BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017495
(370 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KYW|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYW|F Chain F, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase In Complex With 5-
Hydroxyconiferaldehyde
pdb|1KYZ|A Chain A, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|C Chain C, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
pdb|1KYZ|E Chain E, Crystal Structure Analysis Of Caffeic Acid5-Hydroxyferulic
Acid 35-O-Methyltransferase Ferulic Acid Complex
Length = 365
Score = 404 bits (1038), Expect = e-113, Method: Compositional matrix adjust.
Identities = 188/370 (50%), Positives = 261/370 (70%), Gaps = 7/370 (1%)
Query: 1 MANSKPKRNNATSVDQEEIGKLAVRLANAAVLPMVLKSAIELNVIDXXXXXXXXEDGHGE 60
M ++ + T + EE A++LA+A+VLPM+LKSA+EL++++ + G G
Sbjct: 1 MGSTGETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIA-----KAGPGA 55
Query: 61 LLSASKIAARLPTKNPDAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFL 120
+S +IA++LPT NPDAP +LDRML LLA Y IL CS++ +G+V+R+YG A + K+L
Sbjct: 56 QISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYL 115
Query: 121 IKNQDDDDGSVAPLFLLHHDKVFMESWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFN 180
+KN+D S++ L L++ DKV MESWYHLKD +L+GGIPF +AYGMT FEY GTDPRFN
Sbjct: 116 VKNEDGV--SISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFN 173
Query: 181 GVFNEAMSNHSALVMNKILDVYRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLP 240
VFN+ MS+HS + M KIL+ Y I S+YP IKGI+FDLP
Sbjct: 174 KVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLP 233
Query: 241 HVLANAPSFPGVEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKV 300
HV+ +APS+PGVEHVGGDMF ++P+ DA+F+KW+ H W+DEHCLK LKNC+EALP+NGKV
Sbjct: 234 HVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKV 293
Query: 301 IIVESILPLVPENQASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIVCCA 360
I+ E ILP+ P++ ++ V D+ MLA GG+ER++KE+E LAK +GF G ++ C A
Sbjct: 294 IVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNA 353
Query: 361 YNSWVMEFHK 370
+N+++MEF K
Sbjct: 354 FNTYIMEFLK 363
>pdb|3REO|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3REO|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3REO|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3REO|D Chain D, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|A Chain A, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|B Chain B, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|C Chain C, Monolignol O-Methyltransferase (Momt)
pdb|3TKY|D Chain D, Monolignol O-Methyltransferase (Momt)
Length = 368
Score = 380 bits (976), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/359 (50%), Positives = 247/359 (68%), Gaps = 6/359 (1%)
Query: 12 TSVDQEEIGKLAVRLANAAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAARL 71
T EE A++LA+AAVLPM LK+AIEL+V++ +S ++IAA+L
Sbjct: 14 THSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSG----YISPAEIAAQL 69
Query: 72 PTKNPDAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSV 131
PT NP+AP +LDR+L LLASY ++ +L+ +G+VER+YG AP+CKFL KN+D S+
Sbjct: 70 PTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGV--SL 127
Query: 132 APLFLLHHDKVFMESWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAMSNHS 191
AP LL DKV +E W++LKD ILEGGIPF +AYGM F+Y GTD R N VFN+ MS++S
Sbjct: 128 APFLLLATDKVLLEPWFYLKDAILEGGIPFNKAYGMNIFDYHGTDHRINKVFNKGMSSNS 187
Query: 192 ALVMNKILDVYRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPG 251
+ M KIL++Y MI ++YP I I+FDLPHV+ +AP+F G
Sbjct: 188 TITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSG 247
Query: 252 VEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVP 311
VEH+GGDMF+ VP+GDAIF+KW+ H W+DEHCLKLLKNC+ ALP++GKVI+ E ILP P
Sbjct: 248 VEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSP 307
Query: 312 ENQASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIVCCAYNSWVMEFHK 370
