BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017497
(370 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|159505446|gb|ABW97699.1| putative bHLH transcription factor [Citrus sinensis]
Length = 370
Score = 768 bits (1982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/370 (99%), Positives = 370/370 (100%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA
Sbjct: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
Query: 61 VFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK 120
VF+TSCGDNH+HHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK
Sbjct: 61 VFKTSCGDNHNHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK 120
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDY 180
RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE+KVAKEPPKDY
Sbjct: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEKKVAKEPPKDY 180
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ
Sbjct: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLT 300
NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLT
Sbjct: 241 NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLT 300
Query: 301 AFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPS 360
AFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPS
Sbjct: 301 AFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPS 360
Query: 361 GFTSNLCSFN 370
GFTSNLCSFN
Sbjct: 361 GFTSNLCSFN 370
>gi|224122148|ref|XP_002318764.1| predicted protein [Populus trichocarpa]
gi|222859437|gb|EEE96984.1| predicted protein [Populus trichocarpa]
Length = 359
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 199/396 (50%), Positives = 242/396 (61%), Gaps = 63/396 (15%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFF----SQLYYPPKFPTHDDHQEMIVVNNNSNNLL 56
MAAFSYQ H P LDS + + +Y+ + E +N NS +
Sbjct: 1 MAAFSYQ--HPPLFLDSVILPNITTPIMNMNNSMYW--------FYDEAGGINTNSFYQV 50
Query: 57 DAAAVFETSCGD-------NHDHHSDDNCNEPSNNNSLATKNQSTAVSS------TEQQV 103
F + D +HDH S + S+N + TK QST S+ T +QV
Sbjct: 51 YPPETFHEAPLDVRFHEFSHHDHSSKVSL---SDNETSLTKKQSTGSSTVVDKLETGEQV 107
Query: 104 TQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENS 163
TQ T +D+KRK TN S NSAQSKD +EVKSK+QKK D K+EEK
Sbjct: 108 TQEV-------TPVDRKRKT-TNGS--LNSAQSKDVKEVKSKRQKKCR-GDMKQEEKR-- 154
Query: 164 PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT 223
PKA +KV +EPP Y+HVRARRGQATDSHSLAERVRREKISERMK+LQ+LVPGCDKVT
Sbjct: 155 PKA--VKKVPEEPPTGYVHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVT 212
Query: 224 GKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIA 283
GKA MLDEIINYVQ LQNQVEFLSMKLASVNPMFYDFGM+LD FMVRP+ + +
Sbjct: 213 GKALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMELD-AFMVRPE------RLSS 265
Query: 284 ASASAPQV-QCSPT------AQLTAFADTTTAFAPADHRNNYPVLD--TALLLQQGQRPN 334
S P + QCSP A T T NNYP++D T+LLL QG RP+
Sbjct: 266 MSPPLPSLQQCSPIQPTAFADAAAAATTTATPTTSFATANNYPLIDNSTSLLL-QGMRPS 324
Query: 335 ALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSFN 370
A +D+ N L+WDV++++Q+FL+PSG TSNLCSF+
Sbjct: 325 AFTTEDSCN-LMWDVDERRQKFLSPSGLTSNLCSFH 359
>gi|225456461|ref|XP_002284464.1| PREDICTED: transcription factor bHLH137 [Vitis vinifera]
gi|297734492|emb|CBI15739.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 198/388 (51%), Positives = 234/388 (60%), Gaps = 57/388 (14%)
Query: 1 MAAFSYQQHHHPFLLDS----------SEFIEEG---SFFSQLYYPPKFPTHDDHQEMIV 47
MAAFSYQ H PFLLDS S F+EEG + FSQ FP+ H+
Sbjct: 1 MAAFSYQ--HPPFLLDSVFLPSTPIKMSGFMEEGNTTTCFSQF-----FPSESLHE---- 49
Query: 48 VNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTE--QQVTQ 105
+ A A S H + NEP L+T + S+ V E +QVTQ
Sbjct: 50 --------VPADARVHESTSLQHSSKVTLSDNEPCVTQKLST-DSSSVVDRLELGEQVTQ 100
Query: 106 STVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK 165
++++RK ++ SS SAQSKD RE K KK KKG+ EE++
Sbjct: 101 KVAP-------IERERKRKSRDGSSLTSAQSKDAREGKGKKAKKGSGLVKDGEEEQLKAD 153
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
++K ++EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGK
Sbjct: 154 KKDQKKASEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGK 213
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAAS 285
A MLDEIINYVQ LQNQVEFLSMKLASVNPMFYDFGMDLD MVRP+ L S + +
Sbjct: 214 ALMLDEIINYVQSLQNQVEFLSMKLASVNPMFYDFGMDLD-ALMVRPERLSALTSPLPSL 272
Query: 286 ASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDT--ALLLQQGQRPNALIYQDNGN 343
QCSP+ TTT NNYPV+DT ++L QGQR N + QDNG
Sbjct: 273 Q-----QCSPSQPTAYADTTTT----FTATNNYPVMDTSASILFHQGQRLN-VFSQDNG- 321
Query: 344 SLLWDVEDQKQRFLNPSGFTS-NLCSFN 370
SLLWDV+DQ+Q+F+NPSG S NLCSFN
Sbjct: 322 SLLWDVDDQRQKFINPSGLISNNLCSFN 349
>gi|357520555|ref|XP_003630566.1| BHLH transcription factor [Medicago truncatula]
gi|355524588|gb|AET05042.1| BHLH transcription factor [Medicago truncatula]
Length = 327
Score = 268 bits (685), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/373 (48%), Positives = 225/373 (60%), Gaps = 49/373 (13%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
MAAFSYQ + PFL+DS+ F + PP H+ HQE+ + N
Sbjct: 1 MAAFSYQ-YQQPFLVDSTYFTNINTSL-----PPSHLFHN-HQELSLSNQ---------- 43
Query: 61 VFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK 120
ETSC D + +S N P + S+ N +QVTQ VT+ M+KK
Sbjct: 44 --ETSCVDQNSKNSISNNQSPES--SMVVDNLEKG-----EQVTQKAVTS------MEKK 88
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDY 180
R+ R S +KD + + K++K + + K E++ + ++K +E P Y
Sbjct: 89 RRIRNKTS------LTKDISKEEKSKKQKKSSGEGMKGEEKKKEEKKDQKKNVEEVPTGY 142
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAERVRREKISERMKILQ+LVPGCD+VTGKA +LDEIINYVQ LQ
Sbjct: 143 IHVRARRGQATDSHSLAERVRREKISERMKILQQLVPGCDRVTGKALVLDEIINYVQSLQ 202
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLT 300
NQVEFLSMKLASVNP+F+DF MDLD T +VRPD Q+ LNSI + S P V + T
Sbjct: 203 NQVEFLSMKLASVNPIFFDFAMDLD-TLLVRPDHQR-LNSITSPSTPIPHVSLCSSNHAT 260
Query: 301 AFADT-TTAFAPADHRNNYPVLD--TALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFL 357
FADT TT+F PA NN VLD T++ L QGQR N +G WDVEDQ+Q+ L
Sbjct: 261 PFADTITTSFHPA---NNDYVLDYPTSIFL-QGQRSNTFFEHTDGP--FWDVEDQRQKLL 314
Query: 358 NPSGFTSNLCSFN 370
NP GF +N CS N
Sbjct: 315 NPYGFGNNTCSLN 327
>gi|224136304|ref|XP_002322296.1| predicted protein [Populus trichocarpa]
gi|222869292|gb|EEF06423.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/384 (46%), Positives = 222/384 (57%), Gaps = 41/384 (10%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPK------FPTHDDHQEMIVVNNNSNN 54
MA FSYQ H P DS+ F + P K + + ++ M+ N S
Sbjct: 1 MAGFSYQ--HQPLFPDSA-------FLPSIATPTKNMNNNMYGSFEEAGNMMNTNGFSQ- 50
Query: 55 LLDAAAVFETSCGDNHDH---HSDDNCNEPS--NNNSLATKNQSTAVSSTEQQVTQSTVT 109
+ ET D H H DD+ + S +N + TK QST S+ ++ VT
Sbjct: 51 IYSPETFHETPSLDVRFHQSSHPDDHSYKVSLSDNETSLTKKQSTNSSTVVDKLESEHVT 110
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE 169
T M +KRK+ A+ NSAQSKD R+VKSK+Q N + K K E
Sbjct: 111 QEVTP--MARKRKS---ANGFLNSAQSKDARKVKSKRQ-----NKCSGDMKHEEKKPKVE 160
Query: 170 QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
+KV EPP YIHVRARRGQATDSHSLAERVRRE+ISERMKILQ LVPGCDK+TGKA ML
Sbjct: 161 KKVHGEPPAGYIHVRARRGQATDSHSLAERVRRERISERMKILQLLVPGCDKITGKALML 220
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAP 289
DEIINYVQ LQNQVEFLSMKLASVNP+ YDFGMD D FMVRP+ + + S P
Sbjct: 221 DEIINYVQSLQNQVEFLSMKLASVNPLLYDFGMDRD-AFMVRPE------RLSSMSPPLP 273
Query: 290 QVQCSPTAQ--LTAFADTTTAFAPADHRNNYPVLD-TALLLQQGQRPNALIYQDNGNSLL 346
+Q + Q A + T A NNYP++D +A L QG RP+ + L+
Sbjct: 274 SLQHNSPIQPTAFADTASATTATFATEENNYPLIDNSATLFLQGMRPSDFTTHQDSGYLM 333
Query: 347 WDVEDQKQRFLNPSGFTSNLCSFN 370
WDV++Q+Q+FLNPSG +NLCSF+
Sbjct: 334 WDVDEQRQKFLNPSGLATNLCSFH 357
>gi|255540091|ref|XP_002511110.1| DNA binding protein, putative [Ricinus communis]
gi|223550225|gb|EEF51712.1| DNA binding protein, putative [Ricinus communis]
Length = 422
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 219/376 (58%), Gaps = 66/376 (17%)
Query: 1 MAAFSYQQHHHPFLLDS------------SEFIEEGS------FFSQLYYPPKFPTHDDH 42
MAAFSYQQHH PF LDS S F+E+G+ +FSQ +YPP T D
Sbjct: 1 MAAFSYQQHH-PFHLDSVFLPSASAIKNLSGFLEKGNSIINTNYFSQ-FYPPLETTPD-- 56
Query: 43 QEMIVVNNNSNNLLDAAAVFETSCGDNHDHH----SDDNCNEPSNNNSLATKNQSTAVSS 98
LD ETS +H SD NEPS+ TK QST SS
Sbjct: 57 -------------LDVR-FHETSPPIDHSSMVAALSD---NEPSS----VTKKQSTD-SS 94
Query: 99 TEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKE 158
T +S T MDKKRK SSFNSAQSKD R+ + KKQKK N N+ K++
Sbjct: 95 TVVDKFESGEQVTQKLAPMDKKRK------SSFNSAQSKDARDGRGKKQKKCN-NEVKED 147
Query: 159 EKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
+K + K D ++ +EPP YIHVRARRGQATDSHSLAERVRREKISERMKILQ+LVPG
Sbjct: 148 KKPKAEKKDQKKVPDQEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQRLVPG 207
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNL 278
CDKVTGKA MLDEIINYVQ LQNQVEFLSMKLASVNP+FYDFGMD D MVRP+ L
Sbjct: 208 CDKVTGKALMLDEIINYVQSLQNQVEFLSMKLASVNPLFYDFGMDFD-ALMVRPE---GL 263
Query: 279 NSIIAASASAPQVQCSP----TAQLTAFADTTTAFAPADHRNNYPVLD-TALLLQQGQRP 333
NS+ AS+ QC P TT A + NNY ++D +A L GQRP
Sbjct: 264 NSL--ASSLPLMQQCPPTTAFADSTATATTTTAATSTFVTANNYSLMDASAPFLLPGQRP 321
Query: 334 NALIYQDNGNSLLWDV 349
+ I + S L +
Sbjct: 322 SDFIQMNKDKSFLIHL 337
>gi|158147058|gb|ABW22630.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147060|gb|ABW22631.1| bHLH transcription factor Upa20 [Capsicum annuum]
gi|158147061|gb|ABW22632.1| bHLH transcription factor Upa20 [Capsicum annuum]
Length = 340
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 222/390 (56%), Gaps = 77/390 (19%)
Query: 2 AAFSYQQHHHPFLLDS----------SEFIEE-------GSFFSQLYYPPKFPTHDDHQE 44
+++ QQH+ P LLDS S F EE + FSQ +Y P+FPT++
Sbjct: 5 SSYQLQQHNTPSLLDSVFLPSSPLKMSGFFEEPNNSCVVQNCFSQ-FYQPEFPTNN---- 59
Query: 45 MIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVT 104
+ VN NS L D N N + ++S + + SS+
Sbjct: 60 -VNVNENSYCL-------------------DQNTNVTNKSSSSISLDMD---SSSVTDKM 96
Query: 105 QSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSP 164
+S T+ MDKKRK+R SSS SA SK+ + + K+ K N K+EK
Sbjct: 97 ESGNNKPNVTSPMDKKRKSR-EGSSSMTSANSKNVTQGDNGKKNKSNSKLVAKDEK---- 151
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
K +E P YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTG
Sbjct: 152 ------KANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTG 205
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAA 284
KA MLDEIINYVQ LQNQVEFLSMKLAS+NPM+YDFGMDLD MVRPDD QNL+ +
Sbjct: 206 KALMLDEIINYVQSLQNQVEFLSMKLASLNPMYYDFGMDLD-ALMVRPDD-QNLSGL--- 260
Query: 285 SASAPQVQCSPTAQLTAFADTTTAFAPA---DHRNNYPVLD--TALLLQQGQRPNALIYQ 339
P +Q A TTT+ A + + YP LD +L+ QQ PN+ I+Q
Sbjct: 261 ETQLPNIQQ---------ASTTTSQAAEVIPNTNSGYPFLDNSASLMFQQAHFPNS-IHQ 310
Query: 340 DNGNSLLWDVEDQKQRFLNPSGFTSNLCSF 369
G LLW EDQ+Q+ +N SGF++N CSF
Sbjct: 311 GIG-QLLWGAEDQRQKIINQSGFSNNFCSF 339
>gi|390979910|gb|AFM30927.1| basic helix-loop-helix [Solanum lycopersicum]
Length = 330
Score = 251 bits (642), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/385 (43%), Positives = 216/385 (56%), Gaps = 72/385 (18%)
Query: 1 MAAFSYQQ--HHHPFLLDS----------SEFIEE--GSFFSQLYYPPKFPTHDDHQEMI 46
MAAFS Q H++PFLLDS S F EE S Q +Y +FP+
Sbjct: 1 MAAFSSHQLQHNNPFLLDSVFLPTSPIKMSGFFEEPNNSCIVQQFYQQEFPS-------- 52
Query: 47 VVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQS 106
NL+ H + C +P +++S++ +++V+ ++
Sbjct: 53 -------NLIS---------------HENSFCLDPKSSSSISLDMDASSVTD---KIESG 87
Query: 107 TVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKA 166
A + +DKKRK+ +SS SA SK+ ++ + K+KK N K+EK
Sbjct: 88 INNNKANVSPLDKKRKSSEGSSSM-TSAHSKNEKQGDNGKKKKINSKLVAKDEK------ 140
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
K +E P YIHVRARRGQATDSHSLAERVRREKISERMKILQ LVPGCDKVTGKA
Sbjct: 141 ----KANEEAPTGYIHVRARRGQATDSHSLAERVRREKISERMKILQSLVPGCDKVTGKA 196
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASA 286
MLDEIINYVQ LQNQVEFLSMKL S+NPM+YDFGMDLD MVRPDDQ S
Sbjct: 197 LMLDEIINYVQSLQNQVEFLSMKLTSLNPMYYDFGMDLD-ALMVRPDDQ---------SL 246
Query: 287 SAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLD--TALLLQQGQRPNALIYQDNGNS 344
S + Q + Q + + A A+ + Y LD T+L+ QQ PN+ I Q G
Sbjct: 247 SGLETQMANIQQGSTTTTSQAAEVIANTNSGYQFLDNSTSLMFQQSHFPNS-IPQGIGQ- 304
Query: 345 LLWDVEDQKQRFLNPSGFTSNLCSF 369
LLW ++Q Q+ +N SGF++N CSF
Sbjct: 305 LLWGADEQTQKIINQSGFSNNFCSF 329
>gi|356507384|ref|XP_003522447.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 334
Score = 251 bits (641), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 178/382 (46%), Positives = 220/382 (57%), Gaps = 60/382 (15%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
MAAFSYQ +HPFL+D + FF P P H Q + +S N+ +
Sbjct: 1 MAAFSYQ--YHPFLVDPA-------FFPNNLNTPSPPPHQFQQ--LPHETSSFNVTNQ-- 47
Query: 61 VFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVS---STEQQVTQSTVTTTATTTRM 117
ETSC D + + NEPS +L+ QS+ V T +QVTQ T +
Sbjct: 48 --ETSCVDQSSKITISD-NEPSVTENLSP--QSSMVVDKLETGEQVTQKV------NTPV 96
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPP 177
+KKRK R +S + S Q KGN KEE + + ++K +EPP
Sbjct: 97 EKKRKTRNGSS-------------LTSNPQSKGN--GGLKEEDKAKEEKKEQRKCPEEPP 141
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
YIHVRARRGQATDSHSLAERVRREKISERMK+LQ+LVPGCDKVTGKA MLDEIINYVQ
Sbjct: 142 TGYIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQ 201
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAAS--------ASAP 289
LQNQVEFLSMKLASVNPMFYD DLD T +VRPD Q LNS+ + S ++P
Sbjct: 202 SLQNQVEFLSMKLASVNPMFYDLATDLD-TLLVRPD--QKLNSMASPSPPLPSVSHCNSP 258
Query: 290 QVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTAL-LLQQGQRPNALIYQDNGNSLLWD 348
Q + A T T +D+ +LD ++ QGQR N +D G S WD
Sbjct: 259 NNQATTFADTTTMTPTNIFHIASDY-----LLDNSVSFFLQGQRSNVFSEEDTG-SHFWD 312
Query: 349 VEDQKQRFLNPSGFTSNLCSFN 370
EDQ+Q+FL+P GF++NLCSF+
Sbjct: 313 AEDQRQKFLHPCGFSNNLCSFH 334
>gi|449473858|ref|XP_004154003.1| PREDICTED: uncharacterized protein LOC101205943 [Cucumis sativus]
gi|449518641|ref|XP_004166345.1| PREDICTED: uncharacterized LOC101205943 [Cucumis sativus]
Length = 372
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 166/397 (41%), Positives = 220/397 (55%), Gaps = 52/397 (13%)
Query: 1 MAAFSYQQHHHPFLLDSSEF-----IEEGSFFSQLYYPPKF--PTHDDHQEMIVVNNNSN 53
MAAFSYQ + PFLLDS ++ G FF + + P + +
Sbjct: 1 MAAFSYQ--YQPFLLDSIFLHNNNPLKMGGFFDEQNFNTNCFSPFYPQDHQPQQQQQQQQ 58
Query: 54 NLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTAT 113
++ H D + +++L ++ S + +Q TVT T+
Sbjct: 59 QQQQEQPIY----------HFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSP 108
Query: 114 TTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVA 173
+ KKRK+R N+S+S ++ + + K + KG V +E KE KA S +K+
Sbjct: 109 CS---KKRKSRNNSSASSAQSKGSNDQSNGKKAKNKGEV----EEGKERDQKAKSGKKLL 161
Query: 174 KEPPKD---------YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
+E KD YIHVRARRGQATDSHSLAERVRREKISERMK LQ+LVPGCDKVTG
Sbjct: 162 EEKLKDSEDGGATTGYIHVRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTG 221
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAA 284
KA MLDEIINYVQ LQNQVEFLSMKLAS+NP+F+DF MDLD M++P+ S+ +
Sbjct: 222 KALMLDEIINYVQSLQNQVEFLSMKLASLNPIFFDFRMDLDG-LMIQPET----TSLSSI 276
Query: 285 SASAPQV-QCSPTAQLTAFADTTTAFAPA---DHRNNYPVLDTA---LLLQQGQRPN--- 334
+ + P + QCS +Q A DTT P+ NN+P++D + LLQQG P+
Sbjct: 277 TPTLPAMAQCSVVSQ-PALIDTTPPATPSPAISTGNNFPLMDPSANLFLLQQGISPSNGY 335
Query: 335 ALIYQDNGNSLLWDVEDQKQR-FLNPSGFTSNLCSFN 370
+ QDN WDVEDQK++ L SG NLC F+
Sbjct: 336 SQSSQDNVKVSSWDVEDQKRKQLLISSGIGDNLCYFH 372
>gi|356511528|ref|XP_003524477.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 324
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/267 (52%), Positives = 169/267 (63%), Gaps = 28/267 (10%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE 169
T+ TRM+KKR+ R +SSS ++S + G K +E K +E
Sbjct: 80 TSMVVTRMEKKRRARNGSSSSDPLSKSTE----------GGKKKQKKPKEVTKDKKIGAE 129
Query: 170 QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
+PP YIHVRARRGQATDSHSLAERVRREKIS+RM LQ+LVPGCDKVTGKA +L
Sbjct: 130 -----DPPTGYIHVRARRGQATDSHSLAERVRREKISKRMTTLQRLVPGCDKVTGKALVL 184
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAP 289
DEIINYVQ LQNQVEFLSMKLASVNPMF+D MDLD T MVRPD Q L++I + S
Sbjct: 185 DEIINYVQSLQNQVEFLSMKLASVNPMFFDSAMDLD-TLMVRPD--QKLSNIASPSPLPC 241
Query: 290 QVQCSPTAQLTAFADTTTAFA------PADHRNNYPVLDTALLLQQGQRPNALIYQDNGN 343
Q P Q AFADT T P + + Y + ++ L QG RPN I++DNG
Sbjct: 242 VAQFRP-HQAIAFADTITTPTTTTNSFPTANNDGYLLDYSSSLFLQGHRPN--IFEDNGG 298
Query: 344 SLLWDVEDQKQRFLNPSGFTSNLCSFN 370
WDVEDQ+Q+FL+P F +N SFN
Sbjct: 299 Q-FWDVEDQRQKFLHPYRFGNNSGSFN 324
>gi|449454949|ref|XP_004145216.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 340
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 149/319 (46%), Positives = 195/319 (61%), Gaps = 33/319 (10%)
Query: 72 HHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSF 131
+H D + +++L ++ S + +Q TVT T+ + KKRK+R N+S+S
Sbjct: 35 YHFPDLSKQSPESSTLVDRSDSAELPVGDQLKPAVTVTVTSPCS---KKRKSRNNSSASS 91
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD---------YIH 182
++ + + K + KG V +E KE KA S +K+ +E KD YIH
Sbjct: 92 AQSKGSNDQSNGKKAKNKGEV----EEGKERDQKAKSGKKLLEEKLKDSEDGGATTGYIH 147
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATDSHSLAERVRREKISERMK LQ+LVPGCDKVTGKA MLDEIINYVQ LQNQ
Sbjct: 148 VRARRGQATDSHSLAERVRREKISERMKTLQRLVPGCDKVTGKALMLDEIINYVQSLQNQ 207
Query: 243 VEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQV-QCSPTAQLTA 301
VEFLSMKLAS+NP+F+DF MDLD M++P+ S+ + + + P + QCS +Q A
Sbjct: 208 VEFLSMKLASLNPIFFDFRMDLDG-LMIQPET----TSLSSITPTLPAMAQCSVVSQ-PA 261
Query: 302 FADTTTAFAPA---DHRNNYPVLDTA---LLLQQGQRPN---ALIYQDNGNSLLWDVEDQ 352
DTT P+ NN+P++D + LLQQG P+ + QDN WDVEDQ
Sbjct: 262 LIDTTPPATPSPAISTGNNFPLMDPSANLFLLQQGISPSNGYSQSSQDNVKVSSWDVEDQ 321
Query: 353 KQR-FLNPSGFTSNLCSFN 370
K++ L SG NLC F+
Sbjct: 322 KRKQLLISSGIGDNLCYFH 340
>gi|356516503|ref|XP_003526933.1| PREDICTED: transcription factor bHLH77-like [Glycine max]
Length = 320
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 194/340 (57%), Gaps = 28/340 (8%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
MAAFSYQ +HPFL+D + F + + + + +S N+ +
Sbjct: 1 MAAFSYQ--YHPFLVDPAFFPNNLNTPNSPPP-----PLPSQFQQLPHETSSFNVTNQ-- 51
Query: 61 VFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKK 120
ETSC D + + NEPS TKN S S ++ T +DKK
Sbjct: 52 --ETSCVDQSSKITISD-NEPS-----VTKNLSPQSSMVVDKLETGEQVTQKVNIPVDKK 103
Query: 121 RKNRTNASSSFNSAQSKD-PREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
R+ R N SS ++ QSKD E K+KKQ+K N KEE + + ++K +EPP
Sbjct: 104 RRTR-NGSSFTSNPQSKDTATEGKNKKQRKNN--GGLKEEDKAKEEKKDQRKCPEEPPTG 160
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRGQATDSHSLAERVRREKISERMK+LQ+LVPGCDKVTGKA MLDEIINYVQ L
Sbjct: 161 YIHVRARRGQATDSHSLAERVRREKISERMKVLQRLVPGCDKVTGKALMLDEIINYVQSL 220
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQL 299
QNQVEFLSMKLASVNPMFYD DLD T +VRP+ LNS+ + S C+
Sbjct: 221 QNQVEFLSMKLASVNPMFYDLATDLD-TLLVRPE---KLNSMASPSPLPSMSHCNSPNNQ 276
Query: 300 TAFADTTTAFAPAD--HRNNYPVLDTAL-LLQQGQRPNAL 336
TT P + H + +LD ++ QGQRPN L
Sbjct: 277 ATTFADTTTMTPTNIFHTTSDYLLDNSVSFFLQGQRPNVL 316
>gi|357148647|ref|XP_003574844.1| PREDICTED: transcription factor bHLH137-like [Brachypodium
distachyon]
Length = 294
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/263 (44%), Positives = 158/263 (60%), Gaps = 53/263 (20%)
Query: 117 MDKKRKNRT--NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK 174
+ +KRK T ++S++ +SA SKD ++ KS++ K+ K+ ++Q+
Sbjct: 74 VGRKRKASTADDSSATLSSAHSKDCKDGKSRRGKR--------------EKSSTDQE--- 116
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +LDEIIN
Sbjct: 117 EAPKGYIHVRARRGQATDSHSLAERVRRERISERMRLLQTLVPGCDKVTGKALILDEIIN 176
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCS 294
YVQ LQNQVEFLSM++AS++P+ Y FG+D D D Q + + + + P
Sbjct: 177 YVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLL----DQTQKIGGMFQEALAVPG---- 228
Query: 295 PTAQLTAFADTTTAFAPADHRNNYP-----VLDTALLLQQGQRPNALIY---QDNGNSLL 346
AP ++ + P ++DT QGQ A+ + QDNG+ L+
Sbjct: 229 ---------------APVLNQEHSPAPSQAMMDTTSYSLQGQ--GAISFSQSQDNGSYLM 271
Query: 347 WDVEDQKQRFLNPSGFTSNLCSF 369
V +Q+Q LN F SN+CSF
Sbjct: 272 QSVGEQRQELLNQLVF-SNMCSF 293
>gi|115480081|ref|NP_001063634.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|113631867|dbj|BAF25548.1| Os09g0510500 [Oryza sativa Japonica Group]
gi|125606291|gb|EAZ45327.1| hypothetical protein OsJ_29973 [Oryza sativa Japonica Group]
gi|215694666|dbj|BAG89857.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 282
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/281 (43%), Positives = 160/281 (56%), Gaps = 36/281 (12%)
Query: 93 STAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNV 152
+T + + + T + T+ DKKRK R ++S NSA SK E K +K+G
Sbjct: 33 TTTAPAIPEDASMETSSVVLDTSPQDKKRKPREEDTASLNSAHSK---EAKENGRKRGG- 88
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
K S ++ +E P+ +IHVRARRGQATDSHSLAERVRRE+ISERM++L
Sbjct: 89 ------------KKHSRDQMEEEAPQGFIHVRARRGQATDSHSLAERVRRERISERMRML 136
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRP 272
Q LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG+D D
Sbjct: 137 QALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGIDSD----AFS 192
Query: 273 DDQQNLNSI----IAASASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQ 328
D Q + + +A AS SP AQ A DT+ N P T L +Q
Sbjct: 193 DHSQKMEGMFHEAVAIPASVLNRGSSP-AQSHAIMDTS---------NTSPTPYT-LQVQ 241
Query: 329 QGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSF 369
G N+L QDNG+ ++ V + +Q N + +CSF
Sbjct: 242 GGSNNNSL-SQDNGSYIMQTVGEPRQELFNQVVLNNYMCSF 281
>gi|223702428|gb|ACN21645.1| putative basic helix-loop-helix protein BHLH8 [Lotus japonicus]
Length = 309
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/235 (52%), Positives = 151/235 (64%), Gaps = 24/235 (10%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE 169
T+ M+KKR++R S SKDP+ K++K N KEE + +
Sbjct: 55 TSMVVASMEKKRRSRNG------SPLSKDPKGGSKKQKKG---NGGVKEEDMAKEEKKDK 105
Query: 170 QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
+K +EP YIHVRARRGQATDSHSLAERVRREKISERM +LQ+LVPGCDKVTGKA +L
Sbjct: 106 KKGPEEPSTGYIHVRARRGQATDSHSLAERVRREKISERMNMLQQLVPGCDKVTGKALVL 165
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAP 289
+EIINYVQ LQ+QVEFLSMKLASVNPM +D MDLDN +VRP +Q +NS+ + P
Sbjct: 166 EEIINYVQSLQHQVEFLSMKLASVNPMLFDMAMDLDN-LLVRP--EQKVNSLASPPLVLP 222
Query: 290 QVQ-CSPTAQLTAFADT-----TTAFAPADH--RNNYPVLDTALLLQQGQRPNAL 336
V C+P T FADT +T+F A+H +YP D LQ QRPN L
Sbjct: 223 CVPLCNPNPG-TTFADTSTLNPSTSFPTANHDYLLDYPCSD---FLQGQQRPNFL 273
>gi|242049812|ref|XP_002462650.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
gi|241926027|gb|EER99171.1| hypothetical protein SORBIDRAFT_02g029530 [Sorghum bicolor]
Length = 281
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/262 (43%), Positives = 151/262 (57%), Gaps = 30/262 (11%)
Query: 109 TTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS 168
T+ T DKK + S+SF+SA SKD +S K+K G + + KE
Sbjct: 48 TSPQGTASDDKKPRKPREDSASFSSAHSKDSNSKESTKKKGGKRDRSSKE---------- 97
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
V +E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +
Sbjct: 98 ---VDEEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALI 154
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASA 288
LDEIINYVQ LQNQVEFLSM++AS++P+ Y FGMD D D Q + ++ A
Sbjct: 155 LDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDTD----AFSDHTQKIEGMLHHEALG 210
Query: 289 PQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIY-QDNGNSLLW 347
P++ L T H + + + G ++ + QDNG+ ++
Sbjct: 211 -----MPSSVLNRPPSET-------HMDTHNSTSSPSYEVHGDGGTSISFPQDNGSYMVQ 258
Query: 348 DVEDQKQRFLNPSGFTSNLCSF 369
V + +Q N F++++CSF
Sbjct: 259 TVGEPRQELFNQVVFSNHMCSF 280
>gi|297795891|ref|XP_002865830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311665|gb|EFH42089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 190 bits (483), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 146/249 (58%), Gaps = 46/249 (18%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYI 181
K T SSS + S K + +K NV+++K E E + ++ +EPPKDYI
Sbjct: 77 KTATTRSSSCDHGSSAITTIGKKRGRKARNVSNSK-EGVEGTKSKKQKRGSKEEPPKDYI 135
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAERVRREKISERM+ LQ LVPGCDKVTGKA MLDEIINYVQ LQN
Sbjct: 136 HVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQN 195
Query: 242 QVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLTA 301
QVEFLSMKL S++P+ YDFG DLD ++ + +P+V S T
Sbjct: 196 QVEFLSMKLTSISPVVYDFGSDLDGL-------------VLRSEMGSPEVGTS----FTN 238
Query: 302 FADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSG 361
TTT+ P+ +LD A++ ++G+ +++F++ SG
Sbjct: 239 TMPTTTSIFPS-------LLDNAIVQEEGE--------------------GREKFVDRSG 271
Query: 362 F-TSNLCSF 369
F +N CSF
Sbjct: 272 FNNNNFCSF 280
>gi|125562347|gb|EAZ07795.1| hypothetical protein OsI_30053 [Oryza sativa Indica Group]
gi|125604159|gb|EAZ43484.1| hypothetical protein OsJ_28098 [Oryza sativa Japonica Group]
Length = 291
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/262 (46%), Positives = 156/262 (59%), Gaps = 46/262 (17%)
Query: 113 TTTRMDKKRKNRTNASSSFNSAQSKDP-REVKSKKQKKGNVNDAKKEEKENSPKADSEQK 171
T+ +D+KRK ++ +SA SKD ++ KS++ KK A KE +E S D
Sbjct: 70 TSPSVDRKRK------AAEDSAHSKDSCKDGKSRRGKK-----ASKEVEEKSTTED---- 114
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
EPPK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +LDE
Sbjct: 115 ---EPPKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDE 171
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQV 291
IINYVQ LQNQVEFLSM++AS++P+ Y FGMD D Q + + + + P
Sbjct: 172 IINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGLH------DQKIGGMFQEALAMPNP 225
Query: 292 ---QCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWD 348
Q SP A A DTT+ +Y + Q Q QDNG+ L+
Sbjct: 226 VLNQSSP-APSQAIMDTTST-------TSYSL--------QSQHGAISFSQDNGSYLMQA 269
Query: 349 V-EDQKQRFLNPSGFTSNLCSF 369
V E ++Q LN F +N+CSF
Sbjct: 270 VGEPRQQEMLNQLVF-NNMCSF 290
>gi|18423212|ref|NP_568745.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|30695963|ref|NP_851163.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|75305763|sp|Q93W88.1|BH137_ARATH RecName: Full=Transcription factor bHLH137; AltName: Full=Basic
helix-loop-helix protein 137; Short=AtbHLH137;
Short=bHLH 137; AltName: Full=Transcription factor EN
89; AltName: Full=bHLH transcription factor bHLH137
gi|16226850|gb|AAL16280.1|AF428350_1 unknown protein [Arabidopsis thaliana]
gi|15982883|gb|AAL09788.1| probable DNA-binding protein [Arabidopsis thaliana]
gi|21360503|gb|AAM47367.1| At5g50917/At5g50917 [Arabidopsis thaliana]
gi|21593195|gb|AAM65144.1| unknown [Arabidopsis thaliana]
gi|332008626|gb|AED96009.1| transcription factor bHLH137 [Arabidopsis thaliana]
gi|332008627|gb|AED96010.1| transcription factor bHLH137 [Arabidopsis thaliana]
Length = 286
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 182/378 (48%), Gaps = 102/378 (26%)
Query: 1 MAAFSYQQHHHPFLLDSSEF------IEEGSFFSQ--LYYPPKFPTHDDHQEMIVVNNNS 52
MA FSY Q++ LLD F I SF Q LY P T +D +
Sbjct: 1 MATFSYFQNYPHSLLDPLLFPTPHSSINLTSFIDQNHLYPLPNISTVEDISFL------- 53
Query: 53 NNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTA 112
+++ D N S + TK +T SS +Q + T
Sbjct: 54 ------------------EYNVDKTENSGSEKLANTTKTATTGSSSCDQLSHGPSAITNT 95
Query: 113 TTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKV 172
TR K R +S NS + + R KSKKQK+G+
Sbjct: 96 GKTRGRKAR-------NSNNSKEGVEGR--KSKKQKRGS--------------------- 125
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
+EPP DYIHVRARRGQATDSHSLAERVRREKISERM+ LQ LVPGCDKVTGKA MLDEI
Sbjct: 126 KEEPPTDYIHVRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEI 185
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQ 292
INYVQ LQ QVEFLSMKL S++P+ YDFG DLD I+ + +P+V
Sbjct: 186 INYVQTLQTQVEFLSMKLTSISPVVYDFGSDLDGL-------------ILQSEMGSPEVG 232
Query: 293 CSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQ 352
S T TTT P+ +LD +++ Q Q+ G ++
Sbjct: 233 TS----FTNAMPTTTPIFPS-------LLDNSVVPTHAQ------VQEEG--------EE 267
Query: 353 KQRFLNPSGF-TSNLCSF 369
++ F++ SGF +N CSF
Sbjct: 268 RENFVDRSGFNNNNFCSF 285
>gi|326519344|dbj|BAJ96671.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 279
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/270 (41%), Positives = 153/270 (56%), Gaps = 47/270 (17%)
Query: 109 TTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS 168
T T M+KKRK + + ++S NSA SK E K +K+G KK++KE + + +
Sbjct: 46 TPLVATASMEKKRKPKEDTTASLNSAHSK---ETKESTRKRG----GKKQDKETAEEEEE 98
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
PK YIHVRARRGQATDSHSL+ERVRRE+ISERM++LQ LVPGCDKVTGKA +
Sbjct: 99 --------PKGYIHVRARRGQATDSHSLSERVRRERISERMRMLQSLVPGCDKVTGKALI 150
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASA 288
LDEIINYV+ LQNQVEFLSM++AS++P+ Y FGM+ + F D + + +A+
Sbjct: 151 LDEIINYVRSLQNQVEFLSMRIASLSPVVYGFGMESEAAF---SDQSHKIEGMFHEAAAL 207
Query: 289 PQ-----VQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGN 343
P SPT T++ +P Y + T QDNG+
Sbjct: 208 PTDPPMNRSSSPTPSQAMMDTVTSSSSPP-----YSLQGT---------------QDNGS 247
Query: 344 S----LLWDVEDQKQRFLNPSGFTSNLCSF 369
S ++ V + + N F++ +CSF
Sbjct: 248 SSSSYMMQTVGEPRHELFNQVVFSNYMCSF 277
>gi|5923912|gb|AAD56411.1|AF185269_1 bHLH transcription factor GBOF-1 [Tulipa gesneriana]
Length = 321
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 158/280 (56%), Gaps = 76/280 (27%)
Query: 1 MAAFSY--QQHHHPFLLDSSEFIEEGSFFSQ----------LYYPPKFPTHDDHQEMIVV 48
MAAFSY QQH LLDS++ SF Q LYYP PT
Sbjct: 1 MAAFSYKQQQHQSNLLLDSTDH-HHLSFQFQDLMTNSTSPFLYYP--MPT---------- 47
Query: 49 NNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTV 108
+ +N+ LD+A+ + C ++S+A ST +
Sbjct: 48 -SATNSTLDSASDNQKDC-----------------SSSVAEPQSSTEI------------ 77
Query: 109 TTTATTTRMDKKRKNRTNASSSFNSAQSKD-PREVKSKK-QKKGNVNDAKKEEKENSPKA 166
+KRK++++ S S QSK RE KS+K QKK N++ E KE + +
Sbjct: 78 ----------RKRKDKSDGSC-MTSVQSKGTKRETKSRKSQKKPKANESD-EMKERTQEE 125
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
+ E P YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGKA
Sbjct: 126 E-------EAPVGYIHVRARRGQATDSHSLAERVRREKISERMKLLQALVPGCDKVTGKA 178
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
MLDEIINYVQ LQNQVEFLSMKLA+V+PM Y+FG+D++
Sbjct: 179 VMLDEIINYVQSLQNQVEFLSMKLATVSPMLYEFGLDIEG 218
>gi|226500746|ref|NP_001149110.1| LOC100282732 [Zea mays]
gi|195624818|gb|ACG34239.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 287
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 167/285 (58%), Gaps = 34/285 (11%)
Query: 92 QSTAVSSTEQQVTQSTVTTTA--TTTRMDKK--RKNRTNASSSFNSAQSKDPREVKSKKQ 147
TA + + T S V T+ T+ D K RK++ ++ +SF+SA+SKD +S K+
Sbjct: 29 HGTATADSASLETSSGVLDTSPRGTSSGDNKACRKHKEDSGASFSSARSKDSNSKESSKR 88
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
G + + K KV +E PK YIHVRARRGQATD+HSLAERVRRE+ISE
Sbjct: 89 SGGKRDRSSK-------------KVDEEEPKGYIHVRARRGQATDNHSLAERVRRERISE 135
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNT 267
RM++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FGMD +
Sbjct: 136 RMRVLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASLSPVLYGFGMDSSDA 195
Query: 268 F--MVRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADT-TTAFAPADHRNNYPVLDTA 324
F ++ + + A S+ + +P+ A DT T++ +P +Y V
Sbjct: 196 FSDLITQKIEGMAHHEAFAMPSSSVLNGTPS---EALVDTHTSSSSP-----SYEVHG-- 245
Query: 325 LLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSF 369
G + QD+G+ ++ V + +Q + F++++C F
Sbjct: 246 ----DGGTASVSFPQDSGSYMVQTVGEPRQELFSQVVFSNHMCPF 286
>gi|242079823|ref|XP_002444680.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
gi|241941030|gb|EES14175.1| hypothetical protein SORBIDRAFT_07g025920 [Sorghum bicolor]
Length = 293
Score = 185 bits (470), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 123/261 (47%), Positives = 155/261 (59%), Gaps = 43/261 (16%)
Query: 117 MDKKRKNRTNASSSFNSAQSKDPR--EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK 174
M++KRK T S++ +SAQSKD + E KSK+ K+ N KE +E S D
Sbjct: 67 MERKRKA-TEDSATLSSAQSKDCKQQESKSKRGKRPN-----KETEEKSTTED------- 113
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E K YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +LDEIIN
Sbjct: 114 EATKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGKALILDEIIN 173
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQ---V 291
YVQ LQNQVEFLSM++AS++P+ Y FG+D D D Q + + + + P
Sbjct: 174 YVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH----DHAQKMGGMFQEALAMPGPVLS 229
Query: 292 QCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWD--- 348
Q SP A A DTT+ Y + QGQ + Q+NG++ L
Sbjct: 230 QASP-APSQAIMDTTST-------TPYSL--------QGQGSISF-SQENGSTYLMQQAV 272
Query: 349 VEDQKQRFLNPSGFTSNLCSF 369
E +Q LN F +N+CSF
Sbjct: 273 GEPTRQELLNQLVF-NNMCSF 292
>gi|238009798|gb|ACR35934.1| unknown [Zea mays]
Length = 287
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 154/252 (61%), Gaps = 30/252 (11%)
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDY 180
RK++ ++ +SF+SA+SKD +S K+ G + + K KV +E PK Y
Sbjct: 62 RKHKEDSGASFSSARSKDSNSKESSKRSGGKRDRSSK-------------KVDEEEPKGY 108
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATD+HSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +LDEIINYVQ LQ
Sbjct: 109 IHVRARRGQATDNHSLAERVRRERISERMRVLQALVPGCDKVTGKALILDEIINYVQSLQ 168
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLDNTF--MVRPDDQQNLNSIIAASASAPQVQCSPTAQ 298
NQVEFLSM++AS++P+ Y FGMD + F ++ + + A S+ + +P+
Sbjct: 169 NQVEFLSMRIASLSPVLYGFGMDSSDAFSDLITQKIEGMAHHEAFAMPSSSVLNGTPS-- 226
Query: 299 LTAFADT-TTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRFL 357
A DT T++ +P +Y V G + QD+G+ ++ V + +Q
Sbjct: 227 -EALVDTHTSSSSP-----SYEVHG------DGGTASVSFPQDSGSYMVQTVGEPRQELF 274
Query: 358 NPSGFTSNLCSF 369
+ F++++C F
Sbjct: 275 SQVVFSNHMCPF 286
>gi|212721642|ref|NP_001131806.1| uncharacterized protein LOC100193179 [Zea mays]
gi|194692596|gb|ACF80382.1| unknown [Zea mays]
gi|414869722|tpg|DAA48279.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 315
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 137/212 (64%), Gaps = 21/212 (9%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKD----PREVKSKKQKKGNVNDAKKEEKENSPK 165
+ A + M++KRK + S++ +SAQSK+ +E KS++ K+ + +A EEK
Sbjct: 72 SAAAASPMERKRKPAED-SATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKS---- 126
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
E + YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGK
Sbjct: 127 -----ATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGK 181
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSII--A 283
A +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG+D D D Q + + A
Sbjct: 182 ALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH----DHAQKMGVMFQEA 237
Query: 284 ASASAPQV-QCSPTAQLTAFADTTTAFAPADH 314
+ + P + Q SP A A DTTT ++ H
Sbjct: 238 LAMAGPVLSQASPAAPSEAIMDTTTPYSLHGH 269
>gi|218195917|gb|EEC78344.1| hypothetical protein OsI_18091 [Oryza sativa Indica Group]
Length = 339
Score = 183 bits (465), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 120/202 (59%), Gaps = 24/202 (11%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEK----------ENSPKADSEQKVA 173
+ + S S Q D KS+K K+ NV EEK ++ K +++
Sbjct: 111 QGSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAG 170
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGKA MLDEII
Sbjct: 171 GEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEII 230
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQC 293
+YVQ LQNQVEFLSMKLAS+NP+ Y+FG +D + PD + L A VQC
Sbjct: 231 SYVQSLQNQVEFLSMKLASLNPLMYEFGPGID----MHPDVLRQL-----AKMPHEMVQC 281
Query: 294 -----SPTAQLTAFADTTTAFA 310
S L T FA
Sbjct: 282 MGQMGSTGISLQGLGGGPTGFA 303
>gi|414869721|tpg|DAA48278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 314
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 136/212 (64%), Gaps = 22/212 (10%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKD----PREVKSKKQKKGNVNDAKKEEKENSPK 165
+ A + M++KRK + S++ +SAQSK+ +E KS++ K+ + +A EEK
Sbjct: 72 SAAAASPMERKRKPAED-SATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKS---- 126
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
E + YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGK
Sbjct: 127 -----ATEDEATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGK 181
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSII--A 283
A +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG+D D D + + A
Sbjct: 182 ALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH-----DHAQMGVMFQEA 236
Query: 284 ASASAPQV-QCSPTAQLTAFADTTTAFAPADH 314
+ + P + Q SP A A DTTT ++ H
Sbjct: 237 LAMAGPVLSQASPAAPSEAIMDTTTPYSLHGH 268
>gi|115461581|ref|NP_001054390.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|57863903|gb|AAW56931.1| unknown protein [Oryza sativa Japonica Group]
gi|57863910|gb|AAS88824.2| unknown protein [Oryza sativa Japonica Group]
gi|113577941|dbj|BAF16304.1| Os05g0103000 [Oryza sativa Japonica Group]
gi|215686863|dbj|BAG89713.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629873|gb|EEE62005.1| hypothetical protein OsJ_16787 [Oryza sativa Japonica Group]
gi|323388921|gb|ADX60265.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 339
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 120/202 (59%), Gaps = 24/202 (11%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEK----------ENSPKADSEQKVA 173
+ + S S Q D KS+K K+ NV EEK ++ K +++
Sbjct: 111 QGSCPCSLGSTQDMDASWGKSRKHKRSNVGLKGLEEKKARRVVLHQHDDDVKKKAKEAAG 170
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPP YIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGCDKVTGKA MLDEII
Sbjct: 171 GEPPAGYIHVRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEII 230
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQC 293
+YVQ LQNQVEFLSMKLAS++P+ Y+FG +D + PD + L A VQC
Sbjct: 231 SYVQSLQNQVEFLSMKLASLSPLMYEFGPGID----MHPDVLRQL-----AKMPHEMVQC 281
Query: 294 -----SPTAQLTAFADTTTAFA 310
S L T FA
Sbjct: 282 MGQMGSTGISLQGLGGGPTGFA 303
>gi|414589941|tpg|DAA40512.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 295
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 130/223 (58%), Gaps = 12/223 (5%)
Query: 149 KGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
KG+ + + +S + D E E PK YIHVRARRGQATDSHSLAERVRRE+ISER
Sbjct: 82 KGSTKNRGGKRGRSSKEVDEE-----EEPKGYIHVRARRGQATDSHSLAERVRRERISER 136
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
M++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSMK+AS++P+ Y FGMD + F
Sbjct: 137 MRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAF 196
Query: 269 MVRPDDQQNLNSIIAASASAPQVQCSPTAQ--LTAFADTTTAFAPADHRNNYPVLDTALL 326
Q + ++ A V S ++ A AD+T A A A +Y +
Sbjct: 197 STD-HTTQKIEGMLQLHHEALAVPSSALSRPPFEAIADSTHATASASSPRSYELHGDGGG 255
Query: 327 LQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSF 369
+ QD G + V + N F++++CSF
Sbjct: 256 GGA----SISFPQDGGGYMAQTVGGPRPELFNQVVFSNHMCSF 294
>gi|212721128|ref|NP_001132785.1| uncharacterized protein LOC100194274 [Zea mays]
gi|194695392|gb|ACF81780.1| unknown [Zea mays]
gi|414589942|tpg|DAA40513.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 305
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 130/223 (58%), Gaps = 12/223 (5%)
Query: 149 KGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
KG+ + + +S + D E E PK YIHVRARRGQATDSHSLAERVRRE+ISER
Sbjct: 92 KGSTKNRGGKRGRSSKEVDEE-----EEPKGYIHVRARRGQATDSHSLAERVRRERISER 146
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
M++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSMK+AS++P+ Y FGMD + F
Sbjct: 147 MRVLQALVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAF 206
Query: 269 MVRPDDQQNLNSIIAASASAPQVQCSPTAQ--LTAFADTTTAFAPADHRNNYPVLDTALL 326
Q + ++ A V S ++ A AD+T A A A +Y +
Sbjct: 207 STD-HTTQKIEGMLQLHHEALAVPSSALSRPPFEAIADSTHATASASSPRSYELHGDGGG 265
Query: 327 LQQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSF 369
+ QD G + V + N F++++CSF
Sbjct: 266 GGA----SISFPQDGGGYMAQTVGGPRPELFNQVVFSNHMCSF 304
>gi|302763871|ref|XP_002965357.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
gi|300167590|gb|EFJ34195.1| hypothetical protein SELMODRAFT_439190 [Selaginella moellendorffii]
Length = 730
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 111/170 (65%), Gaps = 26/170 (15%)
Query: 109 TTTATTTRMDKKRKNRT-------NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE 161
T+ A+ + RK RT + SS S+ KD +VK K+Q+ N AK+E K+
Sbjct: 279 TSQASIVKESTGRKRRTLSEDKLKDGSSCVTSSGIKDGEQVKGKRQRNPN---AKEESKQ 335
Query: 162 NS----------------PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
+ PK+ E EPPKDYIHVRARRGQATDSHSLAERVRREKI
Sbjct: 336 HGNGKADRSSSDNSGSTSPKSVKENTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKI 395
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
SERMK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 396 SERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLAAVNP 445
>gi|414869720|tpg|DAA48277.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 252
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 117/161 (72%), Gaps = 14/161 (8%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKD----PREVKSKKQKKGNVNDAKKEEKENSPK 165
+ A + M++KRK + S++ +SAQSK+ +E KS++ K+ + +A EEK +
Sbjct: 72 SAAAASPMERKRKPAED-SATLSSAQSKEDCKQQQESKSRRGKRPHNKEANTEEKSATED 130
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
E + YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGK
Sbjct: 131 ---------EATRGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGCDKVTGK 181
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
A +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG+D D
Sbjct: 182 ALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDG 222
>gi|356527316|ref|XP_003532257.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 586
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 115/156 (73%), Gaps = 7/156 (4%)
Query: 109 TTTATTTRMDKKRKNRTNAS-SSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD 167
T+T+T M + + +NA S N + + +VK++++ KG N +EK+N K++
Sbjct: 316 TSTSTNPPMAAEASDDSNAKRSKPNEGEGNENGQVKAEEESKGGNNSNANDEKQN--KSN 373
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
S+ EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA
Sbjct: 374 SK---PPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKAL 430
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVN DF ++
Sbjct: 431 MLDEIINYVQSLQRQVEFLSMKLASVNTRL-DFSIE 465
>gi|308080104|ref|NP_001183737.1| uncharacterized protein LOC100502330 [Zea mays]
gi|238014262|gb|ACR38166.1| unknown [Zea mays]
gi|413921691|gb|AFW61623.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413921692|gb|AFW61624.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 319
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 115/162 (70%), Gaps = 20/162 (12%)
Query: 104 TQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPR-EVKSKKQKKGNVNDAKKEEKEN 162
T S V +A+ M++KRK S++ +S Q KD + E KS++ K+
Sbjct: 64 TSSAVVDSASP--MERKRKATAEDSAAISSPQPKDCKQESKSRRGKR------------- 108
Query: 163 SPKADSEQKVAK---EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
P+ ++E+K + E K YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGC
Sbjct: 109 -PRKETEEKSSTDEDEASKGYIHVRARRGQATDSHSLAERVRRERISERMRMLQALVPGC 167
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
DKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG
Sbjct: 168 DKVTGKAMVLDEIINYVQSLQNQVEFLSMRIASMSPVLYGFG 209
>gi|255587658|ref|XP_002534345.1| transcription factor, putative [Ricinus communis]
gi|223525454|gb|EEF28039.1| transcription factor, putative [Ricinus communis]
Length = 554
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/191 (53%), Positives = 121/191 (63%), Gaps = 13/191 (6%)
Query: 72 HHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSF 131
HH N N+S +++S +ST Q+ + + KKRK A S
Sbjct: 236 HHQKGN-----KNSSPLLQDRSELANSTSQEESSVSEQNPPNAELNSKKRKTAPKAKSKE 290
Query: 132 ----NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK----EPPKDYIHV 183
NSA+ + + + K+ KGN + K E+E+ D +Q A EPPKDYIHV
Sbjct: 291 APQPNSAKDAEVDDNSNAKRSKGNEKNDVKAEEEHKGNGDDKQNKASTKPPEPPKDYIHV 350
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QV
Sbjct: 351 RARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQV 410
Query: 244 EFLSMKLASVN 254
EFLSMKLASVN
Sbjct: 411 EFLSMKLASVN 421
>gi|226496555|ref|NP_001150926.1| bHLH transcription factor GBOF-1 [Zea mays]
gi|195642998|gb|ACG40967.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 306
Score = 171 bits (432), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 123/201 (61%), Gaps = 11/201 (5%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E PK YIHVRARRGQATDSHSLAERVRRE+ISERM++LQ LVPGCDKVTGKA +LDEII
Sbjct: 111 EEEPKGYIHVRARRGQATDSHSLAERVRRERISERMRVLQALVPGCDKVTGKALVLDEII 170
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQC 293
NYVQ LQNQVEFLSMK+AS++P+ Y FGMD + F Q + ++ A +
Sbjct: 171 NYVQSLQNQVEFLSMKIASLSPVLYGFGMDTTDAFSTDDHTTQKIEGMLQLHHEA--LAM 228
Query: 294 SPTAQLT-----AFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWD 348
P++ L+ A A++T A A + +Y L + +D G +
Sbjct: 229 PPSSALSRPPFEAVANSTHATASSP--RSYDELHGDGGGGGAG--ISFPQEDGGGYMAQT 284
Query: 349 VEDQKQRFLNPSGFTSNLCSF 369
V + N F++++CSF
Sbjct: 285 VGGPRPELFNQVVFSNHMCSF 305
>gi|20127044|gb|AAM10942.1|AF488584_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 486
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 159/291 (54%), Gaps = 48/291 (16%)
Query: 57 DAAAVFETSCGDNHDH--HSDDNCNEPSNNNSLATKNQSTAVSS--TEQQVTQSTVTTTA 112
+A +F G H ++ N EP N+ S+A K +ST SS E V S +
Sbjct: 159 EAIGLFLQGGGTMHGQCQSNELNVGEPHNDVSVAVK-ESTVRSSEQAEPNVPGSGNVSED 217
Query: 113 TTTRMDKKRKNRTNASSSF--------NSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NS 163
T + +K R +S++ NS ++ R +S+++ N ++ + +E+ NS
Sbjct: 218 TQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNS 277
Query: 164 PKADS-----EQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVP 217
P S + K + +PPKD YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVP
Sbjct: 278 PGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 337
Query: 218 GCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQN 277
GC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF N
Sbjct: 338 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DF----------------N 380
Query: 278 LNSIIAASASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQ 328
L ++A A QL A + +TT F P + +YP L + Q
Sbjct: 381 LEGLLAKDA----------LQLRAGSSSTTPF-PPNMSMSYPPLPHGFMQQ 420
>gi|255550670|ref|XP_002516384.1| transcription factor, putative [Ricinus communis]
gi|223544482|gb|EEF46001.1| transcription factor, putative [Ricinus communis]
Length = 534
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 95/129 (73%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
++S A KD K K + N +D K E+ + K + + EPPKDYIHVRAR
Sbjct: 290 SASDVKVAAEKDESTAKRSKSDEANGHDKAKAEQNGNQKQNKDNTKLPEPPKDYIHVRAR 349
Query: 187 RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
RGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFL
Sbjct: 350 RGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFL 409
Query: 247 SMKLASVNP 255
SMKLA+VNP
Sbjct: 410 SMKLATVNP 418
>gi|224069890|ref|XP_002303073.1| predicted protein [Populus trichocarpa]
gi|222844799|gb|EEE82346.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/190 (53%), Positives = 115/190 (60%), Gaps = 31/190 (16%)
Query: 97 SSTEQQVTQSTVTTTATTTRMDKKRKNRTNA----------SSSFNSAQSKDPREVKSKK 146
SS +Q+ A+ +KRK + +S+ A++ D K K
Sbjct: 256 SSVSEQIPSGEAGLKASNELNSRKRKALSKGKAKQSASNPPASATKDAETDDNSNTKRIK 315
Query: 147 QKKGNVNDAKKEEKENSP-KADSEQKVAK------------EPPKDYIHVRARRGQATDS 193
+G EE ENSP KA+ E K + EPPKDYIHVRARRGQATDS
Sbjct: 316 PNEG-------EENENSPVKAEEEPKGSGDDIQNKANSRPPEPPKDYIHVRARRGQATDS 368
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASV 253
HSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLASV
Sbjct: 369 HSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLASV 428
Query: 254 NPMFYDFGMD 263
N DF MD
Sbjct: 429 NTRL-DFNMD 437
>gi|148906813|gb|ABR16552.1| unknown [Picea sitchensis]
Length = 605
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/150 (62%), Positives = 103/150 (68%), Gaps = 14/150 (9%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNV-----NDAKKEEK--------ENSPKADSEQKVA 173
ASS +S + E +K+ K V +DAK + + E+SPK +
Sbjct: 335 ASSGGRETKSLEADESPTKRYKGAEVGSNEKDDAKSKAEQSTILSTGESSPKQTKDIVKT 394
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEII
Sbjct: 395 PEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 454
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
NYVQ LQ QVEFLSMKLA+VNP DF MD
Sbjct: 455 NYVQSLQRQVEFLSMKLATVNPRL-DFNMD 483
>gi|115479977|ref|NP_001063582.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|113631815|dbj|BAF25496.1| Os09g0501600 [Oryza sativa Japonica Group]
gi|125606227|gb|EAZ45263.1| hypothetical protein OsJ_29905 [Oryza sativa Japonica Group]
gi|215765178|dbj|BAG86875.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 121/226 (53%), Gaps = 27/226 (11%)
Query: 60 AVFETSCGD-NHDHHSDDNCNEPSNNNSL-ATKNQSTAVSSTEQQVTQSTVTTTATTTRM 117
A ET CG + C + L A N S E AT
Sbjct: 29 AFLETLCGGPGFAERAARLCGGGAGLFGLPAVGNAERGGCSREGSSVSDPAWAHATGGGG 88
Query: 118 DKKRKNRTNASSSFNSAQSKD--------PREVKS-----KKQKKGNVNDAKKEEKENSP 164
D RK + AS++ + + KD P EV K+ K VN +E +
Sbjct: 89 DNARKRKAPASAA--AGKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGS 146
Query: 165 KADSEQKVAK---------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
D QK K EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQ L
Sbjct: 147 VGDRVQKQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDL 206
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
VPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DFG
Sbjct: 207 VPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQL-DFG 251
>gi|125564259|gb|EAZ09639.1| hypothetical protein OsI_31923 [Oryza sativa Indica Group]
Length = 366
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 106/226 (46%), Positives = 121/226 (53%), Gaps = 27/226 (11%)
Query: 60 AVFETSCGD-NHDHHSDDNCNEPSNNNSL-ATKNQSTAVSSTEQQVTQSTVTTTATTTRM 117
A ET CG + C + L A N S E AT
Sbjct: 29 AFLETLCGGPGFAERAARLCGGGAGLFGLPAVGNAERGGCSREGSSVSDPAWAHATGGGG 88
Query: 118 DKKRKNRTNASSSFNSAQSKD--------PREVKS-----KKQKKGNVNDAKKEEKENSP 164
D RK + AS++ + + KD P EV K+ K VN +E +
