Your job contains 1 sequence.
>017496
MADSLLGPSISFTFTLTFTRHLLFEKRKIRPRCSSRKSLTKSMSAATHCRCFSNPTHTQP
SLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRL
SDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQ
NEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTND
RLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLH
EVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALL
FFYDNIDHLF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017496
(370 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2055455 - symbol:MEE18 "AT2G34090" species:370... 1151 7.9e-117 1
CGD|CAL0000122 - symbol:orf19.6905 species:5476 "Candida ... 409 6.0e-48 2
UNIPROTKB|Q59S47 - symbol:CaO19.6905 "Putative uncharacte... 409 6.0e-48 2
SGD|S000004956 - symbol:YNL011C "Putative protein of unkn... 384 2.0e-43 2
UNIPROTKB|Q81X60 - symbol:BAS5003 "Uncharacterized protei... 106 2.0e-07 2
TIGR_CMR|BA_5383 - symbol:BA_5383 "conserved hypothetical... 106 2.0e-07 2
UNIPROTKB|Q3AFD9 - symbol:CHY_0273 "Putative uncharacteri... 108 8.7e-07 2
TIGR_CMR|CHY_0273 - symbol:CHY_0273 "conserved hypothetic... 108 8.7e-07 2
UNIPROTKB|Q71WV4 - symbol:LMOf2365_2446 "Putative unchara... 91 0.00014 2
>TAIR|locus:2055455 [details] [associations]
symbol:MEE18 "AT2G34090" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0048868 "pollen tube
development" evidence=IMP] EMBL:CP002685 GO:GO:0009793
InterPro:IPR002882 Pfam:PF01933 GO:GO:0048868 OMA:RVFYMSS
IPI:IPI00528820 RefSeq:NP_973595.1 UniGene:At.37857
ProteinModelPortal:F4IGV3 SMR:F4IGV3 EnsemblPlants:AT2G34090.2
GeneID:817970 KEGG:ath:AT2G34090 PhylomeDB:F4IGV3 Uniprot:F4IGV3
Length = 471
Score = 1151 (410.2 bits), Expect = 7.9e-117, P = 7.9e-117
Identities = 225/293 (76%), Positives = 243/293 (82%)
Query: 44 SAATHCRCFSNPTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVR 103
S + C S+ T PSLLVFSGGT FNGVVEELK +TTRVAHVLPVSDDGGSTAEIVR
Sbjct: 36 STSLMAECLSSSTVEPPSLLVFSGGTGFNGVVEELKKLTTRVAHVLPVSDDGGSTAEIVR 95
Query: 104 VLGGPAVGDIRSRCLRLSDESTPEALAVXXXXXXXXXXXXQQAKSEWYNIVEGEHSLWKG 163
VLGGPAVGDIRSRCLRLSDEST EALAV QAK +WY+IVEG HSLW G
Sbjct: 96 VLGGPAVGDIRSRCLRLSDESTSEALAVRRLLGHRLPIDAHQAKKDWYDIVEGNHSLWDG 155
Query: 164 VSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRV 223
VS+PY ETIRAFL YFQNEI RRPNE FCFSNGSIGNFFFAGAR+FFQSLDAAIFLFSRV
Sbjct: 156 VSRPYSETIRAFLIYFQNEIHRRPNERFCFSNGSIGNFFFAGARIFFQSLDAAIFLFSRV 215
Query: 224 SDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPS 283
S+IP +S VLPVISTNDRLTLGCEL DGT+IRGQNEISHPT G+ + V K + ALPS
Sbjct: 216 SEIPCDSLVLPVISTNDRLTLGCELQDGTIIRGQNEISHPTTGTTQTVDKRHCSTSALPS 275
Query: 284 RIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
+IKRVFYMSSEG+NLLHEVFP N VL+QL +VDCI+YAMGSLFTSICPSLV
Sbjct: 276 KIKRVFYMSSEGNNLLHEVFPPVNPTVLEQLRSVDCIVYAMGSLFTSICPSLV 328
>CGD|CAL0000122 [details] [associations]
symbol:orf19.6905 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000122 eggNOG:COG0391 InterPro:IPR002882 Pfam:PF01933
EMBL:AACQ01000156 RefSeq:XP_712477.1 RefSeq:XP_888748.1
