Query 017496
Match_columns 370
No_of_seqs 166 out of 772
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 15:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o2z_A Hypothetical protein; s 100.0 1.9E-66 6.3E-71 508.8 22.3 218 58-367 3-220 (323)
2 2q7x_A UPF0052 protein SP_1565 100.0 5.2E-67 1.8E-71 513.8 17.1 222 58-367 3-226 (326)
3 2p0y_A Hypothetical protein LP 100.0 4.3E-67 1.5E-71 516.9 13.5 223 57-367 8-230 (341)
4 2ppv_A Uncharacterized protein 100.0 1.3E-65 4.6E-70 503.9 21.1 217 58-367 3-219 (332)
5 3c3d_A 2-phospho-L-lactate tra 100.0 8.6E-58 2.9E-62 445.6 15.4 211 62-366 1-222 (311)
6 4g6h_A Rotenone-insensitive NA 81.2 0.64 2.2E-05 47.1 2.4 32 57-88 40-71 (502)
7 3s2u_A UDP-N-acetylglucosamine 68.1 4.8 0.00016 38.4 4.6 45 59-106 2-51 (365)
8 3klj_A NAD(FAD)-dependent dehy 64.4 4.1 0.00014 39.4 3.4 32 58-89 8-39 (385)
9 4eqs_A Coenzyme A disulfide re 62.0 4.7 0.00016 39.6 3.3 26 60-85 1-26 (437)
10 3vrd_B FCCB subunit, flavocyto 60.7 5.5 0.00019 37.9 3.5 35 59-94 2-38 (401)
11 3itj_A Thioredoxin reductase 1 51.9 7.9 0.00027 35.1 2.8 32 58-89 21-52 (338)
12 3f8d_A Thioredoxin reductase ( 51.0 10 0.00036 33.9 3.5 30 59-88 15-44 (323)
13 4hb9_A Similarities with proba 48.3 11 0.00038 35.1 3.3 30 59-88 1-30 (412)
14 3da8_A Probable 5'-phosphoribo 44.4 14 0.00048 33.6 3.2 59 53-113 6-68 (215)
15 1mo9_A ORF3; nucleotide bindin 44.1 16 0.00055 36.6 3.9 35 54-88 38-72 (523)
16 1ryi_A Glycine oxidase; flavop 43.3 17 0.00057 33.8 3.7 31 59-89 17-47 (382)
17 3rp8_A Flavoprotein monooxygen 42.5 15 0.00052 34.8 3.3 31 58-88 22-52 (407)
18 3r9u_A Thioredoxin reductase; 42.3 22 0.00075 31.7 4.2 39 58-96 3-41 (315)
19 3hyw_A Sulfide-quinone reducta 41.0 17 0.00059 35.3 3.5 29 60-88 3-33 (430)
20 1id1_A Putative potassium chan 40.7 25 0.00084 28.8 3.9 33 58-90 2-34 (153)
21 2a87_A TRXR, TR, thioredoxin r 40.3 18 0.00061 33.3 3.3 31 58-88 13-43 (335)
22 3fwz_A Inner membrane protein 39.6 33 0.0011 27.8 4.5 35 56-90 4-38 (140)
23 3lyu_A Putative hydrogenase; t 39.6 16 0.00055 30.3 2.6 30 59-88 18-50 (142)
24 2gag_B Heterotetrameric sarcos 39.4 23 0.00079 33.1 4.0 42 58-99 20-63 (405)
25 3alj_A 2-methyl-3-hydroxypyrid 38.7 19 0.00065 33.8 3.3 31 58-88 10-40 (379)
26 2vdc_G Glutamate synthase [NAD 37.7 28 0.00095 34.5 4.4 32 56-87 119-150 (456)
27 1lss_A TRK system potassium up 37.2 23 0.00079 27.7 3.1 31 58-88 3-33 (140)
28 3a1f_A Cytochrome B-245 heavy 37.2 17 0.00057 30.3 2.4 24 58-81 16-39 (186)
29 2bmw_A Ferredoxin--NADP reduct 37.1 22 0.00077 32.6 3.4 24 58-81 147-170 (304)
30 1qfj_A Protein (flavin reducta 37.1 22 0.00077 31.0 3.3 24 58-81 101-124 (232)
31 3fg2_P Putative rubredoxin red 37.0 24 0.00081 33.8 3.7 30 59-88 1-32 (404)
32 3ics_A Coenzyme A-disulfide re 36.7 19 0.00066 36.3 3.2 32 56-87 33-66 (588)
33 3fbs_A Oxidoreductase; structu 36.7 24 0.00081 31.2 3.4 29 60-88 3-31 (297)
34 2ivd_A PPO, PPOX, protoporphyr 36.5 23 0.00079 34.2 3.6 33 56-88 13-45 (478)
35 3kkj_A Amine oxidase, flavin-c 36.2 29 0.001 28.4 3.7 29 60-88 3-31 (336)
36 2gpj_A Siderophore-interacting 35.4 34 0.0012 30.8 4.3 31 59-89 112-144 (252)
37 2eix_A NADH-cytochrome B5 redu 35.4 24 0.00083 31.0 3.3 24 58-81 115-138 (243)
38 3ps9_A TRNA 5-methylaminomethy 34.1 31 0.0011 35.7 4.2 38 52-89 265-302 (676)
39 3dfz_A SIRC, precorrin-2 dehyd 33.7 33 0.0011 31.3 3.9 33 58-90 30-62 (223)
40 3lrx_A Putative hydrogenase; a 33.7 23 0.00077 29.9 2.6 31 58-88 22-55 (158)
41 3tqr_A Phosphoribosylglycinami 33.6 40 0.0014 30.6 4.5 51 58-109 4-57 (215)
42 3vo2_A Putative uncharacterize 33.4 26 0.00088 32.5 3.2 24 58-81 157-180 (310)
43 3h8l_A NADH oxidase; membrane 33.1 23 0.00079 33.7 2.9 29 60-88 2-33 (409)
44 2e4g_A Tryptophan halogenase; 32.4 30 0.001 34.8 3.8 30 59-88 25-57 (550)
45 1tvc_A Methane monooxygenase c 32.3 30 0.001 30.7 3.4 33 59-91 117-154 (250)
46 3lxd_A FAD-dependent pyridine 32.3 25 0.00087 33.6 3.1 31 58-88 8-40 (415)
47 1ps9_A 2,4-dienoyl-COA reducta 32.3 32 0.0011 35.6 4.0 33 56-88 370-402 (671)
48 1kyq_A Met8P, siroheme biosynt 32.2 26 0.0009 32.9 3.1 35 58-92 12-46 (274)
49 2rc5_A Ferredoxin-NADP reducta 32.1 27 0.00094 32.2 3.2 24 58-81 164-187 (314)
50 3i3l_A Alkylhalidase CMLS; fla 31.8 24 0.00083 36.4 3.0 30 59-88 23-52 (591)
51 3ihm_A Styrene monooxygenase A 31.8 23 0.00078 34.4 2.6 32 58-89 21-52 (430)
52 3k30_A Histamine dehydrogenase 31.8 54 0.0018 34.1 5.6 56 57-115 389-444 (690)
53 1o94_A Tmadh, trimethylamine d 31.6 32 0.0011 36.2 3.9 57 55-114 385-441 (729)
54 2ywl_A Thioredoxin reductase r 31.4 35 0.0012 28.2 3.5 30 60-89 2-31 (180)
55 3sx6_A Sulfide-quinone reducta 31.4 31 0.0011 33.3 3.5 29 60-88 5-36 (437)
56 1trb_A Thioredoxin reductase; 31.1 23 0.00077 31.9 2.3 30 59-88 5-34 (320)
57 4a9w_A Monooxygenase; baeyer-v 30.9 34 0.0012 30.9 3.5 29 60-88 4-32 (357)
58 3vot_A L-amino acid ligase, BL 30.9 48 0.0016 31.9 4.8 38 57-94 3-40 (425)
59 3nix_A Flavoprotein/dehydrogen 30.7 34 0.0012 32.2 3.6 29 60-88 6-34 (421)
60 1fnb_A Ferredoxin-NADP+ reduct 30.1 32 0.0011 31.9 3.2 24 58-81 161-184 (314)
61 3lzw_A Ferredoxin--NADP reduct 30.1 36 0.0012 30.5 3.5 29 60-88 8-36 (332)
62 3ef6_A Toluene 1,2-dioxygenase 30.0 35 0.0012 32.7 3.6 29 60-88 3-33 (410)
63 1ep3_B Dihydroorotate dehydrog 29.8 34 0.0012 30.8 3.3 31 59-89 110-143 (262)
64 3d1c_A Flavin-containing putat 29.1 37 0.0013 31.2 3.5 29 60-88 5-34 (369)
65 3h28_A Sulfide-quinone reducta 28.8 33 0.0011 33.0 3.2 29 60-88 3-33 (430)
66 1ddg_A Sulfite reductase (NADP 28.5 44 0.0015 32.3 4.1 31 51-81 219-249 (374)
67 1xhc_A NADH oxidase /nitrite r 28.4 31 0.0011 32.8 2.9 26 57-82 6-31 (367)
68 1fdr_A Flavodoxin reductase; f 28.3 32 0.0011 30.3 2.8 24 59-82 106-129 (248)
69 1yvv_A Amine oxidase, flavin-c 28.3 42 0.0014 30.3 3.7 29 60-88 3-31 (336)
70 4eh1_A Flavohemoprotein; struc 28.3 33 0.0011 30.1 2.9 25 57-81 112-136 (243)
71 3pvc_A TRNA 5-methylaminomethy 27.3 58 0.002 33.8 4.9 32 58-89 263-294 (689)
72 1nhp_A NADH peroxidase; oxidor 27.3 30 0.001 33.5 2.6 29 60-88 1-31 (447)
73 2weu_A Tryptophan 5-halogenase 27.2 27 0.00093 34.3 2.3 29 60-88 3-34 (511)
74 3cgv_A Geranylgeranyl reductas 27.1 42 0.0014 31.1 3.5 29 60-88 5-33 (397)
75 2vou_A 2,6-dihydroxypyridine h 27.1 44 0.0015 31.6 3.7 30 59-88 5-34 (397)
76 3iwa_A FAD-dependent pyridine 26.9 35 0.0012 33.3 3.0 30 59-88 3-34 (472)
77 2bc0_A NADH oxidase; flavoprot 26.8 37 0.0012 33.5 3.2 30 59-88 35-67 (490)
78 2gqw_A Ferredoxin reductase; f 26.8 40 0.0014 32.4 3.4 31 58-88 6-38 (408)
79 2zbw_A Thioredoxin reductase; 26.5 44 0.0015 30.2 3.5 30 59-88 5-34 (335)
80 2q7v_A Thioredoxin reductase; 26.3 40 0.0014 30.5 3.1 37 59-96 8-44 (325)
81 2hqm_A GR, grase, glutathione 26.2 35 0.0012 33.5 2.9 31 59-89 11-41 (479)
82 3oc4_A Oxidoreductase, pyridin 26.1 34 0.0011 33.3 2.7 29 60-88 3-33 (452)
83 3cty_A Thioredoxin reductase; 26.1 40 0.0014 30.5 3.1 36 60-96 17-52 (319)
84 2aqj_A Tryptophan halogenase, 25.9 39 0.0013 33.7 3.2 31 59-89 5-38 (538)
85 3nrn_A Uncharacterized protein 25.9 39 0.0013 32.1 3.1 29 60-88 1-29 (421)
86 2xdo_A TETX2 protein; tetracyc 25.9 47 0.0016 31.4 3.6 31 59-89 26-56 (398)
87 2r9z_A Glutathione amide reduc 25.8 43 0.0015 32.8 3.4 37 59-96 4-40 (463)
88 2b9w_A Putative aminooxidase; 25.8 54 0.0019 31.0 4.1 31 58-88 5-36 (424)
89 3dme_A Conserved exported prot 25.7 47 0.0016 30.2 3.5 29 60-88 5-33 (369)
90 2gf3_A MSOX, monomeric sarcosi 25.7 47 0.0016 30.7 3.6 30 59-88 3-32 (389)
91 1k0i_A P-hydroxybenzoate hydro 25.6 41 0.0014 31.5 3.2 29 60-88 3-31 (394)
92 1dxl_A Dihydrolipoamide dehydr 25.2 48 0.0016 32.2 3.6 31 59-89 6-36 (470)
93 3kd9_A Coenzyme A disulfide re 25.1 40 0.0014 32.7 3.0 29 59-87 3-33 (449)
94 1f20_A Nitric-oxide synthase; 25.0 55 0.0019 32.4 4.1 30 51-80 271-300 (435)
95 3ka7_A Oxidoreductase; structu 24.9 42 0.0014 31.7 3.0 29 60-88 1-29 (425)
96 3lo8_A Ferredoxin--NADP reduct 24.8 49 0.0017 30.5 3.5 24 58-81 159-182 (311)
97 1cqx_A Flavohemoprotein; globi 24.7 57 0.0019 31.2 4.0 24 58-81 265-288 (403)
98 2x3n_A Probable FAD-dependent 24.7 49 0.0017 31.1 3.5 29 60-88 7-35 (399)
99 2g1u_A Hypothetical protein TM 24.7 58 0.002 26.6 3.6 31 58-88 18-48 (155)
100 1ges_A Glutathione reductase; 24.7 49 0.0017 32.2 3.6 37 59-96 4-40 (450)
101 1y56_B Sarcosine oxidase; dehy 24.6 49 0.0017 30.6 3.5 30 59-88 5-34 (382)
102 1zk7_A HGII, reductase, mercur 24.6 49 0.0017 32.2 3.6 30 59-88 4-33 (467)
103 4fk8_A Ferredoxin--NADP reduct 24.4 36 0.0012 30.6 2.4 24 58-81 121-144 (271)
104 2cnd_A NADH-dependent nitrate 24.3 28 0.00095 31.2 1.6 24 58-81 135-158 (270)
105 3l4b_C TRKA K+ channel protien 24.2 47 0.0016 28.8 3.0 30 60-89 1-30 (218)
106 3k7m_X 6-hydroxy-L-nicotine ox 24.1 49 0.0017 31.3 3.4 29 60-88 2-30 (431)
107 1vdc_A NTR, NADPH dependent th 24.0 51 0.0017 29.8 3.4 31 59-89 8-38 (333)
108 3c4a_A Probable tryptophan hyd 23.7 40 0.0014 31.7 2.7 29 60-88 1-31 (381)
109 1umk_A B5R, NADH-cytochrome B5 23.6 35 0.0012 30.6 2.2 24 58-81 145-168 (275)
110 3urh_A Dihydrolipoyl dehydroge 23.5 52 0.0018 32.3 3.5 30 59-88 25-54 (491)
111 2qae_A Lipoamide, dihydrolipoy 23.4 50 0.0017 32.1 3.4 29 60-88 3-31 (468)