Sbjct: 89 DNARKRKAPASAA--AGKDKDAVVGGGSSPCEVGEAKAPDSKKCKAEVNPKVEEAASDGS 146
Query: 165 KADSEQKVAK---------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
D QK K EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK+LQ L
Sbjct: 147 VGDRVQKQGKGKNSSKPAAEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKVLQDL 206
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
VPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DFG
Sbjct: 207 VPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQL-DFG 251
>gi|79320926|ref|NP_001031255.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|227204401|dbj|BAH57052.1| AT1G68920 [Arabidopsis thaliana]
gi|332196742|gb|AEE34863.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 485
Score = 167 bits (423), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 155/291 (53%), Gaps = 52/291 (17%)
Query: 55 LLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQ---QVTQSTVTTT 111
L + C N + N EP N+ S+A K + V S+EQ V S +
Sbjct: 164 FLQGGGTMQGQCQSN-----ELNVGEPHNDVSVAVK--ESTVRSSEQAKPNVPGSGNVSE 216
Query: 112 ATTTRMDKKRKNRTNASSSF-------NSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NS 163
T + +K R +S++ NS ++ R +S+++ N ++ + +E+ NS
Sbjct: 217 DTQSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNS 276
Query: 164 PKADS-----EQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVP 217
P S + K + +PPKD YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVP
Sbjct: 277 PGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVP 336
Query: 218 GCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQN 277
GC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF N
Sbjct: 337 GCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DF----------------N 379
Query: 278 LNSIIAASASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQ 328
L ++A A QL A + +TT F P + YP L + Q
Sbjct: 380 LEGLLAKDA----------LQLRAGSSSTTPF-PPNMSMAYPPLPHGFMQQ 419
>gi|356566230|ref|XP_003551337.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 585
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 101/135 (74%), Gaps = 13/135 (9%)
Query: 132 NSAQSKDPREVKSKKQKKG---NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRG 188
N+ + + +VK++++ KG N ND K+ + + P EPPKDYIHVRARRG
Sbjct: 340 NAGEGNENGQVKAEEESKGGNSNANDEKQNKSNSKPP---------EPPKDYIHVRARRG 390
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
QATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSM
Sbjct: 391 QATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSM 450
Query: 249 KLASVNPMFYDFGMD 263
KLASVN DF ++
Sbjct: 451 KLASVNTRL-DFSIE 464
>gi|15221563|ref|NP_177058.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|79590003|ref|NP_849863.2| transcription factor bHLH49 [Arabidopsis thaliana]
gi|75333634|sp|Q9CAA9.1|BH049_ARATH RecName: Full=Transcription factor bHLH49; AltName: Full=Basic
helix-loop-helix protein 49; Short=AtbHLH49; Short=bHLH
49; AltName: Full=Transcription factor EN 82; AltName:
Full=bHLH transcription factor bHLH049
gi|12323211|gb|AAG51583.1|AC011665_4 putative DNA-binding protein [Arabidopsis thaliana]
gi|22135841|gb|AAM91106.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|25090290|gb|AAN72270.1| At1g68920/T6L1_10 [Arabidopsis thaliana]
gi|332196740|gb|AEE34861.1| transcription factor bHLH49 [Arabidopsis thaliana]
gi|332196741|gb|AEE34862.1| transcription factor bHLH49 [Arabidopsis thaliana]
Length = 486
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/292 (41%), Positives = 155/292 (53%), Gaps = 53/292 (18%)
Query: 55 LLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQ---QVTQSTVTTT 111
L + C N + N EP N+ S+A K + V S+EQ V S +
Sbjct: 164 FLQGGGTMQGQCQSN-----ELNVGEPHNDVSVAVK--ESTVRSSEQAKPNVPGSGNVSE 216
Query: 112 ATTTRMDKKRKNRTNASSSF--------NSAQSKDPREVKSKKQKKGNVNDAKKEEKE-N 162
T + +K R +S++ NS ++ R +S+++ N ++ + +E+ N
Sbjct: 217 DTQSSGGNGQKGRETSSNTKKRKRNGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPN 276
Query: 163 SPKADS-----EQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLV 216
SP S + K + +PPKD YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LV
Sbjct: 277 SPGKKSNSGKQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLV 336
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQ 276
PGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 337 PGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQM-DF---------------- 379
Query: 277 NLNSIIAASASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTALLLQ 328
NL ++A A QL A + +TT F P + YP L + Q
Sbjct: 380 NLEGLLAKDA----------LQLRAGSSSTTPF-PPNMSMAYPPLPHGFMQQ 420
>gi|226498378|ref|NP_001148110.1| BHLH transcription factor [Zea mays]
gi|195615854|gb|ACG29757.1| BHLH transcription factor [Zea mays]
Length = 403
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 115/196 (58%), Gaps = 13/196 (6%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPP 177
D KR + + K P+ ++ +V D + + P + EPP
Sbjct: 131 DAKRCCKAEGGEGVEGSPVKLPKPEQAGSDS--SVEDGGGAQNQKPPPGKGKNAKPVEPP 188
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ
Sbjct: 189 RDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQ 248
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASA--PQVQCSP 295
LQ QVEFLSMKLA+VNP +DL N + Q+++ ASAS+ CSP
Sbjct: 249 SLQRQVEFLSMKLATVNP------LDLSNLPTLL---QKDMFQACGASASSVFSLESCSP 299
Query: 296 TAQLTAFADTTTAFAP 311
D +FAP
Sbjct: 300 GFPFGGQGDVFQSFAP 315
>gi|357130181|ref|XP_003566729.1| PREDICTED: uncharacterized protein LOC100831834 [Brachypodium
distachyon]
Length = 298
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/151 (57%), Positives = 105/151 (69%), Gaps = 4/151 (2%)
Query: 118 DKKRKNRT--NASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKV-AK 174
DK+R + ++S SAQ +++ +K N+ KE P+ V K
Sbjct: 89 DKRRMVSIERSGTTSLGSAQEMVGKQLHMDGSRKHQRNNNVASVKEKRPREHGGADVDVK 148
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E P YIHVRA+RGQA DSHSLAERVRREKISE+M +LQ LVPGCDKVTGKA MLDEII+
Sbjct: 149 EAPAGYIHVRAKRGQARDSHSLAERVRREKISEKMLLLQSLVPGCDKVTGKAMMLDEIIS 208
Query: 235 YVQFLQNQVEFLSMKLASVNP-MFYDFGMDL 264
YVQ LQNQVEFLSMKLAS+NP M Y+FG+D+
Sbjct: 209 YVQSLQNQVEFLSMKLASLNPMMMYEFGVDI 239
>gi|219363183|ref|NP_001136483.1| uncharacterized protein LOC100216597 [Zea mays]
gi|194695886|gb|ACF82027.1| unknown [Zea mays]
gi|413920793|gb|AFW60725.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 469
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 121/203 (59%), Gaps = 12/203 (5%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKEN---SPKA 166
+ T+++ K ++ T A +S++ E ++KK K + K E S K
Sbjct: 185 ASGTSSKQSKAKEAVTTAPP-----ESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKG 239
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC KVTGKA
Sbjct: 240 KELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKA 299
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASA 286
MLDEIINYVQ LQ QVEFLSMKL++VNP + D++F+ R DD + + +S
Sbjct: 300 VMLDEIINYVQSLQRQVEFLSMKLSTVNPRLE---LGADDSFVPR-DDANKMCAAATSSI 355
Query: 287 SAPQVQCSPTAQLTAFADTTTAF 309
S Q A A ++ AF
Sbjct: 356 SMAQQPLPLPAAYHALEGSSPAF 378
>gi|449527227|ref|XP_004170614.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 450
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 113/172 (65%), Gaps = 17/172 (9%)
Query: 102 QVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQ------KKGNVNDA 155
Q +S+++ T +KRK + A+ K+P K K + KKG +
Sbjct: 170 QEDESSLSNQDKTITNPRKRK-------AITKAKLKEPLLPKRKSEEVEDSGKKGKRENG 222
Query: 156 KKEEKENSPKADSEQKVAK----EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+ E+ + A+ +Q A E PKDYIHVRARRGQATDSHSLAERVRREKISERMK+
Sbjct: 223 RGFEENDENSAEEKQTKANSKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKL 282
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
LQ LVPGC+KVTGKA MLDEIINYVQ LQ+QVEFLSMKLASVN DF +D
Sbjct: 283 LQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKLASVNTTRVDFNVD 334
>gi|449466372|ref|XP_004150900.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 412
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/133 (63%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
Query: 135 QSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK----EPPKDYIHVRARRGQA 190
+ + P+++K+ ++K+ NV + +K + A+ Q A E PKDYIHVRARRGQA
Sbjct: 165 EKESPKKLKTVERKE-NVKTEEDLKKNDENSAEERQTKANSKPPEAPKDYIHVRARRGQA 223
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
TDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ+QVEFLSMKL
Sbjct: 224 TDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQHQVEFLSMKL 283
Query: 251 ASVNPMFYDFGMD 263
ASVN DF +D
Sbjct: 284 ASVNTTRVDFNVD 296
>gi|255537964|ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
gi|223550748|gb|EEF52234.1| DNA binding protein, putative [Ricinus communis]
Length = 408
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 169/326 (51%), Gaps = 60/326 (18%)
Query: 34 PKFPTHDDHQ--EMIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKN 91
PKFP++ EM+ +S L D + + C H + N +NN T
Sbjct: 94 PKFPSYGSGSFSEMV----SSFGLTDCGQISNSGC------HPNYTSNSAANNERTIT-- 141
Query: 92 QSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGN 151
++A+S + Q+++ V + K+RK SS F+ +K+ E+ K GN
Sbjct: 142 -NSALSQEDHQLSEEPVVGVSPD---GKRRKRLAEPSSPFDP--NKNAEEMH--KDPSGN 193
Query: 152 VNDAKKEEKENSPKADSEQ------------KVAKE-------PPKDYIHVRARRGQATD 192
+D KE+ E K+ +EQ K AKE P ++YIHVRARRGQAT+
Sbjct: 194 SSDIPKEQDEK--KSRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQATN 251
Query: 193 SHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
SHSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+
Sbjct: 252 SHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLAT 311
Query: 253 VNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQ------LTAFADTT 306
VNP +++D ++ D + A +P + P + + +T
Sbjct: 312 VNPE-----LNIDIERILSKDILHSRGGNAAIMGLSPGINAHPYSHGIFPPNIPVIPNTN 366
Query: 307 TAFAPADHRNNYPVLDTAL--LLQQG 330
F P H VL+ L L Q G
Sbjct: 367 PQFPPMPHT----VLENDLQNLFQMG 388
>gi|224128880|ref|XP_002320444.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
gi|222861217|gb|EEE98759.1| hypothetical protein POPTRDRAFT_572918 [Populus trichocarpa]
Length = 568
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 123/191 (64%), Gaps = 12/191 (6%)
Query: 68 DNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNA 127
+N D + + +E L+ K+Q+ A S + + + T +++ +A
Sbjct: 260 ENGDSREESSLSEQVPGGKLSMKSQNDANSRKRKSIPRGKAKETPSSS---------PSA 310
Query: 128 SSSFNSAQSKDPREVKSKK-QKKGNVNDAKKEEKENSPKADSEQKVAK--EPPKDYIHVR 184
S +A++ + + +SK + G+ D KE++E + + +K EPPKDYIHVR
Sbjct: 311 SDVKVAAENDESKAKRSKSDETNGSDKDTAKEKEEENGNQKQNKNNSKPPEPPKDYIHVR 370
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVE
Sbjct: 371 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 430
Query: 245 FLSMKLASVNP 255
FLSMKL+SVNP
Sbjct: 431 FLSMKLSSVNP 441
>gi|388499536|gb|AFK37834.1| unknown [Lotus japonicus]
Length = 493
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 102/153 (66%), Gaps = 17/153 (11%)
Query: 119 KKRKNRTNASSSFNSAQSK-DPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK--- 174
+K +R A + NS D + + K+G N+ + +EK S KA+ + K
Sbjct: 209 RKASSRGKAKETVNSTNPPMDAEASEDQNAKRGKPNEDEGKEKNGSVKAEEDSKAGTSSG 268
Query: 175 -------------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+K
Sbjct: 269 GDEKQNMSSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNK 328
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
VTGKA MLDEIINYV+ LQ QVEFLSMKL+SVN
Sbjct: 329 VTGKALMLDEIINYVRSLQRQVEFLSMKLSSVN 361
>gi|22331295|ref|NP_189011.2| transcription factor bHLH77 [Arabidopsis thaliana]
gi|75311240|sp|Q9LK48.1|BH077_ARATH RecName: Full=Transcription factor bHLH77; AltName: Full=Basic
helix-loop-helix protein 77; Short=AtbHLH77; Short=bHLH
77; AltName: Full=Transcription factor EN 87; AltName:
Full=bHLH transcription factor bHLH077
gi|9293943|dbj|BAB01846.1| unnamed protein product [Arabidopsis thaliana]
gi|17529310|gb|AAL38882.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|20465453|gb|AAM20186.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332643281|gb|AEE76802.1| transcription factor bHLH77 [Arabidopsis thaliana]
Length = 371
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 127/208 (61%), Gaps = 16/208 (7%)
Query: 113 TTTRMDKKRKN-------RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK 165
TT +KRK+ + ASSS ++ SK E K K + D K K
Sbjct: 109 TTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDVAGSSKNGVEK 168
Query: 166 ADSE---QKVAKEP--PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD 220
DS+ + AK P PKDYIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+
Sbjct: 169 CDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCN 228
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP-MFYDFGMDLDNTFMVRPDDQ--QN 277
++TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP M ++ L +T M++P + Q+
Sbjct: 229 RITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANASL-STEMIQPGESLTQS 287
Query: 278 LNSIIAASASAPQVQCSPTAQLTAFADT 305
L ++ + P S + F+DT
Sbjct: 288 LYAMACSEQRLPSAYYSLGKNMPRFSDT 315
>gi|20127064|gb|AAM10951.1|AF488595_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 450
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 102/132 (77%), Gaps = 9/132 (6%)
Query: 140 REVKSKKQKKGNVNDAKK-EEKENS-PK------ADSEQKVAKEPPKDYIHVRARRGQAT 191
R+ KSK+ V+ +K+ EEKE+S PK + ++ + +P KDYIHVRARRGQAT
Sbjct: 201 RKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQAT 260
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKL+
Sbjct: 261 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 320
Query: 252 SVNPMFYDFGMD 263
SVN DF MD
Sbjct: 321 SVNTRL-DFNMD 331
>gi|297833524|ref|XP_002884644.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330484|gb|EFH60903.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 456
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 102/132 (77%), Gaps = 9/132 (6%)
Query: 140 REVKSKKQKKGNVNDAKK-EEKENS-PKA------DSEQKVAKEPPKDYIHVRARRGQAT 191
R+ KSK+ V+ +K+ EEKE+S PK + ++ + +P KDYIHVRARRGQAT
Sbjct: 207 RKAKSKQNSPSTVSPSKEIEEKEDSDPKRCKKSEDNGDKTKSIDPYKDYIHVRARRGQAT 266
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKL+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 252 SVNPMFYDFGMD 263
SVN DF MD
Sbjct: 327 SVNTRL-DFNMD 337
>gi|242082133|ref|XP_002445835.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
gi|241942185|gb|EES15330.1| hypothetical protein SORBIDRAFT_07g026610 [Sorghum bicolor]
Length = 397
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 97/126 (76%), Gaps = 4/126 (3%)
Query: 133 SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK--EPPKDYIHVRARRGQA 190
+ K+ VK K ++ G+ D+ E+ + K + K AK EPPKDY+HVRARRGQA
Sbjct: 143 GGEGKEGSPVKPKPEQAGS--DSSVEDGGQTQKPPGKGKNAKLVEPPKDYVHVRARRGQA 200
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
TDSHSLAERVRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKL
Sbjct: 201 TDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKL 260
Query: 251 ASVNPM 256
A+VNP+
Sbjct: 261 ATVNPL 266
>gi|15231450|ref|NP_187390.1| transcription factor bHLH62 [Arabidopsis thaliana]
gi|75313804|sp|Q9SRT2.1|BH062_ARATH RecName: Full=Transcription factor bHLH62; AltName: Full=Basic
helix-loop-helix protein 62; Short=AtbHLH62; Short=bHLH
62; AltName: Full=Transcription factor EN 85; AltName:
Full=bHLH transcription factor bHLH062
gi|6041855|gb|AAF02164.1|AC009853_24 unknown protein [Arabidopsis thaliana]
gi|51968880|dbj|BAD43132.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51969134|dbj|BAD43259.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|111074462|gb|ABH04604.1| At3g07340 [Arabidopsis thaliana]
gi|332641009|gb|AEE74530.1| transcription factor bHLH62 [Arabidopsis thaliana]
Length = 456
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 102/132 (77%), Gaps = 9/132 (6%)
Query: 140 REVKSKKQKKGNVNDAKK-EEKENS-PK------ADSEQKVAKEPPKDYIHVRARRGQAT 191
R+ KSK+ V+ +K+ EEKE+S PK + ++ + +P KDYIHVRARRGQAT
Sbjct: 207 RKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQAT 266
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKL+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 252 SVNPMFYDFGMD 263
SVN DF MD
Sbjct: 327 SVNTRL-DFNMD 337
>gi|212721436|ref|NP_001132323.1| uncharacterized protein LOC100193765 [Zea mays]
gi|194694078|gb|ACF81123.1| unknown [Zea mays]
gi|414869584|tpg|DAA48141.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 404
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/163 (52%), Positives = 105/163 (64%), Gaps = 11/163 (6%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 210
+V D + ++ P + EPP+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK
Sbjct: 162 SVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMK 221
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMV 270
+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP +DL N +
Sbjct: 222 VLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNP------LDLSNLPTL 275
Query: 271 RPDDQQNLNSIIAASASA--PQVQCSPTAQLTAFADTTTAFAP 311
Q+++ ASAS+ CSP D +F P
Sbjct: 276 L---QKDMFQACGASASSVFSLESCSPGFPFGGQGDVFQSFVP 315
>gi|51971323|dbj|BAD44326.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
gi|51971523|dbj|BAD44426.1| putative bHLH transcription factor (bHLH062) [Arabidopsis thaliana]
Length = 456
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/132 (66%), Positives = 102/132 (77%), Gaps = 9/132 (6%)
Query: 140 REVKSKKQKKGNVNDAKK-EEKENS-PK------ADSEQKVAKEPPKDYIHVRARRGQAT 191
R+ KSK+ V+ +K+ EEKE+S PK + ++ + +P KDYIHVRARRGQAT
Sbjct: 207 RKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDPYKDYIHVRARRGQAT 266
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKL+
Sbjct: 267 DSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLS 326
Query: 252 SVNPMFYDFGMD 263
SVN DF MD
Sbjct: 327 SVNTRL-DFNMD 337
>gi|449459842|ref|XP_004147655.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
gi|449525371|ref|XP_004169691.1| PREDICTED: transcription factor bHLH78-like [Cucumis sativus]
Length = 546
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 104/163 (63%), Gaps = 17/163 (10%)
Query: 117 MDKKRKNRTNASSSFNSAQSKDPR------EVKSKKQKKGNVN----DAKKEEKENSPKA 166
+ K + T S + Q+KD + E KK K V D K + E
Sbjct: 271 LKGKAETNTRKRKSVQTGQAKDVKAAVENHEPNGKKIKPDEVTKKEIDGAKGKAEAKSSG 330
Query: 167 DSEQK------VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD 220
D+ QK EPPKDYIHVRARRGQATDSHSLAERVRREKIS+RMK LQ LVPGC+
Sbjct: 331 DANQKQNNDSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISKRMKFLQDLVPGCN 390
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF M+
Sbjct: 391 KVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DFNME 432
>gi|356503048|ref|XP_003520324.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 582
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 97/147 (65%), Gaps = 15/147 (10%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIIN
Sbjct: 364 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 423
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCS 294
YVQ LQ QVEFLSMKLASVN MDL +V D Q+ NS+
Sbjct: 424 YVQSLQRQVEFLSMKLASVNTR-----MDLSIESLVTKDVFQSNNSLAT----------H 468
Query: 295 PTAQLTAFADTTTAFAPADHRNNYPVL 321
P A + + AF + N PV
Sbjct: 469 PNAIIFPLGSSAQAFYGHQPQQNNPVF 495
>gi|253761888|ref|XP_002489318.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
gi|241946966|gb|EES20111.1| hypothetical protein SORBIDRAFT_0010s017130 [Sorghum bicolor]
Length = 324
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 116/207 (56%), Gaps = 29/207 (14%)
Query: 62 FETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKR 121
+E G H SD +C++ A+ +S A + VT A +R + R
Sbjct: 144 WEALTGAVKQHASDGSCSDGPCRKRKASGGKSKA---------KVVVTPAAPKSRAPETR 194
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYI 181
+ S+ D E K + + N KE VA EP KDYI
Sbjct: 195 AKKCKLSTDVG----HDDEEQKPAAGEAWHDNSNGKE-------------VAAEPSKDYI 237
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ LQ
Sbjct: 238 HVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQR 297
Query: 242 QVEFLSMKLASVNPMFYDFGMDLDNTF 268
QVEFLSMKL++VNP +D+D+
Sbjct: 298 QVEFLSMKLSTVNPRLK---LDVDSCI 321
>gi|224081861|ref|XP_002306505.1| predicted protein [Populus trichocarpa]
gi|222855954|gb|EEE93501.1| predicted protein [Populus trichocarpa]
Length = 407
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 133/242 (54%), Gaps = 36/242 (14%)
Query: 34 PKFPT--HDDHQEMIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLATKN 91
PKFP + EM+ S L + + C N+ N
Sbjct: 95 PKFPGFGSGNFSEMV----GSVGLTECGQIVNAGCPPNYKE----------------ANN 134
Query: 92 QSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQS------KDP------ 139
+STA + ++ Q + TT K+R+ ++S F+ ++ KDP
Sbjct: 135 ESTAHGAQREEDQQLSEETTIGALPNGKRRRLVAESNSPFDPNKNAEGEFQKDPSGESSD 194
Query: 140 --REVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
+E+ KKQK A K+ + +A + + P DYIHVRARRGQAT+SHSLA
Sbjct: 195 IAKELDEKKQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHSLA 254
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 255 ERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEL 314
Query: 258 YD 259
Y+
Sbjct: 315 YN 316
>gi|15239013|ref|NP_199667.1| transcription factor bHLH78 [Arabidopsis thaliana]
gi|75309142|sp|Q9FJL4.1|BH078_ARATH RecName: Full=Transcription factor bHLH78; AltName: Full=Basic
helix-loop-helix protein 78; Short=AtbHLH78; Short=bHLH
78; AltName: Full=Transcription factor EN 86; AltName:
Full=bHLH transcription factor bHLH078
gi|10177346|dbj|BAB10689.1| unnamed protein product [Arabidopsis thaliana]
gi|27754625|gb|AAO22758.1| unknown protein [Arabidopsis thaliana]
gi|28973465|gb|AAO64057.1| unknown protein [Arabidopsis thaliana]
gi|332008305|gb|AED95688.1| transcription factor bHLH78 [Arabidopsis thaliana]
Length = 498
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 79/89 (88%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC+KVTGKA MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
YVQ LQ QVEFLSMKL+SVN DF +D
Sbjct: 353 YVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
>gi|115441817|ref|NP_001045188.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|56784941|dbj|BAD82399.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113534719|dbj|BAF07102.1| Os01g0915600 [Oryza sativa Japonica Group]
gi|215704868|dbj|BAG94896.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189599|gb|EEC72026.1| hypothetical protein OsI_04910 [Oryza sativa Indica Group]
gi|323388943|gb|ADX60276.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 481
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/164 (54%), Positives = 108/164 (65%), Gaps = 12/164 (7%)
Query: 97 SSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAK 156
+S + + S ++T+A KR T S++ S + +S + G K
Sbjct: 202 ASGKGKGKDSPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGG----GK 257
Query: 157 KEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLV 216
K+ K++S K EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LV
Sbjct: 258 KQGKDSSSKP-------PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLV 310
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
PGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 311 PGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 353
>gi|223950211|gb|ACN29189.1| unknown [Zea mays]
gi|414869585|tpg|DAA48142.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 401
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 103/168 (61%), Gaps = 24/168 (14%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 210
+V D + ++ P + EPP+DY+HVRARRGQATDSHSLAERVRRE+IS+RMK
Sbjct: 162 SVEDGGAQNQKPPPPVKGKNAKPVEPPRDYVHVRARRGQATDSHSLAERVRRERISQRMK 221
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMV 270
+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP+
Sbjct: 222 VLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPL-------------- 267
Query: 271 RPDDQQNLNSII---AASASAPQV----QCSPTAQLTAFADTTTAFAP 311
D NL +++ A ASA V CSP D +F P
Sbjct: 268 ---DLSNLPTLLQKDACGASASSVFSLESCSPGFPFGGQGDVFQSFVP 312
>gi|297792043|ref|XP_002863906.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
gi|297309741|gb|EFH40165.1| hypothetical protein ARALYDRAFT_494918 [Arabidopsis lyrata subsp.
lyrata]
Length = 498
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 79/89 (88%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC+KVTGKA MLDEIIN
Sbjct: 291 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 350
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
YVQ LQ QVEFLSMKL+SVN DF +D
Sbjct: 351 YVQSLQRQVEFLSMKLSSVNDTRLDFNVD 379
>gi|20127085|gb|AAM10957.1|AF488610_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 498
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/89 (84%), Positives = 79/89 (88%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC+KVTGKA MLDEIIN
Sbjct: 293 EPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIIN 352
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
YVQ LQ QVEFLSMKL+SVN DF +D
Sbjct: 353 YVQSLQRQVEFLSMKLSSVNDTRLDFNVD 381
>gi|357148526|ref|XP_003574799.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 401
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 99/142 (69%), Gaps = 21/142 (14%)
Query: 133 SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD-----------SEQKVAK------- 174
S Q D +E+ +K+ + G DA+K+ PKA+ E K K
Sbjct: 125 SGQVGDQKELDAKRCRTG---DAEKKTAPVKPKAEQARSGSSVEDYGEPKKGKGKNAKPV 181
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQ LVPGC+KV GKA MLDEIIN
Sbjct: 182 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKALMLDEIIN 241
Query: 235 YVQFLQNQVEFLSMKLASVNPM 256
YVQ LQ QVEFLSMKLA+VNP+
Sbjct: 242 YVQSLQRQVEFLSMKLATVNPL 263
>gi|357513299|ref|XP_003626938.1| BHLH transcription factor [Medicago truncatula]
gi|355520960|gb|AET01414.1| BHLH transcription factor [Medicago truncatula]
Length = 498
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 136/245 (55%), Gaps = 27/245 (11%)
Query: 67 GDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRK---- 122
G +H + N + N + N +EQ + A+ +KRK
Sbjct: 158 GSQMVNHENKNSSLQQENEKMEVANSQEESKISEQNTPNGEIGVKASPDMNSRKRKASSS 217
Query: 123 -----NRTNASSSF-NSAQSKDPREVKSKKQKKG--NVNDAKKEEKENSPKADSEQK--- 171
N TN + S + + +++K+ + ++ V + ++E KE +P A E++
Sbjct: 218 KGKAPNSTNPTKGVEGSGEDFNAKKIKANEGERNENGVRNMEEEIKEGTPNAGEEKQNKS 277
Query: 172 --VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
EP KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA ML
Sbjct: 278 DSKPPEPQKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALML 337
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDD--QQN---LNSIIAA 284
DEIINYVQ LQ QVEFLSMKL+SVN MDL +V D Q N NSI
Sbjct: 338 DEIINYVQSLQRQVEFLSMKLSSVNTK-----MDLSIESLVVSKDIFQSNNSLQNSIFQL 392
Query: 285 SASAP 289
+S P
Sbjct: 393 DSSVP 397
>gi|297835410|ref|XP_002885587.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331427|gb|EFH61846.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 374
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 127/208 (61%), Gaps = 16/208 (7%)
Query: 113 TTTRMDKKRKN-------RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK 165
TT +KRK+ + ASSS ++ SK E K K + D K K
Sbjct: 112 TTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGKRSKQDEAGSSKNGVEK 171
Query: 166 ADSE---QKVAKEP--PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD 220
DS+ + AK P PKDYIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+
Sbjct: 172 CDSKGDNKDDAKPPEAPKDYIHVRARRGQATDSHSLAERARREKISERMTLLQDLVPGCN 231
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP-MFYDFGMDLDNTFMVRPDDQ--QN 277
++TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP M ++ L +T M++P + Q+
Sbjct: 232 RITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAAL-STEMIQPGESLTQS 290
Query: 278 LNSIIAASASAPQVQCSPTAQLTAFADT 305
L ++ + P S + F+DT
Sbjct: 291 LYAMACSEQRLPSAYYSLGKNMPRFSDT 318
>gi|326495502|dbj|BAJ85847.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 14/168 (8%)
Query: 95 AVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPRE--VKSKKQKKGNV 152
A ++ + ++V+TT+ + K+ +AS S +D E K K + +
Sbjct: 185 AAGGSKGKGKDASVSTTSAKDLLAKE----DSASKRCKSMSMEDGEENSGKGKAAQSSSE 240
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
N KK+ K+ + K EPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMK+L
Sbjct: 241 NGGKKQGKDGASKL-------PEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLL 293
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 294 QDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 340
>gi|326525931|dbj|BAJ93142.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 14/168 (8%)
Query: 95 AVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPRE--VKSKKQKKGNV 152
A ++ + ++V+TT+ + K+ +AS S +D E K K + +
Sbjct: 185 AAGGSKGKGKDASVSTTSAKDLLAKE----DSASKRCKSMSMEDGEENSGKGKAAQSSSE 240
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
N KK+ K+ + K EPPKD+IHVRARRG+ATDSHSLAERVRREKIS+RMK+L
Sbjct: 241 NGGKKQGKDGASKL-------PEPPKDFIHVRARRGEATDSHSLAERVRREKISQRMKLL 293
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 294 QDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 340
>gi|356527670|ref|XP_003532431.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 156
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/163 (58%), Positives = 111/163 (68%), Gaps = 8/163 (4%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK LQ+LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSMKLA VNPMFYD +DLD T
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLD-TL 59
Query: 269 MVRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADTTTAFA-PADHRNNYPVLDTALLL 327
MVRPD + N N AS S Q P Q AFADTTT + P + +Y + ++ L
Sbjct: 60 MVRPDQKLNYN---IASPSPCLAQFRPN-QAIAFADTTTTNSFPTANNGDYLLDYSSSLF 115
Query: 328 QQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSFN 370
QG R N L ++ NG WDVEDQ+Q+FL+P GF +N SFN
Sbjct: 116 LQGPRSN-LFFEYNGGQ-FWDVEDQRQKFLHPYGFGNNSGSFN 156
>gi|293333026|ref|NP_001168271.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|194707870|gb|ACF88019.1| unknown [Zea mays]
gi|223947139|gb|ACN27653.1| unknown [Zea mays]
gi|414879034|tpg|DAA56165.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414879035|tpg|DAA56166.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 460
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 136/273 (49%), Gaps = 20/273 (7%)
Query: 7 QQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAA----AVF 62
Q HH+P + +F+ + F ++ F L DA A+
Sbjct: 81 QFHHYPPMGHLDQFLADPGFAARAARLSGFDGRPGGSGYGGAVPGQFGLPDAGPIGGALR 140
Query: 63 ETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRK 122
E G+ D S + S +L + A + +T ++
Sbjct: 141 ELELGNGRDESSVSDPASASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEESSG 200
Query: 123 NRTNASSSFNSAQSKDPREVKSKKQKKGNV-NDAKKEEKENSPKADSEQKVAKEPPKDYI 181
R ++ N A+ K K + N N KK+ K+ + K EPPKDYI
Sbjct: 201 KRCKSAEESNGAEEN---SGKGKAAAQSNSDNGGKKQGKDGASKP-------PEPPKDYI 250
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ
Sbjct: 251 HVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 242 QVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDD 274
QVEFLSMKLA+VNP +D +N + P D
Sbjct: 311 QVEFLSMKLATVNPQ-----LDFNNLPNLLPKD 338
>gi|356558973|ref|XP_003547776.1| PREDICTED: transcription factor bHLH62-like [Glycine max]
Length = 548
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/107 (75%), Positives = 87/107 (81%), Gaps = 5/107 (4%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+KVTGKA MLDEIIN
Sbjct: 331 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIIN 390
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSI 281
YVQ LQ QVEFLSMKLASVN MDL ++ D Q+ NS+
Sbjct: 391 YVQSLQRQVEFLSMKLASVNTR-----MDLSIENLISKDVFQSNNSL 432
>gi|242059665|ref|XP_002458978.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
gi|241930953|gb|EES04098.1| hypothetical protein SORBIDRAFT_03g043690 [Sorghum bicolor]
Length = 484
Score = 160 bits (406), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 102/152 (67%), Gaps = 11/152 (7%)
Query: 109 TTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS 168
+T A ++ R ++ N A+ K K + + N KK+ K+++ K
Sbjct: 216 STAAKDLAKEESGGKRCKSADESNGAEDN---STKGKAAQSNSENGGKKQGKDSTSKP-- 270
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA M
Sbjct: 271 -----PEPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVM 325
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
LDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 326 LDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 356
>gi|302790872|ref|XP_002977203.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
gi|300155179|gb|EFJ21812.1| hypothetical protein SELMODRAFT_106386 [Selaginella moellendorffii]
Length = 158
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/131 (65%), Positives = 95/131 (72%), Gaps = 19/131 (14%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENS----------------PKADSEQKVAKEPPKDYIHVR 184
+VK K+Q+ N AK+E K++ PK+ E EPPKDYIHVR
Sbjct: 3 QVKGKRQRNPN---AKEESKQHGNGKADRSSSDNSGSTSPKSVKENTKPPEPPKDYIHVR 59
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVE
Sbjct: 60 ARRGQATDSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVE 119
Query: 245 FLSMKLASVNP 255
FLSMKLA+VNP
Sbjct: 120 FLSMKLAAVNP 130
>gi|46367684|emb|CAE00874.1| TA1 protein [Oryza sativa Japonica Group]
Length = 204
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 104/155 (67%), Gaps = 12/155 (7%)
Query: 106 STVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK 165
S ++T+A KR T S++ S + +S + G KK+ K++S K
Sbjct: 8 SPMSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENGG----GKKQGKDSSSK 63
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GK
Sbjct: 64 PP-------EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGK 116
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
A MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 117 AVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 150
>gi|294462520|gb|ADE76806.1| unknown [Picea sitchensis]
Length = 392
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQ--KVAK--EPPKDYIHVRARR 187
N ++SK P+ ++ K+ + +DA++ P+ + Q + AK EPPKDYIHVRARR
Sbjct: 163 NESKSKRPKSAEAMKENDDSKSDAEQRTHTGRPEVNPRQSEQSAKPPEPPKDYIHVRARR 222
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HSLAERVRREKI ERMK+LQ LVPGC+K+TGKA M+DEIINYVQ LQ QVEFLS
Sbjct: 223 GQATDRHSLAERVRREKIGERMKLLQDLVPGCNKITGKAVMVDEIINYVQSLQCQVEFLS 282
Query: 248 MKLASVNP 255
MKL +VNP
Sbjct: 283 MKLEAVNP 290
>gi|222619751|gb|EEE55883.1| hypothetical protein OsJ_04533 [Oryza sativa Japonica Group]
Length = 483
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 100/141 (70%), Gaps = 15/141 (10%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
K +NA++ NS + K +S + G KK+ K++S K EPPKD
Sbjct: 230 KSTEESNAAAEENSGKGK---AAQSNSENGG----GKKQGKDSSSKP-------PEPPKD 275
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ L
Sbjct: 276 YIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSL 335
Query: 240 QNQVEFLSMKLASVNPMFYDF 260
Q QVEFLSMKLA+VNP DF
Sbjct: 336 QRQVEFLSMKLATVNPQL-DF 355
>gi|168063707|ref|XP_001783811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664693|gb|EDQ51403.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 164
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/127 (65%), Positives = 94/127 (74%), Gaps = 9/127 (7%)
Query: 145 KKQKKGNVNDAKKEEKENSPKA-------DSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
K+Q+ G V A++ ENS + S + V P +DYIHVRARRGQATDSHSLA
Sbjct: 29 KRQRSGPVK-AERSASENSGDSVGPSSLKASSKSVQNLPKQDYIHVRARRGQATDSHSLA 87
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ Q+EFLSMKLA+VNP
Sbjct: 88 ERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRL 147
Query: 258 YDFGMDL 264
D+G D+
Sbjct: 148 -DYGFDV 153
>gi|147786897|emb|CAN73299.1| hypothetical protein VITISV_005183 [Vitis vinifera]
Length = 569
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 84/104 (80%), Gaps = 7/104 (6%)
Query: 166 ADSEQKVAK------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
D QK +K E PKDYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC
Sbjct: 349 GDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 408
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF M+
Sbjct: 409 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DFNME 451
>gi|359477937|ref|XP_002264969.2| PREDICTED: transcription factor bHLH62-like [Vitis vinifera]
Length = 569
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 84/104 (80%), Gaps = 7/104 (6%)
Query: 166 ADSEQKVAK------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
D QK +K E PKDYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC
Sbjct: 349 GDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 408
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF M+
Sbjct: 409 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DFNME 451
>gi|326501104|dbj|BAJ98783.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 384
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 101/150 (67%), Gaps = 12/150 (8%)
Query: 119 KKRKNRTNASSSFNSAQSKDP-----REVKSKKQKKGNVNDAKKEEKENSPKADSEQKVA 173
K + + S+S + K+P R ++K+ V ++ +S D EQ+
Sbjct: 109 KGKAKEPSLSTSCQVGEHKEPDAKRCRTGDAEKKAAAPVRPKAEQAGSDSSVEDGEQRKG 168
Query: 174 K-------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
K EPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK LQ LVPGC+KV GKA
Sbjct: 169 KGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKFLQDLVPGCNKVIGKA 228
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPM 256
MLDEIINYVQ LQ QVEFLSMKLA+VNP+
Sbjct: 229 LMLDEIINYVQSLQRQVEFLSMKLATVNPL 258
>gi|298205236|emb|CBI17295.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 84/104 (80%), Gaps = 7/104 (6%)
Query: 166 ADSEQKVAK------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
D QK +K E PKDYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC
Sbjct: 240 GDGNQKQSKDNPKPPEAPKDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGC 299
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF M+
Sbjct: 300 NKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRM-DFNME 342
>gi|168056080|ref|XP_001780050.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668548|gb|EDQ55153.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/133 (63%), Positives = 97/133 (72%), Gaps = 9/133 (6%)
Query: 145 KKQKKGNVNDAKKEEKENSPKADSEQ--KVAKEPPKD-----YIHVRARRGQATDSHSLA 197
K+Q+ G V A++ ENS + S + K +PP+D YIHVRARRGQATDSHSLA
Sbjct: 25 KRQRSGLVK-AERSASENSGDSASPRSLKATSKPPQDLSKQDYIHVRARRGQATDSHSLA 83
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ERVRREKISERMK LQ LVPGC K+TGKA MLDEIINYVQ LQ Q+EFLSMKLA+VNP
Sbjct: 84 ERVRREKISERMKFLQDLVPGCSKITGKAVMLDEIINYVQSLQRQIEFLSMKLAAVNPRL 143
Query: 258 YDFGMDLDNTFMV 270
D+ DL M+
Sbjct: 144 -DYSYDLLGKDML 155
>gi|290768004|gb|ADD60710.1| putative TA1 protein [Oryza brachyantha]
Length = 426
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 105/167 (62%), Gaps = 9/167 (5%)
Query: 102 QVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE 161
+ T TV T KKRK K V+ ++ + N ND K E K
Sbjct: 166 ECTGGTVHDEGTRVSCSKKRKRSGQYELLLKDHGVK---HVEGGEEPQKNENDEKDEPKR 222
Query: 162 NS-PKADSEQKVAKE----PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLV 216
+S S K AK+ P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LV
Sbjct: 223 SSVASGKSSGKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLV 282
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
PGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLASVNP DF +D
Sbjct: 283 PGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNID 328
>gi|297838663|ref|XP_002887213.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333054|gb|EFH63472.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 487
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 130/206 (63%), Gaps = 23/206 (11%)
Query: 77 NCNEPSNNNSLATKNQSTAVSSTEQ---QVTQSTVTTTATTTRMDKKRKNRTNASSS--- 130
N EP N+ S A K+ + V S EQ V S + T + RK R +S++
Sbjct: 181 NVGEPHNDVSTAVKDPT--VRSCEQAKPNVPGSGNVSEDTQSSGGNGRKGRETSSNTKKR 238
Query: 131 -----FNSAQSKDPREVKSKKQKKGNVNDAKK--EEKENSP--KADSEQKVAKEP---PK 178
NS ++ R +S+++ N D K+ E+ NSP K +S ++ K+ PK
Sbjct: 239 KRNGQVNSEAAQSHRSQQSEEEPDNN-GDKKRNSEQSPNSPGNKTNSGKRQGKQSSDLPK 297
Query: 179 D-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
D YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDEIINYVQ
Sbjct: 298 DGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQ 357
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMD 263
LQ QVEFLSMKLA+VNP DF ++
Sbjct: 358 SLQRQVEFLSMKLATVNPQM-DFNLE 382
>gi|226497606|ref|NP_001151910.1| BHLH transcription factor [Zea mays]
gi|195650891|gb|ACG44913.1| BHLH transcription factor [Zea mays]
Length = 354
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 102/164 (62%), Gaps = 21/164 (12%)
Query: 152 VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 126 ASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP--------------MF 257
LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP M+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMY 245
Query: 258 YDFGMDLDNTFMVRPD-------DQQNLNSIIAASASAPQVQCS 294
G ++ F + D DQ +L + ++A + QCS
Sbjct: 246 QPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGSAAMEDQCS 289
>gi|194692938|gb|ACF80553.1| unknown [Zea mays]
gi|414886197|tpg|DAA62211.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 353
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 102/164 (62%), Gaps = 21/164 (12%)
Query: 152 VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 126 ASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP--------------MF 257
LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP M+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMY 245
Query: 258 YDFGMDLDNTFMVRPD-------DQQNLNSIIAASASAPQVQCS 294
G ++ F + D DQ +L + ++A + QCS
Sbjct: 246 QPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGSAAMEDQCS 289
>gi|414886196|tpg|DAA62210.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 354
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 102/164 (62%), Gaps = 21/164 (12%)
Query: 152 VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 126 ASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP--------------MF 257
LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP M+
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQLDFSNLSTLLHKDMY 245
Query: 258 YDFGMDLDNTFMVRPD-------DQQNLNSIIAASASAPQVQCS 294
G ++ F + D DQ +L + ++A + QCS
Sbjct: 246 QPCGPSANSVFPLESDGAAFPFCDQADLFHSFGSGSAAMEDQCS 289
>gi|357152259|ref|XP_003576061.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 211
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 88/152 (57%), Positives = 105/152 (69%), Gaps = 15/152 (9%)
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
E++VA++P KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVP C+KVTGKA M
Sbjct: 18 EKEVAEDPHKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPSCNKVTGKAVM 77
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQN---LNSIIAAS 285
LDEIINYVQ LQ QVEFLSMKL++VNP D+DN F+ + D++ + AA
Sbjct: 78 LDEIINYVQSLQRQVEFLSMKLSTVNPQME---FDVDN-FLPKDDNEPCSLPATAYTAAE 133
Query: 286 ASAPQVQCSP--------TAQLTAFADTTTAF 309
+ P C P T Q +A A + F
Sbjct: 134 GANPAAFCYPPSPEAGKATMQQSALAICSKGF 165
>gi|226530189|ref|NP_001145523.1| uncharacterized protein LOC100278938 [Zea mays]
gi|195657423|gb|ACG48179.1| hypothetical protein [Zea mays]
Length = 460
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/273 (38%), Positives = 135/273 (49%), Gaps = 20/273 (7%)
Query: 7 QQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAA----AVF 62
Q HH+P + +F+ + F ++ F L DA A+
Sbjct: 81 QFHHYPPMGHLDQFLADPGFAARAARLSGFDGRPGGSGYGGAVPGQFGLPDAGPIGGALR 140
Query: 63 ETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRK 122
E G+ D S + S +L + A + +T ++
Sbjct: 141 ELELGNGRDESSVSDPASASAEMALKAPSDGNAKKRKASGKGKGKDGPGSTAATKEESSG 200
Query: 123 NRTNASSSFNSAQSKDPREVKSKKQKKGNV-NDAKKEEKENSPKADSEQKVAKEPPKDYI 181
R ++ N A+ K K + N N KK+ K+ + K EPPKDYI
Sbjct: 201 KRCKSAEESNGAEEN---SGKGKAAAQSNSDNGGKKQGKDGASKP-------PEPPKDYI 250
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
H RARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ
Sbjct: 251 HFRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQR 310
Query: 242 QVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDD 274
QVEFLSMKLA+VNP +D +N + P D
Sbjct: 311 QVEFLSMKLATVNPQ-----LDFNNLPNLLPKD 338
>gi|194699354|gb|ACF83761.1| unknown [Zea mays]
Length = 353
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/109 (72%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Query: 152 VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK
Sbjct: 126 ASDASVELKAQKKGKGKTAKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKF 185
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 186 LQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQL-DF 233
>gi|147802826|emb|CAN64154.1| hypothetical protein VITISV_000192 [Vitis vinifera]
Length = 270
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 117/193 (60%), Gaps = 24/193 (12%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P ++HVRARRG+ATDSHSLAER RREKISERMK+LQ LVPGCDK+ GK +LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
+ LQNQVEFL KLAS++PM +LD+ + +NL S P + +
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSNTL----QSENLCSF---GPPLPSLLACNS 214
Query: 297 AQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRF 356
QL ++A+T+ L ++ LQQ + + N +LWD++DQ+Q
Sbjct: 215 TQLNSYAETS--------------LTSSFSLQQDHLSS--VVSQNAGIILWDMDDQEQSL 258
Query: 357 LNPSGFTSNLCSF 369
L+ GF SN SF
Sbjct: 259 LDQYGF-SNRYSF 270
>gi|224065260|ref|XP_002301743.1| predicted protein [Populus trichocarpa]
gi|222843469|gb|EEE81016.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 84/105 (80%), Gaps = 10/105 (9%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 210
N N +K++ N P EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK
Sbjct: 5 NGNHKQKKDNSNPP----------EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 54
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMK+A+VNP
Sbjct: 55 FLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKMATVNP 99
>gi|390979908|gb|AFM30926.1| basic helix-loop-helix, partial [Vitis vinifera]
Length = 270
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 123/193 (63%), Gaps = 24/193 (12%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P ++HVRARRG+ATDSHSLAER RREKISERMK+LQ LVPGCDK+ GK +LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKLLQSLVPGCDKLIGKTLVLDEIINYV 161
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
+ LQNQVEFL KLAS++PM +LD++ + +NL S P + +
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTL----QSENLCSF---GPPLPSLLACNS 214
Query: 297 AQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRF 356
QL ++A+T+ L ++ LQQ ++++ Q++G +LWD++DQ+Q
Sbjct: 215 TQLNSYAETS--------------LTSSFSLQQDHL-SSVVSQNDG-IILWDMDDQEQSL 258
Query: 357 LNPSGFTSNLCSF 369
L+ GF SN SF
Sbjct: 259 LDQYGF-SNRYSF 270
>gi|225425220|ref|XP_002267465.1| PREDICTED: transcription factor bHLH76-like [Vitis vinifera]
Length = 270
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 24/193 (12%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGCDK+ GK +LDEIINYV
Sbjct: 102 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 161
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
+ LQNQVEFL KLAS++PM +LD++ + +NL S P + +
Sbjct: 162 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTL----QSENLCSF---GPPLPSLLACNS 214
Query: 297 AQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRF 356
QL ++A+T+ L ++ LQQ ++++ Q++G +LWD++DQ+Q
Sbjct: 215 TQLNSYAETS--------------LTSSFSLQQDHL-SSVVSQNDG-IILWDMDDQEQSL 258
Query: 357 LNPSGFTSNLCSF 369
L+ GF SN SF
Sbjct: 259 LDQYGF-SNRYSF 270
>gi|297602519|ref|NP_001052532.2| Os04g0350700 [Oryza sativa Japonica Group]
gi|57834129|emb|CAE05521.2| OSJNBa0038P21.14 [Oryza sativa Japonica Group]
gi|215766234|dbj|BAG98462.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675358|dbj|BAF14446.2| Os04g0350700 [Oryza sativa Japonica Group]
Length = 263
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 82/95 (86%), Gaps = 5/95 (5%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EP KDYIHVRARRGQATDSHSLAERVRRE+ISERMK+LQ LVPGC+K+TGKA MLDEIIN
Sbjct: 73 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 132
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFM 269
YVQ LQ QVEFLSMKLA++NP +D D+ +M
Sbjct: 133 YVQSLQRQVEFLSMKLATMNPQ-----LDFDSHYM 162
>gi|168059612|ref|XP_001781795.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666702|gb|EDQ53349.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 113/177 (63%), Gaps = 14/177 (7%)
Query: 91 NQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSK-KQKK 149
N S++V TEQQ + + T D R+ R ++S+ SK S+ K+ K
Sbjct: 339 NNSSSV--TEQQQASAASPARSPTGSDDSDRRKRKSSSADKLDVDSKAADVADSQPKRCK 396
Query: 150 GNVNDAKKEEKE----------NSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAE 198
G+ +D K + E SP+A E +K+ K DYIHVRARRGQATDSHSLAE
Sbjct: 397 GDNDDLVKAKAERSSSENSGDSGSPRAHKENNSSKDHAKQDYIHVRARRGQATDSHSLAE 456
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
RVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVE LSMKLASVNP
Sbjct: 457 RVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVENLSMKLASVNP 513
>gi|414589881|tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 82/103 (79%)
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK L
Sbjct: 126 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 185
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 186 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 228
>gi|219363691|ref|NP_001136513.1| uncharacterized protein LOC100216628 [Zea mays]
gi|194695994|gb|ACF82081.1| unknown [Zea mays]
Length = 314
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 82/103 (79%)
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK L
Sbjct: 128 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 187
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 188 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 230
>gi|297837577|ref|XP_002886670.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
gi|297332511|gb|EFH62929.1| hypothetical protein ARALYDRAFT_893615 [Arabidopsis lyrata subsp.
