Your job contains 1 sequence.
>017497
MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA
VFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK
RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDY
IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ
NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLT
AFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPS
GFTSNLCSFN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017497
(370 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 426 3.7e-46 3
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 395 2.5e-39 2
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 418 3.7e-39 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 402 1.9e-37 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 401 2.4e-37 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 390 3.5e-36 1
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 389 4.4e-36 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 381 3.1e-35 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 381 3.1e-35 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 380 4.0e-35 1
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 378 6.5e-35 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 374 1.7e-34 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 369 5.8e-34 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 357 1.1e-32 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 355 1.8e-32 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 355 1.8e-32 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 354 2.3e-32 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 353 2.9e-32 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 351 4.7e-32 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 346 1.6e-31 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 341 5.4e-31 1
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 332 4.9e-30 1
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 330 7.9e-30 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 329 1.0e-29 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 329 1.0e-28 1
TAIR|locus:2076581 - symbol:AT3G57800 "AT3G57800" species... 218 1.6e-28 2
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 314 3.9e-28 1
UNIPROTKB|Q6Z1F9 - symbol:OSJNBa0033D24.39 "BHLH transcri... 228 7.9e-24 2
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 239 3.5e-20 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 242 9.8e-20 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 224 1.4e-18 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 224 1.4e-18 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 224 1.4e-18 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 224 7.9e-18 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 217 2.4e-17 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 206 1.1e-16 1
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 205 2.0e-16 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 204 3.2e-15 1
UNIPROTKB|Q69WX7 - symbol:P0417G12.19 "Basic helix-loop-h... 182 3.8e-14 1
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 186 1.2e-12 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 150 1.9e-12 2
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 165 4.1e-12 1
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 185 4.7e-12 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 180 1.1e-11 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 172 1.5e-11 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 175 1.8e-11 1
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 179 2.5e-11 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 168 5.6e-11 1
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 168 6.2e-11 1
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 166 4.7e-10 1
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 146 5.3e-10 2
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 146 6.1e-10 1
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 164 7.2e-10 1
TAIR|locus:2041369 - symbol:PIL1 "phytochrome interacting... 165 7.8e-10 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 165 7.8e-10 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 161 1.0e-09 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 163 1.2e-09 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 160 1.5e-09 1
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 159 1.6e-09 1
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 155 2.0e-09 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 149 2.2e-09 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 161 2.6e-09 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 159 3.1e-09 1
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 152 3.7e-09 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 159 4.3e-09 1
UNIPROTKB|Q2QMM0 - symbol:LOC_Os12g40710 "Helix-loop-heli... 154 4.3e-09 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 160 5.4e-09 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 157 7.9e-09 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 153 9.9e-09 1
UNIPROTKB|Q8W5G3 - symbol:OSJNBa0002J24.23 "Helix-loop-he... 152 1.3e-08 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 145 2.1e-08 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 146 2.6e-08 1
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 145 2.7e-08 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 146 2.9e-08 1
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 141 6.9e-08 1
UNIPROTKB|Q2QMN2 - symbol:LOC_Os12g40590 "Helix-loop-heli... 142 1.2e-07 1
UNIPROTKB|Q2QML8 - symbol:LOC_Os12g40730 "Helix-loop-heli... 144 2.0e-07 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 143 2.3e-07 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 141 3.8e-07 1
UNIPROTKB|Q5TKP7 - symbol:OJ1362_G11.11 "Putative unchara... 141 5.0e-07 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 137 6.8e-07 1
UNIPROTKB|Q94LR3 - symbol:OSJNBa0010C11.7 "Helix-loop-hel... 129 7.9e-07 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 138 8.2e-07 2
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 131 9.8e-07 1
UNIPROTKB|Q657D1 - symbol:P0697C12.40 "BHLH transcription... 138 1.4e-06 1
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 135 2.0e-06 1
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 131 3.6e-06 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 131 3.6e-06 1
UNIPROTKB|Q651K2 - symbol:B1089G05.30 "BHLH protein-like"... 129 5.9e-06 1
TAIR|locus:2007263 - symbol:AT1G49830 species:3702 "Arabi... 127 6.4e-06 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 129 6.6e-06 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 129 7.2e-06 1
TAIR|locus:2126856 - symbol:IND "AT4G00120" species:3702 ... 120 1.7e-05 1
UNIPROTKB|Q75GI1 - symbol:OSJNBa0013A09.16 "Putative tran... 126 2.0e-05 1
UNIPROTKB|Q2QQ32 - symbol:LOC_Os12g32400 "Helix-loop-heli... 119 2.3e-05 1
TAIR|locus:2179122 - symbol:APTX "APRATAXIN-like" species... 130 2.8e-05 1
UNIPROTKB|Q6Z339 - symbol:B1121A12.20 "Os02g0726700 prote... 124 3.1e-05 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 119 3.7e-05 1
TAIR|locus:2205455 - symbol:BIM2 "AT1G69010" species:3702... 121 5.6e-05 1
TAIR|locus:2199307 - symbol:AT1G68240 species:3702 "Arabi... 111 0.00017 1
WARNING: Descriptions of 6 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 426 (155.0 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 93/153 (60%), Positives = 110/153 (71%)
Query: 122 KNRTNASSSFNSAQSKDPREV----KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE-P 176
K T SSS + S P + K++ +K N N++K E K+ +++ +KE P
Sbjct: 73 KTATTGSSSCDQL-SHGPSAITNTGKTRGRKARNSNNSK--EGVEGRKSKKQKRGSKEEP 129
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P DYIHVRARRGQATDSHSLAERVRREKISERM+ LQ LVPGCDKVTGKA MLDEIINYV
Sbjct: 130 PTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYV 189
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFM 269
Q LQ QVEFLSMKL S++P+ YDFG DLD +
Sbjct: 190 QTLQTQVEFLSMKLTSISPVVYDFGSDLDGLIL 222
Score = 47 (21.6 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 351 DQKQRFLNPSGFTSN-LCSF 369
++++ F++ SGF +N CSF
Sbjct: 266 EERENFVDRSGFNNNNFCSF 285
Score = 39 (18.8 bits), Expect = 3.7e-46, Sum P(3) = 3.7e-46
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 1 MAAFSYQQHHHPFLLD 16
MA FSY Q++ LLD
Sbjct: 1 MATFSYFQNYPHSLLD 16
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 395 (144.1 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 87/153 (56%), Positives = 107/153 (69%)
