BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017493
(370 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356495097|ref|XP_003516417.1| PREDICTED: uncharacterized protein LOC100818496 [Glycine max]
Length = 447
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/222 (50%), Positives = 148/222 (66%), Gaps = 9/222 (4%)
Query: 154 SQHDDSSPSAPLFNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLSRR 213
S D+ P F K+ K A N N ++ K D+S +PFDIC S R
Sbjct: 136 SNFDNELPQGSNFWKK-KPASVNRPYNSPNNSNYDAVGNKLDASVGSPMSKPFDICFSGR 194
Query: 214 RNFRM-------EKENECRQTVDW-TREGILRPGMVLLKHYLTIREQILIVRICQELGKG 265
RN + + E C + + + GILRPGMVLLK+Y+T+ EQ+ IV++C+ELG G
Sbjct: 195 RNPALIGATLPGDNEKSCIEMQEEKIKGGILRPGMVLLKNYITLDEQVEIVKVCRELGLG 254
Query: 266 PGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMS 325
PGGFYQPGY +GAKLRL+MMCLG+DW+PQ+ KYGKKR +DG +P IP F QLV R++
Sbjct: 255 PGGFYQPGYANGAKLRLKMMCLGMDWNPQSYKYGKKRVIDGSKPPSIPYHFSQLVIRAIQ 314
Query: 326 EAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
EAH++IK +++V VED LP+++PDICIVNFY +G+LGLHQ
Sbjct: 315 EAHSIIKKENRVFKVEDELPSMTPDICIVNFYTNNGKLGLHQ 356
>gi|449464420|ref|XP_004149927.1| PREDICTED: uncharacterized protein LOC101210053 [Cucumis sativus]
Length = 444
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 125/168 (74%), Gaps = 10/168 (5%)
Query: 205 PFDICLS-----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRIC 259
PFDICL + RN + KE TV R +LRPGMVLLKHY+T REQI IV+ C
Sbjct: 191 PFDICLPGGGNVKHRNIYVVKEG---GTVKDYR--LLRPGMVLLKHYITPREQINIVKTC 245
Query: 260 QELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQL 319
Q LG GPGGFYQPGY DGAKLRLRMMCLGLDWDPQTR+Y KR VDG +P IP +F L
Sbjct: 246 QNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRYENKRVVDGNKPPDIPPQFTFL 305
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
V+R++ +AHA IK + +SNVE+ILP++SPDICI NFY T GRLGLHQ
Sbjct: 306 VKRALKDAHAFIKNNCNISNVEEILPSMSPDICIANFYTTRGRLGLHQ 353
>gi|449510843|ref|XP_004163780.1| PREDICTED: uncharacterized LOC101210053 [Cucumis sativus]
Length = 444
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 108/168 (64%), Positives = 125/168 (74%), Gaps = 10/168 (5%)
Query: 205 PFDICLS-----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRIC 259
PFDICL + RN + KE TV R +LRPGMVLLKHY+T REQI IV+ C
Sbjct: 191 PFDICLPGGGNVKHRNIYVVKEG---GTVKDYR--LLRPGMVLLKHYITPREQINIVKTC 245
Query: 260 QELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQL 319
Q LG GPGGFYQPGY DGAKLRLRMMCLGLDWDPQTR+Y KR VDG +P IP +F L
Sbjct: 246 QNLGIGPGGFYQPGYKDGAKLRLRMMCLGLDWDPQTRRYENKRVVDGNKPPDIPPQFTFL 305
Query: 320 VQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
V+R++ +AHA IK + +SNVE+ILP++SPDICI NFY T GRLGLHQ
Sbjct: 306 VKRALKDAHAFIKNNCNISNVEEILPSMSPDICIANFYTTRGRLGLHQ 353
>gi|359481179|ref|XP_003632586.1| PREDICTED: uncharacterized protein LOC100246527 isoform 2 [Vitis
vinifera]
Length = 482
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 142/208 (68%), Gaps = 4/208 (1%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 160 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 219
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 220 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 279
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 280 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 339
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQVC 369
D LP +SP+ICIVNFY TSGRLGLHQVC
Sbjct: 340 DTLPRMSPNICIVNFYTTSGRLGLHQVC 367
>gi|225439617|ref|XP_002267882.1| PREDICTED: uncharacterized protein LOC100246527 isoform 1 [Vitis
vinifera]
Length = 456
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 140/206 (67%), Gaps = 4/206 (1%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 160 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 219
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 220 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 279
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 280 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 339
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQ 367
D LP +SP+ICIVNFY TSGRLGLHQ
Sbjct: 340 DTLPRMSPNICIVNFYTTSGRLGLHQ 365
>gi|297735575|emb|CBI18069.3| unnamed protein product [Vitis vinifera]
Length = 554
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 140/206 (67%), Gaps = 4/206 (1%)
Query: 166 FNKEMKHAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLS----RRRNFRMEKE 221
F K+ H+ + Y +H++ + L EPFDIC S + + ++
Sbjct: 258 FGKKSTPPHSRKPQRGQPYHRHDVGTGNSECPRGLQKFEPFDICKSGVMHPVKKCLIPEQ 317
Query: 222 NECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLR 281
NE + +++ T + +LRPGMVLLK Y+++ EQI +V+ C++LG GPGGFY+PGY DGAKLR
Sbjct: 318 NEIKHSMEGTTQEVLRPGMVLLKGYISLTEQIKMVKKCRDLGVGPGGFYRPGYQDGAKLR 377
Query: 282 LRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
L+MMCLG++WDPQTRKY K +DG E IP EF LV+R++ ++ +LIK +S +NVE
Sbjct: 378 LQMMCLGMNWDPQTRKYEKWHPLDGSETPDIPHEFSVLVERAIQDSQSLIKKNSGENNVE 437
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQ 367
D LP +SP+ICIVNFY TSGRLGLHQ
Sbjct: 438 DTLPRMSPNICIVNFYTTSGRLGLHQ 463
>gi|357470119|ref|XP_003605344.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
gi|355506399|gb|AES87541.1| Alpha-ketoglutarate-dependent dioxygenase alkB-like protein
[Medicago truncatula]
Length = 437
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 129/188 (68%), Gaps = 21/188 (11%)
Query: 194 WDSSHRLHNVEPFDIC--------------LSRRRNFRMEKENECRQTVDWTREGILRPG 239
+++SHR N FDIC L + ++ +E E + T T + ILRPG
Sbjct: 166 YNNSHRKIN---FDICFRGIRNSGLTGATPLEKNKDSCIEFEMQDGGTNKETNDVILRPG 222
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYG 299
MVLLKH+LT EQ+ IV+ C++LG GPGGFYQPGY DGAK RL+MMCLG+DWDPQTRKYG
Sbjct: 223 MVLLKHHLTHEEQVEIVKKCRDLGLGPGGFYQPGYGDGAKFRLKMMCLGMDWDPQTRKYG 282
Query: 300 KKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNT 359
KR++DG +P IP F +LV RS+ EA LI +S VE ILP+++PDICIVNFY T
Sbjct: 283 YKREIDGSKPPSIPHYFSKLVIRSIQEARNLINQES----VEHILPSITPDICIVNFYLT 338
Query: 360 SGRLGLHQ 367
+GRLGLHQ
Sbjct: 339 NGRLGLHQ 346
>gi|255576587|ref|XP_002529184.1| conserved hypothetical protein [Ricinus communis]
gi|223531362|gb|EEF33198.1| conserved hypothetical protein [Ricinus communis]
Length = 465
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 132/207 (63%), Gaps = 13/207 (6%)
Query: 172 HAHANASPYKRNYFKHELDAKKWDSSHRLHNVEPFDICLSRRRNFRM----------EKE 221
H+ A + ++ K SS +EPFDICL + R F + K
Sbjct: 170 HSGAKDQSLQEHFSKRTEPTGDSGSSENQPVIEPFDICLPKNRPFVVLKSTLFDINRGKR 229
Query: 222 NECRQTVDWTREG-ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKL 280
NE + + ++G IL PGMVLLK +L+I +Q+ IV C+ LG GPGGFYQPGY GAKL
Sbjct: 230 NEIKHASE--KQGKILEPGMVLLKGFLSIDDQVRIVNKCRNLGLGPGGFYQPGYRGGAKL 287
Query: 281 RLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNV 340
RL+MMCLG +WDP T Y + R +DG +IP EF +LV+++M ++ AL + ++K ++
Sbjct: 288 RLKMMCLGRNWDPDTSSYEELRSIDGAAAPIIPDEFCELVKKAMKDSIALSQRNNKATSA 347
Query: 341 EDILPALSPDICIVNFYNTSGRLGLHQ 367
EDILP ++PDIC+VNFY+TSGRLGLHQ
Sbjct: 348 EDILPGMTPDICVVNFYSTSGRLGLHQ 374
>gi|224070999|ref|XP_002303323.1| predicted protein [Populus trichocarpa]
gi|222840755|gb|EEE78302.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 10/175 (5%)
Query: 203 VEPFDICLSRRRNF----------RMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
VEPFDICL + EK N+ R+ D ILR GMVLLK+YL++ +Q
Sbjct: 57 VEPFDICLPKTGTTLKLKPSLLVKNREKRNDVRRAADGVNGRILRSGMVLLKNYLSLHDQ 116
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
I I+++C+++G GPGGFYQP Y DG ++ L+MM LG WDP KY + R VDG + +
Sbjct: 117 IKIIKLCRDIGLGPGGFYQPVYRDGGRMHLKMMSLGRSWDPDRGKYLEHRPVDGAKAPIF 176
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
PS+F LV+R++ ++ ALI+++ K + EDILP LSP+IC+VNFY+ SGRLGLHQ
Sbjct: 177 PSDFHPLVERAIKDSRALIEINCKSTAAEDILPPLSPNICVVNFYSESGRLGLHQ 231
>gi|224140571|ref|XP_002323656.1| predicted protein [Populus trichocarpa]
gi|222868286|gb|EEF05417.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 105/135 (77%), Gaps = 7/135 (5%)
Query: 233 EGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWD 292
+G+LRPGMVLLK Y+++ +QI +V+ C+E+G GPGGFY+PGY +GAKLRL+MMCLGL+WD
Sbjct: 18 QGVLRPGMVLLKRYISLGDQIEMVKTCREIGLGPGGFYRPGYKNGAKLRLQMMCLGLNWD 77
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
P+TRKY + DGC+P IP EF QLV+ ++ +AH L+ D +LP +SPDIC
Sbjct: 78 PETRKYEDRSPADGCKPPCIPREFNQLVETAIQDAHGLLGKDY-------MLPTMSPDIC 130
Query: 353 IVNFYNTSGRLGLHQ 367
IVNFY T+GRLGLHQ
Sbjct: 131 IVNFYTTNGRLGLHQ 145
>gi|226507824|ref|NP_001141140.1| hypothetical protein [Zea mays]
gi|194702846|gb|ACF85507.1| unknown [Zea mays]
gi|413932645|gb|AFW67196.1| hypothetical protein ZEAMMB73_974323 [Zea mays]
Length = 345
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 113/176 (64%), Gaps = 16/176 (9%)
Query: 205 PFDICLSRRR-------------NFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIRE 251
PFDIC+S + R +++ EC + V R LRPGMVLLK ++ +
Sbjct: 82 PFDICMSGNKCAVKLKPSIFETNRERKQRDRECSKDV---RPLQLRPGMVLLKRFIKPND 138
Query: 252 QILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSV 311
Q+ IV++C +LG GPGGFY+PGY +GA L+L MMCLG +WDP + YG +R DG +P
Sbjct: 139 QVKIVKLCSQLGVGPGGFYRPGYRNGALLKLWMMCLGKNWDPDSSSYGDRRLFDGAQPPT 198
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
IP EF++ VQ + +H +K +NV +PA+SPDICIVNFYN+SGRLGLHQ
Sbjct: 199 IPEEFQKFVQDGIQASHEFLKQQKGATNVVQEIPAMSPDICIVNFYNSSGRLGLHQ 254
>gi|225442044|ref|XP_002269640.1| PREDICTED: uncharacterized protein LOC100263508 [Vitis vinifera]
gi|297742962|emb|CBI35829.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 122/203 (60%), Gaps = 19/203 (9%)
Query: 180 YKRNYFKHELDAKKWDSSHRLHNVEPFDIC--------------LSRRRNFRMEKENECR 225
+++N + + S VEPFDIC LS+ R EK E +
Sbjct: 168 FEKNSLSKTIGTGNIELSEHPGVVEPFDICPVKTGTSIVLKAPLLSKNR----EKRRESK 223
Query: 226 QTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM 285
+ + + ++R GMVLLK Y++ +Q+ IV+ CQELG G GGFYQPGY DG KL L+MM
Sbjct: 224 RAEEGLKGDVIRSGMVLLKGYISSSDQVKIVKKCQELGLGSGGFYQPGYRDGGKLNLQMM 283
Query: 286 CLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALI-KMDSKVSNVEDIL 344
CLG +WDP+T KY +R VD +P IP EF LV+ ++ ++ AL+ K + S VE L
Sbjct: 284 CLGKNWDPETGKYEDERPVDNAKPPPIPDEFFHLVKEAIQDSQALLSKEKIEASKVEKEL 343
Query: 345 PALSPDICIVNFYNTSGRLGLHQ 367
P + PDICIVNFY TSGRLGLHQ
Sbjct: 344 PWMIPDICIVNFYTTSGRLGLHQ 366
>gi|334185340|ref|NP_188030.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332641955|gb|AEE75476.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 473
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 114/168 (67%), Gaps = 4/168 (2%)
Query: 205 PFDICLSRR----RNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQ 260
PFDI L ++ + +E E ++ ++RPGMVLLK+YL+I Q++IV C+
Sbjct: 203 PFDIFLKKKVMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKCR 262
Query: 261 ELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLV 320
+LG G GGFYQPG+ DG L L+MMCLG +WD QTR+YG+ R +DG P IP EF QLV
Sbjct: 263 QLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQLV 322
Query: 321 QRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQV 368
++++ E+ +L+ +S + D +P L PDIC+VNFY ++G+LGLHQV
Sbjct: 323 EKAIKESKSLVATNSNETKGGDEIPLLLPDICVVNFYTSTGKLGLHQV 370
>gi|9294639|dbj|BAB02978.1| unnamed protein product [Arabidopsis thaliana]
Length = 330
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Query: 205 PFDICLSRR----RNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQ 260
PFDI L ++ + +E E ++ ++RPGMVLLK+YL+I Q++IV C+
Sbjct: 48 PFDIFLKKKVMRLKPSFLELNREKKKAAKGFSGIVIRPGMVLLKNYLSINNQVMIVNKCR 107
Query: 261 ELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLV 320
+LG G GGFYQPG+ DG L L+MMCLG +WD QTR+YG+ R +DG P IP EF QLV
Sbjct: 108 QLGLGEGGFYQPGFQDGGLLHLKMMCLGKNWDCQTRRYGEIRPIDGSVPPRIPVEFSQLV 167
Query: 321 QRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQVCS 370
++++ E+ +L+ +S + D +P L PDIC+VNFY ++G+LGLHQV +
Sbjct: 168 EKAIKESKSLVATNSNETKGGDEIPLLLPDICVVNFYTSTGKLGLHQVVT 217
>gi|242037635|ref|XP_002466212.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
gi|241920066|gb|EER93210.1| hypothetical protein SORBIDRAFT_01g003600 [Sorghum bicolor]
Length = 381
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 110/175 (62%), Gaps = 15/175 (8%)
Query: 205 PFDICLSR------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
P DIC+S N ++ EC + V + LRPGMVLLK ++ +Q
Sbjct: 119 PLDICMSASTCAVKLKPSILETNREKRRDRECSKDVAPLQ---LRPGMVLLKRFIKPNDQ 175
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
+ IV++C++LG GPGGFY+PGY +GA LRL MMCLG +WDP + YG +R DG +P I
Sbjct: 176 VKIVKLCRQLGVGPGGFYRPGYRNGAMLRLWMMCLGKNWDPNSYSYGDRRPFDGAQPPTI 235
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P EFK+ VQ + ++ +K +N +PA+SPDIC+VNFYN+SGRLGLHQ
Sbjct: 236 PEEFKKFVQDVIQASNEFLKQQKGAANAVQEIPAMSPDICLVNFYNSSGRLGLHQ 290