+ ++ +V D MLA GG+ER++KE++ALA SGF G ++ CA+N++VMEF K
Sbjct: 308 DPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366
>pdb|3P9C|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Bound To
Sah
pdb|3P9I|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9I|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Sinapaldehyde
pdb|3P9K|A Chain A, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|B Chain B, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|C Chain C, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
pdb|3P9K|D Chain D, Crystal Structure Of Perennial Ryegrass Lpomt1 Complexed
With S- Adenosyl-L-Homocysteine And Coniferaldehyde
Length = 364
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 176/361 (48%), Positives = 249/361 (68%), Gaps = 10/361 (2%)
Query: 11 ATSVDQEEIGKLAVRLANAAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAAR 70
A S D E+ A++LA+++VLPM LK+AIEL +++ G+ L+ +++AA+
Sbjct: 13 AASAD-EDACMFALQLASSSVLPMTLKNAIELGLLEILVAAG------GKSLTPTEVAAK 65
Query: 71 LPTK-NPDAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDG 129
LP+ NP+AP ++DR+L LLASY+++ C ++ G +G++ R YGAAP+CKFL N+D
Sbjct: 66 LPSAANPEAPDMVDRILRLLASYNVVTCLVEEGKDGRLSRSYGAAPVCKFLTPNEDGV-- 123
Query: 130 SVAPLFLLHHDKVFMESWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAMSN 189
S+A L L++ DKV MESWY+LKD +L+GGIPF +AYGM+ FEY GTDPRFN VFNE M N
Sbjct: 124 SMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMSAFEYHGTDPRFNRVFNEGMKN 183
Query: 190 HSALVMNKILDVYRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSF 249
HS ++ K+L++Y I + YP IKG++FDLPHV++ AP F
Sbjct: 184 HSIIITKKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQF 243
Query: 250 PGVEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPL 309
PGV HVGGDMF+ VP GD I +KW+LH W+D+HC LLKNC++ALP +GKV++V+ ILP+
Sbjct: 244 PGVTHVGGDMFKEVPSGDTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303
Query: 310 VPENQASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIVCCAYNSWVMEFH 369
PE SS VF D+ MLA GGRER ++E++ALA+ +GF+G++ N+W +EF
Sbjct: 304 NPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQALARGAGFTGVKSTYIYANAWAIEFT 363
Query: 370 K 370
K
Sbjct: 364 K 364
>pdb|1FP1|D Chain D, Crystal Structure Analysis Of Chalcone O-Methyltransferase
Length = 372
Score = 261 bits (667), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/366 (39%), Positives = 215/366 (58%), Gaps = 12/366 (3%)
Query: 10 NATSVDQEEIGKL-AVRLANAAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIA 68
+ATS E+ L A+ L V P VL +AI+LN+ + G +S S+IA
Sbjct: 14 SATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPP----GAFMSPSEIA 69
Query: 69 ARLP--TKNPDAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDD 126
++LP T++ D P LDRML LLASY +L + + ++G ERVYG + + K+L+ D+
Sbjct: 70 SKLPASTQHSDLPNRLDRMLRLLASYSVLTSTTRTIEDGGAERVYGLSMVGKYLVP--DE 127
Query: 127 DDGSVAPLFLLHHDKVFMESWYHLKDVILEGGIP-FRRAYGMTQFEYLGTDPRFNGVFNE 185
G +A ++ W + K+ +++ I F+ +G+T++E++G D + N +FN+
Sbjct: 128 SRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNK 187
Query: 186 AMSNHSALVMNKILDVYRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLAN 245
+M + A M ++L++Y +I S+YP IKGI+FDLP V+ N
Sbjct: 188 SMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN 247
Query: 246 APSFPGVEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVES 305
AP G+EHVGGDMF +VP+GDA+ LK + H W+DE C++ L NC +AL NGKVIIVE
Sbjct: 248 APPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEF 307
Query: 306 ILPLVPENQASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIVCCAYNSW- 364
ILP P S +V D M T GGRER++K+YE L+K SGFS ++ C A+NS
Sbjct: 308 ILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLG 366
Query: 365 VMEFHK 370
VMEF+K
Sbjct: 367 VMEFYK 372
>pdb|1FPQ|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Chalcone O- Methyltransferase
Length = 372
