BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017496
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53980|YNB1_YEAST Uncharacterized protein YNL011C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YNL011C PE=1 SV=1
Length = 444
Score = 173 bits (438), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 164/330 (49%), Gaps = 61/330 (18%)
Query: 61 SLLVFSGGTAFNGVVEELKNITTRVAH----VLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
+++V SGGTA N + NI+ H +LP+SD+GGST+EI+R++GGPA+GDIRSR
Sbjct: 2 NVVVCSGGTATNSLTPCFSNISILKGHELTYILPISDNGGSTSEILRIVGGPAIGDIRSR 61
Query: 117 CLRL-SDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAF 175
+RL DE E L GHRLP AK EW IVEG H +WK +S +E R+F
Sbjct: 62 IVRLLQDEQLVE------LFGHRLPNDKLLAKKEWNEIVEGSHPIWKNISIEVKEMCRSF 115
Query: 176 LSYFQNEILRRPNES--FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVL 233
+ + Q E+L++ S F F + SIGNFF GAR+F SLDA+I L R+ V+
Sbjct: 116 IIHMQAELLKKIKHSNPFQFESASIGNFFLTGARLFLGSLDASIELMMRIGRCSPLVHVI 175
Query: 234 PVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSA---------------- 277
P I+TN + L +G +I GQ++ISHP+ + SA
Sbjct: 176 PCINTNHTHHISALLTNGEMITGQSQISHPSKSVPKDNSIAHSAKFIHLLGSYDDHLKIL 235
Query: 278 ------------------VPALPSRIKRVFYMSSEGSNL---LHEVF----------PTA 306
+P L + + F E NL +H + P
Sbjct: 236 LDDEEEEAEEEYANPIYILPELKNS-QLHFDKLDESQNLPAPVHRILYINPYGEEIKPMG 294
Query: 307 NSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
N + ++ D ++Y++GSL TS+ P L+
Sbjct: 295 NPRAISKVKKADMVVYSIGSLMTSLLPILI 324
>sp|O06974|YVCK_BACSU UPF0052 protein YvcK OS=Bacillus subtilis (strain 168) GN=yvcK PE=3
SV=1
Length = 317
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 106/280 (37%), Gaps = 83/280 (29%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCL 118
+P + +F GGT + ++ LK+ + ++ V+DDGGS+ + L P GDIR+
Sbjct: 4 KPKIAIFGGGTGLSVLLRGLKHKPVDITAIVTVADDGGSSGRLRNELKIPPPGDIRNVLA 63
Query: 119 RLSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSY 178
LSD E L V L HR
Sbjct: 64 ALSDV---EPL-VEDLFQHRF--------------------------------------- 80
Query: 179 FQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
N+ + S+GN A A+ S+V ++ +VLP +
Sbjct: 81 ---------NKGNDLTGHSLGNLILAAMTNITGDFFHAVTEMSKVLNV--RGKVLP--AA 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
N + L E+ DG V+ G+ S +P RIKRVF ++ E +
Sbjct: 128 NASVVLHAEMEDGRVVSGE------------------STIPEYGQRIKRVF-LTPEQIDP 168
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
L E +D + D II GSL+TSI P+L+ P
Sbjct: 169 LPE--------TIDVIREADLIIIGPGSLYTSILPNLLVP 200
>sp|Q9K706|Y3568_BACHD UPF0052 protein BH3568 OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=BH3568
PE=1 SV=1
Length = 322
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 112/280 (40%), Gaps = 83/280 (29%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCL 118
+ +++VF GGT + ++ LK + ++ V+DDGGS+ + + L P GD+R+ +
Sbjct: 3 KKNVVVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLV 62
Query: 119 RLSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSY 178
LS E P + +L HR
Sbjct: 63 ALS-EVEP---LLEQLFQHR---------------------------------------- 78
Query: 179 FQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
F+N S S+GN AG I S+V ++ +VLP ++
Sbjct: 79 FEN--------GNGLSGHSLGNLLLAGMTSITGDFARGISEMSKVLNV--RGKVLP--AS 126
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
N + L E+ DGT++ G+ S++P +IKRVF ++ + +
Sbjct: 127 NRSIILHGEMEDGTIVTGE------------------SSIPKAGKKIKRVF-LTPKDTKP 167
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