112 2pyx_A Tryptophan halogenase; 23.3 43 0.0015 33.3 3.0 22 59-80 7-28 (526)
113 1m6i_A Programmed cell death p 23.3 35 0.0012 33.9 2.2 30 59-88 11-42 (493)
114 2b5o_A FNR, ferredoxin--NADP r 23.2 53 0.0018 32.0 3.5 24 58-81 249-272 (402)
115 2ywr_A Phosphoribosylglycinami 23.2 57 0.002 29.2 3.5 49 60-109 2-54 (216)
116 1gvh_A Flavohemoprotein; oxido 23.1 51 0.0018 31.5 3.3 33 57-89 257-294 (396)
117 1fl2_A Alkyl hydroperoxide red 22.8 60 0.0021 29.0 3.6 29 60-88 2-30 (310)
118 3c96_A Flavin-containing monoo 22.8 60 0.002 30.8 3.7 31 59-89 4-35 (410)
119 3e1t_A Halogenase; flavoprotei 22.8 55 0.0019 32.4 3.6 29 60-88 8-36 (512)
120 2cdu_A NADPH oxidase; flavoenz 22.7 43 0.0015 32.4 2.7 29 60-88 1-31 (452)
121 3llv_A Exopolyphosphatase-rela 22.7 70 0.0024 25.4 3.6 31 59-89 6-36 (141)
122 2eq6_A Pyruvate dehydrogenase 22.4 55 0.0019 32.0 3.5 29 60-88 7-35 (464)
123 3g3e_A D-amino-acid oxidase; F 22.4 48 0.0016 30.5 2.9 23 60-82 1-23 (351)
124 3fro_A GLGA glycogen synthase; 22.3 75 0.0026 29.3 4.2 37 58-94 1-47 (439)
125 1onf_A GR, grase, glutathione 22.2 54 0.0018 32.4 3.4 36 60-96 3-38 (500)
126 3hh1_A Tetrapyrrole methylase 22.1 50 0.0017 26.4 2.6 18 305-322 20-37 (117)
127 1ebd_A E3BD, dihydrolipoamide 22.1 57 0.0019 31.6 3.5 30 60-89 4-33 (455)
128 2cul_A Glucose-inhibited divis 22.0 70 0.0024 28.0 3.8 32 59-90 3-34 (232)
129 3dk9_A Grase, GR, glutathione 21.6 44 0.0015 32.7 2.5 30 59-88 20-49 (478)
130 3ic5_A Putative saccharopine d 21.6 55 0.0019 24.6 2.7 29 59-87 5-34 (118)
131 1zmd_A Dihydrolipoyl dehydroge 21.5 59 0.002 31.7 3.5 30 59-88 6-35 (474)
132 3dje_A Fructosyl amine: oxygen 21.2 70 0.0024 30.4 3.9 31 59-89 6-37 (438)
133 2r6h_A NADH:ubiquinone oxidore 21.2 53 0.0018 29.6 2.9 23 57-79 154-176 (290)
134 3oz2_A Digeranylgeranylglycero 21.1 62 0.0021 29.5 3.4 27 62-88 7-33 (397)
135 2q0l_A TRXR, thioredoxin reduc 20.8 66 0.0023 28.7 3.4 29 60-88 2-31 (311)
136 3nks_A Protoporphyrinogen oxid 20.8 60 0.002 31.2 3.3 29 60-88 3-33 (477)
137 3uw1_A Ribose-5-phosphate isom 20.8 62 0.0021 30.0 3.3 52 60-115 33-84 (239)
138 2gv8_A Monooxygenase; FMO, FAD 20.7 67 0.0023 31.0 3.6 30 59-88 6-37 (447)
139 3axb_A Putative oxidoreductase 20.5 44 0.0015 32.0 2.3 30 60-89 24-54 (448)
140 1q1r_A Putidaredoxin reductase 20.4 62 0.0021 31.3 3.4 26 59-84 4-29 (431)
141 2bw0_A 10-FTHFDH, 10-formyltet 20.4 70 0.0024 30.6 3.7 50 59-109 22-75 (329)
142 1w4x_A Phenylacetone monooxyge 20.4 66 0.0022 32.2 3.6 36 58-94 15-50 (542)
143 1cjc_A Protein (adrenodoxin re 20.3 54 0.0018 32.4 2.9 25 58-82 5-29 (460)
144 3ntd_A FAD-dependent pyridine 20.2 50 0.0017 32.8 2.7 28 60-87 2-31 (565)
145 1ojt_A Surface protein; redox- 20.1 66 0.0023 31.5 3.5 29 60-88 7-35 (482)
No 1
>2o2z_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, NAD-binding protein; HET: NAD; 2.60A {Bacillus halodurans} PDB: 2hzb_A
Probab=100.00 E-value=1.9e-66 Score=508.82 Aligned_cols=218 Identities=29% Similarity=0.474 Sum_probs=205.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhcC
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLGH 137 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~~L~aLA~~~~~~~~~l~~Lf~~ 137 (370)
++||||+||||||++++++|||+++.++|+||||+|||||||+||++||+++|||||||||+||+.++ .+.+||+|
T Consensus 3 ~~~kiv~lgGGtGl~~ll~gL~~~~~~iT~IVtv~DdGgssG~LR~~~~~~~pGDir~~l~aLa~~~~----~~~~L~~~ 78 (323)
T 2o2z_A 3 KKKNVIVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEP----LLEQLFQH 78 (323)
T ss_dssp CCEEEEEEECSHHHHHHHHHHTTSSEEEEEEECCCCCSHHHHHHHHHHTSCCCHHHHHHHHHHCCCCH----HHHHHHHC
T ss_pred CCCeEEEECCcccHHHHHHHHHhcCCCeEEEEECCcCCccchhhHhhcCCCCCchHHHHHHHhCCCcH----HHHHHHHh
Confidence 57899999999999999999999999999999999999999999999999999999999999999864 68899999
Q ss_pred cCCCCchhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcccccchhHHHHHHHHHHhcCCHHHHH
Q 017496 138 RLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAI 217 (370)
Q Consensus 138 Rf~~~~~~~~~ew~~i~~g~H~lw~~i~~~~~~~ir~fl~~f~~e~l~~~~~~fdl~~hsiGNL~lag~~l~~gsl~~Ai 217 (370)
||+.+ +||++||+||+||+|++.+.|+|++||
T Consensus 79 Rf~~~------------------------------------------------~dlagh~~GNl~L~al~~~~g~~~~ai 110 (323)
T 2o2z_A 79 RFENG------------------------------------------------NGLSGHSLGNLLLAGMTSITGDFARGI 110 (323)
T ss_dssp BCCCC-------------------------------------------------CCTTCBHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCCC------------------------------------------------CccccCcHHHHHHHHHHHccCCHHHHH
Confidence 99852 589999999999999999999999999
Q ss_pred HHHHhhcCCCCCCeEEeCccCCCceEEEEEeCCCcEEeeeeeecCCCCCCCCcccccccCCCCCCCCccEEEEecCCCCC
Q 017496 218 FLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSN 297 (370)
Q Consensus 218 ~~~s~~lgI~~~g~VlP~~~Tdd~v~L~a~l~dG~~i~GE~~I~~~~~~~~~~~~k~~~~~~~~~~~I~rV~l~~~~~~~ 297 (370)
+.+|++++|+ ++|+|| |+++++|+|+++||++++||+||+++ ..+|++|||.+.
T Consensus 111 ~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~ge~~I~~~------------------~~~i~~v~~~p~---- 164 (323)
T 2o2z_A 111 SEMSKVLNVR--GKVLPA--SNRSIILHGEMEDGTIVTGESSIPKA------------------GKKIKRVFLTPK---- 164 (323)
T ss_dssp HHHHHHTTCS--SEEEES--CSSCCEEEEEETTSCEEESTTTGGGG------------------CSCEEEEEEEST----
T ss_pred HHHHHHhCCC--CEEEcC--CCCceEEEEEECCCCEEEEeEcccCC------------------CCCceEEEEeCC----
Confidence 9999999998 899999 69999999999999999999999864 479999999764
Q ss_pred CccccCCCCCHHHHHHHhcCCEEEEcCCCchhhhhhhcccCCcChhHHHHHHhhcccccceeEEEEecCC
Q 017496 298 LLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALLFFYDNID 367 (370)
Q Consensus 298 ~~~~~~~~~~p~vl~AI~~ADlIVigPGSlyTSIlP~Llv~Gi~~~~i~~a~~~~~~~~~~~~~~~~~~~ 367 (370)
.|+++|+|++||++||+||||||||||||+|||+||| |++|++.+ +|.+|||||+-
T Consensus 165 -----~~~~~p~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~g-----i~~Ai~~s----~A~kV~v~Nl~ 220 (323)
T 2o2z_A 165 -----DTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPG-----ICEAIKQS----TARKVYICNVM 220 (323)
T ss_dssp -----TCCCCHHHHHHHHHCSEEEECSSCTTTTHHHHHTSTT-----HHHHHHHC----CSEEEEECCSB
T ss_pred -----CCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCch-----HHHHHHhC----CCCEEEEcCCC
Confidence 4899999999999999999999999999999999998 58999888 99999999984
No 2
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=100.00 E-value=5.2e-67 Score=513.84 Aligned_cols=222 Identities=26% Similarity=0.380 Sum_probs=200.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHc-CCCCCCcHHHHHHHhcCCCChhHHHHHHHhc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVL-GGPAVGDIRSRCLRLSDESTPEALAVRRLLG 136 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~-G~~a~GDIR~~L~aLA~~~~~~~~~l~~Lf~ 136 (370)
++||||+||||||++++++|||+++.++|+||||+|||||||+||+++ |++|||||||||++||+.++ .+.+||+
T Consensus 3 ~~~~IV~igGGtGl~~ll~gLk~~~~~iTaIVtvaDDGGSsG~LR~~~~~i~~pGDiRn~L~aLa~~~~----~~~~L~~ 78 (326)
T 2q7x_A 3 RXPXITVIGGGTGSPVILXSLREXDVEIAAIVTVADDGGSSGELRXNMQQLTPPGDLRNVLVAMSDMPX----FYEXVFQ 78 (326)
T ss_dssp CCCEEEEECCCTTHHHHHHHHHHSSCEEEEEECCBSCGGGGSSCTTTCC----CHHHHHHHHHTSSCHH----HHHHHTT
T ss_pred CCCeEEEEcCcccHHHHHHHhccCCCCeEEEEECccCCccceeehhhhcCCCCccHHHHHHHHhCCCch----HHHHHHH
Confidence 579999999999999999999999999999999999999999999999 99999999999999999863 7899999
Q ss_pred CcCCCCchhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcccccchhHHHHHHHHHHhcCCHHHH
Q 017496 137 HRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAA 216 (370)
Q Consensus 137 ~Rf~~~~~~~~~ew~~i~~g~H~lw~~i~~~~~~~ir~fl~~f~~e~l~~~~~~fdl~~hsiGNL~lag~~l~~gsl~~A 216 (370)
|||+.+ +.+|++||+|||||+|++.+.|+|.+|
T Consensus 79 yRf~~~-----------------------------------------------d~~lagHs~GNl~Laal~~~~G~~~~a 111 (326)
T 2q7x_A 79 YRFSED-----------------------------------------------AGAFAGHPLGNLIIAGLSEMQGSTYNA 111 (326)
T ss_dssp CBCCC---------------------------------------------------CCSCBTTHHHHHHHHHHHSSHHHH
T ss_pred cCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHHhcCCHHHH
Confidence 999752 135999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCeEEeCccCCCceEEEEEeCCCcEEeeeeeecCCCCCCCCcccccccCCCCCCCCccEEEE-ecCCC
Q 017496 217 IFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFY-MSSEG 295 (370)
Q Consensus 217 i~~~s~~lgI~~~g~VlP~~~Tdd~v~L~a~l~dG~~i~GE~~I~~~~~~~~~~~~k~~~~~~~~~~~I~rV~l-~~~~~ 295 (370)
|+.+|++++|+ ++|+|| |+++++|+|+++||++++||+||++. ..+|++||| .+.+
T Consensus 112 i~~~~~~l~v~--g~VlP~--t~~~v~l~A~~~dG~~v~GE~~I~~~------------------~~~I~~v~l~~p~~- 168 (326)
T 2q7x_A 112 MQLLSXFFHTT--GXIYPS--SDHPLTLHAVFQDGTEVAGESHIVDH------------------RGIIDNVYVTNALN- 168 (326)
T ss_dssp HHHHHHHHTCC--SEEEES--BSSCEEEEEEETTSCEEESHHHHHHS------------------CSCEEEEEEEESSC-
T ss_pred HHHHHHHhCCC--eeEeec--CCCceeEEEEecCCceEeeeeecccC------------------CCCceEEEEeCCCC-
Confidence 99999999998 899999 69999999999999999999999874 578999999 5542
Q ss_pred CCCccccCCCCCHHHHHHHhcCCEEEEcCCCchhhhhhhcccCCcChhHHHHHHhhcccccceeEEEEecCC
Q 017496 296 SNLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALLFFYDNID 367 (370)
Q Consensus 296 ~~~~~~~~~~~~p~vl~AI~~ADlIVigPGSlyTSIlP~Llv~Gi~~~~i~~a~~~~~~~~~~~~~~~~~~~ 367 (370)
+..|+++|+|++||++||+||||||||||||+|||+||| |++|++.+ +|.+|||||+.
