~L~~GDiV~iDvg~~~-----------------~G-Y~aD~tRT~~VG~ 247 (396)
T PLN03158 205 -NEVICHGI--PDARKLEDGDIVNVDVTVYY-----------------KG-CHGDLNETFFVGN 247 (396)
T ss_pred -cccccCCC--CCCccCCCCCEEEEEEeEEE-----------------CC-EEEeEEeEEEcCC
Confidence 12345542 24568999999999997665 45 4558999999964
No 41
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.55 E-value=0.00069 Score=63.06 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceec-cceeeecccccccCCCCCCCCCCCCCeeecCC
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVK-SYCGHGIGELFHCAPNIPHYSRNKAVGVMKVG 304 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~-~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~G 304 (370)
+.++++.+.+.++++++++.++||++-.||..++.+.+.++|..... .+.++...........++|+. .++.+|++|
T Consensus 2 ~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~--~~~~~l~~G 79 (238)
T cd01086 2 EGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGI--PDDRVLKDG 79 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCC--CCCcccCCC
Confidence 45789999999999999999999999999999999999999975211 111110000000011234432 235789999
Q ss_pred cEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 305 QTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 305 mvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
+++.++.+... +| +.+.+..|+.|.+
T Consensus 80 d~v~id~g~~~-----------------~G-Y~ad~~RT~~~G~ 105 (238)
T cd01086 80 DIVNIDVGVEL-----------------DG-YHGDSARTFIVGE 105 (238)
T ss_pred CEEEEEEEEEE-----------------CC-EEEEEEEEEECCC
Confidence 99999997654 34 4569999999964
No 42
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.52 E-value=0.0016 Score=58.13 Aligned_cols=102 Identities=25% Similarity=0.291 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCe
Q 017489 120 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDI 199 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDi 199 (370)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.+.|.........+ ..+.....+...-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~G--h~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTG--HGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCc--cccCcccCCCCCcCCCCCCCcCCCCE
Confidence 5778899999999999999999999999999999999999986421111111 11211111111111124678999999
Q ss_pred eEEEEeeeeC-CEEeeeeceEEecC
Q 017489 200 VNIDVTVYYK-GVHGDLNETYFVGN 223 (370)
Q Consensus 200 V~iDvg~~~~-GY~~D~~RT~~vG~ 223 (370)
+.++.+.+.. ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999987 58888999999863
No 43
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.26 E-value=0.004 Score=56.33 Aligned_cols=101 Identities=22% Similarity=0.302 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCe
Q 017489 120 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDI 199 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDi 199 (370)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+......++ .+.....+...-...++++|++|.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh--~iG~~~~e~p~i~~~~~~~l~~gmv 180 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH--GVGLEVHEAPYISPGSDDVLEEGMV 180 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc--ccCcccCcCCCcCCCCCCCcCCCCE
Confidence 36678889999999999999999999999999999999999864321111111 1111111110001124688999999
Q ss_pred eEEEEeeeeCCE-EeeeeceEEec
Q 017489 200 VNIDVTVYYKGV-HGDLNETYFVG 222 (370)
Q Consensus 200 V~iDvg~~~~GY-~~D~~RT~~vG 222 (370)
+.|+.+.+..|+ -.-+..|++|.
T Consensus 181 ~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 181 FTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEECCeEEecCCCEEEeeeEEEEC
Confidence 999999887544 34467788874
No 44
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.23 E-value=0.0024 Score=61.80 Aligned_cols=98 Identities=21% Similarity=0.247 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCC-CCCeeecCC
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRN-KAVGVMKVG 304 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~~l~~G 304 (370)
+.++++.+.+.++++++++.++||++..||.+.+++.+.+.|... ++.++... ....+||..+ +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~-----afp~~is~--n~~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGP-----AFPVNLSI--NECAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCC-----CCCceecc--CCEeeCCCCCCCCCcccCCC
Confidence 457889999999999999999999999999999999999998532 22222222 2234555433 355789999
Q ss_pred cEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 305 QTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 305 mvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
+++.|+.+... +| +.+-...|+.+.+
T Consensus 75 DvV~iD~G~~~-----------------dG-Y~sD~arT~~vg~ 100 (291)
T cd01088 75 DVVKLDFGAHV-----------------DG-YIADSAFTVDFDP 100 (291)
T ss_pred CEEEEEEEEEE-----------------CC-EEEEEEEEEecCh
Confidence 99999996654 45 4567778887754
No 45
>PRK05716 methionine aminopeptidase; Validated
Probab=97.16 E-value=0.0049 Score=57.82 Aligned_cols=100 Identities=17% Similarity=0.236 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCc--cccC-C-CCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHG-I-PDSRKLED 196 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~--~~Hg-~-p~~r~L~~ 196 (370)
..|++.+.+.++.+.+.++++||++-.||.+.+++.+.+.|..+. .++.++. +.....+. +.++ . .++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 457788888999999999999999999999999999999887542 2233322 22221111 1221 1 24678999
Q ss_pred CCeeEEEEeeee------------------CCEEeeeeceEEecC
Q 017489 197 GDIVNIDVTVYY------------------KGVHGDLNETYFVGN 223 (370)
Q Consensus 197 GDiV~iDvg~~~------------------~GY~~D~~RT~~vG~ 223 (370)
|.++.|+.+++. +++-.-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999988875 345566778888864
No 46
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.08 E-value=0.0035 Score=58.93 Aligned_cols=109 Identities=18% Similarity=0.219 Sum_probs=75.2
Q ss_pred eceEEecCCCH--HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceec-ccee----eecccccccCCC
Q 017489 216 NETYFVGNADE--ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVK-SYCG----HGIGELFHCAPN 288 (370)
Q Consensus 216 ~RT~~vG~~~~--~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~-~~~G----HGIG~~~he~P~ 288 (370)
.|++.|-.+.+ ..+++.+.+.++++++++.++||++-.||...+...+.+.|..... .+.+ -.+|.. ..
T Consensus 5 ~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n----~~ 80 (255)
T PRK12896 5 GRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVN----EE 80 (255)
T ss_pred CCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCC----Ce
Confidence 57887854444 5667888888899999999999999999999999999999875211 0111 111211 12
Q ss_pred CCCCCCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 289 IPHYSRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 289 i~~~~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
++|+. .+..+|++|+++.++.+... +| +.+.+..|+++.+
T Consensus 81 ~~h~~--p~~~~l~~Gd~v~iD~g~~~-----------------~g-Y~aD~~RT~~vG~ 120 (255)
T PRK12896 81 VAHGI--PGPRVIKDGDLVNIDVSAYL-----------------DG-YHGDTGITFAVGP 120 (255)
T ss_pred eEecC--CCCccCCCCCEEEEEEeEEE-----------------Cc-EEEeeEEEEECCC
Confidence 23432 23468999999999987654 23 5677888888753
No 47
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.99 E-value=0.011 Score=55.47 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCc--cccCC--CCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHGI--PDSRKLED 196 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~--~~Hg~--p~~r~L~~ 196 (370)
.+|++..++.++++.+++.++||++-.||.+.+.+.+.+.|..+. ..+.++ .+.....+. +..+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 357778888999999999999999999999999999999886542 122222 222222221 12111 23688999
Q ss_pred CCeeEEEEeeee------------------CCEEeeeeceEEecC
Q 017489 197 GDIVNIDVTVYY------------------KGVHGDLNETYFVGN 223 (370)
Q Consensus 197 GDiV~iDvg~~~------------------~GY~~D~~RT~~vG~ 223 (370)
|.++.|+.+++. +++-.-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999998876 235556777888853
No 48
>PRK15173 peptidase; Provisional
Probab=96.89 E-value=0.012 Score=57.68 Aligned_cols=102 Identities=11% Similarity=0.106 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCee
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIV 200 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV 200 (370)
..|++.+++.++.+.++++++||++-.||.+.+.+.+.+.|.......+.+.......+.++.-.-...++.+|++|.++
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GMV~ 282 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVL 282 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCCEE
Confidence 45788889999999999999999999999999999999988532211111111111113332211111246789999999
Q ss_pred EEEEeeeeCCE-EeeeeceEEec
Q 017489 201 NIDVTVYYKGV-HGDLNETYFVG 222 (370)
Q Consensus 201 ~iDvg~~~~GY-~~D~~RT~~vG 222 (370)
.|..+.+..|. -.-+..|++|.