L E L+ + D I+ GSL+TS+ P+L+ P
Sbjct: 168 LREG--------LEAIRKADVIVIGPGSLYTSVLPNLLVP 199
>sp|Q97LP2|Y512_CLOAB UPF0052 protein CA_C0512 OS=Clostridium acetobutylicum (strain ATCC
824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787)
GN=CA_C0512 PE=3 SV=1
Length = 451
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 105/277 (37%), Gaps = 80/277 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P ++ GGT + ++ LK T+ + V+ V+DDGG + + LG GDIR+ L
Sbjct: 103 PKIVAIGGGTGLSTMLRGLKYYTSNITAVVTVADDGGGSGALREDLGILPPGDIRNCILA 162
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
LSD ++P E + + F
Sbjct: 163 LSD------------------------------------------TEPLMEDLLQY--RF 178
Query: 180 QNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTN 239
++ R N+SF GN F A + + A+ S V + +VLPV T
Sbjct: 179 KDG--RLKNQSF-------GNLFLAAMDGISTNFEEAVHKMSSV--LAVTGKVLPV--TL 225
Query: 240 DRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLL 299
D + L +L +G V+ G++ I P++K ++ E + L
Sbjct: 226 DNVVLKAKLKNGVVVEGESNIPEQAILYESPIEK---------------IFIEPENARAL 270
Query: 300 HEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
HE A D +I GSLFTS+ P+L+
Sbjct: 271 HETVQAIKEA--------DAVILGPGSLFTSVIPNLL 299
>sp|P38541|YAMB_THETU UPF0052 protein in amyB 5'region OS=Thermoanaerobacter
thermosulfurogenes PE=3 SV=1
Length = 323
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 109/277 (39%), Gaps = 80/277 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P ++V GGT + ++ LK T + ++ V+DDGG + + LG GDIR+ C+
Sbjct: 10 PKVVVIGGGTGLSTMLRGLKKYTHNITAIVTVADDGGGSGVLREDLGMLPPGDIRN-CI- 67
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
LA+R P K Y +G + KG
Sbjct: 68 ---------LALRN-------TEPTMEKLLQYRFTDG---MLKG---------------- 92
Query: 180 QNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTN 239
+SF GN F A S + A+ S V + +VLPV T
Sbjct: 93 ---------QSF-------GNLFLAAMNGISISFEEAVKKMSEV--LAVSGKVLPV--TL 132
Query: 240 DRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLL 299
D + L +L +G VI G+ S+ P + + P I+R+F +
Sbjct: 133 DDVKLKAKLKNGIVIDGE---------SLIPKLQMKEKSP-----IERIFLEPKDAK--- 175
Query: 300 HEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
A++D ++A D II GSL+TSI P+L+
Sbjct: 176 -----PVKEALIDIMDA-DEIILGPGSLYTSIIPNLL 206
>sp|Q55575|Y154_SYNY3 UPF0052 protein sll0154 OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=sll0154 PE=3 SV=1
Length = 462
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 59/146 (40%), Gaps = 31/146 (21%)
Query: 193 FSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGT 252
S S GN F L+ A S+V + +VLP +T D + L E+ DG
Sbjct: 228 LSGHSFGNLFLTAMAEITGDLEMAAIACSKV--LAVRGKVLP--ATLDDVKLWAEMEDGR 283
Query: 253 VIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLD 312
+ G+ S +P RI+R+ + P A AVL
Sbjct: 284 YVEGE------------------SNIPEAQGRIRRIGCLPES---------PKALPAVLK 316
Query: 313 QLNAVDCIIYAMGSLFTSICPSLVSP 338
+ A D II GSL+TSI P+L+ P
Sbjct: 317 AIKAADYIIIGPGSLYTSILPNLLIP 342
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 61 SLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRL 120
++V GGT + ++ LK+ + + ++ V+DDGGS+ + R +G GDIR+ L
Sbjct: 148 KIVVVGGGTGLSTLLRGLKHYSANITAIVTVADDGGSSGRLRREMGMLPPGDIRNCIGAL 207
Query: 121 SDE 123
+DE
Sbjct: 208 ADE 210
>sp|Q9X235|Y1709_THEMA UPF0052 protein TM_1709 OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=TM_1709 PE=3 SV=1
Length = 314
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 103/277 (37%), Gaps = 86/277 (31%)