>gi|449461715|ref|XP_004148587.1| PREDICTED: uncharacterized protein LOC101205291 [Cucumis sativus]
gi|449516744|ref|XP_004165406.1| PREDICTED: uncharacterized protein LOC101224716 [Cucumis sativus]
Length = 502
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 115/175 (65%), Gaps = 9/175 (5%)
Query: 202 NVEPFDICLSRRRNFRM---------EKENECRQTVDWTREGILRPGMVLLKHYLTIREQ 252
+++ FDIC + + EK NE R+ ++ +LRPGMV LK +++R+Q
Sbjct: 237 DLDSFDICPPKTGGVMLNPSLLAMNREKRNEMRRAMEGNNGIVLRPGMVHLKGGISVRDQ 296
Query: 253 ILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVI 312
IV+ C++LG G GGFYQPGY +G KL L+MMCLG +WDP + YG R D +P +
Sbjct: 297 AKIVKKCRDLGIGAGGFYQPGYREGGKLHLKMMCLGKNWDPDSSTYGDIRPFDDTKPPNL 356
Query: 313 PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P EF QLV++++ +++A++ DS + N E +LP + PDICIVNFY+ +GRLGLHQ
Sbjct: 357 PDEFYQLVEKAIKDSYAIMAEDSTIKNPERVLPWMKPDICIVNFYSQNGRLGLHQ 411
>gi|240255344|ref|NP_566479.5| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
gi|9294641|dbj|BAB02980.1| unnamed protein product [Arabidopsis thaliana]
gi|332641958|gb|AEE75479.1| 2-oxoglutarate-dependent dioxygenase family protein [Arabidopsis
thaliana]
Length = 455
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 100/133 (75%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 232 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 291
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 292 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 351
Query: 355 NFYNTSGRLGLHQ 367
NFY+++GRLGLHQ
Sbjct: 352 NFYSSTGRLGLHQ 364
>gi|334187371|ref|NP_001190202.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003008|gb|AED90391.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 442
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 9/179 (5%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 175 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 234
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 235 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 293
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQ
Sbjct: 294 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 351
>gi|7329651|emb|CAB82748.1| putative protein [Arabidopsis thaliana]
Length = 449
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 9/179 (5%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 182 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 241
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 242 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 300
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQ
Sbjct: 301 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 358
>gi|186519239|ref|NP_195798.2| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
gi|332003007|gb|AED90390.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis
thaliana]
Length = 387
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 119/179 (66%), Gaps = 9/179 (5%)
Query: 196 SSHRLHNVEPFDICLS--RRRNFRME----KENECRQTVDWT-REGILRPGMVLLKHYLT 248
S R+ + PFDIC S R + ++ + R+TV+ + + ++RPGMVLLK +LT
Sbjct: 120 SPQRIKDPPPFDICSSVLERNDTSIKDWILADETNRETVEVSNKHKVIRPGMVLLKDFLT 179
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCE 308
Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY K +D
Sbjct: 180 PDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYRKNTDIDSKA 238
Query: 309 PSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQ
Sbjct: 239 PE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 296
>gi|24030229|gb|AAN41292.1| unknown protein [Arabidopsis thaliana]
Length = 313
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 100/133 (75%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 90 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 149
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 150 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 209
Query: 355 NFYNTSGRLGLHQ 367
NFY+++GRLGLHQ
Sbjct: 210 NFYSSTGRLGLHQ 222
>gi|357114937|ref|XP_003559250.1| PREDICTED: uncharacterized protein LOC100841984 [Brachypodium
distachyon]
Length = 391
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 106/166 (63%), Gaps = 6/166 (3%)
Query: 202 NVEPFDICLSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQE 261
NV+P + ++R + E+ N Q LRPGMVLLK++L +QI I+ +C+E
Sbjct: 141 NVKPSLLEINREKRRAKERSNSVAQLQH------LRPGMVLLKNFLKPDDQIEIINLCRE 194
Query: 262 LGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQ 321
+G G GGFY PGY DGAKL LRMMCLG DW+P + YG R DG EP IP +FK+LVQ
Sbjct: 195 VGVGKGGFYTPGYRDGAKLSLRMMCLGKDWNPDSSSYGDVRAFDGAEPPEIPEKFKELVQ 254
Query: 322 RSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
++ +H +K SN LP +SPDICIVNFY + GRLGLHQ
Sbjct: 255 GAIGASHEFLKGRKGTSNPSVELPPMSPDICIVNFYTSRGRLGLHQ 300
>gi|23397329|gb|AAK44006.2|AF370191_1 unknown protein [Arabidopsis thaliana]
Length = 253
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 100/133 (75%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C+ LG G GGFYQPGY D AKL L+MMCLG +WDP+
Sbjct: 30 VIRPGMVLLKNYLSINDQVMIVNKCRRLGLGEGGFYQPGYRDEAKLHLKMMCLGKNWDPE 89
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
T +YG+ R DG IP+EF Q V++++ E+ +L +SK + D +P + PDICIV
Sbjct: 90 TSRYGETRPFDGSTAPRIPAEFNQFVEKAVKESQSLAASNSKQTKGGDEIPFMLPDICIV 149
Query: 355 NFYNTSGRLGLHQ 367
NFY+++GRLGLHQ
Sbjct: 150 NFYSSTGRLGLHQ 162
>gi|297829976|ref|XP_002882870.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
gi|297328710|gb|EFH59129.1| hypothetical protein ARALYDRAFT_478829 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 73/134 (54%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++RPGMVLLK+YL+I +Q++IV C++L G GGFYQPGY D KL L+MMCLG +WDP+
Sbjct: 87 VIRPGMVLLKNYLSINDQVMIVNKCRQLCLGEGGFYQPGYRDETKLHLKMMCLGKNWDPE 146
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIK-MDSKVSNVEDILPALSPDICI 353
T +YG+ R +DG P IP+EF Q V++++ E+ +L +SK + ED +P + PDICI
Sbjct: 147 TSRYGEIRPIDGSTPPKIPAEFNQFVEKAVKESQSLAASSNSKETKGEDGIPFMLPDICI 206
Query: 354 VNFYNTSGRLGLHQ 367
VNFY ++GRLGLHQ
Sbjct: 207 VNFYTSTGRLGLHQ 220
>gi|297806029|ref|XP_002870898.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
gi|297316735|gb|EFH47157.1| hypothetical protein ARALYDRAFT_907969 [Arabidopsis lyrata subsp.
lyrata]
Length = 390
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/180 (47%), Positives = 112/180 (62%), Gaps = 6/180 (3%)
Query: 192 KKWDSSHRLHNVEPFDICLS----RRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYL 247
K D S + PFDIC S ++ + E + +LRPGMVLLK +L
Sbjct: 140 KSRDQSPKRREDPPFDICSSVLDTSINDWALADETNGETVEVSNKHRVLRPGMVLLKGFL 199
Query: 248 TIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGC 307
+ Q+ IV+ C+ELG P GFYQPGY G+KL L+MMCLG +WDPQT KYG+ +D
Sbjct: 200 SHDIQVDIVKTCRELGVKPAGFYQPGYRVGSKLHLQMMCLGRNWDPQT-KYGENTDID-S 257
Query: 308 EPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
+ + IP F LV+ ++ EAHALI +S + E ILP +SPDICIVNFY+ +GRLGLHQ
Sbjct: 258 KAADIPVAFSVLVEEAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSETGRLGLHQ 317
>gi|115456185|ref|NP_001051693.1| Os03g0816500 [Oryza sativa Japonica Group]
gi|28875999|gb|AAO60008.1| unknown protein [Oryza sativa Japonica Group]
gi|113550164|dbj|BAF13607.1| Os03g0816500 [Oryza sativa Japonica Group]
Length = 513
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 108/178 (60%), Gaps = 18/178 (10%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 248 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 304
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 305 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 364
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQ
Sbjct: 365 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQ 422
>gi|147807459|emb|CAN70743.1| hypothetical protein VITISV_010007 [Vitis vinifera]
Length = 209
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/116 (63%), Positives = 93/116 (80%)
Query: 252 QILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSV 311
QI +V+ C++LG GPGGFY+PGY DGAKLRL+MMCLG++WDPQTRKY K +DG E
Sbjct: 3 QIKMVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETPD 62
Query: 312 IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
IP EF LV+R++ ++ +LIK +S +NVED LP +SP+ICIVNFY TSGRLGLHQ
Sbjct: 63 IPHEFSVLVERAIQDSQSLIKKNSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQ 118
>gi|108711753|gb|ABF99548.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
Length = 344
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 109/179 (60%), Gaps = 18/179 (10%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 162
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 163 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 222
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQV 368
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQV
Sbjct: 223 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQV 281
>gi|108711754|gb|ABF99549.1| oxidoreductase, 2OG-Fe oxygenase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|125588388|gb|EAZ29052.1| hypothetical protein OsJ_13105 [Oryza sativa Japonica Group]
Length = 371
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 108/178 (60%), Gaps = 18/178 (10%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 106 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 162
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY DG KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 163 DDQVDIIRRCQKLGIGSGGFYTPGYRDGGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 222
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+LGLHQ
Sbjct: 223 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLGLHQ 280
>gi|218193984|gb|EEC76411.1| hypothetical protein OsI_14065 [Oryza sativa Indica Group]
Length = 369
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 106/178 (59%), Gaps = 18/178 (10%)
Query: 205 PFDICLSR---------------RRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTI 249
PFDIC+ R R R E+E ++ LRPGMVLLK +L
Sbjct: 104 PFDICIKRDDKCSIKLSRSLLEINREKRREREQLSKEAAPLQ---YLRPGMVLLKKFLKH 160
Query: 250 REQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEP 309
+Q+ I+R CQ+LG G GGFY PGY D KL L+MMCLG +WDP +R YG R DG +P
Sbjct: 161 DDQVDIIRRCQKLGIGSGGFYTPGYRDSGKLSLQMMCLGKNWDPNSRSYGDTRPFDGAQP 220
Query: 310 SVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
IP F ++V+ ++ ++ ++ ++ +N + LP LSPDIC+VNFY +SG+L LH+
Sbjct: 221 PSIPEVFSKIVKDAIQASNEFLRQKARPANDVEELPPLSPDICLVNFYTSSGKLALHR 278
>gi|356573293|ref|XP_003554797.1| PREDICTED: alpha-ketoglutarate-dependent dioxygenase AlkB homolog
[Glycine max]
Length = 311
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 108/171 (63%), Gaps = 23/171 (13%)
Query: 206 FDICLSRR------RNFRMEKENECRQTVDWTREGI---LRPGMVLLKHYLTIREQILIV 256
FDIC ++ + K E RQ+ + +R + LRPGMV LK YL++ +Q +IV
Sbjct: 64 FDICPPKQAGSVVLKPPLFLKNREKRQSSN-SRSNVVVSLRPGMVFLKGYLSLSDQEMIV 122
Query: 257 RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEF 316
+ C+ELG G GGFYQPGY + K+ L+MMCLG +WDPQ+ +YG +R DG +P IP EF
Sbjct: 123 KRCRELGVGSGGFYQPGYGEDTKMHLKMMCLGKNWDPQSGQYGDRRPFDGAKPPQIPPEF 182
Query: 317 KQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
V ++ +++AL LP++SPDICIVNFY+ +GRLGLHQ
Sbjct: 183 HSHVHSALKDSNAL-------------LPSISPDICIVNFYSQTGRLGLHQ 220
>gi|227202818|dbj|BAH56882.1| AT5G01780 [Arabidopsis thaliana]
Length = 217
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYG 299
MVLLK +LT Q+ IV+ C+ELG P GFYQPGY+ G+KL L+MMCLG +WDPQT KY
Sbjct: 1 MVLLKDFLTPDIQVDIVKTCRELGVKPTGFYQPGYSVGSKLHLQMMCLGRNWDPQT-KYR 59
Query: 300 KKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNT 359
K +D P IP F LV++++ EAHALI +S + E ILP +SPDICIVNFY+
Sbjct: 60 KNTDIDSKAPE-IPVTFNVLVEKAIREAHALIDRESGTEDAERILPVMSPDICIVNFYSE 118
Query: 360 SGRLGLHQ 367
+GRLGLHQ
Sbjct: 119 TGRLGLHQ 126
>gi|358249036|ref|NP_001239982.1| uncharacterized protein LOC100775999 [Glycine max]
gi|255646130|gb|ACU23551.1| unknown [Glycine max]
Length = 311
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 106/171 (61%), Gaps = 23/171 (13%)
Query: 206 FDICLSRR------RNFRMEKENECRQTVDWTREGI---LRPGMVLLKHYLTIREQILIV 256
FDIC ++ + + K E RQ+ + +R + LRPGMV LK YL++ +Q +IV
Sbjct: 64 FDICPPKQAGSVVLKPPLLLKNREKRQSSN-SRSNVVVSLRPGMVFLKGYLSLSDQEMIV 122
Query: 257 RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEF 316
+ C+ELG G GGFYQ GY + K+ L+MMCL +WDPQ +YG +R DG +P IP EF
Sbjct: 123 KRCRELGVGSGGFYQHGYGEDTKMHLKMMCLEKNWDPQFGQYGDRRPFDGAKPPQIPPEF 182
Query: 317 KQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
V ++ +++AL LP++SPDICIVNFY+ +GRLGLHQ
Sbjct: 183 HSHVHSALKDSNAL-------------LPSISPDICIVNFYSETGRLGLHQ 220
>gi|302838827|ref|XP_002950971.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
gi|300263666|gb|EFJ47865.1| hypothetical protein VOLCADRAFT_101962 [Volvox carteri f.