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 204/366 (55%), Gaps = 12/366 (3%)
Query: 10 NATSVDQEEIGKL-AVRLANAAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIA 68
+ATS E+ L A L V P VL +AI+LN+ + G S S+IA
Sbjct: 14 SATSEQTEDSACLSAXVLTTNLVYPAVLNAAIDLNLFEIIAKATPP----GAFXSPSEIA 69
Query: 69 ARLP--TKNPDAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDD 126
++LP T++ D P LDR L LLASY +L + + ++G ERVYG + + K+L+ D+
Sbjct: 70 SKLPASTQHSDLPNRLDRXLRLLASYSVLTSTTRTIEDGGAERVYGLSXVGKYLVP--DE 127
Query: 127 DDGSVAPLFLLHHDKVFMESWYHLKDVILEGGIP-FRRAYGMTQFEYLGTDPRFNGVFNE 185
G +A ++ W + K+ +++ I F+ +G+T++E+ G D + N +FN+
Sbjct: 128 SRGYLASFTTFLCYPALLQVWXNFKEAVVDEDIDLFKNVHGVTKYEFXGKDKKXNQIFNK 187
Query: 186 AMSNHSALVMNKILDVYRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLAN 245
+ + A + L++Y +I S+YP IKGI+FDLP V+ N
Sbjct: 188 SXVDVCATEXKRXLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN 247
Query: 246 APSFPGVEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVES 305
AP G+EHVGGD F +VP+GDA LK + H W+DE C++ L NC +AL NGKVIIVE
Sbjct: 248 APPLSGIEHVGGDXFASVPQGDAXILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEF 307
Query: 306 ILPLVPENQASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIVCCAYNSW- 364
ILP P S +V D T GGRER++K+YE L+K SGFS ++ C A+NS
Sbjct: 308 ILPEEPNTSEESKLVSTLDNLXFI-TVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLG 366
Query: 365 VMEFHK 370
V EF+K
Sbjct: 367 VXEFYK 372
>pdb|1FP2|A Chain A, Crystal Structure Analysis Of Isoflavone
O-Methyltransferase
Length = 352
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 153/334 (45%), Gaps = 27/334 (8%)
Query: 29 AAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAA--RLPTKNPDAPFLLDRML 86
A + M LK A+E+N+ + HG+ +S S + + ++P+ L R L
Sbjct: 26 AFIDSMSLKWAVEMNIPNII-------QNHGKPISLSNLVSILQVPSSKIGNVRRLMRYL 78
Query: 87 SLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMES 146
+ ++I+ + E Y + L++ D +AP+ D S
Sbjct: 79 AHNGFFEIIT---------KEEESYALTVASELLVRGSD---LCLAPMVECVLDPTLSGS 126
Query: 147 WYHLKDVILEGGIP-FRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXX 205
++ LK I E + F G +++L +P +N FN+AM++ S L+ + D
Sbjct: 127 YHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVF 186
Query: 206 XXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVPR 265
+I +P +K I FD P V+ N + +VGGDMF ++P
Sbjct: 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPN 246
Query: 266 GDAIFLKWMLHGWTDEHCLKLLKNCWEALPEN---GKVIIVESILPLVPENQASSHIVFE 322
DA+ LK++LH WTD+ CL++LK C EA+ + GKV I++ ++ + + I
Sbjct: 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLL 306
Query: 323 QDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEI 356
D+ M G+ER+++E++ L +GF +I
Sbjct: 307 MDVNM--ACLNGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|1ZGA|A Chain A, Crystal Structure Of Isoflavanone 4'-o-methyltransferase
Complexed With (+)-6a-hydroxymaackiain
pdb|1ZHF|A Chain A, Crystal Structure Of Selenomethionine Substituted
Isoflavanone 4'-O- Methyltransferase
Length = 357
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 21/336 (6%)
Query: 31 VLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAARLPTKNPDAPFLLDRMLSLLA 90
V M LKSA+EL + D HG+ ++ S++A+ L +P +L R L LL
Sbjct: 21 VSSMALKSAMELGIADAIH-------NHGKPMTLSELASSLKL-HPSKVNILHRFLRLLT 72
Query: 91 SYDILRCSLQNGDNGQVER--VYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMESWY 148
++ G G E Y P K LI + S+ LH + M W
Sbjct: 73 HNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVK-GALHPSSLDM--WS 129
Query: 149 HLKDVILEGG--IPFRRAYGMTQFEYLGTDPRFN--GVFNEAMSNHSALVMNKILDVYRX 204
K E F A G + +++L D + +F +AM++ S + + + R
Sbjct: 130 SSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRV 189
Query: 205 XXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVP 264
+I +P +K FD P V+ N + VGGDMF+++P
Sbjct: 190 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIP 249