lyrata]
Length = 264
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/150 (58%), Positives = 101/150 (67%), Gaps = 3/150 (2%)
Query: 106 STVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK 165
S V + A + K R + S S E ++K+QK V D K E + S
Sbjct: 60 SHVLSQAVIEGISGAWKRREDESKSVKIVSINGASEGENKRQKIDEVCDGKAEAE--SLG 117
Query: 166 ADSEQK-VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
++EQK + EP KDYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV G
Sbjct: 118 TETEQKKLQIEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIG 177
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
KA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 178 KALVLDEIINYIQSLQRQVEFLSMKLEAVN 207
>gi|323388953|gb|ADX60281.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 405
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 77/82 (93%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 235 YVQFLQNQVEFLSMKLASVNPM 256
YVQ LQ QVEFLSMKLA+VNP+
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPL 277
>gi|255637743|gb|ACU19194.1| unknown [Glycine max]
Length = 156
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/163 (57%), Positives = 109/163 (66%), Gaps = 8/163 (4%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK LQ+LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSMKLA VNPMFYD +DLD T
Sbjct: 1 MKTLQRLVPGCDKVTGKALVLDEIINYVQSLQNQVEFLSMKLALVNPMFYDLAIDLD-TL 59
Query: 269 MVRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADTTTAFA-PADHRNNYPVLDTALLL 327
MVRPD + N N AS S Q P Q AFADTTT + P + +Y + ++ L
Sbjct: 60 MVRPDQKLNYN---IASPSPCLAQFRPN-QAIAFADTTTTNSFPTANNGDYFLDYSSSLF 115
Query: 328 QQGQRPNALIYQDNGNSLLWDVEDQKQRFLNPSGFTSNLCSFN 370
QG R N ++ NG WDVEDQ+Q+F +P GF +N SFN
Sbjct: 116 FQGPRSN-FFFEYNGGQ-FWDVEDQRQKFFHPYGFGNNSGSFN 156
>gi|115477387|ref|NP_001062289.1| Os08g0524800 [Oryza sativa Japonica Group]
gi|29647487|dbj|BAC75416.1| bHLH transcription factor(GBOF-1)-like [Oryza sativa Japonica
Group]
gi|113624258|dbj|BAF24203.1| Os08g0524800 [Oryza sativa Japonica Group]
Length = 405
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 77/82 (93%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 235 YVQFLQNQVEFLSMKLASVNPM 256
YVQ LQ QVEFLSMKLA+VNP+
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPL 277
>gi|357126478|ref|XP_003564914.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 475
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 78/86 (90%), Gaps = 1/86 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRG+ATDSHSLAERVRREKIS+RMK+LQ LVPGC+KV GKA MLDEIIN
Sbjct: 262 EPPKDYIHVRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIIN 321
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDF 260
YVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 322 YVQSLQRQVEFLSMKLATVNPQL-DF 346
>gi|218201482|gb|EEC83909.1| hypothetical protein OsI_29959 [Oryza sativa Indica Group]
Length = 405
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 70/82 (85%), Positives = 77/82 (93%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDY+HVRARRGQATDSHSLAERVRRE+IS+RMK+LQ LVPGC+KV GKA MLDEIIN
Sbjct: 196 EPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIIN 255
Query: 235 YVQFLQNQVEFLSMKLASVNPM 256
YVQ LQ QVEFLSMKLA+VNP+
Sbjct: 256 YVQSLQRQVEFLSMKLATVNPL 277
>gi|414589882|tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 329
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 82/103 (79%)
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK L
Sbjct: 126 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 185
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 186 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 228
>gi|357167346|ref|XP_003581118.1| PREDICTED: transcription factor bHLH62-like [Brachypodium
distachyon]
Length = 407
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 96/141 (68%), Gaps = 15/141 (10%)
Query: 128 SSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARR 187
+++ +A K PR + AK E +E P EP KDYIHVRARR
Sbjct: 202 ATAVTNAIPKRPRVTDGGSSDENAAVPAKVELEEEKP----------EPVKDYIHVRARR 251
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATDSHSLAERVRR++ISERMK+LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLS
Sbjct: 252 GQATDSHSLAERVRRKRISERMKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLS 311
Query: 248 MKLASVNPMFYDFGMDLDNTF 268
MKL+++NP +DLD +
Sbjct: 312 MKLSTMNPQ-----LDLDGQY 327
>gi|242032639|ref|XP_002463714.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
gi|241917568|gb|EER90712.1| hypothetical protein SORBIDRAFT_01g004710 [Sorghum bicolor]
Length = 253
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 91/122 (74%), Gaps = 5/122 (4%)
Query: 138 DPREVKSKKQKKGNVNDAKKEEKENSP----KADSEQKVAKEPPK-DYIHVRARRGQATD 192
DP +SK K N N + + E E P KA S+ A EPPK DYIHVRARRGQATD
Sbjct: 74 DPEAKRSKTNKSSNNNGSLRTEAETDPRSAGKAVSKSLPAAEPPKQDYIHVRARRGQATD 133
Query: 193 SHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
SHSLAER RREKISERMK+LQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +
Sbjct: 134 SHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQCQVEFLSMKLEA 193
Query: 253 VN 254
VN
Sbjct: 194 VN 195
>gi|293332473|ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975629|gb|ACN32002.1| unknown [Zea mays]
gi|414589883|tpg|DAA40454.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/103 (74%), Positives = 82/103 (79%)
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
+DA E K K A EPPKDY+HVRARRGQATDSHSLAERVRREKIS+RMK L
Sbjct: 126 SDALVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFL 185
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
Q LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 186 QDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 228
>gi|296088166|emb|CBI35658.3| unnamed protein product [Vitis vinifera]
Length = 204
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 122/193 (63%), Gaps = 24/193 (12%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P ++HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGCDK+ GK +LDEIINYV
Sbjct: 36 PSGFVHVRARRGEATDSHSLAERARREKISERMKFLQSLVPGCDKIIGKTLVLDEIINYV 95
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
+ LQNQVEFL KLAS++PM +LD++ + +NL S P + +
Sbjct: 96 KSLQNQVEFLVGKLASISPMLIGHEANLDSSTL----QSENLCSF---GPPLPSLLACNS 148
Query: 297 AQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRF 356
QL ++A+T+ L ++ LQQ ++++ Q++G +LWD++DQ+Q
Sbjct: 149 TQLNSYAETS--------------LTSSFSLQQDHL-SSVVSQNDG-IILWDMDDQEQSL 192
Query: 357 LNPSGFTSNLCSF 369
L+ GF SN SF
Sbjct: 193 LDQYGF-SNRYSF 204
>gi|222628662|gb|EEE60794.1| hypothetical protein OsJ_14380 [Oryza sativa Japonica Group]
Length = 293
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/95 (76%), Positives = 82/95 (86%), Gaps = 5/95 (5%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EP KDYIHVRARRGQATDSHSLAERVRRE+ISERMK+LQ LVPGC+K+TGKA MLDEIIN
Sbjct: 103 EPAKDYIHVRARRGQATDSHSLAERVRRERISERMKLLQSLVPGCNKITGKALMLDEIIN 162
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFM 269
YVQ LQ QVEFLSMKLA++NP +D D+ +M
Sbjct: 163 YVQSLQRQVEFLSMKLATMNPQ-----LDFDSHYM 192
>gi|326496517|dbj|BAJ94720.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 261
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/118 (65%), Positives = 89/118 (75%), Gaps = 14/118 (11%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
+ +KQ KG V+ +K Q A EPP+DY+HVRARRGQATDSHSLAERVRR
Sbjct: 41 RGRKQAKGKVSKSK-------------QPAADEPPRDYVHVRARRGQATDSHSLAERVRR 87
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
EKI+ +MK+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKL++VNP DF
Sbjct: 88 EKITLKMKMLQDLVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLSTVNPQL-DF 144
>gi|118486023|gb|ABK94855.1| unknown [Populus trichocarpa]
Length = 348
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 107/156 (68%), Gaps = 16/156 (10%)
Query: 111 TATTTRMDKKRKNRTNAS--SSFNSAQSKDPREVKSKKQKKGN-------VNDAKKEEKE 161
+A + +K+++N +A + + QS +P + + Q+KG+ DA K+ K+
Sbjct: 76 SAKSLGSNKRKRNGQDAELDQAKGTPQSAEPAKGSPETQQKGDQKPTSTTSKDAGKQGKQ 135
Query: 162 NSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
S +D +P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC K
Sbjct: 136 GSLGSD-------QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSK 188
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
VTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 189 VTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL 224
>gi|356502674|ref|XP_003520142.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 551
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 115/180 (63%), Gaps = 14/180 (7%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVK--SKKQKKGN---VNDAKKEEKENSPKADSEQKVA 173
+KR R + N AQ K S+ Q+KG+ ++ A K +N+ K S+ A
Sbjct: 292 RKRSGRDGDNDKANGAQELPSEGAKGNSENQQKGDQQPISTANKACGKNA-KLGSQ---A 347
Query: 174 KEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
+PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEI
Sbjct: 348 SDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 407
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDF---GMDLDNTFMVRPDDQQNLNSIIAASASAP 289
INYVQ LQ QVEFLSMKLA+VNP DF G+ + RPD L + S + P
Sbjct: 408 INYVQSLQRQVEFLSMKLATVNPRL-DFNIEGLLAKDILQQRPDPSTALGFPLDMSMAFP 466
>gi|168046350|ref|XP_001775637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673055|gb|EDQ59584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 76/89 (85%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
P +DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEIINY
Sbjct: 69 PKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINY 128
Query: 236 VQFLQNQVEFLSMKLASVNPMFYDFGMDL 264
VQ LQ Q+EFLSMKLA+VNP D DL
Sbjct: 129 VQSLQRQIEFLSMKLAAVNPPRLDHNYDL 157
>gi|18406408|ref|NP_564749.1| transcription factor BPE [Arabidopsis thaliana]
gi|28393152|gb|AAO42009.1| putative bHLH protein [Arabidopsis thaliana]
gi|28827506|gb|AAO50597.1| putative bHLH protein [Arabidopsis thaliana]
gi|113431918|emb|CAK32498.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195476|gb|AEE33597.1| transcription factor BPE [Arabidopsis thaliana]
Length = 264
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 133
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 194 RQVEFLSMKLEAVN 207
>gi|8778763|gb|AAF79771.1|AC009317_30 T30E16.21 [Arabidopsis thaliana]
Length = 348
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 70 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 127
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 128 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 187
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 188 RQVEFLSMKLEAVN 201
>gi|21592490|gb|AAM64440.1| unknown [Arabidopsis thaliana]
Length = 264
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 133
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 194 RQVEFLSMKLEAVN 207
>gi|30696324|ref|NP_849829.1| transcription factor BPE [Arabidopsis thaliana]
gi|122222656|sp|Q0JXE7.1|BPE_ARATH RecName: Full=Transcription factor BPE; AltName: Full=Basic
helix-loop-helix protein 31; Short=AtbHLH31; Short=bHLH
31; AltName: Full=Protein BIG PETAL; AltName:
Full=Transcription factor EN 88; AltName: Full=bHLH
transcription factor bHLH031
gi|113431920|emb|CAK32499.1| basic helix loop helix protein [Arabidopsis thaliana]
gi|332195477|gb|AEE33598.1| transcription factor BPE [Arabidopsis thaliana]
Length = 343
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 133
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 194 RQVEFLSMKLEAVN 207
>gi|115467562|ref|NP_001057380.1| Os06g0275600 [Oryza sativa Japonica Group]
gi|55295989|dbj|BAD68029.1| putative TA1 protein [Oryza sativa Japonica Group]
gi|113595420|dbj|BAF19294.1| Os06g0275600 [Oryza sativa Japonica Group]
Length = 437
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 103/157 (65%), Gaps = 9/157 (5%)
Query: 112 ATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD--SE 169
T KKRK R+ A+ + QK N +D K E K +S + S
Sbjct: 187 GTRVSCSKKRK-RSGQDGGVKHAEGGEQLATVGSAQK--NEDDEKGEPKRSSVASGKSSG 243
Query: 170 QKV---AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
+++ A P +DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA
Sbjct: 244 KQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKA 303
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 304 VMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNIE 339
>gi|6520231|dbj|BAA87957.1| helix-loop-helix protein homolog [Arabidopsis thaliana]
Length = 318
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 97/134 (72%), Gaps = 3/134 (2%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAK-EPPKDY 180
K R + S S + E ++K+QK V D K E + S ++EQK + EP KDY
Sbjct: 76 KRREDESKSAKIVSTIGASEGENKRQKIDEVCDGKAEAE--SLGTETEQKKQQMEPTKDY 133
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 134 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 193
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 194 RQVEFLSMKLEAVN 207
>gi|388504626|gb|AFK40379.1| unknown [Medicago truncatula]
Length = 397
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
Query: 150 GNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 209
GN N K E++ + KV+ DYIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 158 GNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERM 217
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
K LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 218 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRL-DFNID 270
>gi|357467301|ref|XP_003603935.1| Transcription factor BEE [Medicago truncatula]
gi|355492983|gb|AES74186.1| Transcription factor BEE [Medicago truncatula]
Length = 398
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
Query: 150 GNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 209
GN N K E++ + KV+ DYIHVRARRGQATDSHSLAERVRREKISERM
Sbjct: 158 GNPNTKKNCVAEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERM 217
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
K LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 218 KYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRL-DFNID 270
>gi|222635385|gb|EEE65517.1| hypothetical protein OsJ_20959 [Oryza sativa Japonica Group]
Length = 545
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 103/157 (65%), Gaps = 9/157 (5%)
Query: 112 ATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD--SE 169
T KKRK R+ A+ + QK N +D K E K +S + S
Sbjct: 295 GTRVSCSKKRK-RSGQDGGVKHAEGGEQLATVGSAQK--NEDDEKGEPKRSSVASGKSSG 351
Query: 170 QKV---AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
+++ A P +DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA
Sbjct: 352 KQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKA 411
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 412 VMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNIE 447
>gi|359473485|ref|XP_003631305.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH49-like
[Vitis vinifera]
Length = 609
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/174 (51%), Positives = 110/174 (63%), Gaps = 16/174 (9%)
Query: 100 EQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQ---------SKDPREVKSKKQKKG 150
E + + T ++ + K++ R+ + + SKD E+ Q KG
Sbjct: 319 EPSILEGTGGEPSSGKGLGSKKRKRSGQDPEIDQVKGSPQQPGEASKDNPEI----QHKG 374
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERM 209
+ N + K N+ K + A +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERM
Sbjct: 375 DQNPSSVPSK-NTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERM 433
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
K LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 434 KFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 486
>gi|225458914|ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
gi|302142156|emb|CBI19359.3| unnamed protein product [Vitis vinifera]
Length = 430
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/191 (47%), Positives = 120/191 (62%), Gaps = 17/191 (8%)
Query: 79 NEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD 138
N P N L K+ + A S Q+++ + + K+RK+ + N+++S D
Sbjct: 150 NFPPNKEGLTEKSLNGAQSQEGHQISEGDAVDASPS---GKRRKSSFDPRPPLNTSKSAD 206
Query: 139 PREVKSKKQKKGNVNDAKKEEK-----ENSPKADSEQ--KVAKE-------PPKDYIHVR 184
+ K + + ++E+K SP +Q K AK+ P ++YIHVR
Sbjct: 207 GEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVR 266
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQAT+SHSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVE
Sbjct: 267 ARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVE 326
Query: 245 FLSMKLASVNP 255
FLSMKLA+VNP
Sbjct: 327 FLSMKLATVNP 337
>gi|297843798|ref|XP_002889780.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335622|gb|EFH66039.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 140
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 97/132 (73%), Gaps = 9/132 (6%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSL 196
+DP+ + QKK + ND KE + E EP + YIH+RARRGQAT+SHSL
Sbjct: 8 EDPQSGSDQSQKK-HKNDQSKETMNKESSQNEE-----EPKEKYIHMRARRGQATNSHSL 61
Query: 197 AERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPM 256
AERVRREKISERM++LQ+LVPGC+K+TGKAFMLDEIINY+Q LQ QVEFLSMKLA+VNP
Sbjct: 62 AERVRREKISERMRLLQELVPGCNKITGKAFMLDEIINYIQSLQQQVEFLSMKLATVNP- 120
Query: 257 FYDFGMDLDNTF 268
D +D+D
Sbjct: 121 --DINIDIDRIL 130
>gi|308080388|ref|NP_001183599.1| uncharacterized protein LOC100502193 [Zea mays]
gi|238013326|gb|ACR37698.1| unknown [Zea mays]
gi|413951548|gb|AFW84197.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 480
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/118 (66%), Positives = 90/118 (76%), Gaps = 7/118 (5%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K+ + N K++ KE++ K +E PKDYIHVRARRG+ATDSHSLAERVRR
Sbjct: 246 KAAQSSSENGGGRKQQGKESATKPPAEA------PKDYIHVRARRGEATDSHSLAERVRR 299
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
EKIS+RMK+LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 300 EKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 356
>gi|449463525|ref|XP_004149484.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 108/171 (63%), Gaps = 11/171 (6%)
Query: 100 EQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-PREVKSKK------QKKGNV 152
EQ T+T +T KKRK + Q K+ P+++ Q+KG
Sbjct: 254 EQCTMGGTMTEPSTEGLCFKKRKR---GEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQ 310
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
N + K + + + + P ++YIHVRARRGQAT+SHSLAERVRREKISERM++L
Sbjct: 311 NPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLL 370
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
Q LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 371 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 420
>gi|449440736|ref|XP_004138140.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
gi|449477343|ref|XP_004154996.1| PREDICTED: transcription factor bHLH79-like [Cucumis sativus]
Length = 276
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/159 (53%), Positives = 107/159 (67%), Gaps = 12/159 (7%)
Query: 105 QSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKE----EK 160
+STVT + R KRK+ ++ S + ++ + K+ V +++ E +
Sbjct: 63 ESTVTEQSGGGR---KRKDVSSEDESSRMVSTSSANQLSNSNDKRMKVVESRDENGGIKA 119
Query: 161 ENSPKADSEQKVAK-----EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E P + +K+A+ EPPKDYIHVRARRGQATDSHSLAER RREKISERMKILQ L
Sbjct: 120 EVDPNSSDGKKLAEQSPKPEPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDL 179
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
VPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 180 VPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 218
>gi|449518045|ref|XP_004166054.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 533
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 108/171 (63%), Gaps = 11/171 (6%)
Query: 100 EQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-PREVKSKK------QKKGNV 152
EQ T+T +T KKRK + Q K+ P+++ Q+KG
Sbjct: 254 EQCTMGGTMTEPSTEGLCFKKRKR---GEQNVGLGQVKEAPQQINETAKNGAFNQQKGGQ 310
Query: 153 NDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
N + K + + + + P ++YIHVRARRGQAT+SHSLAERVRREKISERM++L
Sbjct: 311 NPSSTTSKPAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLL 370
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
Q LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 371 QDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 420
>gi|224108619|ref|XP_002314910.1| predicted protein [Populus trichocarpa]
gi|222863950|gb|EEF01081.1| predicted protein [Populus trichocarpa]
Length = 562
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 102/149 (68%), Gaps = 4/149 (2%)
Query: 117 MDKKRKNRTNASSSFNSAQSKDPREVKS--KKQKKGNVNDAKKEEKENSPKADSEQKVAK 174
+ K++ R+ + + A+ P+ K + Q+KG+ K + + + +
Sbjct: 302 LGSKKRKRSGEDAELDQAKGT-PQSAKGSPETQQKGDQKPTSTTSKASGKQGKQGSQGSD 360
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEIIN
Sbjct: 361 QPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIIN 420
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
YVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 421 YVQSLQRQVEFLSMKLATVNPRL-DFNIE 448
>gi|218197962|gb|EEC80389.1| hypothetical protein OsI_22515 [Oryza sativa Indica Group]
Length = 494
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 103/157 (65%), Gaps = 9/157 (5%)
Query: 112 ATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD--SE 169
T KKRK R+ A+ + QK N +D K E K +S + S
Sbjct: 244 GTRVSCSKKRK-RSGQDGGVKHAEGGEQLATVGSAQK--NEDDEKGEPKRSSVASGKSSG 300
Query: 170 QKV---AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
+++ A P +DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA
Sbjct: 301 KQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKA 360
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 361 VMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNIE 396
>gi|290767992|gb|ADD60699.1| putative TA1 protein [Oryza officinalis]
Length = 435
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/147 (58%), Positives = 98/147 (66%), Gaps = 3/147 (2%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKEP 176
KKRK ++ + V S K+ + + N K S K+ +Q A P
Sbjct: 192 KKRKRSGQDGGVKHAEGGEQLATVGSAKKNENDDNGEPKRSSVASRKSSGKQTKDNAGSP 251
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
+DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYV
Sbjct: 252 KEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYV 311
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMD 263
Q LQ QVEFLSMKLASVNP DF ++
Sbjct: 312 QSLQRQVEFLSMKLASVNPTL-DFNIE 337
>gi|323388959|gb|ADX60284.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 437
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 101/157 (64%), Gaps = 9/157 (5%)
Query: 112 ATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKE-EKENSPKADSEQ 170
T KKRK R+ A+ + QK N +D K E E+ + S
Sbjct: 187 GTRVSCSKKRK-RSGQDGGVKHAEGGEQLATVGSAQK--NEDDEKGEPERSSVASGKSSG 243
Query: 171 KVAKE----PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
K K+ P +DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA
Sbjct: 244 KQIKDNAGSPKEDYIHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKA 303
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 304 VMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNIE 339
>gi|290767965|gb|ADD60674.1| putative TA1 protein [Oryza granulata]
Length = 430
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 108/173 (62%), Gaps = 13/173 (7%)
Query: 95 AVSSTEQQVTQSTVTTTA-----TTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKK 149
AV S+ +++++ A T KKRK R+ + + + QK
Sbjct: 158 AVDSSSKELSKPECVGGAGRDEGTRVSCSKKRK-RSIQHGGVKHVEGGEQLATMAAAQK- 215
Query: 150 GNVNDAKKEEKENS--PKADSEQKV---AKEPPKDYIHVRARRGQATDSHSLAERVRREK 204
N ND K E K +S P S ++ A P ++YIHVRARRGQAT+SHSLAERVRREK
Sbjct: 216 -NENDEKYEPKRSSVAPGKSSRKQAKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREK 274
Query: 205 ISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLASVNP
Sbjct: 275 ISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPTL 327
>gi|297738215|emb|CBI27416.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 111/188 (59%), Gaps = 28/188 (14%)
Query: 77 NCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQS 136
C EPS+ L +K + S + ++ Q S S
Sbjct: 221 GCGEPSSGKGLGSKKRKR--SGQDPEIDQ-------------------VKGSPQQPGEAS 259
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
KD E+ Q KG+ N + K N+ K + A +PPK+ YIHVRARRGQAT+SHS
Sbjct: 260 KDNPEI----QHKGDQNPSSVPSK-NTGKHGKQGAQASDPPKEEYIHVRARRGQATNSHS 314
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 315 LAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 374
Query: 256 MFYDFGMD 263
DF ++
Sbjct: 375 RL-DFNIE 381
>gi|356538777|ref|XP_003537877.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 420
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/193 (48%), Positives = 122/193 (63%), Gaps = 8/193 (4%)
Query: 90 KNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKK 149
+N ++A +T+++ Q++ A+ + DK+ K +S +SK + +K K
Sbjct: 123 ENMASAKENTKKRKPQNSKVVAASDNKQDKRVK------ASGEEGESKVTEQTSNKNGKS 176
Query: 150 -GNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
N N+ ++ + K +S+ + +YIHVRARRGQATDSHSLAERVRREKISER
Sbjct: 177 NANKNNNRETTSAETSKDNSKGSEVQNQKPEYIHVRARRGQATDSHSLAERVRREKISER 236
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D T
Sbjct: 237 MKYLQDLVPGCNKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNLDELFTK 295
Query: 269 MVRPDDQQNLNSI 281
V P Q+ +I
Sbjct: 296 EVFPSCAQSFPNI 308
>gi|357159196|ref|XP_003578371.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 372
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Query: 155 AKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQK 214
++ K+ K+ ++ EPP+DY+HVRARRGQATDSHSLAERVRREKI+ +MK+LQ
Sbjct: 149 GERGRKQAKGKSSKSKQADDEPPRDYVHVRARRGQATDSHSLAERVRREKITIKMKMLQD 208
Query: 215 LVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 209 LVPGCNKVIGKALMLDEIINYVQSLQQQVEFLSMKLATVNPQL-DF 253
>gi|295913599|gb|ADG58045.1| transcription factor [Lycoris longituba]
Length = 229
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/151 (56%), Positives = 97/151 (64%), Gaps = 11/151 (7%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSK-------KQKKGNVNDAKKEEKENSPKADSEQKV 172
K++ R N Q P +++ KQK G + K + A +
Sbjct: 9 KKRKRINQDMELGQIQGASPMSIETTNENVLDTKQKGGQDSSTMANAKPSGTNAKNSTDG 68
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
AKE DYIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEI
Sbjct: 69 AKE---DYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEI 125
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
INYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 126 INYVQSLQRQVEFLSMKLAAVNPTL-DFNIE 155
>gi|55419646|gb|AAV51936.1| bHLH transcription factor [Gossypium hirsutum]
Length = 222
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 108/174 (62%), Gaps = 18/174 (10%)
Query: 105 QSTVTTTATTTRMDKKRKNRTN---------ASSSFNSAQSKDPREVKSKKQKKGNVNDA 155
+STVT + +KRK ++ ++S N + + +K+ K GN
Sbjct: 3 ESTVTEQSVGCGGGRKRKELSSEDESSKIVSTTTSANELNDSNGKRMKTPVSKNGNTGSK 62
Query: 156 KKEEKENSP---KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKIL 212
+ E + +S K D K A+ P +DYIHVRARRGQATDSHSLAER RRE+ISERMKIL
Sbjct: 63 EAEVEASSADGSKPDKNSKPAEPPKQDYIHVRARRGQATDSHSLAERARRERISERMKIL 122
Query: 213 QKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS------VNPMFYDF 260
Q LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL + VNP F F
Sbjct: 123 QDLVPGCNKVIGKALVLDEIINYIQSLQQQVEFLSMKLEAVNSRINVNPSFEGF 176
>gi|357516845|ref|XP_003628711.1| BHLH transcription factor [Medicago truncatula]
gi|355522733|gb|AET03187.1| BHLH transcription factor [Medicago truncatula]
Length = 467
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 119/203 (58%), Gaps = 31/203 (15%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE--- 175
K+++N + S + + P E K N KK +++ S A + K AK+
Sbjct: 239 KRKRNGQDGDSDKATGTLELPSETA-----KDNCESRKKGKQQTSSTAKASGKNAKQGSQ 293
Query: 176 ---PPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
PP + Y+HVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC+KVTGKA MLDE
Sbjct: 294 ASDPPNEGYVHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDE 353
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQV 291
IINYVQ LQ QVEFLSMKLA+VNP DF M+ + P D I+ Q
Sbjct: 354 IINYVQSLQQQVEFLSMKLATVNP-HVDFNME-----RLLPKD------IL-------QH 394
Query: 292 QCSPTAQLTAFADTTTAFAPADH 314
Q P++ L + AF P H
Sbjct: 395 QPGPSSALGFLREMPMAFPPLSH 417
>gi|326523695|dbj|BAJ93018.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 87/116 (75%), Gaps = 5/116 (4%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
+ + K+ V+D +E A E+K EP KDYIHVRARRGQATDSHSLAERVR
Sbjct: 222 INTSPPKRPRVSDGGNDENAG---AVEEEK--SEPVKDYIHVRARRGQATDSHSLAERVR 276
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
REKI ERMK+LQ LVP C+K+TGKA MLDEIINYVQ LQ QVEFLSMKL+++NP
Sbjct: 277 REKIGERMKLLQSLVPSCNKITGKALMLDEIINYVQSLQRQVEFLSMKLSTMNPQL 332
>gi|168056950|ref|XP_001780480.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668066|gb|EDQ54681.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 221
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 92/128 (71%), Gaps = 1/128 (0%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSL 196
+D R VK++ Q + N ++ K + ++ P +DYIHVRARRGQATDSHSL
Sbjct: 19 EDVRAVKAE-QASASENSGDSISPRSTLKGATSKRPQDFPKQDYIHVRARRGQATDSHSL 77
Query: 197 AERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPM 256
AERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VN
Sbjct: 78 AERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNVP 137
Query: 257 FYDFGMDL 264
D+ DL
Sbjct: 138 RLDYSYDL 145
>gi|290767978|gb|ADD60686.1| putative TA1 protein [Oryza australiensis]
Length = 436
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 102/157 (64%), Gaps = 9/157 (5%)
Query: 112 ATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENS---PKADS 168
T KKRK R+ A+ + QK N ND K + K +S K+
Sbjct: 186 GTRVSCSKKRK-RSGQDDGVKHAEGDEQLATVGSAQK--NENDEKGKPKRSSVASGKSSG 242
Query: 169 EQKV--AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
+Q A P ++YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA
Sbjct: 243 KQTKDNAGSPKEEYIHVRARRGQATNSHSLAERVRREKISERMKYLQNLVPGCTKVTGKA 302
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MLDEIINYVQ LQ QVEFLSMKLASVNP DF ++
Sbjct: 303 VMLDEIINYVQSLQRQVEFLSMKLASVNPTL-DFNIE 338
>gi|295913657|gb|ADG58071.1| transcription factor [Lycoris longituba]
Length = 258
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPK-----ADSEQKVAKEPPKDYI 181
++SS N A + + +K K GN N K E E S AD + ++ P +DYI
Sbjct: 70 STSSGNDATDSEAKRLKGMKSGDGNENSNSKTEAEASSGLCNKLADQSNQPSEAPKQDYI 129
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAER RREKISERM ILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 130 HVRARRGQATDSHSLAERARREKISERMNILQDLVPGCNKVIGKASVLDEIINYIQALQR 189
Query: 242 QVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 190 QVEFLSMKLEAVN 202
>gi|357137204|ref|XP_003570191.1| PREDICTED: uncharacterized protein LOC100822236 [Brachypodium
distachyon]
Length = 361
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 97/134 (72%), Gaps = 12/134 (8%)
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQAT 191
+S + K + + +KKG+V K++ P+A QK DYIHVRARRGQAT
Sbjct: 121 SSGRGKPEKAKPAGTRKKGDVAAQKQD-----PRAAGGQKT------DYIHVRARRGQAT 169
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAERVRRE+ISERM+ LQ+LVPGCDKVTGKA MLDEIINYVQ LQ QVEFLSMK+A
Sbjct: 170 DSHSLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIA 229
Query: 252 SVNPMF-YDFGMDL 264
+ NP+ +D DL
Sbjct: 230 ASNPVVNFDIVEDL 243
>gi|302766193|ref|XP_002966517.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
gi|302801203|ref|XP_002982358.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300149950|gb|EFJ16603.1| hypothetical protein SELMODRAFT_72704 [Selaginella moellendorffii]
gi|300165937|gb|EFJ32544.1| hypothetical protein SELMODRAFT_72702 [Selaginella moellendorffii]
Length = 102
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/90 (84%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Query: 175 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPPK DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEII
Sbjct: 7 EPPKQDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEII 66
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
NYVQ LQ QVEFLSMKLA+VNP D +D
Sbjct: 67 NYVQSLQRQVEFLSMKLAAVNPRL-DINLD 95
>gi|449447083|ref|XP_004141299.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 249
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 109/168 (64%), Gaps = 17/168 (10%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A+ P ++YIHVRARRGQAT+SHSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEI
Sbjct: 69 AEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 128
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD-----NTFMVRPDDQQNLN---SIIAA 284
INYVQ LQ QVEFLSMKLA+VNP D +D++ + F +R L + A
Sbjct: 129 INYVQSLQQQVEFLSMKLATVNP---DVNVDIERILSKDIFNIRGSSGNVLGFDPGLSAV 185
Query: 285 SASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTAL--LLQQG 330
S P +++ T+T F P +L++ L LLQ G
Sbjct: 186 SPVPPHRMFQFQGTMSSMPTTSTQFPPMPQT----MLESDLQSLLQMG 229
>gi|449509268|ref|XP_004163540.1| PREDICTED: transcription factor bHLH74-like [Cucumis sativus]
Length = 402
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/168 (51%), Positives = 109/168 (64%), Gaps = 17/168 (10%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A+ P ++YIHVRARRGQAT+SHSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEI
Sbjct: 222 AEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEI 281
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD-----NTFMVRPDDQQNLN---SIIAA 284
INYVQ LQ QVEFLSMKLA+VNP D +D++ + F +R L + A
Sbjct: 282 INYVQSLQQQVEFLSMKLATVNP---DVNVDIERILSKDIFNIRGSSGNVLGFDPGLSAV 338
Query: 285 SASAPQVQCSPTAQLTAFADTTTAFAPADHRNNYPVLDTAL--LLQQG 330
S P +++ T+T F P +L++ L LLQ G
Sbjct: 339 SPVPPHRMFQFQGTMSSMPTTSTQFPPMPQT----MLESDLQSLLQMG 382
>gi|224067162|ref|XP_002302386.1| predicted protein [Populus trichocarpa]
gi|222844112|gb|EEE81659.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 156/310 (50%), Gaps = 30/310 (9%)
Query: 24 GSFFSQLYYPPKFPT--HDDHQEMIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEP 81
GS F +L PKFP + EM+ S L + + T C N++ +++ ++
Sbjct: 15 GSGFVELV--PKFPGFGSGNFSEMV----GSLGLTECGQITHTGCPPNYNKEANNAQHQE 68
Query: 82 SNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPRE 141
S T ++ ++V +S + RK+ + S +E
Sbjct: 69 DQQLSEETSIGASPNGKRRKRVPESNSPLDPNKNTEGELRKDLSGESCDIA-------KE 121
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
+ K QK K+ + +A + + + P ++Y HVRARRGQAT+SHSLAERVR
Sbjct: 122 LDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVR 181
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
REKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 182 REKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPE----- 236
Query: 262 MDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQ------LTAFADTTTAFAPADHR 315
+ +D ++ D + A +P + P + + ++ F+PA H
Sbjct: 237 LQIDVERILSKDILHSRGGNAAILGFSPGISSHPYSHRIFQPGIQVIPNSNPQFSPAPHA 296
Query: 316 NNYPVLDTAL 325
VLD L
Sbjct: 297 ----VLDNEL 302
>gi|3096922|emb|CAA18832.1| putative protein [Arabidopsis thaliana]
gi|7270403|emb|CAB80170.1| putative protein [Arabidopsis thaliana]
Length = 324
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Query: 160 KENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
+EN+ DS KV KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPG
Sbjct: 149 EENNFSNDS-SKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPG 207
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
CDK+TGKA MLDEIINYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 208 CDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR-PDFDMD 251
>gi|20127066|gb|AAM10952.1|AF488596_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Query: 160 KENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
+EN+ DS KV KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPG
Sbjct: 149 EENNFSNDS-SKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPG 207
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
CDK+TGKA MLDEIINYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 208 CDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR-PDFDMD 251
>gi|125664136|gb|ABN51065.1| basic helix-loop-helix protein [Sesamum indicum]
Length = 400
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 122/203 (60%), Gaps = 23/203 (11%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVN------DAKKEEKENSPKADSEQK 171
+ KRK R N Q++D E+ + +K N A KE K+NS A++ ++
Sbjct: 171 NGKRK-RKNVEVEKQKDQTRDLAELPKEYDEKKNSGPSSRSRQAVKEAKDNSSGAEASKE 229
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
+YIHVRA+RGQAT+SHSLAERVRRE+ISERM++LQ+LVPGC+K+TGKA MLDE
Sbjct: 230 -------NYIHVRAKRGQATNSHSLAERVRRERISERMRLLQELVPGCNKITGKAVMLDE 282
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD-----NTFMVRPDDQQNLNSIIAASA 286
IINYVQ LQ QVEFLSMKLA+VNP + +D++ + R + L S+
Sbjct: 283 IINYVQSLQQQVEFLSMKLATVNP---ELNVDIERLLSKDILHSRGSNATALGIGPGLSS 339
Query: 287 SAPQVQCSPTAQLTAFADTTTAF 309
S P Q P L AF T F
Sbjct: 340 SHP-FQGLPQGTLNAFPGTAPQF 361
>gi|21539493|gb|AAM53299.1| unknown protein [Arabidopsis thaliana]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Query: 160 KENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
+EN+ DS KV KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPG
Sbjct: 149 EENNFSNDS-SKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPG 207
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
CDK+TGKA MLDEIINYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 208 CDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR-PDFDMD 251
>gi|22329164|ref|NP_195179.2| transcription factor bHLH63 [Arabidopsis thaliana]
gi|75299602|sp|Q8GY61.1|BH063_ARATH RecName: Full=Transcription factor bHLH63; AltName: Full=Basic
helix-loop-helix protein 63; Short=AtbHLH63; Short=bHLH
63; AltName: Full=Transcription factor EN 84; AltName:
Full=bHLH transcription factor bHLH063
gi|26450757|dbj|BAC42487.1| putative bHLH transcription factor bHLH063 [Arabidopsis thaliana]
gi|28950907|gb|AAO63377.1| At4g34530 [Arabidopsis thaliana]
gi|332660989|gb|AEE86389.1| transcription factor bHLH63 [Arabidopsis thaliana]
Length = 335
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/105 (77%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
Query: 160 KENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
+EN+ DS KV KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPG
Sbjct: 149 EENNFSNDS-SKVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPG 207
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
CDK+TGKA MLDEIINYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 208 CDKITGKAGMLDEIINYVQSLQRQIEFLSMKLAIVNPR-PDFDMD 251
>gi|297802514|ref|XP_002869141.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
gi|297314977|gb|EFH45400.1| hypothetical protein ARALYDRAFT_491205 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/154 (59%), Positives = 105/154 (68%), Gaps = 4/154 (2%)
Query: 111 TATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQ 170
T T R +KK+K + +SK E+ + K K +++EN+ DS
Sbjct: 98 TETKDRNEKKKKMNREEVTEEEEEKSK-ITELNNGSPKSIKKMKNKAKKEENNCSNDS-S 155
Query: 171 KVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
KV KE K DYIHVRARRGQATDSHS+AERVRREKISERMK LQ LVPGCDK+TGKA ML
Sbjct: 156 KVTKELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGML 215
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
DEIINYVQ LQ Q+EFLSMKLA VNP DF MD
Sbjct: 216 DEIINYVQSLQRQIEFLSMKLAVVNPR-PDFDMD 248
>gi|255547017|ref|XP_002514566.1| conserved hypothetical protein [Ricinus communis]
gi|223546170|gb|EEF47672.1| conserved hypothetical protein [Ricinus communis]
Length = 566
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 173 AKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
A +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDE
Sbjct: 360 ASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 419
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
IINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 420 IINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 450
>gi|297849334|ref|XP_002892548.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
gi|297338390|gb|EFH68807.1| hypothetical protein ARALYDRAFT_888270 [Arabidopsis lyrata subsp.