T Consensus 283 tiEPgiy~~g~ggvriEDtvlVT 305 (323)
T PRK15173 283 SLETPYYGYNLGSIMIEDMILIN 305 (323)
T ss_pred EECCEEEcCCCcEEEEeeEEEEc
Confidence 99999885433 35678899985
No 49
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.78 E-value=0.013 Score=55.20 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCc--cccCC-C-CCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHGI-P-DSRKLED 196 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~--~~Hg~-p-~~r~L~~ 196 (370)
..|++.+++.++++.++++++||++..|+++.+.+.+.+.|.... .++.++ .+..+..+. +.+.. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GH--giGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGH--GIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEEC--ccCCcccCCCccCCCCCCCCCCCcCC
Confidence 356777889999999999999999999999999999999886432 222222 222222221 22222 2 3568999
Q ss_pred CCeeEEEEeeee-----------------CC-EEeeeeceEEecC
Q 017489 197 GDIVNIDVTVYY-----------------KG-VHGDLNETYFVGN 223 (370)
Q Consensus 197 GDiV~iDvg~~~-----------------~G-Y~~D~~RT~~vG~ 223 (370)
|.++.+.-+.+. +| +-.-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 999999999872 34 5667888888853
No 50
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.77 E-value=0.021 Score=53.17 Aligned_cols=101 Identities=12% Similarity=0.071 Sum_probs=69.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCcccc---C--CCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICH---G--IPDSRKLE 195 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~H---g--~p~~r~L~ 195 (370)
..|++..++.++++.++++++||++-.||++.+.+.+.++|...... ..+...+....++.-.+ . .-++++|+
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~~~~~g~~~~~~~~~~Le 187 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYYGREAGLELREDIDTVLE 187 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccCCCccccccCCCCCCccC
Confidence 36788889999999999999999999999999999999988543211 11111222222222111 0 11358899
Q ss_pred CCCeeEEEEeeeeC----CE-EeeeeceEEecC
Q 017489 196 DGDIVNIDVTVYYK----GV-HGDLNETYFVGN 223 (370)
Q Consensus 196 ~GDiV~iDvg~~~~----GY-~~D~~RT~~vG~ 223 (370)
+|.++.++-+.++. |. -.-+..|++|.+
T Consensus 188 ~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 188 PGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 99999999999863 22 233788888863
No 51
>PRK14575 putative peptidase; Provisional
Probab=96.75 E-value=0.016 Score=58.61 Aligned_cols=101 Identities=11% Similarity=0.130 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceee--eCCCCccccCCCCCCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~--ss~n~~~~Hg~p~~r~L~~GD 198 (370)
..|++.+++.++.+.++++++||++-.||++.+.+.+.+.|.......+ +...+. .|..+.-.-..-++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccCCCCCCCCCCCcCCCC
Confidence 4577888899999999999999999999999999999888753221111 112222 232221110112457899999
Q ss_pred eeEEEEeeeeCCE-EeeeeceEEecC
Q 017489 199 IVNIDVTVYYKGV-HGDLNETYFVGN 223 (370)
Q Consensus 199 iV~iDvg~~~~GY-~~D~~RT~~vG~ 223 (370)
++.+..+.+..|. -.-+..|++|.+
T Consensus 364 v~tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 364 VLSLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EEEECCeeecCCCcEEEEEeEEEEcC
Confidence 9999999986543 356889999953
No 52
>PRK09795 aminopeptidase; Provisional
Probab=96.67 E-value=0.028 Score=55.81 Aligned_cols=105 Identities=18% Similarity=0.192 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCC
Q 017489 116 PDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLE 195 (370)
Q Consensus 116 ~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~ 195 (370)
+++-+.+|++-+++.++.+.+.++++||++-.||++.+.+.+.+.|.........++ .+.....+.-....-++.+|+
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH--giGl~~he~p~i~~~~~~~l~ 313 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH--AIGIEVHEDPRFSPRDTTTLQ 313 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc--cCCccccCCCCcCCCCCCCcC
Confidence 555567889999999999999999999999999999999999988753321111111 121121111111112468899
Q ss_pred CCCeeEEEEeeeeCCE-EeeeeceEEec
Q 017489 196 DGDIVNIDVTVYYKGV-HGDLNETYFVG 222 (370)
Q Consensus 196 ~GDiV~iDvg~~~~GY-~~D~~RT~~vG 222 (370)
+|.++.|+.+++..|. -.-+..|++|.
T Consensus 314 ~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 314 PGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 9999999999987654 34567888885
No 53
>PRK14576 putative endopeptidase; Provisional
Probab=96.64 E-value=0.024 Score=57.35 Aligned_cols=100 Identities=13% Similarity=0.073 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceee--eCCCCccccCCCCCCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~--ss~n~~~~Hg~p~~r~L~~GD 198 (370)
..|++-+++.++.+.++++++||++-.||++.+.+.+.+.|.......+.++ ++. .+..+.-....-++.+|++|.
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GH--giG~~l~~~e~P~i~~~~~~~Le~GM 362 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGH--GDGVFLGLEEVPFVSTQATETFCPGM 362 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCC--CCCCCCCcCcCCCcCCCCCCccCCCC
Confidence 4677888889999999999999999999999999999998863221111222 222 233322111112467899999
Q ss_pred eeEEEEeeeeCC-EEeeeeceEEec
Q 017489 199 IVNIDVTVYYKG-VHGDLNETYFVG 222 (370)
Q Consensus 199 iV~iDvg~~~~G-Y~~D~~RT~~vG 222 (370)
++.++.+.+..| .-.-+..|++|.
T Consensus 363 v~~vEp~~y~~g~ggvriEDtvlVT 387 (405)
T PRK14576 363 VLSLETPYYGIGVGSIMLEDMILIT 387 (405)
T ss_pred EEEECCceeecCCCEEEEeeEEEEC
Confidence 999998777544 234478899985
No 54
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.60 E-value=0.024 Score=54.82 Aligned_cols=87 Identities=20% Similarity=0.238 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCc--cccCCC-CCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHGIP-DSRKLEDG 197 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~--~~Hg~p-~~r~L~~G 197 (370)
.+|++..++.++++.+++.++||++..||++.+.+.+.+.|.... ..+.++ .+.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GH--gIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGH--GVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccC--CcCccccCCCcccCcCCCCCCEeCCC
Confidence 457888899999999999999999999999999999999886431 112222 222222221 122222 34689999
Q ss_pred CeeEEEEeeeeCC
Q 017489 198 DIVNIDVTVYYKG 210 (370)
Q Consensus 198 DiV~iDvg~~~~G 210 (370)
.++.|+-+.+..+
T Consensus 236 MV~~iEP~i~~~~ 248 (291)
T PRK12318 236 MIFTIEPMINVGK 248 (291)
T ss_pred CEEEECCEEEcCC
Confidence 9999998887653
No 55
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.57 E-value=0.023 Score=57.22 Aligned_cols=98 Identities=14% Similarity=0.139 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCcc----ccCCC-CCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVI----CHGIP-DSRKLE 195 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~----~Hg~p-~~r~L~ 195 (370)
.+|++.+++.++.+.++++++||+|-.||++.+.+.+.+.|... ....+++ +..+..... +.-.| ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~--~h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK--DSRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc--CCCceee--eccCcCCCCCCccccccCCCCceec
Confidence 46778889999999999999999999999999999999988653 1222332 211111000 00012 357899
Q ss_pred CCCeeEEEEeeeeCCEEeeeeceEEec
Q 017489 196 DGDIVNIDVTVYYKGVHGDLNETYFVG 222 (370)
Q Consensus 196 ~GDiV~iDvg~~~~GY~~D~~RT~~vG 222 (370)
+|.++.+.-+++..|+-.-+..|++|.
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT 373 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILIT 373 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEEC
Confidence 999999999999887766788899995
No 56
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.52 E-value=0.027 Score=54.42 Aligned_cols=85 Identities=11% Similarity=0.126 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCc--cccC-CC-CCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEV--ICHG-IP-DSRKLED 196 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~--~~Hg-~p-~~r~L~~ 196 (370)
..|++.+++.++++.+++.++||++..||++.+.+.+.++|... ..++.++ .+.....+. +.+. .+ ++.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GH--GIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGH--GVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeee--eCCCccCCCCcCCCcccCCCCCEECC
Confidence 35789999999999999999999999999999999998877532 1122222 122222221 2222 12 3568999
Q ss_pred CCeeEEEEeeee
Q 017489 197 GDIVNIDVTVYY 208 (370)
Q Consensus 197 GDiV~iDvg~~~ 208 (370)
|.++.|.-+++.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999999975
No 57
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.52 E-value=0.024 Score=53.41 Aligned_cols=100 Identities=14% Similarity=0.142 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCce----eeeCCCCccccCCC-CCCCC
Q 017489 120 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKS----CCTSVNEVICHGIP-DSRKL 194 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~----v~ss~n~~~~Hg~p-~~r~L 194 (370)
+..|++.+++.++.++++++++||++-.||.+.+.+.+.+.+..-. ..|++. +.....+....-.+ ++++|
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~----~~~~~~~GHgiGle~hE~~~~l~~~~~~~L 194 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELE----PNFTKNLGFGIGLEFRESSLIINAKNDRKL 194 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHH----HhCcCCcccccCcccccCccccCCCCCCCc
Confidence 3567788899999999999999999999999999998888652111 012222 22222221111112 46889
Q ss_pred CCCCeeEEEEeee-e----------CCEEeeeeceEEecC
Q 017489 195 EDGDIVNIDVTVY-Y----------KGVHGDLNETYFVGN 223 (370)
Q Consensus 195 ~~GDiV~iDvg~~-~----------~GY~~D~~RT~~vG~ 223 (370)
++|.++.|..|.+ + +.|-.-++.|++|.+
T Consensus 195 ~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 195 KKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 9999999999997 3 257778899999964
No 58
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.51 E-value=0.031 Score=52.24 Aligned_cols=103 Identities=18% Similarity=0.206 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC----CC------------CCCCCCcCCceeeeCCCCcc
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGG----YP------------SPLNYHFFPKSCCTSVNEVI 184 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~----~p------------s~l~~~~fp~~v~ss~n~~~ 184 (370)
..|++...+.++++.++++++||++-.||.+.+.+.+.+.+. .+ ..+..+.+...+..+..+..