Query: 119 KKRKNRTNASS---SFNSAQSKDPRE--VKSKKQKKGNVNDAKKEEKENSPKAD---SEQ 170
K ++N + +S SF+ K+ + KS ++K G +++++E + + S
Sbjct: 229 KSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNN 288
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC+KVTGKA MLD
Sbjct: 289 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 348
Query: 231 EIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
EIINYVQ LQ QVEFLSMKL+SVN DF +D
Sbjct: 349 EIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
Score = 41 (19.5 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 33 PPKFPTHDDHQE 44
PP+ TH +HQ+
Sbjct: 14 PPEMATHFEHQQ 25
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
Identities = 90/146 (61%), Positives = 104/146 (71%)
Query: 130 SFNSAQSKDPREVKSKKQKKGNVNDAKKEEK----------ENSPKADSEQKVAKEPPKD 179
S S Q D KS+K K+ NV EEK ++ K +++ EPP
Sbjct: 117 SLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAGGEPPAG 176
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGKA MLDEII+YVQ L
Sbjct: 177 YIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSL 236
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLD 265
QNQVEFLSMKLAS++P+ Y+FG +D
Sbjct: 237 QNQVEFLSMKLASLSPLMYEFGPGID 262
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/152 (61%), Positives = 114/152 (75%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSP--KADS--EQ-KV 172
KKRK N + +AQS R +S+++ N ++ + +E+ NSP K++S +Q K
Sbjct: 236 KKRKR--NGQKNSEAAQSH--RSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQ 291
Query: 173 AKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
+ +PPKD YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDE
Sbjct: 292 SSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 351
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
IINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 352 IINYVQSLQRQVEFLSMKLATVNPQM-DFNLE 382
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 92/140 (65%), Positives = 105/140 (75%)
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKK-EEKENS-PKA--DSEQKVAK----EPPKDYIHV 183
+S + R+ KSK+ V+ +K+ EEKE+S PK SE+ K +P KDYIHV
Sbjct: 199 SSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHV 258
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QV
Sbjct: 259 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 318
Query: 244 EFLSMKLASVNPMFYDFGMD 263
EFLSMKL+SVN DF MD
Sbjct: 319 EFLSMKLSSVNTRL-DFNMD 337
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 390 (142.3 bits), Expect = 3.5e-36, P = 3.5e-36
Identities = 90/154 (58%), Positives = 106/154 (68%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE---QKVAKEP--PKDYI 181
ASSS ++ SK E K K + D K K DS+ + AK P PKDYI
Sbjct: 130 ASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPKDYI 189
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+++TGKA MLDEIINYVQ LQ
Sbjct: 190 HVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQR 249
Query: 242 QVEFLSMKLASVNP-MFYDFGMDLDNTFMVRPDD 274
QVEFLSMKLA+VNP M ++ L +T M++P +
Sbjct: 250 QVEFLSMKLATVNPRMEFNANASL-STEMIQPGE 282
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 95/151 (62%), Positives = 105/151 (69%)
Query: 118 DKKRK---NRTNASSSFNSAQSKDPREVK-SKKQKKGNVNDAKKEEKENSPKADSEQKVA 173
+KK+K NR + +SK + S K K + AKKEE N+ DS KV
Sbjct: 105 EKKKKMTMNRDDLVEEGEEEKSKITEQNNGSTKSIKKMKHKAKKEE--NNFSNDSS-KVT 161
Query: 174 KEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPGCDK+TGKA MLDEI
Sbjct: 162 KELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEI 221
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
INYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 222 INYVQSLQRQIEFLSMKLAIVNPR-PDFDMD 251
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 85/143 (59%), Positives = 102/143 (71%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
R ++ N+A ++ + K+ + N KK+ K++S K EPPKDYIHV
Sbjct: 226 RCKSTEESNAAAEENSGKGKAAQSNSEN-GGGKKQGKDSSSKPP-------EPPKDYIHV 277
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ QV
Sbjct: 278 RARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQV 337
Query: 244 EFLSMKLASVNPMFYDFGMDLDN 266
EFLSMKLA+VNP DF +L N
Sbjct: 338 EFLSMKLATVNPQL-DFN-NLPN 358
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 81/121 (66%), Positives = 95/121 (78%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK--EPPKDYIHVRARRGQATDSHSLAER 199
VK K ++ G+ D+ E+ + + K AK EPPKDY+HVRARRGQATDSHSLAER
Sbjct: 163 VKPKAEQAGS--DSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAER 220
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD 259
VRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP+ D
Sbjct: 221 VRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPL--D 278
Query: 260 F 260
F
Sbjct: 279 F 279
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 90/150 (60%), Positives = 100/150 (66%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENS-PKADSEQKVAKE-- 175
KKRK R+ A+ + QK N +D K E K +S S K K+
Sbjct: 194 KKRK-RSGQDGGVKHAEGGEQLATVGSAQK--NEDDEKGEPKRSSVASGKSSGKQIKDNA 250
Query: 176 --PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
P +DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEII
Sbjct: 251 GSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEII 310
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
NYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 311 NYVQSLQRQVEFLSMKLASVNPTL-DFNIE 339
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
Identities = 84/134 (62%), Positives = 97/134 (72%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 133
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 194 RQVEFLSMKLEAVN 207
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 80/129 (62%), Positives = 99/129 (76%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSL 196
+DP+ + QKK + ND KE N + SE+ P ++YIH+RARRGQAT+SHSL
Sbjct: 166 EDPQRGNDQSQKK-HKNDQSKETV-NKESSQSEEA----PKENYIHMRARRGQATNSHSL 219
Query: 197 AERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPM 256
AERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 220 AERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP- 278
Query: 257 FYDFGMDLD 265
+ +D+D
Sbjct: 279 --EINIDID 285
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 80/129 (62%), Positives = 100/129 (77%)
Query: 144 SKKQKK-GN---VNDAKKEEKENSPKADSEQKVAKEPPKD-----YIHVRARRGQATDSH 194
SKK+K+ G + KK++ E SP +++ + +++ P D YIH+RARRGQAT+SH
Sbjct: 175 SKKRKRIGKDCEEEEDKKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSH 234
Query: 195 SLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
SLAERVRREKISERMK LQ LVPGCDKVTGKA MLDEIINYVQ LQ Q+EFLSMKL++VN
Sbjct: 235 SLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVN 294
Query: 255 PMFYDFGMD 263
P+ DF ++
Sbjct: 295 PVL-DFNLE 302
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 79/149 (53%), Positives = 101/149 (67%)
Query: 126 NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRA 185
+ASS + + EV S++++ D +K + K DS + +DY+HVRA
Sbjct: 93 SASSRIQNVGDQQT-EVSSQQERISMEEDNQKSCSKMQSKEDSSDGDGTK--EDYVHVRA 149
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC K+TGKA MLDEIINYVQ LQ QVEF
Sbjct: 150 KRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINYVQSLQRQVEF 209
Query: 246 LSMKLASVNP-MFYDFGMDLDNTFMVRPD 273
LSMKLA+VNP + +D L M+ D
Sbjct: 210 LSMKLATVNPELSFDIEQILSKQMMLSQD 238
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 83/144 (57%), Positives = 97/144 (67%)
Query: 155 AKKEEKENSPK---ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
AKK+ + SPK A S V DYIHVRARRGQATDSHSLAERVRRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVR 271
LQ+LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMK+A+ NP+ +F + +++ F R
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVV-NFNI-VEDLFG-R 249
Query: 272 PDDQQNLNXXXXXXXXXPQVQCSP 295
Q N P Q P
Sbjct: 250 QLSQAACNPAALPAMALPMAQVEP 273
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 77/122 (63%), Positives = 87/122 (71%)
Query: 138 DPREVKSKKQKKGNVNDAKKEEKE----NSPKADSEQKVAKEPPK-DYIHVRARRGQATD 192
D + K K N + + E E N+ K+ + EPPK DYIHVRARRGQATD
Sbjct: 86 DSEAKRFKASKSSGDNSSLRTEAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATD 145
Query: 193 SHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
SHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +
Sbjct: 146 SHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 205
Query: 253 VN 254
VN
Sbjct: 206 VN 207
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 82/138 (59%), Positives = 95/138 (68%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPP 177