nagariensis]
Length = 250
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 82/133 (61%), Gaps = 6/133 (4%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG++LLK YLT+ EQI IV +ELG GPGGFY P YN GA+L LRMMC+GL W+P+T
Sbjct: 25 LPPGVILLKGYLTMDEQIRIVLQIRELGVGPGGFYTPSYNTGARLSLRMMCMGLHWEPRT 84
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY R DG P IPS +L R + A A + LP L PDIC+
Sbjct: 85 SKYEATRSSYDGATPPPIPSWLVELCGRCLGAASAAAAAAGGIQ-----LPPLRPDICLA 139
Query: 355 NFYNTSGRLGLHQ 367
NFY SGRLG+HQ
Sbjct: 140 NFYERSGRLGMHQ 152
>gi|168038958|ref|XP_001771966.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676748|gb|EDQ63227.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 253
Score = 128 bits (321), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/146 (47%), Positives = 90/146 (61%), Gaps = 11/146 (7%)
Query: 230 WTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGL 289
W+ + +L PGMVLLK +L+I +Q+ IVR C LG+G GGFYQP + DG +RL+MMCLG
Sbjct: 21 WS-DTVLMPGMVLLKGWLSIDDQVEIVRECSTLGRGYGGFYQPTFADGRHMRLQMMCLGK 79
Query: 290 D-WDPQTRKYGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHAL------IKMDSKVSNVE 341
WD T Y +RQ D P IP +F LV+RS+ A L +K+ K VE
Sbjct: 80 KHWDATTNSYVPRRQNHDNATPPAIPEKFSDLVKRSLQRAQDLALKAGGLKLGRK--QVE 137
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQ 367
LP + P +CIVNFY +G LG+HQ
Sbjct: 138 GELPNMDPTVCIVNFYEQTGALGMHQ 163
>gi|348667603|gb|EGZ07428.1| hypothetical protein PHYSODRAFT_319290 [Phytophthora sojae]
Length = 291
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
T G L PG+V+LK +L+ +EQ +V + +G G GGFY+P Y GAK RL MCLG
Sbjct: 64 TDTGALLPGLVILKGFLSPQEQQELVDDSRRMGMGEGGFYKPTYASGAKCRLHQMCLGRH 123
Query: 291 WDPQTRKYGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
W+ +T KY ++R D +P +K+ QRS+ A ++D +V ++P
Sbjct: 124 WNVKTEKYEQRRSNHDNAPVPPLPESWKKCAQRSLEAAR---EIDPQVMGT---CKHMTP 177
Query: 350 DICIVNFYNTSGRLGLH 366
DIC+VNFY +GR G+H
Sbjct: 178 DICVVNFYKKAGRNGMH 194
>gi|301110256|ref|XP_002904208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096334|gb|EEY54386.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 292
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 231 TREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
T G L PG++++K +LT +EQ +V + +G G GGFY+P Y GAK RL MCLG
Sbjct: 65 TDTGALLPGLLIIKQFLTPQEQQELVDDSRCMGLGEGGFYKPTYASGAKCRLHQMCLGRH 124
Query: 291 WDPQTRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP 349
W+ +T KY +R D +P +K QRS+ A K+D V ++P
Sbjct: 125 WNVKTEKYEDQRSNYDYAPIRTLPDSWKTYAQRSLDAAK---KIDPLVMGS---CKKMTP 178
Query: 350 DICIVNFYNTSGRLGLH 366
DIC+VNFY +GR G+H
Sbjct: 179 DICVVNFYKKAGRNGMH 195
>gi|159477217|ref|XP_001696707.1| hypothetical protein CHLREDRAFT_175411 [Chlamydomonas reinhardtii]
gi|158275036|gb|EDP00815.1| predicted protein [Chlamydomonas reinhardtii]
Length = 218
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
Query: 244 KHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQ 303
+ +L++ EQI IV+ +ELG GPGGFY P Y+ G +L+LRMMCLGL W+P+T KY R+
Sbjct: 142 QGFLSMSEQIKIVQAVRELGLGPGGFYPPSYSGGGRLQLRMMCLGLHWEPRTSKYEATRR 201
Query: 304 VDGC---EPSVIP 313
G +P+ +P
Sbjct: 202 PAGVWWPQPNDLP 214
>gi|285808530|gb|ADC36052.1| hypothetical protein [uncultured bacterium 213]
Length = 205
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG L L+I EQ + C+ L GP Y P G K+ +RM+CLG W+ QT +
Sbjct: 5 PGAFHLAQCLSIDEQRALADRCRALIDGPVPGYVPTVRGGGKMHVRMLCLGRHWNGQTYR 64
Query: 298 YGKKRQVDGCEPS-VIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
Y R +P+ +P E + L +R +EA AL D+CI+N+
Sbjct: 65 YEPVRTDFDAQPAPPLPDELRALARRIAAEAGM----------------ALEADLCILNY 108
Query: 357 YNTSGRLGLHQ 367
Y+ GR+GLHQ
Sbjct: 109 YDNEGRMGLHQ 119
>gi|285808284|gb|ADC35816.1| unknown protein [uncultured bacterium 66]
Length = 210
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG + L YLT+ +Q I C +LG GFY P + + M+CLG W+ +T
Sbjct: 8 LAPGAMHLTRYLTLDDQRAIAGTCLDLGAADAGFYTPIVRGEHPMSVCMLCLGRHWNART 67
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R DG +P+EF + +++ + A + +PD CIV
Sbjct: 68 YAYEAVRTDADGRPAPPLPAEFVAIARQAAAAAGFTV----------------TPDTCIV 111
Query: 355 NFYNTSGRLGLHQ 367
N+Y + R+GLHQ
Sbjct: 112 NWYGAASRMGLHQ 124
>gi|134099909|ref|YP_001105570.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|291008697|ref|ZP_06566670.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
gi|133912532|emb|CAM02645.1| alkylated DNA repair protein [Saccharopolyspora erythraea NRRL
2338]
Length = 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L +Q ++VR C+E GP G +GA + R +CLG W P
Sbjct: 11 LAPGAVHVPDWLDPGQQRMLVRACREWATGPAGMRAARMPNGAVMSARTVCLGWHWYPYR 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA-LSPDICIV 354
Q DG PS L +R++++A+ +D A PD+ ++
Sbjct: 71 YSRTLDDQ-DGSPVKPFPSWLGDLGRRAVADAYG-----------DDFDAADYRPDVALI 118
Query: 355 NFYNTSGRLGLHQ 367
N+Y+ S R+GLHQ
Sbjct: 119 NYYDDSARMGLHQ 131
>gi|365859924|ref|ZP_09399759.1| putative DNA repair protein [Streptomyces sp. W007]
gi|364010661|gb|EHM31566.1| putative DNA repair protein [Streptomyces sp. W007]
Length = 231
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C++ +GP G + +R +CLG W P
Sbjct: 19 VVAPGAVHVPEWLSVERRAELVAACRQWARGPVPLRHTVLPGGGVMSVRTVCLGWHWQPY 78
Query: 295 TRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ E A +PD +
Sbjct: 79 --RYARTADDVNGARVAAFPDWLGDLGRAAVAEAY----------GDEGAAEAFAPDTAL 126
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ + R+G+HQ
Sbjct: 127 INFYDATARMGMHQ 140
>gi|291447008|ref|ZP_06586398.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
gi|291349955|gb|EFE76859.1| alkylated DNA repair protein [Streptomyces roseosporus NRRL 15998]
Length = 219
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 13/134 (9%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C+ +GP F G + +R +CLG W P
Sbjct: 8 VVAPGAVHVPEWLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQPY 67
Query: 295 TRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ E+ +PD +
Sbjct: 68 --RYARTADDVNGARVAAFPEWLGDLGRAAVAEAY----------GDEEAAREFAPDTAL 115
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ + R+G+HQ
Sbjct: 116 INFYDDAARMGMHQ 129
>gi|182436704|ref|YP_001824423.1| DNA repair protein [Streptomyces griseus subsp. griseus NBRC 13350]
gi|326777304|ref|ZP_08236569.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
gi|178465220|dbj|BAG19740.1| putative DNA repair protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326657637|gb|EGE42483.1| putative DNA repair protein [Streptomyces griseus XylebKG-1]
Length = 230
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 13/134 (9%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ + +V C++ GP G + +R +CLG W P
Sbjct: 18 VVAPGAVHVPEWLSVERRAELVAACRQWASGPVPLRHTVLPGGGVMSVRTVCLGWHWQPY 77
Query: 295 TRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+Y + V+G + P L + +++EA+ D + + A +PD +
Sbjct: 78 --RYARTADDVNGARVAAFPEWLGDLGRAAVAEAYG----DGEAAE------AFAPDTAL 125
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ S R+G+HQ
Sbjct: 126 INFYDDSARMGMHQ 139
>gi|348171937|ref|ZP_08878831.1| alkylated DNA repair protein [Saccharopolyspora spinosa NRRL 18395]
Length = 215
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L + +Q +V C+E + P G G + +R +CLG W P
Sbjct: 12 IAPGAVHLPDWLDLDQQRELVVACREWARSPAGMRSARLPSGGVMSVRTVCLGWHWYP-- 69
Query: 296 RKYGKKRQVDGCEPSVI---PSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R VD + S + P L +R++++A+ + PD+
Sbjct: 70 --YRYSRTVDDGDGSAVTPFPDWLGDLGRRALADAYGHSAHGYR------------PDVA 115
Query: 353 IVNFYNTSGRLGLHQ 367
+VNFY+ + R+G+HQ
Sbjct: 116 LVNFYDDTARMGMHQ 130
>gi|403525117|ref|YP_006660004.1| DNA repair protein [Arthrobacter sp. Rue61a]
gi|403227544|gb|AFR26966.1| putative DNA repair protein [Arthrobacter sp. Rue61a]
Length = 244
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT+ +Q IV E +GP G ++ +R +CLG W P
Sbjct: 23 LIAPGAVHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQPY 82
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL----IKMDSKVSNVEDILPALSPD 350
R + V+G P +L ++++ A++ +++D S++ + +PD
Sbjct: 83 -RYTREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQYTPD 141
Query: 351 ICIVNFYNTSGRLGLHQ 367
+VNFYN +G+HQ
Sbjct: 142 AALVNFYNDGAAMGMHQ 158
>gi|294814440|ref|ZP_06773083.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|326442830|ref|ZP_08217564.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|294327039|gb|EFG08682.1| Putative DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 255
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ Q +V C+ +GP G + +R +CLG W P
Sbjct: 48 IAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHWQPY- 106
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G P+ +P + ++ AH S A +PD ++
Sbjct: 107 -RYSRTADDVNGARPAPLPGWLAGWGRAAVLAAHGPDGGGS----------AYAPDTALI 155
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+HQ
Sbjct: 156 NFYDDGARMGMHQ 168
>gi|119963370|ref|YP_945851.1| DNA repair protein [Arthrobacter aurescens TC1]
gi|119950229|gb|ABM09140.1| putative DNA repair protein [Arthrobacter aurescens TC1]
Length = 244
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG + + +LT+ +Q IV E +GP G ++ +R +CLG W P
Sbjct: 23 LIAPGAIHVPGWLTLEQQRWIVARFGEWTQGPVPLRAATLPGGHQMSVRTVCLGWHWQPY 82
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHAL----IKMDSKVSNVEDILPALSPD 350
R + V+G P +L ++++ A++ +++D S++ + +PD
Sbjct: 83 -RYTREATDVNGRPVLDFPDWMVRLGRKALEAAYSPGDEGVELDEVTSSLSGLANQYTPD 141
Query: 351 ICIVNFYNTSGRLGLHQ 367
+VNFYN +G+HQ
Sbjct: 142 AALVNFYNDGAAMGMHQ 158
>gi|254391422|ref|ZP_05006625.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
gi|197705112|gb|EDY50924.1| alkylated DNA repair protein [Streptomyces clavuligerus ATCC 27064]
Length = 224
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ Q +V C+ +GP G + +R +CLG W P
Sbjct: 17 IAPGAVHVPGWLTVERQRRLVDACRGWARGPVPMRHTVLPGGGVMSVRTVCLGWHWQPY- 75
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G P+ +P + ++ AH S A +PD ++
Sbjct: 76 -RYSRTADDVNGARPAPLPGWLAGWGRAAVLAAHGPDGGGS----------AYAPDTALI 124
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+HQ
Sbjct: 125 NFYDDGARMGMHQ 137
>gi|345001463|ref|YP_004804317.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
gi|344317089|gb|AEN11777.1| 2OG-Fe(II) oxygenase [Streptomyces sp. SirexAA-E]
Length = 230
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L Q +V C+E +GP G + +R +CLG W P
Sbjct: 24 VVAPGAVHVPGWLPEERQRELVEACREWARGPVPLRNTVLPGGGVMSVRTVCLGWHWQPY 83
Query: 295 TRKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP--ALSPDI 351
+Y + V+G + P + +++EA+ ED + A +PD
Sbjct: 84 --RYARTADDVNGARVAPFPEWLAAWGRAAVAEAY------------EDAVAAEAYAPDT 129
Query: 352 CIVNFYNTSGRLGLHQ 367
+VNFY+ + R+G+HQ
Sbjct: 130 ALVNFYDGAARMGMHQ 145
>gi|239989995|ref|ZP_04710659.1| putative DNA repair protein [Streptomyces roseosporus NRRL 11379]
Length = 204
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 243 LKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKR 302
+ +L++ + +V C+ +GP F G + +R +CLG W P +Y +
Sbjct: 1 MPEWLSVERRAELVTACRRWARGPVPFRHTVLPSGGVMSVRTVCLGWHWQPY--RYARTA 58
Query: 303 -QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSG 361
V+G + P L + +++EA+ E+ +PD ++NFY+ +
Sbjct: 59 DDVNGARVAAFPEWLGDLGRAAVAEAY----------GDEEAAREFAPDTALINFYDDAA 108
Query: 362 RLGLHQ 367
R+G+HQ
Sbjct: 109 RMGMHQ 114
>gi|411007920|ref|ZP_11384249.1| DNA repair protein [Streptomyces globisporus C-1027]
Length = 198
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 249 IREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQ-VDGC 307
+ ++ +V C++ +GP F G + +R +CLG W P +Y + V+G
Sbjct: 1 MEQRAELVVACRQWARGPVPFRHTLLPGGGVMSVRTVCLGWHWQPY--RYARTADDVNGA 58
Query: 308 EPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
+ P L + +++EA+ ED A +PD ++NFY+ + R+G+HQ
Sbjct: 59 RVAAFPDWLGDLGRAAVAEAY----------GDEDAAQAFAPDTALINFYDDAARMGMHQ 108
>gi|302532894|ref|ZP_07285236.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
gi|302441789|gb|EFL13605.1| alkylated DNA repair protein AlkB [Streptomyces sp. C]
Length = 236
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L R Q ++ C+E + P G G + R +CLGL W P
Sbjct: 31 IAPGAVHLPEWLGPRRQRELLAACREWARPPAGLRTVRTPGGGTMTARQVCLGLHWYP-- 88
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R DG +P+ +L +R+++ A+ S+ DI
Sbjct: 89 --YAYARTAVDGDGAPVKPMPAWLAELGRRAVTAAYGSPPPPSEAY-----------DIA 135
Query: 353 IVNFYNTSGRLGLHQ 367
+VNFY+ R+G+H+
Sbjct: 136 LVNFYDGDSRMGMHR 150
>gi|302562052|ref|ZP_07314394.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
gi|302479670|gb|EFL42763.1| DNA repair protein [Streptomyces griseoflavus Tu4000]
Length = 219
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ ++R C+ + P G G + R +CLG W P
Sbjct: 16 IAPGAVHLPDWLGAEEQRELLRECRGWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 73
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEA-HALIKMDSKVSNVEDILPALSPDI 351
YG R V DG P+ +L +R++++A A D+ DI
Sbjct: 74 --YGYARTVVDGDGAPVKPFPARLGELGRRAVADALGAPAARDAAY------------DI 119
Query: 352 CIVNFYNTSGRLGLHQ 367
+VNFY+ R+G+H+
Sbjct: 120 ALVNFYDADARMGMHR 135
>gi|256831645|ref|YP_003160372.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