Query: 61 SLLVFSGGTAFNGVVEELKNITT-RVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
++ GGT + +++ LKNI + + V+ V+D+GGS+ ++ + L P GD+R+ +
Sbjct: 2 KVVAVGGGTGLSTLLKGLKNIDSFEITAVVSVTDEGGSSGKLRKELNVPPPGDVRNNIVA 61
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
L+ + LL AK Y EG
Sbjct: 62 LAKDED--------LL----------AKLMSYRFSEG----------------------- 80
Query: 180 QNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTN 239
F S+GN A S AI + RV I + +VLPV +
Sbjct: 81 ------------SFKGHSLGNLIIAALTKIEGSFSEAIRILERVLAI--KGRVLPVSEDH 126
Query: 240 DRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLL 299
RL E DG + G+ I G + V+ +R + ALP
Sbjct: 127 ARLVARFE--DGEEVIGETNIVR-KGGKIVEVRLDR-PIDALPE---------------- 166
Query: 300 HEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
VL+ + D II+ GSL+TSI +++
Sbjct: 167 ----------VLEAIERADIIIFGPGSLYTSIITNVL 193
>sp|O52750|Y2298_NOSS1 UPF0052 protein alr2298 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=alr2298 PE=3 SV=1
Length = 456
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P ++V GGT + ++ LK + + ++ V+DDGGS+ + + G GDIR+
Sbjct: 137 PKIVVIGGGTGLSTLLRGLKTYSANITAIVTVADDGGSSGRLRQEFGVLPPGDIRNCLAA 196
Query: 120 LSDE 123
L+DE
Sbjct: 197 LADE 200
>sp|Q9RUF1|Y1435_DEIRA UPF0052 protein DR_1435 OS=Deinococcus radiodurans (strain ATCC
13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 /
NCIMB 9279 / R1 / VKM B-1422) GN=DR_1435 PE=3 SV=1
Length = 467
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 25/102 (24%)
Query: 237 STNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGS 296
+T +TL EL DG IRG++ + E ++ PSRI+RV
Sbjct: 266 ATTRPVTLVAELADGRTIRGESRFA-------EQIR---------PSRIERVR------- 302
Query: 297 NLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
L P+A + VL+ + + I+ GSLFTSI P+L+ P
Sbjct: 303 --LEPENPSALTQVLEAVRDAEMIVLGPGSLFTSIIPALLIP 342
Score = 36.2 bits (82), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 62 LLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLS 121
++ GGT + ++ LK ++ + V+ V+DDGGS+ + L A GD+ LS
Sbjct: 148 VVTVGGGTGLSNLLTGLKTHSSNITAVVTVADDGGSSGRLREALDMVAPGDLTDCYAALS 207
Query: 122 DESTPEALAVRRLLGHR 138
E+ A+ RLL HR
Sbjct: 208 -----ESPALARLLLHR 219
>sp|Q97PN8|Y1565_STRPN UPF0052 protein SP_1565 OS=Streptococcus pneumoniae serotype 4
(strain ATCC BAA-334 / TIGR4) GN=SP_1565 PE=1 SV=1
Length = 325
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 83/281 (29%)
Query: 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEI---VRVLGGPAVGDIRS 115
+P + V GGT +++ L+ +A ++ V+DDGGS+ E+ ++ L P GD+R+
Sbjct: 3 KPKITVIGGGTGSPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQQLTPP--GDLRN 60
Query: 116 RCLRLSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAF 175
+ +SD +P ++Y V
Sbjct: 61 VLVAMSD----------------MP--------KFYEKV--------------------- 75
Query: 176 LSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPV 235
FQ R ++ F+ +GN AG S A+ L S+ + ++ P
Sbjct: 76 ---FQ---YRFSEDAGAFAGHPLGNLIIAGLSEMQGSTYNAMQLLSKF--FHTTGKIYP- 126
Query: 236 ISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEG 295
S++ LTL DGT + G++ I R I V+
Sbjct: 127 -SSDHPLTLHAVFQDGTEVAGESHIV-----------DHRGI-------IDNVYV----- 162
Query: 296 SNLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLV 336
+N L++ P A+ V+ + D I+ GSLFTSI P++V
Sbjct: 163 TNALNDDTPLASRRVVQTILESDMIVLGPGSLFTSILPNIV 203
>sp|Q9A0R7|Y653_STRP1 UPF0052 protein SPy_0653/M5005_Spy0540 OS=Streptococcus pyogenes
serotype M1 GN=SPy_0653 PE=3 SV=1
Length = 325