D+ + + S+ S SKD K ++ N K + K K SE + KE
Sbjct: 194 DQVHSSNLPSDSANESVHSKD----KGEESSPATTNGGKSKGK--GAKETSESQ--KE-- 243
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+YIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 244 -EYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 238 FLQNQVEFLSMKLASVNP 255
LQ QVEFLSMKLA+VNP
Sbjct: 303 SLQRQVEFLSMKLATVNP 320
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 77/134 (57%), Positives = 94/134 (70%)
Query: 126 NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSP-----KADSEQKVAKEPPKDY 180
++SSS N + ++ K + GN + + + E E S KA +EQK EPPKDY
Sbjct: 92 SSSSSGNELKESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKA-TEQKNKPEPPKDY 150
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATD HSLAER RREKISE+M LQ ++PGC+K+ GKA +LDEIINY+Q LQ
Sbjct: 151 IHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQ 210
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL VN
Sbjct: 211 RQVEFLSMKLEVVN 224
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 82/154 (53%), Positives = 98/154 (63%)
Query: 125 TNASSSFNSA--QSKDPREVKS-KKQKKGNVNDAKKEE----KENSPKADSEQKVAKEPP 177
T+A+S Q D E K K K + ND+ + E NS KA + EPP
Sbjct: 62 TSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPP 121
Query: 178 K-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
K DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 181
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMV 270
Q LQ+QVEF+ L + F ++ N+ M+
Sbjct: 182 QSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMI 215
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 75/134 (55%), Positives = 95/134 (70%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD-SEQKVAKEPPK-DYI 181
+ N S + Q+K E K++K++K + + E K++ S + + E K DYI
Sbjct: 80 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYI 139
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 140 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 199
Query: 242 QVEFLSMKLASVNP 255
QVEFLSMKL+ +NP
Sbjct: 200 QVEFLSMKLSVINP 213
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 72/142 (50%), Positives = 102/142 (71%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKG-NVNDAKKEEKENSPKADSEQ-KVAKEPPK-DYI 181
+N ++ + ++ +P E S + + + + K++E+E K+ +++ K + E K Y+
Sbjct: 125 SNPGANLDRVKA-EPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYV 183
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ LQ
Sbjct: 184 HVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQR 243
Query: 242 QVEFLSMKLASVNPMFYDFGMD 263
QVE LSM+LA+VNP DF +D
Sbjct: 244 QVEMLSMRLAAVNPRI-DFNLD 264
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 76/141 (53%), Positives = 91/141 (64%)
Query: 119 KKRKNRTNASSSF---NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE 175
KKR++ A + ++A + E + K G V K A E
Sbjct: 108 KKRRSDEIAGTDHANASNALADSGNETECSKDVNGEVIGPPATAAAGGKSKGKGAKDAGE 167
Query: 176 PPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
K+ Y HVRAR+GQAT++HSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIIN
Sbjct: 168 AQKEGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIIN 227
Query: 235 YVQFLQNQVEFLSMKLASVNP 255
YVQ LQ QVEFLSMKL++VNP
Sbjct: 228 YVQSLQRQVEFLSMKLSAVNP 248
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 76/147 (51%), Positives = 94/147 (63%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK 178
KKRK+ A S+ ++ S D S Q N N + K K ++ KE +
Sbjct: 86 KKRKSLMEAVSTSENSVS-DQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKE--R 142
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
+ +HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEIINYVQ
Sbjct: 143 EVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQS 202
Query: 239 LQNQVEFLSMKLASVNPMFYDFGMDLD 265
LQNQVEFLSMKL + + +YDF + D
Sbjct: 203 LQNQVEFLSMKLTAASS-YYDFNSETD 228
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 70/126 (55%), Positives = 89/126 (70%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K++ G+ K+ E+E + D QK PKD +HVRA+RGQATDSHSLAERVRR
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQK-----PKDVVHVRAKRGQATDSHSLAERVRR 123
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG- 261
EKI+ER+K LQ LVPGC K G A MLD II+YV+ LQNQ+EFLSMKL++ + YD
Sbjct: 124 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASAC-YDLNS 182
Query: 262 MDLDNT 267
+D++ T
Sbjct: 183 LDIEPT 188
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 329 (120.9 bits), Expect = 1.0e-28, P = 1.0e-28
Identities = 75/143 (52%), Positives = 96/143 (67%)
Query: 130 SFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-------YIH 182
S N + K + K K +G+ + +EE P+ + + A E D Y+H
Sbjct: 568 SRNMSIDKCLKGSKRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVH 627
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGKA MLDEIINYVQ LQ Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 243 VEFLSMKLASVNPMFYDFGMDLD 265
VEFLSMKL++++P + DLD
Sbjct: 688 VEFLSMKLSTISP---ELNSDLD 707
>TAIR|locus:2076581 [details] [associations]
symbol:AT3G57800 "AT3G57800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AL049660 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000037005 ProtClustDB:CLSN2680198
EMBL:AF488593 EMBL:AL132977 EMBL:AY139773 EMBL:BT003037
EMBL:AY085849 IPI:IPI00532305 IPI:IPI00535946 PIR:T46002
RefSeq:NP_567057.2 RefSeq:NP_850745.1 UniGene:At.34797
ProteinModelPortal:Q3EAI1 EnsemblPlants:AT3G57800.1 GeneID:825530
KEGG:ath:AT3G57800 TAIR:At3g57800 eggNOG:NOG254513
InParanoid:Q3EAI1 OMA:MVASANL PhylomeDB:Q3EAI1
Genevestigator:Q3EAI1 Uniprot:Q3EAI1
Length = 426
Score = 218 (81.8 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 144 SKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRRE 203
++ + G D +K+ K ++ K S ++ K P Y+HVRARRGQATDSHSLAER RRE
Sbjct: 168 NQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLP---YVHVRARRGQATDSHSLAERARRE 224
Query: 204 KISERMKILQKLVPGCDKVT 223
KI+ RMK+LQ+LVPGCDK T
Sbjct: 225 KINARMKLLQELVPGCDKGT 244
Score = 126 (49.4 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
++ G A +LDEIIN+VQ LQ QVE LSM+LA+VNP DF +D
Sbjct: 289 RIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRI-DFNLD 330
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 74/147 (50%), Positives = 95/147 (64%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK 178
KKRK SS ++ D V + + G++ K+ +K+ + + E++V
Sbjct: 91 KKRKALLPTLSSSETSGVSDNTNVIATET--GSLRRGKRLKKKKEEEDEKEREV------ 142
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ
Sbjct: 143 --VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQS 200
Query: 239 LQNQVEFLSMKLASVNPMFYDFGMDLD 265
LQNQVEFLSMKL + + FYDF + D
Sbjct: 201 LQNQVEFLSMKLTAASS-FYDFNSETD 226
>UNIPROTKB|Q6Z1F9 [details] [associations]
symbol:OSJNBa0033D24.39 "BHLH transcription factor-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 GO:GO:0005634
EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP005439
EMBL:AP004464 RefSeq:NP_001062365.1 UniGene:Os.89290 GeneID:4346166
KEGG:osa:4346166 Uniprot:Q6Z1F9
Length = 143
Score = 228 (85.3 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 43/57 (75%), Positives = 51/57 (89%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
M++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FGMD D
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSD 57
Score = 60 (26.2 bits), Expect = 7.9e-24, Sum P(2) = 7.9e-24
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 329 QGQRPNALIYQDNGNSLLWDV-EDQKQRFLNPSGFTSNLCSF 369
Q Q QDNG+ L+ V E ++Q LN F +N+CSF
Sbjct: 102 QSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVF-NNMCSF 142
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 53/102 (51%), Positives = 70/102 (68%)
Query: 150 GNVNDAKKEEKENSPKADSEQKVA---KEPPKDYIHVRARRGQATDSHSLAERVRREKIS 206
G +N + + + P+A + PP+ +RARRGQATD HS+AER+RRE+I+
Sbjct: 102 GLMNQQGQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIA 161
Query: 207 ERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LSM
Sbjct: 162 ERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 202
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 242 (90.2 bits), Expect = 9.8e-20, P = 9.8e-20
Identities = 63/121 (52%), Positives = 75/121 (61%)
Query: 129 SSFNSAQS-KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARR 187
+SFN+ QS + P E K G E PK + PK VRARR
Sbjct: 264 ASFNATQSHRQPAEACGGKNG-GAAPFVNLSEV--LPKGNGSGSAGNGAPKP--RVRARR 318
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HS+AER+RREKIS+RMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LS
Sbjct: 319 GQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQVKVLS 377
Query: 248 M 248
M
Sbjct: 378 M 378