Query: 265 RGDAIFLKWMLHGWTDEHCLKLLKNCWEALP---ENGKVIIVESILPLVPENQASSHIVF 321
DA+ LKW+LH W DE LK+LKN EA+ ++GKVII++ + +++ + +
Sbjct: 250 SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQL 309
Query: 322 EQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIV 357
+ DL ML G+ER+K+E+E L ++GFS +I
Sbjct: 310 DYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKIT 344
>pdb|1ZG3|A Chain A, Crystal Structure Of The Isoflavanone
4'-O-Methyltransferase Complexed With Sah And
2,7,4'-Trihydroxyisoflavanone
Length = 358
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 158/339 (46%), Gaps = 27/339 (7%)
Query: 31 VLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAARLPTKNPDAPFLLDRMLSLLA 90
V M LKSA+EL + D HG+ ++ S++A+ L +P +L R L LL
Sbjct: 22 VSSMALKSAMELGIADAIH-------NHGKPMTLSELASSLKL-HPSKVNILHRFLRLLT 73
Query: 91 SYDILRCSLQNGDNGQVER--VYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMES-- 146
++ G G E Y P K LI + S+ LH + M S
Sbjct: 74 HNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVK-GALHPSSLDMWSSS 132
Query: 147 --WYHL-KDVILEGGIPFRRAYGMTQFEYLGTDPRFN--GVFNEAMSNHSALVMNKILDV 201
W++ K+ L F A G + +++L D + +F +AM++ S + + +
Sbjct: 133 KKWFNEDKEQTL-----FECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQEN 187
Query: 202 YRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFE 261
R +I +P +K FD P V+ N + VGGDMF+
Sbjct: 188 KRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFK 247
Query: 262 NVPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALP---ENGKVIIVESILPLVPENQASSH 318
++P DA+ LKW+LH W DE LK+LKN EA+ ++GKVII++ + +++ +
Sbjct: 248 SIPSADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTE 307
Query: 319 IVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIV 357
+ + DL ML G+ER+K+E+E L ++GFS +I
Sbjct: 308 LQLDYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKIT 345
>pdb|1ZGJ|A Chain A, Crystal Structure Of Isoflavanone 4'-O-Methyltransferase
Complexed With (+)-Pisatin
Length = 354
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/336 (28%), Positives = 154/336 (45%), Gaps = 21/336 (6%)
Query: 31 VLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAARLPTKNPDAPFLLDRMLSLLA 90
V M LKSA+EL + D HG+ ++ S++A+ L +P +L R L LL
Sbjct: 18 VSSMALKSAMELGIADAIH-------NHGKPMTLSELASSLKL-HPSKVNILHRFLRLLT 69
Query: 91 SYDILRCSLQNGDNGQVER--VYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMESWY 148
++ G G E Y P K LI + S+ LH + M W
Sbjct: 70 HNGFFAKTIVKGKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVK-GALHPSSLDM--WS 126
Query: 149 HLKDVILEGG--IPFRRAYGMTQFEYLGTDPRFN--GVFNEAMSNHSALVMNKILDVYRX 204
K E F A G + +++L D + +F +AM++ S + + + R
Sbjct: 127 SSKKWFNEDKEQTLFECATGESFWDFLNKDSESSTLSMFQDAMASDSRMFKLVLQENKRV 186
Query: 205 XXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVP 264
+I +P +K FD P V+ N + VGGDMF+++P
Sbjct: 187 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVGGDMFKSIP 246
Query: 265 RGDAIFLKWMLHGWTDEHCLKLLKNCWEALP---ENGKVIIVESILPLVPENQASSHIVF 321
DA+ LKW+LH W DE LK+LKN EA+ ++GKVII++ + +++ + +
Sbjct: 247 SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQL 306
Query: 322 EQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIV 357
+ DL ML G+ER+K+E+E L ++GFS +I
Sbjct: 307 DYDLVMLTMFL-GKERTKQEWEKLIYDAGFSSYKIT 341
>pdb|2QYO|A Chain A, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
pdb|2QYO|B Chain B, Crystal Structure Of Isoflavone O-Methyltransferase
Homolog In Complex With Biochanin A And Sah
Length = 357
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 157/334 (47%), Gaps = 22/334 (6%)
Query: 29 AAVLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAA--RLPTKNPDAPFLLDRML 86
A V M LK +IE+N+ + HG+ ++ S + + ++P+ D L R L
Sbjct: 26 AFVDSMSLKWSIEMNIPNIIH-------NHGKPITLSNLVSILQIPSTKVDNVQRLMRYL 78
Query: 87 SLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMES 146
+ ++I+ N + E Y + L+K + +AP+ D S