T Consensus 169 -----~~~~~a~p~al~AI~~AD~IvlgPGSl~TSI~P~Llv~g-----i~~Ai~~s----~A~kV~v~Nlm 226 (326)
T 2q7x_A 169 -----DDTPLASRRVVQTILESDMIVLGPGSLFTSILPNIVIXE-----IGRALLET----XAEIAYVCNIM 226 (326)
T ss_dssp -----SSCCCBCSHHHHHHHHCSEEEECSSCCCCCCHHHHTSHH-----HHHHHHHC----SSEEEEECCSB
T ss_pred -----CCCCCCCHHHHHHHHhCCEEEECCCCCHHHHhhhhhhcc-----HHHHHHhc----cCceEEeccCc
Confidence 235889999999999999999999999999999999997 68999988 99999999974
No 3
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=100.00 E-value=4.3e-67 Score=516.92 Aligned_cols=223 Identities=29% Similarity=0.407 Sum_probs=148.3
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhc
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLG 136 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~~L~aLA~~~~~~~~~l~~Lf~ 136 (370)
.++||||+||||||++++++|||+++.++|+||||+|||||||+||+++|+++||||||||++||+.++ .+.+||+
T Consensus 8 ~~~~kIVvigGGtGl~~ll~gLk~~~~~iTaIVtvaDDGGSSG~lR~~~g~~~pGDiRn~L~aLa~~~~----~~~~L~~ 83 (341)
T 2p0y_A 8 TQRPKIVVIGGGTGLPVVLNGLRKQAVDITAVVTVADDGGSSGIIRNYVNVVPPGDIRNVMVALSSWPD----LYKDIFQ 83 (341)
T ss_dssp --CCEEEEECCGGGHHHHHHHHHHSSSEEEEECC----------------------CHHHHHHHCCCCS----HHHHHTC
T ss_pred cCCCeEEEECCcccHHHHHHHHHhCCCCeEEEEECCcCCccceeHHhhcCCCCCcHHHHHHHHhCCCcH----HHHHHHH
Confidence 367999999999999999999999999999999999999999999999999999999999999999986 7899999
Q ss_pred CcCCCCchhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcccccchhHHHHHHHHHHhcCCHHHH
Q 017496 137 HRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAA 216 (370)
Q Consensus 137 ~Rf~~~~~~~~~ew~~i~~g~H~lw~~i~~~~~~~ir~fl~~f~~e~l~~~~~~fdl~~hsiGNL~lag~~l~~gsl~~A 216 (370)
|||+.+ +.+|++||+|||||+|++.+.|+|++|
T Consensus 84 yRf~~g-----------------------------------------------d~~lagHs~GNL~Laal~~~~G~~~~a 116 (341)
T 2p0y_A 84 YRFQGD-----------------------------------------------DQFFAGHAIGNLIIAALTEMKSGVFDA 116 (341)
T ss_dssp --------------------------------------------------------------CCCC---------CHHHH
T ss_pred cCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHHhcCCHHHH
Confidence 999752 124999999999999999999999999
Q ss_pred HHHHHhhcCCCCCCeEEeCccCCCceEEEEEeCCCcEEeeeeeecCCCCCCCCcccccccCCCCCCCCccEEEEecCCCC
Q 017496 217 IFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGS 296 (370)
Q Consensus 217 i~~~s~~lgI~~~g~VlP~~~Tdd~v~L~a~l~dG~~i~GE~~I~~~~~~~~~~~~k~~~~~~~~~~~I~rV~l~~~~~~ 296 (370)
|+.+|++++|+ ++|+|| |+++++|+|+++||++++||+||++. +++|++|||.+.+
T Consensus 117 i~~~~~~l~v~--g~VlP~--t~~~v~L~A~~~dG~~v~GE~~I~~~------------------~~~I~~v~l~p~~-- 172 (341)
T 2p0y_A 117 VQELSNMMQVD--GHVYPA--ANEALTLHGKFSDGTELVGEAEITAA------------------HKSLERVWVTDKN-- 172 (341)
T ss_dssp HHHHHHHTTCS--SEEECC------CCEEECCSSCC-----------------------------CCCCCCEEEC-----
T ss_pred HHHHHHHhCCC--CEEEcC--CCCceEEEEEECCCCEEEEeEeccCC------------------CCCceEEEEeCCC--
Confidence 99999999998 899999 69999999999999999999999862 6899999997642
Q ss_pred CCccccCCCCCHHHHHHHhcCCEEEEcCCCchhhhhhhcccCCcChhHHHHHHhhcccccceeEEEEecCC
Q 017496 297 NLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALLFFYDNID 367 (370)
Q Consensus 297 ~~~~~~~~~~~p~vl~AI~~ADlIVigPGSlyTSIlP~Llv~Gi~~~~i~~a~~~~~~~~~~~~~~~~~~~ 367 (370)
++.|+++|+|++||++||+||||||||||||+|||+||| |++|++.+ +|.+|||||+-
T Consensus 173 ----~~~~~a~p~al~AI~~AD~IvlgPGSlyTSI~P~Llv~g-----i~~Ai~~s----~A~kV~V~Nlm 230 (341)
T 2p0y_A 173 ----GKEPQAVQPVIDAIMAADQIVLGPGSLFTSILPNLTIGN-----IGRAVCES----DAEVVYICNIM 230 (341)
T ss_dssp -------CCCCHHHHHHHHHCSEEEECSSCCCCCCHHHHSSHH-----HHHHHHHC----SSEEEEECCSB
T ss_pred ----CCCCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCcc-----HHHHHHhC----CCCEEEEeCCC
Confidence 335889999999999999999999999999999999997 68999988 99999999973
No 4
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=100.00 E-value=1.3e-65 Score=503.90 Aligned_cols=217 Identities=28% Similarity=0.441 Sum_probs=205.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCChhHHHHHHHhcC
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTPEALAVRRLLGH 137 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~~L~aLA~~~~~~~~~l~~Lf~~ 137 (370)
++||||+||||||++++++|||+++.++|+||||+|||||||+||+++|+++|||||||||+||+.++ .+.+||+|
T Consensus 3 ~~~kIv~lgGGtGl~~ll~gLk~~~~~iTaIVtv~DDGGSsG~LR~~~g~~~pGDiR~~l~aLa~~~~----~~~~L~~~ 78 (332)
T 2ppv_A 3 KQMNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKIRDVMDIPAPGDIRNVIAALSDSES----ILTQLFQY 78 (332)
T ss_dssp CCEEEEEEECHHHHHHHHHHHTTSSEEEEEEECCCCCSHHHHHHHHHSCCCCCHHHHHHHHHTSCTTS----HHHHHHTC
T ss_pred CCCeEEEEcCcccHHHHHHHHHhCCCCeEEEEECCcCCccchhHHHhcCCCCCchHHHHHHHhCCCcH----HHHHHHHh
Confidence 56899999999999999999999999999999999999999999999999999999999999999876 68899999
Q ss_pred cCCCCchhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcccccchhHHHHHHHHHHhcCCHHHHH
Q 017496 138 RLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFFQSLDAAI 217 (370)
Q Consensus 138 Rf~~~~~~~~~ew~~i~~g~H~lw~~i~~~~~~~ir~fl~~f~~e~l~~~~~~fdl~~hsiGNL~lag~~l~~gsl~~Ai 217 (370)
||+. .||++||+||+||++++.+.|+|++||
T Consensus 79 Rf~~-------------------------------------------------gdlagH~~GNl~L~al~~~~g~~~~ai 109 (332)
T 2ppv_A 79 RFGE-------------------------------------------------NQVDGHSLGNLVIAGMTNITNDFGHAI 109 (332)
T ss_dssp BCCT-------------------------------------------------TSGGGCBHHHHHHHHHHHHHTCHHHHH
T ss_pred CCCC-------------------------------------------------CccccccHHHHHHHHHHHhcCCHHHHH
Confidence 9975 179999999999999999999999999
Q ss_pred HHHHhhcCCCCCCeEEeCccCCCceEEEEEeCCCcEEeeeeeecCCCCCCCCcccccccCCCCCCCCccEEEEecCCCCC
Q 017496 218 FLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFYMSSEGSN 297 (370)
Q Consensus 218 ~~~s~~lgI~~~g~VlP~~~Tdd~v~L~a~l~dG~~i~GE~~I~~~~~~~~~~~~k~~~~~~~~~~~I~rV~l~~~~~~~ 297 (370)
+.+|++++|+ ++|+|| |+++++|+|+++||++++||+||++. +.+|++|||.+.
T Consensus 110 ~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~Ge~~I~~~------------------~~~i~~v~l~p~---- 163 (332)
T 2ppv_A 110 KELSKVLNIK--GQVIPS--TNASVQLNAVMEDGEIVHGETNIPKT------------------HKKIDRVFLEPS---- 163 (332)
T ss_dssp HHHHHHTTCS--SEEEES--CSSCCEEEEEETTSCEEESTTTSSSS------------------CSCEEEEEEESC----
T ss_pred HHHHHHhCCC--CEEECC--CCCceEEEEEECCCCEEEEeeeccCC------------------CCCceEEEEeCC----
Confidence 9999999998 899999 69999999999999999999999863 689999999874
Q ss_pred CccccCCCCCHHHHHHHhcCCEEEEcCCCchhhhhhhcccCCcChhHHHHHHhhcccccceeEEEEecCC
Q 017496 298 LLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALLFFYDNID 367 (370)
Q Consensus 298 ~~~~~~~~~~p~vl~AI~~ADlIVigPGSlyTSIlP~Llv~Gi~~~~i~~a~~~~~~~~~~~~~~~~~~~ 367 (370)
+|+++|+|++||++||+||||||||||||+|||++|| |++|++.+ +|.+|||||+-
T Consensus 164 -----~~~~~p~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~g-----i~~Ai~~s----~A~kV~v~N~~ 219 (332)
T 2ppv_A 164 -----DVEPMNEAIEALEQADLIVLGPGSLYTSVISNLCVKG-----ISEALLRT----SAPKLYVSNVM 219 (332)
T ss_dssp -----CCCCCHHHHHHHHHCSEEEECSSCCCCCCHHHHTSHH-----HHHHHHHC----CSCEEEECCSB
T ss_pred -----CCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCch-----HHHHHHhC----CCCEEEEcCCC
Confidence 4899999999999999999999999999999999997 58999888 99999999984
No 5
>3c3d_A 2-phospho-L-lactate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FO1; 2.50A {Methanosarcina mazei GO1} PDB: 2ffe_A* 3c3e_A* 3cgw_A
Probab=100.00 E-value=8.6e-58 Score=445.56 Aligned_cols=211 Identities=16% Similarity=0.135 Sum_probs=182.4
Q ss_pred EEEEeCCcchhHHHHHHHc--ccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHHHHHHhcCCCCh---h---H---HH
Q 017496 62 LLVFSGGTAFNGVVEELKN--ITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRSRCLRLSDESTP---E---A---LA 130 (370)
Q Consensus 62 IVv~sGGTG~~~LlrgLk~--~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~~L~aLA~~~~~---~---~---~~ 130 (370)
||+||||||++++++|||+ ++.++|+||||+|||||||++ .|||||||||+||+..+. | + ..