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 122 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 180
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LSM
Sbjct: 181 ILDYVKFLRLQVKVLSM 197
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/76 (65%), Positives = 60/76 (78%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEI
Sbjct: 120 ATAQPQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEI 178
Query: 233 INYVQFLQNQVEFLSM 248
I+YV+FLQ QV+ LSM
Sbjct: 179 IDYVKFLQLQVKVLSM 194
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 50/77 (64%), Positives = 61/77 (79%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V ++ P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 92 VVRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDE 146
Query: 232 IINYVQFLQNQVEFLSM 248
II YV+FLQ QV+ LSM
Sbjct: 147 IIEYVRFLQLQVKVLSM 163
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 224 (83.9 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 50/83 (60%), Positives = 63/83 (75%)
Query: 164 PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV- 222
P+A + A PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K+
Sbjct: 233 PQAGAAGGGAPAPPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLM 290
Query: 223 -TGKAFMLDEIINYVQFLQNQVE 244
T KA MLDEII+YV+FLQ QV+
Sbjct: 291 QTDKASMLDEIIDYVKFLQLQVK 313
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 217 (81.4 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 48/65 (73%), Positives = 54/65 (83%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 298
Query: 244 EFLSM 248
+ LSM
Sbjct: 299 KVLSM 303
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 42/66 (63%), Positives = 57/66 (86%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 205 VKVLSM 210
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 205 (77.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 42/66 (63%), Positives = 57/66 (86%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 203 VKVLSM 208
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 204 (76.9 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 47/121 (38%), Positives = 77/121 (63%)
Query: 143 KSK-KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
KS+ + +K NV+D K++E+E + ++E + + +R +A + H+L+ER R
Sbjct: 237 KSEIEPEKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKR 296
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
R++I+ERMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++ +SM + PM Y G
Sbjct: 297 RDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSMGCGMM-PMMYP-G 353
Query: 262 M 262
M
Sbjct: 354 M 354
>UNIPROTKB|Q69WX7 [details] [associations]
symbol:P0417G12.19 "Basic helix-loop-helix protein-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 GO:GO:0005634 Gene3D:4.10.280.10
EMBL:AP003626 EMBL:AP003711 EMBL:AK070970
EnsemblPlants:LOC_Os06g41060.1 OMA:KNGMDLE Uniprot:Q69WX7
Length = 154
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 38/58 (65%), Positives = 48/58 (82%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
M++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG LDN
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG-GLDN 56
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 186 (70.5 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 58/164 (35%), Positives = 87/164 (53%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKK-------EEKENSPKADS 168
R++K+ + S N + ++ E K KK+K G + + EE+ N D
Sbjct: 186 RVNKRAQKNVEMSGDNNEGEEEEG-ETKLKKRKNGAMMSRQNSSTTFCTEEESNCADQDG 244
Query: 169 --EQKVAKEP-PKDYIHV----RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
E +KE P +++ RA RG ATD SL R RRE+I+ER++ILQ LVP K
Sbjct: 245 GGEDSSSKEDDPSKALNLNGKTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK 304
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMK-LASVNPMFYDFGMDL 264
V ML+E ++YV+FLQ Q++ LS L P+ ++ GMD+
Sbjct: 305 VDIST-MLEEAVHYVKFLQLQIKLLSSDDLWMYAPIAFN-GMDI 346
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 150 (57.9 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LSM
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 298
Score = 81 (33.6 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERV 200
A PP+ RARRGQATD HS+AERV
Sbjct: 204 AAAPPRQ--RQRARRGQATDPHSIAERV 229
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 165 (63.1 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 40/88 (45%), Positives = 57/88 (64%)
Query: 164 PKADSEQKVAKE--PPKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
PK SE ++ +D + +RA+RG AT S+AERVRR +ISER++ LQ+LVP
Sbjct: 46 PKTSSEMAAIEKFLQFQDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNM 105
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLS 247
DK T A MLD ++Y++ LQ QV+ L+
Sbjct: 106 DKQTNTADMLDLAVDYIKDLQKQVKGLN 133
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 185 (70.2 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 46/144 (31%), Positives = 79/144 (54%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE 175
R K+ T A +S++ + V+ + +++ + + KK E+ + +E+
Sbjct: 293 RRGKEVATET-AGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQGTEEAHGST 351
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
K R +A D H+L+ER RRE+I+ERMK LQ+L+P C K T K ML+++I Y
Sbjct: 352 SRK--------RSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEY 402
Query: 236 VQFLQNQVEFLSMKLASVNPMFYD 259
V+ LQ Q++ +SM + PM ++
Sbjct: 403 VKSLQLQIQMMSMGHGMMPPMMHE 426
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 180 (68.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 40/118 (33%), Positives = 66/118 (55%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
E + +++ D E K + + + + E +D ++R +A H L+ER
Sbjct: 231 ETEPVQRQPATETDITDERKRKTREETNVENQGTEEARD--STSSKRSRAAIMHKLSERR 288
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+ LQ+Q++ SM + PM Y
Sbjct: 289 RRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQMFSMGHVMIPPMMY 345
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 172 (65.6 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 55/154 (35%), Positives = 79/154 (51%)
Query: 117 MDKKRKNRTNASSSFNS---AQSKDPREVKSKKQK--KGNVNDAKKEEKENSPKADSEQK 171
+D + +TN++ A+SK + V S+ + N N + NS D +
Sbjct: 101 LDVENLCKTNSNCDVTRQELAKSKKKQRVSSESNTVDESNTNWVDGQSLSNSSD-DEKAS 159
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V K RA +G ATD SL R RREKI+ER+K LQ LVP KV ML+E
Sbjct: 160 VTSVKGK----TRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVDIST-MLEE 214
Query: 232 IINYVQFLQNQVEFLSMK-LASVNPMFYDFGMDL 264
++YV+FLQ Q++ LS L P+ Y+ G+D+
Sbjct: 215 AVHYVKFLQLQIKLLSSDDLWMYAPLAYN-GLDM 247
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 175 (66.7 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 51/146 (34%), Positives = 75/146 (51%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
+T S A+ K ++ K +K +V + + S Q+VA
Sbjct: 157 QTRGSKCARKAEPKRAKKAKQTVEKDASVAIPNGSCSISDNDSSSSQEVADAGATSKGKS 216
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER+K LQ LVP KV ML+E ++YV+FLQ Q+
Sbjct: 217 RAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVDIST-MLEEAVHYVKFLQLQI 275
Query: 244 EFLSM-KLASVNPMFYD---FGMDLD 265
+ LS ++ P+ Y+ G+DL+
Sbjct: 276 KLLSSDEMWMYAPIAYNGMNIGLDLN 301
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 179 (68.1 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 48/136 (35%), Positives = 79/136 (58%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKD-PREVKSK--KQKKGNVNDAKKEEKENSPKADSEQKV 172
R D++ + SS S S D P E S K+K N+ D ++ ++ +K
Sbjct: 271 RKDQESEKAV-VCSSVGSGNSLDGPSESPSLSLKRKHSNIQDIDCHSEDVEEESGDGRKE 329
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A P + + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE
Sbjct: 330 AG-PSRTGLG--SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEA 385
Query: 233 INYVQFLQNQVEFLSM 248
I Y++ LQ QV+ +SM
Sbjct: 386 IEYLKSLQLQVQIMSM 401
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 168 (64.2 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ+Q
Sbjct: 181 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQSQ 240
Query: 243 VEFLS 247
++ L+
Sbjct: 241 IQELT 245
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 168 (64.2 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ Q
Sbjct: 184 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQRQ 243
Query: 243 VEFLS 247
++ L+
Sbjct: 244 IQELT 248
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 166 (63.5 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 42/85 (49%), Positives = 53/85 (62%)
Query: 164 PKA--DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