STRING:Q59S47 GeneID:3645906 GeneID:3704150 KEGG:cal:CaO19.6905
KEGG:cal:CaO19_6905 Uniprot:Q59S47
Length = 477
Score = 409 (149.0 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 92/234 (39%), Positives = 137/234 (58%)
Query: 60 PS-LLVFSGGTAFNGVVEELKNIT--TRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
PS + + SGGTA N +V K ++ ++++LP+SD+GGST+EI+RV+GGPA+GDIRSR
Sbjct: 2 PSKITILSGGTATNQLVPLFKRLSPNNNISYILPISDNGGSTSEIIRVIGGPAIGDIRSR 61
Query: 117 CLRLSDESTPEALAVXXXXXXXXXXXXQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFL 176
RL S E+L + AK +W IVEG H LW G++ +E RAF
Sbjct: 62 LTRLIP-SHQESLR--KLLSFRLSSDAKVAKQQWNEIVEGTHELWIGINSSTKEIFRAFF 118
Query: 177 SYFQNEILRRP-------NESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSE 229
+ E+L+R N+ F + ++GN F GAR+F SLD+AI LF +++DI
Sbjct: 119 VHLHVELLKRSRHQISNKNKQFRYEMANVGNLFLTGARLFIGSLDSAIELFCKLTDIDPS 178
Query: 230 SQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSME---PVKKERSAVPA 280
+VLP I+TN + L +G +I GQ++ISHP++ + P+ K R P+
Sbjct: 179 IEVLPCINTNFTYHISAILENGLIITGQSQISHPSDNHEKYPPPIHKTRPPTPS 232
Score = 109 (43.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 259 EISHPT-NGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAV 317
+ +HP S K + P L S IKR+FY+S G E+ PTA+ V +
Sbjct: 289 QYTHPELKKSQLHFSKSDNIEPLL-SPIKRIFYVSPYGE----EICPTAHGKVASTIANT 343
Query: 318 DCIIYAMGSLFTSICPSLV 336
D +IY++GSL TSI P ++
Sbjct: 344 DALIYSIGSLMTSIVPIII 362
>UNIPROTKB|Q59S47 [details] [associations]
symbol:CaO19.6905 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0000122 eggNOG:COG0391 InterPro:IPR002882 Pfam:PF01933
EMBL:AACQ01000156 RefSeq:XP_712477.1 RefSeq:XP_888748.1
STRING:Q59S47 GeneID:3645906 GeneID:3704150 KEGG:cal:CaO19.6905
KEGG:cal:CaO19_6905 Uniprot:Q59S47
Length = 477
Score = 409 (149.0 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 92/234 (39%), Positives = 137/234 (58%)
Query: 60 PS-LLVFSGGTAFNGVVEELKNIT--TRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
PS + + SGGTA N +V K ++ ++++LP+SD+GGST+EI+RV+GGPA+GDIRSR
Sbjct: 2 PSKITILSGGTATNQLVPLFKRLSPNNNISYILPISDNGGSTSEIIRVIGGPAIGDIRSR 61
Query: 117 CLRLSDESTPEALAVXXXXXXXXXXXXQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFL 176
RL S E+L + AK +W IVEG H LW G++ +E RAF
Sbjct: 62 LTRLIP-SHQESLR--KLLSFRLSSDAKVAKQQWNEIVEGTHELWIGINSSTKEIFRAFF 118
Query: 177 SYFQNEILRRP-------NESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSE 229
+ E+L+R N+ F + ++GN F GAR+F SLD+AI LF +++DI
Sbjct: 119 VHLHVELLKRSRHQISNKNKQFRYEMANVGNLFLTGARLFIGSLDSAIELFCKLTDIDPS 178
Query: 230 SQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSME---PVKKERSAVPA 280
+VLP I+TN + L +G +I GQ++ISHP++ + P+ K R P+
Sbjct: 179 IEVLPCINTNFTYHISAILENGLIITGQSQISHPSDNHEKYPPPIHKTRPPTPS 232
Score = 109 (43.4 bits), Expect = 6.0e-48, Sum P(2) = 6.0e-48
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 259 EISHPT-NGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAV 317
+ +HP S K + P L S IKR+FY+S G E+ PTA+ V +