lyrata]
Length = 364
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 99/133 (74%), Gaps = 11/133 (8%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
+DP+ + QKK + ND KE + E ++E PK+ YIH+RARRGQAT+SHS
Sbjct: 164 EDPQRGSDQSQKK-HKNDQSKE------TVNKESSQSEEAPKENYIHMRARRGQATNSHS 216
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 217 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 276
Query: 256 MFYDFGMDLDNTF 268
+ +D+D
Sbjct: 277 ---EINIDIDRIL 286
>gi|116787273|gb|ABK24441.1| unknown [Picea sitchensis]
Length = 320
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 103/148 (69%), Gaps = 13/148 (8%)
Query: 158 EEKENSPK--ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E E+ PK D+ + + +DYIHVRARRGQATDSHSLAERVRREKISERMK+LQ L
Sbjct: 95 ETAESCPKQTVDNAKPSSVSVKQDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDL 154
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQ 275
VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP +++ ++ R Q
Sbjct: 155 VPGCNKVTGKAVMLDEIINYVQALQCQVEFLSMKLAAVNP---QLDCNVEGGYLTRDVLQ 211
Query: 276 QNLNSI--------IAASASAPQVQCSP 295
+ +SI AA++ Q+Q +P
Sbjct: 212 PHCSSISKMFAPDTTAAASQINQLQKTP 239
>gi|110738493|dbj|BAF01172.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 314
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 99/133 (74%), Gaps = 11/133 (8%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
+DP+ + QKK + ND KE + E ++E PK+ YIH+RARRGQAT+SHS
Sbjct: 114 EDPQRGNDQSQKK-HKNDQSKE------TVNKESSQSEEAPKENYIHMRARRGQATNSHS 166
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 167 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 226
Query: 256 MFYDFGMDLDNTF 268
+ +D+D
Sbjct: 227 ---EINIDIDRIL 236
>gi|79318615|ref|NP_001031093.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|45935021|gb|AAS79545.1| putative transcription factor [Arabidopsis thaliana]
gi|46367460|emb|CAG25856.1| hypothetical protein [Arabidopsis thaliana]
gi|332192548|gb|AEE30669.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 339
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKD-----YIHVRARRGQATDSHSLAERVRREKISERMK 210
KK++ E SP +++ + +++ P D YIH+RARRGQAT+SHSLAERVRREKISERMK
Sbjct: 140 KKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMK 199
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
LQ LVPGCDKVTGKA MLDEIINYVQ LQ Q+EFLSMKL++VNP+ DF ++
Sbjct: 200 FLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVL-DFNLE 251
>gi|302774124|ref|XP_002970479.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
gi|302793582|ref|XP_002978556.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300153905|gb|EFJ20542.1| hypothetical protein SELMODRAFT_108937 [Selaginella moellendorffii]
gi|300161995|gb|EFJ28609.1| hypothetical protein SELMODRAFT_93546 [Selaginella moellendorffii]
Length = 125
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 79/100 (79%), Gaps = 9/100 (9%)
Query: 160 KENS-PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
KENS P A + Q DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPG
Sbjct: 17 KENSKPGAGNTQ--------DYIHVRARRGQATDSHSLAERVRREKISERMKTLQDLVPG 68
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
C KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+V P Y
Sbjct: 69 CSKVTGKAMMLDEIINYVQSLQRQVEFLSMKLAAVKPALY 108
>gi|356577684|ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 435
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 110/178 (61%), Gaps = 17/178 (9%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K ++ N D + ++ K ++ + + P +++IHVRARRGQAT+SHSLAERVRR
Sbjct: 229 KRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRGQATNSHSLAERVRR 288
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
EKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP +
Sbjct: 289 EKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP---ELNF 345
Query: 263 DLDNTFMVRPDDQQNLNSII--AASASAPQVQCSPT-------AQLTAFADTTTAFAP 311
D+D + L S I A P + S T L + T++ F P
Sbjct: 346 DVDRIL-----SKDILQSRIGHGIGAYGPGINSSHTFPNGSFHGTLAGMSSTSSQFPP 398
>gi|79340401|ref|NP_172483.4| transcription factor bHLH74 [Arabidopsis thaliana]
gi|75291341|sp|Q6NKN9.1|BH074_ARATH RecName: Full=Transcription factor bHLH74; AltName: Full=Basic
helix-loop-helix protein 74; Short=AtbHLH74; Short=bHLH
74; AltName: Full=Transcription factor EN 90; AltName:
Full=bHLH transcription factor bHLH074
gi|46931340|gb|AAT06474.1| At1g10120 [Arabidopsis thaliana]
gi|62320956|dbj|BAD93978.1| bHLH transcription factor like protein [Arabidopsis thaliana]
gi|332190423|gb|AEE28544.1| transcription factor bHLH74 [Arabidopsis thaliana]
Length = 366
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 99/133 (74%), Gaps = 11/133 (8%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
+DP+ + QKK + ND KE + E ++E PK+ YIH+RARRGQAT+SHS
Sbjct: 166 EDPQRGNDQSQKK-HKNDQSKE------TVNKESSQSEEAPKENYIHMRARRGQATNSHS 218
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 219 LAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 278
Query: 256 MFYDFGMDLDNTF 268
+ +D+D
Sbjct: 279 ---EINIDIDRIL 288
>gi|356552284|ref|XP_003544498.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 429
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/135 (57%), Positives = 98/135 (72%), Gaps = 7/135 (5%)
Query: 136 SKDPREVKSKKQKKGNVNDAKKEEKENSPK--ADSEQKVAKEPPKDYIHVRARRGQATDS 193
S P+E +K+ KG N+ + S K D+ + + P +++IHVRARRGQAT+S
Sbjct: 216 SNGPKE--HEKRPKGEQNNGADVRGKQSVKQAKDNNSQSGEAPKENFIHVRARRGQATNS 273
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASV 253
HSLAERVRREKISERM++LQ+LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+V
Sbjct: 274 HSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATV 333
Query: 254 NPMFYDFGMDLDNTF 268
NP + D+D
Sbjct: 334 NP---ELNFDVDRIL 345
>gi|297819388|ref|XP_002877577.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
gi|297323415|gb|EFH53836.1| hypothetical protein ARALYDRAFT_347878 [Arabidopsis lyrata subsp.
lyrata]
Length = 260
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 101/159 (63%), Gaps = 12/159 (7%)
Query: 105 QSTVTTTATTTRMDKKRKNRTNASSS----FNSAQSKDPREVKSKKQKK-----GNVNDA 155
+STVT R KR+ T+ S F+S S + + SKK+ K G D
Sbjct: 56 ESTVTEQTGGGR---KRRALTSQDESSKMMFSSCTSVNRLKESSKKKMKVCLSEGETEDG 112
Query: 156 KKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
+ E E S S++ K P KDYIHVRARRGQATD HSLAER RREKISERMK LQ L
Sbjct: 113 LRREGETSSGGGSKETEEKSPLKDYIHVRARRGQATDRHSLAERARREKISERMKFLQDL 172
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
+PGC+K+ GKA +LDEIINY+Q LQ QVEFLSMKL VN
Sbjct: 173 IPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKLEIVN 211
>gi|356526880|ref|XP_003532044.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 273
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/142 (59%), Positives = 97/142 (68%), Gaps = 3/142 (2%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQ--KVA 173
R D + + S+ N+ D + VK + + G K E E S +EQ K A
Sbjct: 76 RRDSEEDDSAKGVSTSNAVNEGDGKRVKGNRNEGGGDGGNNKGEGEVSSGKPAEQSAKPA 135
Query: 174 KEPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
EPPK DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEI
Sbjct: 136 SEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEI 195
Query: 233 INYVQFLQNQVEFLSMKLASVN 254
INY+Q LQ QVEFLSMKL +VN
Sbjct: 196 INYIQSLQRQVEFLSMKLEAVN 217
>gi|125578091|gb|EAZ19313.1| hypothetical protein OsJ_34859 [Oryza sativa Japonica Group]
Length = 311
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/108 (73%), Positives = 84/108 (77%), Gaps = 17/108 (15%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK----------- 221
A EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC+K
Sbjct: 135 AGEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVAKFSQKINLN 194
Query: 222 ---VTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
VTGKA MLDEIINYVQ LQ QVEFLSMKL++VNP DF D+DN
Sbjct: 195 FTLVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQL-DF--DVDN 239
>gi|242045042|ref|XP_002460392.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
gi|241923769|gb|EER96913.1| hypothetical protein SORBIDRAFT_02g027430 [Sorghum bicolor]
Length = 438
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 89/129 (68%), Gaps = 10/129 (7%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
A S+ S SKD E S G K KE S QK +DYIHVRAR
Sbjct: 210 ADSANESVHSKDKGEESSPATTTGPGKSKGKGAKETS----ESQK------EDYIHVRAR 259
Query: 187 RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
RGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFL
Sbjct: 260 RGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFL 319
Query: 247 SMKLASVNP 255
SMKLA+VNP
Sbjct: 320 SMKLATVNP 328
>gi|15222679|ref|NP_173950.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|42571645|ref|NP_973913.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|75308803|sp|Q9C670.1|BH076_ARATH RecName: Full=Transcription factor bHLH76; AltName: Full=Basic
helix-loop-helix protein 76; Short=AtbHLH76; Short=bHLH
76; AltName: Full=Transcription factor EN 83; AltName:
Full=bHLH transcription factor bHLH076
gi|12321176|gb|AAG50678.1|AC079829_11 bHLH transcription factor GBOF-1, putative [Arabidopsis thaliana]
gi|26449804|dbj|BAC42025.1| putative transcription factor bHLH076 [Arabidopsis thaliana]
gi|28950949|gb|AAO63398.1| At1g26260 [Arabidopsis thaliana]
gi|332192546|gb|AEE30667.1| transcription factor bHLH76 [Arabidopsis thaliana]
gi|332192547|gb|AEE30668.1| transcription factor bHLH76 [Arabidopsis thaliana]
Length = 390
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 75/113 (66%), Positives = 92/113 (81%), Gaps = 6/113 (5%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKD-----YIHVRARRGQATDSHSLAERVRREKISERMK 210
KK++ E SP +++ + +++ P D YIH+RARRGQAT+SHSLAERVRREKISERMK
Sbjct: 191 KKQKDEQSPTSNANKTNSEKQPSDSLKDGYIHMRARRGQATNSHSLAERVRREKISERMK 250
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
LQ LVPGCDKVTGKA MLDEIINYVQ LQ Q+EFLSMKL++VNP+ DF ++
Sbjct: 251 FLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVL-DFNLE 302
>gi|414591363|tpg|DAA41934.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 448
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 81/103 (78%), Gaps = 5/103 (4%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 332
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNS 280
LQ QVEFLSMKL++V+P +LD V P D + +
Sbjct: 333 SLQCQVEFLSMKLSTVDPR-----RELDVGCFVVPKDDVTMQA 370
>gi|356498105|ref|XP_003517894.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 264
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 84/116 (72%), Gaps = 11/116 (9%)
Query: 150 GNVNDAKKEEKENSPKADSEQKVAK----------EPPK-DYIHVRARRGQATDSHSLAE 198
G V D K+ + S K + E K EPPK DYIHVRARRGQATDSHSLAE
Sbjct: 93 GGVGDGKRVKTSESGKGEGETSSGKLAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAE 152
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
R RREKISERMKILQ +VPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 153 RARREKISERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 208
>gi|356495611|ref|XP_003516668.1| PREDICTED: transcription factor bHLH49-like [Glycine max]
Length = 414
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/92 (80%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Query: 173 AKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
A +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDE
Sbjct: 210 ASDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDE 269
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
IINYVQ LQ QVEFLSMKLA+VNP DF ++
Sbjct: 270 IINYVQSLQRQVEFLSMKLATVNPRL-DFNIE 300
>gi|357158920|ref|XP_003578282.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 415
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 77/107 (71%), Positives = 87/107 (81%), Gaps = 6/107 (5%)
Query: 155 AKKEEKENSPK----ADSEQKVAKEPPK--DYIHVRARRGQATDSHSLAERVRREKISER 208
+K + +E+SP S+ K AKE + DYIHVRARRGQAT+SHSLAER+RREKISER
Sbjct: 207 SKDKGEESSPATTTTGKSKGKGAKESSEKEDYIHVRARRGQATNSHSLAERLRREKISER 266
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
MK+LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 267 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 313
>gi|356508360|ref|XP_003522925.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 398
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/91 (83%), Positives = 78/91 (85%), Gaps = 2/91 (2%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A E P DYIHVRARRGQATDSHSLAERVRREKISERM LQ LVPGC+KVTGKA MLDEI
Sbjct: 185 ASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMNYLQDLVPGCNKVTGKAGMLDEI 243
Query: 233 INYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
INYVQ LQ QVEFLSMKLA+VNP DF MD
Sbjct: 244 INYVQSLQRQVEFLSMKLAAVNPRL-DFSMD 273
>gi|226492880|ref|NP_001152266.1| BHLH transcription factor [Zea mays]
gi|195654447|gb|ACG46691.1| BHLH transcription factor [Zea mays]
Length = 428
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 74/103 (71%), Positives = 81/103 (78%), Gaps = 5/103 (4%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 253 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 312
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNS 280
LQ QVEFLSMKL++V+P +LD V P D + +
Sbjct: 313 SLQCQVEFLSMKLSTVDPR-----RELDVGCFVVPKDDVTMQA 350
>gi|449434704|ref|XP_004135136.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 561
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 103/168 (61%), Gaps = 12/168 (7%)
Query: 102 QVTQSTVTTTATTTRMDKKRKNRT-----NASSSFNSAQSKDPREVKSKKQKKGNVNDAK 156
+ T ++T TR K+ +T N + KD E + K+ + N K
Sbjct: 287 EATGKELSTKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANK 346
Query: 157 KEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
K + +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ+L
Sbjct: 347 GTGKHGK-----QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQEL 401
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
VPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP D +D
Sbjct: 402 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DINID 448
>gi|297851058|ref|XP_002893410.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297339252|gb|EFH69669.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 347
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/145 (56%), Positives = 102/145 (70%), Gaps = 9/145 (6%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE---NSPKADSEQKVAKEPPK 178
K +S FNS + K + K +G + +K+E+ N K +SE++ +
Sbjct: 109 KCGVTSSKGFNSKKRK-----RIGKDCEGEEDKMQKDEQSSNSNVNKTNSEKQASDSLKD 163
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
YIH+RARRGQAT+SHSLAERVRREKISERMK LQ LVPGCDKVTGKA MLDEIINYVQ
Sbjct: 164 GYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQS 223
Query: 239 LQNQVEFLSMKLASVNPMFYDFGMD 263
LQ Q+EFLSMKL++VNP+ DF ++
Sbjct: 224 LQCQIEFLSMKLSAVNPVL-DFNLE 247
>gi|414589749|tpg|DAA40320.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 453
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 79/91 (86%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
+ E++V + +DYIH+RARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTG
Sbjct: 238 RGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTG 297
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
KA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 298 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 328
>gi|449493518|ref|XP_004159328.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 517
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 103/168 (61%), Gaps = 12/168 (7%)
Query: 102 QVTQSTVTTTATTTRMDKKRKNRT-----NASSSFNSAQSKDPREVKSKKQKKGNVNDAK 156
+ T ++T TR K+ +T N + KD E + K+ + N K
Sbjct: 243 EATGKELSTKGLGTRKRKRSGQKTELDQANGPLQQTTVSPKDDAETQRKRDQNPNSTANK 302
Query: 157 KEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
K + +PPK+ YIHVRARRGQAT+SHSLAERVRREKISERMK LQ+L
Sbjct: 303 GTGKHGK-----QASQPSDPPKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQEL 357
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
VPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP D +D
Sbjct: 358 VPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRL-DINID 404
>gi|326489817|dbj|BAJ93982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 427
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/139 (60%), Positives = 94/139 (67%), Gaps = 13/139 (9%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAK-KEEKENSPKADSEQKVAKEP 176
D+ + + A S+ S QSKD E S +K K KE S K
Sbjct: 187 DQVQSSNVAADSANESVQSKDKGEESSPATGTTTGGRSKGKGAKEGSEK----------- 235
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
+DYIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYV
Sbjct: 236 -EDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYV 294
Query: 237 QFLQNQVEFLSMKLASVNP 255
Q LQ QVEFLSMKLA+VNP
Sbjct: 295 QSLQRQVEFLSMKLATVNP 313
>gi|339716200|gb|AEJ88339.1| putative MYC protein [Tamarix hispida]
Length = 301
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/80 (86%), Positives = 72/80 (90%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIIN
Sbjct: 161 EPPKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIIN 220
Query: 235 YVQFLQNQVEFLSMKLASVN 254
Y+Q LQ QVEFLSMKL VN
Sbjct: 221 YIQSLQRQVEFLSMKLEVVN 240
>gi|297744394|emb|CBI37656.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
KV++ DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 133 KVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 192
Query: 231 EIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
EIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 193 EIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 224
>gi|226508342|ref|NP_001152551.1| DNA binding protein [Zea mays]
gi|195657419|gb|ACG48177.1| DNA binding protein [Zea mays]
Length = 454
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 79/91 (86%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
+ E++V + +DYIH+RARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTG
Sbjct: 239 RGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTG 298
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
KA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 299 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 329
>gi|125557558|gb|EAZ03094.1| hypothetical protein OsI_25238 [Oryza sativa Indica Group]
gi|125599428|gb|EAZ39004.1| hypothetical protein OsJ_23423 [Oryza sativa Japonica Group]
Length = 256
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 83/138 (60%), Positives = 96/138 (69%), Gaps = 8/138 (5%)
Query: 125 TNASSSFNSAQSKD---PREVKSKKQKKGNVNDAKKEE----KENSPKADSEQKVAKEPP 177
T+A+S +D P + K K + ND+ + E NS KA + EPP
Sbjct: 62 TSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPP 121
Query: 178 K-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
K DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 181
Query: 237 QFLQNQVEFLSMKLASVN 254
Q LQ+QVEFLSMKL +VN
Sbjct: 182 QSLQHQVEFLSMKLEAVN 199
>gi|168023966|ref|XP_001764508.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684372|gb|EDQ70775.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 679
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 110/177 (62%), Gaps = 19/177 (10%)
Query: 98 STEQQVTQSTVTTTATTTRMDK--KRKNRTNASSSFNSAQSKDPR--EVKSKKQKKGNVN 153
++ +++ T++ +T D+ R R S+ N S DP+ +V++ K K+
Sbjct: 284 GSQGEISPDTISPARSTPPQDEPASRNKRKKPSTIDNDLASPDPKVGDVENSKAKRCKGE 343
Query: 154 DAKKEEKENS---------------PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAE 198
D K + K P+ ++ QK + +DYIHVRARRGQATDSHSLAE
Sbjct: 344 DTKSDCKGERSSSEISSESAGSPKVPQKENNQKAKEFSKQDYIHVRARRGQATDSHSLAE 403
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
RVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVE LSMK+ASVNP
Sbjct: 404 RVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQVESLSMKVASVNP 460
>gi|225428454|ref|XP_002284113.1| PREDICTED: transcription factor bHLH63-like [Vitis vinifera]
Length = 456
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 80/93 (86%), Gaps = 1/93 (1%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
KV++ DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 244 KVSEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 303
Query: 231 EIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
EIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 304 EIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 335
>gi|293332515|ref|NP_001169165.1| uncharacterized protein LOC100383015 [Zea mays]
gi|223975273|gb|ACN31824.1| unknown [Zea mays]
Length = 443
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 79/91 (86%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
+ E++V + +DYIH+RARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTG
Sbjct: 228 RGKGEKEVPESQKEDYIHIRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTG 287
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
KA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 288 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 318
>gi|116787019|gb|ABK24344.1| unknown [Picea sitchensis]
Length = 467
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/152 (55%), Positives = 104/152 (68%), Gaps = 13/152 (8%)
Query: 119 KKRKNRTNASSSFNSAQ-SKDPREVKSKKQKKGNVND------AKKEEKENSPKADSEQK 171
KKR+ + S SA+ SK+P E K+K+ + G ++ + NS K +
Sbjct: 230 KKRRAK-----SLTSAENSKEPEEAKAKRCRLGESSEIDDDDNNDETSDSNSKKGKEKNS 284
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
+ +YIHVRARRGQATDSHSLAERVRREKI++RMK LQ LVP C+KVTGKA MLDE
Sbjct: 285 NVSQKDDNYIHVRARRGQATDSHSLAERVRREKINQRMKFLQDLVPTCNKVTGKAVMLDE 344
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
IINYVQ LQ+QVEFLSMKLA+VNP DF +D
Sbjct: 345 IINYVQSLQHQVEFLSMKLATVNPKL-DFNID 375
>gi|356517054|ref|XP_003527205.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 384
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 81/98 (82%), Gaps = 2/98 (2%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
A++ A E P DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGK
Sbjct: 169 AETSNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGK 227
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
A MLDEIINYVQ LQ QVEFLSMKLA+VNP D +D
Sbjct: 228 AGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DLSID 264
>gi|226504718|ref|NP_001150409.1| LOC100284039 [Zea mays]
gi|195639036|gb|ACG38986.1| protein SPATULA [Zea mays]
gi|414873439|tpg|DAA51996.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 255
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/134 (58%), Positives = 97/134 (72%), Gaps = 8/134 (5%)
Query: 129 SSFNSAQSKDPREVKSKKQK-------KGNVNDAKKEEKENSPKADSEQKVAKEPPK-DY 180
S+ +D ++++K+ K KG++ + + ++ KA S+ A EPPK DY
Sbjct: 64 STSGGGGGQDLTDLEAKRSKTNKSSNNKGSLRTEVETDSRSAGKAVSKNIPAAEPPKQDY 123
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMK+LQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 124 IHVRARRGQATDSHSLAERARREKISERMKVLQDLVPGCNKVIGKASVLDEIINYIQSLQ 183
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 184 CQVEFLSMKLEAVN 197
>gi|110741191|dbj|BAF02146.1| bHLH transcription factor like protein [Arabidopsis thaliana]
Length = 366
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/133 (59%), Positives = 98/133 (73%), Gaps = 11/133 (8%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
+DP+ + QKK + ND KE + E ++E PK+ YIH+RARRGQAT+SHS
Sbjct: 166 EDPQRGNDQSQKK-HKNDQSKE------TVNKESSQSEEAPKENYIHMRARRGQATNSHS 218
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAERVRREKISERM++LQ+L PGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 219 LAERVRREKISERMRLLQELAPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 278
Query: 256 MFYDFGMDLDNTF 268
+ +D+D
Sbjct: 279 ---EINIDIDRIL 288
>gi|357117085|ref|XP_003560305.1| PREDICTED: transcription factor bHLH74-like isoform 2 [Brachypodium
distachyon]
Length = 317
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 11/153 (7%)
Query: 119 KKRKNRTNASSSFNSAQSKDPR-EVKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKE 175
KKRK + +S N + D + EV S+ ++ ++ +E + SPK S++
Sbjct: 78 KKRKGIDDCTSLLNPSNVGDQQTEVSSQTER-----NSLEENRTISPKMQSKEDSSDGDG 132
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
+DY+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC K+TGKA MLDEIINY
Sbjct: 133 TKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIINY 192
Query: 236 VQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
VQ LQ QVEFLSMKLA+VNP + G D++
Sbjct: 193 VQSLQRQVEFLSMKLATVNP---ELGFDIEQIL 222
>gi|255543699|ref|XP_002512912.1| conserved hypothetical protein [Ricinus communis]
gi|223547923|gb|EEF49415.1| conserved hypothetical protein [Ricinus communis]
Length = 444
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/93 (79%), Positives = 79/93 (84%), Gaps = 1/93 (1%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
KV + DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 222 KVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 281
Query: 231 EIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
EIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 282 EIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 313
>gi|357473295|ref|XP_003606932.1| BHLH transcription factor [Medicago truncatula]
gi|355507987|gb|AES89129.1| BHLH transcription factor [Medicago truncatula]
Length = 344
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 99/142 (69%), Gaps = 16/142 (11%)
Query: 135 QSKDPR--------EVKSKKQKKGNVNDAKKEEKENSPKADSEQ-----KVAKEPPKDYI 181
+SKD R E K +Q KGN N K + +EN S++ ++ P DYI
Sbjct: 84 KSKDKRIKVSVEEGESKITEQIKGNKN-TKLKNRENCDDVGSKENSKGSEIQNHKP-DYI 141
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+ GKA MLDEIINYVQ LQ
Sbjct: 142 HVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQR 201
Query: 242 QVEFLSMKLASVNPMFYDFGMD 263
QVEFLSMKLA+VNP DF +D
Sbjct: 202 QVEFLSMKLAAVNPRL-DFNID 222
>gi|224105381|ref|XP_002313791.1| predicted protein [Populus trichocarpa]
gi|222850199|gb|EEE87746.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/98 (77%), Positives = 81/98 (82%), Gaps = 3/98 (3%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
KV + DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLD
Sbjct: 225 KVTEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLD 284
Query: 231 EIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
EIINYVQ LQ QVEFLSMKLA+VNP DF + DN F
Sbjct: 285 EIINYVQSLQRQVEFLSMKLAAVNPRL-DF--NFDNLF 319
>gi|326514032|dbj|BAJ92166.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 316
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 108/153 (70%), Gaps = 6/153 (3%)
Query: 119 KKRKNRTNASSSFN-SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKE 175
KKRK + + N SA SK+ + +++ + N +++ ++ SPK S++
Sbjct: 71 KKRKGTNDCIALLNPSASSKNVGDQQTEVSSQPESNSMERDNRKISPKTQSKEDSSDGDG 130
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
++Y+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC+K+TGKA MLDEIINY
Sbjct: 131 TKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKITGKAVMLDEIINY 190
Query: 236 VQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
VQ LQ QVEFLSMKLA+VNP + G D++
Sbjct: 191 VQSLQRQVEFLSMKLATVNP---ELGFDIEQIL 220
>gi|356500809|ref|XP_003519223.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 255
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 108/179 (60%), Gaps = 11/179 (6%)
Query: 81 PSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTR--MDKKRKNRTNASSSFNSAQSK- 137
P+ ++L + A T V + + A R +++ T +S+ N+
Sbjct: 27 PNAPDALGLRRAHFAPGPTRHAVPGRDLASIAPKKRRQAEEEEVESTRGASTTNAVDEGC 86
Query: 138 -DPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHS 195
D + VK+ + KG + + S K SE PPK DYIHVRARRGQATDSHS
Sbjct: 87 GDGKRVKTSESGKGEGESCSGKPAKQSGKPPSE------PPKQDYIHVRARRGQATDSHS 140
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
LAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 141 LAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 199
>gi|33339703|gb|AAQ14331.1|AF283506_1 MYC1 [Catharanthus roseus]
Length = 271
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 86/114 (75%), Gaps = 4/114 (3%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
E +K+ K G N E E+ + + K A+ P +DYIHVRARRGQATDSHSLAER
Sbjct: 106 EGDNKRLKTGGSN----ENHESKAEGEETAKPAEPPKQDYIHVRARRGQATDSHSLAERA 161
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 162 RREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 215
>gi|225424835|ref|XP_002272776.1| PREDICTED: transcription factor BPE-like [Vitis vinifera]
Length = 277
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Query: 73 HSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFN 132
H N +N + N+ + + V + + + + + S N
Sbjct: 41 HLGQNLGHFGDNAGVGGANREASGGGDDPMVLERSGGRKRRDAATEDEGGKAVSTSGGGN 100
Query: 133 SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQAT 191
A D + +K+ + N D+K E + +S K + + +PPK D+IHVRARRGQAT
Sbjct: 101 VANDCDGKRLKTSGSRDEN-RDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQAT 159
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 219
Query: 252 SVN 254
+VN
Sbjct: 220 AVN 222
>gi|449533331|ref|XP_004173629.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 456
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 83/104 (79%), Gaps = 8/104 (7%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
KENS KA QK DYIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC
Sbjct: 233 KENS-KASEVQK------PDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGC 285
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 286 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 328
>gi|414885894|tpg|DAA61908.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 434
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/91 (75%), Positives = 78/91 (85%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
K ++ ++ +DYIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTG
Sbjct: 235 KGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTG 294
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
KA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 295 KAVMLDEIINYVQSLQRQVEFLSMKLATVNP 325
>gi|147774847|emb|CAN69076.1| hypothetical protein VITISV_004761 [Vitis vinifera]
Length = 302
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Query: 73 HSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFN 132
H N +N + N+ + + V + + + + + S N
Sbjct: 41 HLGQNLGHFGDNAGVGGANREASGGGDDPMVLERSGGRKRRDAATEDEGGKAVSTSGGGN 100
Query: 133 SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQAT 191
A D + +K+ + N D+K E + +S K + + +PPK D+IHVRARRGQAT
Sbjct: 101 VANDCDGKRLKTSGSRDEN-RDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRARRGQAT 159
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL
Sbjct: 160 DSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLE 219
Query: 252 SVN 254
+VN
Sbjct: 220 AVN 222
>gi|255540845|ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
gi|223550602|gb|EEF52089.1| DNA binding protein, putative [Ricinus communis]
Length = 275
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 85/109 (77%), Gaps = 5/109 (4%)
Query: 151 NVNDAKKEEKENSPKAD---SEQ--KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
N N K E E S D +EQ K+++ P +DYIHVRARRGQATDSHSLAER RREKI
Sbjct: 109 NENGKSKAEVEASSANDKNAAEQNSKISEPPKQDYIHVRARRGQATDSHSLAERARREKI 168
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
SERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 169 SERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 217
>gi|115448177|ref|NP_001047868.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|41053096|dbj|BAD08039.1| putative bHLH transcription factor [Oryza sativa Japonica Group]
gi|113537399|dbj|BAF09782.1| Os02g0705500 [Oryza sativa Japonica Group]
gi|215767339|dbj|BAG99567.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 84/106 (79%), Gaps = 3/106 (2%)
Query: 155 AKKEEKENSPK---ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
AKK+ + SPK A S V DYIHVRARRGQATDSHSLAERVRRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
LQ+LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMK+A+ NP+
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVV 238
>gi|218191430|gb|EEC73857.1| hypothetical protein OsI_08622 [Oryza sativa Indica Group]
Length = 361
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 84/106 (79%), Gaps = 3/106 (2%)
Query: 155 AKKEEKENSPK---ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
AKK+ + SPK A S V DYIHVRARRGQATDSHSLAERVRRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
LQ+LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMK+A+ NP+
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVV 238
>gi|297734057|emb|CBI15304.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 93/134 (69%), Gaps = 9/134 (6%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS----EQKVAKEPPKDY 180
T++ S N++ K + K + + N K E E S A E K A++ +DY
Sbjct: 85 TSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDY 139
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 140 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 199
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 200 RQVEFLSMKLEAVN 213
>gi|225456604|ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
Length = 284
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 93/134 (69%), Gaps = 9/134 (6%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS----EQKVAKEPPKDY 180
T++ S N++ K + K + + N K E E S A E K A++ +DY
Sbjct: 100 TSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDY 154
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ
Sbjct: 155 IHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQ 214
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 215 RQVEFLSMKLEAVN 228
>gi|449461645|ref|XP_004148552.1| PREDICTED: transcription factor bHLH63-like [Cucumis sativus]
Length = 523
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 79/104 (75%), Positives = 83/104 (79%), Gaps = 8/104 (7%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
KENS KA QK DYIHVRARRGQATDSHSLAER RREKISERMK LQ LVPGC
Sbjct: 233 KENS-KASEVQK------PDYIHVRARRGQATDSHSLAERARREKISERMKYLQDLVPGC 285
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 286 NKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNVD 328
>gi|168039065|ref|XP_001772019.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676620|gb|EDQ63100.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 147
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 75/96 (78%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
Query: 162 NSPKA--DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
SP+A DS + +DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC
Sbjct: 31 GSPRALKDSNNRNKILSKQDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 90
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
+KVTGKA MLDEIINYVQ LQ QVE LSMKLASVNP
Sbjct: 91 NKVTGKAVMLDEIINYVQSLQRQVESLSMKLASVNP 126
>gi|224072488|ref|XP_002303756.1| predicted protein [Populus trichocarpa]
gi|222841188|gb|EEE78735.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 143/257 (55%), Gaps = 46/257 (17%)
Query: 1 MAAFSYQQHH-----HPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNL 55
MA FSYQQ H F LDS+ I G+ FS P P ++ QE +
Sbjct: 1 MAVFSYQQQHPASVVDEFQLDSNTNIASGTLFS-----PNLP-YECLQE---------SS 45
Query: 56 LDAAAVFETSCGDNHDHHSDDN-------CNEPSNNNSLATKNQSTAVSSTEQQVTQSTV 108
L A + ET H+DDN + ++++ A N S+++ + Q ++ V
Sbjct: 46 LHAERILETI-------HADDNSIAKVPFISTTYHSSTTARHNSSSSMVADLQYCEENRV 98
Query: 109 TTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS 168
+ T T + + RK+ +S K RE K++K N+N + + A
Sbjct: 99 SQAMTPT-LWQLRKH--------SSPAIKVKRE---SKRQKLNLNSSVSRNAKRVRPAKK 146
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
++KV EPP Y+HVRARRG+ATDSHSLAERVRREKIS RMK+LQ LVPGCDK+TGKA +
Sbjct: 147 QKKVPVEPPTGYVHVRARRGEATDSHSLAERVRREKISSRMKLLQSLVPGCDKITGKALV 206
Query: 229 LDEIINYVQFLQNQVEF 245
LDEII+YVQFL+++V+
Sbjct: 207 LDEIISYVQFLKDRVQV 223
>gi|356516734|ref|XP_003527048.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 269
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/107 (71%), Positives = 82/107 (76%), Gaps = 5/107 (4%)
Query: 153 NDAKKEEKENSPKAD---SEQ--KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
ND K E E S SEQ K + P +DYIHVRARRGQATDSHSLAER RREKISE
Sbjct: 104 NDGFKAEAEASSAGGNKSSEQSNKPCEAPKQDYIHVRARRGQATDSHSLAERARREKISE 163
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
RMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 164 RMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 210
>gi|356545203|ref|XP_003541034.1| PREDICTED: transcription factor bHLH63-like [Glycine max]
Length = 402
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 2/104 (1%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
+E S +V + P DYIHVRARRGQATDSHSLAERVRREKISERMK LQ L+PGC
Sbjct: 170 RETSADTSKGSEVQNQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGC 228
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 229 NKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 271
>gi|297735141|emb|CBI17503.3| unnamed protein product [Vitis vinifera]
Length = 366
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/123 (62%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
E K +K K+ + K E+++S + + KV+ P DYIHVRARRGQATDSHSLAER
Sbjct: 148 ECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERA 207
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
RREKIS++MK LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLS+KLA++NP DF
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPR-TDF 266
Query: 261 GMD 263
+D
Sbjct: 267 NLD 269
>gi|326506812|dbj|BAJ91447.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510963|dbj|BAJ91829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 87/122 (71%), Gaps = 8/122 (6%)
Query: 135 QSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSH 194
Q +DP E KG K ++ A + QK DYIHVRARRGQATDSH
Sbjct: 110 QLRDPDEAGGAA--KGRPEKPKACARKKPEAAAAGQKT------DYIHVRARRGQATDSH 161
Query: 195 SLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
SLAERVRRE+ISERM+ LQ+LVPGCDKVTGKA MLDEIINYVQ LQ QVEFLSMK+A+ N
Sbjct: 162 SLAERVRRERISERMRYLQELVPGCDKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAAAN 221
Query: 255 PM 256
P+
Sbjct: 222 PV 223
>gi|296086467|emb|CBI32056.3| unnamed protein product [Vitis vinifera]
Length = 208
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 93/128 (72%), Gaps = 2/128 (1%)
Query: 128 SSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRAR 186
S N A D + +K+ + N D+K E + +S K + + +PPK D+IHVRAR
Sbjct: 27 SGGGNVANDCDGKRLKTSGSRDEN-RDSKTEVETSSGKPVEQNPQSADPPKQDFIHVRAR 85
Query: 187 RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
RGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFL
Sbjct: 86 RGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFL 145
Query: 247 SMKLASVN 254
SMKL +VN
Sbjct: 146 SMKLEAVN 153
>gi|357119169|ref|XP_003561318.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 240
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 76/122 (62%), Positives = 88/122 (72%), Gaps = 5/122 (4%)
Query: 138 DPREVKSKKQKK----GNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQATD 192
DP E + KK + GN+ + + N+ K EPPK DYIHVRARRGQATD
Sbjct: 62 DPEEKRLKKMESDSADGNLRTNAQTDSGNASKVVDRNPTPPEPPKQDYIHVRARRGQATD 121
Query: 193 SHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
SHS+AER RREKISERMK+LQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +
Sbjct: 122 SHSIAERARREKISERMKMLQDLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEA 181
Query: 253 VN 254
VN
Sbjct: 182 VN 183
>gi|255646074|gb|ACU23524.1| unknown [Glycine max]
Length = 402
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 82/104 (78%), Gaps = 2/104 (1%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
+E S +V + P DYIHVRARRGQATDSHSLAERVRREKISERMK LQ L+PGC
Sbjct: 170 RETSADTSKGSEVQNQKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLIPGC 228
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 229 NKVAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPGL-DFNID 271
>gi|225430730|ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
Length = 362
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/123 (62%), Positives = 94/123 (76%), Gaps = 1/123 (0%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
E K +K K+ + K E+++S + + KV+ P DYIHVRARRGQATDSHSLAER
Sbjct: 148 ECKDQKIKRDEEEEESKIEEKHSEISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERA 207
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
RREKIS++MK LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLS+KLA++NP DF
Sbjct: 208 RREKISKKMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSLKLATMNPR-TDF 266
Query: 261 GMD 263
+D
Sbjct: 267 NLD 269
>gi|223702402|gb|ACN21632.1| putative basic helix-loop-helix protein BHLH7 [Lotus japonicus]
Length = 340
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 69/79 (87%), Positives = 72/79 (91%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+K+TGKA MLDEIINYVQ
Sbjct: 163 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 222
Query: 239 LQNQVEFLSMKLASVNPMF 257
LQ QVEFLSMKLA+VNP
Sbjct: 223 LQRQVEFLSMKLATVNPAL 241
>gi|115479723|ref|NP_001063455.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|50726625|dbj|BAD34345.1| TA1 protein-like [Oryza sativa Japonica Group]
gi|113631688|dbj|BAF25369.1| Os09g0474100 [Oryza sativa Japonica Group]
gi|215768249|dbj|BAH00478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|323388941|gb|ADX60275.1| bHLH- transcription factor [Oryza sativa Japonica Group]
Length = 428
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
++YIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 238 FLQNQVEFLSMKLASVNP 255
LQ QVEFLSMKLA+VNP
Sbjct: 303 SLQRQVEFLSMKLATVNP 320
>gi|242033101|ref|XP_002463945.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
gi|241917799|gb|EER90943.1| hypothetical protein SORBIDRAFT_01g009380 [Sorghum bicolor]
Length = 315
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 87/113 (76%), Gaps = 10/113 (8%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
K + KE+S D ++ DY+HVRA+RGQAT+SHSLAER+RR+KISERMK+LQ L
Sbjct: 118 KMQSKEDSSDGDGTKE-------DYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
VPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP + G D++
Sbjct: 171 VPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP---ELGFDIEQII 220
>gi|218202318|gb|EEC84745.1| hypothetical protein OsI_31742 [Oryza sativa Indica Group]
Length = 428
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
++YIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 243 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 302
Query: 238 FLQNQVEFLSMKLASVNP 255
LQ QVEFLSMKLA+VNP
Sbjct: 303 SLQRQVEFLSMKLATVNP 320
>gi|357117083|ref|XP_003560304.1| PREDICTED: transcription factor bHLH74-like isoform 1 [Brachypodium
distachyon]
Length = 326
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 105/154 (68%), Gaps = 7/154 (4%)
Query: 119 KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVND--AKKEEKENSPKADSEQKV--AK 174
KKRK + +S N + S + V ++ + + + + +E + SPK S++
Sbjct: 78 KKRKGIDDCTSLLNPSASSRMQNVGDQQTEVSSQTERNSLEENRTISPKMQSKEDSSDGD 137
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+DY+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC K+TGKA MLDEIIN
Sbjct: 138 GTKEDYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIIN 197
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
YVQ LQ QVEFLSMKLA+VNP + G D++
Sbjct: 198 YVQSLQRQVEFLSMKLATVNP---ELGFDIEQIL 228
>gi|222623520|gb|EEE57652.1| hypothetical protein OsJ_08085 [Oryza sativa Japonica Group]
Length = 300
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/106 (70%), Positives = 84/106 (79%), Gaps = 3/106 (2%)
Query: 155 AKKEEKENSPK---ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
AKK+ + SPK A S V DYIHVRARRGQATDSHSLAERVRRE+ISERM+
Sbjct: 133 AKKKAEVASPKDSPATSASTVTAGQKTDYIHVRARRGQATDSHSLAERVRRERISERMRY 192
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
LQ+LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMK+A+ NP+
Sbjct: 193 LQELVPGCNKVTGKAGMLDEIINYVQSLQKQVEFLSMKIAASNPVV 238
>gi|356500821|ref|XP_003519229.1| PREDICTED: transcription factor BPE-like [Glycine max]
Length = 260
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQ--KVAKEPPK-DYIHVRARRGQATDSHSLAERVRREK 204
K+ +++ + +ENS +EQ K EPPK DYIHVRARRGQATDSHSLAER RREK
Sbjct: 95 KRIKASESGEGGRENSSGKPAEQSGKPPSEPPKQDYIHVRARRGQATDSHSLAERARREK 154
Query: 205 ISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
ISERMK LQ LVPGC+KV GKA +LDEIINY+Q LQ Q EFLSMKL +VN
Sbjct: 155 ISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLQRQAEFLSMKLEAVN 204
>gi|413938470|gb|AFW73021.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 340
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 93/141 (65%), Gaps = 13/141 (9%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA MLDEIINYVQ
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 239 LQNQVEFLSMKLASVNPMF-YD-----FGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQ 292
LQ QVEFLSMK+A+ NP+ +D FG L P Q S + S S Q
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQA--CGPAAGQLEPSCLQMSMSPMQQV 259
Query: 293 CSPTAQLTAFADTTTAFAPAD 313
P+A A +T F P D
Sbjct: 260 VHPSA-----AAGSTGFGPLD 275
>gi|224029073|gb|ACN33612.1| unknown [Zea mays]
gi|413938471|gb|AFW73022.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 350
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 93/141 (65%), Gaps = 13/141 (9%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA MLDEIINYVQ
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 239 LQNQVEFLSMKLASVNPMF-YD-----FGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQ 292
LQ QVEFLSMK+A+ NP+ +D FG L P Q S + S S Q
Sbjct: 202 LQKQVEFLSMKIAASNPVVSFDIVEDLFGRQLKQA--CGPAAGQLEPSCLQMSMSPMQQV 259
Query: 293 CSPTAQLTAFADTTTAFAPAD 313
P+A A +T F P D
Sbjct: 260 VHPSA-----AAGSTGFGPLD 275
>gi|356562791|ref|XP_003549652.1| PREDICTED: transcription factor bHLH79-like [Glycine max]
Length = 229
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 206
K G V DA P+ ++ +++PPK DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 65 KAGEV-DATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERARREKIS 123
Query: 207 ERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
ERMKILQ +VPGC+KV GKA +LDEIINY+Q LQ+QVEFLSMKL +VN
Sbjct: 124 ERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLSMKLEAVN 171
>gi|115455099|ref|NP_001051150.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|28273388|gb|AAO38474.1| putative Helix-loop-helix DNA-binding domain containing protein
[Oryza sativa Japonica Group]
gi|50428703|gb|AAT77054.1| putative DNA binding protein [Oryza sativa Japonica Group]
gi|108710880|gb|ABF98675.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549621|dbj|BAF13064.1| Os03g0728900 [Oryza sativa Japonica Group]
gi|125544737|gb|EAY90876.1| hypothetical protein OsI_12481 [Oryza sativa Indica Group]
gi|125587792|gb|EAZ28456.1| hypothetical protein OsJ_12437 [Oryza sativa Japonica Group]
Length = 327
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/120 (60%), Positives = 89/120 (74%), Gaps = 8/120 (6%)
Query: 155 AKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQK 214
+K + KE+S D ++ DY+HVRA+RGQAT+SHSLAER+RR+KISERMK+LQ
Sbjct: 126 SKMQSKEDSSDGDGTKE-------DYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQD 178
Query: 215 LVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP-MFYDFGMDLDNTFMVRPD 273
LVPGC K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP + +D L M+ D
Sbjct: 179 LVPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPELSFDIEQILSKQMMLSQD 238
>gi|449458041|ref|XP_004146756.1| PREDICTED: transcription factor BPE-like [Cucumis sativus]
Length = 298
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Query: 153 NDAKKEEKENSPKAD-SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+++K E + S K + + Q ++P +DYIHVRARRGQATDSHSLAER RREKISERMKI
Sbjct: 140 HESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 199
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
LQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 200 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 242
>gi|357124540|ref|XP_003563957.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 441
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 3/124 (2%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKEPPKDYIHVRARRGQATDSHSLAER 199
V +K++K + D K S K++ +Q + P +DYIH+RAR GQAT+SHSLAER
Sbjct: 220 VVAKQEKDNDEKDGPKRPISASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAER 279
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD 259
VRREKISERMK LQ LVPGC KV GKA MLDEIINYVQ LQ QVEFLSMKL++VNP D
Sbjct: 280 VRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPAL-D 338
Query: 260 FGMD 263
F ++
Sbjct: 339 FNIE 342
>gi|359494803|ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
gi|296090643|emb|CBI41042.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 104/160 (65%), Gaps = 22/160 (13%)
Query: 111 TATTTRMDKKRKNRTNASSSF------NSAQSKDP-----REVKSKKQKKGNVNDAKK-- 157
T + ++KKRK + S F +AQ KD E K K ++K N+ K
Sbjct: 166 TMELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDECLGRQDERKQKAEQKIVANNCGKLI 225
Query: 158 --EEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E K +S + + P +DYIHVRA+RGQAT+SHSLAERVRRE+ISERMK LQ L
Sbjct: 226 GAEVKMSS-------QTGEAPKEDYIHVRAKRGQATNSHSLAERVRRERISERMKFLQDL 278
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
VPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA+V P
Sbjct: 279 VPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYP 318
>gi|222641764|gb|EEE69896.1| hypothetical protein OsJ_29731 [Oryza sativa Japonica Group]
Length = 809
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/78 (85%), Positives = 73/78 (93%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
++YIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 624 EEYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQ 683
Query: 238 FLQNQVEFLSMKLASVNP 255
LQ QVEFLSMKLA+VNP
Sbjct: 684 SLQRQVEFLSMKLATVNP 701
>gi|193848525|gb|ACF22714.1| putative TA1 protein [Brachypodium distachyon]
Length = 428
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 91/124 (73%), Gaps = 3/124 (2%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKEPPKDYIHVRARRGQATDSHSLAER 199
V +K++K + D K S K++ +Q + P +DYIH+RAR GQAT+SHSLAER
Sbjct: 220 VVAKQEKDNDEKDGPKRPISASRKSNGKQTEDNSDAPKEDYIHIRARSGQATNSHSLAER 279
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD 259
VRREKISERMK LQ LVPGC KV GKA MLDEIINYVQ LQ QVEFLSMKL++VNP D
Sbjct: 280 VRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPAL-D 338
Query: 260 FGMD 263
F ++
Sbjct: 339 FNIE 342
>gi|413933172|gb|AFW67723.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 284
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 104/154 (67%), Gaps = 14/154 (9%)
Query: 119 KKRKNRTNASSSFNSA---QSKDPREVKSKKQKKGNVNDA-KKEEKENSPKADSEQKVAK 174
KKRK + + + A Q+K + + ++GN + K + KE+S D ++
Sbjct: 45 KKRKGVEDCVTLLHDAGDQQTKGSPQPERNSVEEGNRKISPKMQSKEDSSDGDGTKE--- 101
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