PK+ D EQ ++ P +RA+RG AT S+AERVRR KISERM+ LQ LVP D
Sbjct: 286 PKSLSDIEQLLSDSIP---CKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDT 342
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFL 246
T A MLD + Y++ LQ QV+ L
Sbjct: 343 QTNTADMLDLAVQYIKDLQEQVKAL 367
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 146 (56.5 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T + MLD +++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 243 VEFL 246
++ L
Sbjct: 194 LQTL 197
Score = 41 (19.5 bits), Expect = 5.3e-10, Sum P(2) = 5.3e-10
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKE 158
+SSS N+ + K P S +Q G ++ ++
Sbjct: 2 SSSSNNNKKMKAPLSFASSRQGSGGLSQISED 33
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 146 (56.5 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++ LQ Q++
Sbjct: 10 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 68
Query: 246 LSM 248
L M
Sbjct: 69 LVM 71
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 164 (62.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 243 VEFLSMKLASVNPM 256
+ L+ A+ M
Sbjct: 339 YKILNDNRANCKCM 352
>TAIR|locus:2041369 [details] [associations]
symbol:PIL1 "phytochrome interacting factor 3-like 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0010017 "red or far-red light
signaling pathway" evidence=IEP;IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 EMBL:AC004411 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010017 GO:GO:0009641 HOGENOM:HOG000115543
ProtClustDB:CLSN2680935 EMBL:AB090873 EMBL:AY219127 EMBL:AY954840
IPI:IPI00545843 PIR:T02190 RefSeq:NP_182220.2 UniGene:At.36425
ProteinModelPortal:Q8L5W8 SMR:Q8L5W8 IntAct:Q8L5W8 STRING:Q8L5W8
PRIDE:Q8L5W8 EnsemblPlants:AT2G46970.1 GeneID:819311
KEGG:ath:AT2G46970 TAIR:At2g46970 eggNOG:NOG291407
InParanoid:Q8L5W8 OMA:MELVCEN PhylomeDB:Q8L5W8
Genevestigator:Q8L5W8 Uniprot:Q8L5W8
Length = 416
Score = 165 (63.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 46/134 (34%), Positives = 73/134 (54%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
+SS F+ S+D S K+K G++ + + N+ +D E AK +H R R
Sbjct: 169 SSSKFSRGTSRD-LSCCSLKRKYGDIEEEESTYLSNN--SDDESDDAKTQ----VHARTR 221
Query: 187 -----RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
R ++T+ H L ER RR++ +++M+ LQ L+P C K KA +LDE I Y++ LQ
Sbjct: 222 KPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQL 280
Query: 242 QVEFLSMKLASVNP 255
QV+ +SM + P
Sbjct: 281 QVQMMSMGNGLIRP 294
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 165 (63.1 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 39/91 (42%), Positives = 57/91 (62%)
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T KA
Sbjct: 206 DSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKA 264
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
+LDE I Y++ LQ QV+ + M V MF
Sbjct: 265 SILDEAIEYLKSLQMQVQIMWMTTGIVPMMF 295
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 161 (61.7 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/78 (44%), Positives = 53/78 (67%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV-E 244
+R +A + H+LAER RREKI+ERMK LQ+L+P C+K T K ML+++I YV+ L+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 245 FLSMKLASVN--PMFYDF 260
F+ +N P + F
Sbjct: 206 FMPHMAMGMNQPPAYIPF 223
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 163 (62.4 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/92 (44%), Positives = 55/92 (59%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 243 VEFLS-MKLASVN-PMFYDFGMDLDNTFMVRP 272
V +S M + S+ PM L + M P
Sbjct: 266 VSMMSRMNMPSMMLPMAMQQQQQLQMSLMSNP 297
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 160 (61.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 35/74 (47%), Positives = 52/74 (70%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 245 FLSMKLAS-VNPMF 257
LSM+ +NP +
Sbjct: 158 MLSMRNGVYLNPSY 171
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 159 (61.0 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/88 (40%), Positives = 55/88 (62%)
Query: 165 KADSEQKVAK---EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
+ +SE+ + E P R +R +A + H+L+E+ RR +I+E+MK LQ L+P K
Sbjct: 5 RCESEEALGSSESEQPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK 64
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMK 249
T KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 65 -TDKASMLDDAIEYLKQLQLQVQMLSMR 91
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 155 (59.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
+TD S+A R+RRE+ISER++ILQ+LVPG K+ A MLDE I+YV+FL+ QV+ L +
Sbjct: 158 STDPQSVAARMRRERISERIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-R 215
Query: 250 LASVN 254
A+ N
Sbjct: 216 AAAAN 220
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 149 (57.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 253 VNPM 256
+NPM
Sbjct: 157 LNPM 160
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 161 (61.7 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 43/136 (31%), Positives = 75/136 (55%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSP---KADSEQKV 172
R+D + S N+ ++ V +++K +V DA +E S + +Q +
Sbjct: 183 RLDTSSGGSSGCSYGRNNKETVSGTSVTIDRKRK-HVMDADQESVSQSDIGLTSTDDQTM 241
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
+ + RR +A + H+L+ER RR++I+ERMK LQ+L+P C + T KA +LDE
Sbjct: 242 GNKSSQR--SGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEA 298
Query: 233 INYVQFLQNQVEFLSM 248
I+Y++ LQ Q++ + M
Sbjct: 299 IDYLKSLQMQLQVMWM 314
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 159 (61.0 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 45/121 (37%), Positives = 65/121 (53%)
Query: 132 NSAQ--SKDPREVKSKKQKKGNVNDAKKEEKENSPKAD-SEQKVAKEPPKDYIHVRARRG 188
N+ Q S R S GN D E E +A E +K P ++R
Sbjct: 139 NNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGGEAVVDEAPSSKSGPSS--RSSSKRC 196
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 249 K 249
+
Sbjct: 256 R 256
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 152 (58.6 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/80 (48%), Positives = 54/80 (67%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PPK +VR + D S+A R+RRE+ISER++ILQ+LVPG K+ A MLDE
Sbjct: 136 AVRPPKRR-NVRISK----DPQSVAARLRRERISERIRILQRLVPGGTKMD-TASMLDEA 189
Query: 233 INYVQFLQNQVEFLSMKLAS 252
I+YV+FL++QV+ L A+
Sbjct: 190 IHYVKFLKSQVQSLERAAAA 209
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 159 (61.0 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 41/130 (31%), Positives = 72/130 (55%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK 178
+++ N +SSS S+ +++K + D K++ ++ ++ S
Sbjct: 188 EEKLNPNASSSSGGSSGCSFGKDIKEMASGRCITTDRKRKRINHTDESVSLSDAIGNKSN 247
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
RR +A + H+L+ER RR++I+ERMK LQ+L+P C K T KA +LDE I+Y++
Sbjct: 248 QRSGSN-RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKS 305
Query: 239 LQNQVEFLSM 248
LQ Q++ + M
Sbjct: 306 LQLQLQVMWM 315
>UNIPROTKB|Q2QMM0 [details] [associations]
symbol:LOC_Os12g40710 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 Gramene:Q2QMM0 Uniprot:Q2QMM0
Length = 266
Score = 154 (59.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 42/126 (33%), Positives = 67/126 (53%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVND--AKKEEKENSPKA--DS-EQKVAKEPPKDYI 181
A+ + S ++ D R +K +++ A N +A DS E+K K+
Sbjct: 15 AAGGWLSPEAGDDRRAAPPAPEKKQMDNMPAVASPTMNKDEASDDSGERKKKKKKASSAA 74
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
+R A +H+L E+ RR KI+ER + LQ+LVPGCD + +A LD+ I Y++ LQ+
Sbjct: 75 GKASRHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQH 134
Query: 242 QVEFLS 247
Q+E S
Sbjct: 135 QLEATS 140
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 160 (61.4 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 44/140 (31%), Positives = 77/140 (55%)
Query: 125 TNASSSFNSAQSKDP-REVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
T++ S N A S + R+ K K Q + + ++ ++ ++ P + K +
Sbjct: 257 TSSVCSGNGAGSDELWRQQKRKCQAQAECSASQDDDLDDEPGV-----LRKSGTRS---- 307
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV
Sbjct: 308 -TKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQV 365
Query: 244 EFLSMKLA-SVNPMFYDFGM 262
+ +SM + PM M
Sbjct: 366 QMMSMGTGLCIPPMLLPTAM 385
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 157 (60.3 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 40/107 (37%), Positives = 61/107 (57%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRA----RRGQATDSHSLA 197
V++ V A+ E + P +S+ K A+E R +R + + H+LA
Sbjct: 205 VEAAGTPSSGVCKAETEPVQIQPATESKLK-AREETHGTEEARGSTSRKRSRTAEMHNLA 263