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~p 183 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDVG 183 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccCc
Confidence 456788889999999999999999999999999888876532 11 01100111112222222221
Q ss_pred cc--CCCCCCCCCCCCeeEEEEeeeeCC-----------EEeeeeceEEecC
Q 017489 185 CH--GIPDSRKLEDGDIVNIDVTVYYKG-----------VHGDLNETYFVGN 223 (370)
Q Consensus 185 ~H--g~p~~r~L~~GDiV~iDvg~~~~G-----------Y~~D~~RT~~vG~ 223 (370)
.. ...++.+|++|.++.+..+.+..+ +-.-+..|++|.+
T Consensus 184 ~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 184 GYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred cccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 11 112468899999999999998764 5666788998853
No 59
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.26 E-value=0.083 Score=51.05 Aligned_cols=95 Identities=26% Similarity=0.286 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCC--------CCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGI--------PDSR 192 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~--------p~~r 192 (370)
..+++.+.+.++++.+++.++||++..||.+.+++.+.+.|..+. .+..++. .|.+ ..|.. .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCC--cccCCCccCccCCCCCc
Confidence 456788888999999999999999999999999999999987653 2222221 1211 12221 2367
Q ss_pred CCCCCCeeEEEEeee-eCCEEeeeeceEEec
Q 017489 193 KLEDGDIVNIDVTVY-YKGVHGDLNETYFVG 222 (370)
Q Consensus 193 ~L~~GDiV~iDvg~~-~~GY~~D~~RT~~vG 222 (370)
+|++|+++.|+..+. -.|+..|-.+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 899999999998766 377777877777664
No 60
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.22 E-value=0.02 Score=54.26 Aligned_cols=87 Identities=22% Similarity=0.226 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCce-ecccee--eecccccccCCCCCCCCCCCCCeeec
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV-VKSYCG--HGIGELFHCAPNIPHYSRNKAVGVMK 302 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~G--HGIG~~~he~P~i~~~~~~~~~~~l~ 302 (370)
+.++++-+.+.++++++.+.++||++..||.+.++++++++|.-. ..++-| -.+.+.+-+ .+.|+..+ +..+|+
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe--~v~HgiP~-d~~vlk 88 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE--VVAHGIPG-DKKVLK 88 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh--eeeecCCC-CCcccC
Confidence 356677777889999999999999999999999999999866432 222222 222222211 23344323 678999
Q ss_pred CCcEEEEcccccc
Q 017489 303 VGQTFTIEPMINA 315 (370)
Q Consensus 303 ~GmvftIEP~i~~ 315 (370)
+|.++.|..++..
T Consensus 89 ~GDiv~IDvg~~~ 101 (255)
T COG0024 89 EGDIVKIDVGAHI 101 (255)
T ss_pred CCCEEEEEEEEEE
Confidence 9999999987765
No 61
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.17 E-value=0.035 Score=55.91 Aligned_cols=104 Identities=18% Similarity=0.196 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceecc--ceeeecccc--cccCCCCCCCCCC--CCCee
Q 017489 227 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKS--YCGHGIGEL--FHCAPNIPHYSRN--KAVGV 300 (370)
Q Consensus 227 ~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~--~~GHGIG~~--~he~P~i~~~~~~--~~~~~ 300 (370)
.++++-+.+.++++++++.++||++..||.+.+.+.+++.+-..... ...+|++.. +--.-.++||..+ ++..+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSvN~~v~H~~P~~~d~~~~ 100 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISVNNCVGHFSPLKSDQDYI 100 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEecCCeeeCCCCCCCCCCcC
Confidence 46677778889999999999999999999999988888765321111 011222210 1112234555432 22478
Q ss_pred ecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 301 MKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 301 l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
|++|.++.|+-+... || +.+-+.+|+.|.+
T Consensus 101 Lk~GDvVkIDlG~~i-----------------dG-Y~aD~arTv~vG~ 130 (389)
T TIGR00495 101 LKEGDVVKIDLGCHI-----------------DG-FIALVAHTFVVGV 130 (389)
T ss_pred cCCCCEEEEEEEEEE-----------------CC-EEEEEEEEEEECC
Confidence 999999999987665 45 5678999999974
No 62
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.13 E-value=0.073 Score=48.14 Aligned_cols=97 Identities=22% Similarity=0.250 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCC
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRH-ATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVG 304 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~-~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~G 304 (370)
+..|++.+.+.++++++++.++||++-.||...+.+. +.+.|........-=+.|.. ..++|+. .+...|++|
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~----~~~~~~~--~~~~~l~~g 74 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPN----TDLPHYT--PTDRRLQEG 74 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCC----CGETTTB--CCSSBESTT
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCc----ceeccee--ccceeeecC
Confidence 4578899999999999999999999999999999998 67778442211111112211 1224442 245789999
Q ss_pred cEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEE
Q 017489 305 QTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLV 346 (370)
Q Consensus 305 mvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlV 346 (370)
+++.|+-.... +.+.+.+..|+++
T Consensus 75 d~v~id~~~~~------------------~gy~~d~~Rt~~~ 98 (207)
T PF00557_consen 75 DIVIIDFGPRY------------------DGYHADIARTFVV 98 (207)
T ss_dssp EEEEEEEEEEE------------------TTEEEEEEEEEES
T ss_pred Ccceeecccee------------------eeeEeeeeeEEEE
Confidence 99999986554 2355677888876
No 63
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.06 E-value=0.07 Score=49.52 Aligned_cols=99 Identities=17% Similarity=0.248 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCC-CCCCcCCceeeeCCCCccccCCCCCCCCCCCC
Q 017489 120 ERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSP-LNYHFFPKSCCTSVNEVICHGIPDSRKLEDGD 198 (370)
Q Consensus 120 ~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~-l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GD 198 (370)
...+++.+.+.++++++++.++||++-.||++.+.+.+.+.|+.+-. +..+.+...+.++.+... -..+|++|.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~~-----~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKAK-----LVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCcc-----chhhccCCc
Confidence 46778888999999999999999999999999999999999953211 000111112222221110 146799999
Q ss_pred eeEEEEeeeeCC-EEeeeeceEEecC
Q 017489 199 IVNIDVTVYYKG-VHGDLNETYFVGN 223 (370)
Q Consensus 199 iV~iDvg~~~~G-Y~~D~~RT~~vG~ 223 (370)
++.+....+..| +-.-+..|++|.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999998755 7788999999963
No 64
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.80 E-value=0.097 Score=50.75 Aligned_cols=98 Identities=17% Similarity=0.213 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCC-CCCeeecCC
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRN-KAVGVMKVG 304 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~~l~~G 304 (370)
+..+++-+.+.++++.+++.++||++..||.+.+++.+.+.|... .| .-.|.. ....+||..+ .++.+|++|
T Consensus 6 ~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~--aF-p~~vs~----n~~~~H~~p~~~d~~~l~~G 78 (295)
T TIGR00501 6 EKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP--AF-PCNISI----NECAAHFTPKAGDKTVFKDG 78 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC--CC-Ccceec----CCEeeCCCCCCCcCccCCCC
Confidence 356788888899999999999999999999999999999988652 11 111111 1122343322 245689999
Q ss_pred cEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeC
Q 017489 305 QTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTE 348 (370)
Q Consensus 305 mvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe 348 (370)
.++.|+.+... +| +.+-+..|+.+.+
T Consensus 79 DvV~iD~G~~~-----------------dG-Y~aD~arT~~vG~ 104 (295)
T TIGR00501 79 DVVKLDLGAHV-----------------DG-YIADTAITVDLGD 104 (295)
T ss_pred CEEEEEEeEEE-----------------CC-EEEEEEEEEEeCc
Confidence 99999986554 45 5677888998864
No 65
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.48 E-value=0.052 Score=52.01 Aligned_cols=86 Identities=21% Similarity=0.256 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCce-eccceee--ecccccccCCCCCCCCCCCCCeeec
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSV-VKSYCGH--GIGELFHCAPNIPHYSRNKAVGVMK 302 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~GH--GIG~~~he~P~i~~~~~~~~~~~l~ 302 (370)
+.+|++-+.++++++.|-.++|||++..||++++.+.+-++|+-. ..+|.|. ++-..+.| .|-|. -.+.+.|+
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE--viCHG--IPD~RpLe 198 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE--VICHG--IPDSRPLE 198 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh--eeecC--CCCcCcCC
Confidence 356777888899999999999999999999999999988887532 1222111 11111111 11111 11447899
Q ss_pred CCcEEEEcccccc
Q 017489 303 VGQTFTIEPMINA 315 (370)
Q Consensus 303 ~GmvftIEP~i~~ 315 (370)
.|..+.|...+|.