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 104/280 (37%), Gaps = 80/280 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT + +++ L+N + V+ V+DDGGS+ E+ + GD+R+ L
Sbjct: 4 PKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLA 63
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
+SD +P ++
Sbjct: 64 MSD----------------MP------------------------------------KFY 71
Query: 180 QNEILRRPNES-FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
+ R NES + +GN AG S AI + ++ I ++ P S+
Sbjct: 72 ERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT--GKIYP--SS 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
LTL DG + G+ S++ P I V+ +N
Sbjct: 128 EQALTLHAVFKDGHEVAGE------------------SSIAKYPGMIDHVYV-----TNT 164
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
++ P A+ V++ + D I+ GSLFTSI P+LV P
Sbjct: 165 YNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIP 204
>sp|Q928C0|Y2616_LISIN UPF0052 protein lin2616 OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=lin2616 PE=3 SV=1
Length = 322
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
T+P ++V GGT V++ LK + ++ V+DDGGS+ +I + GDIR+
Sbjct: 4 ETKPKVVVIGGGTGLPVVLKGLKKKEIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNV 63
Query: 117 CLRLSD 122
L LS+
Sbjct: 64 MLALSN 69
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 31/142 (21%)
Query: 193 FSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGT 252
S IGN S AI + + V I +V+P +T+ L L E+ DG+
Sbjct: 88 LSGHVIGNLILTALSQLNDSYVDAINVLATVLKI--RGKVIP--ATDQPLILNAEMEDGS 143
Query: 253 VIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLD 312
++ G+ S +P I RVF E N+ + +PTA AV
Sbjct: 144 IVHGE------------------SLIPLQGKHINRVFI---EPENV--KPYPTAVEAV-- 178
Query: 313 QLNAVDCIIYAMGSLFTSICPS 334
D I+ GSL+TSI P+
Sbjct: 179 --KEADLIVIGPGSLYTSILPN 198
>sp|P58588|Y2473_LISMO UPF0052 protein lmo2473 OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=lmo2473 PE=3 SV=1
Length = 322
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
T+P ++V GGT +++ LK + ++ V+DDGGS+ +I + GDIR+
Sbjct: 4 ETKPRVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNV 63
Query: 117 CLRLSD 122
L LS+
Sbjct: 64 MLALSN 69
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 31/144 (21%)
Query: 193 FSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGT 252
S IGN S AI + + V I +V+P +T+ L L E+ DG+
Sbjct: 88 LSGHVIGNLILTALSQLNDSYVDAINVLATVLKI--RGKVIP--ATDQPLILNAEMEDGS 143
Query: 253 VIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHEVFPTANSAVLD 312
++ G+ S +P I RV+ E N+ + +PTA AV
Sbjct: 144 IVHGE------------------SLIPLQGKHINRVYI---EPENV--KPYPTAVEAV-- 178
Query: 313 QLNAVDCIIYAMGSLFTSICPSLV 336
D I+ GSL+TSI P+L+
Sbjct: 179 --KEADLIVIGPGSLYTSILPNLL 200
>sp|Q8P1T7|Y714_STRP8 UPF0052 protein spyM18_0714 OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=spyM18_0714 PE=3 SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 80/280 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT + +++ L+N + V+ V+DDGGS+ E+ + GD+R+ L
Sbjct: 4 PKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLA 63
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
+SD +P ++
Sbjct: 64 MSD----------------MP------------------------------------KFY 71
Query: 180 QNEILRRPNES-FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
+ R NES + +GN AG S AI + ++ I ++ P S+
Sbjct: 72 ERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT--GKIYP--SS 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
LTL DG + G+ S++ I V+ +N
Sbjct: 128 EQALTLHAVFKDGHEVAGE------------------SSIAKYQGMIDHVYV-----TNT 164