gi|256685176|gb|ACV08069.1| 2OG-Fe(II) oxygenase [Jonesia denitrificans DSM 20603]
Length = 231
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LTI +Q + R C + GP G + ++ +C+G W P
Sbjct: 15 IAPGAVWLPGWLTIPQQAWLARQCAQWAAGPVPIRSATVR-GHPMSVKTVCVGWHWRP-- 71
Query: 296 RKYGKKRQ---VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R V+G P +L +R +++A + ED A +PD
Sbjct: 72 --YAYSRDAVDVNGQRVVEFPKWMVRLGRRIVADA----------TGDEDRALAYTPDTA 119
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ R+G+HQ
Sbjct: 120 LINFYDVQARMGMHQ 134
>gi|184201720|ref|YP_001855927.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
gi|183581950|dbj|BAG30421.1| putative alkylated DNA repair protein [Kocuria rhizophila DC2201]
Length = 236
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 220 KENECRQTVDWTREGI-LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQ--PGYND 276
E E + RE I L PG V + +L + Q +V C++ + +Q PG
Sbjct: 2 AEYEVTELFTVPREPIVLAPGAVHVPDWLPVARQHDLVAACRDWVRSAPMRHQVMPG--- 58
Query: 277 GAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKM-DS 335
G ++ ++ + LG++ P +YG G E + +P L R++++A+ ++ D
Sbjct: 59 GGRMSVQSVMLGVNRTPY--RYGAT---GGAEVAALPDWLVDLGARAVADAYGMVDAGDV 113
Query: 336 KVSNVEDILPALSPDICIVNFYNTSGRLGLHQ 367
V VED++ PD +VN+Y+ + +G+HQ
Sbjct: 114 GVPEVEDVVRGFVPDSALVNYYDGAAHMGMHQ 145
>gi|345012835|ref|YP_004815189.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
gi|344039184|gb|AEM84909.1| 2OG-Fe(II) oxygenase [Streptomyces violaceusniger Tu 4113]
Length = 230
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPGWLTLEQQRELVIACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++++A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPHWMVELGRRALADAY----------DDETAGEGYAPDTA 117
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ +LG+HQ
Sbjct: 118 LINFYDAQAKLGMHQ 132
>gi|229488753|ref|ZP_04382619.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
gi|229324257|gb|EEN90012.1| alkylated DNA repair protein [Rhodococcus erythropolis SK121]
Length = 221
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q +V C+ P G K+ ++ +CLG W P
Sbjct: 15 VAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 73
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 74 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 122
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+HQ
Sbjct: 123 NFYDEGARMGMHQ 135
>gi|453053797|gb|EMF01257.1| DNA repair protein [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 215
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 21/136 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++R C+E + P G +G + +R +CLG W P
Sbjct: 13 VAPGAVHVPGWLDEAAQQRLLRACREWARPPAGLRTVRMPNGGAMSVRTVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-DI 351
YG R V DG P L + +++ A+ P P DI
Sbjct: 71 --YGYARTVVDGDGAPVKPFPHWLGALARDAVARAYG-------------TPPGPEPYDI 115
Query: 352 CIVNFYNTSGRLGLHQ 367
+VNFY+ R+GLH+
Sbjct: 116 ALVNFYDAGARMGLHR 131
>gi|357392743|ref|YP_004907584.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
gi|311899220|dbj|BAJ31628.1| putative alpha-ketoglutarate-dependent dioxygenase AlkB
[Kitasatospora setae KM-6054]
Length = 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 17/135 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LT +Q +V C+ GP G + ++ +CLG W P
Sbjct: 22 IAPGAVHLPGWLTPEQQRSLVTACRGWATGPVPIRHTRLPRGGVMSVQTVCLGWHWKP-- 79
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P L +R++++A+ + + + + E PD
Sbjct: 80 --YAYTRTADDVNGRPVTPFPGWLADLGRRAVADAY---QDEERAAGYE-------PDAA 127
Query: 353 IVNFYNTSGRLGLHQ 367
+VNFY+ RLG+HQ
Sbjct: 128 LVNFYDAEARLGMHQ 142
>gi|297561490|ref|YP_003680464.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296845938|gb|ADH67958.1| 2OG-Fe(II) oxygenase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 236
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 58/146 (39%), Gaps = 26/146 (17%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L EQ +VR C++ +GP G + G + +RM+ LG W P
Sbjct: 15 PGAVHVPGWLGPEEQADLVRRCRDWARGPAGMRRHTMPRGGVMSVRMVSLGWHWSPGPNP 74
Query: 298 YGKKRQV----------------DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVE 341
+ ++R DG P L R++ A+
Sbjct: 75 HAERRGPGPSRHRQAYSYARLLPDGTPVQPFPDLLGDLAARAVEAAYG-------APPGP 127
Query: 342 DILPALSPDICIVNFYNTSGRLGLHQ 367
D P D+ +VNFY+ R+G+HQ
Sbjct: 128 DADPY---DVALVNFYDADARMGMHQ 150
>gi|453069025|ref|ZP_21972294.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
gi|452764474|gb|EME22742.1| alkylated DNA repair protein [Rhodococcus qingshengii BKS 20-40]
Length = 218
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q +V C+ P G K+ ++ +CLG W P
Sbjct: 12 VAPGAILVPDWLSVEQQRFLVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 70
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 71 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+HQ
Sbjct: 120 NFYDEGARMGMHQ 132
>gi|28894458|gb|AAO61205.1| putative DNA repair protein [Streptomyces hygroscopicus]
Length = 226
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPSWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ +A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPDWMVELGRRALVDAY----------DDETAGEGYTPDTA 117
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ +LG+HQ
Sbjct: 118 LINFYDAQAKLGMHQ 132
>gi|376250270|ref|YP_005137151.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
gi|372111774|gb|AEX77833.1| putative DNA repair protein [Corynebacterium diphtheriae HC03]
Length = 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G S IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGMAVSPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 126 RIDAALVNYYPPGAGMGMHQ 145
>gi|409191810|gb|AFV30255.1| 2OG-Fe(II) oxygenase [Streptomyces sp. LZ35]
Length = 226
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ +Q +V C+ GP G + +R +C+G W P
Sbjct: 12 VAPGAVHVPGWLTLEQQRELVLACRGWATGPVPIRHTKLPRGGVMSVRTVCIGWHWQP-- 69
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ +A+ + E +PD
Sbjct: 70 --YAYTRTADDVNGARVAEFPDWMVELGRRALVDAY----------DDETAGEGYTPDTA 117
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ +LG+HQ
Sbjct: 118 LINFYDAQAKLGMHQ 132
>gi|126348301|emb|CAJ90022.1| putative DNA repair protein [Streptomyces ambofaciens ATCC 23877]
Length = 223
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L Q ++R C+E + P G G + R +CLG W P
Sbjct: 13 IAPGAVHLPDWLDPGRQRDLLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R V DG P +L +R++++A D + DI
Sbjct: 71 --YAYARTVVDGDGAPVKPFPDRLGELGRRAVTDALG-----------ADAVAEAPYDIA 117
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ R+G+H+
Sbjct: 118 LINFYDADARMGMHR 132
>gi|386838595|ref|YP_006243653.1| DNA repair protein [Streptomyces hygroscopicus subsp. jinggangensis
5008]
gi|374098896|gb|AEY87780.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451791886|gb|AGF61935.1| putative DNA repair protein [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 216
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 15 PGAVHVVDWLDAERQRALLAACRDWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P L +R++++A D +PA+ DI ++
Sbjct: 71 YAYARTVVDGDGSPVKPFPDWLGALGRRAVADALG-----------PDAVPAVPYDIALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 120 NFYDGDARMGMHR 132
>gi|357402536|ref|YP_004914461.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|386358611|ref|YP_006056857.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
gi|337768945|emb|CCB77658.1| putative DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM
46488]
gi|365809119|gb|AEW97335.1| DNA repair protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 216
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 22/136 (16%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L EQ ++ C+ + P G +G ++ +R +CLG W P
Sbjct: 13 IAPGAVHVPGWLGPDEQRRLLADCRAWARPPAGLRTVTMPNGGRMSVRSVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-DI 351
YG R V DG P+ L +R+++EA+ P P DI
Sbjct: 71 --YGYARTVVDGDGAPVKPFPAPLGDLARRAVTEAYG--------------EPCAEPYDI 114
Query: 352 CIVNFYNTSGRLGLHQ 367
+VNFY +G+H+
Sbjct: 115 ALVNFYGEGAAMGMHR 130
>gi|325672978|ref|ZP_08152672.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
gi|325556231|gb|EGD25899.1| alkylated DNA repair protein [Rhodococcus equi ATCC 33707]
Length = 221
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
G VL+ +L + EQ +V C++ +GP G + ++ +CLG W P +Y
Sbjct: 15 GAVLVPDWLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQPY--RY 72
Query: 299 GK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
+ G +P QL +R++++A+ D + A PD ++NFY
Sbjct: 73 SRIAGDAGGGRVLPVPEWLAQLGRRAVADAY-----DDPAAGA-----AYEPDAALINFY 122
Query: 358 NTSGRLGLHQ 367
+ + R+G+H+
Sbjct: 123 DDAARMGMHR 132
>gi|403512625|ref|YP_006644263.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
gi|402798269|gb|AFR05679.1| 2OG-Fe(II) oxygenase superfamily protein [Nocardiopsis alba ATCC
BAA-2165]
Length = 215
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L L + +I +VR C+E +GP G + G + + M+ LG W R
Sbjct: 15 PGAVHLPGLLPLETRIDLVRRCREWARGPAGMRRHTMPSGGVMSVDMVALGWHW----RP 70
Query: 298 YGKKRQV-DGCEPSVIPSEFKQLVQRSMSEAHA-LIKMDSKVSNVEDILPALSPDICIVN 355
Y R + DG P L RS+ A+ + D+ D+ +VN
Sbjct: 71 YAYSRTLPDGTPVRPFPDLLGALAVRSVEAAYGEPYEGDAH-------------DVALVN 117
Query: 356 FYNTSGRLGLHQ 367
FY+ R+G+HQ
Sbjct: 118 FYDADARMGMHQ 129
>gi|226188009|dbj|BAH36113.1| putative alkylated DNA repair protein [Rhodococcus erythropolis
PR4]
Length = 221
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG +L+ +L++ +Q V C+ P G K+ ++ +CLG W P
Sbjct: 15 VAPGAILVPDWLSVEQQRFWVAECRRWATAPVPMRSAVVPGGHKMSVQTVCLGWHWQPY- 73
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + +P L + +++ A+ D + +PD ++
Sbjct: 74 -KYTRTADDVNGAPVAAVPDWLVDLGRAAVAAAY-----DDPTAGER-----YTPDTALI 122
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+HQ
Sbjct: 123 NFYDEGARMGMHQ 135
>gi|302547250|ref|ZP_07299592.1| putative DNA repair protein [Streptomyces hygroscopicus ATCC 53653]
gi|302464868|gb|EFL27961.1| putative DNA repair protein [Streptomyces himastatinicus ATCC
53653]
Length = 219
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +LT+ Q +V C+ GP G + ++ +C+G W P
Sbjct: 12 IAPGAVHLPGWLTLERQRELVTACRAWATGPVPIRHTRLPRGGVMSVQTVCIGWHWQPY- 70
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
KY + V+G + P QL +R++ +A+ D +PD ++
Sbjct: 71 -KYTRNADDVNGERVAAFPDWMVQLGRRALLDAYG------DAQGAAD----YTPDTALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ +LG+HQ
Sbjct: 120 NFYDGQAKLGMHQ 132
>gi|325003075|ref|ZP_08124187.1| alkylated DNA repair protein [Pseudonocardia sp. P1]
Length = 242
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L +R Q +V C+E G GA++ +R +CLG W P
Sbjct: 13 LAPGAVHVPGWLDLRRQRFLVERCREWAAQGPGIRAAALPGGARMSVRTVCLGWHWIPY- 71
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + R DG + P L + ++++A+ + SPDI ++
Sbjct: 72 -RYSRTRDDQDGSPVAEFPIWLGDLGREAVADAYG-----DPTRGL-----GYSPDIALI 120
Query: 355 NFYNTSGRLGLHQ 367
N Y RLG+H+
Sbjct: 121 NHYTGDARLGMHR 133
>gi|21219556|ref|NP_625335.1| DNA repair protein [Streptomyces coelicolor A3(2)]
gi|8894829|emb|CAB96025.1| putative DNA repair protein [Streptomyces coelicolor A3(2)]
Length = 216
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L+ +Q ++ C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG DG P+ L +R++++A E + PA DI ++
Sbjct: 71 YGYAATAVDGDGAPVKPFPARLDGLARRAVTDA----------LGAEAVAPAPY-DIALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 120 NFYDADARMGMHR 132
>gi|260906339|ref|ZP_05914661.1| 2OG-Fe(II) oxygenase [Brevibacterium linens BL2]
Length = 240
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 232 REGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
R ++ PG V + +L Q I+R + GP + G + +R + LG W
Sbjct: 13 RPRVIAPGAVWVPGFLDAAAQTWIIRQYAKWQSGPVPAHATSIA-GHPMSVRTIGLGWHW 71
Query: 292 DPQTRKYGK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMD----SKVSNVEDILPA 346
P +Y + R V+G P +L +R +S A ++ D + N+ LP
Sbjct: 72 QPG--RYDRHARDVNGQRVLSFPDWMTRLGRRVVSHAAEVVADDPDSPADAPNLWGFLPE 129
Query: 347 -LSPDICIVNFYNTSGRLGLHQ 367
SPD+ +VN+Y+ ++G+HQ
Sbjct: 130 EYSPDVALVNYYDGQAKMGMHQ 151
>gi|312141760|ref|YP_004009096.1| alkylated DNA repair protein [Rhodococcus equi 103S]
gi|311891099|emb|CBH50418.1| alkylated DNA repair protein [Rhodococcus equi 103S]
Length = 221
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 13/130 (10%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKY 298
G VL+ +L + EQ +V C++ +GP G + ++ +CLG W P +Y
Sbjct: 15 GAVLVPDWLDLGEQRRLVEACRDWARGPVPMRAARLPTGHAMSVQTVCLGWHWQPY--RY 72
Query: 299 GK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
+ G +P QL +R++++A+ D + A PD ++NFY
Sbjct: 73 SRIAGDAGGGRVLPVPEWLVQLGRRAVTDAY-----DDPAAGA-----AYEPDAALINFY 122
Query: 358 NTSGRLGLHQ 367
+ + R+G+H+
Sbjct: 123 DDAARMGMHR 132
>gi|432341096|ref|ZP_19590480.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
gi|430773860|gb|ELB89504.1| alkylated DNA repair protein [Rhodococcus wratislaviensis IFP 2016]
Length = 221
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++SEA+ K ++ +PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYG------KPAD------GYTPDAAL 119
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ + ++G+HQ
Sbjct: 120 INFYDDTAKMGMHQ 133