Sbjct: 79 AHNGFFEII----TNQELENEEEAYALTVASELLVKGTE---LCLAPMVECVLDPTLSTS 131
Query: 147 WYHLKDVILEGGIP-FRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXX 205
+++LK + E + F G +E+L +P +N ++N+A+++ S ++ + D
Sbjct: 132 FHNLKKWVYEEDLTLFAVNLGCDLWEFLNKNPEYNTLYNDALASDSKMINLAMKDCNLVF 191
Query: 206 XXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVPR 265
+I +P + + FD P V+ N + +VGGDMF +VP+
Sbjct: 192 EGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPK 251
Query: 266 GDAIFLKWMLHGWTDEHCLKLLKNCWEALPEN---GKVIIVESILPLVPENQASSHIVFE 322
DA+ LK +LH WTD+ C+K+LK C EA+ + GKVI+++ ++ + + I
Sbjct: 252 ADAVLLKAVLHDWTDKDCIKILKKCKEAVTSDGKRGKVIVIDMVINEKKDENQLTQIKLL 311
Query: 323 QDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEI 356
++ + G+ER+++E++ L +GF +I
Sbjct: 312 MNVTI--SCVNGKERNEEEWKKLFIEAGFQDYKI 343
>pdb|1FPX|A Chain A, Crystal Structure Analysis Of Selenomethionine Substituted
Isoflavone O-Methyltransferase
Length = 352
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 145/327 (44%), Gaps = 27/327 (8%)
Query: 36 LKSAIELNVIDXXXXXXXXEDGHGELLSASKIAA--RLPTKNPDAPFLLDRMLSLLASYD 93
LK A+E N+ + HG+ +S S + + ++P+ L R L+ ++
Sbjct: 33 LKWAVEXNIPNII-------QNHGKPISLSNLVSILQVPSSKIGNVRRLXRYLAHNGFFE 85
Query: 94 ILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMESWYHLKDV 153
I+ + E Y + L++ D +AP D S++ LK
Sbjct: 86 IIT---------KEEESYALTVASELLVRGSD---LCLAPXVECVLDPTLSGSYHELKKW 133
Query: 154 ILEGGIP-FRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXXXXXXXXX 212
I E + F G +++L +P +N FN+A ++ S L+ + D
Sbjct: 134 IYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAXASDSKLINLALRDCDFVFDGLESIV 193
Query: 213 XXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVPRGDAIFLK 272
+I +P +K I FD P V+ N + +VGGD F ++P DA+ LK
Sbjct: 194 DVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDXFTSIPNADAVLLK 253
Query: 273 WMLHGWTDEHCLKLLKNCWEALPEN---GKVIIVESILPLVPENQASSHIVFEQDLFMLA 329
++LH WTD+ CL++LK C EA+ + GKV I++ ++ + + I D+
Sbjct: 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDXVIDKKKDENQVTQIKLLXDVN--X 311
Query: 330 QTTGGRERSKKEYEALAKNSGFSGLEI 356
G+ER+++E++ L +GF +I
Sbjct: 312 ACLNGKERNEEEWKKLFIEAGFQHYKI 338
>pdb|3LST|A Chain A, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
pdb|3LST|B Chain B, Crystal Structure Of Calo1, Methyltransferase In
Calicheamicin Biosynthesis, Sah Bound Form
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 10/133 (7%)
Query: 224 MITSRYPCIKGISFDLPHVLA----NAPSFPGV-EHVGGDMFENVPRGDAIFLKWMLHGW 278
+ +P ++G+ D V+A +AP G + V GD VP D LK +LH W
Sbjct: 201 TVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPHADVHVLKRILHNW 260
Query: 279 TDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQASSHIVFEQDLFMLAQTTGGRERS 338
DE +++L NC P +G+V++++++ VPE +H E D LA T G+ER+
Sbjct: 261 GDEDSVRILTNCRRVXPAHGRVLVIDAV---VPEGN-DAHQSKEXDFXXLAART-GQERT 315
Query: 339 KKEYEALAKNSGF 351
E E L +G
Sbjct: 316 AAELEPLFTAAGL 328
>pdb|2IP2|A Chain A, Structure Of The Pyocyanin Biosynthetic Protein Phzm
pdb|2IP2|B Chain B, Structure Of The Pyocyanin Biosynthetic Protein Phzm
Length = 334
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 117/284 (41%), Gaps = 33/284 (11%)
Query: 84 RMLSLLASYDILRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVF 143
R++ LL +++I + ++G Y P L D +GS + L + ++ F
Sbjct: 60 RLMRLLVAFEIFQGDTRDG--------YANTPTSHLL----RDVEGSFRDMVLFYGEE-F 106
Query: 144 MESWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAM--SNHSALVMNKILDV 201
+W + +L G F A+G + YL P F AM SN + + ++LD
Sbjct: 107 HAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFHEIPRLLD- 165
Query: 202 YRXXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLA----NAPSFPGVEH--- 254
+R I P +G+ D L N S E
Sbjct: 166 FRGRSFVDVGGGSGELTKA----ILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSL 221
Query: 255 VGGDMFENVPRGDAIFLKWMLHGWTDEHC-LKLLKNCWEALPENGKVIIVESILPLVPEN 313