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
++ P A+ V++ + D I+ GSLFTSI P+LV P
Sbjct: 165 YNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIP 204
>sp|Q5XD18|Y560_STRP6 UPF0052 protein M6_Spy0560 OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=M6_Spy0560 PE=3
SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 80/280 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT + +++ L+N + V+ V+DDGGS+ E+ + GD+R+ L
Sbjct: 4 PKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLA 63
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
+SD +P ++
Sbjct: 64 MSD----------------MP------------------------------------KFY 71
Query: 180 QNEILRRPNES-FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
+ R NES + +GN AG S AI + ++ I ++ P S+
Sbjct: 72 ERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT--GKIYP--SS 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
LTL DG + G+ S++ I V+ +N
Sbjct: 128 EQALTLHAVFKDGHEVAGE------------------SSIAKYQGMIDHVYV-----TNT 164
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
++ P A+ V++ + D I+ GSLFTSI P+LV P
Sbjct: 165 YNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIP 204
>sp|P0DG79|Y463_STRPQ UPF0052 protein SPs1392 OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=SPs1392 PE=3 SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 80/280 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT + +++ L+N + V+ V+DDGGS+ E+ + GD+R+ L
Sbjct: 4 PKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLA 63
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
+SD +P ++
Sbjct: 64 MSD----------------MP------------------------------------KFY 71
Query: 180 QNEILRRPNES-FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
+ R NES + +GN AG S AI + ++ I ++ P S+
Sbjct: 72 ERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT--GKIYP--SS 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
LTL DG + G+ S++ I V+ +N
Sbjct: 128 EQALTLHAVFKDGHEVAGE------------------SSIAKYQGMIDHVYV-----TNT 164
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
++ P A+ V++ + D I+ GSLFTSI P+LV P
Sbjct: 165 YNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIP 204
>sp|P0DG78|Y463_STRP3 UPF0052 protein SpyM3_0463 OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=SpyM3_0463 PE=3 SV=1
Length = 325
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 80/280 (28%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
P + V GGT + +++ L+N + V+ V+DDGGS+ E+ + GD+R+ L
Sbjct: 4 PKMTVIGGGTGISIILKSLRNEAVDITAVVTVADDGGSSGELRNAMQLAPPGDLRNVLLA 63
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
+SD +P ++
Sbjct: 64 MSD----------------MP------------------------------------KFY 71
Query: 180 QNEILRRPNES-FCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVIST 238
+ R NES + +GN AG S AI + ++ I ++ P S+
Sbjct: 72 ERVFQYRFNESDGALAGHPLGNLIIAGISEMQGSTYNAIQILTKFFHIT--GKIYP--SS 127
Query: 239 NDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNL 298
LTL DG + G+ S++ I V+ +N
Sbjct: 128 EQALTLHAVFKDGHEVAGE------------------SSIAKYQGMIDHVYV-----TNT 164
Query: 299 LHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
++ P A+ V++ + D I+ GSLFTSI P+LV P
Sbjct: 165 YNDQKPQASRKVVEAILESDMIVLGPGSLFTSILPNLVIP 204
>sp|Q9CGY0|YJIF_LACLA UPF0052 protein YjiF OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=yjiF PE=3 SV=1
Length = 327
Score = 38.5 bits (88), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRC 117
+ P ++V GGT V++ L+ + ++ V+DDGGS+ I + GD+R+
Sbjct: 2 SNPKVVVIGGGTGIPVVLKALRKEKIDLTAIVTVADDGGSSGRIRSAVNIAPPGDLRNVL 61