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ER RREKI+E+MK LQ+L+P C+K T K LD+ I YV+ LQ+Q++
Sbjct: 264 ERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQ 309
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 153 (58.9 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 51/155 (32%), Positives = 80/155 (51%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE-----KENSPKADSEQ 170
R+D + K+R +A A SK ++ + + G++ ++ EN E
Sbjct: 156 RLDDQTKSRKSAKK----AGSKRGKKAAQCEGEDGSIAVTNRQSLSCCTSENDSIGSQES 211
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
VA K ++ ATD SL R RRE+I+ER+KILQ LVP KV ML+
Sbjct: 212 PVAA---KSNGKAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTKVDIST-MLE 267
Query: 231 EIINYVQFLQNQVEFLSM-KLASVNPMFYDFGMDL 264
E ++YV+FLQ Q++ LS ++ P+ Y+ GM++
Sbjct: 268 EAMHYVKFLQLQIKLLSSDEMWMYAPIAYN-GMNI 301
>UNIPROTKB|Q8W5G3 [details] [associations]
symbol:OSJNBa0002J24.23 "Helix-loop-helix DNA-binding
domain containing protein, expressed" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CM000140 HOGENOM:HOG000240244 EMBL:AC090713
EnsemblPlants:LOC_Os03g55550.1 eggNOG:NOG237829 OMA:WIWERRR
Uniprot:Q8W5G3
Length = 310
Score = 152 (58.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 42/123 (34%), Positives = 66/123 (53%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYI 181
K RT A + + K V K+ ++ + + + + N + + +KV +
Sbjct: 150 KRRTQAGHGGDLGRQKKKARVSDKRNQESMQSGSCSDNESNCSQVN-RRKVDRVAGGGNG 208
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
V ARR AT + SL R RRE+I+ R++ILQKLVP KV ML+E ++YV+FLQ
Sbjct: 209 KVPARRRSATIAQSLYARRRRERINGRLRILQKLVPNGTKVDIST-MLEEAVHYVKFLQL 267
Query: 242 QVE 244
Q++
Sbjct: 268 QIK 270
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 145 (56.1 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 39/106 (36%), Positives = 55/106 (51%)
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
D + K+P + + + + D S+A R RRE+ISER++ILQ+LVPG K+ A
Sbjct: 109 DIDPATVKKPKRRNVRI------SDDPQSVAARHRRERISERIRILQRLVPGGTKMD-TA 161
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRP 272
MLDE I YV+FL+ Q+ L+ P D T V P
Sbjct: 162 SMLDEAIRYVKFLKRQIRLLNNNTGYTPPPPQDQASQAVTTSWVSP 207
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 146 (56.5 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A +PPK +VR + D S+A R RRE+ISER++ILQ+LVPG K+ A MLDE
Sbjct: 117 AVKPPKRR-NVRISK----DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEA 170
Query: 233 INYVQFLQNQVEFL 246
I+YV+FL+ QV+ L
Sbjct: 171 IHYVKFLKKQVQSL 184
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 145 (56.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 40/80 (50%), Positives = 54/80 (67%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PPK +VR + D S+A R RRE+ISER++ILQ+LVPG K+ A MLDE I+
Sbjct: 116 KPPKRK-NVRISK----DPQSVAARHRRERISERIRILQRLVPGGTKMD-TASMLDEAIH 169
Query: 235 YVQFLQNQVEFLSMKLASVN 254
YV+FL+ QV+ L + A VN
Sbjct: 170 YVKFLKKQVQSLE-EHAVVN 188
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 146 (56.5 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 48/151 (31%), Positives = 77/151 (50%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE 175
+ KK K +T S S +S+ + E S+ + + E +S A V K+
Sbjct: 94 QQQKKPKKKTRTSRSVSSSSTITDYETSSELVNPSCSSGSSVGE--DSIAATDGSVVLKQ 151
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
H + + D+ SL + RRE+I+ER++ILQ+LVP KV ML+E + Y
Sbjct: 152 SDNSRGHKQCSK----DTQSLYAKRRRERINERLRILQQLVPNGTKVDIST-MLEEAVQY 206
Query: 236 VQFLQNQVEFLSMKLASV-NPMFYDFGMDLD 265
V+FLQ Q++ LS + P+ Y+ GM++D
Sbjct: 207 VKFLQLQIKLLSSDDTWMFAPLAYN-GMNMD 236
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 141 (54.7 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
+A RG A+D SL R RRE+I++R+K LQ LVP KV ML++ ++YV+FLQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVDIST-MLEDAVHYVKFLQLQI 191
Query: 244 EFLSMK-LASVNPMFYD-FGMDLDNTFMVR 271
+ LS + L P+ ++ M L + + R
Sbjct: 192 KLLSSEDLWMYAPLAHNGLNMGLHHNLLSR 221
>UNIPROTKB|Q2QMN2 [details] [associations]
symbol:LOC_Os12g40590 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 EMBL:CM000149 eggNOG:NOG272270
KEGG:dosa:Os12t0597800-01 Uniprot:Q2QMN2
Length = 265
Score = 142 (55.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 37/106 (34%), Positives = 63/106 (59%)
Query: 156 KKEEKEN-SPKADSEQKVAKEPPKDYIHVRARRGQA-TDSHSLAERVRREKISERMKILQ 213
KK + E + K D + E + H +ARR ++H L E+ RR +I+E+ K+LQ
Sbjct: 118 KKPDGEPLTEKMDKKLPTRTEERRRVKH-KARRNPGYAETHGLTEKRRRSRINEKFKMLQ 176
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL---SMKLASVNPM 256
+LVPGCDK + ++ LD I+Y++ LQ Q++ + ++ A+V P+
Sbjct: 177 RLVPGCDKCS-QSSTLDRTIHYMKSLQQQLQAMYPTMVRPAAVYPV 221
>UNIPROTKB|Q2QML8 [details] [associations]
symbol:LOC_Os12g40730 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:DP000011 KEGG:dosa:Os12t0599400-00
KEGG:dosa:Os12t0599550-00 Gramene:Q2QML8 HOGENOM:HOG000244163
Uniprot:Q2QML8
Length = 387
Score = 144 (55.7 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPP 177
+KK+ + A++S + +KD S ++KK + A + K+ SP+ + +P
Sbjct: 154 EKKQMEKMPAAASPTTTMNKDETSDDSGERKKKKASSAAGKSKQASPRGCR----SSQPY 209
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+ + G + D RR KI+ER + LQ+LVPGCDK + +A LD+ I Y++
Sbjct: 210 R-------KSGDSIDELFTKFHRRRFKITERFRTLQRLVPGCDK-SNQASTLDQTIQYMK 261
Query: 238 FLQNQVEFLSM 248
LQ+Q++ +S+
Sbjct: 262 SLQHQLKAMSV 272
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 143 (55.4 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 35/107 (32%), Positives = 59/107 (55%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
+S K + D + E EQ+ E + RRG+A H+ +ER RR
Sbjct: 124 RSLKTARTGDRDYFRSGSETQDTEGDEQETRGEAGRS----NGRRGRAAAIHNESERRRR 179
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
++I++RM+ LQKL+P K K +LD++I +++ LQ QV+F+S++
Sbjct: 180 DRINQRMRTLQKLLPTASKAD-KVSILDDVIEHLKQLQAQVQFMSLR 225
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 141 (54.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 235 YVQFLQNQVEFL 246
+++ LQ+Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>UNIPROTKB|Q5TKP7 [details] [associations]
symbol:OJ1362_G11.11 "Putative uncharacterized protein
OJ1362_G11.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC104713 ProteinModelPortal:Q5TKP7
EnsemblPlants:LOC_Os05g46370.1 KEGG:dosa:Os05t0541400-00
Gramene:Q5TKP7 HOGENOM:HOG000238211 Uniprot:Q5TKP7
Length = 416
Score = 141 (54.7 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
A + ++ PP R ++D ++A R+RRE++SER+++LQ+LVPG K+
Sbjct: 280 ASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-T 338
Query: 226 AFMLDEIINYVQFLQNQVEFL 246
A MLDE +Y++FL++Q+E L
Sbjct: 339 ATMLDEAASYLKFLKSQLEAL 359
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 137 (53.3 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 42/123 (34%), Positives = 57/123 (46%)
Query: 126 NASSSFNSAQSKDPREVKSKKQ-KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVR 184
N S SK P K+ G A K++ K + + P
Sbjct: 143 NGLEIHESNVSKPPPPAAKKRACPSGEARAAGKKQCRKGSKPNKAASASSPSPSPSPSPS 202
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+ Q S A +VRRE+ISER+K+LQ LVP KV ML++ INYV+FLQ QV+
Sbjct: 203 PNKEQP---QSAAAKVRRERISERLKVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVK 258
Query: 245 FLS 247
L+
Sbjct: 259 VLA 261
>UNIPROTKB|Q94LR3 [details] [associations]
symbol:OSJNBa0010C11.7 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0003677 EMBL:DP000086 EMBL:AP008216 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC069300 RefSeq:NP_001065353.1
UniGene:Os.27587 IntAct:Q94LR3 STRING:Q94LR3 GeneID:4349351
KEGG:osa:4349351 ProtClustDB:CLSN2714538 Uniprot:Q94LR3
Length = 191
Score = 129 (50.5 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 28/56 (50%), Positives = 41/56 (73%)
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPM 256
RR++I+++MK LQKLVP K T KA MLDE+I+Y++ LQ QV+ +S + + PM
Sbjct: 13 RRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIDYLKQLQAQVQVMSRMGSMMMPM 67
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 138 (53.6 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 27/57 (47%), Positives = 46/57 (80%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++S+R+++LQKLVPG +K+ A MLDE +Y++FL++QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 337
Score = 38 (18.4 bits), Expect = 8.2e-07, Sum P(2) = 8.2e-07
Identities = 5/7 (71%), Positives = 5/7 (71%)
Query: 6 YQQHHHP 12
Y HHHP
Sbjct: 180 YDDHHHP 186
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 131 (51.2 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 31/74 (41%), Positives = 49/74 (66%)