DY+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC K+TGKA MLDEIIN
Sbjct: 102 ----DYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGKAVMLDEIIN 157
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
YVQ LQ QVEFLSMKLA+VNP + G D++
Sbjct: 158 YVQSLQRQVEFLSMKLATVNP---ELGFDIEQII 188
>gi|255558300|ref|XP_002520177.1| DNA binding protein, putative [Ricinus communis]
gi|223540669|gb|EEF42232.1| DNA binding protein, putative [Ricinus communis]
Length = 265
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPP 177
D K ++++ + N+ D + +K+ GN+++ + E P + + +PP
Sbjct: 73 DDSTKVVSSSNGNGNAVNDSDAKRLKTS----GNLDENHDSKSEAEPSSGKHVEQNTQPP 128
Query: 178 ----KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEII
Sbjct: 129 ELPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 188
Query: 234 NYVQFLQNQVEFLSMKLASVN 254
NY+Q LQ QVEFLSMKL +VN
Sbjct: 189 NYIQSLQRQVEFLSMKLEAVN 209
>gi|356509797|ref|XP_003523632.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
Length = 376
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/93 (75%), Positives = 80/93 (86%), Gaps = 2/93 (2%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
K DSE + + +++IHVRARRGQAT+SHSLAERVRREKISERM++LQ+LVPGCDK TG
Sbjct: 215 KDDSESEEGSK--ENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCDKKTG 272
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
KA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 273 KAVMLDEIINYVQSLQQQVEFLSMKLATVNPQL 305
>gi|388503848|gb|AFK39990.1| unknown [Lotus japonicus]
Length = 248
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 74/81 (91%), Gaps = 1/81 (1%)
Query: 175 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPPK DYIHVRARRGQATDSHS+AER RREKISERMKILQ LVPGC+K+ GKA +LDEII
Sbjct: 110 EPPKQDYIHVRARRGQATDSHSIAERARREKISERMKILQDLVPGCNKMIGKALVLDEII 169
Query: 234 NYVQFLQNQVEFLSMKLASVN 254
NY+Q LQ+QVEFLSMKL +VN
Sbjct: 170 NYIQSLQHQVEFLSMKLEAVN 190
>gi|351720977|ref|NP_001237962.1| uncharacterized protein LOC100306638 [Glycine max]
gi|255629145|gb|ACU14917.1| unknown [Glycine max]
Length = 240
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 100/158 (63%), Gaps = 10/158 (6%)
Query: 105 QSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNV---NDAKKEEKE 161
S +T TA T D + +S++ + + D +K+ K G ND K E E
Sbjct: 30 HSHLTATAPTKGKDSTAADEVLSSTTTANLSNND--SGSNKRMKVGGSSFENDGFKAEAE 87
Query: 162 NSPKAD---SEQ--KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLV 216
S SEQ K + P DYIHVRARRGQATDSHSLAER RREKISERMKILQ L
Sbjct: 88 ASSVGGNKSSEQSNKPCEAPKPDYIHVRARRGQATDSHSLAERARREKISERMKILQDLA 147
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
PGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 148 PGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 185
>gi|449533777|ref|XP_004173848.1| PREDICTED: transcription factor BPE-like, partial [Cucumis sativus]
Length = 174
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
Query: 153 NDAKKEEKENSPKAD-SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+++K E + S K + + Q ++P +DYIHVRARRGQATDSHSLAER RREKISERMKI
Sbjct: 16 HESKTEAEPRSGKTEQNSQPTPEQPKQDYIHVRARRGQATDSHSLAERARREKISERMKI 75
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
LQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 76 LQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 118
>gi|224134264|ref|XP_002327796.1| predicted protein [Populus trichocarpa]
gi|222836881|gb|EEE75274.1| predicted protein [Populus trichocarpa]
Length = 290
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 74/115 (64%), Positives = 88/115 (76%), Gaps = 7/115 (6%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
EV SK ++K ++ + KEN Q+ + P DYIHVRARRGQATDSHSLAER
Sbjct: 167 EVDSKVKEKSSIGISADFSKEN-------QQTSALPKTDYIHVRARRGQATDSHSLAERA 219
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
RREKIS++MK LQ LVPGC+K+TG+A MLDEIINYVQ LQ QVEFLSMKLA++NP
Sbjct: 220 RREKISKKMKSLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFLSMKLAALNP 274
>gi|413923611|gb|AFW63543.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 352
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 13/157 (8%)
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVND--AKKEEKENSPKADSEQKVAKEPPK 178
RK + +A ++ + + + ++ +++ A + K+ PKA +++K
Sbjct: 69 RKRKPDAYDGLDATGGANDMSKRPRGKRLSGISEIVAPGKGKQERPKAGTKKKAEAASAA 128
Query: 179 ----------DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA M
Sbjct: 129 AAAAAAGHKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGM 188
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMF-YDFGMDL 264
LDEIINYVQ LQ QVEFLSMK+A+ NP+ +D DL
Sbjct: 189 LDEIINYVQSLQKQVEFLSMKIAASNPVVSFDIVEDL 225
>gi|226495537|ref|NP_001141393.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194704318|gb|ACF86243.1| unknown [Zea mays]
gi|413923610|gb|AFW63542.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 342
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 13/157 (8%)
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVND--AKKEEKENSPKADSEQKVAKEPPK 178
RK + +A ++ + + + ++ +++ A + K+ PKA +++K
Sbjct: 69 RKRKPDAYDGLDATGGANDMSKRPRGKRLSGISEIVAPGKGKQERPKAGTKKKAEAASAA 128
Query: 179 ----------DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA M
Sbjct: 129 AAAAAAGHKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGM 188
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMF-YDFGMDL 264
LDEIINYVQ LQ QVEFLSMK+A+ NP+ +D DL
Sbjct: 189 LDEIINYVQSLQKQVEFLSMKIAASNPVVSFDIVEDL 225
>gi|413923609|gb|AFW63541.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 102/157 (64%), Gaps = 13/157 (8%)
Query: 121 RKNRTNASSSFNSAQSKDPREVKSKKQKKGNVND--AKKEEKENSPKADSEQKVAKEPPK 178
RK + +A ++ + + + ++ +++ A + K+ PKA +++K
Sbjct: 69 RKRKPDAYDGLDATGGANDMSKRPRGKRLSGISEIVAPGKGKQERPKAGTKKKAEAASAA 128
Query: 179 ----------DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA M
Sbjct: 129 AAAAAAGHKTDYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGM 188
Query: 229 LDEIINYVQFLQNQVEFLSMKLASVNPMF-YDFGMDL 264
LDEIINYVQ LQ QVEFLSMK+A+ NP+ +D DL
Sbjct: 189 LDEIINYVQSLQKQVEFLSMKIAASNPVVSFDIVEDL 225
>gi|242082417|ref|XP_002445977.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
gi|241942327|gb|EES15472.1| hypothetical protein SORBIDRAFT_07g028945 [Sorghum bicolor]
Length = 343
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 99/145 (68%), Gaps = 9/145 (6%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQK-----V 172
+K++++ + + Q + V S K++ +DAK KE +P A ++K
Sbjct: 108 NKRKRSNEDVLGMIGTDQDQGMPSVDSSKER--GEDDAKG--KEETPPATRKKKGKGASA 163
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A + YIHVRAR+GQAT+ HSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEI
Sbjct: 164 ADGESESYIHVRARKGQATNRHSLAERLRREKISERMKLLQDLVPGCTKVTGKAVMLDEI 223
Query: 233 INYVQFLQNQVEFLSMKLASVNPMF 257
INYVQ LQ QVEFLSMKLA+VNP
Sbjct: 224 INYVQSLQRQVEFLSMKLAAVNPQL 248
>gi|212723614|ref|NP_001131789.1| uncharacterized protein LOC100193160 [Zea mays]
gi|194692538|gb|ACF80353.1| unknown [Zea mays]
gi|414872589|tpg|DAA51146.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 86/113 (76%), Gaps = 10/113 (8%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
K + KE+S D ++ DY+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ L
Sbjct: 118 KIQSKEDSSDGDGTKE-------DYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 170
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
VPGC K+TGKA MLDEIINYVQ LQ QVEFLSMKL++VNP + G D++
Sbjct: 171 VPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP---ELGFDIEQII 220
>gi|326521466|dbj|BAK00309.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 440
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 3/124 (2%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE--PPKDYIHVRARRGQATDSHSLAER 199
+ +K++K D K S K++ +Q K P +DYIH+RAR GQAT+SHSLAER
Sbjct: 222 LAAKQEKDDGDKDEPKRPIVTSRKSNGKQTEDKSDAPKEDYIHIRARSGQATNSHSLAER 281
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD 259
VRREKISERMK LQ LVPGC KV GKA MLDEIINYVQ LQ QVEFLSMKL++VNP D
Sbjct: 282 VRREKISERMKFLQDLVPGCSKVIGKAVMLDEIINYVQSLQRQVEFLSMKLSAVNPAL-D 340
Query: 260 FGMD 263
F ++
Sbjct: 341 FNIE 344
>gi|18398703|ref|NP_565434.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|15724318|gb|AAL06552.1|AF412099_1 At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|18700242|gb|AAL77731.1| At2g18300/T30D6.19 [Arabidopsis thaliana]
gi|20197806|gb|AAD15506.2| expressed protein [Arabidopsis thaliana]
gi|330251658|gb|AEC06752.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 335
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K GN + KE S A QK+ DYIHVRARRGQATD HSLAER RREKI
Sbjct: 154 KSNMGNTEASSDTSKETSKGASENQKL------DYIHVRARRGQATDRHSLAERARREKI 207
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
S++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 208 SKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>gi|30680338|ref|NP_849976.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|218563534|sp|Q9ZPW3.3|BH064_ARATH RecName: Full=Transcription factor bHLH64; AltName: Full=Basic
helix-loop-helix protein 64; Short=AtbHLH64; Short=bHLH
64; AltName: Full=Transcription factor EN 79; AltName:
Full=bHLH transcription factor bHLH064
gi|330251659|gb|AEC06753.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 337
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K GN + KE S A QK+ DYIHVRARRGQATD HSLAER RREKI
Sbjct: 154 KSNMGNTEASSDTSKETSKGASENQKL------DYIHVRARRGQATDRHSLAERARREKI 207
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
S++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 208 SKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>gi|334184293|ref|NP_001189548.1| transcription factor bHLH64 [Arabidopsis thaliana]
gi|330251660|gb|AEC06754.1| transcription factor bHLH64 [Arabidopsis thaliana]
Length = 364
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K GN + KE S A QK+ DYIHVRARRGQATD HSLAER RREKI
Sbjct: 154 KSNMGNTEASSDTSKETSKGASENQKL------DYIHVRARRGQATDRHSLAERARREKI 207
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
S++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 208 SKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>gi|30690689|ref|NP_849508.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|332661270|gb|AEE86670.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 302
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 115/196 (58%), Gaps = 6/196 (3%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 80 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 138
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD--NTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQ 298
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLDY 258
Query: 299 LTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 259 SVINSDHTTSLGAKDH 274
>gi|242062782|ref|XP_002452680.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
gi|241932511|gb|EES05656.1| hypothetical protein SORBIDRAFT_04g030530 [Sorghum bicolor]
Length = 359
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 69/87 (79%), Positives = 76/87 (87%), Gaps = 1/87 (1%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA MLDEIINYVQ
Sbjct: 149 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 208
Query: 239 LQNQVEFLSMKLASVNPMF-YDFGMDL 264
LQ QVEFLSMK+A+ NP+ +D DL
Sbjct: 209 LQKQVEFLSMKIAASNPVVSFDIVEDL 235
>gi|414872588|tpg|DAA51145.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 209
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 86/113 (76%), Gaps = 10/113 (8%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
K + KE+S D ++ DY+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ L
Sbjct: 11 KIQSKEDSSDGDGTKE-------DYVHIRAKRGQATNSHSLAERLRRKKISERMKLLQDL 63
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
VPGC K+TGKA MLDEIINYVQ LQ QVEFLSMKL++VNP + G D++
Sbjct: 64 VPGCSKITGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNP---ELGFDIEQII 113
>gi|224107851|ref|XP_002314625.1| predicted protein [Populus trichocarpa]
gi|222863665|gb|EEF00796.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 78/128 (60%), Positives = 85/128 (66%), Gaps = 15/128 (11%)
Query: 155 AKKEEKENSPKADSEQKVAKEPP----KDYIHVRARRGQATDSHSLAERVRREKISERMK 210
+K E E S E K +PP +DYIHVRARRGQATDSHSLAER RREKISERMK
Sbjct: 44 VRKHEAEPSSGKHVEHKT--QPPEPSKQDYIHVRARRGQATDSHSLAERARREKISERMK 101
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF---------YDFG 261
ILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN DFG
Sbjct: 102 ILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVNTRMNPGIEVFASKDFG 161
Query: 262 MDLDNTFM 269
D M
Sbjct: 162 QTFDTAGM 169
>gi|20127068|gb|AAM10953.1|AF488597_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 320
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K GN + KE S A QK+ DYIHVRARRGQATD HSLAER RREKI
Sbjct: 137 KSNMGNTEASSDTSKETSKGASENQKL------DYIHVRARRGQATDRHSLAERARREKI 190
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
S++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 191 SKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 240
>gi|15241896|ref|NP_201067.1| transcription factor bHLH79 [Arabidopsis thaliana]
gi|75311612|sp|Q9LV17.1|BH079_ARATH RecName: Full=Transcription factor bHLH79; AltName: Full=Basic
helix-loop-helix protein 79; Short=AtbHLH79; Short=bHLH
79; AltName: Full=Transcription factor EN 81; AltName:
Full=bHLH transcription factor bHLH079
gi|8809657|dbj|BAA97208.1| unnamed protein product [Arabidopsis thaliana]
gi|18175779|gb|AAL59926.1| unknown protein [Arabidopsis thaliana]
gi|21536811|gb|AAM61143.1| unknown [Arabidopsis thaliana]
gi|21689825|gb|AAM67556.1| unknown protein [Arabidopsis thaliana]
gi|332010247|gb|AED97630.1| transcription factor bHLH79 [Arabidopsis thaliana]
Length = 281
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
+EQK EPPKDYIHVRARRGQATD HSLAER RREKISE+M LQ ++PGC+K+ GKA
Sbjct: 138 TEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKAL 197
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVN 254
+LDEIINY+Q LQ QVEFLSMKL VN
Sbjct: 198 VLDEIINYIQSLQRQVEFLSMKLEVVN 224
>gi|297797231|ref|XP_002866500.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312335|gb|EFH42759.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 282
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/87 (74%), Positives = 73/87 (83%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
+EQK EPPKDYIHVRARRGQATD HSLAER RREKISE+M LQ ++PGC+K+ GKA
Sbjct: 139 TEQKNKPEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKAL 198
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVN 254
+LDEIINY+Q LQ QVEFLSMKL VN
Sbjct: 199 VLDEIINYIQSLQRQVEFLSMKLEVVN 225
>gi|357486401|ref|XP_003613488.1| BHLH transcription factor [Medicago truncatula]
gi|355514823|gb|AES96446.1| BHLH transcription factor [Medicago truncatula]
Length = 239
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/130 (59%), Positives = 87/130 (66%), Gaps = 4/130 (3%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVR 184
TN + NS D + + GN K E+ +S K E P KDYIHVR
Sbjct: 58 TNGGARGNSNAVNDDGGDGKRSKTSGN----SKGEENSSGKHAEETSDEPHPKKDYIHVR 113
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQATDSHSLAER RREKISERMK LQ LVPGC+KV GKA +LDEIINY+Q L +QVE
Sbjct: 114 ARRGQATDSHSLAERARREKISERMKTLQDLVPGCNKVIGKALVLDEIINYIQSLHHQVE 173
Query: 245 FLSMKLASVN 254
FLSMKL +VN
Sbjct: 174 FLSMKLEAVN 183
>gi|224133354|ref|XP_002321546.1| predicted protein [Populus trichocarpa]
gi|222868542|gb|EEF05673.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/81 (82%), Positives = 72/81 (88%), Gaps = 1/81 (1%)
Query: 175 EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
EPPK DYIHVRARRGQATDSHSLAER RREKISERM +LQ LVPGC+KV GKA +LDEII
Sbjct: 75 EPPKQDYIHVRARRGQATDSHSLAERARREKISERMNMLQDLVPGCNKVIGKALVLDEII 134
Query: 234 NYVQFLQNQVEFLSMKLASVN 254
NY+Q LQ QVEFLSMKL +VN
Sbjct: 135 NYIQSLQCQVEFLSMKLEAVN 155
>gi|4006909|emb|CAB16839.1| putative protein [Arabidopsis thaliana]
gi|7270602|emb|CAB80320.1| putative protein [Arabidopsis thaliana]
Length = 300
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 76 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 134
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 135 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 194
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 195 QQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSL 254
Query: 297 AQLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 255 DYSVINSDHTTSLGAKDH 272
>gi|168000495|ref|XP_001752951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695650|gb|EDQ81992.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 119
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/80 (83%), Positives = 71/80 (88%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
P + YIHVRARRGQATDSHSLAERVRREKISERMK LQ LVP C KVTGKA MLDEIINY
Sbjct: 18 PKQHYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPSCSKVTGKAVMLDEIINY 77
Query: 236 VQFLQNQVEFLSMKLASVNP 255
VQ LQ Q+EFLSMKLA+V+P
Sbjct: 78 VQSLQRQIEFLSMKLAAVDP 97
>gi|255648089|gb|ACU24499.1| unknown [Glycine max]
Length = 229
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 84/108 (77%), Gaps = 2/108 (1%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPK-DYIHVRARRGQATDSHSLAERVRREKIS 206
K G V DA P+ ++ +++PPK DYIHVRARRGQATDSHSLAER RREKIS
Sbjct: 65 KAGEV-DATSVAGNKLPEQTAKPSSSEQPPKQDYIHVRARRGQATDSHSLAERARREKIS 123
Query: 207 ERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
ERMKILQ +VPGC+KV GKA +LDEIINY+Q LQ+QVEFL MKL +VN
Sbjct: 124 ERMKILQDIVPGCNKVIGKALVLDEIINYIQSLQHQVEFLFMKLEAVN 171
>gi|255543172|ref|XP_002512649.1| conserved hypothetical protein [Ricinus communis]
gi|223548610|gb|EEF50101.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 103/159 (64%), Gaps = 15/159 (9%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPP-KDYIHVRARRGQATDSHSLAERVRREKISERM 209
N + K E K P+A E+KVAKE P Y+HVRARRG+ATD HSLAERVRR+KIS RM
Sbjct: 131 NCDFGKPERKRPEPRARKEKKVAKEHPLTGYVHVRARRGEATDPHSLAERVRRKKISVRM 190
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFM 269
K+LQ LVPGCDK+TGKA +LDEII +V LQNQVEFL+ K S N + + +
Sbjct: 191 KLLQSLVPGCDKLTGKAQILDEIIRHVLSLQNQVEFLAAKFTSENGIANEVNYE------ 244
Query: 270 VRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADTTTA 308
+N+++A ++Q S +AQL +F + T+A
Sbjct: 245 --------MNTLVAKELYNSELQESSSAQLISFMEATSA 275
>gi|312283223|dbj|BAJ34477.1| unnamed protein product [Thellungiella halophila]
Length = 342
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/110 (67%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K GN + KE S A QK+ DYIHVRARRGQATD HSLAER RREKI
Sbjct: 156 KSNMGNTEASSDTSKEISKGASESQKL------DYIHVRARRGQATDRHSLAERARREKI 209
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
S++MK LQ LVPGC+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 210 SKKMKYLQDLVPGCNKVTGKAGMLDEIINYVQSLQRQVEFLSMKLAVLNP 259
>gi|297836564|ref|XP_002886164.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332004|gb|EFH62423.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/96 (73%), Positives = 77/96 (80%), Gaps = 6/96 (6%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
KE S KA QK+ DYIHVRARRGQATD HSLAER RREKIS++MK LQ +VPGC
Sbjct: 168 KETSKKASEIQKL------DYIHVRARRGQATDRHSLAERARREKISKKMKYLQDIVPGC 221
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
+KVTGKA MLDEIINYVQ LQ QVEFLSMKLA +NP
Sbjct: 222 NKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLNP 257
>gi|15234436|ref|NP_195372.1| transcription factor BEE 2 [Arabidopsis thaliana]
gi|75305715|sp|Q93VJ4.1|BEE2_ARATH RecName: Full=Transcription factor BEE 2; AltName: Full=Basic
helix-loop-helix protein 58; Short=AtbHLH58; Short=bHLH
58; AltName: Full=Protein Brassinosteroid enhanced
expression 2; AltName: Full=Transcription factor EN 80;
AltName: Full=bHLH transcription factor bHLH058
gi|13877937|gb|AAK44046.1|AF370231_1 unknown protein [Arabidopsis thaliana]
gi|16323468|gb|AAL15228.1| unknown protein [Arabidopsis thaliana]
gi|332661269|gb|AEE86669.1| transcription factor BEE 2 [Arabidopsis thaliana]
Length = 304
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 80 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 138
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSL 258
Query: 297 AQLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 259 DYSVINSDHTTSLGAKDH 276
>gi|34391435|gb|AAN18284.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 288
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 64 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 122
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 123 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 182
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 183 QQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSL 242
Query: 297 AQLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 243 DYSVINSDHTTSLGAKDH 260
>gi|15451016|gb|AAK96779.1| Unknown protein [Arabidopsis thaliana]
gi|23198360|gb|AAN15707.1| Unknown protein [Arabidopsis thaliana]
Length = 304
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 80 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 138
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSL 258
Query: 297 AQLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 259 DYSVINSDHTTSLGAKDH 276
>gi|20127056|gb|AAM10947.1|AF488591_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 304
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 115/198 (58%), Gaps = 8/198 (4%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE---KENSPKADSEQKVAKEPPKDY 180
+ N S + Q+K E K++K++K + + E K S +++E + P DY
Sbjct: 80 KYNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKP-DY 138
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 139 IHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQ 198
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPT 296
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 199 QQVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSL 258
Query: 297 AQLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 259 DYSVINSDHTTSLGAKDH 276
>gi|295913405|gb|ADG57955.1| transcription factor [Lycoris longituba]
Length = 186
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/89 (76%), Positives = 75/89 (84%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + + P +DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GK
Sbjct: 42 ADQNTQPLEAPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGK 101
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVN 254
A +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 102 ASVLDEIINYIQALQRQVEFLSMKLEAVN 130
>gi|224094803|ref|XP_002310242.1| predicted protein [Populus trichocarpa]
gi|222853145|gb|EEE90692.1| predicted protein [Populus trichocarpa]
Length = 108
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 5/106 (4%)
Query: 154 DAKKEEKENSPK--ADSE---QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
D K +++ SP+ ADS QK + P DYIHVRARRGQATDSHSLAER RREKIS++
Sbjct: 3 DEPKVKEKGSPEISADSSKENQKTSALPKTDYIHVRARRGQATDSHSLAERARREKISKK 62
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
MK LQ LVPGC+K+TG+A MLDEIINYVQ LQ QVEF+SMKLA+VN
Sbjct: 63 MKCLQDLVPGCNKITGRAGMLDEIINYVQSLQRQVEFISMKLAAVN 108
>gi|21537215|gb|AAM61556.1| unknown [Arabidopsis thaliana]
Length = 288
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/197 (45%), Positives = 115/197 (58%), Gaps = 6/197 (3%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD-SEQKVAKEPPK-DYI 181
+ N S + Q+K E K++K++K + + E K++ S + + E K DYI
Sbjct: 64 KNNGHSRAITLQNKRKPEGKTEKREKKKIKAEDETEPSMKGKSNMSNXETSSEIQKPDYI 123
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ
Sbjct: 124 HVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQ 183
Query: 242 QVEFLSMKLASVNPMFYDFGMDLD----NTFMVRPDDQQNLNSIIAASASAPQVQCSPTA 297
QVEFLSMKL+ +NP DL + P + + SI+A S P Q
Sbjct: 184 QVEFLSMKLSVINPELECHIDDLSAKQFQAYFTGPPEGDSKQSIMADFRSFPLHQQGSLD 243
Query: 298 QLTAFADTTTAFAPADH 314
+D TT+ DH
Sbjct: 244 YSVINSDHTTSLGAKDH 260
>gi|219362473|ref|NP_001136461.1| uncharacterized protein LOC100216572 [Zea mays]
gi|194695798|gb|ACF81983.1| unknown [Zea mays]
Length = 366
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/78 (84%), Positives = 72/78 (92%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA MLDEIINYVQ
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 239 LQNQVEFLSMKLASVNPM 256
LQ QVEFLSMK+A+ NP+
Sbjct: 202 LQKQVEFLSMKIAASNPV 219
>gi|115456009|ref|NP_001051605.1| Os03g0802900 [Oryza sativa Japonica Group]
gi|29150361|gb|AAO72370.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108711612|gb|ABF99407.1| bHLH transcription factor, putative, expressed [Oryza sativa
Japonica Group]
gi|113550076|dbj|BAF13519.1| Os03g0802900 [Oryza sativa Japonica Group]
Length = 265
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%), Gaps = 9/99 (9%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q
Sbjct: 131 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 190
Query: 238 FLQNQVEFLSMKLASVNPMF---------YDFGMDLDNT 267
LQ QVEFLSMKL +VN DFG + NT
Sbjct: 191 ALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNT 229
>gi|323388909|gb|ADX60259.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 265
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%), Gaps = 9/99 (9%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q
Sbjct: 131 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 190
Query: 238 FLQNQVEFLSMKLASVNPMF---------YDFGMDLDNT 267
LQ QVEFLSMKL +VN DFG + NT
Sbjct: 191 ALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNT 229
>gi|125546085|gb|EAY92224.1| hypothetical protein OsI_13945 [Oryza sativa Indica Group]
Length = 263
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/99 (70%), Positives = 76/99 (76%), Gaps = 9/99 (9%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q
Sbjct: 129 QDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQ 188
Query: 238 FLQNQVEFLSMKLASVNPMF---------YDFGMDLDNT 267
LQ QVEFLSMKL +VN DFG + NT
Sbjct: 189 ALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQVYNT 227
>gi|108864345|gb|ABA93365.2| expressed protein [Oryza sativa Japonica Group]
Length = 508
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 116/228 (50%), Gaps = 64/228 (28%)
Query: 107 TVTTTATTTRM----DKKRKNRTNASSSFNSAQSKDPREVKSKKQK----KGNVNDAKKE 158
TT A R+ + + RT+ + N QS +P K+KK K D K
Sbjct: 192 AATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEP-GTKAKKCKLSADAAGDEDTKPV 250
Query: 159 EKENSPKADSEQKV---AKEPPKDYIHVRARRGQATDSHSLAER---------------- 199
+ + + KV A EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 251 AGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFS 310
Query: 200 ----------------VRREKISERMKILQKLVPGCDK--------------VTGKAFML 229
VRREKISERMK+LQ LVPGC+K VTGKA ML
Sbjct: 311 SILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVML 370
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQN 277
DEIINYVQ LQ QVEFLSMKL++VNP DF D+DN P DQ +
Sbjct: 371 DEIINYVQSLQRQVEFLSMKLSTVNPQL-DF--DVDNFI---PKDQAS 412
>gi|125588289|gb|EAZ28953.1| hypothetical protein OsJ_12999 [Oryza sativa Japonica Group]
Length = 224
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 85/123 (69%), Gaps = 9/123 (7%)
Query: 154 DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ 213
+A+ + + S D + P +DYIHVRARRGQATDSHSLAER RREKISERMKILQ
Sbjct: 66 EAETDSRNASKSGDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQ 125
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF---------YDFGMDL 264
LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN DFG +
Sbjct: 126 DLVPGCNKVIGKASVLDEIINYIQALQRQVEFLSMKLEAVNAHVNNGIEAFPPKDFGAQV 185
Query: 265 DNT 267
NT
Sbjct: 186 YNT 188
>gi|50509096|dbj|BAD30156.1| putative bHLH protein [Oryza sativa Japonica Group]
Length = 268
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 98/154 (63%), Gaps = 8/154 (5%)
Query: 125 TNASSSFNSAQSKD---PREVKSKKQKKGNVNDAKKEE----KENSPKADSEQKVAKEPP 177
T+A+S +D P + K K + ND+ + E NS KA + EPP
Sbjct: 62 TSAASGGGGGGGQDSDAPEAKRLKPMKSSDKNDSLRTEAGTDSGNSSKAADKNATPPEPP 121
Query: 178 K-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
K DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+
Sbjct: 122 KQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYI 181
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMV 270
Q LQ+QVEF+ L + F ++ N+ M+
Sbjct: 182 QSLQHQVEFMFKYLIELFLQFLSMKLEAVNSHMI 215
>gi|102139897|gb|ABF70046.1| basic helix-loop-helix (bHLH) family protein [Musa acuminata]
Length = 278
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 86/118 (72%), Gaps = 2/118 (1%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPK--DYIHVRARRGQATDSHSLAERV 200
KSK++ + + + + + + + ++ + PK DYIHVRARRGQATDSHSLAERV
Sbjct: 90 KSKQESRSSGAEEEGTARGGATSKNKKKASGSDAPKETDYIHVRARRGQATDSHSLAERV 149
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
RRE+ISERMK LQ+LVPGC K+ GKA LDEIINYVQ LQ QVEFLSMKLA+ P +
Sbjct: 150 RRERISERMKYLQELVPGCSKIMGKASTLDEIINYVQSLQRQVEFLSMKLAAAEPRMH 207
>gi|388498252|gb|AFK37192.1| unknown [Lotus japonicus]
Length = 220
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 98/148 (66%), Gaps = 11/148 (7%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSE 169
TT++T ++++N SSS +S +K VK + D+ E K K
Sbjct: 29 TTSSTLLPPRRKRNLPPFSSSNDSCGNK---HVK--------LGDSVDELKGEPEKQPPS 77
Query: 170 QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
P +DYIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +L
Sbjct: 78 PPPPPPPKQDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVL 137
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMF 257
DEIINY+Q LQ+QVEFLSMKL +VN F
Sbjct: 138 DEIINYIQSLQHQVEFLSMKLEAVNSRF 165
>gi|62701739|gb|AAX92812.1| expressed protein [Oryza sativa Japonica Group]
Length = 507
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 112/217 (51%), Gaps = 61/217 (28%)
Query: 107 TVTTTATTTRM----DKKRKNRTNASSSFNSAQSKDPREVKSKKQK----KGNVNDAKKE 158
TT A R+ + + RT+ + N QS +P K+KK K D K
Sbjct: 192 AATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEP-GTKAKKCKLSADAAGDEDTKPV 250
Query: 159 EKENSPKADSEQKV---AKEPPKDYIHVRARRGQATDSHSLAER---------------- 199
+ + + KV A EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 251 AGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFS 310
Query: 200 ----------------VRREKISERMKILQKLVPGCDK--------------VTGKAFML 229
VRREKISERMK+LQ LVPGC+K VTGKA ML
Sbjct: 311 SILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVML 370
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
DEIINYVQ LQ QVEFLSMKL++VNP DF D+DN
Sbjct: 371 DEIINYVQSLQRQVEFLSMKLSTVNPQL-DF--DVDN 404
>gi|224100187|ref|XP_002311780.1| predicted protein [Populus trichocarpa]
gi|222851600|gb|EEE89147.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/76 (85%), Positives = 70/76 (92%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAER RREKISERMKILQ +VPGC+KVTGKA +LDEIINY+Q
Sbjct: 137 DYIHVRARRGQATDSHSLAERARREKISERMKILQDIVPGCNKVTGKALVLDEIINYIQS 196
Query: 239 LQNQVEFLSMKLASVN 254
LQ QVEFLSMKL +VN
Sbjct: 197 LQRQVEFLSMKLEAVN 212
>gi|224119176|ref|XP_002318005.1| predicted protein [Populus trichocarpa]
gi|222858678|gb|EEE96225.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 4/106 (3%)
Query: 153 NDAKKE----EKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISER 208
ND++ E N+ A+ K ++ P +DYIHVR+RRGQATDSHSLAER RRE+I ER
Sbjct: 109 NDSRAEIEASSAANNKPAEPSSKPSEPPMQDYIHVRSRRGQATDSHSLAERARRERIGER 168
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
MKILQ LVPGC+KV GKA LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 169 MKILQDLVPGCNKVIGKALALDEIINYIQSLQCQVEFLSMKLEAVN 214
>gi|363808192|ref|NP_001242485.1| uncharacterized protein LOC100809878 [Glycine max]
gi|255644791|gb|ACU22897.1| unknown [Glycine max]
Length = 224
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 68/94 (72%), Positives = 78/94 (82%), Gaps = 3/94 (3%)
Query: 161 ENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD 220
+ +PK S ++ P +DYIHVRARRGQATD+HSLAER RREKISERMKILQ LVPGC+
Sbjct: 80 QQTPKPSSSEQA---PKQDYIHVRARRGQATDNHSLAERARREKISERMKILQDLVPGCN 136
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
KV GKAF+LD IINYVQ LQ QVEFLSMKL +V+
Sbjct: 137 KVIGKAFVLDGIINYVQSLQRQVEFLSMKLEAVS 170
>gi|414865634|tpg|DAA44191.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 262
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 81 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 140
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
A MLDEIINYVQ LQ Q+EFLSMKL+++ P DLD
Sbjct: 141 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP---GLNCDLD 177
>gi|414865637|tpg|DAA44194.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 289
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 107 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 166
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
A MLDEIINYVQ LQ Q+EFLSMKL+++ P DLD
Sbjct: 167 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP---GLNCDLD 203
>gi|414865635|tpg|DAA44192.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 185
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 77/90 (85%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 81 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 140
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
A MLDEIINYVQ LQ Q+EFLSMKL+++ P
Sbjct: 141 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP 170
>gi|413920794|gb|AFW60726.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 328
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 92/148 (62%), Gaps = 8/148 (5%)
Query: 110 TTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVND---AKKEEKENSPKA 166
+ T+++ K ++ T A +S++ E ++KK K + A E S K
Sbjct: 185 ASGTSSKQSKAKEAVTTAPP-----ESRETAETRAKKCKLSTDEERKPAAGEGWRGSGKG 239
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
EPPKDYIHVRARRGQATDSHSLAERVRREKI ERMK+LQ LVPGC KVTGKA
Sbjct: 240 KELVAADAEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCSKVTGKA 299
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVN 254
MLDEIINYVQ LQ QVE + L +
Sbjct: 300 VMLDEIINYVQSLQRQVEVRRVCLLCIG 327
>gi|223945659|gb|ACN26913.1| unknown [Zea mays]
Length = 267
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 107 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 166
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
A MLDEIINYVQ LQ Q+EFLSMKL+++ P DLD
Sbjct: 167 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP---GLNCDLD 203
>gi|293333598|ref|NP_001167725.1| uncharacterized protein LOC100381413 [Zea mays]
gi|223943625|gb|ACN25896.1| unknown [Zea mays]
gi|414865638|tpg|DAA44195.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 211
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 77/90 (85%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 107 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 166
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
A MLDEIINYVQ LQ Q+EFLSMKL+++ P
Sbjct: 167 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP 196
>gi|125526612|gb|EAY74726.1| hypothetical protein OsI_02617 [Oryza sativa Indica Group]
Length = 386
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 112/215 (52%), Gaps = 61/215 (28%)
Query: 109 TTTATTTRM----DKKRKNRTNASSSFNSAQSKDPREVKSKKQK----KGNVNDAKKEEK 160
TT A R+ + + RT+ + N QS +P K+KK K D K
Sbjct: 73 TTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEP-GTKAKKCKLSADAAGDEDTKPVAG 131
Query: 161 ENSPKADSEQKV---AKEPPKDYIHVRARRGQATDSHSLAER------------------ 199
+ + + KV A EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 132 DAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFSSI 191
Query: 200 --------------VRREKISERMKILQKLVPGCDK--------------VTGKAFMLDE 231
VRREKISERMK+LQ LVPGC+K VTGKA MLDE
Sbjct: 192 LAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVAKFSQKINLNFTLVTGKAVMLDE 251
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
IINYVQ LQ QVEFLSMKL++VNP DF D+DN
Sbjct: 252 IINYVQSLQRQVEFLSMKLSTVNPQL-DF--DVDN 283
>gi|357115005|ref|XP_003559284.1| PREDICTED: transcription factor bHLH79-like [Brachypodium
distachyon]
Length = 243
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 79/101 (78%)
Query: 154 DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ 213
DA+ + + S D + P +DYIHVRARRGQATDSHSLAER RREKI+ERMKILQ
Sbjct: 85 DAEGDSRNGSKVVDQNPPPPEPPKQDYIHVRARRGQATDSHSLAERARREKITERMKILQ 144
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
LVPGC+KV GKA +LDEIINYVQ L+ QVEFLSMKL +VN
Sbjct: 145 DLVPGCNKVIGKASVLDEIINYVQALERQVEFLSMKLEAVN 185
>gi|414591902|tpg|DAA42473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 251
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/122 (63%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Query: 136 SKDPREVKSKKQKKGNVNDAKKEEKENS---PKADSEQKVAKEPPKDYIHVRARRGQATD 192
S DP + K+ ND + E + NS K+ ++ KEPPKDYIHVRARRGQATD
Sbjct: 73 SADPEAKRLKQIAPSEKNDRRTEAETNSGNASKSADKKPAPKEPPKDYIHVRARRGQATD 132
Query: 193 SHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
SHSLAER RREKISERMK+LQ +VPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +
Sbjct: 133 SHSLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLEA 192
Query: 253 VN 254
+N
Sbjct: 193 IN 194
>gi|449437607|ref|XP_004136583.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
gi|449501894|ref|XP_004161487.1| PREDICTED: transcription factor bHLH60-like [Cucumis sativus]
Length = 369
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/198 (43%), Positives = 120/198 (60%), Gaps = 21/198 (10%)
Query: 77 NCNE--PSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSA 134
NCN P+N+ + + + ++ T S+V ++ K + T+ S+ N
Sbjct: 93 NCNLTFPTNSGLIERVTKLSVLAKEHSPETTSSVPLNSSVNLEKVKNEPTTDTDSNPNPL 152
Query: 135 QS--KDP-------REVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRA 185
Q+ DP R K K+++K KK + E++ A+ K P Y+HVRA
Sbjct: 153 QTLISDPTVENTNQRSAKRKEREKKGRGSTKKSKNESNEDAE------KLP---YVHVRA 203
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LDEIIN+VQ LQ QVEF
Sbjct: 204 RRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEF 263
Query: 246 LSMKLASVNPMFYDFGMD 263
LSM+LA+VNP DF ++
Sbjct: 264 LSMRLAAVNPRV-DFNIE 280
>gi|357516593|ref|XP_003628585.1| Transcription factor bHLH79 [Medicago truncatula]
gi|355522607|gb|AET03061.1| Transcription factor bHLH79 [Medicago truncatula]
Length = 278
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q L
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 240 QNQVEFLSMKLASVN 254
Q QVEFLSMKL +VN
Sbjct: 208 QRQVEFLSMKLEAVN 222
>gi|242041659|ref|XP_002468224.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
gi|241922078|gb|EER95222.1| hypothetical protein SORBIDRAFT_01g042070 [Sorghum bicolor]
Length = 291
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 81/100 (81%), Gaps = 3/100 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 106 ADEKPGDAGAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 165
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
A MLDEIINYVQ LQ QVEFLSMKL++++P + DLD
Sbjct: 166 AMMLDEIINYVQSLQRQVEFLSMKLSAISP---ELNCDLD 202
>gi|414865636|tpg|DAA44193.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 275
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 80/100 (80%), Gaps = 3/100 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGK
Sbjct: 111 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGK 170
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
A MLDEIINYVQ LQ Q+EFLSMKL+++ P DLD
Sbjct: 171 AMMLDEIINYVQSLQRQIEFLSMKLSAIGP---GLNCDLD 207
>gi|224137946|ref|XP_002322691.1| predicted protein [Populus trichocarpa]
gi|222867321|gb|EEF04452.1| predicted protein [Populus trichocarpa]
Length = 291
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/96 (68%), Positives = 81/96 (84%), Gaps = 4/96 (4%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
S+Q+ K P Y+HVRARRGQATDSHSLAER RREKI++RMK+LQ+LVPGC+K++G A
Sbjct: 170 SQQEEEKLP---YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTAL 226
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+LDEIIN+VQFLQ QVE LSM+LA+VNP DF +D
Sbjct: 227 VLDEIINHVQFLQRQVEILSMRLAAVNPRI-DFNLD 261
>gi|358347900|ref|XP_003637988.1| Transcription factor BPE [Medicago truncatula]
gi|355503923|gb|AES85126.1| Transcription factor BPE [Medicago truncatula]
Length = 249
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/75 (85%), Positives = 68/75 (90%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRGQATDSHSLAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q L
Sbjct: 148 YIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 240 QNQVEFLSMKLASVN 254
Q QVEFLSMKL +VN
Sbjct: 208 QRQVEFLSMKLEAVN 222
>gi|218192387|gb|EEC74814.1| hypothetical protein OsI_10634 [Oryza sativa Indica Group]
gi|222624516|gb|EEE58648.1| hypothetical protein OsJ_10029 [Oryza sativa Japonica Group]
Length = 307
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 91/130 (70%), Gaps = 10/130 (7%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-------YIHVRARRGQATDSHS 195
K K +G+ + +EE P+ + + A E D Y+HVRA+RGQAT+SHS
Sbjct: 78 KRKGSGEGSSSLHSQEETGEMPQRELSMEHAGEKAGDADASREEYVHVRAKRGQATNSHS 137
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAER RREKI+ERMK+LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKL++++P
Sbjct: 138 LAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSTISP 197
Query: 256 MFYDFGMDLD 265
+ DLD
Sbjct: 198 ---ELNSDLD 204
>gi|115477012|ref|NP_001062102.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|42408258|dbj|BAD09414.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113624071|dbj|BAF24016.1| Os08g0487700 [Oryza sativa Japonica Group]
gi|125561978|gb|EAZ07426.1| hypothetical protein OsI_29678 [Oryza sativa Indica Group]
gi|125603820|gb|EAZ43145.1| hypothetical protein OsJ_27735 [Oryza sativa Japonica Group]
Length = 365
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 67/93 (72%), Positives = 77/93 (82%), Gaps = 5/93 (5%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+ Y HVRAR+GQAT++HSLAER+RREKISERMK+LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 171 EGYSHVRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQ 230
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMV 270
LQ QVEFLSMKL++VNP +DLD +V
Sbjct: 231 SLQRQVEFLSMKLSAVNPR-----IDLDIESLV 258
>gi|297802298|ref|XP_002869033.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314869|gb|EFH45292.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 304
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 6/127 (4%)
Query: 133 SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD---SEQKVAKEPPK-DYIHVRARRG 188
S Q+K E K++K++K + ++E E+S K S + + E K DYIHVRARRG
Sbjct: 89 SLQNKRKPEGKTEKREKKKIK--AEDETESSMKGKTNMSNTETSSEIQKPDYIHVRARRG 146
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+ATD HSLAER RREKIS++MK LQ +VPGC+KVTGKA MLDEIINYVQ LQ QVEFLSM
Sbjct: 147 EATDRHSLAERARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSM 206
Query: 249 KLASVNP 255
KL+ +NP
Sbjct: 207 KLSVINP 213
>gi|242047764|ref|XP_002461628.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
gi|241925005|gb|EER98149.1| hypothetical protein SORBIDRAFT_02g005713 [Sorghum bicolor]
Length = 178
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/120 (63%), Positives = 89/120 (74%), Gaps = 3/120 (2%)
Query: 138 DPREVKSKKQKKGNVNDAKKEEKENS---PKADSEQKVAKEPPKDYIHVRARRGQATDSH 194
DP + K+ ND + E NS K+ ++ KEPPKDYIHVRARRGQATDSH
Sbjct: 2 DPEAKRLKQMTPSENNDRRTEAGSNSGNASKSADKKPAPKEPPKDYIHVRARRGQATDSH 61
Query: 195 SLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
SLAER RREKISERMK+LQ +VPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL ++N
Sbjct: 62 SLAERARREKISERMKVLQDIVPGCNKVIGKASVLDEIINYIQSLQRQVEFLSMKLETIN 121
>gi|27311243|gb|AAO00689.1| Hypothetical protein [Oryza sativa Japonica Group]
Length = 776
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 99/146 (67%), Gaps = 19/146 (13%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
KRK SSS +S + E Q++ ++ A E + AD+ ++ +
Sbjct: 581 KRKGSGEGSSSLHSQE-----ETGEMPQRELSMEHAG----EKAGDADASRE-------E 624
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGKA MLDEIINYVQ L
Sbjct: 625 YVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSL 684
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLD 265
Q QVEFLSMKL++++P + DLD
Sbjct: 685 QRQVEFLSMKLSTISP---ELNSDLD 707
>gi|108707005|gb|ABF94800.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 809
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 99/146 (67%), Gaps = 19/146 (13%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
KRK SSS +S + E Q++ ++ A E + AD+ ++ +
Sbjct: 581 KRKGSGEGSSSLHSQE-----ETGEMPQRELSMEHAG----EKAGDADASRE-------E 624
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGKA MLDEIINYVQ L
Sbjct: 625 YVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSL 684
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLD 265
Q QVEFLSMKL++++P + DLD
Sbjct: 685 QRQVEFLSMKLSTISP---ELNSDLD 707
>gi|108707003|gb|ABF94798.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 810
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 99/146 (67%), Gaps = 19/146 (13%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD 179
KRK SSS +S + E Q++ ++ A E + AD+ ++ +
Sbjct: 581 KRKGSGEGSSSLHSQE-----ETGEMPQRELSMEHAG----EKAGDADASRE-------E 624
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K+TGKA MLDEIINYVQ L
Sbjct: 625 YVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSL 684
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLD 265
Q QVEFLSMKL++++P + DLD
Sbjct: 685 QRQVEFLSMKLSTISP---ELNSDLD 707
>gi|357113290|ref|XP_003558437.1| PREDICTED: transcription factor bHLH74-like [Brachypodium
distachyon]
Length = 296
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/308 (34%), Positives = 146/308 (47%), Gaps = 70/308 (22%)
Query: 30 LYYPPKFPTHDDHQEMIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEPSNNNSLAT 89
+Y PP + +D ++ N LLD A F D++ P +N +
Sbjct: 1 MYSPPCTASGNDGEQGFTAGANPIALLDHAMDF------------DEHMLFPMHNVGMQD 48
Query: 90 KNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDP---REVKSKK 146
Q +S T+ + + KRK SSS +S + REV S+K
Sbjct: 49 GVQFYNPTSG----TELSRNMSMEKCLKGGKRKGSGEGSSSMHSQEGTGAVSKREVNSEK 104
Query: 147 QKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKIS 206
DA+ + DY+H+RA+RGQAT++HSLAER RREKI+
Sbjct: 105 -----AGDAESNRE------------------DYVHIRAKRGQATNNHSLAERFRREKIN 141
Query: 207 ERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
ERMK LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKL++V+P + DLD
Sbjct: 142 ERMKHLQDLVPGCNKITGKAMMLDEIINYVQSLQRQVEFLSMKLSAVSP---ELNCDLDF 198
Query: 267 TFMVRPDD-----------------------QQNLN--SIIAASASAPQVQCSPTAQLTA 301
++ P D QQ L+ + +S + V + TAQL+A
Sbjct: 199 QDILCPQDARSAFPGYGPRLSNVHPNLYRASQQGLSRPELYGSSPNPANVHLARTAQLSA 258
Query: 302 FADTTTAF 309
F + +
Sbjct: 259 FPQRSVVW 266
>gi|388504966|gb|AFK40549.1| unknown [Medicago truncatula]
Length = 278
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 63/75 (84%), Positives = 67/75 (89%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
YIHVRARRGQATDSH LAER RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q L
Sbjct: 148 YIHVRARRGQATDSHGLAERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSL 207
Query: 240 QNQVEFLSMKLASVN 254
Q QVEFLSMKL +VN
Sbjct: 208 QRQVEFLSMKLEAVN 222
>gi|312281887|dbj|BAJ33809.1| unnamed protein product [Thellungiella halophila]
Length = 304
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKE 175
+M+ + + N + SF + + + + K +K+K + + K S +++E +
Sbjct: 75 QMEPVKNDEVNRAISFQNKRKPEGKTEKREKKKIKTEAETETSMKGKSNMSNTETSSEIQ 134
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
P DYIHVRARRG+ATD HSLAER RREKIS++MK LQ +VPGC KVTGKA MLDEIINY
Sbjct: 135 KP-DYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCTKVTGKAGMLDEIINY 193
Query: 236 VQFLQNQVEFLSMKLASVNP 255
VQ LQ QVEFLSMKL+ +NP
Sbjct: 194 VQSLQQQVEFLSMKLSVLNP 213
>gi|224120394|ref|XP_002331037.1| predicted protein [Populus trichocarpa]
gi|222872967|gb|EEF10098.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 75/84 (89%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI++RMK+LQ+LVPGC+K++G A +LDEIIN+VQ L
Sbjct: 174 YVHVRARRGQATDSHSLAERARREKINQRMKLLQELVPGCNKISGTALVLDEIINHVQSL 233
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVEFLSM+LA+VNP DF +D
Sbjct: 234 QCQVEFLSMRLAAVNPRI-DFNLD 256
>gi|168024189|ref|XP_001764619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684197|gb|EDQ70601.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 351
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/91 (73%), Positives = 76/91 (83%), Gaps = 3/91 (3%)
Query: 168 SEQKVAK--EPPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
S +KV K +PPK +IHVRARRGQATD HSLAER RREKIS RMK LQ LVPGC +VTG
Sbjct: 132 SGKKVKKKEQPPKQGFIHVRARRGQATDGHSLAERARREKISNRMKFLQALVPGCSEVTG 191
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
KA ML+EIINYV+ LQ Q+EFLSMKLA+V+P
Sbjct: 192 KAVMLEEIINYVKSLQRQIEFLSMKLAAVDP 222
>gi|449450566|ref|XP_004143033.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 91/132 (68%), Gaps = 7/132 (5%)
Query: 126 NASSSFNSAQSKDPREVKSKKQKKGNVN---DAKKEEKENSPKADSEQKVAKEPPKDYIH 182
NA +FN +P E+ K K V A K +S KA + + P ++YIH
Sbjct: 149 NAEDNFNV----EPTEILDKADKTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIH 204
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V+ARRG+A ++HSLAERVRREKISERMK+LQ+LVPGC ++TGK +LDEIINYVQ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 243 VEFLSMKLASVN 254
VEFLSMKLASV
Sbjct: 265 VEFLSMKLASVG 276
>gi|356504821|ref|XP_003521193.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 372
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK++G A +LDEIIN+VQ L
Sbjct: 203 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 262
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSMKLA+VNP DF +D
Sbjct: 263 QRQVEILSMKLAAVNPRI-DFSLD 285
>gi|363808336|ref|NP_001242250.1| transcription factor bHLH48-like [Glycine max]
gi|256002927|gb|ACU52707.1| bHLH transcription factor PTF1 [Glycine max]
Length = 366
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK++G A +LDEIIN+VQ L
Sbjct: 197 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCDKISGTAMVLDEIINHVQSL 256
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSMKLA+VNP DF +D
Sbjct: 257 QRQVEILSMKLAAVNPRI-DFSLD 279
>gi|357141712|ref|XP_003572320.1| PREDICTED: transcription factor bHLH49-like [Brachypodium
distachyon]
Length = 327
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/99 (68%), Positives = 81/99 (81%), Gaps = 4/99 (4%)
Query: 168 SEQKVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
S+ K A E K+ Y+HVRAR QAT+SHS+AE++RREKISERMK+LQ LVPGC KVTGKA
Sbjct: 132 SKGKGAGERQKEGYVHVRARSEQATNSHSIAEKLRREKISERMKLLQDLVPGCSKVTGKA 191
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
MLDEIINYVQ LQ QVEFLSMKL++VNP G+D++
Sbjct: 192 VMLDEIINYVQSLQRQVEFLSMKLSTVNP---RLGVDIE 227
>gi|168009958|ref|XP_001757672.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691366|gb|EDQ77729.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 136 bits (342), Expect = 2e-29, Method: Composition-based stats.