VGGDM + VP I+L + G DE L+LL NC EA+ +G+V+++E + +
Sbjct: 222 VGGDMLQEVPSNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPS 281
Query: 314 QASSHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEIV 357
S ++++ LFM GR R+ +E L GF+ IV
Sbjct: 282 PMS--VLWDVHLFM---ACAGRHRTTEEVVDLLGRGGFAVERIV 320
>pdb|4A6D|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam
pdb|4A6E|A Chain A, Crystal Structure Of Human N-Acetylserotonin
Methyltransferase (Asmt) In Complex With Sam And
N-Acetylserotonin
Length = 353
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 15/220 (6%)
Query: 147 WYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNG---VFNEAMSNHSALVMNKILDVYR 203
W HL D + EG + +G+ E R G F +A+ ++ +L +
Sbjct: 117 WGHLADAVREGRNQYLETFGVPAEELFTAIYRSEGERLQFMQALQEVWSVNGRSVLTAFD 176
Query: 204 XXXXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAP---SFPGVEHVG---G 257
+ S YP K FD+P V+ A SF E + G
Sbjct: 177 LSVFPLMCDLGGGAGALAKECM-SLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEG 235
Query: 258 DMFEN-VPRGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQAS 316
D F++ +P D L +LH W D C LL+ + G ++++ES+L E++
Sbjct: 236 DFFKDPLPEADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL---DEDRRG 292
Query: 317 SHIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEI 356
+ L ML QT G+ER+ Y L ++GF +
Sbjct: 293 PLLTQLYSLNMLVQTE-GQERTPTHYHMLLSSAGFRDFQF 331
>pdb|3GWZ|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GWZ|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr
pdb|3GXO|A Chain A, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|D Chain D, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|C Chain C, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
pdb|3GXO|B Chain B, Structure Of The Mitomycin 7-O-Methyltransferase Mmcr With
Bound Mitomycin A
Length = 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 15/214 (7%)
Query: 146 SWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXX 205
+W L + G F A G + ++ DP+ +FN A + S ++ Y
Sbjct: 142 AWEQLTHSVRTGEASFDVANGTSFWQLTHEDPKARELFNRAXGSVSLTEAGQVAAAYDFS 201
Query: 206 XXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSF-------PGVEHVGGD 258
++ + +P ++G + P V A E + GD
Sbjct: 202 GAATAVDIGGGRGSLXAAVLDA-FPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGD 260
Query: 259 MFENVPRG-DAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQASS 317
FE +P G D +K +LH W D+ +++L+ A + +++++++ L+ E A+S
Sbjct: 261 FFETIPDGADVYLIKHVLHDWDDDDVVRILRRIATAXKPDSRLLVIDN---LIDERPAAS 317
Query: 318 HIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGF 351
+ + +L GG ERS+ E+ AL + SG
Sbjct: 318 TLFVDL---LLLVLVGGAERSESEFAALLEKSGL 348
>pdb|1TW2|A Chain A, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW2|B Chain B, Crystal Structure Of Carminomycin-4-O-Methyltransferase
(Dnrk) In Complex With S-Adenosyl-L-Homocystein (Sah)
And 4-Methoxy-E-Rhodomycin T (M-Et)
pdb|1TW3|A Chain A, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
pdb|1TW3|B Chain B, Crystal Structure Of Carminomycin-4-o-methyltransferase
(dnrk) In Complex With S-adenosyl-l-homocystein (sah)
And 4-methoxy-e-rhodomycin T (m-et)
Length = 360
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 88/219 (40%), Gaps = 13/219 (5%)
Query: 146 SWYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXX 205
S+ L D I G + YG +E L P F+ ++ + + Y
Sbjct: 123 SFTRLPDAIRTGRPTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAFDAPAAAY-DW 181
Query: 206 XXXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLPHVLANAPSF-------PGVEHVGGD 258
I R P + ++ + A S+ V+ V GD
Sbjct: 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGD 241
Query: 259 MFENVPR-GDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQASS 317
FE +PR DAI L ++L W D +++L C EAL G+++I E + EN +
Sbjct: 242 FFEPLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER--DDLHENSFNE 299