Sbjct: 289 QYTHPELKKSQLHFSKSDNIEPLL-SPIKRIFYVSPYGE----EICPTAHGKVASTIANT 343
Query: 318 DCIIYAMGSLFTSICPSLV 336
D +IY++GSL TSI P ++
Sbjct: 344 DALIYSIGSLMTSIVPIII 362
>SGD|S000004956 [details] [associations]
symbol:YNL011C "Putative protein of unknown function"
species:4932 "Saccharomyces cerevisiae" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
SGD:S000004956 EMBL:BK006947 eggNOG:COG0391 InterPro:IPR002882
Pfam:PF01933 EMBL:Z71287 PIR:S62923 RefSeq:NP_014387.1
ProteinModelPortal:P53980 DIP:DIP-2805N IntAct:P53980 STRING:P53980
PaxDb:P53980 EnsemblFungi:YNL011C GeneID:855721 KEGG:sce:YNL011C
CYGD:YNL011c HOGENOM:HOG000176669 OMA:RVFYMSS OrthoDB:EOG4ZKNWM
NextBio:980084 Genevestigator:P53980 GermOnline:YNL011C
Uniprot:P53980
Length = 444
Score = 384 (140.2 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 88/211 (41%), Positives = 123/211 (58%)
Query: 61 SLLVFSGGTAFNGVVEELKNITTRVAH----VLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
+++V SGGTA N + NI+ H +LP+SD+GGST+EI+R++GGPA+GDIRSR
Sbjct: 2 NVVVCSGGTATNSLTPCFSNISILKGHELTYILPISDNGGSTSEILRIVGGPAIGDIRSR 61
Query: 117 CLRL-SDESTPEALAVXXXXXXXXXXXXQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAF 175
+RL DE E AK EW IVEG H +WK +S +E R+F
Sbjct: 62 IVRLLQDEQLVELFGHRLPNDKLL------AKKEWNEIVEGSHPIWKNISIEVKEMCRSF 115
Query: 176 LSYFQNEILRRPNES--FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVL 233
+ + Q E+L++ S F F + SIGNFF GAR+F SLDA+I L R+ V+
Sbjct: 116 IIHMQAELLKKIKHSNPFQFESASIGNFFLTGARLFLGSLDASIELMMRIGRCSPLVHVI 175
Query: 234 PVISTNDRLTLGCELGDGTVIRGQNEISHPT 264
P I+TN + L +G +I GQ++ISHP+
Sbjct: 176 PCINTNHTHHISALLTNGEMITGQSQISHPS 206
Score = 91 (37.1 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 281 LPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
LP+ + R+ Y++ G E+ P N + ++ D ++Y++GSL TS+ P L+
Sbjct: 273 LPAPVHRILYINPYGE----EIKPMGNPRAISKVKKADMVVYSIGSLMTSLLPILI 324
>UNIPROTKB|Q81X60 [details] [associations]
symbol:BAS5003 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR InterPro:IPR002882 Pfam:PF01933
InterPro:IPR010119 TIGRFAMs:TIGR01826 HOGENOM:HOG000072685
RefSeq:NP_847556.1 RefSeq:YP_022042.1 RefSeq:YP_031242.1
ProteinModelPortal:Q81X60 SMR:Q81X60 DNASU:1084929
EnsemblBacteria:EBBACT00000009847 EnsemblBacteria:EBBACT00000017931
EnsemblBacteria:EBBACT00000023358 GeneID:1084929 GeneID:2816733
GeneID:2849248 KEGG:ban:BA_5383 KEGG:bar:GBAA_5383 KEGG:bat:BAS5003
OMA:ERFTENN ProtClustDB:CLSK2391403
BioCyc:BANT260799:GJAJ-5078-MONOMER
BioCyc:BANT261594:GJ7F-5254-MONOMER Uniprot:Q81X60
Length = 317
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCL 118
+P +++ GGT + ++ LK + V+ ++DDGGS+ + L P GDIR+ +
Sbjct: 6 KPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDIRNVLV 65
Query: 119 RLSD-ESTPEAL 129
LSD E EAL
Sbjct: 66 ALSDVEPLVEAL 77
Score = 81 (33.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 257 QNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNA 316
Q+ + H E V E S +P +I RVF ++ E LHE L ++
Sbjct: 131 QSAVLHAELEDGEIVTGE-SKIPYFGKKINRVF-LTPEDVEPLHET--------LTEIKR 180
