BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>017493
MFLHGTTEANLCRLSLILAKRVSRHNHLRFLSLEIMSTGQNGKVETTPSGSNASARLLSD
SHVDGNGLSGNEFYSSRGKNGRNRSRMSKWKVHQSASPSFSNEDFPPLDVNLVSSSKGGH
IDKMKTRIDLGPGQKTDIIVSTQLEDSPLSNYVSQHDDSSPSAPLFNKEMKHAHANASPY
KRNYFKHELDAKKWDSSHRLHNVEPFDICLSRRRNFRMEKENECRQTVDWTREGILRPGM
VLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGK
KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTS
GRLGLHQVCS

High Scoring Gene Products

Symbol, full name Information P value
AT3G14160 protein from Arabidopsis thaliana 2.6e-38

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  017493
        (370 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2087452 - symbol:AT3G14160 species:3702 "Arabi...   410  2.6e-38   1


>TAIR|locus:2087452 [details] [associations]
            symbol:AT3G14160 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0016706 "oxidoreductase activity,
            acting on paired donors, with incorporation or reduction of
            molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
            one atom each of oxygen into both donors" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] InterPro:IPR005123
            PROSITE:PS51471 EMBL:CP002686 GO:GO:0016706 GO:GO:0016702
            Pfam:PF13532 EMBL:AP000600 IPI:IPI00541399 RefSeq:NP_566479.5
            UniGene:At.8249 ProteinModelPortal:Q9LJH2 SMR:Q9LJH2 PRIDE:Q9LJH2
            EnsemblPlants:AT3G14160.1 GeneID:820633 KEGG:ath:AT3G14160
            TAIR:At3g14160 HOGENOM:HOG000122277 InParanoid:Q9LJH2
            PhylomeDB:Q9LJH2 ProtClustDB:CLSN2684917 Genevestigator:Q9LJH2
            Uniprot:Q9LJH2
        Length = 455

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 73/133 (54%), Positives = 100/133 (75%)

Query:   235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
             ++RPGMVLLK+YL+I +Q++IV  C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct:   232 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 291

Query:   295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
             T +YG+ R  DG     IP+EF Q V++++ E+ +L   +SK +   D +P + PDICIV
Sbjct:   292 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 351

Query:   355 NFYNTSGRLGLHQ 367
             NFY+++GRLGLHQ
Sbjct:   352 NFYSSTGRLGLHQ 364


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      370       356   0.00080  117 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  613 (65 KB)
  Total size of DFA:  258 KB (2137 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  29.81u 0.12s 29.93t   Elapsed:  00:00:01
  Total cpu time:  29.81u 0.12s 29.93t   Elapsed:  00:00:01
  Start:  Sat May 11 15:13:08 2013   End:  Sat May 11 15:13:09 2013

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