T Consensus 1 iv~lgGGtGl~~ll~gLk~~~~~~~itaIVtvaDDGgssG~l-------v~PDir~~l~aLa~~~~~e~~~g~~gdt~~~ 73 (311)
T 3c3d_A 1 MIIFSGGTGTPKLLDGLKEILPEEELTVVVNTAEDLWVSGNL-------ISPDLDTVLYLFSDQIDRKRWWGIENDTFGT 73 (311)
T ss_dssp CEEEECTTHHHHHHHHHTTTSCGGGCEEEECCTTCEEETTEE-------ECHHHHHHHHHTTTCBCTTTTSSBTTCCCHH
T ss_pred CEEEeCcccHHHHHHHHHhCCCCCCeEEEEECCcCCccccCc-------cCccHHHHHHHhCCCccccccccccCchHHH
Confidence 6999999999999999999 579999999999999999975 345999999999998642 1 1 34
Q ss_pred HHHHhcCcCCCCchhhhhhhhhhhcCccccccccCchhHHHHHHHhhhhhhhhhcCCCCCcccccchhHHHHHHHHHHhc
Q 017496 131 VRRLLGHRLPLHPQQAKSEWYNIVEGEHSLWKGVSKPYRETIRAFLSYFQNEILRRPNESFCFSNGSIGNFFFAGARVFF 210 (370)
Q Consensus 131 l~~Lf~~Rf~~~~~~~~~ew~~i~~g~H~lw~~i~~~~~~~ir~fl~~f~~e~l~~~~~~fdl~~hsiGNL~lag~~l~~ 210 (370)
+.+||+|||.. |+. ..++||++|++||++|++ .
T Consensus 74 ~~~L~~~rf~~-------------------~~~------------------------~gd~dlagH~~gNl~L~a----~ 106 (311)
T 3c3d_A 74 YERMKELGIEE-------------------GLK------------------------LGDRDRATHIIRSNIIRD----G 106 (311)
T ss_dssp HHHHHHTTCCC-------------------SSC------------------------CCHHHHHHHHHHHHHHHT----T
T ss_pred HHHHHHhcCcc-------------------ccc------------------------CCCcccccChHHHHHHHc----c
Confidence 55666666542 111 124789999999999998 4
Q ss_pred CCHHHHHHHHHhhcCCCCCCeEEeCccCCCceEEEEEeCCCcEEeeeeeecCCCCCCCCcccccccCCCCCCCCccEEEE
Q 017496 211 QSLDAAIFLFSRVSDIPSESQVLPVISTNDRLTLGCELGDGTVIRGQNEISHPTNGSMEPVKKERSAVPALPSRIKRVFY 290 (370)
Q Consensus 211 gsl~~Ai~~~s~~lgI~~~g~VlP~~~Tdd~v~L~a~l~dG~~i~GE~~I~~~~~~~~~~~~k~~~~~~~~~~~I~rV~l 290 (370)
++|++||+.+|++++|+ ++|+|| |+++++|+|+++||++++||+||+++ ..++|++|+|
T Consensus 107 ~~l~~ai~~~~~~l~v~--g~VlP~--s~~~v~l~a~~~dG~~v~ge~~I~~~-----------------~~~~I~~v~l 165 (311)
T 3c3d_A 107 ASLTDSTVKLSSLFGIK--ANILPM--SDDPVSTYIETAEGIMHFQDFWIGKR-----------------GEPDVRGVDI 165 (311)
T ss_dssp CCHHHHHHHHHHHHTCC--SEEEES--CSSCCEEEEEESSCEEEHHHHHTTST-----------------TCSCEEEEEE
T ss_pred CCHHHHHHHHHHHhCCC--CEEECC--CCCceEEEEEECCCCEEEEeeccCCC-----------------CCCCeeEEEE
Confidence 69999999999999998 899999 69999999999999999999999874 2469999999
Q ss_pred ecCCCCCCccccCCCCCHHHHHHHhcCCEEEEcCCCchhhhhhhcccCCcChhHHHHHHhhcccccceeEEEEecC
Q 017496 291 MSSEGSNLLHEVFPTANSAVLDQLNAVDCIIYAMGSLFTSICPSLVSPYQFWSKIHFSMFMSILMFHALLFFYDNI 366 (370)
Q Consensus 291 ~~~~~~~~~~~~~~~~~p~vl~AI~~ADlIVigPGSlyTSIlP~Llv~Gi~~~~i~~a~~~~~~~~~~~~~~~~~~ 366 (370)
.+.+ .|+++|+|++||++||+||||||||||||+|||++|| |++|++.+ .+|||||+
T Consensus 166 ~~~~--------~~~a~p~vl~AI~~AD~IvlgPGS~~TSI~P~Llv~g-----i~~Al~~s------~kV~v~n~ 222 (311)
T 3c3d_A 166 RGVS--------EASISPKVLEAFEKEENILIGPSNPITSIGPIISLPG-----MRELLKKK------KVVAVSPI 222 (311)
T ss_dssp ETTT--------TCCCCHHHHHHHHHCCEEEECSSCTTTTSHHHHHSTT-----HHHHHHTS------EEEEECCE
T ss_pred cCcc--------CCCCCHHHHHHHHhCCEEEECCCCCHHHHhhhcCchh-----HHHHHHcC------CEEEEccC
Confidence 8643 5889999999999999999999999999999999998 58888766 99999994
No 6
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=81.24 E-value=0.64 Score=47.08 Aligned_cols=32 Identities=13% Similarity=0.309 Sum_probs=27.7
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+||||++|||.|.-.+++.|++...+||.|
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLI 71 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSII 71 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEE
Confidence 35789999999999999999998777777776
No 7
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=68.06 E-value=4.8 Score=38.44 Aligned_cols=45 Identities=20% Similarity=0.267 Sum_probs=30.5
Q ss_pred CCeEEEEeCCcch-----hHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcC
Q 017496 59 QPSLLVFSGGTAF-----NGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLG 106 (370)
Q Consensus 59 ~pkIVv~sGGTG~-----~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G 106 (370)
+.||++-+||||. -.+++.|++..+++..|- +..|--.++....|
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg---~~~g~e~~~v~~~g 51 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLG---TPRGIENDLVPKAG 51 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEE---CSSSTHHHHTGGGT
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEE---CCchHhhchhhhcC
Confidence 4799999999984 468899998888877652 33344444444444
No 8
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=64.40 E-value=4.1 Score=39.44 Aligned_cols=32 Identities=9% Similarity=0.133 Sum_probs=27.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
+.||||++|||.+.-..+..|.....++|.|=
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie 39 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMIN 39 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEEC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEE
Confidence 68999999999999999999966667777653
No 9
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=62.00 E-value=4.7 Score=39.61 Aligned_cols=26 Identities=8% Similarity=0.233 Sum_probs=22.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCe
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRV 85 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~i 85 (370)
||||++|||.|.-..+..|++...+.
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~ 26 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKES 26 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCC
Confidence 89999999999999999999876443
No 10
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=60.74 E-value=5.5 Score=37.87 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=26.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCC--eEEEEeCCCC
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTR--VAHVLPVSDD 94 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~--iT~IVnv~DD 94 (370)
+.||||+|||.|.-..+..|++...+ +|.| .-.+-
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtli-e~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLI-EPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEE-CSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEE-eCCCC
Confidence 67999999999999999999887654 4444 44443
No 11
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=51.88 E-value=7.9 Score=35.08 Aligned_cols=32 Identities=9% Similarity=0.046 Sum_probs=27.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
...+|+++|||.+.-..+..|++...+++.|=
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie 52 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYE 52 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEe
Confidence 45689999999999999999999888866653
No 12
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=50.96 E-value=10 Score=33.91 Aligned_cols=30 Identities=10% Similarity=0.074 Sum_probs=25.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+++|||.+.-..+..|++...+++.|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 44 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVI 44 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEE
Confidence 468999999999999999999987776544
No 13
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=48.35 E-value=11 Score=35.06 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=25.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+||+|+|||-+...++..|++...+++++
T Consensus 1 sm~V~IVGaGpaGl~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGGTCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 379999999999999999999987765544
No 14
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=44.38 E-value=14 Score=33.65 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=35.8
Q ss_pred CCCCCCCCeEEEE--eCCcchhHHHHHHHc-ccCCeEEEEeCCCCCcchHHHHHHcCCCC-CCcH
Q 017496 53 SNPTHTQPSLLVF--SGGTAFNGVVEELKN-ITTRVAHVLPVSDDGGSTAEIVRVLGGPA-VGDI 113 (370)
Q Consensus 53 ~~~~~~~pkIVv~--sGGTG~~~LlrgLk~-~~~~iT~IVnv~DDGGSSG~LR~~~G~~a-~GDI 113 (370)
..+|...+||+|| |.||-+..++..++. +..++.+||+--|-. .-+.-+.+|+|. ..++
T Consensus 6 ~~~~~~~~ri~vl~SG~gsnl~all~~~~~~~~~eI~~Vis~~~a~--~~~~A~~~gIp~~~~~~ 68 (215)
T 3da8_A 6 RVPPSAPARLVVLASGTGSLLRSLLDAAVGDYPARVVAVGVDRECR--AAEIAAEASVPVFTVRL 68 (215)
T ss_dssp EECCCSSEEEEEEESSCCHHHHHHHHHSSTTCSEEEEEEEESSCCH--HHHHHHHTTCCEEECCG
T ss_pred cCCCCCCcEEEEEEeCChHHHHHHHHHHhccCCCeEEEEEeCCchH--HHHHHHHcCCCEEEeCc
Confidence 3445567899999 555555677777654 334788888766632 123346777763 2354
No 15
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=44.09 E-value=16 Score=36.60 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=28.5
Q ss_pred CCCCCCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 54 NPTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 54 ~~~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+....+|||+|||.+.-..+..|++...+++.|
T Consensus 38 ~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~li 72 (523)
T 1mo9_A 38 ENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLIV 72 (523)
T ss_dssp TTCCSCBSEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCcCCEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 33445679999999999999999999987776644
No 16
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=43.29 E-value=17 Score=33.81 Aligned_cols=31 Identities=16% Similarity=0.109 Sum_probs=25.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
...|+|+|||.+...++..|.+...++++|=
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE 47 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFE 47 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEe
Confidence 3589999999999999999998777766553
No 17
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=42.53 E-value=15 Score=34.84 Aligned_cols=31 Identities=13% Similarity=0.028 Sum_probs=25.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
+..+|+|+|||-+...++..|++...++++|
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~ 52 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVY 52 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 3568999999999999999999987765544
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=42.29 E-value=22 Score=31.69 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=31.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
...+|+++|||.+.-..+..|++...+++.|+--..-||
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG 41 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGG 41 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCc
Confidence 346899999999999999999998888888666533344
No 19
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=41.00 E-value=17 Score=35.26 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=23.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcccC--CeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~--~iT~I 88 (370)
.|||++|||.|.-..++.|++... +||.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI 33 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEE
Confidence 589999999999999999998754 45544
No 20
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=40.66 E-value=25 Score=28.83 Aligned_cols=33 Identities=9% Similarity=0.074 Sum_probs=28.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEe
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVn 90 (370)
.+++|+++|+|.=...+++.|.+...++++|-.
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~ 34 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISN 34 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEC
Confidence 357899999999999999999988888877754
No 21
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=40.26 E-value=18 Score=33.26 Aligned_cols=31 Identities=10% Similarity=-0.049 Sum_probs=26.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
...+|+++|||.+.-..+..|++...+++.|
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 43 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVF 43 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 4568999999999999999998887776654
No 22
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=39.63 E-value=33 Score=27.77 Aligned_cols=35 Identities=11% Similarity=-0.025 Sum_probs=28.7
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcccCCeEEEEe
Q 017496 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (370)
Q Consensus 56 ~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVn 90 (370)
...+.+|+++|.|.=...+++.|++...++++|-.