>gi|443629631|ref|ZP_21113952.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
gi|443336856|gb|ELS51177.1| putative Alkylated DNA repair protein AlkB [Streptomyces
viridochromogenes Tue57]
Length = 217
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++R C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHVPGWLDAERQRELLRACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P +L +R++ +A VE + A DI ++
Sbjct: 71 YAYARTVVDGDGAPVKPFPGWLGELGRRAVRDALG--------EPVEAAVEAY--DIALI 120
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 121 NFYDADARMGMHR 133
>gi|395770894|ref|ZP_10451409.1| putative DNA repair protein [Streptomyces acidiscabies 84-104]
Length = 231
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 22/137 (16%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C+E + P G G + R +CLG W P
Sbjct: 13 VAPGAVHVPDWLDAAAQRDLLEACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP--D 350
Y R V DG P+ +L +R+++ A+ D P P D
Sbjct: 71 --YAFARTVVDGDGSAVKPFPAWLGELGRRAVAAAY-------------DGPPEPGPAYD 115
Query: 351 ICIVNFYNTSGRLGLHQ 367
I +VNFY+ R+G+HQ
Sbjct: 116 IGLVNFYDADARMGMHQ 132
>gi|367468751|ref|ZP_09468585.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
gi|365816188|gb|EHN11252.1| Alkylated DNA repair protein AlkB [Patulibacter sp. I11]
Length = 228
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 14/133 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT+ EQ +V C+E GP + +G + ++ +CLG W P
Sbjct: 14 IAPGAVHVPDWLTVDEQRRLVAACREWAAGPAPMRRTRLPNGGLMSVQTVCLGWHWIPY- 72
Query: 296 RKYGK-KRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + VDG + P L +R++++A+ PD +V
Sbjct: 73 -RYSRIAEDVDGQPVTPFPDWLGDLGRRALADAYDARAARDY-----------RPDAALV 120
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 121 NFYDGQARMGMHR 133
>gi|408534096|emb|CCK32270.1| alkylated DNA repair protein AlkB [Streptomyces davawensis JCM
4913]
Length = 213
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 57/137 (41%), Gaps = 25/137 (18%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C+E + P G G + R +CLG W P
Sbjct: 13 IAPGAVHVPDWLDADRQRELLTACREWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP--D 350
YG R V DG +P +L +R+ V D L +P D
Sbjct: 71 --YGYARTVVDGDGAPVKPLPDWLGELARRA----------------VRDALGTGTPPYD 112
Query: 351 ICIVNFYNTSGRLGLHQ 367
I ++NFY+ R+G+H+
Sbjct: 113 IALINFYDADARMGMHR 129
>gi|375292070|ref|YP_005126609.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
gi|376283642|ref|YP_005156852.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371577157|gb|AEX40825.1| putative DNA repair protein [Corynebacterium diphtheriae 31A]
gi|371581741|gb|AEX45407.1| putative DNA repair protein [Corynebacterium diphtheriae INCA 402]
Length = 230
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLEQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGMAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 126 RIDAALVNYYPPGAGMGMHQ 145
>gi|384101021|ref|ZP_10002075.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
gi|383841580|gb|EID80860.1| alkylated DNA repair protein [Rhodococcus imtechensis RKJ300]
Length = 208
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 1 MVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 60
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDI 351
+ Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 61 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYG--------------QPADGYTPDA 104
Query: 352 CIVNFYNTSGRLGLHQ 367
++NFY+ + ++G+HQ
Sbjct: 105 ALINFYDDTAKMGMHQ 120
>gi|376247465|ref|YP_005139409.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|376256114|ref|YP_005144005.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
gi|372114033|gb|AEX80091.1| putative DNA repair protein [Corynebacterium diphtheriae HC04]
gi|372118631|gb|AEX82365.1| putative DNA repair protein [Corynebacterium diphtheriae VA01]
Length = 230
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 126 RIDAALVNYYPLGAGMGMHQ 145
>gi|289773256|ref|ZP_06532634.1| DNA repair protein [Streptomyces lividans TK24]
gi|289703455|gb|EFD70884.1| DNA repair protein [Streptomyces lividans TK24]
Length = 216
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L+ +Q ++ C+E + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLSPGQQRELLDACREWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YG-KKRQVDGCEPSVIP--SEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG VDG V P + L +R++++A E + PA DI ++
Sbjct: 71 YGYAATAVDGDGAPVKPFLARLDDLARRAVTDA----------LGAEGVAPAPY-DIALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 120 NFYDADARMGMHR 132
>gi|363420889|ref|ZP_09308979.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
gi|359735103|gb|EHK84067.1| alkylated DNA repair protein [Rhodococcus pyridinivorans AK37]
Length = 220
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 11/132 (8%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L EQ +V +C++ + P G ++ + +CLG W P
Sbjct: 14 IAPGAVHVPDWLDPGEQRELVELCRDWARPPAPMRHTLLPGGGRMSVSTVCLGWHWSPY- 72
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R VD +P +L +R++++A+ D + PD ++N
Sbjct: 73 RYTRTAVDVDDAPVPPLPDRLVELGRRAVADAY-----DDPAAGG-----GYEPDTALIN 122
Query: 356 FYNTSGRLGLHQ 367
FY+ R+G+HQ
Sbjct: 123 FYDRDARMGMHQ 134
>gi|374983639|ref|YP_004959134.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
gi|297154291|gb|ADI04003.1| alkylated DNA repair protein [Streptomyces bingchenggensis BCW-1]
Length = 208
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Query: 246 YLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVD 305
+LT+++Q +V C+ +GP + G + ++ +C+G W P R V+
Sbjct: 6 WLTLQQQRELVAACRAWAQGPVPIRRTRLPSGGVMSVQTVCVGWHWLPY-RYSRTADDVN 64
Query: 306 GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGL 365
G + P +L +R+++EA+ + + ++ +PD ++NFY+ +LG+
Sbjct: 65 GARAAEFPGWMVELGRRALAEAYQNKREEMASAD-------YTPDTALINFYDGQAKLGM 117
Query: 366 HQ 367
HQ
Sbjct: 118 HQ 119
>gi|291300775|ref|YP_003512053.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
gi|290569995|gb|ADD42960.1| 2OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Length = 213
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 16/132 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C++ + P G + G + +R +CLGL W P
Sbjct: 11 IAPGAVHVPGWLTRSAQRDLVAACRDWSRPPAGMTRVKTPGGRWMSVRQVCLGLHWTPY- 69
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + DG P E +L +++ A+ D +PDI ++N
Sbjct: 70 -RY-SRTHTDGSHVKAFPEELARLAVAAVATAY-------------DDPGDYAPDIALIN 114
Query: 356 FYNTSGRLGLHQ 367
+Y+++ R+G+HQ
Sbjct: 115 YYDSAARMGMHQ 126
>gi|452958291|gb|EME63644.1| alkylated DNA repair protein [Amycolatopsis decaplanina DSM 44594]
Length = 206
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 21/130 (16%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L + EQ +V C +G G+ + +G + +R +CLG W P +
Sbjct: 14 PGAVHVPGWLDLDEQRRLVEAC----RGWRGYRRTRLPNGGVMSVRTVCLGWHWHPY--R 67
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y K DG P L +R++S A+ S+ E PDI +VNFY
Sbjct: 68 YSKVTG-DGSPVLPFPGWLGDLGRRAVSSAYG-------SSSYE-------PDIALVNFY 112
Query: 358 NTSGRLGLHQ 367
+++ ++GLHQ
Sbjct: 113 DSTAKMGLHQ 122
>gi|302530452|ref|ZP_07282794.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
gi|302439347|gb|EFL11163.1| alkylated DNA repair protein AlkB [Streptomyces sp. AA4]
Length = 207
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT EQ +V C +G G+ G + +R +CLG W P
Sbjct: 11 IAPGAVHVPDWLTGEEQRDLVTAC----RGWRGYRSTRLPGGGVMSVRTVCLGWQWRPY- 65
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + R+ DG P L +R++++A+ D + PD+ +VN
Sbjct: 66 -RYERLRE-DGSPVEPFPDWLADLGRRALADAYDRPADDYQ------------PDVALVN 111
Query: 356 FYNTSGRLGLHQ 367
+Y+ ++G+HQ
Sbjct: 112 YYDADAKMGMHQ 123
>gi|308178511|ref|YP_003917917.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
gi|307745974|emb|CBT76946.1| 2OG-Fe(II) oxygenase superfamily protein [Arthrobacter arilaitensis
Re117]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
Query: 234 GILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
G LRPG L +L Q IVR E G GP ++ N G + ++ +CLG W P
Sbjct: 15 GALRPGAWHLPGWLDTAAQQWIVRRFFEWGDGPVPPHRTTVN-GHPMSVQSLCLGWHWSP 73
Query: 294 QTRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y K +DG + + +L +++++EA ++ +D PD+
Sbjct: 74 H--RYSKTADDLDGQLVAPMEQWLIRLGKQAVAEATGDLR------RAQD----YQPDVA 121
Query: 353 IVNFYNTSGRLGLHQ 367
+VN+Y+ +G+HQ
Sbjct: 122 LVNYYDVQATMGMHQ 136
>gi|38232761|ref|NP_938528.1| DNA repair protein [Corynebacterium diphtheriae NCTC 13129]
gi|38199019|emb|CAE48637.1| Putative DNA repair protein [Corynebacterium diphtheriae]
Length = 246
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 142 RIDAALVNYYPPGAGMGMHQ 161
>gi|441170617|ref|ZP_20969307.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440615286|gb|ELQ78487.1| 2OG-Fe(II) oxygenase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 224
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L+ Q +V C+ +GP G + ++ +CLG W P
Sbjct: 20 PGAVHIPGWLSPERQRELVTACRGWARGPVPIRHTRLPRGGVMSVQTVCLGWHWQP---- 75
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
Y KR D + + +EF + R A A D+ +PD ++NFY
Sbjct: 76 YAYKRTADDVNGARV-AEFPDWLVRLGRAALADAYEDATAGE------GYTPDTALINFY 128
Query: 358 NTSGRLGLHQ 367
+ R+G+HQ
Sbjct: 129 DGQARMGMHQ 138
>gi|398787779|ref|ZP_10550084.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
gi|396992742|gb|EJJ03840.1| 2OG-Fe(II) oxygenase [Streptomyces auratus AGR0001]
Length = 234
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L + +Q +V C+ +GP G + ++ +C+G W P
Sbjct: 27 VAPGAVHVPGWLPLAQQRELVTACRGWARGPAPIRHTKLPRGGVMSVQTVCIGWHWQP-- 84
Query: 296 RKYGKKRQVD---GCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
Y R D G + P +L +R++ A+ D+ +PD
Sbjct: 85 --YAYTRTADDVNGARVAAFPDWMVELGRRALVVAY----RDATAGA------GYTPDTA 132
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ +LG+HQ
Sbjct: 133 LINFYDGQAKLGMHQ 147
>gi|419966199|ref|ZP_14482131.1| alkylated DNA repair protein [Rhodococcus opacus M213]
gi|414568385|gb|EKT79146.1| alkylated DNA repair protein [Rhodococcus opacus M213]
Length = 221
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VVAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++ EA+ K ++ +PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPGWLVELGRRAVCEAYG------KPAD------GYTPDAAL 119
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ + ++G+HQ
Sbjct: 120 INFYDDTAKMGMHQ 133
>gi|376286665|ref|YP_005159231.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
gi|371583999|gb|AEX47664.1| putative DNA repair protein [Corynebacterium diphtheriae BH8]
Length = 246
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKV-SNVEDILPALSPD 350
+ +T +Y Q G IP EF L AH +++ + V +++ + + D
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEILRTAAGVDASLAAWVDSYRID 144
Query: 351 ICIVNFYNTSGRLGLHQ 367
+VN+Y +G+HQ
Sbjct: 145 AALVNYYPPGAGMGMHQ 161
>gi|375289859|ref|YP_005124399.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|376244692|ref|YP_005134931.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
gi|371579530|gb|AEX43197.1| putative DNA repair protein [Corynebacterium diphtheriae 241]
gi|372107322|gb|AEX73383.1| putative DNA repair protein [Corynebacterium diphtheriae HC01]
Length = 230
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWASG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 126 RIDAALVNYYPPGAGMGMHQ 145
>gi|300790197|ref|YP_003770488.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|399542076|ref|YP_006554739.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|299799711|gb|ADJ50086.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32]
gi|398322846|gb|AFO81793.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 209
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ +V C +G G+ +G + ++ +CLG W P
Sbjct: 13 IAPGAVHLPGWLGFDEQRELVAAC----RGWPGYRHTRLPNGGVMSVKSVCLGRHWYP-- 66
Query: 296 RKYGKKRQVDGCEPSV-IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG R P + P L +R+++ A+ + A +PD+ +V
Sbjct: 67 --YGYSRTTGEGTPVLPFPDWLGDLGRRALTAAYG------------EPAEAYAPDVALV 112
Query: 355 NFYNTSGRLGLHQ 367
NFY+ + ++GLHQ
Sbjct: 113 NFYDATAKMGLHQ 125
>gi|376241795|ref|YP_005132647.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
gi|372105037|gb|AEX71099.1| putative DNA repair protein [Corynebacterium diphtheriae CDCE 8392]
Length = 246
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L AH +++ + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLR---AAAGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 142 RIDAALVNYYPLGAGMGMHQ 161
>gi|384153724|ref|YP_005536540.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
gi|340531878|gb|AEK47083.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699]
Length = 208
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L EQ +V C +G G+ +G + ++ +CLG W P
Sbjct: 12 IAPGAVHLPGWLGFDEQRELVAAC----RGWPGYRHTRLPNGGVMSVKSVCLGRHWYP-- 65
Query: 296 RKYGKKRQVDGCEPSV-IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG R P + P L +R+++ A+ + A +PD+ +V
Sbjct: 66 --YGYSRTTGEGTPVLPFPDWLGDLGRRALTAAYG------------EPAEAYAPDVALV 111
Query: 355 NFYNTSGRLGLHQ 367
NFY+ + ++GLHQ
Sbjct: 112 NFYDATAKMGLHQ 124