Query: 118 LRLSD 122
+ +SD
Sbjct: 62 IAMSD 66
>sp|O66974|Y778_AQUAE UPF0052 protein aq_778 OS=Aquifex aeolicus (strain VF5) GN=aq_778
PE=3 SV=1
Length = 328
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 61 SLLVFSGGTAFNGVVEELK----NITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSR 116
+++ GGT + ++ LK R++ ++ V+D GGST + ++ PA GDIR+
Sbjct: 5 NVVAIGGGTGLSSLLRGLKIEVGRSIGRLSAIVTVADSGGSTGRLRKIYNIPAPGDIRNC 64
Query: 117 CLRLSD-ESTPEALAVRRLLGHRLPLH 142
+ LSD E + L R G L H
Sbjct: 65 IVALSDAEELMQKLFQYRFKGDGLEGH 91
>sp|Q9CCN9|Y564_MYCLE UPF0052 protein ML0564 OS=Mycobacterium leprae (strain TN)
GN=ML0564 PE=3 SV=1
Length = 359
Score = 36.6 bits (83), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 73/279 (26%)
Query: 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR 119
PS++ GG + + +T V ++ V+DDGGS+ + LG GD+R
Sbjct: 8 PSIVALGGGHGLYVTLSAARRLTPYVTAIVTVADDGGSSGRLRSELGVVPPGDLRMALAA 67
Query: 120 LSDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYF 179
L+ +S PY R + +
Sbjct: 68 LASDS------------------------------------------PYG---RLWATIL 82
Query: 180 QNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTN 239
Q+ R S + IGN AG AA+ R+ + + +VLP+
Sbjct: 83 QH----RFGGSGALAGHPIGNLMLAGLSEVLADPVAALDEVGRILGV--KGRVLPMCP-- 134
Query: 240 DRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLL 299
+ L E D + + I G + A+ + P +++RV +
Sbjct: 135 --IALQIE-ADVSGLEADPRIFRLIRGQV--------AIASTPGKVRRVRLL-------- 175
Query: 300 HEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
V P A +D + A + ++ GS FTS+ P ++ P
Sbjct: 176 -PVDPPATRQAVDAIMAANLVVLGPGSWFTSVIPHVLVP 213
>sp|Q6Z3Y6|GT71_ORYSJ Probable glucuronosyltransferase Os07g0694400 OS=Oryza sativa
subsp. japonica GN=Os07g0694400 PE=2 SV=1
Length = 338
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 183 ILRRP--NESFCFSNGSIGNFFF-------AGARVFFQSLDAAIFLFSRVSDIPSESQVL 233
+LRR + S CF G + AGA VF ++L A+ +FSR S+ P + Q++
Sbjct: 24 VLRRAMLHSSLCFLVGLLAGLAAPSDWPAAAGAAVFLRTLRASNVIFSRSSNRPQQPQLV 83
Query: 234 PVISTNDR 241
V++T ++
Sbjct: 84 VVVTTTEQ 91
>sp|C4KZ18|LIPM_EXISA Octanoyltransferase LipM OS=Exiguobacterium sp. (strain ATCC
BAA-1283 / AT1b) GN=lipM PE=3 SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 37/93 (39%), Gaps = 15/93 (16%)
Query: 131 VRRLLGHRLPLH----------PQQAKSEWYNIVEGEHSLWKGVSKPYRE-----TIRAF 175
VRRL G R LH P+ + NI+E L +GV + YRE
Sbjct: 74 VRRLTGGRAVLHADELTYSVILPESTPALPTNIIESYRLLTEGVRRGYRELGVPAEFSVP 133
Query: 176 LSYFQNEILRRPNESFCFSNGSIGNFFFAGARV 208
L+ E LR+P + CF S G ++
Sbjct: 134 LTEEDREALRKPKSAVCFDAASYYELAVDGKKI 166
>sp|P71691|Y1422_MYCTU UPF0052 protein Rv1422/MT1465 OS=Mycobacterium tuberculosis
GN=Rv1422 PE=1 SV=1
Length = 342
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 75/279 (26%)
Query: 61 SLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRL 120
++ GG + + +T V V+ V+DDGGS+ + L GD+R L
Sbjct: 4 GIVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAAL 63
Query: 121 SDESTPEALAVRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQ 180
+ +S L W I++
Sbjct: 64 ASDSPHGRL--------------------WATILQ------------------------- 78
Query: 181 NEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAIFLFSRVSDIPSESQVLPVISTND 240
R S + IGN AG AA+ R+ + + +VLP+
Sbjct: 79 ----HRFGGSGALAGHPIGNLMLAGLSEVLADPVAALDELGRILGV--KGRVLPM----- 127
Query: 241 RLTLGCELGDGTVIRGQNEISH-PTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLL 299
C + ++ + ++S + M + + + A+ P +++RV + ++
Sbjct: 128 -----CPV----ALQIEADVSGLEADPRMFRLIRGQVAIATTPGKVRRVRLLPTD----- 173