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~ 38 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLASDIPLVVIET 38 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 34577999999999999999999988777766644
No 23
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=39.60 E-value=16 Score=30.32 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=21.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcc---cCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNI---TTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~---~~~iT~I 88 (370)
..++++++||+|+.-++.=++.+ ..+++.+
T Consensus 18 ~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~ 50 (142)
T 3lyu_A 18 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTL 50 (142)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEE
Confidence 46899999999988876655544 3445444
No 24
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=39.36 E-value=23 Score=33.06 Aligned_cols=42 Identities=21% Similarity=0.090 Sum_probs=30.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHc-cc-CCeEEEEeCCCCCcchH
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKN-IT-TRVAHVLPVSDDGGSTA 99 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~-~~-~~iT~IVnv~DDGGSSG 99 (370)
....|+|+|||.+...++..|.+ .. .++++|=--.--+|+|+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~~~~gas~ 63 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGWLAGGNMA 63 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSSTTCSGGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCCCCCCccc
Confidence 45689999999999999999998 76 67665533222334555
No 25
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=38.67 E-value=19 Score=33.84 Aligned_cols=31 Identities=23% Similarity=-0.027 Sum_probs=25.2
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
...+|+|+|||.+...++..|++...++++|
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~vi 40 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLH 40 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 3578999999999999999999986665444
No 26
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=37.66 E-value=28 Score=34.54 Aligned_cols=32 Identities=25% Similarity=0.123 Sum_probs=26.4
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcccCCeEE
Q 017496 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAH 87 (370)
Q Consensus 56 ~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~ 87 (370)
+..+.+|+|+|||.+.-..+..|++..++++.
T Consensus 119 ~~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v 150 (456)
T 2vdc_G 119 RELGLSVGVIGAGPAGLAAAEELRAKGYEVHV 150 (456)
T ss_dssp SSCCCCEEEECCSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEE
Confidence 34678999999999999999999988777543
No 27
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=37.25 E-value=23 Score=27.73 Aligned_cols=31 Identities=6% Similarity=0.050 Sum_probs=24.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+++|+++|+|.=...+++.|.+...+++++
T Consensus 3 ~~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~ 33 (140)
T 1lss_A 3 HGMYIIIAGIGRVGYTLAKSLSEKGHDIVLI 33 (140)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 3579999999998889999999877666554
No 28
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=37.24 E-value=17 Score=30.34 Aligned_cols=24 Identities=13% Similarity=0.281 Sum_probs=19.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++|+++||||..-++.-|+.+
T Consensus 16 ~~~~~vlIagG~GItP~~s~l~~l 39 (186)
T 3a1f_A 16 SYEVVMLVGAGIGVTPFASILKSV 39 (186)
T ss_dssp TSSEEEEEEEGGGHHHHHHHHHHH
T ss_pred hCCeEEEEecCccHHHHHHHHHHH
Confidence 346899999999999887766644
No 29
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=37.12 E-value=22 Score=32.62 Aligned_cols=24 Identities=17% Similarity=0.397 Sum_probs=19.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=|+++
T Consensus 147 ~~~~~vlIagGtGIaP~~s~l~~~ 170 (304)
T 2bmw_A 147 PEANVIMLAGGTGITPMRTYLWRM 170 (304)
T ss_dssp TTCEEEEEEEGGGHHHHHHHHHHH
T ss_pred CCCCEEEEecCccHHHHHHHHHHH
Confidence 356899999999999887666543
No 30
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=37.11 E-value=22 Score=31.04 Aligned_cols=24 Identities=21% Similarity=0.389 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++|+++||||+.-++.=++++
T Consensus 101 ~~~~~vliagG~GitP~~~~l~~l 124 (232)
T 1qfj_A 101 EERPMILIAGGTGFSYARSILLTA 124 (232)
T ss_dssp SSSCEEEEEETTCHHHHHHHHHHH
T ss_pred CCCcEEEEEecccHhHHHHHHHHH
Confidence 457899999999999877766654
No 31
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=36.99 E-value=24 Score=33.77 Aligned_cols=30 Identities=23% Similarity=0.295 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccC--CeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~--~iT~I 88 (370)
+++||++|||.+.-..+..|++... +++.|
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~li 32 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALI 32 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEE
Confidence 3689999999999999999999876 55544
No 32
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=36.72 E-value=19 Score=36.32 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=25.0
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcc--cCCeEE
Q 017496 56 THTQPSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (370)
Q Consensus 56 ~~~~pkIVv~sGGTG~~~LlrgLk~~--~~~iT~ 87 (370)
+...++|||+|||.+.-..+..|++. ..+++.
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~v 66 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRRLSEEDEIIM 66 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEE
T ss_pred cccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEE
Confidence 34567999999999999999999987 344444
No 33
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=36.68 E-value=24 Score=31.16 Aligned_cols=29 Identities=14% Similarity=0.124 Sum_probs=25.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+++|||.+.-..+..|++...+++.|
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li 31 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLV 31 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999988777666
No 34
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=36.49 E-value=23 Score=34.18 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=24.0
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 56 ~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
....++|+|+|||-+.-..+..|++...+++++
T Consensus 13 ~~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~ 45 (478)
T 2ivd_A 13 RTTGMNVAVVGGGISGLAVAHHLRSRGTDAVLL 45 (478)
T ss_dssp ----CCEEEECCBHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 345679999999999999999998876665543
No 35
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=36.17 E-value=29 Score=28.36 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..|+|+|||-+...++..|++...+++++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 45999999999999999999987775554
No 36
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=35.41 E-value=34 Score=30.78 Aligned_cols=31 Identities=16% Similarity=0.127 Sum_probs=23.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccC--CeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~--~iT~IV 89 (370)
..++++++||||+.-++.=|+.+.. .+++++
T Consensus 112 ~~~~lliagGtGitPi~s~l~~l~~~~~~~~~~ 144 (252)
T 2gpj_A 112 ADWFLLAGDMTALPAISVNLAKLPNNAVGYAVI 144 (252)
T ss_dssp SSEEEEEEEGGGHHHHHHHHHHSCTTCEEEEEE
T ss_pred CceEEEEcchhhHHHHHHHHHhCCCCCcEEEEE
Confidence 3589999999999999888887753 344443
No 37
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=35.37 E-value=24 Score=31.04 Aligned_cols=24 Identities=17% Similarity=0.336 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.-++++
T Consensus 115 ~~~~~vliagG~GiaP~~~~l~~l 138 (243)
T 2eix_A 115 MVKEMGMIAGGTGITPMLQVARAI 138 (243)
T ss_dssp SSSEEEEEEEGGGHHHHHHHHHHH
T ss_pred CCcEEEEEecCccHHHHHHHHHHH
Confidence 456899999999999887766654
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=34.08 E-value=31 Score=35.66 Aligned_cols=38 Identities=16% Similarity=0.117 Sum_probs=29.5
Q ss_pred CCCCCCCCCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 52 FSNPTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 52 ~~~~~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
+.+++.....|+|+|||.+....+..|.+...++++|=
T Consensus 265 ~~~~~~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlE 302 (676)
T 3ps9_A 265 FNRTGSSKREAAIIGGGIASALLSLALLRRGWQVTLYC 302 (676)
T ss_dssp GCCCCCSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred ccCccCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 33444456799999999999999999998877665554
No 39
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=33.71 E-value=33 Score=31.29 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEe
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVn 90 (370)
.+.+|+|+|||.=....++.|.+...++++|-+
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECC
Confidence 678999999999999999999999889887754
No 40
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=33.70 E-value=23 Score=29.91 Aligned_cols=31 Identities=16% Similarity=0.060 Sum_probs=21.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc---cCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI---TTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~---~~~iT~I 88 (370)
...++++++||+|..-++.=++.+ ..+++.+
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~ 55 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTL 55 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEE
Confidence 356899999999988877655544 3445544
No 41
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=33.57 E-value=40 Score=30.55 Aligned_cols=51 Identities=12% Similarity=0.275 Sum_probs=34.3
Q ss_pred CCCeEEEE--eCCcchhHHHHHHHc-ccCCeEEEEeCCCCCcchHHHHHHcCCCC
Q 017496 58 TQPSLLVF--SGGTAFNGVVEELKN-ITTRVAHVLPVSDDGGSTAEIVRVLGGPA 109 (370)
Q Consensus 58 ~~pkIVv~--sGGTG~~~LlrgLk~-~~~~iT~IVnv~DDGGSSG~LR~~~G~~a 109 (370)
..+||+|| |.||-+..++..+++ +..++.+||+--+|... -+.-+.+|+|.
T Consensus 4 ~~~riavl~SG~Gsnl~all~~~~~~~~~eI~~Vis~~~~a~~-~~~A~~~gIp~ 57 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQAIIGAIQKGLAIEIRAVISNRADAYG-LKRAQQADIPT 57 (215)
T ss_dssp CCEEEEEEESSCCHHHHHHHHHHHTTCSEEEEEEEESCTTCHH-HHHHHHTTCCE
T ss_pred CCcEEEEEEeCCcHHHHHHHHHHHcCCCCEEEEEEeCCcchHH-HHHHHHcCCCE
Confidence 35789998 556677788988876 45678888885555321 23446677764
No 42
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=33.37 E-value=26 Score=32.54 Aligned_cols=24 Identities=13% Similarity=0.248 Sum_probs=19.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=|+++
T Consensus 157 ~~~~~vlIagGtGIaP~~s~l~~~ 180 (310)
T 3vo2_A 157 PNATVIMLATGTGIAPFRSFLWKM 180 (310)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCcchhHHHHHHHHH
Confidence 456899999999999888777654
No 43
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=33.10 E-value=23 Score=33.69 Aligned_cols=29 Identities=21% Similarity=0.196 Sum_probs=24.2
Q ss_pred CeEEEEeCCcchhHHHHHHHc---ccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~---~~~~iT~I 88 (370)
++||++|||.+.-..+..|++ ...++|.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vi 33 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVI 33 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 589999999999999999998 55666655
No 44
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=32.42 E-value=30 Score=34.77 Aligned_cols=30 Identities=23% Similarity=0.191 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHc---ccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~---~~~~iT~I 88 (370)
..+|||+|||++...++..|++ ...++++|
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~li 57 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLL 57 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEE
Confidence 3589999999999999999998 55566555
No 45
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=32.34 E-value=30 Score=30.70 Aligned_cols=33 Identities=18% Similarity=0.290 Sum_probs=23.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc-----CCeEEEEeC
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT-----TRVAHVLPV 91 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~-----~~iT~IVnv 91 (370)
..++|+++||||+.-++.=++++. .+++.+..+
T Consensus 117 ~~~~vliagGtGiaP~~~~l~~l~~~~~~~~v~l~~~~ 154 (250)
T 1tvc_A 117 MAPRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGV 154 (250)
T ss_dssp SSCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEEC
T ss_pred CceEEEEEeccCHHHHHHHHHHHHhcCCCceEEEEEEe
Confidence 468999999999998877666542 456655443
No 46
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=32.31 E-value=25 Score=33.61 Aligned_cols=31 Identities=10% Similarity=0.139 Sum_probs=25.9
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCC--eEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTR--VAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~--iT~I 88 (370)
...+|||+|||.+.-..+..|++...+ ++.|
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~li 40 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVI 40 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEE
Confidence 456899999999999999999998766 5544
No 47
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=32.29 E-value=32 Score=35.64 Aligned_cols=33 Identities=15% Similarity=0.057 Sum_probs=26.5
Q ss_pred CCCCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 56 THTQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 56 ~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
+....+|||+|||.+.-..+..|++...+++.|
T Consensus 370 ~~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~li 402 (671)
T 1ps9_A 370 AVQKKNLAVVGAGPAGLAFAINAAARGHQVTLF 402 (671)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 345679999999999999999999877665443
No 48
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=32.17 E-value=26 Score=32.94 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=30.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCC
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVS 92 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~ 92 (370)
.+.+|+|+|||.=..+.++.|.+..+++++|-+-.