Query: 318 HIVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFSGLEI 356
E DL ML GG R++++++ LA ++G E+
Sbjct: 300 QFT-ELDLRMLV-FLGGALRTREKWDGLAASAGLVVEEV 336
>pdb|3I53|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I53|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah)
pdb|3I58|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I58|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
2-Hydroxy-7-Methoxy-5-Methyl Naphthoic Acid (Na)
pdb|3I5U|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I5U|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosylmethionine (Sam) And 2-Hydroxy-5-Methyl
Naphthoic Acid (Mna)
pdb|3I64|A Chain A, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
pdb|3I64|B Chain B, Crystal Structure Of An O-Methyltransferase (Ncsb1) From
Neocarzinostatin Biosynthesis In Complex With
S-Adenosyl-L- Homocysteine (Sah) And
1,4-Dihydroxy-2-Naphthoic Acid (Dhn)
Length = 332
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 81/201 (40%), Gaps = 19/201 (9%)
Query: 160 PFRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXXXXXXXXXXXXXXXX 219
P R YG + +E LG+DP + F+ MS+H L I Y
Sbjct: 125 PVR--YGTSFWEDLGSDPVLSASFDTLMSHHLELDYTGIAAKYDWAALGHVVDVGGGSGG 182
Query: 220 XXXXMITSRYPCIKGISFDLPHVLANA------PSFPG-VEHVGGDMFENVPRGDAIF-L 271
++T+ + + G DL + A G + V G F+ +P G + L
Sbjct: 183 LLSALLTA-HEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAGAGGYVL 241
Query: 272 KWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQASSHIVFEQDLFMLAQT 331
+LH W D + +L+ C EA G V+++E++ H DL ML
Sbjct: 242 SAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAV-------AGDEHAGTGMDLRMLTY- 293
Query: 332 TGGRERSKKEYEALAKNSGFS 352
GG+ERS E LA +G +
Sbjct: 294 FGGKERSLAELGELAAQAGLA 314
>pdb|1QZZ|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Methionine (Sam)
pdb|1R00|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adensyl-L-Homocystein (Sah)
Length = 374
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 123/334 (36%), Gaps = 41/334 (12%)
Query: 31 VLPMVLKSAIELNVIDXXXXXXXXEDGHGELLSASKIAARLPTKNPDAPFLLDRMLSLLA 90
V PM L+ A L ++D LL+ + A L + P L R++ L
Sbjct: 28 VTPMALRVAATLRLVD-------------HLLAGADTLAGLADRTDTHPQALSRLVRHLT 74
Query: 91 SYDILRCSLQNGDNGQVERV----YGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMES 146
+L + G + R+ P + + D +G+V+ H D F
Sbjct: 75 VVGVLEGGEKQGRPLRPTRLGMLLADGHPAQQ---RAWLDLNGAVS-----HADLAFT-- 124
Query: 147 WYHLKDVILEGGIPFRRAYGMTQFEYLGTDPRFNGVFNEAMSNHSALVMNKILDVYRXXX 206
L DV+ G + YG +E L D F+ MS L D Y
Sbjct: 125 --GLLDVVRTGRPAYAGRYGRPFWEDLSADVALADSFDALMSCDEDLAYEAPADAY-DWS 181
Query: 207 XXXXXXXXXXXXXXXXXMITSRYPCIKGISFDLP-------HVLANAPSFPGVEHVGGDM 259
I R P ++G +L A+A V GD
Sbjct: 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDF 241
Query: 260 FENVP-RGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQASSH 318
F+ +P D + L ++L W+DE L +L+ C AL G++++++ V + A
Sbjct: 242 FKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA--DVEGDGADRF 299
Query: 319 IVFEQDLFMLAQTTGGRERSKKEYEALAKNSGFS 352
DL ML GGR R++ E LA ++G +
Sbjct: 300 FSTLLDLRML-TFMGGRVRTRDEVVDLAGSAGLA 332
>pdb|1XDS|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDS|B Chain B, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With S-Adenosyl-L-Methionine (Sam) And
11-Deoxy- Beta-Rhodomycin (Dbra)
pdb|1XDU|A Chain A, Crystal Structure Of Aclacinomycin-10-Hydroxylase (Rdmb)
In Complex With Sinefungin (Sfg)
Length = 374
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 257 GDMFENVP-RGDAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESILPLVPENQA 315
GD F+ +P D + L ++L W+DE L +L+ C AL G++++++ + +
Sbjct: 239 GDFFKPLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA-----DVEG 293
Query: 316 SSHIVFEQDLFMLAQTT--GGRERSKKEYEALAKNSGFS 352
F L L T GGR R++ E LA ++G +
Sbjct: 294 DGADRFFSTLLDLRXLTFXGGRVRTRDEVVDLAGSAGLA 332