Identities = 66/78 (84%), Positives = 72/78 (92%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC K+TGKA ML+EIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKFLQDLVPGCSKITGKAVMLEEIINYVQ 60
Query: 238 FLQNQVEFLSMKLASVNP 255
LQ Q+EFLSMKLA+V+P
Sbjct: 61 SLQRQIEFLSMKLAAVDP 78
>gi|225441702|ref|XP_002282897.1| PREDICTED: transcription factor bHLH60 [Vitis vinifera]
gi|297739713|emb|CBI29895.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LDEII++VQ L
Sbjct: 194 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIISHVQSL 253
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVEFLSM+LA+VNP DF +D
Sbjct: 254 QRQVEFLSMRLAAVNPRI-DFNLD 276
>gi|312281897|dbj|BAJ33814.1| unnamed protein product [Thellungiella halophila]
Length = 375
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ L
Sbjct: 197 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 256
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP DF +D
Sbjct: 257 QRQVEMLSMRLAAVNPRI-DFNLD 279
>gi|20127060|gb|AAM10949.1|AF488593_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 379
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ L
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP DF +D
Sbjct: 261 QRQVEMLSMRLAAVNPRI-DFNLD 283
>gi|30695836|ref|NP_850745.1| transcription factor bHLH60 [Arabidopsis thaliana]
gi|6729523|emb|CAB67608.1| putative protein [Arabidopsis thaliana]
gi|22655000|gb|AAM98091.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|27764962|gb|AAO23602.1| AT3g57800/T10K17_10 [Arabidopsis thaliana]
gi|332646182|gb|AEE79703.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 379
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/84 (73%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ L
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 260
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP DF +D
Sbjct: 261 QRQVEMLSMRLAAVNPRI-DFNLD 283
>gi|224118802|ref|XP_002317910.1| predicted protein [Populus trichocarpa]
gi|222858583|gb|EEE96130.1| predicted protein [Populus trichocarpa]
Length = 273
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 88/125 (70%), Gaps = 9/125 (7%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
+V K+ NVN +++ + K++ + K PKD +HVRARRGQATDSHSLAERV
Sbjct: 122 QVSESGSKRRNVNSSRRGK---GVKSNEDGK-----PKDVVHVRARRGQATDSHSLAERV 173
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
RR KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQNQVEFLSMKL + + FYDF
Sbjct: 174 RRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAAS-TFYDF 232
Query: 261 GMDLD 265
+ D
Sbjct: 233 NAETD 237
>gi|223702424|gb|ACN21643.1| putative basic helix-loop-helix protein BHLH6 [Lotus japonicus]
Length = 364
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 75/97 (77%), Gaps = 17/97 (17%)
Query: 175 EPPK-DYIHVRARRGQATDSHSLAERV----------------RREKISERMKILQKLVP 217
EPPK DYIHVRARRGQATDSHS+AERV RREKISERMKILQ LVP
Sbjct: 115 EPPKQDYIHVRARRGQATDSHSIAERVIHFSLCLSISYLLLVARREKISERMKILQDLVP 174
Query: 218 GCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
GC+K+ GKA +LDEIINY+Q LQ+QVEFLSMKL +VN
Sbjct: 175 GCNKMIGKALVLDEIINYIQSLQHQVEFLSMKLEAVN 211
>gi|255645941|gb|ACU23459.1| unknown [Glycine max]
Length = 193
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 70/82 (85%), Gaps = 1/82 (1%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
A++ A E P DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC+KVTGK
Sbjct: 113 AETSNSKASEKP-DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKVTGK 171
Query: 226 AFMLDEIINYVQFLQNQVEFLS 247
A MLDEIINYVQ LQ QVEFLS
Sbjct: 172 AGMLDEIINYVQSLQRQVEFLS 193
>gi|224066981|ref|XP_002302310.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
gi|222844036|gb|EEE81583.1| hypothetical protein POPTRDRAFT_754747 [Populus trichocarpa]
Length = 309
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 70/79 (88%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
+D + K +PP+DYIHVRAR+GQATDSHSL ERVRREKISERMK+LQ LVPGC+KVTGK
Sbjct: 115 SDIQNKANSKPPEDYIHVRARKGQATDSHSLVERVRREKISERMKLLQNLVPGCNKVTGK 174
Query: 226 AFMLDEIINYVQFLQNQVE 244
AFMLDEIINYVQ LQ QVE
Sbjct: 175 AFMLDEIINYVQSLQRQVE 193
>gi|356534621|ref|XP_003535851.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 357
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 65/96 (67%), Positives = 79/96 (82%), Gaps = 2/96 (2%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LD+IIN+VQ L
Sbjct: 189 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 248
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD-LDNTFMVRPDD 274
QN+VE LSMKLA+VNP+ DF +D L T V P D
Sbjct: 249 QNEVEILSMKLAAVNPVI-DFNLDSLLATEGVTPMD 283
>gi|449520908|ref|XP_004167474.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 341
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/132 (55%), Positives = 90/132 (68%), Gaps = 7/132 (5%)
Query: 126 NASSSFNSAQSKDPREVKSKKQKKGNVN---DAKKEEKENSPKADSEQKVAKEPPKDYIH 182
NA +FN +P E+ K K V A K +S KA + + P ++YIH
Sbjct: 149 NAEDNFNV----EPTEILDKADKTQKVEHRLSANFNTKPDSKKAKGGSQNVQAPKENYIH 204
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V+ARRG+A ++HSLAERVRREKISERMK+LQ+LVPGC ++TGK +LDEIINYVQ LQ Q
Sbjct: 205 VQARRGRAANNHSLAERVRREKISERMKLLQQLVPGCHQITGKTVVLDEIINYVQSLQQQ 264
Query: 243 VEFLSMKLASVN 254
VE LSMKLASV
Sbjct: 265 VELLSMKLASVG 276
>gi|356498448|ref|XP_003518064.1| PREDICTED: transcription factor bHLH48-like [Glycine max]
Length = 354
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LD+IIN+VQ L
Sbjct: 185 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 244
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
QN+VE LSMKLA+VNP+ DF +D
Sbjct: 245 QNEVEILSMKLAAVNPVI-DFNLD 267
>gi|449462268|ref|XP_004148863.1| PREDICTED: transcription factor bHLH62-like [Cucumis sativus]
Length = 187
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 69/76 (90%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DY+HVRARRG+ATDSHSLAER RREKISERMK LQ LVPGC+K+ GKA MLDEIINYVQ
Sbjct: 2 DYVHVRARRGKATDSHSLAERARREKISERMKYLQNLVPGCNKIAGKAGMLDEIINYVQS 61
Query: 239 LQNQVEFLSMKLASVN 254
LQ QVEFLSMK+A++N
Sbjct: 62 LQQQVEFLSMKVAALN 77
>gi|255582765|ref|XP_002532159.1| DNA binding protein, putative [Ricinus communis]
gi|223528169|gb|EEF30233.1| DNA binding protein, putative [Ricinus communis]
Length = 190
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E PK+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIIN
Sbjct: 65 EKPKEVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 124
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
YVQ LQNQVEFLSMKL + + FYDF + D
Sbjct: 125 YVQSLQNQVEFLSMKLTAAST-FYDFNSETD 154
>gi|225455954|ref|XP_002276500.1| PREDICTED: transcription factor BEE 3 [Vitis vinifera]
gi|297734215|emb|CBI15462.3| unnamed protein product [Vitis vinifera]
Length = 265
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/151 (53%), Positives = 96/151 (63%), Gaps = 16/151 (10%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPRE--VKSKKQKKGNVNDAKKE-EKENSPKADSEQKVAK 174
+KKRK R +AS S + S E +K K G A K EKE+
Sbjct: 91 NKKRKARVDASESSSGNSSTPACESGLKRGKNSSGRGKRAMKSIEKED------------ 138
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E P++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIIN
Sbjct: 139 EKPREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIIN 198
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
YVQ LQNQVEFLSMKL + + +YDF D D
Sbjct: 199 YVQSLQNQVEFLSMKLTAAS-QYYDFNSDTD 228
>gi|413954819|gb|AFW87468.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 372
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/119 (57%), Positives = 83/119 (69%), Gaps = 12/119 (10%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
+ K KKG EEK D E+ Y+HVRARRGQATDSHSLAER RR
Sbjct: 164 QGKAAKKGKT----AEEKLAGGDGDDEKPA-------YVHVRARRGQATDSHSLAERARR 212
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
EKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG
Sbjct: 213 EKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG 270
>gi|357509815|ref|XP_003625196.1| Transcription factor bHLH60 [Medicago truncatula]
gi|124360133|gb|ABN08149.1| Helix-loop-helix DNA-binding [Medicago truncatula]
gi|355500211|gb|AES81414.1| Transcription factor bHLH60 [Medicago truncatula]
Length = 340
Score = 134 bits (338), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LDEIIN+VQ L
Sbjct: 170 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCEKISGTALVLDEIINHVQTL 229
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSMKLA+VNP DF +D
Sbjct: 230 QRQVEILSMKLAAVNPRI-DFNLD 252
>gi|413956455|gb|AFW89104.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 239
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 75/90 (83%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
+++ A +DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQ LVPGC+K+TGKA
Sbjct: 139 ADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAM 198
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
MLDEIINYVQ LQ QVEFLSMKL+++ P F
Sbjct: 199 MLDEIINYVQSLQRQVEFLSMKLSAIRPGF 228
>gi|413956454|gb|AFW89103.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 263
Score = 134 bits (337), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 75/90 (83%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
+++ A +DY HVRA+RGQAT+SHSLAER RREKI+ RMK+LQ LVPGC+K+TGKA
Sbjct: 139 ADENAAGAKREDYAHVRAKRGQATNSHSLAERFRREKINVRMKLLQDLVPGCNKITGKAM 198
Query: 228 MLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
MLDEIINYVQ LQ QVEFLSMKL+++ P F
Sbjct: 199 MLDEIINYVQSLQRQVEFLSMKLSAIRPGF 228
>gi|30688981|ref|NP_850368.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|75304461|sp|Q8VZ02.1|BH048_ARATH RecName: Full=Transcription factor bHLH48; AltName: Full=Basic
helix-loop-helix protein 48; Short=AtbHLH48; Short=bHLH
48; AltName: Full=Transcription factor EN 97; AltName:
Full=bHLH transcription factor bHLH048
gi|17529250|gb|AAL38852.1| unknown protein [Arabidopsis thaliana]
gi|20465971|gb|AAM20171.1| unknown protein [Arabidopsis thaliana]
gi|51971465|dbj|BAD44397.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|330255008|gb|AEC10102.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 327
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTL 241
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP DF +D
Sbjct: 242 QRQVEMLSMRLAAVNPRI-DFNLD 264
>gi|449439405|ref|XP_004137476.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449531561|ref|XP_004172754.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 278
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 94/149 (63%), Gaps = 20/149 (13%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K+ KKG+ ND +K P++ +HVRARRGQATDSHS+AER+RR
Sbjct: 132 KEKRSKKGDTNDGEK-------------------PREVVHVRARRGQATDSHSVAERIRR 172
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQNQVEFLSMKL + + ++DF
Sbjct: 173 GKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASS-YHDFNS 231
Query: 263 DLDNTFMVRPDDQQNLNSIIAASASAPQV 291
D D ++ + + N I+ S+ Q+
Sbjct: 232 DSDAEDKLKGKEIREGNGGISMIGSSTQL 260
>gi|295913280|gb|ADG57897.1| transcription factor [Lycoris longituba]
Length = 176
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 72/84 (85%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC K++G A +LDEIIN+VQ L
Sbjct: 4 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKISGTALVLDEIINHVQSL 63
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q +VEFLSM+LA+VNP G+D
Sbjct: 64 QREVEFLSMRLAAVNPRIDFSGLD 87
>gi|294462391|gb|ADE76744.1| unknown [Picea sitchensis]
Length = 222
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/76 (80%), Positives = 70/76 (92%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
KDYIH+R+RRGQAT+SHSLAERVRREKISERMK+LQ LVPGC+KVTGKA +L+ IINYVQ
Sbjct: 107 KDYIHLRSRRGQATNSHSLAERVRREKISERMKVLQDLVPGCNKVTGKALVLENIINYVQ 166
Query: 238 FLQNQVEFLSMKLASV 253
LQ+QVE LS+KL SV
Sbjct: 167 SLQSQVEILSVKLTSV 182
>gi|357440189|ref|XP_003590372.1| Transcription factor BEE [Medicago truncatula]
gi|355479420|gb|AES60623.1| Transcription factor BEE [Medicago truncatula]
Length = 326
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/84 (70%), Positives = 74/84 (88%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVR RRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC+K++G A +LD+IIN+VQ L
Sbjct: 157 YVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSL 216
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q++VE LSMKLA+VNP+ DF +D
Sbjct: 217 QHEVEILSMKLAAVNPII-DFNLD 239
>gi|413954820|gb|AFW87469.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 359
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ L
Sbjct: 177 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 236
Query: 240 QNQVEFLSMKLASVNPMFYDFG 261
Q QVE+LSM+LA+VNP DFG
Sbjct: 237 QRQVEYLSMRLAAVNPRV-DFG 257
>gi|218198545|gb|EEC80972.1| hypothetical protein OsI_23697 [Oryza sativa Indica Group]
Length = 286
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ L
Sbjct: 104 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 163
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLDN 266
Q QVE+LSM+LA+VNP DFG LDN
Sbjct: 164 QRQVEYLSMRLAAVNPRV-DFG-GLDN 188
>gi|51969310|dbj|BAD43347.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
gi|51970180|dbj|BAD43782.1| putative bHLH transcription factor (bHLH048) [Arabidopsis thaliana]
Length = 327
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDK+ G +LDEIIN+VQ L
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTGLVLDEIINHVQTL 241
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP DF +D
Sbjct: 242 QRQVEMLSMRLAAVNPRI-DFNLD 264
>gi|222635879|gb|EEE66011.1| hypothetical protein OsJ_21966 [Oryza sativa Japonica Group]
Length = 325
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 75/87 (86%), Gaps = 2/87 (2%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ L
Sbjct: 143 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 202
Query: 240 QNQVEFLSMKLASVNPMFYDFGMDLDN 266
Q QVE+LSM+LA+VNP DFG LDN
Sbjct: 203 QRQVEYLSMRLAAVNPRV-DFG-GLDN 227
>gi|357117653|ref|XP_003560578.1| PREDICTED: transcription factor bHLH48-like [Brachypodium
distachyon]
Length = 259
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 63/107 (58%), Positives = 82/107 (76%), Gaps = 1/107 (0%)
Query: 155 AKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQK 214
AK++ + +A + ++ Y+HVRARRGQATDSHSLAER RREKI+ RM++L++
Sbjct: 52 AKRKADHAADRASKDAGGGEDEKPAYVHVRARRGQATDSHSLAERARREKINARMELLKE 111
Query: 215 LVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG
Sbjct: 112 LVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG 157
>gi|297824189|ref|XP_002879977.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
gi|297325816|gb|EFH56236.1| hypothetical protein ARALYDRAFT_483321 [Arabidopsis lyrata subsp.
lyrata]
Length = 326
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDK+ G A +LDEIIN+VQ L
Sbjct: 181 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSL 240
Query: 240 QNQVEFLSMKLASVNPMFYDFGMD 263
Q QVE LSM+LA+VNP +F +D
Sbjct: 241 QRQVEMLSMRLAAVNPRV-EFNLD 263
>gi|125564328|gb|EAZ09708.1| hypothetical protein OsI_31996 [Oryza sativa Indica Group]
Length = 236
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 112/193 (58%), Gaps = 23/193 (11%)
Query: 184 RARRGQATDSHSL---AERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ R+ + D+ SL +VRRE+ISERM++LQ LVPGCDKVTGKA +LDEIINYVQ LQ
Sbjct: 59 KKRKPREEDTASLNSAHSKVRRERISERMRMLQALVPGCDKVTGKALILDEIINYVQSLQ 118
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSI----IAASASAPQVQCSPT 296
NQVEFLSM++AS++P+ Y FG+D D D Q + + +A AS SP
Sbjct: 119 NQVEFLSMRIASLSPVLYGFGIDSD----AFSDHSQKMEGMFHEAVAIPASVLNRGSSP- 173
Query: 297 AQLTAFADTTTAFAPADHRNNYPVLDTALLLQQGQRPNALIYQDNGNSLLWDVEDQKQRF 356
AQ A DT+ N P T L +Q G N+L QDNG+ ++ V + +Q
Sbjct: 174 AQSHAIMDTS---------NTSPTPYT-LQVQGGSNNNSL-SQDNGSYIMQTVGEPRQEL 222
Query: 357 LNPSGFTSNLCSF 369
N + +CSF
Sbjct: 223 FNQVVLNNYMCSF 235
>gi|413943655|gb|AFW76304.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 370
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/82 (73%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
Y+HVRARRGQATDSHSLAER RREKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ L
Sbjct: 154 YVHVRARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSL 213
Query: 240 QNQVEFLSMKLASVNPMFYDFG 261
Q QVE+LSM+LA+VNP DFG
Sbjct: 214 QRQVEYLSMRLATVNPR-GDFG 234
>gi|449439537|ref|XP_004137542.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
gi|449532109|ref|XP_004173026.1| PREDICTED: transcription factor BEE 3-like [Cucumis sativus]
Length = 265
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
++ +HVRARRGQATDSHSLAERVRR KI+ER++ L+ +VPGC K G A MLDEIINYVQ
Sbjct: 143 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQ 202
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLD 265
LQNQVEFLSMKLA+ + FYDF + D
Sbjct: 203 SLQNQVEFLSMKLAAAS-SFYDFNSEAD 229
>gi|225424017|ref|XP_002279412.1| PREDICTED: transcription factor bHLH75 [Vitis vinifera]
Length = 258
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P++ IHVRA+RGQATDSHSLAERVRREKI+E+++ LQ LVPGC K G A MLD IINYV
Sbjct: 134 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 193
Query: 237 QFLQNQVEFLSMKLASVNPMFYDF 260
Q LQNQ+EFLSMKL++ + FYDF
Sbjct: 194 QSLQNQIEFLSMKLSAAS-TFYDF 216
>gi|168024075|ref|XP_001764562.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684140|gb|EDQ70544.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 118
Score = 130 bits (326), Expect = 1e-27, Method: Composition-based stats.
Identities = 64/86 (74%), Positives = 74/86 (86%), Gaps = 1/86 (1%)
Query: 171 KVAKEPPKD-YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
K ++PPK +IHVRARRGQAT+SHSLAER RREKIS RMK LQ LVPGC +VTGKA ML
Sbjct: 6 KNKEQPPKQGFIHVRARRGQATNSHSLAERARREKISNRMKFLQALVPGCSEVTGKAVML 65
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNP 255
+EIINYV+ LQ Q+EFLSMKLA+V+P
Sbjct: 66 EEIINYVKSLQRQIEFLSMKLAAVDP 91
>gi|297737801|emb|CBI27002.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P++ IHVRA+RGQATDSHSLAERVRREKI+E+++ LQ LVPGC K G A MLD IINYV
Sbjct: 117 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 176
Query: 237 QFLQNQVEFLSMKLASVNPMFYDF 260
Q LQNQ+EFLSMKL++ + FYDF
Sbjct: 177 QSLQNQIEFLSMKLSAAS-TFYDF 199
>gi|147773703|emb|CAN76460.1| hypothetical protein VITISV_010828 [Vitis vinifera]
Length = 237
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P++ IHVRA+RGQATDSHSLAERVRREKI+E+++ LQ LVPGC K G A MLD IINYV
Sbjct: 113 PREVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKTMGMAVMLDVIINYV 172
Query: 237 QFLQNQVEFLSMKLASVNPMFYDF 260
Q LQNQ+EFLSMKL++ + FYDF
Sbjct: 173 QSLQNQIEFLSMKLSAAS-TFYDF 195
>gi|4567302|gb|AAD23713.1| unknown protein [Arabidopsis thaliana]
Length = 226
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/92 (67%), Positives = 73/92 (79%), Gaps = 9/92 (9%)
Query: 180 YIHVRARRGQATDSHSLAERV--------RREKISERMKILQKLVPGCDKVTGKAFMLDE 231
Y+HVRARRGQATD+HSLAERV RREKI+ RMK+LQ+LVPGCDK+ G A +LDE
Sbjct: 126 YVHVRARRGQATDNHSLAERVIHNLTDMARREKINARMKLLQELVPGCDKIQGTALVLDE 185
Query: 232 IINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
IIN+VQ LQ QVE LSM+LA+VNP DF +D
Sbjct: 186 IINHVQTLQRQVEMLSMRLAAVNPRI-DFNLD 216
>gi|297839255|ref|XP_002887509.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
gi|297333350|gb|EFH63768.1| hypothetical protein ARALYDRAFT_476520 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/92 (66%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E ++ +HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEII
Sbjct: 140 EEKDREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEII 199
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
NYVQ LQNQVEFLSMKL + + +YDF + D
Sbjct: 200 NYVQSLQNQVEFLSMKLTAASS-YYDFNSETD 230
>gi|30685840|ref|NP_173276.2| transcription factor BEE 1 [Arabidopsis thaliana]
gi|75299631|sp|Q8GZ13.1|BEE1_ARATH RecName: Full=Transcription factor BEE 1; AltName: Full=Basic
helix-loop-helix protein 44; Short=AtbHLH44; Short=bHLH
44; AltName: Full=Protein Brassinosteroid enhanced
expression 1; AltName: Full=Transcription factor EN 77;
AltName: Full=bHLH transcription factor bHLH044
gi|26449635|dbj|BAC41942.1| putative bHLH transcription factor bHLH044 [Arabidopsis thaliana]
gi|28950817|gb|AAO63332.1| At1g18400 [Arabidopsis thaliana]
gi|34391437|gb|AAN18283.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332191590|gb|AEE29711.1| transcription factor BEE 1 [Arabidopsis thaliana]
Length = 260
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQ
Sbjct: 143 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 202
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD 265
NQVEFLSMKL + + FYDF + D
Sbjct: 203 NQVEFLSMKLTAASS-FYDFNSETD 226
>gi|147821091|emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
Length = 328
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/178 (44%), Positives = 94/178 (52%), Gaps = 53/178 (29%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS----EQKVAKEPPKDY 180
T++ S N++ K + K + + N K E E S A E K A++ +DY
Sbjct: 100 TSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDY 154
Query: 181 IHVRARRGQATDSHSLAERV---------------------------------------- 200
IHVRARRGQATDSHSLAERV
Sbjct: 155 IHVRARRGQATDSHSLAERVMQFYTLLIFCFLVVPQMPKLKRIGLSWNSRSRCRCIGVSV 214
Query: 201 ----RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
RREKISERMKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 215 YINARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 272
>gi|224135389|ref|XP_002322061.1| predicted protein [Populus trichocarpa]
gi|222869057|gb|EEF06188.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 60/83 (72%), Positives = 69/83 (83%), Gaps = 1/83 (1%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
++ +HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ
Sbjct: 152 REVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKTMGMAVMLDEIINYVQ 211
Query: 238 FLQNQVEFLSMKLASVNPMFYDF 260
LQNQVEFLSMKL + + FYDF
Sbjct: 212 SLQNQVEFLSMKLTAAS-TFYDF 233
>gi|116830915|gb|ABK28414.1| unknown [Arabidopsis thaliana]
Length = 224
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K++ G+ K+ E+E + D QK PKD +HVRA+RGQATDSHSLAERVRR
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQK-----PKDVVHVRAKRGQATDSHSLAERVRR 123
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
EKI+ER+K LQ LVPGC K G A MLD II+YV+ LQNQ+EFLSMKL++ + + +
Sbjct: 124 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSL 183
Query: 263 DLDNT 267
D++ T
Sbjct: 184 DIEPT 188
>gi|295913282|gb|ADG57898.1| transcription factor [Lycoris longituba]
Length = 206
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 73/91 (80%), Gaps = 4/91 (4%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK--VTGKAFMLDEIINYVQ 237
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGC K ++G A +LD+IIN+VQ
Sbjct: 29 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCSKGQISGTALVLDKIINHVQ 88
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
LQ QVEFLSM+LA+V P DF LDN
Sbjct: 89 SLQRQVEFLSMRLAAVTPRI-DFS-GLDNIL 117
>gi|18395643|ref|NP_564229.1| transcription factor bHLH75 [Arabidopsis thaliana]
gi|218563498|sp|A4D998.1|BH075_ARATH RecName: Full=Transcription factor bHLH75; AltName: Full=Basic
helix-loop-helix protein 75; Short=AtbHLH75; Short=bHLH
75; AltName: Full=Transcription factor EN 78; AltName:
Full=bHLH transcription factor bHLH075
gi|21618141|gb|AAM67191.1| helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
gi|51969656|dbj|BAD43520.1| putative bHLH transcription factor (bHLH075) [Arabidopsis thaliana]
gi|91805851|gb|ABE65654.1| basic helix-loop-helix family protein [Arabidopsis thaliana]
gi|332192486|gb|AEE30607.1| transcription factor bHLH75 [Arabidopsis thaliana]
Length = 223
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K++ G+ K+ E+E + D QK PKD +HVRA+RGQATDSHSLAERVRR
Sbjct: 69 KGNKEESGSKRRRKRSEEEEAMNGDETQK-----PKDVVHVRAKRGQATDSHSLAERVRR 123
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
EKI+ER+K LQ LVPGC K G A MLD II+YV+ LQNQ+EFLSMKL++ + + +
Sbjct: 124 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSL 183
Query: 263 DLDNT 267
D++ T
Sbjct: 184 DIEPT 188
>gi|238005608|gb|ACR33839.1| unknown [Zea mays]
gi|413938469|gb|AFW73020.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 246
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 61/67 (91%)
Query: 179 DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
DYIHVRARRGQATDSHSLAERVRRE+ISERM+ LQ+LVPGC KVTGKA MLDEIINYVQ
Sbjct: 142 DYIHVRARRGQATDSHSLAERVRRERISERMRYLQELVPGCSKVTGKAGMLDEIINYVQS 201
Query: 239 LQNQVEF 245
LQ QVE
Sbjct: 202 LQKQVEV 208
>gi|11761480|gb|AAG28811.2|AC079374_14 helix-loop-helix protein homolog, putative [Arabidopsis thaliana]
Length = 166
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
K K++ G+ K+ E+E + D QK PKD +HVRA+RGQATDSHSLAERVRR
Sbjct: 12 KGNKEESGSKRRRKRSEEEEAMNGDETQK-----PKDVVHVRAKRGQATDSHSLAERVRR 66
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
EKI+ER+K LQ LVPGC K G A MLD II+YV+ LQNQ+EFLSMKL++ + + +
Sbjct: 67 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNSL 126
Query: 263 DLDNT 267
D++ T
Sbjct: 127 DIEPT 131
>gi|223702430|gb|ACN21646.1| putative basic helix-loop-helix protein BHLH5 [Lotus japonicus]
gi|388495576|gb|AFK35854.1| unknown [Lotus japonicus]
Length = 268
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/85 (69%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+HVRARRGQATDSHSLAERVRR KI+E++K LQ +VPGC K G A MLDEIINYVQ LQ
Sbjct: 150 VHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAIMLDEIINYVQSLQ 209
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD 265
+QVEFLSMKL + + FYDF +++
Sbjct: 210 HQVEFLSMKLTAAS-TFYDFNSEIN 233
>gi|356529573|ref|XP_003533364.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 273
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ +VPGC K G A MLDEII
Sbjct: 147 EEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEII 206
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
NYVQ LQ+QVEFLS+KL + + FYDF + D
Sbjct: 207 NYVQSLQHQVEFLSLKLTAAS-TFYDFNSETD 237
>gi|334183900|ref|NP_001185394.1| transcription factor BEE 3 [Arabidopsis thaliana]
gi|332197393|gb|AEE35514.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 260
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEIINYVQ LQN
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 242 QVEFLSMKLASVNPMFYDFGMDLD 265
QVEFLSMKL + + +YDF + D
Sbjct: 206 QVEFLSMKLTAASS-YYDFNSETD 228
>gi|30698967|ref|NP_177524.2| transcription factor BEE 3 [Arabidopsis thaliana]
gi|75299562|sp|Q8GWK7.1|BEE3_ARATH RecName: Full=Transcription factor BEE 3; AltName: Full=Basic
helix-loop-helix protein 50; Short=AtbHLH50; Short=bHLH
50; AltName: Full=Protein Brassinosteroid enhanced
expression 3; AltName: Full=Transcription factor EN 76;
AltName: Full=bHLH transcription factor bHLH050
gi|26452579|dbj|BAC43374.1| putative bHLH transcription factor bHLH050 [Arabidopsis thaliana]
gi|29824159|gb|AAP04040.1| putative helix-loop-helix DNA-binding protein [Arabidopsis
thaliana]
gi|332197392|gb|AEE35513.1| transcription factor BEE 3 [Arabidopsis thaliana]
Length = 261
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEIINYVQ LQN
Sbjct: 146 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 205
Query: 242 QVEFLSMKLASVNPMFYDFGMDLD 265
QVEFLSMKL + + +YDF + D
Sbjct: 206 QVEFLSMKLTAASS-YYDFNSETD 228
>gi|356520601|ref|XP_003528950.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 272
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/92 (65%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E K+ +HVRARRGQATDSHSLAERVRR KI+E+++ LQ +VPGC K G A MLDEII
Sbjct: 146 EEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEII 205
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
NYVQ LQ+QVEFLS+KL + + FYDF + D
Sbjct: 206 NYVQSLQHQVEFLSLKLTAAS-TFYDFNSETD 236
>gi|6714300|gb|AAF25996.1|AC013354_15 F15H18.11 [Arabidopsis thaliana]
Length = 1154
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQ
Sbjct: 1037 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1096
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD 265
NQVEFLSMKL + + FYDF + D
Sbjct: 1097 NQVEFLSMKLTAASS-FYDFNSETD 1120
>gi|12324208|gb|AAG52074.1|AC012679_12 putative helix-loop-helix DNA-binding protein; 87971-89290
[Arabidopsis thaliana]
Length = 250
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/84 (71%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHS+AERVRR KI+ER+K LQ +VPGC K G A MLDEIINYVQ LQN
Sbjct: 135 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 194
Query: 242 QVEFLSMKLASVNPMFYDFGMDLD 265
QVEFLSMKL + + +YDF + D
Sbjct: 195 QVEFLSMKLTAASS-YYDFNSETD 217
>gi|119655907|gb|ABL86246.1| BHLHogu [Brassica rapa subsp. chinensis]
Length = 122
Score = 125 bits (315), Expect = 2e-26, Method: Composition-based stats.
Identities = 67/108 (62%), Positives = 82/108 (75%), Gaps = 4/108 (3%)
Query: 156 KKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
KK + K+ S ++ K P Y+HVRARRGQATDSHSLAER RREKI+ RMK+L++L
Sbjct: 9 KKVKGSTKMKSKSSEENGKLP---YVHVRARRGQATDSHSLAERARREKINARMKLLREL 65
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
VPGCDK+ G A +LDEIIN+VQ LQ QVE LSM+LA+VNP DF +D
Sbjct: 66 VPGCDKIQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRI-DFNLD 112
>gi|224127674|ref|XP_002329336.1| predicted protein [Populus trichocarpa]
gi|222870790|gb|EEF07921.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 99/156 (63%), Gaps = 18/156 (11%)
Query: 103 VTQSTVTTTATTTRMD----KKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKE 158
++ +TV T T + D KKRK+ ++SS+ S P ++ +KK N+ +KK
Sbjct: 78 LSTATVVHTVTLNQNDSHDSKKRKSMEQSTSSYIS-----PTASTNETKKKNNLGGSKKG 132
Query: 159 EKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
E + +E + IHVRA+RGQATDSHS+AERVRREKI+ +++ LQ LVPG
Sbjct: 133 ENKEKEGDKAE---------EVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPG 183
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
C + G A ML+EIINYV LQNQVEFLSM+LA+ +
Sbjct: 184 CHRSMGMAVMLEEIINYVHSLQNQVEFLSMELAAAS 219
>gi|297844782|ref|XP_002890272.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
gi|297336114|gb|EFH66531.1| F15H18.11 [Arabidopsis lyrata subsp. lyrata]
Length = 1143
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQ
Sbjct: 1026 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQ 1085
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD 265
NQVEFLSMKL + + FYDF + D
Sbjct: 1086 NQVEFLSMKLNAASS-FYDFSSETD 1109
>gi|168050670|ref|XP_001777781.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670882|gb|EDQ57443.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 67
Score = 124 bits (311), Expect = 7e-26, Method: Composition-based stats.
Identities = 61/67 (91%), Positives = 62/67 (92%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRGQATDSHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ
Sbjct: 1 QDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCKKVTGKAVMLDEIINYVQ 60
Query: 238 FLQNQVE 244
FLQ QVE
Sbjct: 61 FLQRQVE 67
>gi|224057820|ref|XP_002299340.1| predicted protein [Populus trichocarpa]
gi|222846598|gb|EEE84145.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 88/135 (65%), Gaps = 8/135 (5%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E P Y+HVRARRG+ATDSHSLAERVRRE+IS +MK+LQ LVPGCD++TGKA +LDEII
Sbjct: 69 EHPTGYVHVRARRGEATDSHSLAERVRRERISAKMKLLQSLVPGCDQITGKALILDEIIR 128
Query: 235 YVQFLQNQVEFLSMKLASVNPMFY-DFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQC 293
YVQ L++++ L +L VN M DF ++ + + Q + ++ P
Sbjct: 129 YVQSLKDRIGSLEAELVLVNEMVINDFKVNYNM-------ETQAWQELFSSELQLPSDLE 181
Query: 294 SPTAQLTAFADTTTA 308
S ++QL+ F T+ A
Sbjct: 182 SGSSQLSPFVGTSDA 196
>gi|58743491|gb|AAW81732.1| putative bZIPtranscription factor protein [Brassica oleracea]
Length = 263
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+HVRARRGQATDSHSLAERVRR KI+ER++ LQ +VPGC K G A MLDEIINYVQ LQ
Sbjct: 146 VHVRARRGQATDSHSLAERVRRGKINERLRCLQDIVPGCYKSMGMATMLDEIINYVQSLQ 205
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLD 265
NQVE LSMKL + + FYDF + D
Sbjct: 206 NQVELLSMKLTAASS-FYDFNSETD 229
>gi|89257428|gb|ABD64920.1| bHLH transcription factor, putative [Brassica oleracea]
Length = 155
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 65/81 (80%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EPPKDYIHVRARRGQ DSH AERVRREKISE + +LQ LVP ++TGKA LDEIIN
Sbjct: 13 EPPKDYIHVRARRGQPADSHRFAERVRREKISEMLTLLQDLVPDSSRITGKADSLDEIIN 72
Query: 235 YVQFLQNQVEFLSMKLASVNP 255
YVQ L+ QVE L MKLA++NP
Sbjct: 73 YVQSLKRQVELLYMKLATINP 93
>gi|356513103|ref|XP_003525253.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 246
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ +VPGC K G A MLDEIINYV
Sbjct: 121 PNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYV 180
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
Q LQ+QVEFLSMKL + + +YDF + D
Sbjct: 181 QSLQHQVEFLSMKLNAAS-TYYDFNSESD 208
>gi|356527821|ref|XP_003532505.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 252
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/89 (64%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P + +HVRA+RGQATDSHSLAERVRR KI+E+++ LQ +VPGC K G A MLDEIINYV
Sbjct: 127 PNEVVHVRAKRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAIMLDEIINYV 186
Query: 237 QFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
Q LQ+QVEFLSMKL + + +YD + D
Sbjct: 187 QSLQHQVEFLSMKLTAAS-TYYDLNSESD 214
>gi|297606176|ref|NP_001058071.2| Os06g0613500 [Oryza sativa Japonica Group]
gi|255677227|dbj|BAF19985.2| Os06g0613500, partial [Oryza sativa Japonica Group]
Length = 178
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 70/82 (85%), Gaps = 2/82 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQATDSHSLAER RREKI+ RM++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE
Sbjct: 1 ARRGQATDSHSLAERARREKINARMELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVE 60
Query: 245 FLSMKLASVNPMFYDFGMDLDN 266
+LSM+LA+VNP DFG LDN
Sbjct: 61 YLSMRLAAVNPRV-DFG-GLDN 80
>gi|388519201|gb|AFK47662.1| unknown [Lotus japonicus]
Length = 274
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
HVRARRGQATDSHSLAERVRR KI+E+++ LQ +VPGC K G A MLDEIINYVQ LQ+
Sbjct: 156 HVRARRGQATDSHSLAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQH 215
Query: 242 QVEFLSMKLASVNPMFYDFGMDLD 265
QVEFLS+KL + + +YDF + D
Sbjct: 216 QVEFLSLKLTAAS-TYYDFNSETD 238
>gi|295913621|gb|ADG58055.1| transcription factor [Lycoris longituba]
Length = 207
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/63 (84%), Positives = 59/63 (93%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+DYIHVRARRG+ATDSHSLAERVRRE+ISERMK L+ LVPGC+K+TGKA MLDEIINYVQ
Sbjct: 145 QDYIHVRARRGEATDSHSLAERVRRERISERMKYLEGLVPGCNKITGKAGMLDEIINYVQ 204
Query: 238 FLQ 240
LQ
Sbjct: 205 SLQ 207
>gi|255586626|ref|XP_002533944.1| DNA binding protein, putative [Ricinus communis]
gi|223526075|gb|EEF28430.1| DNA binding protein, putative [Ricinus communis]
Length = 267
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRA+RGQATDSHS+AERVRREKI+ +++ LQ LVPGC K G A ML+EIINYV LQ
Sbjct: 147 IHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVMLEEIINYVHSLQ 206
Query: 241 NQVEFLSMKLASVNPMFYDFGMDLDNT 267
NQVEFLSM+LA+ + YD ++ +++
Sbjct: 207 NQVEFLSMELAAAS-CSYDLNLETESS 232
>gi|224079313|ref|XP_002305819.1| predicted protein [Populus trichocarpa]
gi|222848783|gb|EEE86330.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 64/75 (85%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
K+ IHVRA+RGQATDSHS+AER+RREKI+ +++ LQ +VPGC K G A ML+EIINYV
Sbjct: 153 KEVIHVRAKRGQATDSHSIAERIRREKINNKLRCLQDIVPGCHKSMGMAVMLEEIINYVH 212
Query: 238 FLQNQVEFLSMKLAS 252
LQNQVEFLSM+LA+
Sbjct: 213 SLQNQVEFLSMELAA 227
>gi|414591362|tpg|DAA41933.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 384
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 65/105 (61%), Gaps = 29/105 (27%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD----------------- 220
KDYIHVRARRGQATDSHSLAERVRREKISERMK+LQ LVPGC
Sbjct: 273 KDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCSKVSKHRRPLLKIRLKTH 332
Query: 221 ------------KVTGKAFMLDEIINYVQFLQNQVEFLSMKLASV 253
KVTGKA MLDEIINYVQ LQ QVE + L S
Sbjct: 333 AYFNFQRLLDLVKVTGKAVMLDEIINYVQSLQCQVEVRAYDLHSA 377
>gi|296087271|emb|CBI33645.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/80 (68%), Positives = 64/80 (80%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P + IHVRARRGQATD+HS+AERVRREKI R++ LQ LVPGC K G A MLDEIINYV
Sbjct: 196 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKNKGMAVMLDEIINYV 255
Query: 237 QFLQNQVEFLSMKLASVNPM 256
LQNQVEFLS +LA+ + +
Sbjct: 256 HSLQNQVEFLSRELAAASSL 275
>gi|125526611|gb|EAY74725.1| hypothetical protein OsI_02616 [Oryza sativa Indica Group]
Length = 467
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 93/162 (57%), Gaps = 21/162 (12%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQK----KGNVNDAKKEEKENSPKADSEQKV---AK 174
+ RT+ + N QS +P K+KK K D K + + + KV A
Sbjct: 207 QRRTSPETMVNFPQSPEP-GTKAKKCKLSADAAGDEDTKPVAGDAGHGGNGKGKVLDAAG 265
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMK--ILQKLVPGCD--------KVTG 224
EPPKDYIHVRARRGQATDSHSLAERV + + + ++ D +VTG
Sbjct: 266 EPPKDYIHVRARRGQATDSHSLAERVNTAGVYAAIHNFVFSSILAFADAIAAVFHLQVTG 325
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
KA MLDEIINYVQ LQ QVEFLSMKL++VNP DF D+DN
Sbjct: 326 KAVMLDEIINYVQSLQRQVEFLSMKLSTVNPQL-DF--DVDN 364
>gi|168061161|ref|XP_001782559.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665966|gb|EDQ52634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/110 (57%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
Query: 178 KDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQ 237
+D+I VRARRGQATDS S+AE VR EKI +RMK LQ LVPGC KVTGK MLDEIINYVQ
Sbjct: 6 QDFIRVRARRGQATDSLSVAEWVRCEKIRKRMKYLQDLVPGCRKVTGKTDMLDEIINYVQ 65
Query: 238 FLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASAS 287
LQ Q E LSMKL +V+P D + L++ + Q ++I+ S S
Sbjct: 66 SLQCQAESLSMKLGAVHPAPLDH-LTLESLLSIEEVLQSQWSNILCTSDS 114
>gi|356554137|ref|XP_003545405.1| PREDICTED: transcription factor BEE 3-like [Glycine max]
Length = 305
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/92 (61%), Positives = 72/92 (78%), Gaps = 1/92 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E K+ ++VRAR GQATDS +LAERVRR KI+E+++ LQ +VPGC K G A MLDEII
Sbjct: 144 EEKAKEVVNVRARSGQATDSRNLAERVRRGKINEKLRYLQNIVPGCYKTMGMAVMLDEII 203
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLD 265
NYVQ LQNQVEFLS+KL + + FYDF ++D
Sbjct: 204 NYVQSLQNQVEFLSLKLTAPS-TFYDFNSEID 234
>gi|147810591|emb|CAN71967.1| hypothetical protein VITISV_017400 [Vitis vinifera]
Length = 271
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 56/85 (65%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV-----TGKAFMLDE 231
P + IHVRARRGQATD+HS+AERVRREKI R++ LQ LVPGC KV G A MLDE
Sbjct: 142 PDEVIHVRARRGQATDNHSIAERVRREKIKTRLRCLQDLVPGCYKVYDPQNKGMAVMLDE 201
Query: 232 IINYVQFLQNQVEFLSMKLASVNPM 256
IINYV LQNQVEFLS +LA+ + +
Sbjct: 202 IINYVHSLQNQVEFLSRELAAASSL 226
>gi|341941279|gb|AEL12217.1| putative cryptochrome-interacting basic helix-loop-helix 5 [Beta
vulgaris]
Length = 225
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFL 239
+++VRARRG+A DSHSLAERVRR+KIS +MK+LQ LVPGCDK TGK +LD IINY+ L
Sbjct: 133 FVYVRARRGEAVDSHSLAERVRRQKISSKMKLLQSLVPGCDKTTGKVPILDTIINYIHSL 192
Query: 240 QNQVEFLSMKLASVNPMF 257
Q+QV+ L +LA V+P F
Sbjct: 193 QDQVKSLMEELALVDPTF 210
>gi|218194642|gb|EEC77069.1| hypothetical protein OsI_15464 [Oryza sativa Indica Group]
Length = 403
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 65/95 (68%), Gaps = 22/95 (23%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
EP KDYIHVR RE+ISERMK+LQ LVPGC+K+TGKA MLDEIIN
Sbjct: 196 EPAKDYIHVR-----------------RERISERMKLLQSLVPGCNKITGKALMLDEIIN 238
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFM 269
YVQ LQ QVEFLSMKLA++NP +D D+ +M
Sbjct: 239 YVQSLQRQVEFLSMKLATMNPQ-----LDFDSHYM 268
>gi|30695832|ref|NP_567057.2| transcription factor bHLH60 [Arabidopsis thaliana]
gi|122214701|sp|Q3EAI1.1|BH060_ARATH RecName: Full=Transcription factor bHLH60; AltName: Full=Basic
helix-loop-helix protein 60; Short=AtbHLH60; Short=bHLH
60; AltName: Full=Transcription factor EN 91; AltName:
Full=bHLH transcription factor bHLH060
gi|332646181|gb|AEE79702.1| transcription factor bHLH60 [Arabidopsis thaliana]
Length = 426
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 72/131 (54%), Gaps = 48/131 (36%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT---------------- 223
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKIKIKVCFGVHL 260
Query: 224 -------------------------------GKAFMLDEIINYVQFLQNQVEFLSMKLAS 252
G A +LDEIIN+VQ LQ QVE LSM+LA+
Sbjct: 261 LMISGKKVAIFLWKVSCEDLIDCSFSPPRIQGTALVLDEIINHVQSLQRQVEMLSMRLAA 320
Query: 253 VNPMFYDFGMD 263
VNP DF +D
Sbjct: 321 VNPRI-DFNLD 330
>gi|356564005|ref|XP_003550247.1| PREDICTED: transcription factor BEE 1-like [Glycine max]
Length = 268
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATDSH+LAERVRR KI+E+++ LQ +VPGC K A MLDEIINYVQ LQ+QV
Sbjct: 152 RARRGQATDSHNLAERVRRGKINEKLRYLQNIVPGCYKTMSMAVMLDEIINYVQSLQHQV 211
Query: 244 EFLSMKLASVNPMFYDFGMDLD 265
EFLS++L + + FYDF ++D
Sbjct: 212 EFLSLELTAAS-TFYDFNSEID 232
>gi|255572100|ref|XP_002526990.1| DNA binding protein, putative [Ricinus communis]
gi|223533625|gb|EEF35362.1| DNA binding protein, putative [Ricinus communis]
Length = 189
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 51/70 (72%), Positives = 59/70 (84%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E PK+ IHVRA+RGQATDSHSLAERVRRE+I+E+++ LQ LVPGC K G A MLD IIN
Sbjct: 113 EKPKEVIHVRAKRGQATDSHSLAERVRRERINEKLRCLQDLVPGCYKTMGMAVMLDVIIN 172
Query: 235 YVQFLQNQVE 244
YVQ LQNQ+E
Sbjct: 173 YVQSLQNQIE 182
>gi|168024073|ref|XP_001764561.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684139|gb|EDQ70543.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 62
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 56/62 (90%), Positives = 56/62 (90%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATDSHSLAERVRREKISERMK LQ LVPGC KVTGKA MLDEIINYVQ LQ Q
Sbjct: 1 VRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCRKVTGKAVMLDEIINYVQSLQRQ 60
Query: 243 VE 244
VE
Sbjct: 61 VE 62
>gi|195643094|gb|ACG41015.1| bHLH transcription factor GBOF-1 [Zea mays]
Length = 151
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 7/109 (6%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
M++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FG+D D
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGLDSDGLH 60
Query: 269 MVRPDDQQNLNSII--AASASAPQV-QCSPTAQLTAFADTTTAFAPADH 314
D Q + + A + + P + Q SP A A DTTT ++ H
Sbjct: 61 ----DHAQKMGVMFQEALAMAGPVLSQASPAAPSEAIMDTTTPYSLHGH 105
>gi|357500329|ref|XP_003620453.1| Transcription factor BEE [Medicago truncatula]
gi|355495468|gb|AES76671.1| Transcription factor BEE [Medicago truncatula]
Length = 263
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%), Gaps = 10/93 (10%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+E K+ +HVRARRGQATDSHSLAERVRR KI+E++K LQ +VPGC K G A MLDEII
Sbjct: 146 EEKAKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLQNIVPGCYKTMGMAVMLDEII 205
Query: 234 NYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
NY FLS+KL + + +YDF + D+
Sbjct: 206 NY---------FLSLKLTAAST-YYDFNSEADD 228
>gi|224143968|ref|XP_002325140.1| predicted protein [Populus trichocarpa]
gi|222866574|gb|EEF03705.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 7/103 (6%)
Query: 162 NSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
N P+A A P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K
Sbjct: 18 NQPQASGSNGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 75
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSM----KLASVNPMFYDF 260
T KA MLDEII+YV+FLQ QV+ LSM A+V P+ D
Sbjct: 76 -TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADM 117
>gi|307136009|gb|ADN33865.1| bHLH transcription factor [Cucumis melo subsp. melo]
Length = 135
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 55/72 (76%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK+LQ LVPGC KVTGKA MLDEIINYVQ LQNQVEFLSMKLAS++P+ YDFGMD
Sbjct: 1 MKVLQTLVPGCHKVTGKASMLDEIINYVQSLQNQVEFLSMKLASLHPVLYDFGMDFPEVL 60
Query: 269 MVRPDDQQNLNS 280
+V + LN
Sbjct: 61 IVGTPASEILNG 72
>gi|225432880|ref|XP_002284047.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297737150|emb|CBI26351.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 108/225 (48%), Gaps = 24/225 (10%)
Query: 26 FFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAAVFETSCGDNHDHHSDDNCNEP--SN 83
F Q+ P +P HD + +V S V + S GD H + P
Sbjct: 13 FLEQILAIPSYPGHDPN----MVGTGST------MVLQLSSGDGSGHVAGGGFQGPVFPL 62
Query: 84 NNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVK 143
SL + +T V+ + + V ++ R +++ + ++ QS R
Sbjct: 63 GLSLESGIPATQVAPGSGERFRDDVDARGSSGRSERESVHLDGLFPAYGHVQSLSVRPAV 122
Query: 144 SKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRRE 203
+ V+ A + P A PP VRARRGQATD HS+AER+RRE
Sbjct: 123 PQ------VHQAFHGQPTPVPI-----TAAPHPPAIRPRVRARRGQATDPHSIAERLRRE 171
Query: 204 KISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+I+ERMK LQ+LVP +K T +A MLDEI++YV+FL+ QV+ LSM
Sbjct: 172 RIAERMKALQELVPSSNK-TDRAAMLDEIVDYVKFLRLQVKVLSM 215
>gi|255565001|ref|XP_002523493.1| conserved hypothetical protein [Ricinus communis]
gi|223537200|gb|EEF38832.1| conserved hypothetical protein [Ricinus communis]
Length = 474
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/103 (55%), Positives = 70/103 (67%), Gaps = 7/103 (6%)
Query: 162 NSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
N P+A A P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K
Sbjct: 237 NQPQASGSTGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 294
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMK----LASVNPMFYDF 260
T KA MLDEII+YV+FLQ QV+ LSM A+V P+ D
Sbjct: 295 -TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADI 336
>gi|115477539|ref|NP_001062365.1| Os08g0536800 [Oryza sativa Japonica Group]
gi|38175541|dbj|BAD01234.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|45736094|dbj|BAD13119.1| bHLH transcription factor-like protein [Oryza sativa Japonica
Group]
gi|113624334|dbj|BAF24279.1| Os08g0536800 [Oryza sativa Japonica Group]
Length = 143
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 92/165 (55%), Gaps = 27/165 (16%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
M++LQ LVPGCDKVTGKA +LDEIINYVQ LQNQVEFLSM++AS++P+ Y FGMD D
Sbjct: 1 MRMLQALVPGCDKVTGKALILDEIINYVQSLQNQVEFLSMRIASMSPVLYGFGMDSDGL- 59
Query: 269 MVRPDDQQNLNSIIAASASAPQV---QCSPTAQLTAFADTTTAFAPADHRNNYPVLDTAL 325
Q + + + + P Q SP A A DTT+ +Y +
Sbjct: 60 -----HDQKIGGMFQEALAMPNPVLNQSSP-APSQAIMDTTST-------TSYSL----- 101
Query: 326 LLQQGQRPNALIYQDNGNSLLWDV-EDQKQRFLNPSGFTSNLCSF 369
Q Q QDNG+ L+ V E ++Q LN F +N+CSF
Sbjct: 102 ---QSQHGAISFSQDNGSYLMQAVGEPRQQEMLNQLVF-NNMCSF 142
>gi|297825371|ref|XP_002880568.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326407|gb|EFH56827.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKVRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|449440508|ref|XP_004138026.1| PREDICTED: uncharacterized protein LOC101208544 [Cucumis sativus]
gi|449501436|ref|XP_004161366.1| PREDICTED: uncharacterized LOC101208544 [Cucumis sativus]
Length = 135
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/72 (66%), Positives = 55/72 (76%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK+LQ LVPGC KVTGKA MLDEIINYVQ LQNQVEFLSMKLAS++P+ +DFGMD
Sbjct: 1 MKVLQTLVPGCHKVTGKALMLDEIINYVQSLQNQVEFLSMKLASLDPVLHDFGMDFPEVL 60
Query: 269 MVRPDDQQNLNS 280
+V + LN
Sbjct: 61 LVGTPASEILNG 72
>gi|20127072|gb|AAM10955.1|AF488599_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 350
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 190 VEFLQLQVKVLSM 202
>gi|51970922|dbj|BAD44153.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
Length = 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|15224109|ref|NP_180003.1| transcription factor bHLH66 [Arabidopsis thaliana]
gi|75315918|sp|Q9ZUG9.1|BH066_ARATH RecName: Full=Transcription factor bHLH66; AltName: Full=Basic
helix-loop-helix protein 66; Short=AtbHLH66; Short=bHLH
66; AltName: Full=Transcription factor EN 95; AltName:
Full=bHLH transcription factor bHLH066
gi|4115386|gb|AAD03387.1| unknown protein [Arabidopsis thaliana]
gi|51970882|dbj|BAD44133.1| putative bHLH transcription factor (bHLH066) [Arabidopsis thaliana]
gi|111074492|gb|ABH04619.1| At2g24260 [Arabidopsis thaliana]
gi|330252457|gb|AEC07551.1| transcription factor bHLH66 [Arabidopsis thaliana]
Length = 350
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ +RARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 131 PPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDY 189
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 190 VKFLQLQVKVLSM 202
>gi|414589493|tpg|DAA40064.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 471
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEI++Y
Sbjct: 235 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 291
Query: 236 VQFLQNQVEFLSM----KLASVNPMFYDF 260
V+FLQ QV+ LSM A+V P+ D
Sbjct: 292 VKFLQLQVKVLSMSRLGGAAAVAPLVADM 320