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57899999999999999999999999999886544
No 49
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=32.14 E-value=27 Score=32.24 Aligned_cols=24 Identities=8% Similarity=0.231 Sum_probs=19.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=|+++
T Consensus 164 ~~~~~vlIagGtGIaP~~s~l~~l 187 (314)
T 2rc5_A 164 FSGDIMFLATGTGIAPFIGMSEEL 187 (314)
T ss_dssp BCSCEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHH
Confidence 456899999999999887766654
No 50
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=31.85 E-value=24 Score=36.36 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=24.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+|+|||.+...++..|++...++++|
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~Li 52 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIY 52 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEE
Confidence 468999999999999999999876655444
No 51
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=31.78 E-value=23 Score=34.38 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=26.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
...+|+|+|||-+...++..|++...++++|=
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE 52 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYT 52 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEc
Confidence 44689999999999999999999887777665
No 52
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=31.75 E-value=54 Score=34.06 Aligned_cols=56 Identities=13% Similarity=0.092 Sum_probs=35.9
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHH
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRS 115 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~ 115 (370)
....+|||+|||.+.-..+..|++..++++.| --.+. -.|.+......+...|...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~li-E~~~~--~GG~~~~~~~~p~~~~~~~ 444 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLA-EAGRD--LGGRVTQESALPGLSAWGR 444 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEE-CSSSS--SCTHHHHHHTSTTCGGGGH
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEE-ecCCC--CCCEeeeccCCCchhHHHH
Confidence 35679999999999999999999887775443 22222 2244444444444444443
No 53
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=31.56 E-value=32 Score=36.17 Aligned_cols=57 Identities=16% Similarity=0.213 Sum_probs=36.7
Q ss_pred CCCCCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHH
Q 017496 55 PTHTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIR 114 (370)
Q Consensus 55 ~~~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR 114 (370)
++....+|||+|||.+.-..+..|++..++++.| .-.+. ..|.++.....|...+++
T Consensus 385 ~~~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtli-e~~~~--~GG~~~~~~~~pg~~~~~ 441 (729)
T 1o94_A 385 QTKNKDSVLIVGAGPSGSEAARVLMESGYTVHLT-DTAEK--IGGHLNQVAALPGLGEWS 441 (729)
T ss_dssp CCSSCCEEEEECCSHHHHHHHHHHHHTTCEEEEE-CSSSS--TTTTHHHHTTSTTCGGGH
T ss_pred cccCCceEEEECCCHHHHHHHHHHHHCCCeEEEE-eCCCC--cCCeeeecccCCChHHHH
Confidence 3445679999999999999999999887764433 22222 234555544444444544
No 54
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=31.44 E-value=35 Score=28.17 Aligned_cols=30 Identities=17% Similarity=0.063 Sum_probs=25.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
.+|+++|||-..-.++..|++...+++.|-
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie 31 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLD 31 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEe
Confidence 379999999999999999999887777664
No 55
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=31.35 E-value=31 Score=33.35 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=23.9
Q ss_pred CeEEEEeCCcchhHHHHHHHc---ccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~---~~~~iT~I 88 (370)
.+||++|||.+.-..+..|++ ...++|.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtli 36 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLI 36 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEE
Confidence 589999999999999999988 45566554
No 56
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=31.11 E-value=23 Score=31.93 Aligned_cols=30 Identities=13% Similarity=0.121 Sum_probs=25.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+++|||.+.-..+..|++...+++.|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 34 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLI 34 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 468999999999999999999887776544
No 57
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=30.94 E-value=34 Score=30.88 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+++|||.+.-.++..|++...+++.|
T Consensus 4 ~~vvIIG~G~aGl~~A~~l~~~g~~v~vi 32 (357)
T 4a9w_A 4 VDVVVIGGGQSGLSAGYFLRRSGLSYVIL 32 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 47999999999999999999988776655
No 58
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=30.93 E-value=48 Score=31.86 Aligned_cols=38 Identities=13% Similarity=0.242 Sum_probs=32.6
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCC
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDD 94 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DD 94 (370)
.++.++++++||..++.++++.++...++++|-+..|+
T Consensus 3 ~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~~~ 40 (425)
T 3vot_A 3 KRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSAED 40 (425)
T ss_dssp CCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETTSC
T ss_pred CCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCCcc
Confidence 36789999999999999999999998888777666665
No 59
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=30.67 E-value=34 Score=32.24 Aligned_cols=29 Identities=21% Similarity=0.160 Sum_probs=25.1
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+...++..|++...++++|
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~ 34 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIV 34 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999987766555
No 60
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=30.10 E-value=32 Score=31.87 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=19.3
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=|+++
T Consensus 161 ~~~~~vlIagGtGIaP~~s~l~~~ 184 (314)
T 1fnb_A 161 PNATIIMLGTGTGIAPFRSFLWKM 184 (314)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHH
Confidence 356899999999999887766654
No 61
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=30.09 E-value=36 Score=30.54 Aligned_cols=29 Identities=10% Similarity=-0.099 Sum_probs=24.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+.-..+..|++...+++.|
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~li 36 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKII 36 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 58999999999999999999877776554
No 62
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=29.95 E-value=35 Score=32.71 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=24.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCC--eEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTR--VAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~--iT~I 88 (370)
++||++|||.+.-..+..|++...+ ++.|
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li 33 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLI 33 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEE
Confidence 4899999999999999999998766 5444
No 63
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=29.78 E-value=34 Score=30.80 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=22.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc---CCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT---TRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~---~~iT~IV 89 (370)
..++++++||||+.-++.=|+++. .+++.+.
T Consensus 110 ~~~~lliagGtGitP~~s~l~~l~~~~~~v~l~~ 143 (262)
T 1ep3_B 110 TDKILIIGGGIGVPPLYELAKQLEKTGCQMTILL 143 (262)
T ss_dssp TSEEEEEEEGGGSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHHcCCeEEEEE
Confidence 578999999999998777666542 3455544
No 64
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=29.06 E-value=37 Score=31.17 Aligned_cols=29 Identities=21% Similarity=0.258 Sum_probs=24.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcccC-CeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITT-RVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~-~iT~I 88 (370)
.+|+++|||.+.-.++..|++... +++.|
T Consensus 5 ~~vvIIGaG~aGl~aA~~l~~~g~~~v~li 34 (369)
T 3d1c_A 5 HKVAIIGAGAAGIGMAITLKDFGITDVIIL 34 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCCcEEEE
Confidence 579999999999999999998776 55443
No 65
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=28.83 E-value=33 Score=33.02 Aligned_cols=29 Identities=17% Similarity=0.366 Sum_probs=23.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
.+||++|||.+.-..+..|++. ..++|.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtli 33 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLI 33 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEE
Confidence 5899999999999999999983 4556554
No 66
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=28.47 E-value=44 Score=32.35 Aligned_cols=31 Identities=13% Similarity=0.273 Sum_probs=21.6
Q ss_pred cCCCCCCCCCeEEEEeCCcchhHHHHHHHcc
Q 017496 51 CFSNPTHTQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 51 ~~~~~~~~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
.|.-++.....|+++|||||++-+..=+++.
T Consensus 219 ~F~lp~~~~~piimIa~GtGIAP~~s~l~~~ 249 (374)
T 1ddg_A 219 NFRLPANPETPVIMIGPGTGIAPFRAFMQQR 249 (374)
T ss_dssp TSCCCSSTTSCEEEECCGGGGHHHHHHHHHH
T ss_pred CccCCCCCCCCEEEEECCccHHHHHHHHHHH
Confidence 4443433456799999999999876655543
No 67
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=28.39 E-value=31 Score=32.77 Aligned_cols=26 Identities=12% Similarity=0.233 Sum_probs=21.7
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHccc
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNIT 82 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~ 82 (370)
+.+.+||++|||.|.-..+..|++..
T Consensus 6 ~~~~~vvIIGgG~AGl~aA~~l~~~g 31 (367)
T 1xhc_A 6 HHGSKVVIVGNGPGGFELAKQLSQTY 31 (367)
T ss_dssp ---CEEEEECCSHHHHHHHHHHTTTS
T ss_pred cCCCcEEEECCcHHHHHHHHHHhhcC
Confidence 36789999999999999999999876
No 68
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=28.35 E-value=32 Score=30.34 Aligned_cols=24 Identities=21% Similarity=0.200 Sum_probs=20.8
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT 82 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~ 82 (370)
..++|+++||||+.-++.=++++.
T Consensus 106 ~~~~vliagG~GitP~~~~l~~l~ 129 (248)
T 1fdr_A 106 CETLWMLATGTAIGPYLSILRLGK 129 (248)
T ss_dssp CSEEEEEEEGGGGHHHHHHHHHCC
T ss_pred CceEEEEEecccHHHHHHHHHHHH
Confidence 578999999999999988888763
No 69
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=28.33 E-value=42 Score=30.32 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=25.1
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..|+|+|||-....++..|++...++++|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vl 31 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEE
Confidence 57999999999999999999987776554
No 70
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=28.27 E-value=33 Score=30.09 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=20.3
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHcc
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
....++++++||||+.-++.=|+++
T Consensus 112 ~~~~~~vliagGtGitp~~~~l~~l 136 (243)
T 4eh1_A 112 ERERPVVLISAGVGATPMQAILHTL 136 (243)
T ss_dssp CCSSCEEEEEEGGGHHHHHHHHHHH
T ss_pred CCCCCEEEEEccccHHHHHHHHHHH
Confidence 4567899999999999887766654
No 71
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=27.34 E-value=58 Score=33.78 Aligned_cols=32 Identities=13% Similarity=0.067 Sum_probs=27.1
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
....|+|+|||.+....+..|.+...++++|=
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlE 294 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGAVVTLYC 294 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCcEEEEe
Confidence 34789999999999999999999887766654
No 72
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=27.29 E-value=30 Score=33.48 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=23.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
++||++|||.|.-..+..|++. ..+++.|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~li 31 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWY 31 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEE
Confidence 4799999999999999999987 4454443
No 73
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=27.19 E-value=27 Score=34.35 Aligned_cols=29 Identities=31% Similarity=0.225 Sum_probs=24.2
Q ss_pred CeEEEEeCCcchhHHHHHHHc---ccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKN---ITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~---~~~~iT~I 88 (370)
.+|||+|||++...++..|++ ...++++|
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lv 34 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLV 34 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEE
Confidence 479999999999999999998 55555544
No 74
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=27.15 E-value=42 Score=31.10 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=24.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..|+|+|||.+...++..|++...++++|
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~ 33 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEE
Confidence 47999999999999999999987766554
No 75
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=27.07 E-value=44 Score=31.59 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=25.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+|+|||-+...++..|++...+++++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~ 34 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVY 34 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 468999999999999999999977665544
No 76
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=26.93 E-value=35 Score=33.30 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=23.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
.++||++|||.+.-..+..|++. ..+++.|
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvi 34 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMI 34 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEE
Confidence 36899999999999999999987 4455443
No 77
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=26.85 E-value=37 Score=33.52 Aligned_cols=30 Identities=7% Similarity=0.110 Sum_probs=24.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc---CCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT---TRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~---~~iT~I 88 (370)
..+||++|||.+.-..+..|++.. .+++.|
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~li 67 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVF 67 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEE
Confidence 478999999999999999998875 454433
No 78
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=26.82 E-value=40 Score=32.38 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=25.3
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCC--eEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTR--VAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~--iT~I 88 (370)
...+||++|||.+.-..+..|++...+ ++.|
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~li 38 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVV 38 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEE
Confidence 457899999999999999999988654 5443
No 79
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=26.47 E-value=44 Score=30.23 Aligned_cols=30 Identities=10% Similarity=-0.085 Sum_probs=25.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+++|||.+.-..+..|++...+++.|
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li 34 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFV 34 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEE
Confidence 358999999999999999998877776544
No 80
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=26.25 E-value=40 Score=30.52 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=28.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
..+|+++|||.+.-..+..|++...+++.|=. .+-||
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg 44 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEK-GMPGG 44 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTG
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeC-CCCCc
Confidence 45899999999999999999988777655533 34444
No 81
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=26.22 E-value=35 Score=33.53 Aligned_cols=31 Identities=16% Similarity=0.151 Sum_probs=26.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
..+|+|+|||.|.-..+..|++...+++.|=