>pdb|2R3S|A Chain A, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
pdb|2R3S|B Chain B, Crystal Structure Of A Putative O-methyltransferase
(npun_r0239) From Nostoc Punctiforme Pcc 73102 At 2.15 A
Resolution
Length = 335
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 32/132 (24%)
Query: 225 ITSRYPCIKGISFDLPHVLANAPSFPGVEHVGGDMFENVPRGDAIFLKWMLHGWTDEHCL 284
+ SRY I G +F++ + G D D + L LH + C
Sbjct: 213 VASRYHTIAGSAFEVDY--------------GNDY-------DLVLLPNFLHHFDVATCE 251
Query: 285 KLLKNCWEALPENGKVIIVESILP----LVPENQASSHIVFEQDLFMLAQTTGGRERSKK 340
+LL+ AL GKVI+ + +P + P + A+ +V LA T G +
Sbjct: 252 QLLRKIKTALAVEGKVIVFD-FIPNSDRITPPDAAAFSLV------XLATTPNGDAYTFA 304
Query: 341 EYEALAKNSGFS 352
EYE+ N+GFS
Sbjct: 305 EYESXFSNAGFS 316
>pdb|2EX4|A Chain A, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
pdb|2EX4|B Chain B, Crystal Structure Of Human Methyltransferase Ad-003 In
Complex With S-adenosyl-l-homocysteine
Length = 241
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 26/40 (65%)
Query: 267 DAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVESI 306
D I+++W++ TD+H + L+ C +L NG ++I +++
Sbjct: 148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187
>pdb|3RD3|A Chain A, Structure Of Pseudomonas Aeruginosa Transcriptional
Regulator Pa2196
pdb|3RD3|B Chain B, Structure Of Pseudomonas Aeruginosa Transcriptional
Regulator Pa2196
Length = 197
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 95 LRCSLQNGDNGQVERVYGAAPICKFLIKNQDDDDGSVAPLFLLHHDKVFMESW 147
+R +L++G +G +ER+ G Q DDGS+AP H + W
Sbjct: 124 MRITLRDGSDGIIERLVGCL--------GQGRDDGSLAPCDARHMASALYQLW 168
>pdb|1LW3|A Chain A, Crystal Structure Of Myotubularin-Related Protein 2
Complexed With Phosphate
pdb|1M7R|A Chain A, Crystal Structure Of Myotubularin-Related Protein-2
(Mtmr2) Complexed With Phosphate
pdb|1M7R|B Chain B, Crystal Structure Of Myotubularin-Related Protein-2
(Mtmr2) Complexed With Phosphate
Length = 657
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 77 DAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICK------FLIKNQDDDDGS 130
D PF+LD L ++ + + + G+N YG +CK F K + S
Sbjct: 123 DPPFVLDASLGVINRVEKIGGASSRGENS-----YGLETVCKDIRNLRFAHKPEGRTRRS 177
Query: 131 V--------------APLFLLHHDKVFMESWYHLKDVILE---GGIP 160
+ PLF + +VF E+ + L D +LE GIP
Sbjct: 178 IFENLMKYAFPVSNNLPLFAFEYKEVFPENGWKLYDPLLEYRRQGIP 224
>pdb|1XTP|A Chain A, Structural Analysis Of Leishmania Major Lmaj004091aaa, A
Sam-dependent Methyltransferase Of The Duf858/pfam05891
Family
Length = 254
Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 267 DAIFLKWMLHGWTDEHCLKLLKNCWEALPENGKVIIVES 305
D I ++W TD +K K+C +AL NG + E+
Sbjct: 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198
>pdb|1ZSQ|A Chain A, Crystal Structure Of Mtmr2 In Complex With
Phosphatidylinositol 3-Phosphate
pdb|1ZVR|A Chain A, Crystal Structure Of Mtmr2 In Complex With
Phosphatidylinositol 3,5-Bisphosphate
Length = 528
Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 28/107 (26%)
Query: 77 DAPFLLDRMLSLLASYDILRCSLQNGDNGQVERVYGAAPICK------FLIKNQDDDDGS 130
D PF+LD L ++ + + + G+N YG +CK F K + S
Sbjct: 51 DPPFVLDASLGVINRVEKIGGASSRGENS-----YGLETVCKDIRNLRFAHKPEGRTRRS 105
Query: 131 V--------------APLFLLHHDKVFMESWYHLKDVILE---GGIP 160
+ PLF + +VF E+ + L D +LE GIP
Sbjct: 106 IFENLMKYAFPVSNNLPLFAFEYKEVFPENGWKLYDPLLEYRRQGIP 152
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,749,257
Number of Sequences: 62578
Number of extensions: 432624
Number of successful extensions: 960
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 904
Number of HSP's gapped (non-prelim): 28
length of query: 370
length of database: 14,973,337
effective HSP length: 100
effective length of query: 270
effective length of database: 8,715,537
effective search space: 2353194990
effective search space used: 2353194990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)