T Consensus 199 dGDIvNiDVtvY~ 211 (369)
T KOG2738|consen 199 DGDIVNIDVTVYL 211 (369)
T ss_pred CCCEEeEEEEEEe
Confidence 9999999998887
No 66
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=95.46 E-value=0.15 Score=51.05 Aligned_cols=100 Identities=27% Similarity=0.259 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceee--eCCCCccccCCC-CCCCCCCCC
Q 017489 122 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEVICHGIP-DSRKLEDGD 198 (370)
Q Consensus 122 ~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~--ss~n~~~~Hg~p-~~r~L~~GD 198 (370)
.|+.-.+..++.++++++++||+|-.|+++.+++.+.+.|.-...... ....+. ..+.+.-..-.| ++.+|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h~--~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLHG--TGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccCC--ccccCCCCcccCcCccccCCCCCccccCCc
Confidence 457788899999999999999999999999999999996643221111 111121 111111101112 467899999
Q ss_pred eeEEEEeeee-CCEEeeeeceEEecC
Q 017489 199 IVNIDVTVYY-KGVHGDLNETYFVGN 223 (370)
Q Consensus 199 iV~iDvg~~~-~GY~~D~~RT~~vG~ 223 (370)
++.++.+.++ +.+-.-+..+++|.+
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999885 668888999999965
No 67
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.88 E-value=0.28 Score=50.53 Aligned_cols=98 Identities=19% Similarity=0.262 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc----CCceeccceeeecccccccCCCCCCCCCC-CCCeee
Q 017489 227 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS----GFSVVKSYCGHGIGELFHCAPNIPHYSRN-KAVGVM 301 (370)
Q Consensus 227 ~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~----G~~~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~~l 301 (370)
.++++.+.+..+++.+++.++||++..||...+++.+++. |...-..| .-++++. -..+|+..+ ++..+|
T Consensus 160 ~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aF-Pt~vS~N----~~aaH~tP~~gd~~vL 234 (470)
T PTZ00053 160 DLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAF-PTGCSLN----HCAAHYTPNTGDKTVL 234 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCC-CceeecC----ccccCCCCCCCCCcEe
Confidence 3566777778888888999999999999999887765543 43211111 1123321 123454322 345799
Q ss_pred cCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEe
Q 017489 302 KVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVT 347 (370)
Q Consensus 302 ~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVT 347 (370)
+.|.++.|+-+... +| +.+-...|+.+.
T Consensus 235 k~GDvVkID~G~~v-----------------dG-YiaD~ArTv~vg 262 (470)
T PTZ00053 235 TYDDVCKLDFGTHV-----------------NG-RIIDCAFTVAFN 262 (470)
T ss_pred cCCCeEEEEEeEEE-----------------CC-EEEeEEEEEEeC
Confidence 99999999986654 44 456677888774
No 68
>PRK10879 proline aminopeptidase P II; Provisional
Probab=94.46 E-value=0.49 Score=48.47 Aligned_cols=101 Identities=24% Similarity=0.345 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH----HcCCCCCC-------CCC-CcCCcee----eeCCCCccc
Q 017489 122 MRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI----TAGGYPSP-------LNY-HFFPKSC----CTSVNEVIC 185 (370)
Q Consensus 122 ~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~----~~g~~ps~-------l~~-~~fp~~v----~ss~n~~~~ 185 (370)
.|++.+++.++.++++++++||++-.+|...+.+.+. +.|.-+.. ..+ ..|+..+ ...+.+...
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~ 363 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGV 363 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCC
Confidence 4677788888999999999999999999988775543 34432110 000 0123222 111121111
Q ss_pred cCCCCCCCCCCCCeeEEEEeeeeC----------CEEeeeeceEEec
Q 017489 186 HGIPDSRKLEDGDIVNIDVTVYYK----------GVHGDLNETYFVG 222 (370)
Q Consensus 186 Hg~p~~r~L~~GDiV~iDvg~~~~----------GY~~D~~RT~~vG 222 (370)
....++++|++|-++.|.-+.+.. |+-.-+..|++|.
T Consensus 364 ~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 364 YGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred cCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 111135799999999999999863 4666788899995
No 69
>PF01753 zf-MYND: MYND finger; InterPro: IPR002893 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents MYND-type zinc finger domains. The MYND domain (myeloid, Nervy, and DEAF-1) is present in a large group of proteins that includes RP-8 (PDCD2), Nervy, and predicted proteins from Drosophila, mammals, Caenorhabditis elegans, yeast, and plants [, , ]. The MYND domain consists of a cluster of cysteine and histidine residues, arranged with an invariant spacing to form a potential zinc-binding motif []. Mutating conserved cysteine residues in the DEAF-1 MYND domain does not abolish DNA binding, which suggests that the MYND domain might be involved in protein-protein interactions []. Indeed, the MYND domain of ETO/MTG8 interacts directly with the N-CoR and SMRT co-repressors [, ]. Aberrant recruitment of co-repressor complexes and inappropriate transcriptional repression is believed to be a general mechanism of leukemogenesis caused by the t(8;21) translocations that fuse ETO with the acute myelogenous leukemia 1 (AML1) protein. ETO has been shown to be a co-repressor recruited by the promyelocytic leukemia zinc finger (PLZF) protein []. A divergent MYND domain present in the adenovirus E1A binding protein BS69 was also shown to interact with N-CoR and mediate transcriptional repression []. The current evidence suggests that the MYND motif in mammalian proteins constitutes a protein-protein interaction domain that functions as a co-repressor-recruiting interface. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 3QWW_A 3QWV_A 3TG5_A 3S7F_A 3RIB_B 3TG4_A 3S7J_A 3S7D_A 3S7B_A 3RU0_A ....
Probab=93.45 E-value=0.028 Score=36.95 Aligned_cols=19 Identities=32% Similarity=0.948 Sum_probs=17.0
Q ss_pred CCcccChhhhhhhhhhHhH
Q 017489 9 GAAFCTQDCFKASWTSHKS 27 (370)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~ 27 (370)
..+|||++|.+..|..||.
T Consensus 17 ~~~YCs~~Cq~~~w~~Hk~ 35 (37)
T PF01753_consen 17 SVYYCSEECQRADWPYHKF 35 (37)
T ss_dssp SSEESSHHHHHHHHHHHCC
T ss_pred CEEecCHHHHHHHHHHHhh
Confidence 4689999999999999975
No 70
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=92.10 E-value=2.8 Score=38.86 Aligned_cols=96 Identities=17% Similarity=0.099 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceee--eCCCCc--cccCCCCCCCCCCC
Q 017489 123 RETCRIAREVLDAAARMI-RPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCC--TSVNEV--ICHGIPDSRKLEDG 197 (370)
Q Consensus 123 R~A~~ia~~~l~~~~~~i-~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~--ss~n~~--~~Hg~p~~r~L~~G 197 (370)
|++..++.++...+.+.+ +||++-.+|++.+.+.+.+.|.+-. ...++ .+. ....+. +.+...++++|++|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GH--gIG~~l~~hE~P~i~~~~~~~~~L~~G 189 (224)
T cd01085 114 KRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGH--GVGSFLNVHEGPQSISPAPNNVPLKAG 189 (224)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCC--CCCCCCcCCCCCCcCCcCCCCCCcCCC
Confidence 445555566666776666 5999999999999999888875310 00111 222 112222 11011245789999
Q ss_pred CeeEEEEeeeeC-CEEeeeeceEEec
Q 017489 198 DIVNIDVTVYYK-GVHGDLNETYFVG 222 (370)
Q Consensus 198 DiV~iDvg~~~~-GY~~D~~RT~~vG 222 (370)
.++.|.-+++.. .+-.-+..|++|.
T Consensus 190 mvftiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 190 MILSNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred CEEEECCEeEeCCCeEEEeeEEEEEe
Confidence 999999999964 4556688888885
No 71
>PRK13607 proline dipeptidase; Provisional
Probab=90.94 E-value=2.4 Score=43.49 Aligned_cols=88 Identities=18% Similarity=0.237 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHH----HHcCCCCC-------CCCC--CcCCcee----eeCCCCccc
Q 017489 123 RETCRIAREVLDAAARMIRPGVTTDEIDRVVHEAT----ITAGGYPS-------PLNY--HFFPKSC----CTSVNEVIC 185 (370)
Q Consensus 123 R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~----~~~g~~ps-------~l~~--~~fp~~v----~ss~n~~~~ 185 (370)
++...+..++.++++++++||++-.||+..+++.+ .+.|.... .-++ ..||..+ ...+.++-.