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE 41 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVE 41 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEE
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEe
Confidence 4689999999999999999998877765553
No 82
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=26.12 E-value=34 Score=33.29 Aligned_cols=29 Identities=3% Similarity=0.044 Sum_probs=23.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
++||++|||.+.-..+..|++. ..+++.|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vi 33 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLI 33 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEE
Confidence 6899999999999999999987 4455433
No 83
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=26.08 E-value=40 Score=30.48 Aligned_cols=36 Identities=17% Similarity=0.067 Sum_probs=27.7
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
.+|+++|||.+.-..+..|++...+++.|=. .+-||
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg 52 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGG 52 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTG
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCc
Confidence 5799999999999999999988777665533 33343
No 84
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=25.92 E-value=39 Score=33.72 Aligned_cols=31 Identities=16% Similarity=0.150 Sum_probs=25.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHc---ccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKN---ITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~---~~~~iT~IV 89 (370)
..+|||+|||.+...++..|.+ ...++++|=
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE 38 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIE 38 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEEC
Confidence 3689999999999999999998 666665553
No 85
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=25.89 E-value=39 Score=32.10 Aligned_cols=29 Identities=10% Similarity=-0.104 Sum_probs=23.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
++|+|+|||.+.-..+.-|++...+++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vl 29 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVL 29 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999999999998876664433
No 86
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.86 E-value=47 Score=31.39 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=26.0
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
..+|+|+|||-+...++..|++...+++++=
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E 56 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYE 56 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEe
Confidence 4689999999999999999999876665543
No 87
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=25.78 E-value=43 Score=32.83 Aligned_cols=37 Identities=27% Similarity=0.347 Sum_probs=28.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
..+|+|+|||.|.-..+..|++...+++.|=. .+-||
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~-~~~GG 40 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIES-KALGG 40 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcC-CCCCC
Confidence 46899999999999999999988777665543 34443
No 88
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=25.77 E-value=54 Score=30.95 Aligned_cols=31 Identities=10% Similarity=0.043 Sum_probs=25.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHccc-CCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNIT-TRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~-~~iT~I 88 (370)
...+|+|+|||.+.-..+.-|++.. .+++++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~ 36 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTIL 36 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEE
Confidence 4578999999999988888898876 676654
No 89
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=25.71 E-value=47 Score=30.17 Aligned_cols=29 Identities=14% Similarity=0.062 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..|+|+|||.+....+..|.+...++++|
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vl 33 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVA 33 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 57999999999999999999987776654
No 90
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=25.65 E-value=47 Score=30.68 Aligned_cols=30 Identities=13% Similarity=0.087 Sum_probs=24.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
...|+|+|||.+...++..|++...++++|
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vi 32 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLV 32 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 357999999999999999999887775544
No 91
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=25.61 E-value=41 Score=31.46 Aligned_cols=29 Identities=7% Similarity=-0.014 Sum_probs=25.1
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||-+...++..|++...++++|
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~ 31 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVIL 31 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEE
Confidence 47999999999999999999987776554
No 92
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.20 E-value=48 Score=32.19 Aligned_cols=31 Identities=6% Similarity=0.141 Sum_probs=26.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
..+|+++|||.+.-..+..|++...+++.|=
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE 36 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIE 36 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEe
Confidence 4789999999999999999998877765553
No 93
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=25.05 E-value=40 Score=32.68 Aligned_cols=29 Identities=17% Similarity=0.248 Sum_probs=23.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc--CCeEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT--TRVAH 87 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~--~~iT~ 87 (370)
.++||++|||.+.-..+..|++.. .+++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~v 33 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKV 33 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEE
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEE
Confidence 468999999999999999999874 44443
No 94
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=25.05 E-value=55 Score=32.39 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=20.7
Q ss_pred cCCCCCCCCCeEEEEeCCcchhHHHHHHHc
Q 017496 51 CFSNPTHTQPSLLVFSGGTAFNGVVEELKN 80 (370)
Q Consensus 51 ~~~~~~~~~pkIVv~sGGTG~~~LlrgLk~ 80 (370)
.|.-++.....|+++|||||++-+..=|++
T Consensus 271 ~F~lp~~~~~piilIagGtGIAP~~s~l~~ 300 (435)
T 1f20_A 271 SFHLPRNPQVPCILVGPGTGIAPFRSFWQQ 300 (435)
T ss_dssp TSSCCSCTTSCEEEECCGGGGHHHHHHHHH
T ss_pred CccCCCCCCCCEEEEECCcCcHHHHHHHHH
Confidence 444333345679999999999987665543
No 95
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=24.86 E-value=42 Score=31.65 Aligned_cols=29 Identities=14% Similarity=0.012 Sum_probs=23.3
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
++|+|+|||.+.-..+.-|++...+++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vl 29 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVF 29 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 47999999998888888888876655444
No 96
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=24.81 E-value=49 Score=30.47 Aligned_cols=24 Identities=13% Similarity=0.252 Sum_probs=19.7
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++|+++||||+.-++.=|+++
T Consensus 159 ~~~~~vlIagGtGIaP~~s~l~~~ 182 (311)
T 3lo8_A 159 PNATHIMIATGTGVAPFRGYLRRM 182 (311)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEECCEEHHHHHHHHHHH
Confidence 456899999999999888766654
No 97
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=24.70 E-value=57 Score=31.22 Aligned_cols=24 Identities=25% Similarity=0.476 Sum_probs=19.8
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++|+++||||+.-++.=|+.+
T Consensus 265 ~~~~~vlIagGtGitP~~s~l~~l 288 (403)
T 1cqx_A 265 AKTPIVLISGGVGLTPMVSMLKVA 288 (403)
T ss_dssp CCSCEEEEESSCCHHHHHHHHHHH
T ss_pred CCCCEEEEEecccHhhHHHHHHHH
Confidence 456899999999999888777655
No 98
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=24.69 E-value=49 Score=31.08 Aligned_cols=29 Identities=21% Similarity=0.066 Sum_probs=25.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+...++..|++...++++|
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~vi 35 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVV 35 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEE
Confidence 58999999999999999999987776554
No 99
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=24.66 E-value=58 Score=26.64 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=25.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+++|+++|+|.=...+++.|++...+++++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vi 48 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVV 48 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 3579999999988888999999877665554
No 100
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=24.66 E-value=49 Score=32.21 Aligned_cols=37 Identities=14% Similarity=0.220 Sum_probs=28.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
..+|+|+|||.|.-..+..|++...+++.|=. .+-||
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~-~~~GG 40 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEA-KELGG 40 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcC-CCCCC
Confidence 36899999999999999999998777665543 34444
No 101
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=24.59 E-value=49 Score=30.61 Aligned_cols=30 Identities=20% Similarity=0.326 Sum_probs=25.1
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
...|+|+|||.....++..|.+...++++|
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~ll 34 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVI 34 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 468999999999999999999887775544
No 102
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=24.59 E-value=49 Score=32.21 Aligned_cols=30 Identities=13% Similarity=0.100 Sum_probs=24.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|||+|||.+.-..+..|++...+++.|
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~li 33 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLI 33 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEE
Confidence 468999999999999999999887665444
No 103
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=24.43 E-value=36 Score=30.60 Aligned_cols=24 Identities=17% Similarity=0.307 Sum_probs=20.3
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=++++
T Consensus 121 ~~~~~vliagG~GitP~~~~l~~l 144 (271)
T 4fk8_A 121 PGKTLWMLSTGTGLAPFMSIIRDP 144 (271)
T ss_dssp CCSEEEEEECGGGGHHHHHHTTCH
T ss_pred CCCeEEEEECCEEHHHHHHHHHHH
Confidence 457899999999999998877665
No 104
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=24.27 E-value=28 Score=31.20 Aligned_cols=24 Identities=13% Similarity=0.368 Sum_probs=19.4
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=++++
T Consensus 135 ~~~~~vliagGtGiaP~~~~l~~l 158 (270)
T 2cnd_A 135 NARRLAMICGGSGITPMYQIIQAV 158 (270)
T ss_dssp CCSEEEEEEEGGGHHHHHHHHHHH
T ss_pred cCCEEEEEeccccHHHHHHHHHHH
Confidence 456899999999999887766654
No 105
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=24.17 E-value=47 Score=28.81 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=26.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
|||+++|+|.=...+++.|.+..+++++|-
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid 30 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIIN 30 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 689999999999999999998877777664
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=24.11 E-value=49 Score=31.28 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=24.3
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+.-..+..|++...++++|
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vl 30 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLL 30 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEE
Confidence 37999999999999999999887765554
No 107
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.00 E-value=51 Score=29.79 Aligned_cols=31 Identities=10% Similarity=0.007 Sum_probs=26.2
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
..+|+++|||.+.-.++..|++...+++.|=
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie 38 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFE 38 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEe
Confidence 3589999999999999999998877766654
No 108
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=23.70 E-value=40 Score=31.70 Aligned_cols=29 Identities=24% Similarity=0.177 Sum_probs=23.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
++|+|+|||-+...++..|++. ..+++++
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~ 31 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIV 31 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEE
Confidence 4799999999999999999987 5555444
No 109
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=23.59 E-value=35 Score=30.64 Aligned_cols=24 Identities=25% Similarity=0.448 Sum_probs=19.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++|+++||||+.-++.=|+++
T Consensus 145 ~~~~~vliagGtGIaP~~~~l~~l 168 (275)
T 1umk_A 145 TVKSVGMIAGGTGITPMLQVIRAI 168 (275)
T ss_dssp ECSEEEEEEEGGGHHHHHHHHHHH
T ss_pred CCceEEEEecCccHhHHHHHHHHH
Confidence 356899999999999887776654
No 110
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=23.50 E-value=52 Score=32.32 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=24.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+|+|||.|.-..+..|++...+++.|
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~li 54 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVV 54 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 357999999999999999999987775543
No 111
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=23.42 E-value=50 Score=32.11 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.|.-..+..|++...+++.|
T Consensus 3 ~dvvIIGgG~aGl~aA~~l~~~g~~V~li 31 (468)
T 2qae_A 3 YDVVVIGGGPGGYVASIKAAQLGMKTACV 31 (468)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999999999999987776544
No 112
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=23.34 E-value=43 Score=33.32 Aligned_cols=22 Identities=23% Similarity=0.187 Sum_probs=20.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHc
Q 017496 59 QPSLLVFSGGTAFNGVVEELKN 80 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~ 80 (370)
..+|||+|||++...++..|.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~ 28 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAA 28 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHh
Confidence 3589999999999999999998
No 113
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=23.26 E-value=35 Score=33.89 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=23.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
..+||++|||.|.-..+..|++. ..+++.|
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~li 42 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIV 42 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEE
Confidence 46899999999999999999876 3444443
No 114
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=23.18 E-value=53 Score=31.98 Aligned_cols=24 Identities=13% Similarity=0.224 Sum_probs=19.5
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNI 81 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~ 81 (370)
...++++++||||+.-++.=|+++
T Consensus 249 ~~~~vvlIAgGtGIaP~~s~l~~l 272 (402)
T 2b5o_A 249 EDATVVMLATGTGIAPFRAFLWRM 272 (402)
T ss_dssp TTCEEEEEEEGGGGHHHHHHHHHH
T ss_pred CCCCEEEEEcccCHHHHHHHHHHH
Confidence 356899999999999887766654
No 115
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=23.16 E-value=57 Score=29.24 Aligned_cols=49 Identities=8% Similarity=0.142 Sum_probs=31.5
Q ss_pred CeEEEE--eCCcchhHHHHHHHcccC--CeEEEEeCCCCCcchHHHHHHcCCCC
Q 017496 60 PSLLVF--SGGTAFNGVVEELKNITT--RVAHVLPVSDDGGSTAEIVRVLGGPA 109 (370)
Q Consensus 60 pkIVv~--sGGTG~~~LlrgLk~~~~--~iT~IVnv~DDGGSSG~LR~~~G~~a 109 (370)
+||+|| |.|+-+..+++.|.+-.. ++.+||+--|+-. .-+.-+.+|+|.
T Consensus 2 ~rI~vl~SG~g~~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~-~~~~A~~~gIp~ 54 (216)
T 2ywr_A 2 LKIGVLVSGRGSNLQAIIDAIESGKVNASIELVISDNPKAY-AIERCKKHNVEC 54 (216)
T ss_dssp EEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEESCTTCH-HHHHHHHHTCCE
T ss_pred CEEEEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEeCCCChH-HHHHHHHcCCCE
Confidence 489999 445556678888876544 7888888766532 123345667764
No 116
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=23.08 E-value=51 Score=31.46 Aligned_cols=33 Identities=12% Similarity=0.228 Sum_probs=23.1
Q ss_pred CCCCeEEEEeCCcchhHHHHHHHccc-----CCeEEEE
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELKNIT-----TRVAHVL 89 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk~~~-----~~iT~IV 89 (370)
....++|+++||||+.-++.=|+++. .+++.+.