Query: 300 HEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSP 338
P A +D + A D ++ GS FTS+ P ++ P
Sbjct: 174 ----PPATRQAVDAIMAADLVVLGPGSWFTSVIPHVLVP 208
>sp|P12933|DPOL_HBVC3 Protein P OS=Hepatitis B virus genotype C subtype adr (strain
Japan/adr4/1983) GN=P PE=3 SV=2
Length = 843
Score = 34.3 bits (77), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 18/164 (10%)
Query: 140 PLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIG 199
P +P+ A + ++ H+LWK RET R+ SFC S S
Sbjct: 131 PYYPEHAVNHYFKTRHYLHTLWKAGILYKRETTRS--------------ASFCGSPYSWE 176
Query: 200 NFFFAGARVFFQSLDAAIFLF-SRVSDIPSESQVLPVISTN-DRLTLGCELGDGTVIRGQ 257
G VF S F S+ S I S S V P + + + LG + G++ RG+
Sbjct: 177 QELQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCVRSQLTQSRLGLQPQQGSLARGK 236
Query: 258 NEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHE 301
+ S + P + V P+ R+ +S S+ LH+
Sbjct: 237 SGRSGSIRARVHPTTRRSFGVE--PAGSGRIDNRASSTSSCLHQ 278
>sp|Q9CN20|Y626_PASMU UPF0052 protein PM0626 OS=Pasteurella multocida (strain Pm70)
GN=PM0626 PE=3 SV=1
Length = 308
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 62 LLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLR-- 119
++ GG ++ L + +R+ ++ +D+GGST I GG A GD+R+ CL
Sbjct: 19 VVAIGGGHGLGRLMSALSFMKSRLTGIVTTTDNGGSTGRIRLNHGGIAWGDLRN-CLNQI 77
Query: 120 LSDESTPEALAVRRLLGH 137
+++ ST +L R G
Sbjct: 78 ITEPSTASSLFEYRFTGQ 95
>sp|Q54V77|PYRG_DICDI CTP synthase OS=Dictyostelium discoideum GN=ctps PE=3 SV=1
Length = 569
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 74 VVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRS 115
+ EE++N RVAH LPV D G+ V LGG VGDI S
Sbjct: 117 ITEEIQNWIERVAH-LPVDGDKGTPDVCVIELGG-TVGDIES 156
>sp|P03157|DPOL_HBVC5 Protein P OS=Hepatitis B virus genotype C subtype ad (isolate
Japan/S-179/1988) GN=P PE=3 SV=1
Length = 843
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 18/164 (10%)
Query: 140 PLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIG 199
P +P+ A + ++ H+LWK RET R+ SFC S S
Sbjct: 131 PYYPEHAVNHYFKTRHYLHTLWKAGILYKRETTRS--------------ASFCGSPYSWE 176
Query: 200 NFFFAGARVFFQSLDAAIFLF-SRVSDIPSESQVLPVISTNDRLT-LGCELGDGTVIRGQ 257
G VF S F S+ S I S S V P + + + + LG + G++ RG+
Sbjct: 177 QELQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCVRSQLKQSRLGLQPQQGSMARGK 236
Query: 258 NEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHE 301
+ S + P + V PS + +S S+ LH+
Sbjct: 237 SGRSGSIRARVHPTTRRSFGVE--PSGSGHIDNSASSTSSCLHQ 278
>sp|P31870|DPOL_HBVC4 Protein P OS=Hepatitis B virus genotype C subtype adr (isolate
Korea/Kim/1989) GN=P PE=3 SV=1
Length = 842
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 65/164 (39%), Gaps = 18/164 (10%)
Query: 140 PLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIG 199
P +P+ A + ++ H+LWK RET R+ SFC S S
Sbjct: 131 PYYPEHAVNHYFKTRHYLHTLWKAGILYKRETTRS--------------ASFCGSPYSWE 176
Query: 200 NFFFAGARVFFQSLDAAIFLF-SRVSDIPSESQVLPVISTNDRLT-LGCELGDGTVIRGQ 257
G VF S F S+ S I S S V P + + + + LG + G++ RG+
Sbjct: 177 QELQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCVRSQLKQSRLGLQPQQGSLARGK 236
Query: 258 NEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHE 301
+ S + P + V PS + +S S+ LH+
Sbjct: 237 SGRSGSIRARVPPTTRRSFGVE--PSGSGHIDNRASSTSSCLHQ 278
>sp|Q9YZR5|DPOL_HBVC2 Protein P OS=Hepatitis B virus genotype C subtype ar (isolate
Japan/S-207/1988) GN=P PE=3 SV=1
Length = 843
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 18/164 (10%)
Query: 140 PLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIG 199