>gi|383648514|ref|ZP_09958920.1| alkylated DNA repair protein [Streptomyces chartreusis NRRL 12338]
Length = 213
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 55/135 (40%), Gaps = 25/135 (18%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C+ + P G G + R +CLGL W P
Sbjct: 15 PGAVHMPDWLDAEGQRELLDACRAWARPPAGLRTVRTPGGGTMTARQVCLGLHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDIC 352
YG R V DG P L +R+ V D L PA + DI
Sbjct: 71 YGYARTVVDGDGAPVKPFPEWLGDLGRRA----------------VRDTLGGPAPAYDIA 114
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ R+G+H+
Sbjct: 115 LINFYDADARMGMHR 129
>gi|424861529|ref|ZP_18285475.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
gi|356660001|gb|EHI40365.1| alkylated DNA repair protein AlkB [Rhodococcus opacus PD630]
Length = 221
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +LT EQ +V C+ P G ++ ++ +CLG W P
Sbjct: 14 VMAPGAVHVPDWLTPEEQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPY 73
Query: 295 TRKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
+ Y + + G + +P +L +R++S+A+ +D PD +
Sbjct: 74 S--YSRTAEDAGGGRVAPVPDWLVELGRRAVSDAYG---------QPDD---GYIPDAAL 119
Query: 354 VNFYNTSGRLGLHQ 367
+NFY+ + ++G+HQ
Sbjct: 120 INFYDDTAKMGMHQ 133
>gi|421744559|ref|ZP_16182534.1| alkylated DNA repair protein [Streptomyces sp. SM8]
gi|406687053|gb|EKC91099.1| alkylated DNA repair protein [Streptomyces sp. SM8]
Length = 158
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGAPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQ 367
FY +G+HQ
Sbjct: 121 FYGAGATMGMHQ 132
>gi|376289303|ref|YP_005161550.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
gi|372102699|gb|AEX66296.1| putative DNA repair protein [Corynebacterium diphtheriae C7 (beta)]
Length = 221
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 10 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 68
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 69 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 116
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 117 RIDAALVNYYPPGAGMGMHQ 136
>gi|429198522|ref|ZP_19190344.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
gi|428665784|gb|EKX64985.1| putative alkylated DNA repair protein AlkB [Streptomyces ipomoeae
91-03]
Length = 223
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 18/133 (13%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L +Q ++ C++ + P G G + R +CLG W P
Sbjct: 19 PGAVHVPDWLDAEQQRRLLDACRDWARPPAGLRTVRTPGGGTMTSRQVCLGWHWYP---- 74
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
Y R V DG P +L +R+++E + + DI ++
Sbjct: 75 YAYARTVVDGDGAPVKPFPEWLGELGRRAVAETFGAKEAATAAY-----------DIALI 123
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 124 NFYDADARMGMHR 136
>gi|376253226|ref|YP_005141685.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
gi|372116310|gb|AEX68780.1| putative DNA repair protein [Corynebacterium diphtheriae PW8]
Length = 246
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWVSG-TMSAYLMPLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKV-SNVEDILPALSPD 350
+ +T +Y Q G IP EF L AH +++ + V +++ + + D
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSAL-------AHEVLRAAAGVDASLAAWVDSYRID 144
Query: 351 ICIVNFYNTSGRLGLHQ 367
+VN+Y +G+HQ
Sbjct: 145 AALVNYYPPGAGMGMHQ 161
>gi|419859769|ref|ZP_14382419.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387983812|gb|EIK57267.1| putative DNA repair protein [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 230
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 19 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 77
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 78 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 125
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 126 RIDAALVNYYPPGAGMGMHQ 145
>gi|302549454|ref|ZP_07301796.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
gi|302467072|gb|EFL30165.1| alkylated DNA repair protein AlkB [Streptomyces viridochromogenes
DSM 40736]
Length = 213
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 25/135 (18%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L R Q ++ C+ + P G G + R +CLG W P
Sbjct: 15 PGAVHVPDWLDTRHQRDLLEACRTWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDIL--PALSPDIC 352
Y R V DG P+ +L +R+ V D L P DI
Sbjct: 71 YAYARTVVDGDGAPVKPFPAWLGELGRRA----------------VRDTLGEPVADYDIA 114
Query: 353 IVNFYNTSGRLGLHQ 367
+VNFY+ R+G+H+
Sbjct: 115 LVNFYDDDARMGMHR 129
>gi|359147424|ref|ZP_09180731.1| alkylated DNA repair protein [Streptomyces sp. S4]
Length = 219
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGAPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQ 367
FY +G+HQ
Sbjct: 121 FYGAGATMGMHQ 132
>gi|376292249|ref|YP_005163923.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
gi|372109572|gb|AEX75632.1| putative DNA repair protein [Corynebacterium diphtheriae HC02]
Length = 246
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGG----FYQPGYNDGAKLRLRMMCLGLDW 291
LRPG+V L ++ + +Q +V+ C+E+ + G ++ + G + +M LGL W
Sbjct: 35 LRPGLVHLPRWMGLDQQFAVVQQCREIARSVAGTPLAMHRQQWAYG-TMSAYLMSLGLHW 93
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP-- 349
+ +T +Y Q G IP EF L + A + V+D L A
Sbjct: 94 EYRTYQY--VSQWGGVAVPPIPVEFSALAHEVLCAA----------AGVDDSLAAWVDSY 141
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 142 RIDAALVNYYPLGAGMGMHQ 161
>gi|291455551|ref|ZP_06594941.1| alkylated DNA repair protein [Streptomyces albus J1074]
gi|291358500|gb|EFE85402.1| alkylated DNA repair protein [Streptomyces albus J1074]
Length = 219
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ--T 295
PG V + +L Q +V C+ +GP + G + ++ + LG W P T
Sbjct: 14 PGAVHVPEWLPEERQRELVEACRGWARGPVPMRRTELPGGGVMSVQSVSLGWHWSPYRYT 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R+ G V+G + +P +L +R++++A+ D A PD+ +VN
Sbjct: 74 RRAG---DVNGVPVAPLPEWLVELGRRAVADAY----QDEAAGR------AYRPDVALVN 120
Query: 356 FYNTSGRLGLHQ 367
FY +G+HQ
Sbjct: 121 FYGAGATMGMHQ 132
>gi|72161831|ref|YP_289488.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
gi|71915563|gb|AAZ55465.1| DNA-N1-methyladenine dioxygenase [Thermobifida fusca YX]
Length = 230
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 15/132 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L + EQ +V +C+E +GPGG + G + + M LG W P
Sbjct: 13 VAPGAVHVPGWLDLEEQRALVDLCREWMRGPGGMTR-HRTRGGTMSVAMTSLGWYWRPY- 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y DG +P L R ++ A+ + PA + D+ +VN
Sbjct: 71 -RYSATLP-DGRPVPPLPPVLSTLALRGLAAAYGTVPA-----------PAPAYDVALVN 117
Query: 356 FYNTSGRLGLHQ 367
FY + +G+H+
Sbjct: 118 FYAATATMGMHR 129
>gi|408680041|ref|YP_006879868.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
gi|328884370|emb|CCA57609.1| Alkylated DNA repair protein AlkB [Streptomyces venezuelae ATCC
10712]
Length = 207
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q +V C+E G+GP + Q G + +R +CLG W P
Sbjct: 13 IAPGAVHVPGWLPAARQRELVDACREWGRGPLPYRQTVLPGGGVMSVRSLCLGRRWVPY- 71
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R +D +P L + ++ EA+ D +PD +VN
Sbjct: 72 ------RYLDAVG-VPLPDWLVALGREALVEAYG----DHG---------GFTPDTALVN 111
Query: 356 FYNTSGRLGLHQ 367
FY R+G+HQ
Sbjct: 112 FYAPGARMGMHQ 123
>gi|408827177|ref|ZP_11212067.1| DNA repair protein [Streptomyces somaliensis DSM 40738]
Length = 239
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 16/131 (12%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L+ + +V C+E GP + G + +R +CLG W P +
Sbjct: 35 PGAVHMPGWLSPERRRALVEACREWACGPVPIRRTVLPGGGVMSVRTVCLGWHWLPY--R 92
Query: 298 YGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
Y + V+G + P L + +++ A+ ED PD +VNF
Sbjct: 93 YSRTADDVNGAPVTAFPDRLGALGREAVAAAYG-----------ED--GGYRPDAALVNF 139
Query: 357 YNTSGRLGLHQ 367
Y+ R+G+HQ
Sbjct: 140 YDGDARMGMHQ 150
>gi|111019320|ref|YP_702292.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
gi|110818850|gb|ABG94134.1| alkylated DNA repair protein [Rhodococcus jostii RHA1]
Length = 218
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C+ P G ++ ++ +CLG W P +
Sbjct: 12 VAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYS 71
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDIC 352
Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 72 --YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYGQ--------------PADGYTPDAA 115
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ + ++G+HQ
Sbjct: 116 LINFYDDTAKMGMHQ 130
>gi|397731719|ref|ZP_10498466.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
gi|396932527|gb|EJI99689.1| 2OG-Fe(II) oxygenase superfamily protein [Rhodococcus sp. JVH1]
Length = 221
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +LT Q +V C+ P G ++ ++ +CLG W P +
Sbjct: 15 VAPGAVHVPDWLTPAAQRHLVAECRRWATAPVPMRAAQLPTGHRMSVQTVCLGWHWKPYS 74
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPA--LSPDIC 352
Y + + G + +P +L +R++SEA+ PA +PD
Sbjct: 75 --YSRTAEDAGGGRVAPVPGWLVELGRRAVSEAYGQ--------------PADGYTPDAA 118
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY+ + ++G+HQ
Sbjct: 119 LINFYDDTAKMGMHQ 133
>gi|168054098|ref|XP_001779470.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669155|gb|EDQ55748.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 697
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 210 LSRRRNFRMEKENECRQTVDWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGF 269
LS F M E + TV IL+PGMVLL+ +L++ Q R+ E F
Sbjct: 441 LSMLCKFPMTSAMERKSTVT-----ILQPGMVLLRSWLSLDIQ---QRLVNESQSAAHLF 492
Query: 270 YQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHA 329
+P G K L M G WD +TR+Y + G P L + +A
Sbjct: 493 KRPTTASGGKYHLWQMAFGCSWDSKTRRYAAPER--GLR---FPVWMYDLGRELAFDAQK 547
Query: 330 LIKMDSKVSNVEDILPALSPDICIVNFY 357
+ ++ SN E PD+ +VNFY
Sbjct: 548 HTPVYAQGSNFE-------PDVALVNFY 568
>gi|386384036|ref|ZP_10069455.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
gi|385668516|gb|EIF91840.1| alkylated DNA repair protein [Streptomyces tsukubaensis NRRL18488]
Length = 223
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
++ PG V + +L++ Q +V C+ +GP + G + +R +CLG W P
Sbjct: 1 MIAPGAVHVPGWLSVERQRELVEACRGWARGPVPLRRTVLPGGGVMSVRTVCLGWHWQP- 59
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVED-----ILPALSP 349
Y R D + + LV+ S A + + + +P
Sbjct: 60 ---YRYSRTADDVNGARVADLPDWLVEWGRSALAAAHGIGAGGGGPSEAATGAGGAGYTP 116
Query: 350 DICIVNFYNTSGRLGLHQ 367
D ++NFY+ + R+G+HQ
Sbjct: 117 DTALINFYDGAARMGMHQ 134
>gi|433457696|ref|ZP_20415676.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
gi|432194468|gb|ELK51089.1| DNA-N1-methyladenine dioxygenase [Arthrobacter crystallopoietes
BAB-32]
Length = 222
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 14/133 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +LT+ +Q + +E GP G ++ ++ +CLG W P
Sbjct: 17 LAPGAVWVPGWLTLEQQRWLADRFREWAAGPVPIRSAKVR-GHEMSVKTVCLGWHWRPY- 74
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y ++ V+G P +L +++++EA D + A +PD +V
Sbjct: 75 -EYTREAVDVNGNRVLDFPDWMVRLGRKALAEATG----DPQAGE------AYTPDTALV 123
Query: 355 NFYNTSGRLGLHQ 367
N+Y+ R+G+HQ
Sbjct: 124 NYYDDQARMGMHQ 136
>gi|357410569|ref|YP_004922305.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
gi|320007938|gb|ADW02788.1| 2OG-Fe(II) oxygenase [Streptomyces flavogriseus ATCC 33331]
Length = 222
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 11/132 (8%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG + +LT ++ +V C+ GP G + +R +C+G W P
Sbjct: 12 IAPGAWHVPDWLTPAQRRALVTACRAWATGPVPIRHTRLPRGGVMSVRTVCVGWHWQPY- 70
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G + P +L +R++ A+ E +PD ++N
Sbjct: 71 RYTRTADDVNGLRVAEFPDWMVRLGRRAVLAAY----------GDEARAQEYTPDTALIN 120
Query: 356 FYNTSGRLGLHQ 367
FY+ R+G+HQ
Sbjct: 121 FYDGQARMGMHQ 132
>gi|395236780|ref|ZP_10414933.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
gi|394488035|emb|CCI83021.1| alkylated DNA repair protein [Turicella otitidis ATCC 51513]
Length = 272
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 19/164 (11%)
Query: 213 RRNFRMEKENECRQTVDWTREGILRP------GMVLLKHYLTIREQILIVR----ICQEL 262
RR + E + EG+ RP G+V L +L++ E +V + +++
Sbjct: 31 RRGEKTRSEEASSVATLFDDEGLDRPVREVIPGVVHLPGFLSLEESRALVEQARGLARQV 90
Query: 263 GKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQR 322
P +P G ++ + ++ LG W QT+ Y R VDG +P ++ LV R
Sbjct: 91 AGTPTAMVRPEVGAG-QMSVYILSLGYHW--QTKPYRYVRSVDGARVPALPENYQGLVDR 147
Query: 323 SMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGRLGLH 366
+ A A+ S + + +VNFY +G+H
Sbjct: 148 VLDRAAAVSDELSPWRG------RMRAETALVNFYPPGSHMGMH 185
>gi|29827984|ref|NP_822618.1| DNA repair protein [Streptomyces avermitilis MA-4680]
gi|29605085|dbj|BAC69153.1| putative DNA repair protein [Streptomyces avermitilis MA-4680]
Length = 222
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ P V + + Q + C++ + P G G + R +CLG W P
Sbjct: 13 VAPDAVHVPDWADAGRQRRFLAACRDWARPPAGLRTVHTPGGGTMTSRQVCLGWHWYP-- 70
Query: 296 RKYGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
YG R V DG +P +L + ++S+A +P + DI
Sbjct: 71 --YGYARTVVDGDGAPVKPLPDWLAELGRDAVSDALG-----------PQAVPPVPYDIA 117
Query: 353 IVNFYNTSGRLGLHQ 367
++NFY R+G+H+
Sbjct: 118 LINFYGADARMGMHR 132
>gi|423350296|ref|ZP_17327949.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