>gi|226496023|ref|NP_001141950.1| uncharacterized protein LOC100274099 [Zea mays]
gi|223945379|gb|ACN26773.1| unknown [Zea mays]
gi|414589494|tpg|DAA40065.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 470
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 66/89 (74%), Gaps = 7/89 (7%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEI++Y
Sbjct: 234 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIVDY 290
Query: 236 VQFLQNQVEFLSM----KLASVNPMFYDF 260
V+FLQ QV+ LSM A+V P+ D
Sbjct: 291 VKFLQLQVKVLSMSRLGGAAAVAPLVADM 319
>gi|295913203|gb|ADG57860.1| transcription factor [Lycoris longituba]
Length = 204
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII YV+FLQ
Sbjct: 29 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIGYVKFLQL 87
Query: 242 QVEFLSMK----LASVNPMFYDFGMDLDN 266
QV+ LSM A+V P+ D ++ N
Sbjct: 88 QVKVLSMSRLGGAAAVAPLVADISSEVRN 116
>gi|297743632|emb|CBI36515.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 65/89 (73%), Gaps = 5/89 (5%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 97 PAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDY 155
Query: 236 VQFLQNQVEFLSM----KLASVNPMFYDF 260
V+FLQ QV+ LSM A+V P+ D
Sbjct: 156 VKFLQLQVKVLSMSRLGGAAAVAPLVADM 184
>gi|147818198|emb|CAN60403.1| hypothetical protein VITISV_034133 [Vitis vinifera]
Length = 484
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 39/191 (20%)
Query: 79 NEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD 138
N P N L K+ + A S Q+++ + + K+RK+ + N+++S D
Sbjct: 150 NFPPNKEGLTEKSLNGAQSQEGHQISEGDAVDASPS---GKRRKSSFDPRPPLNTSKSAD 206
Query: 139 PREVKSKKQKKGNVNDAKKEEKEN-----SPKADSEQ--KVAKE-------PPKDYIHVR 184
+ K + + ++E+K+ SP +Q K AK+ P ++YIHVR
Sbjct: 207 GEQPKGLPWENSEFSKEQEEKKQKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVR 266
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARRGQAT+SHSLAER+ TGKA MLDEIINYVQ LQ QVE
Sbjct: 267 ARRGQATNSHSLAERI----------------------TGKAVMLDEIINYVQSLQQQVE 304
Query: 245 FLSMKLASVNP 255
FLSMKLA+VNP
Sbjct: 305 FLSMKLATVNP 315
>gi|356564915|ref|XP_003550692.1| PREDICTED: transcription factor bHLH69-like [Glycine max]
Length = 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/85 (62%), Positives = 65/85 (76%), Gaps = 5/85 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 197 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 255
Query: 243 VEFLSMK----LASVNPMFYDFGMD 263
V+ LSM A+V P+ + G D
Sbjct: 256 VKVLSMSRLGGAAAVAPLVAEGGGD 280
>gi|449530006|ref|XP_004171988.1| PREDICTED: transcription factor UNE12-like, partial [Cucumis
sativus]
Length = 219
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP C+K T +A MLDEI++
Sbjct: 50 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVD 108
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 109 YVKFLRLQVKVLSM 122
>gi|356556714|ref|XP_003546668.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 475
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 253 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 311
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 312 VKVLSMSRLGGAAAVAPLVADM 333
>gi|449457905|ref|XP_004146688.1| PREDICTED: uncharacterized protein LOC101211609 [Cucumis sativus]
gi|449529094|ref|XP_004171536.1| PREDICTED: uncharacterized protein LOC101228749 [Cucumis sativus]
Length = 422
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 204 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 262
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 263 VKVLSMSRLGGAAAVAPLVADV 284
>gi|356530637|ref|XP_003533887.1| PREDICTED: transcription factor bHLH66-like [Glycine max]
Length = 452
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 225 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 283
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 284 VKVLSMSRLGGAAAVAPLVADM 305
>gi|93280154|gb|ABF06705.1| Joka8 [Nicotiana plumbaginifolia]
Length = 360
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 247 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 305
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 306 VKVLSMSRLGGAAAVAPLVADM 327
>gi|449435746|ref|XP_004135655.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 318
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 62/74 (83%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP C+K T +A MLDEI++
Sbjct: 149 QPPQVRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSCNK-TDRAAMLDEIVD 207
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 208 YVKFLRLQVKVLSM 221
>gi|227345480|gb|ACP28172.1| roothairless1/slippery [Lotus japonicus]
Length = 386
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 174 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 232
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 233 VKVLSMSRLGGAAAVAPLVADI 254
>gi|413968544|gb|AFW90609.1| basic helix-loop-helix protein BHLH3 [Solanum tuberosum]
Length = 303
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP C+K T +A MLDEI++
Sbjct: 133 QPPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILD 191
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 192 YVKFLRLQVKVLSM 205
>gi|357480125|ref|XP_003610348.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511403|gb|AES92545.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 400
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 196 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 254
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 255 VKVLSMSRLGGAGAVAPLVADM 276
>gi|357480123|ref|XP_003610347.1| Transcription factor bHLH66 [Medicago truncatula]
gi|355511402|gb|AES92544.1| Transcription factor bHLH66 [Medicago truncatula]
Length = 403
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/82 (62%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 199 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQVQ 257
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 258 VKVLSMSRLGGAGAVAPLVADM 279
>gi|302809450|ref|XP_002986418.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
gi|300145954|gb|EFJ12627.1| hypothetical protein SELMODRAFT_425336 [Selaginella moellendorffii]
Length = 355
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 136 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 194
Query: 243 VEFLSMKL-----ASVNPMFYDF 260
V+ LSM A++ P+ D
Sbjct: 195 VKVLSMSRLGGAGATMAPLVADL 217
>gi|77999289|gb|ABB16991.1| unknown [Solanum tuberosum]
Length = 304
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP C+K T +A MLDEI++Y
Sbjct: 135 PPSIRPRVRARRGQATDPHSIAERLRRERISERIKALQELVPSCNK-TDRAAMLDEILDY 193
Query: 236 VQFLQNQVEFLSM 248
V+FL+ QV+ LSM
Sbjct: 194 VKFLRLQVKVLSM 206
>gi|357118504|ref|XP_003560994.1| PREDICTED: transcription factor bHLH66-like [Brachypodium
distachyon]
Length = 388
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 177 PPRQ-TRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 234
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 235 VKFLQLQVKVLSM 247
>gi|147836162|emb|CAN75431.1| hypothetical protein VITISV_021146 [Vitis vinifera]
Length = 486
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 64/93 (68%), Gaps = 5/93 (5%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
P + VRARRGQAT HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 249 AGGAPAQPRQRVRARRGQATHPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDE 307
Query: 232 IINYVQFLQNQVEFLSMK----LASVNPMFYDF 260
II+YV+FLQ QV+ LSM A+V P+ D
Sbjct: 308 IIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADM 340
>gi|168048453|ref|XP_001776681.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671973|gb|EDQ58517.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 233
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ
Sbjct: 31 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 89
Query: 242 QVEFLSM 248
QV+ LSM
Sbjct: 90 QVKVLSM 96
>gi|168043431|ref|XP_001774188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674456|gb|EDQ60964.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ
Sbjct: 30 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNSNK-TDKASMLDEIIDYVKFLQL 88
Query: 242 QVEFLSM 248
QV+ LSM
Sbjct: 89 QVKVLSM 95
>gi|226496235|ref|NP_001140213.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|194698524|gb|ACF83346.1| unknown [Zea mays]
gi|195636992|gb|ACG37964.1| BHLH transcription factor [Zea mays]
gi|414883773|tpg|DAA59787.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
E +A +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A
Sbjct: 101 GEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAA 159
Query: 228 MLDEIINYVQFLQNQVEFLSM 248
MLDEI++YV+FL+ QV+ LSM
Sbjct: 160 MLDEILDYVKFLRLQVKVLSM 180
>gi|357137415|ref|XP_003570296.1| PREDICTED: uncharacterized protein LOC100827783 [Brachypodium
distachyon]
Length = 351
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQVQ 202
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|242047606|ref|XP_002461549.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
gi|241924926|gb|EER98070.1| hypothetical protein SORBIDRAFT_02g004570 [Sorghum bicolor]
Length = 277
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
E +A +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A
Sbjct: 100 GEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAA 158
Query: 228 MLDEIINYVQFLQNQVEFLSM 248
MLDEI++YV+FL+ QV+ LSM
Sbjct: 159 MLDEILDYVKFLRLQVKVLSM 179
>gi|242037799|ref|XP_002466294.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
gi|241920148|gb|EER93292.1| hypothetical protein SORBIDRAFT_01g005130 [Sorghum bicolor]
Length = 283
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 111 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAVMLDE 169
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LSM
Sbjct: 170 ILDYVKFLRLQVKVLSM 186
>gi|295913612|gb|ADG58051.1| transcription factor [Lycoris longituba]
Length = 95
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/58 (81%), Positives = 51/58 (87%)
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
ERVRRE+I ERMK LQ LVPGC+K+TGKA ML+EIINYVQ LQ QVEFLSMKLA VNP
Sbjct: 3 ERVRRERIGERMKYLQGLVPGCNKITGKAGMLEEIINYVQSLQRQVEFLSMKLAGVNP 60
>gi|55773907|dbj|BAD72512.1| bHLH transcription factor PTF1-like [Oryza sativa Japonica Group]
Length = 420
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|218197712|gb|EEC80139.1| hypothetical protein OsI_21931 [Oryza sativa Indica Group]
Length = 420
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 60/73 (82%), Gaps = 2/73 (2%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+Y
Sbjct: 198 PPRQQ-RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDY 255
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV+ LSM
Sbjct: 256 VKFLQLQVKVLSM 268
>gi|20127075|gb|AAM10956.1|AF488601_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 182
Query: 237 QFLQNQVEFLSM 248
+FLQ QV+ LSM
Sbjct: 183 KFLQLQVKVLSM 194
>gi|226495509|ref|NP_001152044.1| LOC100285681 [Zea mays]
gi|195652123|gb|ACG45529.1| BHLH transcription factor [Zea mays]
gi|413932798|gb|AFW67349.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 285
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 113 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 171
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LSM
Sbjct: 172 ILDYVKFLRLQVKVLSM 188
>gi|30688869|ref|NP_194827.2| transcription factor bHLH69 [Arabidopsis thaliana]
gi|218563529|sp|Q8S3D5.2|BH069_ARATH RecName: Full=Transcription factor bHLH69; AltName: Full=Basic
helix-loop-helix protein 69; Short=AtbHLH69; Short=bHLH
69; AltName: Full=Transcription factor EN 94; AltName:
Full=bHLH transcription factor bHLH069
gi|225898837|dbj|BAH30549.1| hypothetical protein [Arabidopsis thaliana]
gi|332660437|gb|AEE85837.1| transcription factor bHLH69 [Arabidopsis thaliana]
Length = 310
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV
Sbjct: 124 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 182
Query: 237 QFLQNQVEFLSM 248
+FLQ QV+ LSM
Sbjct: 183 KFLQLQVKVLSM 194
>gi|194696204|gb|ACF82186.1| unknown [Zea mays]
gi|414883772|tpg|DAA59786.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 193
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
E +A +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A
Sbjct: 9 GEGGMAPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAA 67
Query: 228 MLDEIINYVQFLQNQVEFLSM 248
MLDEI++YV+FL+ QV+ LSM
Sbjct: 68 MLDEILDYVKFLRLQVKVLSM 88
>gi|2980768|emb|CAA18195.1| putative protein [Arabidopsis thaliana]
gi|7270000|emb|CAB79816.1| putative protein [Arabidopsis thaliana]
Length = 367
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV
Sbjct: 181 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 239
Query: 237 QFLQNQVEFLSM 248
+FLQ QV+ LSM
Sbjct: 240 KFLQLQVKVLSM 251
>gi|297798868|ref|XP_002867318.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297313154|gb|EFH43577.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 59/72 (81%), Gaps = 1/72 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV
Sbjct: 122 PQTKPKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYV 180
Query: 237 QFLQNQVEFLSM 248
+FLQ QV+ LSM
Sbjct: 181 KFLQLQVKVLSM 192
>gi|3540186|gb|AAC34336.1| Hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 77/133 (57%), Gaps = 33/133 (24%)
Query: 137 KDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKD-YIHVRARRGQATDSHS 195
+DP+ + QKK + ND KE + E ++E PK+ YIH+RARRGQAT+SHS
Sbjct: 166 EDPQRGNDQSQKK-HKNDQSKE------TVNKESSQSEEAPKENYIHMRARRGQATNSHS 218
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
LAER+ TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 219 LAERI----------------------TGKAVMLDEIINYVQSLQQQVEFLSMKLATVNP 256
Query: 256 MFYDFGMDLDNTF 268
+ +D+D
Sbjct: 257 ---EINIDIDRIL 266
>gi|115455925|ref|NP_001051563.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|31126765|gb|AAP44685.1| unknown protein [Oryza sativa Japonica Group]
gi|108711561|gb|ABF99356.1| Lipoamide dehydrogenase, putative, expressed [Oryza sativa Japonica
Group]
gi|113550034|dbj|BAF13477.1| Os03g0797600 [Oryza sativa Japonica Group]
gi|215737529|dbj|BAG96659.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193907|gb|EEC76334.1| hypothetical protein OsI_13903 [Oryza sativa Indica Group]
Length = 294
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 122 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 180
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LSM
Sbjct: 181 ILDYVKFLRLQVKVLSM 197
>gi|255580949|ref|XP_002531293.1| conserved hypothetical protein [Ricinus communis]
gi|223529126|gb|EEF31106.1| conserved hypothetical protein [Ricinus communis]
Length = 326
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A +PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A M+DEI
Sbjct: 153 ASQPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPTANK-TDRAAMIDEI 211
Query: 233 INYVQFLQNQVEFLSM 248
++YV+FL+ QV+ LSM
Sbjct: 212 VDYVKFLRLQVKVLSM 227
>gi|449443257|ref|XP_004139396.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
gi|449523179|ref|XP_004168602.1| PREDICTED: transcription factor bHLH66-like [Cucumis sativus]
Length = 421
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%), Gaps = 1/67 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ
Sbjct: 216 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQL 274
Query: 242 QVEFLSM 248
QV+ LS+
Sbjct: 275 QVKVLSV 281
>gi|222625964|gb|EEE60096.1| hypothetical protein OsJ_12958 [Oryza sativa Japonica Group]
Length = 294
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 122 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 180
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LSM
Sbjct: 181 ILDYVKFLRLQVKVLSM 197
>gi|359484248|ref|XP_002277344.2| PREDICTED: uncharacterized protein LOC100257707 [Vitis vinifera]
Length = 536
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII YV+FLQ
Sbjct: 295 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 353
Query: 242 QVEFLSM-KLA---SVNPMFYD 259
QV+ LSM +L +V P+ D
Sbjct: 354 QVKVLSMSRLGAAEAVVPLITD 375
>gi|46390356|dbj|BAD15821.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
gi|215768923|dbj|BAH01152.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623080|gb|EEE57212.1| hypothetical protein OsJ_07173 [Oryza sativa Japonica Group]
Length = 524
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 11/123 (8%)
Query: 129 SSFNSAQS-KDPREVKSKKQKKGN--VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRA 185
+SFN+ QS + P E K VN + E PK + PK VRA
Sbjct: 264 ASFNATQSHRQPAEACGGKNGGAAPFVNLS-----EVLPKGNGSGSAGNGAPKP--RVRA 316
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RRGQATD HS+AER+RREKIS+RMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+
Sbjct: 317 RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQVKV 375
Query: 246 LSM 248
LSM
Sbjct: 376 LSM 378
>gi|147771925|emb|CAN66761.1| hypothetical protein VITISV_032727 [Vitis vinifera]
Length = 337
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI
Sbjct: 165 APHPPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSSNK-TDRAAMLDEI 223
Query: 233 INYVQFLQNQVEFLSM 248
++YV+FL+ QV+ LSM
Sbjct: 224 VDYVKFLRLQVKVLSM 239
>gi|15242922|ref|NP_200609.1| transcription factor bHLH82 [Arabidopsis thaliana]
gi|75311535|sp|Q9LSQ3.1|BH082_ARATH RecName: Full=Transcription factor bHLH82; AltName: Full=Basic
helix-loop-helix protein 82; Short=AtbHLH82; Short=bHLH
82; AltName: Full=Transcription factor EN 96; AltName:
Full=bHLH transcription factor bHLH082
gi|8885595|dbj|BAA97525.1| unnamed protein product [Arabidopsis thaliana]
gi|332009604|gb|AED96987.1| transcription factor bHLH82 [Arabidopsis thaliana]
Length = 297
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/88 (60%), Positives = 64/88 (72%), Gaps = 9/88 (10%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V ++ P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 92 VVRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDE 146
Query: 232 IINYVQFLQNQVEFLSMK----LASVNP 255
II YV+FLQ QV+ LSM SV P
Sbjct: 147 IIEYVRFLQLQVKVLSMSRLGGAGSVGP 174
>gi|125539931|gb|EAY86326.1| hypothetical protein OsI_07700 [Oryza sativa Indica Group]
Length = 524
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 11/123 (8%)
Query: 129 SSFNSAQS-KDPREVKSKKQKKGN--VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRA 185
+SFN+ QS + P E K VN + E PK + PK VRA
Sbjct: 264 ASFNATQSHRQPAEACGGKNGGAAPFVNLS-----EVLPKGNGSGSAGNGAPKP--RVRA 316
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RRGQATD HS+AER+RREKIS+RMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+
Sbjct: 317 RRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYVKFLQLQVKV 375
Query: 246 LSM 248
LSM
Sbjct: 376 LSM 378
>gi|224131266|ref|XP_002328496.1| predicted protein [Populus trichocarpa]
gi|222838211|gb|EEE76576.1| predicted protein [Populus trichocarpa]
Length = 182
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP C+K T +A MLDEI++
Sbjct: 12 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVD 70
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 71 YVKFLRLQVKVLSM 84
>gi|297796719|ref|XP_002866244.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297312079|gb|EFH42503.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V ++ P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDE
Sbjct: 92 VVRQKPR----VRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDE 146
Query: 232 IINYVQFLQNQVEFLSM 248
II YV+FLQ QV+ LSM
Sbjct: 147 IIEYVRFLQLQVKVLSM 163
>gi|224068580|ref|XP_002326150.1| predicted protein [Populus trichocarpa]
gi|222833343|gb|EEE71820.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 76/125 (60%), Gaps = 18/125 (14%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRG ATD HS+AER+RREKI+ERMK LQ+LVP +KV KA MLDEII YV+FLQ
Sbjct: 239 RVRARRGHATDPHSIAERLRREKIAERMKNLQELVPNSNKVD-KASMLDEIIEYVKFLQL 297
Query: 242 QVEFLSMK----LASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTA 297
QV+ LSM +V P+ D +P+ NS+ + ++ + SP+A
Sbjct: 298 QVKVLSMSRLGAAGAVIPLLTDG----------QPEGH---NSLSLSPSAGLGIDISPSA 344
Query: 298 QLTAF 302
AF
Sbjct: 345 DQIAF 349
>gi|359487888|ref|XP_002274833.2| PREDICTED: transcription factor UNE12-like [Vitis vinifera]
Length = 331
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++Y
Sbjct: 162 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDY 220
Query: 236 VQFLQNQVEFLSM 248
V+FL+ QV+ LSM
Sbjct: 221 VKFLRLQVKVLSM 233
>gi|298204851|emb|CBI34158.3| unnamed protein product [Vitis vinifera]
Length = 261
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/73 (64%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++Y
Sbjct: 92 PPAIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSANK-TDRAAMLDEIVDY 150
Query: 236 VQFLQNQVEFLSM 248
V+FL+ QV+ LSM
Sbjct: 151 VKFLRLQVKVLSM 163
>gi|297738502|emb|CBI27747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/82 (64%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K T KA MLDEII YV+FLQ
Sbjct: 148 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSNK-TDKASMLDEIIEYVKFLQL 206
Query: 242 QVEFLSM-KLA---SVNPMFYD 259
QV+ LSM +L +V P+ D
Sbjct: 207 QVKVLSMSRLGAAEAVVPLITD 228
>gi|255550301|ref|XP_002516201.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
gi|223544687|gb|EEF46203.1| DNA-directed RNA polymerase beta chain, putative [Ricinus communis]
Length = 592
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 60/82 (73%), Gaps = 5/82 (6%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP KV KA MLDEII YV+FLQ
Sbjct: 350 RVRARRGQATDPHSIAERLRREKIAERMKNLQELVPNSSKVD-KASMLDEIIEYVKFLQL 408
Query: 242 QVEFLSMK----LASVNPMFYD 259
QV+ LSM +V P+ D
Sbjct: 409 QVKVLSMSRLGATGAVIPLITD 430
>gi|356576702|ref|XP_003556469.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 331
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++
Sbjct: 161 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 219
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 220 YVKFLRLQVKVLSM 233
>gi|356535169|ref|XP_003536121.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 328
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/74 (63%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T +A MLDEI++
Sbjct: 158 QPPGIRPRVRARRGQATDPHSIAERLRRERIAERMKALQELVPSINK-TDRAAMLDEIVD 216
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 217 YVKFLRLQVKVLSM 230
>gi|224123420|ref|XP_002319074.1| predicted protein [Populus trichocarpa]
gi|222857450|gb|EEE94997.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP VRARRGQATD HS+AER+RR +I+ER+K LQ+LVP C+K T +A MLDEI++
Sbjct: 8 QPPGIRPRVRARRGQATDPHSIAERLRRVRITERVKALQELVPTCNK-TDRAAMLDEIVD 66
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ Q++ LSM
Sbjct: 67 YVKFLRLQIKVLSM 80
>gi|323388949|gb|ADX60279.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 294
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V +PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDE
Sbjct: 122 VGPQPPAPRPKVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDE 180
Query: 232 IINYVQFLQNQVEFLSM 248
I++YV+FL+ QV+ LS+
Sbjct: 181 ILDYVKFLRLQVKVLSI 197
>gi|302764076|ref|XP_002965459.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
gi|302825088|ref|XP_002994179.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300137980|gb|EFJ04769.1| hypothetical protein SELMODRAFT_24890 [Selaginella moellendorffii]
gi|300166273|gb|EFJ32879.1| hypothetical protein SELMODRAFT_24892 [Selaginella moellendorffii]
Length = 143
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RRE+I+ERMK LQ LVP +K T KA MLDEI++YV+FLQ
Sbjct: 3 RVRARRGQATDPHSIAERLRRERIAERMKALQDLVPNANK-TDKASMLDEIVDYVKFLQL 61
Query: 242 QVEFLSM 248
QV+ LSM
Sbjct: 62 QVKVLSM 68
>gi|147797633|emb|CAN71939.1| hypothetical protein VITISV_038910 [Vitis vinifera]
Length = 381
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 82/156 (52%), Gaps = 36/156 (23%)
Query: 111 TATTTRMDKKRKNRTNASSSF------NSAQSKDP-----REVKSKKQKKGNVNDAKKEE 159
T + ++KKRK + S F +AQ KD E K K ++K N+ K
Sbjct: 166 TMELSPIEKKRKRLADDRSQFAHLKNMEAAQPKDECLGRQDERKQKAEQKIVANNCGKLI 225
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
E + + + P +DYIHVRA+RGQAT+SHSLAER+
Sbjct: 226 GE---EVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLAERI------------------- 263
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
TGKA MLDEIINYVQ LQ QVEFLSMKLA+V P
Sbjct: 264 ---TGKAVMLDEIINYVQSLQRQVEFLSMKLATVYP 296
>gi|242095026|ref|XP_002438003.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
gi|241916226|gb|EER89370.1| hypothetical protein SORBIDRAFT_10g006250 [Sorghum bicolor]
Length = 489
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII+YV+FLQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKSLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|125554388|gb|EAY99993.1| hypothetical protein OsI_21996 [Oryza sativa Indica Group]
Length = 477
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 316 RARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQV 374
Query: 244 EFLSM 248
+ LSM
Sbjct: 375 KVLSM 379
>gi|413937342|gb|AFW71893.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 489
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/67 (71%), Positives = 56/67 (83%), Gaps = 1/67 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP ++ T KA MLDEII YV+FLQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 242 QVEFLSM 248
QV+ LSM
Sbjct: 356 QVKVLSM 362
>gi|194396125|gb|ACF60480.1| bHLH transcription factor [Oryza sativa Japonica Group]
Length = 478
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 375
Query: 244 EFLSM 248
+ LSM
Sbjct: 376 KVLSM 380
>gi|115466888|ref|NP_001057043.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|51090797|dbj|BAD35275.1| bHLH transcription factor PTF1 [Oryza sativa Japonica Group]
gi|113595083|dbj|BAF18957.1| Os06g0193400 [Oryza sativa Japonica Group]
gi|125596339|gb|EAZ36119.1| hypothetical protein OsJ_20430 [Oryza sativa Japonica Group]
gi|215686762|dbj|BAG89612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 478
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 375
Query: 244 EFLSM 248
+ LSM
Sbjct: 376 KVLSM 380
>gi|29424047|gb|AAO73566.1| bHLH transcription factor PTF1 [Oryza sativa]
Length = 478
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 317 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 375
Query: 244 EFLSM 248
+ LSM
Sbjct: 376 KVLSM 380
>gi|413968542|gb|AFW90608.1| beta-fructofuranosidase protein [Solanum tuberosum]
Length = 298
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 60/72 (83%), Gaps = 1/72 (1%)
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P + VRARRGQATD HS+AER+RRE+ISER+K LQ+LVP C+K T +A ++DEI++YV
Sbjct: 128 PAIHPRVRARRGQATDPHSIAERLRRERISERIKALQELVPNCNK-TDRAALVDEILDYV 186
Query: 237 QFLQNQVEFLSM 248
+FL+ QV+ LSM
Sbjct: 187 KFLRLQVKVLSM 198
>gi|162460249|ref|NP_001105867.1| bHLH transcription factor PTF1 [Zea mays]
gi|93359745|gb|ABF13333.1| bHLH transcription factor PTF1 [Zea mays]
Length = 481
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII+YV+FLQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|195616290|gb|ACG29975.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 481
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII+YV+FLQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 378
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|51090798|dbj|BAD35276.1| putative bHLH transcription factor PTF1 [Oryza sativa Japonica
Group]
Length = 401
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ LVP +K KA MLDEII+YV+FLQ QV
Sbjct: 240 RARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNKAD-KASMLDEIIDYVKFLQLQV 298
Query: 244 EFLSM 248
+ LSM
Sbjct: 299 KVLSM 303
>gi|222641577|gb|EEE69709.1| hypothetical protein OsJ_29376 [Oryza sativa Japonica Group]
Length = 410
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/82 (63%), Positives = 62/82 (75%), Gaps = 7/82 (8%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 308
Query: 243 VEFLSMK----LASVNPMFYDF 260
V LSM A+V P+ D
Sbjct: 309 V--LSMSRLGGAAAVAPLVADM 328
>gi|413943961|gb|AFW76610.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 473
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII+YV+FLQ Q
Sbjct: 317 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 375
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 376 VKVLSM 381
>gi|223702396|gb|ACN21629.1| putative basic helix-loop-helix protein BHLH2 [Lotus japonicus]
gi|388506732|gb|AFK41432.1| unknown [Lotus japonicus]
Length = 342
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+ PP VRARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K + +A MLDEI+
Sbjct: 171 QHPPGIRPRVRARRGQATDPHSIAERLRRERIAERMRALQELVPSINK-SDRAAMLDEIV 229
Query: 234 NYVQFLQNQVEFLSM 248
+YV+FL+ QV+ LSM
Sbjct: 230 DYVKFLRLQVKVLSM 244
>gi|226492543|ref|NP_001151181.1| LOC100284814 [Zea mays]
gi|195644858|gb|ACG41897.1| BHLH transcription factor [Zea mays]
Length = 390
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV
Sbjct: 189 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 247
Query: 244 EFLSM 248
+ LSM
Sbjct: 248 KVLSM 252
>gi|212724016|ref|NP_001131264.1| uncharacterized protein LOC100192577 [Zea mays]
gi|194691028|gb|ACF79598.1| unknown [Zea mays]
gi|323388613|gb|ADX60111.1| bHLH transcription factor [Zea mays]
Length = 438
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII+YV+FLQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDYVKFLQLQ 340
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 341 VKVLSM 346
>gi|242063376|ref|XP_002452977.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
gi|241932808|gb|EES05953.1| hypothetical protein SORBIDRAFT_04g035890 [Sorghum bicolor]
Length = 393
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV
Sbjct: 196 RAKRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 254
Query: 244 EFLSM 248
+ LSM
Sbjct: 255 KVLSM 259
>gi|357124947|ref|XP_003564158.1| PREDICTED: uncharacterized protein LOC100841109 [Brachypodium
distachyon]
Length = 482
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/65 (72%), Positives = 55/65 (84%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRGQATD HS+AER+RREKISERMK LQ+LVP +K K+ MLDEII+YV+FLQ QV
Sbjct: 322 RARRGQATDPHSIAERLRREKISERMKNLQELVPNSNKAD-KSSMLDEIIDYVKFLQLQV 380
Query: 244 EFLSM 248
+ LSM
Sbjct: 381 KVLSM 385
>gi|225456606|ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
Length = 262
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 73/134 (54%), Gaps = 31/134 (23%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADS----EQKVAKEPPKDY 180
T++ S N++ K + K + + N K E E S A E K A++ +DY
Sbjct: 100 TSSGSGMNASNGK-----RMKISRTPDENGGSKAELEASSVAGEKPAEESKPAEQSKQDY 154
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
IHVRARRGQATDSHSLAER V GKA +LDEIINY+Q LQ
Sbjct: 155 IHVRARRGQATDSHSLAER----------------------VIGKALVLDEIINYIQSLQ 192
Query: 241 NQVEFLSMKLASVN 254
QVEFLSMKL +VN
Sbjct: 193 RQVEFLSMKLEAVN 206
>gi|326498007|dbj|BAJ94866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 481
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RARRGQATD HS+AER+RREKISERMK LQ LVP +K K+ MLDEII+YV+FLQ Q
Sbjct: 320 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKAD-KSSMLDEIIDYVKFLQLQ 378
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|413952903|gb|AFW85552.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/65 (70%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV
Sbjct: 195 RAKRGQATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVRFLQLQV 253
Query: 244 EFLSM 248
+ LSM
Sbjct: 254 KVLSM 258
>gi|357153670|ref|XP_003576528.1| PREDICTED: uncharacterized protein LOC100826168 [Brachypodium
distachyon]
Length = 458
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/88 (59%), Positives = 63/88 (71%), Gaps = 10/88 (11%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV--TGKAFMLDEIINYVQFLQ 240
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ
Sbjct: 238 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKWMQTDKASMLDEIIDYVKFLQ 297
Query: 241 NQVE----FLSM----KLASVNPMFYDF 260
QV+ LSM A+V P+ D
Sbjct: 298 LQVKASMHVLSMSRLGGAAAVAPLVADM 325
>gi|225445889|ref|XP_002276403.1| PREDICTED: uncharacterized protein LOC100243222 [Vitis vinifera]
Length = 519
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 18/114 (15%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV-----TGKA 226
P + VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +KV T KA
Sbjct: 274 AGGAPAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKVIHPTLTDKA 333
Query: 227 FMLDEIINYVQFLQNQ---------VEFLSMK----LASVNPMFYDFGMDLDNT 267
MLDEII+YV+FLQ Q V+ LSM A+V P+ D + T
Sbjct: 334 SMLDEIIDYVKFLQLQVKVFLTVVVVQVLSMSRLGGAAAVAPLVADMSSEASGT 387
>gi|194688984|gb|ACF78576.1| unknown [Zea mays]
gi|238014612|gb|ACR38341.1| unknown [Zea mays]
gi|413952840|gb|AFW85489.1| pi starvation-induced transcription factor1 [Zea mays]
Length = 481
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ LVP +K KA MLDEII++V+FLQ Q
Sbjct: 320 VRARRGQATDPHSIAERLRREKISDRMKNLQDLVPNSNKAD-KASMLDEIIDHVKFLQLQ 378
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 379 VKVLSM 384
>gi|218202150|gb|EEC84577.1| hypothetical protein OsI_31377 [Oryza sativa Indica Group]
Length = 414
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 63/92 (68%), Gaps = 15/92 (16%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ Q
Sbjct: 159 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQ 217
Query: 243 VE----------FLSMK----LASVNPMFYDF 260
V+ LSM A+V P+ D
Sbjct: 218 VKASTYTKLLIHVLSMSRLGGAAAVAPLVADM 249
>gi|297726953|ref|NP_001175840.1| Os09g0417400 [Oryza sativa Japonica Group]
gi|50253024|dbj|BAD29274.1| bHLH transcription factor PTF1-like protein [Oryza sativa Japonica
Group]
gi|255678901|dbj|BAH94568.1| Os09g0417400 [Oryza sativa Japonica Group]
Length = 499
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 64/94 (68%), Gaps = 16/94 (17%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV--TGKAFMLDEIINYVQFLQ 240
VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K+ T KA MLDEII+YV+FLQ
Sbjct: 250 VRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFLQ 309
Query: 241 NQVE----------FLSMK----LASVNPMFYDF 260
QV+ LSM A+V P+ D
Sbjct: 310 LQVKASTYTKLLIHVLSMSRLGGAAAVAPLVADM 343
>gi|357119229|ref|XP_003561348.1| PREDICTED: transcription factor UNE12-like [Brachypodium
distachyon]
Length = 288
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP RARRGQATD HS+AER+RRE+I+ERM+ LQ+LVP +K T +A MLDEI++
Sbjct: 118 QPPAPRPKQRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILD 176
Query: 235 YVQFLQNQVEFLSM 248
YV+FL+ QV+ LSM
Sbjct: 177 YVKFLRLQVKVLSM 190
>gi|115345831|gb|ABI95371.1| PTF1 [Triticum aestivum]
Length = 480
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RARRGQATD HS+AER+RREKISERMK LQ LVP +K K+ MLDEII+YV+FLQ Q
Sbjct: 319 ARARRGQATDPHSIAERLRREKISERMKNLQDLVPNSNKAD-KSSMLDEIIDYVKFLQLQ 377
Query: 243 VEFLSM 248
V+ L M
Sbjct: 378 VKVLCM 383
>gi|222636553|gb|EEE66685.1| hypothetical protein OsJ_23336 [Oryza sativa Japonica Group]
Length = 342
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T +A MLDEI++YV+FL+ Q
Sbjct: 181 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 239
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 240 VKVLSM 245
>gi|125557459|gb|EAZ02995.1| hypothetical protein OsI_25136 [Oryza sativa Indica Group]
Length = 293
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ERM+ LQ LVP +K T +A MLDEI++YV+FL+ Q
Sbjct: 132 VRARRGQATDPHSIAERLRRERIAERMRALQDLVPNTNK-TDRAAMLDEILDYVKFLRLQ 190
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 191 VKVLSM 196
>gi|357142621|ref|XP_003572635.1| PREDICTED: uncharacterized protein LOC100834217 [Brachypodium
distachyon]
Length = 479
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 62/81 (76%), Gaps = 5/81 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP +K T KA ML+EII Y++FLQ Q
Sbjct: 282 VRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNK-TDKASMLEEIIEYIKFLQLQ 340
Query: 243 VEFLSM-KLASVN---PMFYD 259
+ LSM +L + + P+ D
Sbjct: 341 TKVLSMSRLGATDALVPLLMD 361
>gi|242049278|ref|XP_002462383.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
gi|241925760|gb|EER98904.1| hypothetical protein SORBIDRAFT_02g024750 [Sorghum bicolor]
Length = 466
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/81 (61%), Positives = 60/81 (74%), Gaps = 7/81 (8%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RGQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV
Sbjct: 240 RAWRGQATDPHSIAERLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQV 298
Query: 244 EFLSM----KLASVNPMFYDF 260
LSM A+V P+ D
Sbjct: 299 --LSMSRLGGAAAVAPLVADM 317
>gi|297728315|ref|NP_001176521.1| Os11g0442650 [Oryza sativa Japonica Group]
gi|255680061|dbj|BAH95249.1| Os11g0442650 [Oryza sativa Japonica Group]
Length = 461
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 76/160 (47%), Gaps = 44/160 (27%)
Query: 107 TVTTTATTTRM----DKKRKNRTNASSSFNSAQSKDPREVKSKKQK----KGNVNDAKKE 158
TT A R+ + + RT+ + N QS +P K+KK K D K
Sbjct: 192 AATTIAKVLRLLSAPPLQSRRRTSPETMVNFPQSPEP-GTKAKKCKLSADAAGDEDTKPV 250
Query: 159 EKENSPKADSEQKV---AKEPPKDYIHVRARRGQATDSHSLAER---------------- 199
+ + + KV A EPPKDYIHVRARRGQATDSHSLAER
Sbjct: 251 AGDAGHGGNGKGKVLDAAGEPPKDYIHVRARRGQATDSHSLAERVKAAGIDAANHNFFFS 310
Query: 200 ----------------VRREKISERMKILQKLVPGCDKVT 223
VRREKISERMK+LQ LVPGC+KV
Sbjct: 311 SILAFADAIAAVFHLQVRREKISERMKLLQDLVPGCNKVA 350
>gi|326521778|dbj|BAK00465.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 50/65 (76%), Gaps = 7/65 (10%)
Query: 176 PPK-DYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
PPK D+IHVRARRGQATDSHSLAER RREKI+ERMKILQ LVPGC+K ++ +
Sbjct: 112 PPKQDFIHVRARRGQATDSHSLAERARREKITERMKILQDLVPGCNK------LMRPWLG 165
Query: 235 YVQFL 239
Y Q +
Sbjct: 166 YWQSI 170
>gi|326533782|dbj|BAK05422.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 362
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/73 (63%), Positives = 57/73 (78%), Gaps = 5/73 (6%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LS
Sbjct: 169 GQATDPHSIAERLRRERIAERMKALQELVPSANK-TDKASMLDEIIDYVKFLQLQVKVLS 227
Query: 248 M----KLASVNPM 256
M A+V P+
Sbjct: 228 MSRLGGAAAVGPL 240
>gi|414885458|tpg|DAA61472.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 316
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
Query: 164 PKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT 223
P+A + A PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV +K T
Sbjct: 100 PQAGAAVGGAAAPPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-T 156
Query: 224 GKAFMLDEIINYVQFLQNQVEFLS 247
KA MLDEII+YV+FLQ QV +S
Sbjct: 157 DKASMLDEIIDYVKFLQLQVLSMS 180
>gi|414885459|tpg|DAA61473.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 344
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 58/73 (79%), Gaps = 5/73 (6%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LV +K T KA MLDEII+Y
Sbjct: 140 PPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVSNANK-TDKASMLDEIIDY 196
Query: 236 VQFLQNQVEFLSM 248
V+FLQ QV LSM
Sbjct: 197 VKFLQLQV--LSM 207
>gi|223948547|gb|ACN28357.1| unknown [Zea mays]
Length = 188
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK+LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKL++VNP + D++F
Sbjct: 1 MKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLSTVNPRLE---LGADDSF 57
Query: 269 MVRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADTTTAF 309
+ R DD + + +S S Q A A ++ AF
Sbjct: 58 VPR-DDANKMCAAATSSISMAQQPLPLPAAYHALEGSSPAF 97
>gi|413937341|gb|AFW71892.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 425
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRARRGQATD HS+AER+RREKIS+RMK LQ+LVP ++ T KA MLDEII YV+FLQ
Sbjct: 297 RVRARRGQATDPHSIAERLRREKISDRMKNLQELVPNSNR-TDKASMLDEIIEYVKFLQL 355
Query: 242 QVEFLSMK 249
QV+ S +
Sbjct: 356 QVKVRSPR 363
>gi|293336149|ref|NP_001169231.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
gi|223975699|gb|ACN32037.1| unknown [Zea mays]
gi|414885895|tpg|DAA61909.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 332
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 48/58 (82%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV 222
K ++ ++ +DYIHVRARRGQAT+SHSLAER+RREKISERMK+LQ LVPGC KV
Sbjct: 235 KGKGARETSESQKEDYIHVRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKV 292
>gi|326505424|dbj|BAJ95383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 199
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 74/108 (68%), Gaps = 3/108 (2%)
Query: 119 KKRKNRTNASSSFN-SAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKV--AKE 175
KKRK + + N SA SK+ + +++ + N +++ ++ SPK S++
Sbjct: 71 KKRKGTNDCIALLNPSASSKNVGDQQTEVSSQPESNSMERDNRKISPKTQSKEDSSDGDG 130
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT 223
++Y+H+RA+RGQAT+SHSLAER+RR+KISERMK+LQ LVPGC+KVT
Sbjct: 131 TKENYVHLRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCNKVT 178
>gi|302801892|ref|XP_002982702.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
gi|300149801|gb|EFJ16455.1| hypothetical protein SELMODRAFT_422025 [Selaginella moellendorffii]
Length = 443
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 248 M-KLASVNPMFYDFGMDLDNTFM 269
M +L + + D + N F+
Sbjct: 323 MSRLGNAGAVMTDLPPEDSNQFL 345
>gi|302798949|ref|XP_002981234.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
gi|300151288|gb|EFJ17935.1| hypothetical protein SELMODRAFT_444782 [Selaginella moellendorffii]
Length = 443
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 61/83 (73%), Gaps = 2/83 (2%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LS
Sbjct: 264 GQATDPHSIAERLRRERIAERMKSLQELVPNSNK-TDKASMLDEIIDYVKFLQLQVKVLS 322
Query: 248 M-KLASVNPMFYDFGMDLDNTFM 269
M +L + + D + N F+
Sbjct: 323 MSRLGNAGAVMTDLPPEDSNQFL 345
>gi|116309555|emb|CAH66617.1| OSIGBa0144C23.3 [Oryza sativa Indica Group]
Length = 157
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/61 (67%), Positives = 49/61 (80%), Gaps = 5/61 (8%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK+LQ LVPGC+K+TGKA MLDEIINYVQ LQ QVEFLSMKLA++NP +D D+ +
Sbjct: 1 MKLLQSLVPGCNKITGKALMLDEIINYVQSLQRQVEFLSMKLATMNPQ-----LDFDSHY 55
Query: 269 M 269
M
Sbjct: 56 M 56
>gi|297820582|ref|XP_002878174.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297324012|gb|EFH54433.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 439
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/44 (84%), Positives = 41/44 (93%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVT 223
Y+HVRARRGQATDSHSLAER RREKI+ RMK+LQ+LVPGCDK T
Sbjct: 201 YVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCDKGT 244
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%), Gaps = 1/42 (2%)
Query: 222 VTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
+ G A +LDEIIN+VQ LQ QVE LSM+LA+VNP DF +D
Sbjct: 303 IQGTALVLDEIINHVQSLQRQVEMLSMRLAAVNPRI-DFNLD 343
>gi|79324891|ref|NP_001031530.1| transcription factor bHLH48 [Arabidopsis thaliana]
gi|330255009|gb|AEC10103.1| transcription factor bHLH48 [Arabidopsis thaliana]
Length = 233
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/43 (83%), Positives = 41/43 (95%)
Query: 180 YIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV 222
Y+HVRARRGQATD+HSLAER RREKI+ RMK+LQ+LVPGCDKV
Sbjct: 182 YVHVRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKV 224
>gi|224101643|ref|XP_002312365.1| predicted protein [Populus trichocarpa]
gi|222852185|gb|EEE89732.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 41/47 (87%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
MK LQ LVPGC KVTGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 1 MKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNP 47
>gi|414886198|tpg|DAA62212.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 172
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
MK LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 47
>gi|414886200|tpg|DAA62214.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 161
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
MK LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 47
>gi|414886199|tpg|DAA62213.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 162
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/47 (82%), Positives = 41/47 (87%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
MK LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP
Sbjct: 1 MKFLQDLVPGCNKVVGKALMLDEIINYVQSLQQQVEFLSMKLATVNP 47
>gi|414865639|tpg|DAA44196.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 201
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 47/57 (82%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV 222
AD + A+ +DY+HVRA+RGQAT+SHSLAER RREKI+ERMK+LQ LVPGC+K
Sbjct: 137 ADEKAGDARAKREDYVHVRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKA 193
>gi|224077848|ref|XP_002305434.1| predicted protein [Populus trichocarpa]
gi|222848398|gb|EEE85945.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%), Gaps = 3/60 (5%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTF 268
MK LQ LVPGC+ +TGKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF ++DN F
Sbjct: 1 MKYLQDLVPGCNNITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DF--NIDNLF 57
>gi|339778391|gb|AEK06077.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778393|gb|AEK06078.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778395|gb|AEK06079.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778399|gb|AEK06081.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778401|gb|AEK06082.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778405|gb|AEK06084.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778407|gb|AEK06085.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778409|gb|AEK06086.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778411|gb|AEK06087.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778413|gb|AEK06088.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778415|gb|AEK06089.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778417|gb|AEK06090.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778419|gb|AEK06091.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778421|gb|AEK06092.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778423|gb|AEK06093.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778425|gb|AEK06094.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778427|gb|AEK06095.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
gi|339778429|gb|AEK06096.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 71 DHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSS 130
D SD NC++ N A K +TE V S+V + + R
Sbjct: 229 DSKSDRNCHQ--NFGESAIKGLEDVEKTTEPLVASSSVGSGNSAER-------------- 272
Query: 131 FNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S DP E +K + ++ E+ A+ E AK+P ++RG+A
Sbjct: 273 ----PSDDPTENLKRKHRDTEESEGPSED------AEEESVGAKKPASARAGNGSKRGRA 322
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 323 AEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGA 381
Query: 251 ASVNP-MFYDFGM 262
P M GM
Sbjct: 382 GMYMPSMMLPPGM 394
>gi|339778397|gb|AEK06080.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 71 DHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSS 130
D SD NC++ N A K +TE V S+V + + R
Sbjct: 229 DSKSDRNCHQ--NFGESAIKGLEDVEKTTEPLVASSSVGSGNSAER-------------- 272
Query: 131 FNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S DP E +K + ++ E+ A+ E AK+P ++RG+A
Sbjct: 273 ----PSDDPTENLKRKHRDTEESEGPSED------AEEESVGAKKPASARAGNGSKRGRA 322
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 323 AEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGA 381
Query: 251 ASVNP-MFYDFGM 262
P M GM
Sbjct: 382 GMYMPSMMLPPGM 394
>gi|339778403|gb|AEK06083.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 71 DHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSS 130
D SD NC++ N A K +TE V S+V + + R
Sbjct: 229 DSKSDRNCHQ--NFGESAIKGLEDVEKTTEPLVASSSVGSGNSAER-------------- 272
Query: 131 FNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S DP E +K + ++ E+ A+ E AK+P ++RG+A
Sbjct: 273 ----PSDDPTENLKRKHRDTEESEGPSED------AEEESVGAKKPASARAGNGSKRGRA 322
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 323 AEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGA 381
Query: 251 ASVNP-MFYDFGM 262
P M GM
Sbjct: 382 GMYMPSMMLPPGM 394
>gi|339778389|gb|AEK06076.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 71 DHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSS 130
D SD NC++ N A K +TE V S+V + + R
Sbjct: 229 DSKSDRNCHQ--NFGESAIKGLEDVEKTTEPLVASSSVGSGNSAER-------------- 272
Query: 131 FNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S DP E +K + ++ E+ A+ E AK+P ++RG+A
Sbjct: 273 ----PSDDPTENLKRKHRDTEESEGPSED------AEEESVGAKKPASARAGNGSKRGRA 322
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 323 AEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGA 381
Query: 251 ASVNP-MFYDFGM 262
P M GM
Sbjct: 382 GMYMPSMMLPPGM 394
>gi|339778387|gb|AEK06075.1| phytochrome-interacting factor 3.1 [Populus balsamifera]
Length = 589
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 71 DHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSS 130
D SD NC++ N A K +TE V S+V + + R
Sbjct: 229 DSKSDRNCHQ--NFGESAIKGLEDVEKTTEPLVASSSVGSGNSAER-------------- 272