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 46778889999999999999999999998887555 44544321 0001 1133322 222222210
Q ss_pred c----------------CCCCCCCCCCCCeeEEEEeeeeCC
Q 017489 186 H----------------GIPDSRKLEDGDIVNIDVTVYYKG 210 (370)
Q Consensus 186 H----------------g~p~~r~L~~GDiV~iDvg~~~~G 210 (370)
. +.-+.++|++|.++.|.-|+|+.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 351 FMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred cccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0 011357999999999999999865
No 72
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=80.28 E-value=9 Score=38.01 Aligned_cols=105 Identities=22% Similarity=0.278 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHc-------------CCceeccceeeeccc-ccccCCCCCCC
Q 017489 227 ASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMS-------------GFSVVKSYCGHGIGE-LFHCAPNIPHY 292 (370)
Q Consensus 227 ~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~-------------G~~~~~~~~GHGIG~-~~he~P~i~~~ 292 (370)
..+..-+.+..++...++.|+||++..||-....+.+.+. |...... =.|.- -.|-.|..
T Consensus 23 KYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~---Isvnncv~h~sPlk--- 96 (398)
T KOG2776|consen 23 KYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTS---ISVNNCVCHFSPLK--- 96 (398)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccce---ecccceeeccCcCC---
Confidence 3455666778888888999999999999875544443322 2221000 00000 01223332
Q ss_pred CCCCCCeeecCCcEEEEccccccCCcccccCCCCceEEeeCCeeeEEEeEEEEEeCCCeeecCCC
Q 017489 293 SRNKAVGVMKVGQTFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLLVTETGVEVLTAR 357 (370)
Q Consensus 293 ~~~~~~~~l~~GmvftIEP~i~~g~~~~~~wpd~wt~~t~~g~~~~~~EdtvlVTe~G~EvLT~~ 357 (370)
.+.+.+|++|.+.-|.-++.. || +.+-+.||++|++.----+|.+
T Consensus 97 --sd~~~~Lk~GDvVKIdLG~Hi-----------------DG-fiA~vaHT~VV~~~~~~~vtG~ 141 (398)
T KOG2776|consen 97 --SDADYTLKEGDVVKIDLGVHI-----------------DG-FIALVAHTIVVGPAPDTPVTGR 141 (398)
T ss_pred --CCCcccccCCCEEEEEeeeee-----------------cc-ceeeeeeeEEeccCCCCcccCc
Confidence 244689999999999987665 45 4577999999986543344443
No 73
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=79.88 E-value=0.72 Score=44.34 Aligned_cols=21 Identities=43% Similarity=0.797 Sum_probs=18.7
Q ss_pred cccChhhhhhhhhhHhHhhhh
Q 017489 11 AFCTQDCFKASWTSHKSVHLK 31 (370)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~ 31 (370)
.+|+|+|-|-.|-.||++-+.
T Consensus 341 ~YCdqeCQk~hWf~HKK~C~~ 361 (396)
T KOG1710|consen 341 AYCDQECQKFHWFIHKKVCSF 361 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHH
Confidence 379999999999999998863
No 74
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=74.83 E-value=12 Score=40.66 Aligned_cols=99 Identities=16% Similarity=0.203 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCC-----ccccCCCCCCCCC
Q 017489 121 RMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE-----VICHGIPDSRKLE 195 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~-----~~~Hg~p~~r~L~ 195 (370)
.|.++-..--.+-++++.+++||..-.+|-..+...+.+.+-.-. ..|++.+.+|..- .+.-..-++++|+
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~inaKnd~~lk 333 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVINAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccccccchhhhc
Confidence 356676677777788889999999999999999998888764322 2355554444321 1111223569999
Q ss_pred CCCeeEEEEeee-------eCCEEeeeeceEEecC
Q 017489 196 DGDIVNIDVTVY-------YKGVHGDLNETYFVGN 223 (370)
Q Consensus 196 ~GDiV~iDvg~~-------~~GY~~D~~RT~~vG~ 223 (370)
.|++.+|.+|.. -+-|.--++-|+.||+
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 999999999876 2346666889999985
No 75
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=74.52 E-value=22 Score=34.66 Aligned_cols=83 Identities=25% Similarity=0.376 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH----HHHHcCCceeccceeeeccccc-ccCCCCCCCC-CCCCCe
Q 017489 226 EASRQLVQCTYECLEKAISIVKPGVRFREIGEVINR----HATMSGFSVVKSYCGHGIGELF-HCAPNIPHYS-RNKAVG 299 (370)
Q Consensus 226 ~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~----~~~~~G~~~~~~~~GHGIG~~~-he~P~i~~~~-~~~~~~ 299 (370)
.+.++..++-+.+...+.+.+|||++.-||-+.+++ .+.+.|...- .|.-.|..+ |++ .||. +.++..
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG---i~FPtG~SlN~cA---AHyTpNaGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG---IGFPTGCSLNHCA---AHYTPNAGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc---ccCCCcccccchh---hhcCCCCCCce
Confidence 456777777888888899999999999998887765 4555665422 233333221 332 2332 245678
Q ss_pred eecCCcEEEEccccc
Q 017489 300 VMKVGQTFTIEPMIN 314 (370)
Q Consensus 300 ~l~~GmvftIEP~i~ 314 (370)
+|+...|.-|.-+..
T Consensus 160 VLqydDV~KiDfGth 174 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTH 174 (397)
T ss_pred eeeecceEEEecccc
Confidence 999999998887443
No 76
>COG3350 Uncharacterized conserved protein [Function unknown]
Probab=69.40 E-value=1.9 Score=30.67 Aligned_cols=12 Identities=25% Similarity=0.728 Sum_probs=9.6
Q ss_pred CcccChhhhhhh
Q 017489 10 AAFCTQDCFKAS 21 (370)
Q Consensus 10 ~~~~~~~~~~~~ 21 (370)
-|||||.|-..+
T Consensus 28 YYFcse~~~~~F 39 (53)
T COG3350 28 YYFCSEECKEKF 39 (53)
T ss_pred EEEeCHHHHHHH
Confidence 589999996554
No 77
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=67.61 E-value=18 Score=27.67 Aligned_cols=52 Identities=21% Similarity=0.278 Sum_probs=32.6
Q ss_pred ccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCC-ccccCCCCCCCCCCCCeeEE
Q 017489 140 IRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNE-VICHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 140 i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~-~~~Hg~p~~r~L~~GDiV~i 202 (370)
++.|.|-.+++..+|..+.++-.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4668999999999998776642221 1111111 11123445788999999986
No 78
>PF09889 DUF2116: Uncharacterized protein containing a Zn-ribbon (DUF2116); InterPro: IPR019216 This entry contains various hypothetical prokaryotic proteins whose functions are unknown. They contain a conserved zinc ribbon motif in the N-terminal part and a predicted transmembrane segment in the C-terminal part.
Probab=61.51 E-value=5.6 Score=29.14 Aligned_cols=22 Identities=18% Similarity=0.481 Sum_probs=19.4
Q ss_pred CCcccChhhhhhhhhhHhHhhh
Q 017489 9 GAAFCTQDCFKASWTSHKSVHL 30 (370)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~ 30 (370)
+.-|||++|-+..++.+|+..+
T Consensus 16 ~~~fCS~~C~~~~~k~qk~~~~ 37 (59)
T PF09889_consen 16 DESFCSPKCREEYRKRQKRMRK 37 (59)
T ss_pred chhhhCHHHHHHHHHHHHHHHH
Confidence 5679999999999999998775
No 79
>PF06467 zf-FCS: MYM-type Zinc finger with FCS sequence motif; InterPro: IPR010507 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. MYM-type zinc fingers were identified in MYM family proteins []. Human protein Q14202 from SWISSPROT is involved in a chromosomal translocation and may be responsible for X-linked retardation in XQ13.1 []. Q9UBW7 from SWISSPROT is also involved in disease. In myeloproliferative disorders it is fused to FGF receptor 1 []; in atypical myeloproliferative disorders it is rearranged []. Members of the family generally are involved in development. This Zn-finger domain functions as a transcriptional trans-activator of late vaccinia viral genes, and orthologues are also found in all nucleocytoplasmic large DNA viruses, NCLDV. This domain is also found fused to the C termini of recombinases from certain prokaryotic transposons []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding; PDB: 2L8E_A 2DAS_A.