gi|404387737|gb|EJZ82842.1| alkylated DNA repair protein AlkB [Turicella otitidis ATCC 51513]
Length = 229
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 238 PGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDP 293
PG+V L +L++ E +V + +++ P +P G ++ + ++ LG W
Sbjct: 19 PGVVHLPGFLSLEESRALVEQARGLARQVAGTPTAMVRPEVGAG-QMSVYILSLGYHW-- 75
Query: 294 QTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICI 353
QT+ Y R VDG +P ++ LV R + A A+ S + + +
Sbjct: 76 QTKPYRYVRSVDGARVPALPENYQGLVDRVLDRAAAVSDELSPWRG------RMRAETAL 129
Query: 354 VNFYNTSGRLGLH 366
VNFY +G+H
Sbjct: 130 VNFYPPGSHMGMH 142
>gi|296392708|ref|YP_003657592.1| DNA repair protein [Segniliparus rotundus DSM 44985]
gi|296179855|gb|ADG96761.1| putative DNA repair protein [Segniliparus rotundus DSM 44985]
Length = 224
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 12/132 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L G V L +L++ EQ + Q +GP +G ++ +R +CLG W P
Sbjct: 19 LPAGAVHLPGWLSLPEQARLSAEFQMWARGPVPLRAAALPNGGRMSVRTVCLGWHWQPY- 77
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G + P L + + EA + PD +VN
Sbjct: 78 RYTRTADDVNGQQVLPFPDWLGDLAKAVVREACGATAART-----------YRPDAALVN 126
Query: 356 FYNTSGRLGLHQ 367
Y+ R+G+HQ
Sbjct: 127 HYDAHARMGMHQ 138
>gi|296141226|ref|YP_003648469.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
gi|296029360|gb|ADG80130.1| 2OG-Fe(II) oxygenase [Tsukamurella paurometabola DSM 20162]
Length = 221
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG L+ +L + Q I+ +E +GP + G + ++ +CLG W P
Sbjct: 7 ISPGAQLIPGWLDLDSQAWIIDRFREWARGPVPI-RSATVRGRPMSVQTVCLGWHWQPY- 64
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R + V+ P +L +R +++A + E +PD +VN
Sbjct: 65 RYSRRATDVNDARVLAFPPWLARLGRRVLADA------GYPAAEAE----GYAPDTALVN 114
Query: 356 FYNTSGRLGLHQ 367
+Y+ R+G+HQ
Sbjct: 115 YYDDRARMGMHQ 126
>gi|294628038|ref|ZP_06706598.1| DNA repair protein [Streptomyces sp. e14]
gi|292831371|gb|EFF89720.1| DNA repair protein [Streptomyces sp. e14]
Length = 214
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 246 YLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKRQV- 304
+L Q ++ C+ + P G G + R +CLG W P Y R V
Sbjct: 6 WLDAARQRELLEACRRWARPPAGLRTVRTPGGGTMTARQVCLGWHWYP----YAYARTVA 61
Query: 305 --DGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGR 362
DG P+ +L +R++++A + + DI ++NFY+ R
Sbjct: 62 DGDGAPVKPFPAWLGELGRRAVTDALG-----------PEAAREAAYDIALINFYDADAR 110
Query: 363 LGLHQ 367
+GLH+
Sbjct: 111 MGLHR 115
>gi|172040062|ref|YP_001799776.1| hypothetical protein cur_0382 [Corynebacterium urealyticum DSM
7109]
gi|171851366|emb|CAQ04342.1| hypothetical protein cu0382 [Corynebacterium urealyticum DSM 7109]
Length = 226
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+V L +L + +Q +V I +EL P +P G ++++ M+ LG W
Sbjct: 13 ITPGVVHLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFMLHLGRMW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ Y V G +P ++ +++++ A + D+ +S D PD+
Sbjct: 72 VTEP-TYRYVTHVAGHRVPQVPENLAEIARQALASA---ARYDAPLSAWAD---TFRPDM 124
Query: 352 CIVNFYNTSGRLGLHQ 367
+VN+Y +G+HQ
Sbjct: 125 ALVNYYPPGATMGMHQ 140
>gi|357590600|ref|ZP_09129266.1| alkylated DNA repair protein [Corynebacterium nuruki S6-4]
Length = 226
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 15/136 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L G V + +LT +Q ++ +GP +P G ++ RM+CLG W P
Sbjct: 25 LPAGAVHVPGWLTEGQQQDLLDRVATWARGPVAPARPRTASG-EMSSRMLCLGRHWVPTA 83
Query: 296 RKYGK--KRQVDGCEPSV--IPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ + R VDG V +P E L +R++ A D + + SPDI
Sbjct: 84 PRGHRYFDRAVDGNGAPVLPVPPELVTLARRAVFAATG----DGRAAG------RYSPDI 133
Query: 352 CIVNFYNTSGRLGLHQ 367
+VN Y +G+H+
Sbjct: 134 AVVNIYGPDAHMGMHR 149
>gi|440703309|ref|ZP_20884247.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
gi|440275019|gb|ELP63479.1| putative alkylated DNA repair protein AlkB [Streptomyces
turgidiscabies Car8]
Length = 216
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 16 IAPGAVHVPDWLDAGRQRELLDACRDWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP-- 73
Query: 296 RKYGKKRQ-VDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
YG VDG V P F + + EA A DS L DI ++
Sbjct: 74 --YGYANTVVDGDGSPVKP--FPEWLGALGREAAAAAGFDSD----------LDYDIALI 119
Query: 355 NFYNTSGRLGLHQ 367
NFY+ R+G+H+
Sbjct: 120 NFYDADARMGMHR 132
>gi|448823052|ref|YP_007416217.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
gi|448276549|gb|AGE35973.1| hypothetical protein CU7111_0378 [Corynebacterium urealyticum DSM
7111]
Length = 226
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
+ PG+V L +L + +Q +V I +EL P +P G ++++ M+ LG W
Sbjct: 13 ITPGVVHLPGWLELGQQAAVVSQLREIARELAGTPLSMSRPQLKSG-RMQVFMLHLGRMW 71
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
+ Y V G +P ++ +++++ A + D+ +S D PD+
Sbjct: 72 VTEP-TYRYVTHVAGHRVPQVPENLAEIARQALTSAG---RHDATLSAWAD---TFRPDM 124
Query: 352 CIVNFYNTSGRLGLHQ 367
+VN+Y +G+HQ
Sbjct: 125 ALVNYYPPGATMGMHQ 140
>gi|451335705|ref|ZP_21906270.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
gi|449421597|gb|EMD27004.1| Alkylated DNA repair protein AlkB [Amycolatopsis azurea DSM 43854]
Length = 191
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 21/125 (16%)
Query: 243 LKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRKYGKKR 302
+ +L + Q +V C+ G+ + +G + +R +CLG W P +Y K
Sbjct: 1 MPDWLDLDAQRRLVEACRSWR----GYRRTRLPNGGVMSVRTVCLGWHWYPY--RYSKVT 54
Query: 303 QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFYNTSGR 362
DG PS L +R++ +A+ S+ E PDI +VNFY+++ +
Sbjct: 55 D-DGSPVLPFPSWLGDLGRRAVLDAYG-------SSSYE-------PDIALVNFYDSAAK 99
Query: 363 LGLHQ 367
+G+HQ
Sbjct: 100 MGMHQ 104
>gi|300857503|ref|YP_003782486.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
gi|300684957|gb|ADK27879.1| hypothetical protein cpfrc_00086 [Corynebacterium
pseudotuberculosis FRC41]
Length = 245
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 33 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 91
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 92 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAHEAFEQA---VCLDS------DLAPWASDY 140
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 141 RIDAALVNYYPPGSGMGMHQ 160
>gi|358447503|ref|ZP_09158025.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
gi|356606603|emb|CCE56392.1| putative alkylated DNA repair protein [Corynebacterium casei UCMA
3821]
Length = 226
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 236 LRPGMVLLKHYL-TIREQILIVRICQE---LGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
++PG+ + +L T +Q L+ ++ E + P +P G ++ + M+ LG W
Sbjct: 13 IKPGVAHVPGWLDTPTQQGLVQQLRDEARLMAGTPMAMQKPVLKSGGQMSVFMLNLGHFW 72
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALS--- 348
D QT +Y + P + Q + AH ++ + V+ E++ P +
Sbjct: 73 DHQTYRYVDRMGATNVRP---------VPQNLLDIAHGGLRAAADVA--EELQPWTTNYH 121
Query: 349 PDICIVNFYNTSGRLGLHQ 367
PD+ ++NFY +G+HQ
Sbjct: 122 PDMALINFYPPGATMGMHQ 140
>gi|386739447|ref|YP_006212627.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
gi|384476141|gb|AFH89937.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 31]
Length = 228
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 16 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 74
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 75 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 123
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 124 RIDAALVNYYPPGSGMGMHQ 143
>gi|337289746|ref|YP_004628767.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
gi|334698052|gb|AEG82848.1| hypothetical protein CULC22_00130 [Corynebacterium ulcerans
BR-AD22]
Length = 228
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 13/137 (9%)
Query: 235 ILRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L++ EQ +V + + L P +Q + G + +M LG
Sbjct: 16 VVRPGIVHLPGFLSLAEQRAMVGKARAVARRLAHTPLAMHQQQWKTGT-MSAHLMSLGKH 74
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPD 350
W+ + +Y + Q G + IP F +M +A L + ++ I D
Sbjct: 75 WEYSSHQYVSEWQ--GQKVPAIPDRFLVQAYEAMRQAACLDSSLAPWTSDYRI------D 126
Query: 351 ICIVNFYNTSGRLGLHQ 367
+VN+Y +GLHQ
Sbjct: 127 AALVNYYPPGSGMGLHQ 143
>gi|389849453|ref|YP_006351688.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
gi|388246759|gb|AFK15750.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 258]
Length = 245
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 33 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 91
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 92 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 140
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 141 RIDAALVNYYPPGSGMGMHQ 160
>gi|379714376|ref|YP_005302713.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
gi|387137706|ref|YP_005693685.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|387139754|ref|YP_005695732.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|349734184|gb|AEQ05662.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis CIP 52.97]
gi|355391545|gb|AER68210.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1/06-A]
gi|377653082|gb|AFB71431.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 316]
Length = 247
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + + L P +Q + G + +M LG
Sbjct: 35 VIRPGIVHLPGFLSFAEQRVMVEKARAVARRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G + IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYNSHQYVSEWQ--GQKVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 143 RIDAALVNYYPPGSGMGMHQ 162
>gi|384503694|ref|YP_005680364.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
gi|302329798|gb|ADL19992.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 1002]
Length = 247
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 35 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 143 RIDAALVNYYPPGSGMGMHQ 162
>gi|409357380|ref|ZP_11235761.1| alkylated DNA repair protein [Dietzia alimentaria 72]
Length = 239
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 23/143 (16%)
Query: 235 ILRPGMVLLKHYLTIREQILIVRICQELG--KGPGGFYQPGYNDGAKLRLRMMCLGLDWD 292
IL PG V + +++ +Q ++R C + P PG G ++ +R + LG W
Sbjct: 14 ILGPGAVHIPDWMSRGQQEYLLRACVGWAATRAPRSIELPG---GGRMSVRTLSLGRHWL 70
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP------- 345
P R D + IP+ + + +++ A A+ D V+ V P
Sbjct: 71 PY-------RYDDDEDTPPIPAWLLRAARSALTSAAAI---DRSVALVRPGHPEAAYSPD 120
Query: 346 -ALSPDICIVNFYNTSGRLGLHQ 367
A +PD +VN Y +GLHQ
Sbjct: 121 TAFTPDAALVNLYGRGSTMGLHQ 143
>gi|383313280|ref|YP_005374135.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|384505785|ref|YP_005682454.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|384507878|ref|YP_005684546.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|385806531|ref|YP_005842928.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
gi|387135644|ref|YP_005691624.1| alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|302205240|gb|ADL09582.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis C231]
gi|308275481|gb|ADO25380.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis I19]
gi|348606089|gb|AEP69362.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 42/02-A]
gi|380868781|gb|AFF21255.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis P54B96]
gi|383803924|gb|AFH51003.1| Alpha-ketoglutarate-dependent dioxygenase AlkB [Corynebacterium
pseudotuberculosis 267]
Length = 247
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 235 ILRPGMVLLKHYLTIREQILIVR----ICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++RPG+V L +L+ EQ ++V + L P +Q + G + +M LG
Sbjct: 35 LIRPGIVHLPGFLSFAEQRVMVEKARAVACRLAHTPLAMHQQQWKSGT-MSAHLMSLGKH 93
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSP- 349
W+ + +Y + Q G E IP+ F + +A + +DS D+ P S
Sbjct: 94 WEYSSHQYVSEWQ--GQEVPDIPNNFLTQAYEAFEQA---VCLDS------DLAPWASDY 142
Query: 350 --DICIVNFYNTSGRLGLHQ 367
D +VN+Y +G+HQ
Sbjct: 143 RIDAALVNYYPPGSGMGMHQ 162
>gi|227549556|ref|ZP_03979605.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
gi|227078320|gb|EEI16283.1| DNA-N1-methyladenine dioxygenase [Corynebacterium lipophiloflavum
DSM 44291]
Length = 215
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 16/135 (11%)
Query: 236 LRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
L PG+V L ++L + +Q +V I + + P +P G +++ ++ LG W
Sbjct: 15 LMPGVVHLPNFLELEQQAELVVQTREIARSVAGTPVAMRRPMVGKG-QMKAHLLSLGWFW 73
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
T Y RQVDG +P F+ + + ++ A + + + VE
Sbjct: 74 --ATNPYRLVRQVDGYAVPPVPDNFQDIADQVLAAAREVDEAVGETIRVE---------T 122
Query: 352 CIVNFYNTSGRLGLH 366
+VNFY +G H
Sbjct: 123 ALVNFYPPGAGMGEH 137
>gi|323449197|gb|EGB05087.1| hypothetical protein AURANDRAFT_66742 [Aureococcus anophagefferens]
Length = 1793
Score = 43.5 bits (101), Expect = 0.18, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG VL++ +L+ R Q +V L P Y DGA+ + +M CLG WD
Sbjct: 1593 PGCVLVRGFLSPRRQRELVDALAALDLK---LEAPVYADGARGKCKMACLGEKWDHVHSL 1649
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPAL-SPDICIVNF 356
Y + + + LPA +PD+C+VNF
Sbjct: 1650 YAGAGAAPIPAALAAAARDAHAACAAADAS----------------LPAFDAPDVCLVNF 1693