Query: 184 RARRGQA---TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
R RR A ++ S+A R+RRE++S+RM+ LQ+LVPG ++ A ML+E I YV+FL+
Sbjct: 112 RPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPGGARLD-TASMLEEAIRYVKFLK 170
Query: 241 NQVEFLSMKLASVN 254
V+ L A+++
Sbjct: 171 GHVQSLERAAAALH 184
>UNIPROTKB|Q657D1 [details] [associations]
symbol:P0697C12.40 "BHLH transcription-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003141
EMBL:AP003296 Uniprot:Q657D1
Length = 484
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++Q+ L
Sbjct: 371 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 426
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/71 (47%), Positives = 46/71 (64%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV---EFL 246
+TD ++A R RRE+ISE++++LQ LVPG K+ A MLDE NY++FL+ QV E L
Sbjct: 276 STDPQTVAARQRRERISEKIRVLQTLVPGGTKMD-TASMLDEAANYLKFLRAQVKALENL 334
Query: 247 SMKLASVNPMF 257
KL N F
Sbjct: 335 RPKLDQTNLSF 345
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 37/91 (40%), Positives = 52/91 (57%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQAT--------DSHSLAERVRREKISERMKILQKLV 216
+A +E A P K + G+A D SLA + RRE+ISER++ILQ+LV
Sbjct: 171 RAHAESSQAMSPSKKQCGAGRKAGKAKSAPTTPTKDPQSLAAKNRRERISERLRILQELV 230
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
P KV ML++ I+YV+FLQ QV+ L+
Sbjct: 231 PNGTKVD-LVTMLEKAISYVKFLQLQVKVLA 260
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 131 (51.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 31/56 (55%), Positives = 41/56 (73%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
D SLA + RRE+ISER+KILQ+LVP KV ML++ I+YV+FLQ QV+ L+
Sbjct: 204 DPQSLAAKNRRERISERLKILQELVPNGTKVD-LVTMLEKAISYVKFLQVQVKVLA 258
>UNIPROTKB|Q651K2 [details] [associations]
symbol:B1089G05.30 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CM000143 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP005967 EnsemblPlants:LOC_Os06g30090.1 Uniprot:Q651K2
Length = 294
Score = 129 (50.5 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 34/90 (37%), Positives = 52/90 (57%)
Query: 163 SPKADSEQKVAKEPPKDY----IHVRARRGQAT--DSHSLAERVRREKISERMKILQKLV 216
S A Q+ A+ PP +H +++ +A ++ S A + RRE+ISER++ LQ+LV
Sbjct: 163 SAAASGSQRRARPPPSPLQGSELHEYSKKQRANNKETQSSAAKSRRERISERLRALQELV 222
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
P KV MLD I+YV+F+Q Q+ L
Sbjct: 223 PSGGKVD-MVTMLDRAISYVKFMQMQLRVL 251
>TAIR|locus:2007263 [details] [associations]
symbol:AT1G49830 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598
SMART:SM00353 EMBL:CP002684 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00544298 RefSeq:NP_175405.2 UniGene:At.52101
ProteinModelPortal:F4I3E6 SMR:F4I3E6 EnsemblPlants:AT1G49830.1
GeneID:841406 KEGG:ath:AT1G49830 OMA:HETMGYI Uniprot:F4I3E6
Length = 250
Score = 127 (49.8 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 41/134 (30%), Positives = 61/134 (45%)
Query: 123 NRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIH 182
N+ + F S S P S + VND + + AD +V P
Sbjct: 54 NQNDTDLLF-SQPSFSPASPLSSRNNACVVNDQSFRSNKKTGSADGHDRVCDPKPGK--- 109
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
R +R Q S A +V++EK+ E++ LQ LV K T A +L E + Y++FLQ+Q
Sbjct: 110 -RCKRDQKKSSLGNA-KVKKEKVGEKITTLQHLVSPYGK-TDAASVLHETMGYIKFLQDQ 166
Query: 243 VEFLSMKLASVNPM 256
V+ LS NP+
Sbjct: 167 VQVLSTPYFKHNPL 180
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 129 (50.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 30/56 (53%), Positives = 40/56 (71%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
D SLA + RRE+ISER+K+LQ+LVP KV ML++ I YV+FLQ QV+ L+
Sbjct: 210 DPQSLAAKNRRERISERLKVLQELVPNGTKVD-LVTMLEKAIGYVKFLQVQVKVLA 264
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 129 (50.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 42/136 (30%), Positives = 67/136 (49%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENS----PKADSEQK 171
R K+ K N +S+ +S S ++ + D K E S + +QK
Sbjct: 51 RPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVISFGSPDTKTNPVETSLNFSNQVSMDQK 110
Query: 172 VAKEPPKDYIHVRARRG-QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
V + KD ++ RR H LAER RR+K++ER+ L L+PG K T KA +L+
Sbjct: 111 VGSKR-KDCVNNGGRREPHLLKEHVLAERKRRQKLNERLIALSALLPGLKK-TDKATVLE 168
Query: 231 EIINYVQFLQNQVEFL 246
+ I +++ LQ +V+ L
Sbjct: 169 DAIKHLKQLQERVKKL 184
>TAIR|locus:2126856 [details] [associations]
symbol:IND "AT4G00120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010197 "polar nucleus fusion" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161471
GO:GO:0010197 EMBL:AF069299 EMBL:BT029443 EMBL:AF488578
IPI:IPI00532644 PIR:T01340 RefSeq:NP_191923.1 UniGene:At.34598
ProteinModelPortal:O81313 SMR:O81313 IntAct:O81313 STRING:O81313
PRIDE:O81313 EnsemblPlants:AT4G00120.1 GeneID:827911
KEGG:ath:AT4G00120 TAIR:At4g00120 eggNOG:NOG274244
HOGENOM:HOG000113070 InParanoid:O81313 OMA:DWNKAND PhylomeDB:O81313
ProtClustDB:CLSN2916160 Genevestigator:O81313 Uniprot:O81313
Length = 198
Score = 120 (47.3 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D ++ R RRE+ISE+++IL+++VPG K+ A MLDE I Y +FL+ QV L
Sbjct: 121 DPQTVVARRRRERISEKIRILKRIVPGGAKMD-TASMLDEAIRYTKFLKRQVRIL 174
>UNIPROTKB|Q75GI1 [details] [associations]
symbol:OSJNBa0013A09.16 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC145380
EMBL:AC135228 EMBL:AK120539 RefSeq:NP_001051131.1 UniGene:Os.7441
EnsemblPlants:LOC_Os03g51580.1 GeneID:4333965 KEGG:osa:4333965
OMA:DSCITEQ Uniprot:Q75GI1
Length = 359
Score = 126 (49.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/82 (40%), Positives = 45/82 (54%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
K + VA + K +R H LAER RREK+S+R L K+VPG K+
Sbjct: 153 KRSYDAMVAADVAKAPAAAASRPASQNQEHILAERKRREKLSQRFIALSKIVPGLKKMD- 211
Query: 225 KAFMLDEIINYVQFLQNQVEFL 246
KA +L + I YV+ LQ+QV+ L
Sbjct: 212 KASVLGDAIKYVKQLQDQVKGL 233
>UNIPROTKB|Q2QQ32 [details] [associations]
symbol:LOC_Os12g32400 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
eggNOG:NOG284967 Uniprot:Q2QQ32
Length = 198
Score = 119 (46.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM- 248
A S S + RR++I+ER++ILQ+L+P KV ML+E I YV+FL Q++ LS
Sbjct: 115 AESSQSYYAKNRRQRINERLRILQELIPNGTKVDIST-MLEEAIQYVKFLHLQIKLLSSD 173
Query: 249 KLASVNPMFYDFG 261
++ P+ +D G
Sbjct: 174 EMWMYAPLAFDSG 186
>TAIR|locus:2179122 [details] [associations]
symbol:APTX "APRATAXIN-like" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0006790 "sulfur compound metabolic
process" evidence=IDA] [GO:0009150 "purine ribonucleotide metabolic
process" evidence=IDA] [GO:0047627 "adenylylsulfatase activity"
evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR011146
InterPro:IPR011598 InterPro:IPR015880 Pfam:PF00010 PROSITE:PS00028
PROSITE:PS50157 PROSITE:PS50888 PROSITE:PS51084 SMART:SM00353
SMART:SM00355 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 Gene3D:3.30.428.10 InterPro:IPR001310
SUPFAM:SSF54197 PROSITE:PS00892 InterPro:IPR019808 eggNOG:NOG278510
KO:K10863 PANTHER:PTHR12486 GO:GO:0006790 EMBL:AL161746
IPI:IPI00539681 PIR:T48153 RefSeq:NP_195751.1 UniGene:At.54671
ProteinModelPortal:Q9M041 SMR:Q9M041 PRIDE:Q9M041
EnsemblPlants:AT5G01310.1 GeneID:830940 KEGG:ath:AT5G01310
GeneFarm:3073 TAIR:At5g01310 HOGENOM:HOG000083464 InParanoid:Q9M041
OMA:GHEGNLQ PhylomeDB:Q9M041 ProtClustDB:CLSN2687115
BioCyc:ARA:AT5G01310-MONOMER Genevestigator:Q9M041 GO:GO:0047627
GO:GO:0009150 InterPro:IPR002589 Pfam:PF01661 PROSITE:PS51154
Uniprot:Q9M041
Length = 912
Score = 130 (50.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
+TD S+A R RR +IS+R KILQ +VPG K+ + MLDE I+YV+FL+ Q+ +
Sbjct: 44 STDPQSVAARDRRHRISDRFKILQSMVPGGAKMDTVS-MLDEAISYVKFLKAQIWYHQNM 102
Query: 250 LASVN 254
L +N
Sbjct: 103 LLFIN 107
>UNIPROTKB|Q6Z339 [details] [associations]
symbol:B1121A12.20 "Os02g0726700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
EMBL:AP008208 EMBL:AP005284 RefSeq:NP_001047993.1 UniGene:Os.52592
GeneID:4330593 KEGG:osa:4330593 ProtClustDB:CLSN2919237
Uniprot:Q6Z339
Length = 344
Score = 124 (48.7 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 26/62 (41%), Positives = 42/62 (67%)
Query: 185 ARRGQAT--DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
A +G +T HS E+ RR KI++R++IL++L+P D+ KA L E+I Y++FLQ +
Sbjct: 139 ADQGPSTPRSKHSATEQRRRTKINDRLEILRELLPHTDQKRDKASFLSEVIEYIRFLQEK 198
Query: 243 VE 244
V+
Sbjct: 199 VQ 200
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 119 (46.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 184 RARRGQ--ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