Probab=50.20 E-value=7.8 Score=25.76 Aligned_cols=12 Identities=33% Similarity=0.938 Sum_probs=9.9
Q ss_pred CCcccChhhhhh
Q 017489 9 GAAFCTQDCFKA 20 (370)
Q Consensus 9 ~~~~~~~~~~~~ 20 (370)
.-.|||+.|...
T Consensus 31 ~~~FCS~~C~~~ 42 (43)
T PF06467_consen 31 MKQFCSQSCLSS 42 (43)
T ss_dssp TSCCSSHHHHHH
T ss_pred ccChhCHHHHhh
Confidence 457999999875
No 80
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=47.26 E-value=30 Score=26.75 Aligned_cols=51 Identities=27% Similarity=0.272 Sum_probs=37.8
Q ss_pred CCCCCCCCeeEEEEeeee-CCEEeeee------ceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 017489 191 SRKLEDGDIVNIDVTVYY-KGVHGDLN------ETYFVGNADEASRQLVQCTYECLEKAISIVKPGV 250 (370)
Q Consensus 191 ~r~L~~GDiV~iDvg~~~-~GY~~D~~------RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG~ 250 (370)
.+..++||.|.+++.++. +|-.-|-+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 356789999999999997 88777777 56766741 13346777888888884
No 81
>PF04181 RPAP2_Rtr1: Rtr1/RPAP2 family; InterPro: IPR007308 This entry represents a domain found in PAP2 (RNAP II associated polypeptide) protein and the yeast Rtr1 proteins. Its function is not known however it is thought to be a zinc finger.
Probab=45.91 E-value=9.4 Score=29.34 Aligned_cols=13 Identities=54% Similarity=1.201 Sum_probs=11.0
Q ss_pred CCcccChhhhhhh
Q 017489 9 GAAFCTQDCFKAS 21 (370)
Q Consensus 9 ~~~~~~~~~~~~~ 21 (370)
.+.|||..||+++
T Consensus 58 ~~~fCS~~C~~~s 70 (79)
T PF04181_consen 58 LSKFCSKDCYKAS 70 (79)
T ss_pred hcCcCCHHHHHHH
Confidence 3589999999985
No 82
>PF02069 Metallothio_Pro: Prokaryotic metallothionein; InterPro: IPR000518 Metallothioneins (MT) are small proteins that bind heavy metals, such as zinc, copper, cadmium and nickel. They have a high content of cysteine residues that bind the metal ions through clusters of thiolate bonds [, , ]. An empirical classification into three classes was proposed by Kojima [], with class III MTs including atypical polypeptides composed of gamma-glutamylcysteinyl units. Class I and class II MTs (the proteinaceous sequences) have now been grouped into families of phylogenetically-related and thus alignable sequences. The MT superfamily is subdivided into families, subfamilies, subgroups, and isolated isoforms and alleles. The metallothionein superfamily comprises all polypeptides that resemble equine renal metallothionein in several respects [], e.g., low molecular weight; high metal content; amino acid composition with high Cys and low aromatic residue content; unique sequence with characteristic distribution of cysteines, and spectroscopic manifestations indicative of metal thiolate clusters. A MT family subsumes MTs that share particular sequence-specific features and are thought to be evolutionarily related. Fifteen MT families have been characterised, each family being identified by its number and its taxonomic range. Family 14 consists of prokaryota MTs. Its members are recognised by the sequence pattern K-C-A-C-x(2)-C-L-C.The taxonomic range of the members extends to cyanobacteria. Known characteristics are: 53 to 56 AAs; 9 conserved Cys; one conserved tyrosine residue; one conserved histidine residue; contain other unusual residues. ; GO: 0046872 metal ion binding; PDB: 1JJD_A.
Probab=45.89 E-value=8.1 Score=27.55 Aligned_cols=17 Identities=18% Similarity=0.815 Sum_probs=12.8
Q ss_pred CCCCCCCcccChhhhhh
Q 017489 4 KLPREGAAFCTQDCFKA 20 (370)
Q Consensus 4 ~~~~~~~~~~~~~~~~~ 20 (370)
.|.+++.|||||.|-++
T Consensus 22 Ai~~dGk~YCS~aCA~g 38 (52)
T PF02069_consen 22 AIQKDGKYYCSEACANG 38 (52)
T ss_dssp SEESSS-EESSHHHHHT
T ss_pred hHHhCCEeeecHHHhcc
Confidence 45567899999999876
No 83
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=43.66 E-value=79 Score=33.97 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=46.8
Q ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCC--CC---ccccCCCCCCCCCCCCeeEEEE
Q 017489 130 REVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSV--NE---VICHGIPDSRKLEDGDIVNIDV 204 (370)
Q Consensus 130 ~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~--n~---~~~Hg~p~~r~L~~GDiV~iDv 204 (370)
-..-+.+...++||.+-.+|-..+...+.+.|-.-.| +|-..+.++. .. ..+-..-+.|+||.|++.+|.+
T Consensus 308 ~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g~~fnis~ 383 (1001)
T COG5406 308 YMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAGCIFNISL 383 (1001)
T ss_pred HHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccccEEEEee
Confidence 3344556678999999999999999999888765332 2333332222 11 1111223569999999999988
Q ss_pred e
Q 017489 205 T 205 (370)
Q Consensus 205 g 205 (370)
|
T Consensus 384 g 384 (1001)
T COG5406 384 G 384 (1001)
T ss_pred c
Confidence 5
No 84
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=43.36 E-value=48 Score=21.23 Aligned_cols=34 Identities=21% Similarity=0.458 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHH
Q 017489 125 TCRIAREVLDAAARMIRPGVTTDEIDRVVHEATI 158 (370)
Q Consensus 125 A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~ 158 (370)
.|.+...++..+...++...|+.+|...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4678888999999999999999999999998774
No 85
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=38.73 E-value=1.5e+02 Score=26.90 Aligned_cols=74 Identities=16% Similarity=0.243 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHcCCceeccceeeecccccccCCCCCCCCCCCCCeeecCC
Q 017489 225 DEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATMSGFSVVKSYCGHGIGELFHCAPNIPHYSRNKAVGVMKVG 304 (370)
Q Consensus 225 ~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~~l~~G 304 (370)
+++++..-+.+.+=+.+.+...-|..+..+.-+.+++.+.+..- ..|.-|-+|-. -+|.. +++ +.|
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk~---~~yy~q~~GAi----RYVva--d~g-----ekg 179 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGKG---SRYYSQTEGAI----RYVVA--DNG-----EKG 179 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCCC---CcceeeccCce----EEEEe--cCC-----Cce
Confidence 46777778888888888899999999999999999999887543 34556666632 11211 122 568
Q ss_pred cEEEEccc
Q 017489 305 QTFTIEPM 312 (370)
Q Consensus 305 mvftIEP~ 312 (370)
++|+|||.
T Consensus 180 lTFAVEPI 187 (200)
T PF07305_consen 180 LTFAVEPI 187 (200)
T ss_pred eEEEeeee
Confidence 99999994
No 86
>PF04945 YHS: YHS domain; InterPro: IPR007029 This short presumed domain is about 50 amino acid residues long. It often contains two cysteines that may be functionally important. This domain is found in copper transporting ATPases, some phenol hydroxylases and in a set of uncharacterised membrane proteins including Q9CNI0 from SWISSPROT. This domain is named after three of the most conserved amino acids it contains. The domain may be metal binding, possibly copper ions. This domain is duplicated in some copper transporting ATPases.; PDB: 3U52_B 2INN_A 2INP_B 1T0Q_A 2RDB_A 1T0R_A 2IND_A 1T0S_A 2INC_A 3DHI_A ....
Probab=38.52 E-value=13 Score=25.37 Aligned_cols=12 Identities=25% Similarity=0.656 Sum_probs=9.5
Q ss_pred CcccChhhhhhh
Q 017489 10 AAFCTQDCFKAS 21 (370)
Q Consensus 10 ~~~~~~~~~~~~ 21 (370)
=+|||+.|-+..
T Consensus 25 Y~FCS~~C~~~F 36 (47)
T PF04945_consen 25 YYFCSEGCKEKF 36 (47)
T ss_dssp EEESSHHHHHHH
T ss_pred EEEcCHHHHHHH
Confidence 479999997654
No 87
>PRK01490 tig trigger factor; Provisional
Probab=37.59 E-value=1.7e+02 Score=29.73 Aligned_cols=56 Identities=23% Similarity=0.300 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEEEEeeeeCCEEeee----eceE
Q 017489 144 VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDL----NETY 219 (370)
Q Consensus 144 vTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~----~RT~ 219 (370)
+|+.+|++.+.+....++-+ .+.+++++.||.|.+|+....+|=.-+- ..+|
T Consensus 132 vtde~vd~~i~~l~~~~a~~------------------------~~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~~~ 187 (435)
T PRK01490 132 VTDEDVDEELERLRKQFATL------------------------VPVERPAENGDRVTIDFVGSIDGEEFEGGKAEDFSL 187 (435)
T ss_pred CCHHHHHHHHHHHHHhCCcc------------------------ccccccCCCCCEEEEEEEEEECCEECcCCCCCceEE
Confidence 47778888887766554322 1123668999999999999987744332 3567
Q ss_pred EecC
Q 017489 220 FVGN 223 (370)
Q Consensus 220 ~vG~ 223 (370)
.+|.