P +P+ A + ++ H+LW+ RET R+ SFC S S
Sbjct: 131 PYYPEHAVNHYFKTRHYLHTLWQAGILYKRETTRS--------------ASFCGSPYSWE 176
Query: 200 NFFFAGARVFFQSLDAAIFLF-SRVSDIPSESQVLPVISTNDRLT-LGCELGDGTVIRGQ 257
G VF S F S+ S I S S V P + + + + LG + G++ RG+
Sbjct: 177 QELQHGRLVFQTSTRHGDESFCSQSSGILSRSPVGPCVRSQLKQSRLGLQPQQGSLARGK 236
Query: 258 NEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSNLLHE 301
+ S + P + V PS + +S S+ LH+
Sbjct: 237 SGRSGSIRARVHPTTRRSFGVE--PSGSGHIDNSASSASSCLHQ 278
>sp|P0C690|DPOL_HBVC9 Protein P OS=Hepatitis B virus genotype C subtype ayw (isolate
Australia/AustRC/1992) GN=P PE=3 SV=1
Length = 843
Score = 32.7 bits (73), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 17/149 (11%)
Query: 140 PLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIG 199
P +P+ A + ++ H+LWK RET R+ SFC S S
Sbjct: 131 PYYPEHAVNHYFKTRHYLHTLWKAGILYKRETTRS--------------ASFCGSPYSWE 176
Query: 200 NFFFAGARVFFQSLDAAIFLF-SRVSDIPSESQVLPVISTNDRLT-LGCELGDGTVIRGQ 257
G VF S F S+ S I S S V P + + + + LG + G++ RG+
Sbjct: 177 QELQHGRLVFQTSERHGDESFCSQSSGILSRSPVGPCVRSQLKQSRLGLQPQQGSLARGK 236
Query: 258 NEISHPTNGSMEPVKKERSAV-PALPSRI 285
+ S + P + V PA P I
Sbjct: 237 SGRSGSIRARVHPTTRRFFGVEPAGPGHI 265
>sp|P15926|C5AP_STRPY C5a peptidase OS=Streptococcus pyogenes GN=scpA PE=1 SV=1
Length = 1167
Score = 32.3 bits (72), Expect = 5.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 269 EPVKKERSAVPALPSR--------IKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCI 320
+P K+E ++P + R +++ Y S +GS+ HE ANS DQL+
Sbjct: 695 DPTKEELMSIPYIGFRGDFGNLSAVEKPIYDSKDGSSYYHE----ANSDAKDQLDGDGLQ 750
Query: 321 IYAMGSLFTSI 331
YA+ + FT++
Sbjct: 751 FYALKNNFTAL 761
>sp|P0DD35|C5AP_STRPQ C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain SSI-1)
GN=scpA PE=3 SV=1
Length = 1169
Score = 32.0 bits (71), Expect = 7.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 269 EPVKKERSAVPALPSR--------IKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCI 320
+P K+E ++P + R +++ Y S +GS+ HE ANS DQL+
Sbjct: 697 DPTKEELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHE----ANSDAKDQLDGDGLQ 752
Query: 321 IYAMGSLFTSI 331
YA+ + FT++
Sbjct: 753 FYALKNNFTAL 763
>sp|P0DD34|C5AP_STRP3 C5a peptidase OS=Streptococcus pyogenes serotype M3 (strain ATCC
BAA-595 / MGAS315) GN=scpA PE=3 SV=1
Length = 1169
Score = 32.0 bits (71), Expect = 7.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 269 EPVKKERSAVPALPSR--------IKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCI 320
+P K+E ++P + R +++ Y S +GS+ HE ANS DQL+
Sbjct: 697 DPTKEELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHE----ANSDAKDQLDGDGLQ 752
Query: 321 IYAMGSLFTSI 331
YA+ + FT++
Sbjct: 753 FYALKNNFTAL 763
>sp|P58099|C5AP_STRP1 C5a peptidase OS=Streptococcus pyogenes serotype M1 GN=scpA PE=3
SV=1
Length = 1181
Score = 32.0 bits (71), Expect = 7.7, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 12/71 (16%)
Query: 269 EPVKKERSAVPALPSR--------IKRVFYMSSEGSNLLHEVFPTANSAVLDQLNAVDCI 320
+P K+E ++P + R +++ Y S +GS+ HE ANS DQL+
Sbjct: 695 DPTKEELMSIPYIGFRGDFGNLSALEKPIYDSKDGSSYYHE----ANSDAKDQLDGDGLQ 750
Query: 321 IYAMGSLFTSI 331
YA+ + FT++
Sbjct: 751 FYALKNNFTAL 761
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 134,513,766
Number of Sequences: 539616
Number of extensions: 5460270
Number of successful extensions: 11901
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 11849
Number of HSP's gapped (non-prelim): 61
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)