Query: 357 YNTSG-RLGLHQ 367
Y+ G R+GLH+
Sbjct: 1694 YDHGGDRMGLHR 1705
>gi|317507590|ref|ZP_07965304.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
gi|316254110|gb|EFV13466.1| alkylated DNA repair protein AlkB [Segniliparus rugosus ATCC
BAA-974]
Length = 262
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 14/132 (10%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V L +L + EQ + E GP +G ++ + +CLG W P
Sbjct: 58 IAPGAVHLPDWLPLSEQARLAAAFAEWSCGPVPPRAASLPNGGRMSVETVCLGWHWLPY- 116
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
R V+G P L + ++ EA A PD + N
Sbjct: 117 RYTRTADDVNGRRVLPFPDWLGDLARGAVEEACGAAT-------------AYRPDAALAN 163
Query: 356 FYNTSGRLGLHQ 367
+Y R+G+HQ
Sbjct: 164 YYRPDARMGMHQ 175
>gi|271965860|ref|YP_003340056.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
gi|270509035|gb|ACZ87313.1| alkylated DNA repair protein [Streptosporangium roseum DSM 43021]
Length = 213
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 23/132 (17%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
+ PG V + +L+ Q +VR C+ + P G + G + +R +CLG W P
Sbjct: 15 IAPGAVHVPDWLSPARQRQLVRACRAWARPPLGMERIRLPGGGLMSVRTVCLGRRWRPY- 73
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+ + EP +P +L + + + + PD+ +VN
Sbjct: 74 -----RYTDEPVEP--LPQWLAEL---------------GRAAVAQTLGGPYEPDVALVN 111
Query: 356 FYNTSGRLGLHQ 367
FY+ + +G+HQ
Sbjct: 112 FYDDAATMGMHQ 123
>gi|120555020|ref|YP_959371.1| 2OG-Fe(II) oxygenase [Marinobacter aquaeolei VT8]
gi|120324869|gb|ABM19184.1| DNA-N1-methyladenine dioxygenase [Marinobacter aquaeolei VT8]
Length = 216
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 20/132 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G+V+L+ + +Q L+ I Q + P F G ++ M C G L W D
Sbjct: 21 GVVVLRRHAVKHQQALMRDIEQVARQAP--FRHMKTPGGHQMSAAMTCCGPLGWVTDETG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + + G +P F L +S EA P PD C++N
Sbjct: 79 YRYQPQDPLSGLPWPAMPESFVSLACKSAREAG---------------FPGFDPDACLIN 123
Query: 356 FYNTSGRLGLHQ 367
Y ++GLHQ
Sbjct: 124 RYQPGAKMGLHQ 135
>gi|387813610|ref|YP_005429092.1| 2OG-Fe(II) oxygenase [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338622|emb|CCG94669.1| oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA
lesions [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 216
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 52/132 (39%), Gaps = 20/132 (15%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLG-LDW--DPQT 295
G+V+L+ + +Q L+ I Q + P F G ++ M C G L W D
Sbjct: 21 GVVVLRRHAVKHQQALMRDIEQVARQAP--FRNMKTPGGHQMSAAMTCCGPLGWVTDETG 78
Query: 296 RKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVN 355
+Y + + G +P F L +S EA P PD C++N
Sbjct: 79 YRYQPQDPLSGLPWPAMPESFVSLACKSAREAG---------------FPGFDPDACLIN 123
Query: 356 FYNTSGRLGLHQ 367
Y ++GLHQ
Sbjct: 124 RYQPGAKMGLHQ 135
>gi|296120178|ref|ZP_06838731.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
gi|295966870|gb|EFG80142.1| putative DNA repair protein [Corynebacterium ammoniagenes DSM
20306]
Length = 229
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 12/136 (8%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQE----LGKGPGGFYQPGYNDGAKLRLRMMCLGLDW 291
++PG+ + +L + Q +V ++ + P +P G ++ + LG W
Sbjct: 16 IKPGVAHVPGWLDVPTQRGLVEQLRDEARIMAGTPMAMRKPILKSGGQMSTFTLHLGHHW 75
Query: 292 DPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDI 351
D Q +Y + + G +P +L R + A + + ++ + PD+
Sbjct: 76 DHQGYRYVDR--IGGTSVRPVPENLLELAHRGLRAAAEVAE------ELQPWIAGFGPDM 127
Query: 352 CIVNFYNTSGRLGLHQ 367
+VNFY +G+HQ
Sbjct: 128 ALVNFYPPGATMGMHQ 143
>gi|414078209|ref|YP_006997527.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|414078601|ref|YP_006997919.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
gi|413971625|gb|AFW95714.1| alkylated DNA repair protein [Anabaena sp. 90]
gi|413972017|gb|AFW96106.1| 2OG-Fe(II) oxygenase [Anabaena sp. 90]
Length = 197
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 19/131 (14%)
Query: 240 MVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--DPQTR 296
M+ L+ YL+ +Q I++ C+E+GK + P +G+ +M C + W D
Sbjct: 1 MLHLQQYLSESQQQEILQHCREIGK-RSPLFSPTMKNGSPFNYQMTNCGKVGWISDQNGY 59
Query: 297 KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNF 356
+Y K V IP + L + +E V D P+ C++N+
Sbjct: 60 RYDDKHPVTNKPWQPIPGVIRNLAKSLAAE-------------VGDY--NYKPETCLINY 104
Query: 357 YNTSGRLGLHQ 367
Y S +LGLHQ
Sbjct: 105 YTQSSKLGLHQ 115
>gi|333022632|ref|ZP_08450696.1| putative DNA repair protein [Streptomyces sp. Tu6071]
gi|332742484|gb|EGJ72925.1| putative DNA repair protein [Streptomyces sp. Tu6071]
Length = 222
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 15 LAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 73
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 74 -RYSRTADDVNGAPVLALPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 122
Query: 355 NFYNTSGRLGLHQ 367
N Y +G+HQ
Sbjct: 123 NHYGPGATMGMHQ 135
>gi|318059514|ref|ZP_07978237.1| alkylated DNA repair protein [Streptomyces sp. SA3_actG]
gi|318079147|ref|ZP_07986479.1| alkylated DNA repair protein [Streptomyces sp. SA3_actF]
Length = 219
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 12 LAPGAVHVPDWLPPESRRALVEACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 70
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 71 -RYSRTADDVNGAPVLPLPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 119
Query: 355 NFYNTSGRLGLHQ 367
N Y +G+HQ
Sbjct: 120 NHYGPGATMGMHQ 132
>gi|373248709|emb|CCD31822.1| alkylated DNA repair protein [Streptomyces albus subsp. albus]
Length = 223
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 13/130 (10%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V + +L Q ++ C+ + P G G + R +CLG W P R
Sbjct: 18 PGAVHVPDWLGTGRQHELLDACRGWARPPAGLRTVHVPGGGTMSARQVCLGRHWVPY-RY 76
Query: 298 YGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIVNFY 357
G DG P +L Q +++ A+ D+ +VNFY
Sbjct: 77 TGTAVDGDGAPVKPFPGWLDELAQSALAAAYGEAAEPDPY------------DVALVNFY 124
Query: 358 NTSGRLGLHQ 367
R+G+H+
Sbjct: 125 AEGTRMGMHR 134
>gi|302523470|ref|ZP_07275812.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
gi|302432365|gb|EFL04181.1| alkylated DNA repair protein AlkB [Streptomyces sp. SPB78]
Length = 219
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 12 LAPGAVHVPDWLPPESRRALVGACRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 70
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P+ L +R+++ A+ + ++ PD+ +V
Sbjct: 71 -RYSRTADDVNGAPVLPLPAWLADLGRRAIAAAYDDEEAAAR----------YEPDVALV 119
Query: 355 NFYNTSGRLGLHQ 367
N Y +G+HQ
Sbjct: 120 NHYGPGATMGMHQ 132
>gi|19551394|ref|NP_599396.1| alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|62389038|ref|YP_224440.1| DNA repair protein [Corynebacterium glutamicum ATCC 13032]
gi|21322908|dbj|BAB97537.1| Alkylated DNA repair protein [Corynebacterium glutamicum ATCC
13032]
gi|41324371|emb|CAF18711.1| PUTATIVE DNA REPAIR PROTEIN [Corynebacterium glutamicum ATCC 13032]
gi|385142323|emb|CCH23362.1| alkylated DNA repair protein [Corynebacterium glutamicum K051]
Length = 230
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGK----GPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
G+V L ++L + EQ +V ++L + P +P G ++ + M+ LG W
Sbjct: 22 GVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYWASN 80
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y VDG +P F L R AL+ S ++++ A + +V
Sbjct: 81 PYRY--VDVVDGFPVPPLPDSFVDLAHR------ALLSAGSLSNSLQSWSEAYRAEAALV 132
Query: 355 NFYNTSGRLGLHQ 367
N+Y+ +G+HQ
Sbjct: 133 NYYSPDASMGMHQ 145
>gi|345852114|ref|ZP_08805066.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
gi|345636394|gb|EGX57949.1| alkylated DNA repair protein [Streptomyces zinciresistens K42]
Length = 237
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 17/143 (11%)
Query: 238 PGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQTRK 297
PG V L +L Q ++ C++ + P G G + R +CLG W P
Sbjct: 15 PGAVHLPDWLDGPAQRRLLDACRQWARPPAGLRTVRTPGGGTMTARQVCLGRHWYP---- 70
Query: 298 YGKKRQV---DGCEPSVIPSEFKQLVQRSMSEAHALIKM----------DSKVSNVEDIL 344
YG DG P L + ++ +A+ S +
Sbjct: 71 YGYAPTAVDGDGSPVKPFPPWLGDLARHAVRDAYGPPGGGAGTPGEPNPQSGAAPAAPAA 130
Query: 345 PALSPDICIVNFYNTSGRLGLHQ 367
+ DI ++NFY+ R+G+H+
Sbjct: 131 SEPAYDIALINFYDADARMGMHR 153
>gi|145294267|ref|YP_001137088.1| hypothetical protein cgR_0223 [Corynebacterium glutamicum R]
gi|417971478|ref|ZP_12612402.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
gi|140844187|dbj|BAF53186.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044222|gb|EGV39902.1| hypothetical protein CgS9114_10667 [Corynebacterium glutamicum
S9114]
Length = 230
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 239 GMVLLKHYLTIREQILIVRICQELGK----GPGGFYQPGYNDGAKLRLRMMCLGLDWDPQ 294
G+V L ++L + EQ +V ++L + P +P G ++ + M+ LG W
Sbjct: 22 GVVHLPNFLGLAEQKALVAQARDLAREVVGTPLAMVRPKLKSG-QMSVHMLHLGKYWASN 80
Query: 295 TRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y VDG +P F L R AL+ S ++++ A + +V
Sbjct: 81 PYRY--VDVVDGFPVPPLPDSFVDLAHR------ALLSAGSLSNSLQSWSEAYRAEAALV 132
Query: 355 NFYNTSGRLGLHQ 367
N+Y+ +G+HQ
Sbjct: 133 NYYSPDASMGMHQ 145
>gi|295835146|ref|ZP_06822079.1| DNA repair protein [Streptomyces sp. SPB74]
gi|295825338|gb|EDY44784.2| DNA repair protein [Streptomyces sp. SPB74]
Length = 222
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLDWDPQT 295
L PG V + +L + +V C++ +GP + G + + +CLG W P
Sbjct: 15 LAPGAVHVPDWLPPERRGALVEECRDWARGPVPMRRARLPRGGVMSVDSLCLGRHWLPY- 73
Query: 296 RKYGKKR-QVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDICIV 354
+Y + V+G +P +L +R+++ A+ + ++ PD+ +V
Sbjct: 74 -RYSRTADDVNGAPVLPLPGWLGELGRRAIAAAYDDEEAAAR----------YEPDVALV 122
Query: 355 NFYNTSGRLGLHQ 367
N Y +G+HQ
Sbjct: 123 NHYGPGATMGMHQ 135
>gi|385788858|ref|YP_005819967.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
gi|310768130|gb|ADP13080.1| DNA repair system specific for alkylated DNA [Erwinia sp. Ejp617]
Length = 213
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 229 DWTREGILRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CL 287
D R+ L G V+L+ LI +I P FY G ++ + M C
Sbjct: 8 DQPRQEPLAEGAVILRRRARDITPRLIAQIEDIAASNP--FYHRITPGGHRMSVAMTHCG 65
Query: 288 GLDWDPQTR--KYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP 345
L W +R +Y + + G +P +F+QL Q EA
Sbjct: 66 DLGWSTDSRGYQYSAQDEASGQRWPAMPPQFRQLAQECAGEAG---------------FS 110
Query: 346 ALSPDICIVNFYNTSGRLGLHQ 367
+PD C++N Y ++ LHQ
Sbjct: 111 GFNPDACLINRYEPGAKMTLHQ 132
>gi|451942955|ref|YP_007463591.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
gi|451902342|gb|AGF71229.1| DNA repair protein [Corynebacterium halotolerans YIM 70093 = DSM
44683]
Length = 230
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 235 ILRPGMVLLKHYLTIREQILIV----RICQELGKGPGGFYQPGYNDGAKLRLRMMCLGLD 290
++ PG+ L +L + EQ +V I + + P ++P G ++ ++ LG
Sbjct: 17 LVAPGVAHLPGWLPVSEQERLVSQARAIARSVAGTPLAMHRPVVGTG-QMSAYILSLGRY 75
Query: 291 WDPQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILP----A 346
W +TR YG R + G + +P E+ +L + ++S A + E++ P A
Sbjct: 76 W--RTRPYGYVRSLGGVDVPAVPPEYGRLARAALSAASGV---------AEELAPWADGA 124
Query: 347 LSPDICIVNFYNTSGRLGLH 366
+ +VN+Y + +GLH
Sbjct: 125 FRAETALVNYYPSGASMGLH 144
>gi|364284959|gb|AEW47955.1| GHF95 protein [uncultured bacterium D2_11]
Length = 423
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 10/164 (6%)
Query: 65 GNGLSGNEFYSSRGKNGRNRSRMSKWKVHQSASPSFSNEDFPPLDVNLVSSSKGGHIDKM 124
G LSG FY G+ R + + W + + E++ P V + G + K
Sbjct: 154 GVKLSGTRFYVLNGQGARLQRALIAWMLDLHTQQGY-REEYLPFMVKQQTLYAAGQLPKF 212
Query: 125 KTRIDLGPGQKTDIIVSTQLEDSPLSNYVSQHDDSSPSAPLFNKEMKHAHANASPYKRNY 184
K+ + + ++ + ++ PL+N S+ PL H A ++R
Sbjct: 213 KSNLYHDAEEDYWMVPTAEV---PLTNLHGGEILSAEQLPL------HYCAYTPCFRREK 263
Query: 185 FKHELDAKKWDSSHRLHNVEPFDICLSRRRNFRMEKENECRQTV 228
K D + H+ VE + CL + +EK E + V
Sbjct: 264 MKAGSDVRGIKRGHQFDKVEMYKFCLPENSDDELEKMREDAEAV 307
>gi|119898584|ref|YP_933797.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
gi|119670997|emb|CAL94910.1| DNA-directed DNA polymerase [Azoarcus sp. BH72]
Length = 221
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 20/135 (14%)
Query: 236 LRPGMVLLKHYLTIREQILIVRICQELGKGPGGFYQPGYNDGAKLRLRMM-CLGLDW--D 292
L PG VLL+ + + L+ + + P F +G ++ + M C L W D
Sbjct: 21 LAPGAVLLRQRALAQAEALLAGVAEVTAVAP--FRWMSTPNGYRMSVAMTNCGALGWVSD 78
Query: 293 PQTRKYGKKRQVDGCEPSVIPSEFKQLVQRSMSEAHALIKMDSKVSNVEDILPALSPDIC 352
+Y +P+ F +L +++ ++A PA PD C
Sbjct: 79 ATGYRYAPLDPARDAPWPAMPAAFLELARQAAADAG---------------FPAFEPDAC 123
Query: 353 IVNFYNTSGRLGLHQ 367
+VN Y RL LHQ
Sbjct: 124 LVNRYAPGARLSLHQ 138
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,183,714,425
Number of Sequences: 23463169
Number of extensions: 268102929
Number of successful extensions: 581358
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 130
Number of HSP's that attempted gapping in prelim test: 581157
Number of HSP's gapped (non-prelim): 185
length of query: 370
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 226
effective length of database: 8,980,499,031
effective search space: 2029592781006
effective search space used: 2029592781006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)