Query: 317 VDCIIYAMGSLFTSICPSLV 336
D +++ GSL+TSI P+LV
Sbjct: 181 ADLLVFGPGSLYTSILPNLV 200
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 197 SIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRG 256
++GN AG AI S+V ++ +VLP + N L EL DG ++ G
Sbjct: 92 ALGNLLLAGMTSITGDFFHAITETSKVLNV--RGRVLP--AANQSAVLHAELEDGEIVTG 147
Query: 257 QNEISH 262
+++I +
Sbjct: 148 ESKIPY 153
>TIGR_CMR|BA_5383 [details] [associations]
symbol:BA_5383 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR002882 Pfam:PF01933 InterPro:IPR010119
TIGRFAMs:TIGR01826 HOGENOM:HOG000072685 RefSeq:NP_847556.1
RefSeq:YP_022042.1 RefSeq:YP_031242.1 ProteinModelPortal:Q81X60
SMR:Q81X60 DNASU:1084929 EnsemblBacteria:EBBACT00000009847
EnsemblBacteria:EBBACT00000017931 EnsemblBacteria:EBBACT00000023358
GeneID:1084929 GeneID:2816733 GeneID:2849248 KEGG:ban:BA_5383
KEGG:bar:GBAA_5383 KEGG:bat:BAS5003 OMA:ERFTENN
ProtClustDB:CLSK2391403 BioCyc:BANT260799:GJAJ-5078-MONOMER
BioCyc:BANT261594:GJ7F-5254-MONOMER Uniprot:Q81X60
Length = 317
Score = 106 (42.4 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCL 118
+P +++ GGT + ++ LK + V+ ++DDGGS+ + L P GDIR+ +
Sbjct: 6 KPKIVIMGGGTGLSVLLRGLKQYPVDITAVVTIADDGGSSGRLRDELEIPPPGDIRNVLV 65
Query: 119 RLSD-ESTPEAL 129
LSD E EAL
Sbjct: 66 ALSDVEPLVEAL 77
Score = 81 (33.6 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 26/80 (32%), Positives = 39/80 (48%)
Query: 257 QNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNA 316
Q+ + H E V E S +P +I RVF ++ E LHE L ++
Sbjct: 131 QSAVLHAELEDGEIVTGE-SKIPYFGKKINRVF-LTPEDVEPLHET--------LTEIKR 180
Query: 317 VDCIIYAMGSLFTSICPSLV 336
D +++ GSL+TSI P+LV
Sbjct: 181 ADLLVFGPGSLYTSILPNLV 200
Score = 64 (27.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 197 SIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRG 256
++GN AG AI S+V ++ +VLP + N L EL DG ++ G
Sbjct: 92 ALGNLLLAGMTSITGDFFHAITETSKVLNV--RGRVLP--AANQSAVLHAELEDGEIVTG 147
Query: 257 QNEISH 262
+++I +
Sbjct: 148 ESKIPY 153
>UNIPROTKB|Q3AFD9 [details] [associations]
symbol:CHY_0273 "Putative uncharacterized protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0391
InterPro:IPR002882 Pfam:PF01933 InterPro:IPR010119
TIGRFAMs:TIGR01826 RefSeq:YP_359145.1 ProteinModelPortal:Q3AFD9
STRING:Q3AFD9 GeneID:3726657 KEGG:chy:CHY_0273 PATRIC:21273719
HOGENOM:HOG000072685 OMA:HAVTEMS BioCyc:CHYD246194:GJCN-274-MONOMER
Uniprot:Q3AFD9
Length = 408
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT ++ LK+ T+ + ++ V+DDGGS+ + +G GD+R+ +
Sbjct: 92 PKIAVIGGGTGLATLLRGLKHYTSNITAIVTVADDGGSSGRLREEMGMLPPGDLRNCLVA 151
Query: 120 LSD-ESTPEAL 129
L+D ES E+L
Sbjct: 152 LADKESLMESL 162
Score = 76 (31.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 30/72 (41%), Positives = 38/72 (52%)
Query: 265 NGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCIIYAM 324
NG E V + R A+P IKRV Y+ G+ L EV A+L+ D II
Sbjct: 225 NGD-EVVGESRFREVAVP--IKRV-YLHPPGAKTLPEV----EKALLE----ADLIILGP 272
Query: 325 GSLFTSICPSLV 336
GSLFTSI P+L+