T Consensus 257 ~~~~~~vlIagGtGitP~~s~l~~l~~~~~~~~v~l~~ 294 (396)
T 1gvh_A 257 ADDTPVTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFH 294 (396)
T ss_dssp CTTCCEEEEEEGGGGHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCCEEEEecchhHhHHHHHHHHHHhcCCCCcEEEEE
Confidence 34568999999999998776655442 3455554
No 117
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=22.79 E-value=60 Score=28.95 Aligned_cols=29 Identities=14% Similarity=0.060 Sum_probs=25.4
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+++|||.+.-..+..|++...+++.|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li 30 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLM 30 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 47999999999999999999987787766
No 118
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=22.78 E-value=60 Score=30.77 Aligned_cols=31 Identities=13% Similarity=0.057 Sum_probs=26.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCC-eEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTR-VAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~-iT~IV 89 (370)
..+|+|+|||-+...++..|++...+ +++|=
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E 35 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLE 35 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEE
Confidence 36899999999999999999998776 66554
No 119
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=22.76 E-value=55 Score=32.43 Aligned_cols=29 Identities=21% Similarity=0.198 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+...++..|++...++++|
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~li 36 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLL 36 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEE
Confidence 58999999999999999999877666555
No 120
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=22.70 E-value=43 Score=32.43 Aligned_cols=29 Identities=14% Similarity=-0.036 Sum_probs=23.3
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~I 88 (370)
++||++|||.|.-..+..|++. ..+++.|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~li 31 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAY 31 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEE
Confidence 3799999999999999999987 4555443
No 121
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.67 E-value=70 Score=25.39 Aligned_cols=31 Identities=26% Similarity=0.246 Sum_probs=25.4
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
.++|+++|+|.=...+++.|++...+++++-
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEE
Confidence 4689999999888889999998877766553
No 122
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=22.44 E-value=55 Score=31.96 Aligned_cols=29 Identities=17% Similarity=0.140 Sum_probs=25.3
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+++|||.|.-..+..|++...+++.|
T Consensus 7 ~dvvIIG~G~aG~~aA~~l~~~g~~V~li 35 (464)
T 2eq6_A 7 YDLIVIGTGPGGYHAAIRAAQLGLKVLAV 35 (464)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEE
Confidence 57999999999999999999987776655
No 123
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=22.36 E-value=48 Score=30.49 Aligned_cols=23 Identities=9% Similarity=-0.018 Sum_probs=19.2
Q ss_pred CeEEEEeCCcchhHHHHHHHccc
Q 017496 60 PSLLVFSGGTAFNGVVEELKNIT 82 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~ 82 (370)
+.|+|+|||.....++..|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G 23 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERY 23 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHhc
Confidence 47999999988888888888765
No 124
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=22.26 E-value=75 Score=29.33 Aligned_cols=37 Identities=22% Similarity=0.390 Sum_probs=27.3
Q ss_pred CCCeEEEEe--------CCcc--hhHHHHHHHcccCCeEEEEeCCCC
Q 017496 58 TQPSLLVFS--------GGTA--FNGVVEELKNITTRVAHVLPVSDD 94 (370)
Q Consensus 58 ~~pkIVv~s--------GGTG--~~~LlrgLk~~~~~iT~IVnv~DD 94 (370)
+.|||++++ ||.+ ...++++|.+..++++++.+..++
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~ 47 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGR 47 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTC
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 358899887 4443 356788999889999999866544
No 125
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.21 E-value=54 Score=32.45 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=27.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCc
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGG 96 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGG 96 (370)
.+|||+|||.|.-..+..|++...+++.| --.+-||
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~g~~V~li-E~~~~GG 38 (500)
T 1onf_A 3 YDLIVIGGGSGGMAAARRAARHNAKVALV-EKSRLGG 38 (500)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEE-ESSSTTH
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCcEEEE-eCCCcCc
Confidence 57999999999999999999887776544 3334444
No 126
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=22.14 E-value=50 Score=26.39 Aligned_cols=18 Identities=11% Similarity=0.148 Sum_probs=16.2
Q ss_pred CCCHHHHHHHhcCCEEEE
Q 017496 305 TANSAVLDQLNAVDCIIY 322 (370)
Q Consensus 305 ~~~p~vl~AI~~ADlIVi 322 (370)
-.+.+++++|++||+|++
T Consensus 20 ~lT~~a~~~L~~advv~~ 37 (117)
T 3hh1_A 20 DMTFRAVNTLRNAGAIAC 37 (117)
T ss_dssp GSCHHHHHHHHHCSEEEE
T ss_pred HhhHHHHHHHHhCCEEEE
Confidence 478999999999999987
No 127
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.14 E-value=57 Score=31.60 Aligned_cols=30 Identities=17% Similarity=0.097 Sum_probs=25.8
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVL 89 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IV 89 (370)
.+|+++|||.|.-..+..|++...+++.|=
T Consensus 4 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie 33 (455)
T 1ebd_A 4 TETLVVGAGPGGYVAAIRAAQLGQKVTIVE 33 (455)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEE
Confidence 579999999999999999999877766553
No 128
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=22.04 E-value=70 Score=27.95 Aligned_cols=32 Identities=16% Similarity=0.065 Sum_probs=26.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEEEe
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHVLP 90 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVn 90 (370)
...|+|+|||.+.-.++..|++...+++.|=.
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~ 34 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQ 34 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEec
Confidence 35799999999999999999998777765544
No 129
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=21.63 E-value=44 Score=32.66 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=25.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+|+|||.|.-..+..|++...+++.|
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~li 49 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVV 49 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 458999999999999999999987775544
No 130
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=21.60 E-value=55 Score=24.59 Aligned_cols=29 Identities=17% Similarity=0.102 Sum_probs=21.6
Q ss_pred CCeEEEEeCCcchhHHHHHHHccc-CCeEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNIT-TRVAH 87 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~-~~iT~ 87 (370)
+++|+++|+|.=...+++.|.+.. .++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~ 34 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTV 34 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEE
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEE
Confidence 468999988777788888888875 44433
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=21.51 E-value=59 Score=31.66 Aligned_cols=30 Identities=7% Similarity=0.076 Sum_probs=25.3
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
..+|+|+|||.|.-..+..|++...+++.|
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~li 35 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCI 35 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 357999999999999999999987776544
No 132
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=21.22 E-value=70 Score=30.38 Aligned_cols=31 Identities=23% Similarity=0.135 Sum_probs=25.5
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccC-CeEEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITT-RVAHVL 89 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~-~iT~IV 89 (370)
...|||+|||.+....+..|.+... ++++|=
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE 37 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLD 37 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEe
Confidence 4579999999999999999998877 666553
No 133
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=21.17 E-value=53 Score=29.61 Aligned_cols=23 Identities=17% Similarity=0.401 Sum_probs=18.3
Q ss_pred CCCCeEEEEeCCcchhHHHHHHH
Q 017496 57 HTQPSLLVFSGGTAFNGVVEELK 79 (370)
Q Consensus 57 ~~~pkIVv~sGGTG~~~LlrgLk 79 (370)
....++|+++||||+.-++.=|+
T Consensus 154 ~~~~~~vliagGtGitP~~s~l~ 176 (290)
T 2r6h_A 154 DTDAEMLYIGGGAGMAPLRAQIL 176 (290)
T ss_dssp SSSCEEEEEEEGGGHHHHHHHHH
T ss_pred CCCCeEEEEECccCHHHHHHHHH
Confidence 34568999999999998885444
No 134
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=21.12 E-value=62 Score=29.52 Aligned_cols=27 Identities=15% Similarity=0.192 Sum_probs=24.2
Q ss_pred EEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 62 LLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 62 IVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
|+|+|||-+...++..|.+...++++|
T Consensus 7 ViIVGaGpaGl~~A~~La~~G~~V~v~ 33 (397)
T 3oz2_A 7 VLVVGGGPGGSTAARYAAKYGLKTLMI 33 (397)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEECcCHHHHHHHHHHHHCCCcEEEE
Confidence 899999999999999999988876655
No 135
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=20.82 E-value=66 Score=28.69 Aligned_cols=29 Identities=10% Similarity=-0.098 Sum_probs=24.2
Q ss_pred CeEEEEeCCcchhHHHHHHHcccC-CeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITT-RVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~-~iT~I 88 (370)
.+|+++|||.+.-..+..|++... +++.|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~li 31 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLF 31 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEE
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEE
Confidence 379999999999999999998776 66554
No 136
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=20.80 E-value=60 Score=31.15 Aligned_cols=29 Identities=21% Similarity=0.274 Sum_probs=23.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcccC--CeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~--~iT~I 88 (370)
++|+|+|||-+.-..+.-|++... +++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vl 33 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLV 33 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEE
Confidence 689999999988888999998766 44443
No 137
>3uw1_A Ribose-5-phosphate isomerase A; ssgcid, seattle structural genomics center for infectious DI isomerase, ribose isomerase; HET: R5P; 1.71A {Burkholderia thailandensis} PDB: 3u7j_A*
Probab=20.79 E-value=62 Score=30.02 Aligned_cols=52 Identities=19% Similarity=0.233 Sum_probs=40.6
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCCCcchHHHHHHcCCCCCCcHHH
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDDGGSTAEIVRVLGGPAVGDIRS 115 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DDGGSSG~LR~~~G~~a~GDIR~ 115 (370)
-++|.+|.||=..-+++.|.+...+++.+||++.. |..+.+.+|++ ..|++.
T Consensus 33 g~vIGLGtGST~~~~i~~L~~~~~~i~~~V~tS~~---t~~~~~~~Gi~-l~~l~~ 84 (239)
T 3uw1_A 33 GAVIGVGTGSTANCFIDALAAVKDRYRGAVSSSVA---TTERLKSHGIR-VFDLNE 84 (239)
T ss_dssp TCEEEECCSHHHHHHHHHHHTTGGGSCEEEESSHH---HHHHHHHTTCC-BCCGGG
T ss_pred CCEEEECccHHHHHHHHHHHhhhccceEEeCCcHH---HHHHHHHcCCc-EEeccc
Confidence 47999999999999999998865678888998876 56666677875 455553
No 138
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=20.65 E-value=67 Score=31.02 Aligned_cols=30 Identities=10% Similarity=0.056 Sum_probs=24.7
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccC--CeEEE
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITT--RVAHV 88 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~--~iT~I 88 (370)
..+|+|+|||-+.-.++..|++... +++++
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~ 37 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLF 37 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEE
Confidence 4689999999999999999998765 54443
No 139
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=20.51 E-value=44 Score=32.01 Aligned_cols=30 Identities=20% Similarity=-0.001 Sum_probs=24.9
Q ss_pred CeEEEEeCCcchhHHHHHHHccc-CCeEEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNIT-TRVAHVL 89 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~-~~iT~IV 89 (370)
..|||+|||.+...++..|++.. .++++|=
T Consensus 24 ~dVvIIGgGiaGls~A~~La~~G~~~V~vlE 54 (448)
T 3axb_A 24 FDYVVVGAGVVGLAAAYYLKVWSGGSVLVVD 54 (448)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCcEEEEc
Confidence 58999999999999999998887 6766553
No 140
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=20.43 E-value=62 Score=31.29 Aligned_cols=26 Identities=15% Similarity=0.075 Sum_probs=22.9
Q ss_pred CCeEEEEeCCcchhHHHHHHHcccCC
Q 017496 59 QPSLLVFSGGTAFNGVVEELKNITTR 84 (370)
Q Consensus 59 ~pkIVv~sGGTG~~~LlrgLk~~~~~ 84 (370)
..+||++|||.+.-..+..|++...+
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~ 29 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWE 29 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcC
Confidence 46899999999999999999988654
No 141
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=20.39 E-value=70 Score=30.64 Aligned_cols=50 Identities=20% Similarity=0.197 Sum_probs=33.3
Q ss_pred CCeEEEEeCCcchh-HHHHHHHcccCCeEEEEeCCCCC-c-c-hHHHHHHcCCCC
Q 017496 59 QPSLLVFSGGTAFN-GVVEELKNITTRVAHVLPVSDDG-G-S-TAEIVRVLGGPA 109 (370)
Q Consensus 59 ~pkIVv~sGGTG~~-~LlrgLk~~~~~iT~IVnv~DDG-G-S-SG~LR~~~G~~a 109 (370)
++||+||| ++-+. .+++.|.+-.+++.+||+--|.- + + -.+.-+.+|+|.
T Consensus 22 ~mrIvf~G-~~~fa~~~L~~L~~~~~~i~~Vvt~pd~~~~~~~v~~~A~~~gIpv 75 (329)
T 2bw0_A 22 SMKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTVPDKDGKADPLGLEAEKDGVPV 75 (329)
T ss_dssp CCEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEECCCCSSCCCHHHHHHHHHTCCE
T ss_pred CCEEEEEc-CcHHHHHHHHHHHHCCCeEEEEEeCCCcCCCCCHHHHHHHHcCCCE
Confidence 38999994 45555 47788877678999999977742 2 2 233445667763
No 142
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=20.38 E-value=66 Score=32.23 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCcchhHHHHHHHcccCCeEEEEeCCCC
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNITTRVAHVLPVSDD 94 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~~~iT~IVnv~DD 94 (370)
...+|+++|||-+.-.++..|++...+++. +--.++
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~i-iE~~~~ 50 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHV-IETAGD 50 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEE-ECSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEE-EeCCCC
Confidence 346899999999999999999987665543 333443
No 143
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=20.31 E-value=54 Score=32.37 Aligned_cols=25 Identities=20% Similarity=0.170 Sum_probs=21.6
Q ss_pred CCCeEEEEeCCcchhHHHHHHHccc
Q 017496 58 TQPSLLVFSGGTAFNGVVEELKNIT 82 (370)
Q Consensus 58 ~~pkIVv~sGGTG~~~LlrgLk~~~ 82 (370)
...+|+|+|||.+.-..+..|++..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g 29 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHH 29 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcC
Confidence 4579999999999999999998875
No 144
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=20.19 E-value=50 Score=32.83 Aligned_cols=28 Identities=11% Similarity=0.237 Sum_probs=23.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcc--cCCeEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNI--TTRVAH 87 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~--~~~iT~ 87 (370)
++|||+|||.+.-..+..|++. ..+++.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~l 31 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIM 31 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEE
Confidence 5899999999999999999987 345543
No 145
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=20.07 E-value=66 Score=31.52 Aligned_cols=29 Identities=21% Similarity=0.185 Sum_probs=25.0
Q ss_pred CeEEEEeCCcchhHHHHHHHcccCCeEEE
Q 017496 60 PSLLVFSGGTAFNGVVEELKNITTRVAHV 88 (370)
Q Consensus 60 pkIVv~sGGTG~~~LlrgLk~~~~~iT~I 88 (370)
.+|+|+|||.+.-..+..|++...+++.|
T Consensus 7 ~dVvIIGaG~aGl~aA~~l~~~G~~V~li 35 (482)
T 1ojt_A 7 YDVVVLGGGPGGYSAAFAAADEGLKVAIV 35 (482)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEE
Confidence 57999999999999999999987775544
Done!