T Consensus 188 ~lg~ 191 (435)
T PRK01490 188 ELGS 191 (435)
T ss_pred EEcC
Confidence 7773
No 88
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=37.01 E-value=57 Score=24.91 Aligned_cols=47 Identities=15% Similarity=0.096 Sum_probs=30.1
Q ss_pred ccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEE
Q 017489 140 IRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 140 i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~i 202 (370)
++.|.|-.+++..+|..+.+.-.+. .++ + ......+-.|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~A----------~v~-~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIEA----------VGG-R-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEEE----------EEc-c-----CEEECCCEEecCCCEEEE
Confidence 4568899999999998776542221 111 1 112234678999999987
No 89
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=36.49 E-value=1.9e+02 Score=29.08 Aligned_cols=57 Identities=21% Similarity=0.281 Sum_probs=38.8
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEEEEeeeeCCEEeeee----ceE
Q 017489 144 VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGVHGDLN----ETY 219 (370)
Q Consensus 144 vTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY~~D~~----RT~ 219 (370)
+|+.+|++.+......++.+-. + ++++++.||.|.+|+..+.+|=..+-+ .+|
T Consensus 120 vtde~vd~~i~~l~~~~a~~~~----------~-------------~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~~ 176 (408)
T TIGR00115 120 VTDEDVDEELEKLREQNATLVP----------V-------------ERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFSL 176 (408)
T ss_pred CCHHHHHHHHHHHHHhCCcccc----------c-------------cccccCCCCEEEEEEEEEECCEECcCCCCCCeEE
Confidence 5888888888877766553210 0 235789999999999988777554432 367
Q ss_pred EecC
Q 017489 220 FVGN 223 (370)
Q Consensus 220 ~vG~ 223 (370)
.+|.
T Consensus 177 ~lg~ 180 (408)
T TIGR00115 177 ELGS 180 (408)
T ss_pred EECC
Confidence 7773
No 90
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=33.48 E-value=55 Score=23.42 Aligned_cols=35 Identities=23% Similarity=0.491 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHH---HHh-ccCC-CCHHHHHHHHHH
Q 017489 121 RMRETCRIAREVLDAA---ARM-IRPG-VTTDEIDRVVHE 155 (370)
Q Consensus 121 ~~R~A~~ia~~~l~~~---~~~-i~pG-vTe~Ei~~~v~~ 155 (370)
.+.+|++|+.+++..- .+. ++-| +|+.|+++++.-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 5788999999988653 222 4456 799999988753
No 91
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=30.96 E-value=25 Score=36.52 Aligned_cols=69 Identities=23% Similarity=0.255 Sum_probs=46.8
Q ss_pred CCeeEEEEeeeeCCEEeeeeceEEecC--------CCHHHHH--HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017489 197 GDIVNIDVTVYYKGVHGDLNETYFVGN--------ADEASRQ--LVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 265 (370)
Q Consensus 197 GDiV~iDvg~~~~GY~~D~~RT~~vG~--------~~~~~~~--l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~ 265 (370)
+|.-.+-+++.|.||++|+++-|+.|- .-+.... +-...-+.+-..++.++||..-.++-.+.++++.+
T Consensus 584 nD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~L~q 662 (698)
T KOG2611|consen 584 NDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFLSQ 662 (698)
T ss_pred CCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHHHHH
Confidence 677777799999999999999999881 1122111 11222344556678899998877777776666543
No 92
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=29.81 E-value=1.8e+02 Score=28.86 Aligned_cols=52 Identities=12% Similarity=0.248 Sum_probs=48.0
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC
Q 017489 114 KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPS 165 (370)
Q Consensus 114 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps 165 (370)
-|+.||+.+-++-...+..|......+-|..+..||...++.++.+.-..|.
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 4899999999999999999999999999999999999999999988776664
No 93
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=27.90 E-value=33 Score=26.51 Aligned_cols=35 Identities=29% Similarity=0.332 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCC
Q 017489 128 IAREVLDAAARMIRPGVTTDEIDRVVHEATITAGG 162 (370)
Q Consensus 128 ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~ 162 (370)
|+.++.....+..+.++|+.||..++...+.+.|.
T Consensus 40 i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 40 IASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 33333333333333399999999999999997763
No 94
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=27.69 E-value=2.1e+02 Score=28.63 Aligned_cols=52 Identities=13% Similarity=0.281 Sum_probs=47.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCCC
Q 017489 114 KTPDQIERMRETCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGYPS 165 (370)
Q Consensus 114 Ks~~EI~~~R~A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ps 165 (370)
-|+.||+.+-++-...+..|......+-|..+..||...++.++.+.-..|.
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT 154 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT 154 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 4899999999999999999999999999999999999999999988776664
No 95
>PF02824 TGS: TGS domain; InterPro: IPR004095 The TGS domain is present in a number of enzymes, for example, in threonyl-tRNA synthetase (ThrRS), GTPase, and guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (SpoT) []. The TGS domain is also present at the amino terminus of the uridine kinase from the spirochaete Treponema pallidum (but not any other organism, including the related spirochaete Borrelia burgdorferi). TGS is a small domain that consists of ~50 amino acid residues and is predicted to possess a predominantly beta-sheet structure. There is no direct information on the functions of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role []. ; PDB: 1WXQ_A 1NYR_B 1NYQ_B 2KMM_A 1WWT_A 1TKE_A 1TKG_A 1TJE_A 1QF6_A 1TKY_A ....
Probab=26.30 E-value=61 Score=23.36 Aligned_cols=46 Identities=26% Similarity=0.398 Sum_probs=30.6
Q ss_pred ccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEE
Q 017489 140 IRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 140 i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~i 202 (370)
+..|.|-.|++..++..+.++= +..-+|. .-..-+++|++||.|.|
T Consensus 13 ~~~g~T~~d~A~~I~~~l~~~~--------------~~A~Vng---~~vdl~~~L~~~d~v~i 58 (60)
T PF02824_consen 13 LPEGSTVLDVAYSIHSSLAKRA--------------VAAKVNG---QLVDLDHPLEDGDVVEI 58 (60)
T ss_dssp EETTBBHHHHHHHHSHHHHHCE--------------EEEEETT---EEEETTSBB-SSEEEEE
T ss_pred CCCCCCHHHHHHHHCHHHHhhe--------------eEEEEcC---EECCCCCCcCCCCEEEE
Confidence 5679999999999999887741 2222332 11123578999999876
No 96
>PRK07440 hypothetical protein; Provisional
Probab=26.10 E-value=1.2e+02 Score=22.71 Aligned_cols=32 Identities=19% Similarity=0.275 Sum_probs=22.3
Q ss_pred eeeeCCCCc-cccCCCCCCCCCCCCeeEEEEeee
Q 017489 175 SCCTSVNEV-ICHGIPDSRKLEDGDIVNIDVTVY 207 (370)
Q Consensus 175 ~v~ss~n~~-~~Hg~p~~r~L~~GDiV~iDvg~~ 207 (370)
.+..-.|.. +......+..|++||.|-| +.+.