Sbjct: 273 GSLFTSIIPNLL 284
>TIGR_CMR|CHY_0273 [details] [associations]
symbol:CHY_0273 "conserved hypothetical protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0391
InterPro:IPR002882 Pfam:PF01933 InterPro:IPR010119
TIGRFAMs:TIGR01826 RefSeq:YP_359145.1 ProteinModelPortal:Q3AFD9
STRING:Q3AFD9 GeneID:3726657 KEGG:chy:CHY_0273 PATRIC:21273719
HOGENOM:HOG000072685 OMA:HAVTEMS BioCyc:CHYD246194:GJCN-274-MONOMER
Uniprot:Q3AFD9
Length = 408
Score = 108 (43.1 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 24/71 (33%), Positives = 41/71 (57%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT ++ LK+ T+ + ++ V+DDGGS+ + +G GD+R+ +
Sbjct: 92 PKIAVIGGGTGLATLLRGLKHYTSNITAIVTVADDGGSSGRLREEMGMLPPGDLRNCLVA 151
Query: 120 LSD-ESTPEAL 129
L+D ES E+L
Sbjct: 152 LADKESLMESL 162
Score = 76 (31.8 bits), Expect = 8.7e-07, Sum P(2) = 8.7e-07
Identities = 30/72 (41%), Positives = 38/72 (52%)
Query: 265 NGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCIIYAM 324
NG E V + R A+P IKRV Y+ G+ L EV A+L+ D II
Sbjct: 225 NGD-EVVGESRFREVAVP--IKRV-YLHPPGAKTLPEV----EKALLE----ADLIILGP 272
Query: 325 GSLFTSICPSLV 336
GSLFTSI P+L+
Sbjct: 273 GSLFTSIIPNLL 284
>UNIPROTKB|Q71WV4 [details] [associations]
symbol:LMOf2365_2446 "Putative uncharacterized protein"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE017262 GenomeReviews:AE017262_GR eggNOG:COG0391
InterPro:IPR002882 Pfam:PF01933 InterPro:IPR010119
TIGRFAMs:TIGR01826 HOGENOM:HOG000072685 OMA:HAVTEMS
RefSeq:YP_015034.1 ProteinModelPortal:Q71WV4 STRING:Q71WV4
GeneID:2799889 KEGG:lmf:LMOf2365_2446 PATRIC:20326261
ProtClustDB:CLSK564951 Uniprot:Q71WV4
Length = 322
Score = 91 (37.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCL 118
+P ++V GGT +++ LK + ++ V+DDGGS+ +I + GDIR+ L
Sbjct: 6 KPKVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNVML 65
Query: 119 RLSD 122
LS+
Sbjct: 66 ALSN 69
Score = 70 (29.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 25/74 (33%), Positives = 36/74 (48%)
Query: 265 NGSMEP--VKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCIIY 322
N ME + S +P I RV+ E N+ + +PTA AV + D I+
Sbjct: 136 NAEMEDGSIVHGESLIPLQGKHINRVYI---EPENV--KPYPTAVEAVKE----ADLIVI 186
Query: 323 AMGSLFTSICPSLV 336
GSL+TSI P+L+
Sbjct: 187 GPGSLYTSILPNLL 200
Score = 62 (26.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 198 IGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQ 257
IGN S AI + + V I +V+P +T+ L L E+ DG+++ G+
Sbjct: 93 IGNLILTALSQLNDSYVDAINVLATVLKI--RGKVIP--ATDQPLILNAEMEDGSIVHGE 148
Query: 258 NEISHPTNGS-MEPVKKERSAVPALPSRIKRV 288
+ I P G + V E V P+ ++ V
Sbjct: 149 SLI--PLQGKHINRVYIEPENVKPYPTAVEAV 178
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 370 345 0.00097 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 611 (65 KB)
Total size of DFA: 229 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.01u 0.16s 26.17t Elapsed: 00:00:01
Total cpu time: 26.01u 0.17s 26.18t Elapsed: 00:00:01
Start: Sat May 11 15:18:07 2013 End: Sat May 11 15:18:08 2013