R R G +TD S+A R RR +IS+R ++L+ LVPG K+ + ML++ I+YV+FL+
Sbjct: 45 RRRPGAKLSTDPQSVAARERRHRISDRFRVLRSLVPGGSKMDTVS-MLEQAIHYVKFLKT 103
Query: 242 QV 243
Q+
Sbjct: 104 QI 105
>TAIR|locus:2205455 [details] [associations]
symbol:BIM2 "AT1G69010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC011665 EMBL:BT002352 EMBL:AY080650 EMBL:AY086798
EMBL:AF488627 IPI:IPI00519398 PIR:E96714 RefSeq:NP_177064.1
UniGene:At.35458 ProteinModelPortal:Q9CAA4 SMR:Q9CAA4 PaxDb:Q9CAA4
PRIDE:Q9CAA4 EnsemblPlants:AT1G69010.1 GeneID:843233
KEGG:ath:AT1G69010 TAIR:At1g69010 eggNOG:NOG246683
HOGENOM:HOG000070523 InParanoid:Q9CAA4 OMA:YVQYLQE PhylomeDB:Q9CAA4
ProtClustDB:CLSN2682349 Genevestigator:Q9CAA4 GermOnline:AT1G69010
Uniprot:Q9CAA4
Length = 311
Score = 121 (47.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 30/97 (30%), Positives = 50/97 (51%)
Query: 149 KGNVNDAKKEEKE-NSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
KGN + E++ NS + +D + HS+ E+ RR KI+E
Sbjct: 5 KGNQEEEDYGEEDFNSKREGPSSNTTVHSNRDSKE-NDKASAIRSKHSVTEQRRRSKINE 63
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
R +IL++L+P ++ A L E+I+YVQ+LQ +V+
Sbjct: 64 RFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQ 100
>TAIR|locus:2199307 [details] [associations]
symbol:AT1G68240 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0009686 "gibberellin biosynthetic process" evidence=RCA]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC016447
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AJ577585 EMBL:AY735551
EMBL:AY735552 EMBL:AY924719 IPI:IPI00528459 IPI:IPI00657054
IPI:IPI00919318 PIR:H96705 RefSeq:NP_001031251.1 RefSeq:NP_176991.2
UniGene:At.35550 ProteinModelPortal:Q5XVH0 SMR:Q5XVH0
EnsemblPlants:AT1G68240.1 GeneID:843153 KEGG:ath:AT1G68240
TAIR:At1g68240 eggNOG:NOG270610 HOGENOM:HOG000095221 OMA:EGTHEEE
PhylomeDB:Q5XVH0 ProtClustDB:CLSN2681409 Genevestigator:Q5XVH0
Uniprot:Q5XVH0
Length = 185
Score = 111 (44.1 bits), Expect = 0.00017, P = 0.00017
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG-CDKVT 223
K + +K +EP ++ + A+R ++ + + E+ RR++I +++ ILQ L+P C K
Sbjct: 44 KNNDHEKHDEEPDEESYRM-AKRQRSMEYRMMMEKKRRKEIKDKVDILQGLMPNHCTK-P 101
Query: 224 GKAFMLDEIINYVQFLQNQVEFLSMKLASV---NPMFY 258
A L+ II Y++ L+ QV+ +SM + P FY
Sbjct: 102 DLASKLENIIEYIKSLKYQVDVMSMAYTTTPVYTPPFY 139
>TAIR|locus:2204898 [details] [associations]
symbol:HFR1 "AT1G02340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009585 "red, far-red light
phototransduction" evidence=TAS] [GO:0009642 "response to light
intensity" evidence=IEP] [GO:0009785 "blue light signaling pathway"
evidence=TAS] [GO:0003712 "transcription cofactor activity"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009738
"abscisic acid mediated signaling pathway" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009738
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003712
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC064879
GO:GO:0009642 GO:GO:0009785 EMBL:AF288287 EMBL:AF324245
EMBL:AF323182 EMBL:AK117248 IPI:IPI00545685 PIR:G86153
RefSeq:NP_563650.1 UniGene:At.24795 ProteinModelPortal:Q9FE22
SMR:Q9FE22 IntAct:Q9FE22 STRING:Q9FE22 PRIDE:Q9FE22
EnsemblPlants:AT1G02340.1 GeneID:839300 KEGG:ath:AT1G02340
TAIR:At1g02340 eggNOG:NOG274868 HOGENOM:HOG000112891 OMA:FSSHAMR
PhylomeDB:Q9FE22 ProtClustDB:CLSN2916946 Genevestigator:Q9FE22
GermOnline:AT1G02340 Uniprot:Q9FE22
Length = 292
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 31/83 (37%), Positives = 44/83 (53%)
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
R R EK+S +M+ LQ+LVP C K T K +LD+ I Y++ LQ Q++ +S VNP F
Sbjct: 144 RRRDEKMSNKMRKLQQLVPNCHK-TDKVSVLDKTIEYMKNLQLQLQMMST--VGVNPYFL 200
Query: 259 D--FGMDLDNTFMVRPDDQQNLN 279
G + N + LN
Sbjct: 201 PATLGFGMHNHMLTAMASAHGLN 223
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 113 (44.8 bits), Expect = 0.00033, P = 0.00033
Identities = 38/130 (29%), Positives = 58/130 (44%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
K + ++S FNS P +S + +A K +P S KV D
Sbjct: 72 KHQKLIDSSFHFNSHDPFSPSP-ESNYLLDSYITEASNISKFQAPDFSSTFKVGWTEQGD 130
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
+ + + S+A R RR +I+E+ + L KL+PG K A M + YV+FL
Sbjct: 131 ------TKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQK-HNTAEMFNAAAKYVKFL 183
Query: 240 QNQVEFLSMK 249
Q Q+E L +K
Sbjct: 184 QAQIEILQLK 193
>UNIPROTKB|Q69JI7 [details] [associations]
symbol:OSJNBa0026C08.39-1 "BHLH protein family-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008215 EMBL:CM000146 EMBL:EU837261 EMBL:AP006169
EMBL:AP005759 RefSeq:NP_001063459.1 UniGene:Os.16741
EnsemblPlants:LOC_Os09g29930.1 GeneID:4347359 KEGG:osa:4347359
OMA:HNIVTSA ProtClustDB:CLSN2697427 Uniprot:Q69JI7
Length = 504
Score = 117 (46.2 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
R HS E+ RR KI++R +IL++L+P D+ KA L E+I Y++FLQ +V+
Sbjct: 214 RPSSPRSKHSATEQRRRSKINDRFQILRELLPHSDQKRDKATFLLEVIEYIRFLQEKVQ 272
Score = 38 (18.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 6/15 (40%), Positives = 9/15 (60%)
Query: 1 MAAFSYQQHHHPFLL 15
+AA + HHH + L
Sbjct: 121 VAALGHHHHHHQWTL 135
>TAIR|locus:2026629 [details] [associations]
symbol:EGL3 "AT1G63650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009957 "epidermal
cell fate specification" evidence=RCA;IMP] [GO:0001708 "cell fate
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009913 "epidermal cell
differentiation" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR025610 Pfam:PF14215 EMBL:AF251687 EMBL:AF013465
EMBL:AF027732 EMBL:AC011622 IPI:IPI00545374 PIR:D96661
RefSeq:NP_001185302.1 RefSeq:NP_176552.1 RefSeq:NP_974080.1
UniGene:At.25024 ProteinModelPortal:Q9CAD0 SMR:Q9CAD0 IntAct:Q9CAD0
STRING:Q9CAD0 PRIDE:Q9CAD0 EnsemblPlants:AT1G63650.1
EnsemblPlants:AT1G63650.2 EnsemblPlants:AT1G63650.3 GeneID:842669
KEGG:ath:AT1G63650 GeneFarm:1894 TAIR:At1g63650 eggNOG:NOG320411
HOGENOM:HOG000237985 InParanoid:Q9CAD0 OMA:ERASANC PhylomeDB:Q9CAD0
ProtClustDB:CLSN2682588 Genevestigator:Q9CAD0 GermOnline:AT1G63650
GO:GO:0009957 Uniprot:Q9CAD0
Length = 596
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+ T +H+L+E+ RREK++ER L+ ++P K+ K +LD+ I Y+Q LQ +V+ L
Sbjct: 401 EETGNHALSEKKRREKLNERFMTLRSIIPSISKID-KVSILDDTIEYLQDLQKRVQEL 457
>TAIR|locus:2045263 [details] [associations]
symbol:AT2G31730 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0009723 "response to
ethylene stimulus" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 EMBL:CP002685 GO:GO:0003700
GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240890 OMA:SKGLCLV EMBL:AJ576041 IPI:IPI00539360
RefSeq:NP_180732.3 UniGene:At.38180 ProteinModelPortal:Q7XJU1
SMR:Q7XJU1 DNASU:817730 EnsemblPlants:AT2G31730.1 GeneID:817730
KEGG:ath:AT2G31730 TAIR:At2g31730 InParanoid:Q7XJU1
PhylomeDB:Q7XJU1 ProtClustDB:CLSN2687695 Genevestigator:Q7XJU1
Uniprot:Q7XJU1
Length = 153
Score = 102 (41.0 bits), Expect = 0.00068, P = 0.00068
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
+ +R +++D S + + R++K++ER+ LQ+LV K T A +L E + Y+QFLQ QV
Sbjct: 25 KIKRHKSSDL-SFSSKERKDKLAERISALQQLVSPYGK-TDTASVLLEGMQYIQFLQEQV 82
Query: 244 EFLSMKLASVNP 255
+ LS P
Sbjct: 83 KVLSAPYLQATP 94
>TAIR|locus:2062225 [details] [associations]
symbol:AT2G22750 "AT2G22750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC006340
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF488562 EMBL:DQ446549
EMBL:DQ653015 IPI:IPI00538506 IPI:IPI00846694 PIR:D84616
RefSeq:NP_001077944.1 RefSeq:NP_179860.2 UniGene:At.39395
ProteinModelPortal:Q1PF17 SMR:Q1PF17 EnsemblPlants:AT2G22750.2
GeneID:816805 KEGG:ath:AT2G22750 TAIR:At2g22750 eggNOG:NOG266714
HOGENOM:HOG000240300 InParanoid:Q8S3F3 OMA:FDISIIA PhylomeDB:Q1PF17
ProtClustDB:CLSN2690865 Genevestigator:Q1PF17 Uniprot:Q1PF17
Length = 305
Score = 110 (43.8 bits), Expect = 0.00098, P = 0.00098
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 210
N+ + K+E+ P+ + + + + R++ A D H LAER RREK+++R
Sbjct: 86 NLIFSPKDEEIGLPEHKKAELIIRGTKRAQSLTRSQ-SNAQD-HILAERKRREKLTQRFV 143
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
L L+PG K+ KA +L + I ++++LQ V+
Sbjct: 144 ALSALIPGLKKMD-KASVLGDAIKHIKYLQESVK 176
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 370 280 0.00082 115 3 11 23 0.40 34
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 106
No. of states in DFA: 601 (64 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.25u 0.16s 33.41t Elapsed: 00:00:02
Total cpu time: 33.26u 0.16s 33.42t Elapsed: 00:00:02
Start: Sat May 11 15:19:54 2013 End: Sat May 11 15:19:56 2013
WARNINGS ISSUED: 1