T Consensus 35 ~vav~~N~~iv~r~~w~~~~L~~gD~IEI-v~~v 67 (70)
T PRK07440 35 LVAVEYNGEILHRQFWEQTQVQPGDRLEI-VTIV 67 (70)
T ss_pred eEEEEECCEEeCHHHcCceecCCCCEEEE-EEEe
Confidence 566777754 4445567889999999887 4443
No 97
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=24.46 E-value=1.8e+02 Score=21.80 Aligned_cols=42 Identities=21% Similarity=0.345 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 017489 224 ADEASRQLVQCTYECLEKAISIVKPGVRFREIGEVINRHATM 265 (370)
Q Consensus 224 ~~~~~~~l~~~~~ea~~~ai~~~kPG~~~~dI~~~i~~~~~~ 265 (370)
.+..++.+++.+.+.+..+++.++.|.+..=+...++...+.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 467999999999999999999999987665555555554443
No 98
>PRK05659 sulfur carrier protein ThiS; Validated
Probab=24.40 E-value=1.5e+02 Score=21.40 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=18.1
Q ss_pred eeeCCCCc-cccCCCCCCCCCCCCeeEE
Q 017489 176 CCTSVNEV-ICHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 176 v~ss~n~~-~~Hg~p~~r~L~~GDiV~i 202 (370)
+..-.|.. +......+.+|++||.|-|
T Consensus 32 vav~vNg~iv~r~~~~~~~l~~gD~vei 59 (66)
T PRK05659 32 VAVEVNGEIVPRSQHASTALREGDVVEI 59 (66)
T ss_pred EEEEECCeEeCHHHcCcccCCCCCEEEE
Confidence 44446643 3344457789999999876
No 99
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=23.73 E-value=1.9e+02 Score=22.05 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=30.0
Q ss_pred ccCCCCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEE
Q 017489 140 IRPGVTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 140 i~pGvTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~i 202 (370)
++.|.|-.|.+..+|..+.+.=.+. ..+ .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~f~~A----------i~~--k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDGFLHA----------IDA--RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhcceee----------EEe--eC---CEEeCCCcEecCCCEEEE
Confidence 4568899999999997775431100 011 11 223345678999999986
No 100
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=23.62 E-value=1.9e+02 Score=23.26 Aligned_cols=68 Identities=15% Similarity=0.105 Sum_probs=48.0
Q ss_pred eeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHHHHHHHHHHHhcCCC-------CcHHHHHHHHHHHHHHcCC
Q 017489 199 IVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCTYECLEKAISIVKPG-------VRFREIGEVINRHATMSGF 268 (370)
Q Consensus 199 iV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~~ea~~~ai~~~kPG-------~~~~dI~~~i~~~~~~~G~ 268 (370)
-..+|+.+.+.+|- .+.+.+.+- -..+..+.++...+.....+..+--| ++-.+..+.|.+.+++.||
T Consensus 22 g~V~DV~veHp~YG-~i~~~L~i~-sr~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~ 96 (98)
T PF02829_consen 22 GRVLDVIVEHPVYG-EITGNLNIS-SRRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGF 96 (98)
T ss_dssp -EEEEEEEEETTTE-EEEEEEEE--SHHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-
T ss_pred CEEEEEEEeCCCCc-EEEEEEecC-CHHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCC
Confidence 34459999999988 999999995 35666777777776666667777666 3557788999999999987
No 101
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.20 E-value=1.3e+02 Score=28.75 Aligned_cols=42 Identities=21% Similarity=0.131 Sum_probs=35.8
Q ss_pred CCCCCCeeEEEEeeeeCCEEeeeeceEEecCCCHHHHHHHHHH
Q 017489 193 KLEDGDIVNIDVTVYYKGVHGDLNETYFVGNADEASRQLVQCT 235 (370)
Q Consensus 193 ~L~~GDiV~iDvg~~~~GY~~D~~RT~~vG~~~~~~~~l~~~~ 235 (370)
-+.+| +|.+|-.++++.-.+|++-|=++|..+++..+-|+.+
T Consensus 201 ~~~~G-Pv~fDPA~y~GDrE~Dlam~elFggfp~efy~gY~sv 242 (286)
T COG3001 201 FGKDG-PVIFDPACYWGDRECDLAMLELFGGFPPEFYDGYQSV 242 (286)
T ss_pred ccCCC-CeeeccccccCCcccceehhhhhcCCcHHHHHhhhcc
Confidence 35678 9999999999999999999999998888887777654
No 102
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=22.86 E-value=1.7e+02 Score=30.08 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=29.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCCCCCcCCceeeeCCCCccccCCCCCCCCCCCCeeEEEEeeeeCCE
Q 017489 144 VTTDEIDRVVHEATITAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDSRKLEDGDIVNIDVTVYYKGV 211 (370)
Q Consensus 144 vTe~Ei~~~v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~~Hg~p~~r~L~~GDiV~iDvg~~~~GY 211 (370)
+|+.||+..+......+..+ .|.++.++.||.|.||+.++.+|=
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 57788888887654443221 122222899999999999988775
No 103
>PRK06488 sulfur carrier protein ThiS; Validated
Probab=22.63 E-value=1.5e+02 Score=21.45 Aligned_cols=28 Identities=25% Similarity=0.268 Sum_probs=19.9
Q ss_pred eeeeCCCCcc-ccCCCCCCCCCCCCeeEE
Q 017489 175 SCCTSVNEVI-CHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 175 ~v~ss~n~~~-~Hg~p~~r~L~~GDiV~i 202 (370)
.+....|..+ +.....+.+|++||.|-|
T Consensus 30 ~vavavN~~iv~~~~~~~~~L~dgD~Iei 58 (65)
T PRK06488 30 WLATAVNGELVHKEARAQFVLHEGDRIEI 58 (65)
T ss_pred eEEEEECCEEcCHHHcCccccCCCCEEEE
Confidence 4566677544 445556789999999876
No 104
>PRK05423 hypothetical protein; Provisional
Probab=21.36 E-value=1.5e+02 Score=23.80 Aligned_cols=26 Identities=27% Similarity=0.627 Sum_probs=21.3
Q ss_pred HHHHHHHhccCCCCHHHHHHHHHHHH
Q 017489 132 VLDAAARMIRPGVTTDEIDRVVHEAT 157 (370)
Q Consensus 132 ~l~~~~~~i~pGvTe~Ei~~~v~~~~ 157 (370)
.|+...+.|+||||..||.+++...-
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr 69 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMK 69 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHH
Confidence 45667788999999999999887543
No 105
>PRK07696 sulfur carrier protein ThiS; Provisional
Probab=20.73 E-value=1.8e+02 Score=21.44 Aligned_cols=41 Identities=20% Similarity=0.076 Sum_probs=26.5
Q ss_pred HHHHHHHcCCCCCCCCCCcCCceeeeCCCCcc-ccCCCCCCCCCCCCeeEE
Q 017489 153 VHEATITAGGYPSPLNYHFFPKSCCTSVNEVI-CHGIPDSRKLEDGDIVNI 202 (370)
Q Consensus 153 v~~~~~~~g~~ps~l~~~~fp~~v~ss~n~~~-~Hg~p~~r~L~~GDiV~i 202 (370)
+.+.+...+..+. .+..-.|..+ +....++..|++||.|-|
T Consensus 19 v~~lL~~l~~~~~---------~vav~vN~~iv~r~~w~~~~L~~gD~iEI 60 (67)
T PRK07696 19 VAELLTHLELDNK---------IVVVERNKDILQKDDHTDTSVFDGDQIEI 60 (67)
T ss_pred HHHHHHHcCCCCC---------eEEEEECCEEeCHHHcCceecCCCCEEEE
Confidence 4444555565432 5667777554 444567788999998876
No 106
>PF14538 Raptor_N: Raptor N-terminal CASPase like domain
Probab=20.34 E-value=2.7e+02 Score=24.25 Aligned_cols=34 Identities=15% Similarity=0.217 Sum_probs=25.5
Q ss_pred CCCcHHHHHHHHHHHHHHcCCc-eeccceeeeccc
Q 017489 248 PGVRFREIGEVINRHATMSGFS-VVKSYCGHGIGE 281 (370)
Q Consensus 248 PG~~~~dI~~~i~~~~~~~G~~-~~~~~~GHGIG~ 281 (370)
..-+..++-+.+...-+..+-+ +.-||.|||+=.
T Consensus 70 ~dpt~e~~~~~~~~~R~~a~~~RvLFHYnGhGvP~ 104 (154)
T PF14538_consen 70 LDPTVEDLKRLCQSLRRNAKDERVLFHYNGHGVPR 104 (154)
T ss_pred cCCCHHHHHHHHHHHHhhCCCceEEEEECCCCCCC
Confidence 4567888888888887777765 566889998753
No 107
>smart00746 TRASH metallochaperone-like domain.
Probab=20.14 E-value=46 Score=19.72 Aligned_cols=12 Identities=25% Similarity=0.739 Sum_probs=9.5
Q ss_pred CcccChhhhhhh
Q 017489 10 AAFCTQDCFKAS 21 (370)
Q Consensus 10 ~~~~~~~~~~~~ 21 (370)
-+|||+.|.-..
T Consensus 24 ~~FCs~~c~~~~ 35 (39)
T smart00746 24 FYFCSSKCLSKF 35 (39)
T ss_pred EEEeCHHHHHHH
Confidence 479999998643
No 108
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=20.13 E-value=2.5e+02 Score=24.61 Aligned_cols=39 Identities=13% Similarity=0.005 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCC
Q 017489 125 TCRIAREVLDAAARMIRPGVTTDEIDRVVHEATITAGGY 163 (370)
Q Consensus 125 A~~ia~~~l~~~~~~i~pGvTe~Ei~~~v~~~~~~~g~~ 163 (370)
+..++.++...+......+++..||..++.+.|.+.|-.
T Consensus 84 ~~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~ 122 (154)
T PRK00464 84 IEAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEV 122 (154)
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCE
Confidence 344556666666555556899999999999999998853
No 109
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=20.07 E-value=69 Score=23.61 Aligned_cols=19 Identities=26% Similarity=0.602 Sum_probs=14.7
Q ss_pred HHHHhccCCCCHHHHHHHH
Q 017489 135 AAARMIRPGVTTDEIDRVV 153 (370)
Q Consensus 135 ~~~~~i~pGvTe~Ei~~~v 153 (370)
..++.|++|||.+||.+++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 4567899999999997665
Done!