Query: 131 FNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S DP E +K + ++ E+ A+ E AK+P ++RG+A
Sbjct: 273 ----PSDDPTENLKRKHRDTEESEGPSED------AEEESVGAKKPASARAGNGSKRGRA 322
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 323 AEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGA 381
Query: 251 ASVNP-MFYDFGM 262
P M GM
Sbjct: 382 GIYMPSMMLPPGM 394
>gi|388493796|gb|AFK34964.1| unknown [Lotus japonicus]
gi|388513685|gb|AFK44904.1| unknown [Lotus japonicus]
Length = 180
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMD 263
MK LQ LVPGC+K+ GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF +D
Sbjct: 1 MKYLQDLVPGCNKIAGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRL-DFNID 54
>gi|168048993|ref|XP_001776949.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671650|gb|EDQ58198.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 5/85 (5%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ RA+RG AT S+AERVRR KISERMK LQ LVP DK T + MLDE + YV+ LQ
Sbjct: 381 MRTRAKRGCATHPRSIAERVRRTKISERMKKLQDLVPSMDKQTNTSDMLDETVEYVKSLQ 440
Query: 241 NQVEFLS-----MKLASVNPMFYDF 260
QV+ LS ++ A+ +F DF
Sbjct: 441 RQVQELSDTVVRLEAAAAQKIFSDF 465
>gi|242094954|ref|XP_002437967.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
gi|241916190|gb|EER89334.1| hypothetical protein SORBIDRAFT_10g005650 [Sorghum bicolor]
Length = 447
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/59 (69%), Positives = 50/59 (84%), Gaps = 1/59 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
ATD HS+AER+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LSM
Sbjct: 220 ATDPHSIAERLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 277
>gi|388517565|gb|AFK46844.1| unknown [Medicago truncatula]
Length = 194
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A MLDE + YV+FLQNQ
Sbjct: 118 IRAKRGFATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKFLQNQ 177
Query: 243 VEFLS 247
+E LS
Sbjct: 178 IEELS 182
>gi|356575289|ref|XP_003555774.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 633
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 92/183 (50%), Gaps = 9/183 (4%)
Query: 81 PSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPR 140
PS + A+K +T + T QV + T T +K ASSS S D
Sbjct: 270 PSKQSEPASKESATKIDQTPNQVLGDSGTKGQTAA---EKSMEPAVASSSVCSGTGAD-- 324
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
+ + N+ K+ ++ ++ E AK+ ++R +A + H+L+ER
Sbjct: 325 --QGSDEPNQNLKRKTKDTDDSECHSEEESAGAKKTAGGQGGAGSKRSRAAEVHNLSERR 382
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPMFYD 259
RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM + PM
Sbjct: 383 RRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGLYMPPMMLP 441
Query: 260 FGM 262
GM
Sbjct: 442 AGM 444
>gi|413951547|gb|AFW84196.1| putative HLH DNA-binding domain superfamily protein, partial [Zea
mays]
Length = 236
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
LQ LVPGC+KV GKA MLDEIINYVQ LQ QVEFLSMKLA+VNP DF
Sbjct: 121 LQDLVPGCNKVVGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQL-DF 168
>gi|223702398|gb|ACN21630.1| putative basic helix-loop-helix protein BHLH3 [Lotus japonicus]
Length = 297
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 76/121 (62%), Gaps = 5/121 (4%)
Query: 144 SKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRRE 203
S K+ + +V D + + + + A PP VRARRGQATD HS+AER+RRE
Sbjct: 96 SGKRFRDDVVDGRPKNVYHGQPMSTTMPAAPHPPAMRPRVRARRGQATDPHSIAERLRRE 155
Query: 204 KISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM----KLASVNPMFYD 259
+I+ER++ LQ+LVP +K T +A MLDEI++YV+FL+ QV+ LSM +V P+ D
Sbjct: 156 RIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTD 214
Query: 260 F 260
Sbjct: 215 I 215
>gi|356544541|ref|XP_003540708.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 415
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 337 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 396
Query: 243 VEFLS 247
VE LS
Sbjct: 397 VEALS 401
>gi|357440517|ref|XP_003590536.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479584|gb|AES60787.1| Transcription factor UNE12 [Medicago truncatula]
Length = 282
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A +PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 110 APQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 168
Query: 233 INYVQFLQNQVEFLSM----KLASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 169 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 200
>gi|449458442|ref|XP_004146956.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
gi|449503810|ref|XP_004162188.1| PREDICTED: transcription factor UNE12-like [Cucumis sativus]
Length = 316
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 8/124 (6%)
Query: 144 SKKQKKGNVNDAKKEEKEN---SPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
S K+ G V D + +N + + A PP VRARRGQATD HS+AER+
Sbjct: 112 SGKRYCGEVVDVRASSVKNVFQGQQMHAAMGAAPHPPAMRPRVRARRGQATDPHSIAERL 171
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM----KLASVNPM 256
RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+FL+ QV+ LSM +V P+
Sbjct: 172 RRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPL 230
Query: 257 FYDF 260
D
Sbjct: 231 VTDI 234
>gi|357115750|ref|XP_003559649.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 445
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 7/113 (6%)
Query: 154 DAKKEEKENSPKADSEQK----VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 209
D++ E+ SP D+E + + ++PP ARR +A + H+L+ER RR++I+E+M
Sbjct: 229 DSRTEDYSESPSEDAESESLALIERKPPLKL--PTARRSRAAEVHNLSERRRRDRINEKM 286
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGM 262
K LQ+L+P C+K T KA MLDE I Y++ LQ QV+ + M P GM
Sbjct: 287 KALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMMWMGSGMAPPAVMFPGM 338
>gi|356545930|ref|XP_003541386.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 476
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 93/170 (54%), Gaps = 12/170 (7%)
Query: 94 TAVSSTEQQVTQSTVTTTATTTRMDKKRK----NRTNASSSFNSAQSKDP--REVKSKKQ 147
T V++ E T T D R+ + T SS +S+ S +P RE + ++
Sbjct: 167 TPVATAEHAETGRARAAAGKTAVSDGGRETATCDVTVTSSPGDSSGSAEPVEREPMADRK 226
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
+KG ++ + + E+ D E AK+ + + +R +A + H+L+ER RR++I+E
Sbjct: 227 RKGREHEESEFQSED---VDFESPEAKK--QVHGSTSTKRSRAAEVHNLSERRRRDRINE 281
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
+MK LQ+L+P C+K + KA MLDE I Y++ LQ QV+ +SM V MF
Sbjct: 282 KMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQMMSMGYGMVPMMF 330
>gi|357440519|ref|XP_003590537.1| Transcription factor UNE12 [Medicago truncatula]
gi|355479585|gb|AES60788.1| Transcription factor UNE12 [Medicago truncatula]
Length = 285
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A +PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 113 APQPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 171
Query: 233 INYVQFLQNQVEFLSM----KLASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 172 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 203
>gi|224066311|ref|XP_002302077.1| predicted protein [Populus trichocarpa]
gi|222843803|gb|EEE81350.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 128 ATHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 186
Query: 233 INYVQFLQNQVEFLSM----KLASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 187 VDYVKFLRLQVKILSMSRLGGAGAVAPLVTDI 218
>gi|414871802|tpg|DAA50359.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 562
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 59 AAVFETSCGDNHDHHSDDNC--NEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTR 116
+A+ + CG N C S + S + + ++ V +
Sbjct: 198 SAIGSSICGSNQVLVQRAACAPGRASASGSGTARGDGSGSAALPSAVGSANANAVGGGRG 257
Query: 117 MDKKRKNRTN-----ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQK 171
+ R+N A+++ + + +P ++ K+ ++ E ++ S
Sbjct: 258 HEASSSGRSNYCCFGAATTTTTTTTTEPASTSNRSSKRKRLDTEDSESPSEDAESGSAAM 317
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
+A++PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE
Sbjct: 318 LARKPPQKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDE 374
Query: 232 IINYVQFLQNQVEFLSMKLASV 253
I Y++ LQ QV+ + M A +
Sbjct: 375 AIEYLKSLQLQVQMMWMGSAGI 396
>gi|226493691|ref|NP_001147809.1| PIL5 [Zea mays]
gi|195613866|gb|ACG28763.1| PIL5 [Zea mays]
Length = 539
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 10/202 (4%)
Query: 59 AAVFETSCGDNHDHHSDDNC--NEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTR 116
+A+ + CG N C S + S + + ++ V +
Sbjct: 198 SAIGSSICGSNQVLVQRAACAPGRASASGSGTARGDGSGSAALPSAVGSANANAVGGGRG 257
Query: 117 MDKKRKNRTN-----ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQK 171
+ R+N A+++ + + +P ++ K+ ++ E ++ S
Sbjct: 258 HEASSSGRSNYCCFGAATTTTTTTTTEPASTSNRSSKRKRLDTEDSESPSEDAESGSAAM 317
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
+A++PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE
Sbjct: 318 LARKPPQKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDE 374
Query: 232 IINYVQFLQNQVEFLSMKLASV 253
I Y++ LQ QV+ + M A +
Sbjct: 375 AIEYLKSLQLQVQMMWMGSAGI 396
>gi|356572238|ref|XP_003554277.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 120 APHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 178
Query: 233 INYVQFLQNQVEFLSMK----LASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 179 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 210
>gi|356504971|ref|XP_003521266.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 292
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 120 APHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 178
Query: 233 INYVQFLQNQVEFLSMK----LASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 179 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 210
>gi|356538931|ref|XP_003537954.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 418
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP DK T A MLD + Y++ LQNQ
Sbjct: 340 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVEYIKDLQNQ 399
Query: 243 VEFLS 247
V+ LS
Sbjct: 400 VQTLS 404
>gi|225437207|ref|XP_002281626.1| PREDICTED: transcription factor UNE12 [Vitis vinifera]
gi|297735488|emb|CBI17928.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 117 APHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 175
Query: 233 INYVQFLQNQVEFLSM----KLASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 176 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 207
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
gi|334184322|ref|NP_001189559.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|75299660|sp|Q8GZM7.1|PIF1_ARATH RecName: Full=Transcription factor PIF1; AltName: Full=Basic
helix-loop-helix protein 15; Short=AtbHLH15; Short=bHLH
15; AltName: Full=Protein PHY-INTERACTING FACTOR 1;
AltName: Full=Protein PHYTOCHROME INTERACTING FACTOR
3-LIKE 5; AltName: Full=Transcription factor EN 101;
AltName: Full=bHLH transcription factor bHLH015
gi|26051284|gb|AAN78308.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|28372351|dbj|BAC56979.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|330251883|gb|AEC06977.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|330251885|gb|AEC06979.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
+K NV+D K++E+E + ++E + + +R +A + H+L+ER RR++I+E
Sbjct: 243 EKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINE 302
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
RMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++ +SM
Sbjct: 303 RMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
+K NV+D K++E+E + ++E + + +R +A + H+L+ER RR++I+E
Sbjct: 243 EKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINE 302
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
RMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++ +SM
Sbjct: 303 RMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 342
>gi|255559915|ref|XP_002520976.1| DNA binding protein, putative [Ricinus communis]
gi|223539813|gb|EEF41393.1| DNA binding protein, putative [Ricinus communis]
Length = 299
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 65/92 (70%), Gaps = 5/92 (5%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 127 APHPPTMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEI 185
Query: 233 INYVQFLQNQVEFLSM----KLASVNPMFYDF 260
++YV+FL+ QV+ LSM +V P+ D
Sbjct: 186 VDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDI 217
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
gi|119935961|gb|ABM06045.1| At2g20180 [Arabidopsis thaliana]
gi|330251884|gb|AEC06978.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
+K NV+D K++E+E + ++E + + +R +A + H+L+ER RR++I+E
Sbjct: 172 EKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINE 231
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
RMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++ +SM
Sbjct: 232 RMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 407
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 148 KKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISE 207
+K NV+D K++E+E + ++E + + +R +A + H+L+ER RR++I+E
Sbjct: 172 EKTNVDDRKRKEREATTTDETESRSEETKQARVSTTSTKRSRAAEVHNLSERKRRDRINE 231
Query: 208 RMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
RMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++ +SM
Sbjct: 232 RMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQMMSM 271
>gi|357444375|ref|XP_003592465.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355481513|gb|AES62716.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 433
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP DK T + MLD + Y++ LQNQ
Sbjct: 355 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQNQ 414
Query: 243 VEFLS 247
VE LS
Sbjct: 415 VETLS 419
>gi|51090923|dbj|BAD35528.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|51090957|dbj|BAD35560.1| basic helix-loop-helix protein-like [Oryza sativa Japonica Group]
gi|215678579|dbj|BAG92234.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 154
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 48/58 (82%), Gaps = 2/58 (3%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDN 266
M++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG LDN
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG-GLDN 56
>gi|351722090|ref|NP_001236464.1| uncharacterized protein LOC100527723 [Glycine max]
gi|255633050|gb|ACU16880.1| unknown [Glycine max]
Length = 157
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A MLDE + YV+FLQ Q
Sbjct: 81 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVAYVKFLQKQ 140
Query: 243 VEFLS 247
+E LS
Sbjct: 141 IEELS 145
>gi|449515097|ref|XP_004164586.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYI 181
K+R SS NS + R K +++++ + + ++ + A PK
Sbjct: 180 KSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNNASPKPK--- 236
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
RA RG ATD SL R RRE+I+ER++ILQKLVP KV + ML+E ++YV+FLQ
Sbjct: 237 -TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQL 294
Query: 242 QVEFLSM-KLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSII 282
Q++ LS L P+ Y+ GMD+ QQ L+SI+
Sbjct: 295 QIKLLSSDDLWMYAPIAYN-GMDIGL--------QQKLSSIL 327
>gi|223702400|gb|ACN21631.1| putative basic helix-loop-helix protein BHLH4 [Lotus japonicus]
Length = 275
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/76 (60%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI
Sbjct: 113 APHPPPMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAVMLDEI 171
Query: 233 INYVQFLQNQVEFLSM 248
++YV+FL+ QV+ LSM
Sbjct: 172 VDYVKFLRLQVKVLSM 187
>gi|449447291|ref|XP_004141402.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 327
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 122 KNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYI 181
K+R SS NS + R K +++++ + + ++ + A PK
Sbjct: 180 KSRKGTESSGNSKKVSSTRRRKCEEEQENGRSSCDMNSCSSDNSSEDDNNNASPKPK--- 236
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
RA RG ATD SL R RRE+I+ER++ILQKLVP KV + ML+E ++YV+FLQ
Sbjct: 237 -TRATRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQL 294
Query: 242 QVEFLSM-KLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSII 282
Q++ LS L P+ Y+ GMD+ QQ L+SI+
Sbjct: 295 QIKLLSSDDLWMYAPIAYN-GMDIGL--------QQKLSSIL 327
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
gi|222844816|gb|EEE82363.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 84/155 (54%), Gaps = 14/155 (9%)
Query: 118 DKKRKNRTNASS--------SFNSAQSKDPREVKSKKQKKGNVNDAKK----EEKENSPK 165
D+KRK R + S A P+ V + +QK N D+ K +P
Sbjct: 285 DRKRKGREEEAECHSEFIAISITMAHGNQPQSV-AIRQKTQNSADSSKPLQGRRDAANPL 343
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
D+E + A + + ++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + K
Sbjct: 344 KDAEFESADAKKRIRGSMSSKRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDK 402
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDF 260
A MLDE I Y++ LQ QV+ +SM + V MF F
Sbjct: 403 ASMLDEAIEYLKSLQLQVQMMSMGCSMVPMMFPGF 437
>gi|168056355|ref|XP_001780186.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668419|gb|EDQ55027.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA RG AT S+AERVRR KISERMK LQ LVP D+ T A MLD+ + YV+ LQ Q
Sbjct: 63 IRANRGHATHPRSIAERVRRGKISERMKKLQDLVPSMDRQTNTADMLDDAVEYVKQLQQQ 122
Query: 243 VEFLSMKLASVNPMFYDFG 261
V+ LS +A + + G
Sbjct: 123 VQELSKTVAELQQLQERLG 141
>gi|108710019|gb|ABF97814.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 481
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 159 EKENSPKADSEQK---VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E SP D+E + +A++PP ARR +A + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 287 EDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQEL 344
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
+P C+K T KA MLDE I Y++ LQ Q++ + M P+ +
Sbjct: 345 IPHCNK-TDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMF 386
>gi|224145129|ref|XP_002325537.1| predicted protein [Populus trichocarpa]
gi|222862412|gb|EEE99918.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A MLDE + YV+FLQ
Sbjct: 169 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEALAYVKFLQR 228
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 229 QIQELT 234
>gi|108710018|gb|ABF97813.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 485
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 6/103 (5%)
Query: 159 EKENSPKADSEQK---VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E SP D+E + +A++PP ARR +A + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 287 EDSESPSEDAESESAALARKPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQEL 344
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
+P C+K T KA MLDE I Y++ LQ Q++ + M P+ +
Sbjct: 345 IPHCNK-TDKASMLDEAIEYLKSLQLQLQMMWMGSGMAPPVMF 386
>gi|226493556|ref|NP_001141213.1| uncharacterized protein LOC100273300 [Zea mays]
gi|194703300|gb|ACF85734.1| unknown [Zea mays]
gi|223946721|gb|ACN27444.1| unknown [Zea mays]
Length = 154
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
M++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG 52
>gi|125545009|gb|EAY91148.1| hypothetical protein OsI_12756 [Oryza sativa Indica Group]
Length = 469
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 18/204 (8%)
Query: 59 AAVFETSCGDNHDHHSDDNCNEPSNNNSLATK-NQSTAVSSTEQQVTQSTVTTTATTTRM 117
+A+ + CG N +EP + + + A+ + TT ++
Sbjct: 178 SAIGSSICGSNQVQVQQRTASEPGRRGAPPSAVGSANAIPCGGRDHGHGHEATTVASS-- 235
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQK---VAK 174
R+N N+ +S K+K+ + E SP D+E + +A+
Sbjct: 236 ----SGRSNCCFGTNTTTEPTSTSNRSSKRKRLDTT-----EDSESPSEDAESESAALAR 286
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+PP ARR +A + H+L+ER RR++I+E+M+ LQ+L+P C+K T KA MLDE I
Sbjct: 287 KPPAKM--TTARRSRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASMLDEAIE 343
Query: 235 YVQFLQNQVEFLSMKLASVNPMFY 258
Y++ LQ Q++ + M P+ +
Sbjct: 344 YLKSLQLQLQMMWMGSGMAPPVMF 367
>gi|356534971|ref|XP_003536024.1| PREDICTED: transcription factor PIF3-like [Glycine max]
Length = 665
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 16/188 (8%)
Query: 81 PSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQ----- 135
PS + A K + + QV T T +K K ASSS S
Sbjct: 331 PSKQSEPAGKESAAKIDLIPNQVPGDNGTKGQTAA---EKSKEPAVASSSVCSGNGTDQG 387
Query: 136 SKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHS 195
S++P + +K+K + ++ E+ E E AK+ ++R +A + H+
Sbjct: 388 SEEPNQNLKRKRKDTDDSECHSEDVEE------ESAGAKKTAGGRGGAGSKRSRAAEVHN 441
Query: 196 LAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVN 254
L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM +
Sbjct: 442 LSERKRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSMGAGLYMP 500
Query: 255 PMFYDFGM 262
PM GM
Sbjct: 501 PMMLPAGM 508
>gi|242096368|ref|XP_002438674.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
gi|241916897|gb|EER90041.1| hypothetical protein SORBIDRAFT_10g024110 [Sorghum bicolor]
Length = 154
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 45/53 (84%), Gaps = 1/53 (1%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFG 261
M++L++LVPGC KV+G A +LDEIIN+VQ LQ QVE+LSM+LA+VNP DFG
Sbjct: 1 MELLKELVPGCSKVSGTALVLDEIINHVQSLQRQVEYLSMRLAAVNPRV-DFG 52
>gi|224136007|ref|XP_002327358.1| predicted protein [Populus trichocarpa]
gi|222835728|gb|EEE74163.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 50/65 (76%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E ++YV+FLQ Q
Sbjct: 188 IRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVDYVKFLQRQ 247
Query: 243 VEFLS 247
++ L+
Sbjct: 248 IQELT 252
>gi|326528369|dbj|BAJ93366.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 488
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 11/116 (9%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQK---VAKEPPKDYIHVRARRGQATDSHSLAER 199
+S K+K+G E SP D+E + + ++PP+ ARR +A + H+L+ER
Sbjct: 273 RSSKRKRG-----LDTEDSESPSEDAESESLALDRKPPQKL--TTARRSRAAEVHNLSER 325
Query: 200 VRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
RR++I+E+M+ LQ+L+P C+K T KA MLDE I Y++ LQ QV+ + M P
Sbjct: 326 RRRDRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKTLQMQVQMMWMGGGMAAP 380
>gi|356557515|ref|XP_003547061.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 411
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP DK T A MLD ++Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 392
Query: 243 VEFLS 247
V+ LS
Sbjct: 393 VQTLS 397
>gi|242038745|ref|XP_002466767.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
gi|241920621|gb|EER93765.1| hypothetical protein SORBIDRAFT_01g013843 [Sorghum bicolor]
Length = 535
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 73/113 (64%), Gaps = 5/113 (4%)
Query: 143 KSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRR 202
+S K+K+ + D++ ++ +++S +A++PP+ ARR +A + H+L+ER RR
Sbjct: 286 RSSKRKRLDTEDSESPSEDA--ESESAAMLARKPPQKM--TTARRSRAAEVHNLSERRRR 341
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
++I+E+M+ LQ+L+P C+K T KA MLDE I Y++ LQ QV+ + M P
Sbjct: 342 DRINEKMRALQELIPHCNK-TDKASMLDEAIEYLKSLQLQVQMMWMGSGIAAP 393
>gi|359480088|ref|XP_002263397.2| PREDICTED: transcription factor PIF1-like [Vitis vinifera]
Length = 517
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++ LQ QV+
Sbjct: 304 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 362
Query: 245 FLSMKLASVNPMFY 258
+SM + V PM Y
Sbjct: 363 MMSMGCSMV-PMMY 375
>gi|388509910|gb|AFK43021.1| unknown [Medicago truncatula]
Length = 102
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/46 (78%), Positives = 40/46 (86%)
Query: 209 MKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN 254
MKILQ LVPGC+KV GKA +LDEIINY+Q LQ QVEFLSMKL +VN
Sbjct: 1 MKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLSMKLEAVN 46
>gi|297744279|emb|CBI37249.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++ LQ QV+
Sbjct: 266 AKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQ 324
Query: 245 FLSMKLASVNPMFY 258
+SM + V PM Y
Sbjct: 325 MMSMGCSMV-PMMY 337
>gi|222080621|gb|ACM41587.1| bHLH transcription factor MYC4 [Catharanthus roseus]
Length = 259
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+FLQ
Sbjct: 182 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQK 241
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 242 QIQELT 247
>gi|168027605|ref|XP_001766320.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682534|gb|EDQ68952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 120
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 50/73 (68%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ RA+RG AT S+AERVRR KISERMK LQ LVP DK T + MLDE + YV+ LQ
Sbjct: 30 MRTRAKRGCATHPRSIAERVRRTKISERMKRLQDLVPNMDKQTNTSDMLDETVEYVKSLQ 89
Query: 241 NQVEFLSMKLASV 253
+V+ LS +A +
Sbjct: 90 RKVQELSDTVARL 102
>gi|356550347|ref|XP_003543549.1| PREDICTED: transcription factor bHLH122-like [Glycine max]
Length = 408
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP DK T A MLD ++Y++ LQ Q
Sbjct: 330 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQ 389
Query: 243 VEFLS 247
V+ LS
Sbjct: 390 VQTLS 394
>gi|255544792|ref|XP_002513457.1| DNA binding protein, putative [Ricinus communis]
gi|223547365|gb|EEF48860.1| DNA binding protein, putative [Ricinus communis]
Length = 418
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T + MLD ++Y++ LQ Q
Sbjct: 339 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 398
Query: 243 VEFLS 247
VE LS
Sbjct: 399 VETLS 403
>gi|168021524|ref|XP_001763291.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685426|gb|EDQ71821.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 537
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRG ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YVQFLQ QV
Sbjct: 443 RARRGSATDPQSVYARHRREKINERLKTLQHLVPNGAKVD-IVTMLDEAIHYVQFLQLQV 501
Query: 244 EFLSMK--LASVNPMFYDFGMDLDNTFMVRPDDQQNLNS 280
L P Y G+DL N+ P Q L S
Sbjct: 502 TLLKSDEYWMYATPNTYK-GIDLTNS----PPQTQRLQS 535
>gi|449526183|ref|XP_004170093.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH122-like
[Cucumis sativus]
Length = 437
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ+LVP DK T + MLD + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 243 VEFLS 247
V+ LS
Sbjct: 419 VQTLS 423
>gi|449442685|ref|XP_004139111.1| PREDICTED: transcription factor bHLH122-like [Cucumis sativus]
Length = 437
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ+LVP DK T + MLD + Y++ LQ Q
Sbjct: 359 LRAKRGCATHPRSIAERVRRTKISERMRKLQELVPNMDKQTNTSDMLDLAVEYIKGLQKQ 418
Query: 243 VEFLS 247
V+ LS
Sbjct: 419 VQTLS 423
>gi|296089857|emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 322 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 380
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+SM + PM GM
Sbjct: 381 IMSMGTGLCMPPMMLPTGM 399
>gi|6166283|gb|AAF04760.1|AF103808_1 helix-loop-helix protein 1A [Pinus taeda]
Length = 551
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 162 NSPKADSEQKVAKEPPKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
N P++ S + +E +D + VRA+RG AT S+AERVRR +ISERM+ LQ+LVP
Sbjct: 445 NLPRSTSSELAMEEFLQDAVPCKVRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNS 504
Query: 220 DKVT-GKAFMLDEIINYVQFLQNQVEFLS 247
DK T A MLDE + YV+ LQ QV+ L+
Sbjct: 505 DKQTVNIADMLDEAVEYVKSLQKQVQELA 533
>gi|3297812|emb|CAA19870.1| putative protein [Arabidopsis thaliana]
gi|7270337|emb|CAB80105.1| putative protein [Arabidopsis thaliana]
Length = 349
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 26/195 (13%)
Query: 92 QSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-------PREVKS 144
QS +T + +T S + AT+T DK ++ R N + N S D E K
Sbjct: 153 QSEISVTTTKSLTGSKKRSRATST--DKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKL 210
Query: 145 KKQKKGNVNDAKK-------EEKENSPKADS--EQKVAKEP-PKDYIHV----RARRGQA 190
KK+K G + + EE+ N D E +KE P +++ RA RG A
Sbjct: 211 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAA 270
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 271 TDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 329
Query: 250 LASVNPMFYDFGMDL 264
L P+ ++ GMD+
Sbjct: 330 LWMYAPIAFN-GMDI 343
>gi|449454115|ref|XP_004144801.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
gi|449522990|ref|XP_004168508.1| PREDICTED: transcription factor PIF3-like [Cucumis sativus]
Length = 696
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 245 FLSMKLAS-VNPMFYDFGMDLDNTFMVRP 272
+SM + PM + M NT + P
Sbjct: 517 IMSMGAGLFMPPMMFPGAMAPMNTPHIYP 545
>gi|356537351|ref|XP_003537191.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 384
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 164 PKADSE----QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
PK +E +K+ + P +RA+RG AT S+AERVRR +ISERM+ LQ+LVP
Sbjct: 277 PKTSAEMITMKKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNM 336
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DK T A MLD + Y++ LQ Q + LS K A
Sbjct: 337 DKQTNTADMLDLAVEYIKDLQKQFKTLSEKRA 368
>gi|359487706|ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 458 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 516
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+SM + PM GM
Sbjct: 517 IMSMGTGLCMPPMMLPTGM 535
>gi|168038260|ref|XP_001771619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677058|gb|EDQ63533.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 569
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 4/98 (4%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RG ATD S+ R RREKI+ER+K LQ+LVP ++V ML+E I++V+FL+ Q+
Sbjct: 471 RAKRGSATDPQSVYARHRREKINERLKTLQRLVPNGEQVD-IVTMLEEAIHFVKFLEFQL 529
Query: 244 EFLSM--KLASVNPMFYDFGMDLDNTFMVRPDDQQNLN 279
E L + +P Y+ GMD+ ++ P + LN
Sbjct: 530 ELLRSDDRWMFADPFIYN-GMDITGSYPHVPSGLERLN 566
>gi|30689839|ref|NP_195114.2| transcription factor bHLH85 [Arabidopsis thaliana]
gi|75298259|sp|Q84WK0.1|BH085_ARATH RecName: Full=Transcription factor bHLH85; AltName: Full=Basic
helix-loop-helix protein 85; Short=AtbHLH85; Short=bHLH
85; AltName: Full=Transcription factor EN 115; AltName:
Full=bHLH transcription factor bHLH085
gi|27808578|gb|AAO24569.1| At4g33880 [Arabidopsis thaliana]
gi|110736194|dbj|BAF00068.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332660887|gb|AEE86287.1| transcription factor bHLH85 [Arabidopsis thaliana]
Length = 352
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 26/195 (13%)
Query: 92 QSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-------PREVKS 144
QS +T + +T S + AT+T DK ++ R N + N S D E K
Sbjct: 156 QSEISVTTTKSLTGSKKRSRATST--DKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKL 213
Query: 145 KKQKKGNVNDAKK-------EEKENSPKADS--EQKVAKEP-PKDYIHV----RARRGQA 190
KK+K G + + EE+ N D E +KE P +++ RA RG A
Sbjct: 214 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAA 273
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 274 TDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 332
Query: 250 LASVNPMFYDFGMDL 264
L P+ ++ GMD+
Sbjct: 333 LWMYAPIAFN-GMDI 346
>gi|168012170|ref|XP_001758775.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689912|gb|EDQ76281.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 95
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 45/64 (70%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RARRG AT S+AER RR +ISERMK LQ LVP DK T A MLDE + YV+ LQ QV
Sbjct: 16 RARRGYATHPRSIAERNRRSRISERMKKLQDLVPNMDKQTNTADMLDEAVEYVKHLQTQV 75
Query: 244 EFLS 247
+ LS
Sbjct: 76 KDLS 79
>gi|168040637|ref|XP_001772800.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675877|gb|EDQ62367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA RG AT S+AERVRR KISERMK LQ+LVP D+ T A MLD+ + YV+ LQ Q
Sbjct: 379 LRANRGHATHPRSIAERVRRGKISERMKKLQELVPNSDRQTNTADMLDDAVEYVKQLQLQ 438
Query: 243 VEFLSMKLASV 253
V+ L+ +A +
Sbjct: 439 VQELTNTVAEL 449
>gi|449450552|ref|XP_004143026.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
gi|449522833|ref|XP_004168430.1| PREDICTED: transcription factor bHLH49-like [Cucumis sativus]
Length = 329
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQKLVP KV + ML+E ++YV+FLQ Q+
Sbjct: 238 RASRGSATDPQSLYARKRRERINERLRILQKLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 296
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS ++ P+ Y+ GMD+
Sbjct: 297 KLLSSDEMWMFAPLAYN-GMDI 317
>gi|20127093|gb|AAM10959.1|AF488616_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 352
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 100/195 (51%), Gaps = 26/195 (13%)
Query: 92 QSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-------PREVKS 144
QS +T + +T S + AT+T DK ++ R N + N S D E K
Sbjct: 156 QSEISVTTTKSLTGSKKRSRATST--DKNKRARVNKRAQKNVEMSGDNNEGEEEEGETKL 213
Query: 145 KKQKKGNVNDAKK-------EEKENSPKADS--EQKVAKEP-PKDYIHV----RARRGQA 190
KK+K G + + EE+ N D E +KE P +++ RA RG A
Sbjct: 214 KKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDPSKALNLNGKTRASRGAA 273
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 274 TDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 332
Query: 250 LASVNPMFYDFGMDL 264
L P+ ++ GMD+
Sbjct: 333 LWMYAPIAFN-GMDI 346
>gi|449439645|ref|XP_004137596.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
gi|449487081|ref|XP_004157490.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 458
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
R N ++ A PR +K+K + + A E EN + ++VA + H
Sbjct: 205 RDNETTLMTWASFDSPRSLKTKSIDE---DSACHVESENQEEEQDTKRVA-----NRSH- 255
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
ARR +A H+ +ER RR++I+E+MK LQKLVP K T KA MLDE+I Y++ LQ QV
Sbjct: 256 SARRSRAAAIHNQSERRRRDRINEKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQV 314
Query: 244 EFLSMKLASVNPMFYDFGM 262
+F+S++ S+ M GM
Sbjct: 315 QFMSVR--SMQQMIMPIGM 331
>gi|147770956|emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 443 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 501
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+SM + PM GM
Sbjct: 502 IMSMGTGLCMPPMMLPTGM 520
>gi|147866312|emb|CAN79863.1| hypothetical protein VITISV_021999 [Vitis vinifera]
Length = 346
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER+KILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 255 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 313
Query: 243 VEFLSM-KLASVNPMFY---DFGMDL 264
++ LS L P+ Y D G+DL
Sbjct: 314 IKLLSSDDLWMYAPLAYNGMDIGLDL 339
>gi|449447621|ref|XP_004141566.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
gi|449522500|ref|XP_004168264.1| PREDICTED: transcription factor bHLH80-like [Cucumis sativus]
Length = 244
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ++VP DK T A ML+E + YV+FLQ
Sbjct: 167 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQEVVPNMDKQTNTADMLEEAVEYVKFLQK 226
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 227 QIQELT 232
>gi|225428979|ref|XP_002264083.1| PREDICTED: transcription factor bHLH84-like [Vitis vinifera]
Length = 345
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER+KILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 254 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 312
Query: 243 VEFLSM-KLASVNPMFY---DFGMDL 264
++ LS L P+ Y D G+DL
Sbjct: 313 IKLLSSDDLWMYAPLAYNGMDIGLDL 338
>gi|356500459|ref|XP_003519049.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 378
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 164 PKADSE----QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
PK +E +K+ + P +RA+RG AT S+AERVRR +ISERM+ LQ+LVP
Sbjct: 271 PKTSAEMITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPHM 330
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
DK T A MLD + Y++ LQ Q + LS K A
Sbjct: 331 DKQTNTADMLDLAVEYIKDLQKQFKTLSEKRA 362
>gi|21593792|gb|AAM65759.1| putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 63/82 (76%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM + +V P+ D
Sbjct: 205 VKVLSMSRLGGVGAVAPLVTDM 226
>gi|296083058|emb|CBI22462.3| unnamed protein product [Vitis vinifera]
Length = 350
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 54/86 (62%), Gaps = 5/86 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER+KILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 259 ARASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 317
Query: 243 VEFLSM-KLASVNPMFY---DFGMDL 264
++ LS L P+ Y D G+DL
Sbjct: 318 IKLLSSDDLWMYAPLAYNGMDIGLDL 343
>gi|42569042|ref|NP_179083.2| transcription factor bHLH84 [Arabidopsis thaliana]
gi|75296240|sp|Q7XHI9.1|BH084_ARATH RecName: Full=Transcription factor bHLH84; AltName: Full=Basic
helix-loop-helix protein 84; Short=AtbHLH84; Short=bHLH
84; AltName: Full=bHLH transcription factor bHLH084
gi|33111969|emb|CAE12171.1| putative bHLH084 transcription factor [Arabidopsis thaliana]
gi|91806168|gb|ABE65812.1| basic helix-loop-helix protein/bHLH protein [Arabidopsis thaliana]
gi|330251237|gb|AEC06331.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 328
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 295
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLDNTFMVR 271
++ LS L P+ Y D G+DL + R
Sbjct: 296 IKLLSSDDLWMYAPIAYNGMDIGLDLKLNALTR 328
>gi|356505096|ref|XP_003521328.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 517
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVR 184
T SS S+ +P +V + ++ + +E + S D E + K+
Sbjct: 247 TMTSSPGGSSSCDEPVQVAAAEEDRKRKGREAEEWECQSEDVDFESEAKKQ---VCGSTS 303
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I+Y++ LQ QV+
Sbjct: 304 TKRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAISYLKSLQLQVQ 362
Query: 245 FLSMKLASVNPMF 257
+SM V MF
Sbjct: 363 MMSMGCGMVPVMF 375
>gi|224103739|ref|XP_002313175.1| predicted protein [Populus trichocarpa]
gi|222849583|gb|EEE87130.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 264 TRASRGAATDPQSLYARKRRERINERLRILQTLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 322
Query: 243 VEFLSMK-LASVNPMFYDFGMDL 264
++ LS + L P+ Y+ GMD+
Sbjct: 323 IKLLSSEDLWMYAPIAYN-GMDI 344
>gi|225460440|ref|XP_002271390.1| PREDICTED: transcription factor bHLH80-like [Vitis vinifera]
Length = 251
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+FLQ
Sbjct: 174 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 233
Query: 242 QVEFLS 247
+++ LS
Sbjct: 234 KIQELS 239
>gi|116831075|gb|ABK28492.1| unknown [Arabidopsis thaliana]
Length = 329
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 295
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLDNTFMVR 271
++ LS L P+ Y D G+DL + R
Sbjct: 296 IKLLSSDDLWMYAPIAYNGMDIGLDLKLNALTR 328
>gi|297746360|emb|CBI16416.3| unnamed protein product [Vitis vinifera]
Length = 297
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 219 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 278
Query: 243 VEFLS 247
V+ LS
Sbjct: 279 VKTLS 283
>gi|356553998|ref|XP_003545337.1| PREDICTED: uncharacterized protein LOC100797500 [Glycine max]
Length = 350
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 116 RMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE-------KENSPKADS 168
+M+K +N+ + + Q + SKK +K N + EE + +S
Sbjct: 188 KMNKGSENQKKRARALKDGQGC-MKNTWSKKNQKHASNGEEAEETNAGSDGQSSSSNMSE 246
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
+ ++K RA RG ATD SL R RRE+I+ER++ILQ LVP KV + M
Sbjct: 247 DDNISKSALNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTM 305
Query: 229 LDEIINYVQFLQNQVEFLSM-KLASVNPMFY---DFGMDLD 265
L+E +NYV+FLQ Q++ LS L P+ Y D G++L+
Sbjct: 306 LEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGLNLN 346
>gi|297836114|ref|XP_002885939.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
gi|297331779|gb|EFH62198.1| basic helix-loop-helix protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 237 TRASRGAATDPQSLYARKRRERINERLRILQHLVPNGTKVH-ISTMLEEAVQYVKFLQLQ 295
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLDNTFMVR 271
++ LS L P+ Y D G+DL + R
Sbjct: 296 IKLLSSDDLWMYAPIAYNGMDIGLDLKLNALTR 328
>gi|326492944|dbj|BAJ90328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 79/152 (51%), Gaps = 22/152 (14%)
Query: 159 EKENSPKADSEQK---VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKL 215
E SP D+E + + ++PP+ ARR +A + H+L+ER RR++I+E+M+ LQ+L
Sbjct: 5 EDSESPSEDAESESLALDRKPPQKL--TTARRSRAAEVHNLSERRRRDRINEKMRALQEL 62
Query: 216 VPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQ 275
+P C+K T KA MLDE I Y++ LQ QV+ M+ GM M P
Sbjct: 63 IPHCNK-TDKASMLDEAIEYLKTLQMQVQM----------MWMGGGMAAPPAVMF-PGMH 110
Query: 276 QNLNSIIAASAS-----APQVQCSPTAQLTAF 302
Q L + AS + APQ Q S Q F
Sbjct: 111 QYLPQMGPASMARMPFMAPQQQGSLPEQYAHF 142
>gi|168042242|ref|XP_001773598.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675137|gb|EDQ61636.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RG ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YV+FLQ QV
Sbjct: 443 RAKRGSATDPQSVYARHRREKINERLKNLQNLVPNGAKVD-IVTMLDEAIHYVKFLQTQV 501
Query: 244 EFLSMK--LASVNPMFYDFGMDL-DNTFMVRPDDQQNL 278
E L NP Y+ G+D+ D + M P+ + N+
Sbjct: 502 ELLKSDEFWMFANPHNYN-GIDISDPSSMHSPELESNI 538
>gi|312281971|dbj|BAJ33851.1| unnamed protein product [Thellungiella halophila]
Length = 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSM----KLASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDM 226
>gi|296089503|emb|CBI39322.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+FLQ
Sbjct: 104 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKFLQQ 163
Query: 242 QVEFLS 247
+++ LS
Sbjct: 164 KIQELS 169
>gi|357441953|ref|XP_003591254.1| Transcription factor PIF3 [Medicago truncatula]
gi|355480302|gb|AES61505.1| Transcription factor PIF3 [Medicago truncatula]
Length = 721
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 464 SKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 522
Query: 245 FLSMKLASVNP-MFYDFGM 262
+SM P M GM
Sbjct: 523 MMSMGAGLYMPQMMLPAGM 541
>gi|297809891|ref|XP_002872829.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
gi|297318666|gb|EFH49088.1| hypothetical protein ARALYDRAFT_490301 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSMK----LASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDM 226
>gi|18411987|ref|NP_567245.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|79324985|ref|NP_001031577.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|75277341|sp|O22768.2|UNE12_ARATH RecName: Full=Transcription factor UNE12; AltName: Full=Basic
helix-loop-helix protein 59; Short=AtbHLH59; Short=bHLH
59; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 12;
AltName: Full=Transcription factor EN 93; AltName:
Full=bHLH transcription factor bHLH059
gi|13605859|gb|AAK32915.1|AF367328_1 AT4g02590/T10P11_13 [Arabidopsis thaliana]
gi|3892050|gb|AAC78259.1| hypothetical protein [Arabidopsis thaliana]
gi|7269019|emb|CAB80752.1| hypothetical protein [Arabidopsis thaliana]
gi|23506061|gb|AAN28890.1| At4g02590/T10P11_13 [Arabidopsis thaliana]
gi|222422973|dbj|BAH19471.1| AT4G02590 [Arabidopsis thaliana]
gi|332656799|gb|AEE82199.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656800|gb|AEE82200.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSM----KLASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDM 226
>gi|20127058|gb|AAM10948.1|AF488592_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 310
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 146 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 204
Query: 243 VEFLSM----KLASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 205 VKVLSMSRLGGAGAVAPLVTDM 226
>gi|224124534|ref|XP_002330047.1| predicted protein [Populus trichocarpa]
gi|222871472|gb|EEF08603.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 119 KKRKNRTNASSSFNS-----AQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVA 173
+K K ASSS S S DP E +K + ++ E+ E +Q A
Sbjct: 388 EKTKEPVVASSSVGSDNSVERASDDPTENLKRKHRDTEESEGPSEDVEEESVGAKKQAPA 447
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
+ ++R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I
Sbjct: 448 R------AGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAI 500
Query: 234 NYVQFLQNQVEFLSMKLASVNP-MFYDFGM 262
Y++ LQ QV+ +SM P M GM
Sbjct: 501 EYLKTLQLQVQIMSMGAGLYMPSMMLPPGM 530
>gi|449438623|ref|XP_004137087.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
gi|449495759|ref|XP_004159936.1| PREDICTED: transcription factor bHLH85-like [Cucumis sativus]
Length = 279
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 185 RASRGSATDPQSLYARKRRERINERLRILQTLVPNGTKV-DISTMLEEAVQYVKFLQLQI 243
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ GMD+
Sbjct: 244 KLLSSDDLWMYAPIAYN-GMDI 264
>gi|297798526|ref|XP_002867147.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
gi|297312983|gb|EFH43406.1| hypothetical protein ARALYDRAFT_491291 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 91/201 (45%), Gaps = 42/201 (20%)
Query: 100 EQQVTQSTVTTTAT-----------TTRMDKKRKNRTNASSSFNSAQSKD------PREV 142
E+ + QS ++ T T T DK ++ R N S N S D
Sbjct: 151 EESLLQSEISVTTTKSLTGSKKRSRATSNDKNKRARVNKRSQKNIEMSGDNNGGEEEEGE 210
Query: 143 KSKKQKKG------------------NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVR 184
K KK+K G N D +++S K D K K R
Sbjct: 211 KLKKRKNGAMMSRQNSSTTFCTEEESNCADQDGGGEDSSSKEDDASKALNLNGK----TR 266
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q++
Sbjct: 267 ASRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQIK 325
Query: 245 FLSM-KLASVNPMFYDFGMDL 264
LS L P+ ++ GMD+
Sbjct: 326 LLSSDDLWMYAPIAFN-GMDI 345
>gi|449469332|ref|XP_004152375.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
gi|449530384|ref|XP_004172175.1| PREDICTED: transcription factor bHLH84-like [Cucumis sativus]
Length = 341
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 248 RASRGSATDPQSLYARKRRERINERLRILQSLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 306
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ GMD+
Sbjct: 307 KLLSSDDLWMYAPIAYN-GMDI 327
>gi|414873163|tpg|DAA51720.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 523
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKE---PPKDYIHVRARRGQATDSHSLAERVRR 202
+++KG D +SP D+E + A E P + Y RR +A + H+L+ER RR
Sbjct: 285 QKRKGRCRD-----DSDSPSEDAECEEASEETKPSRRY--GTKRRTRAAEVHNLSERRRR 337
Query: 203 EKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ QV+ + M + + PM +
Sbjct: 338 DRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQMQVQIMWMT-SGMAPMMF 391
>gi|186511471|ref|NP_001118919.1| transcription factor UNE12 [Arabidopsis thaliana]
gi|332656801|gb|AEE82201.1| transcription factor UNE12 [Arabidopsis thaliana]
Length = 247
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 62/82 (75%), Gaps = 5/82 (6%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 83 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 141
Query: 243 VEFLSM----KLASVNPMFYDF 260
V+ LSM +V P+ D
Sbjct: 142 VKVLSMSRLGGAGAVAPLVTDM 163
>gi|357509821|ref|XP_003625199.1| Transcription factor bHLH130 [Medicago truncatula]
gi|355500214|gb|AES81417.1| Transcription factor bHLH130 [Medicago truncatula]
Length = 319
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT SLAERVRR +ISERM+ LQ++VP DK T + MLD + Y++ LQ Q
Sbjct: 243 IRAKRGFATHPRSLAERVRRTRISERMRKLQEIVPNIDKQTCTSEMLDLAVEYIKDLQKQ 302
Query: 243 VEFLSMKLA 251
++ +S K A
Sbjct: 303 LKTMSAKRA 311
>gi|226509284|ref|NP_001148741.1| DNA binding protein [Zea mays]
gi|195621758|gb|ACG32709.1| DNA binding protein [Zea mays]
gi|414887073|tpg|DAA63087.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414887074|tpg|DAA63088.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 374
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 292 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 351
Query: 243 VEFL 246
V+ L
Sbjct: 352 VKVL 355
>gi|414590533|tpg|DAA41104.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 367
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 285 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 344
Query: 243 VEFL 246
V+ L
Sbjct: 345 VKVL 348
>gi|140084327|gb|ABO84930.1| Rhd6-like 1 [Physcomitrella patens]
Length = 762
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RAR+G A D S+A RVRRE+ISER+K+LQ L+P DKV ML++ I+YVQ L+ Q+
Sbjct: 640 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 698
Query: 244 EFL 246
+ L
Sbjct: 699 KML 701
>gi|255583282|ref|XP_002532405.1| DNA binding protein, putative [Ricinus communis]
gi|223527901|gb|EEF29990.1| DNA binding protein, putative [Ricinus communis]
Length = 355
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 330
Query: 243 VEFLS 247
+ LS
Sbjct: 331 YKTLS 335
>gi|297843750|ref|XP_002889756.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
gi|297335598|gb|EFH66015.1| hypothetical protein ARALYDRAFT_471048 [Arabidopsis lyrata subsp.
lyrata]
Length = 522
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 8/172 (4%)
Query: 95 AVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKD-PREVKSK--KQKKGN 151
+V+S + Q T + R D++ + + SS S S D P E S K+K +
Sbjct: 247 SVASAMPKDNQKACLITEDSCRKDQESE-KAVVCSSVGSGNSLDGPSESPSLSLKRKHSD 305
Query: 152 VNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKI 211
+ D E+ + + + KE + ++R ++ + H+L+ER RR++I+E+M+
Sbjct: 306 IQDIDCRHSEDVEEESGDGR--KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRA 363
Query: 212 LQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPMFYDFGM 262
LQ+L+P C+KV KA MLDE I Y++ LQ QV+ +SM + P+ + GM
Sbjct: 364 LQELIPNCNKVD-KASMLDEAIEYLKSLQLQVQIMSMASGYYMPPVMFPPGM 414
>gi|449443927|ref|XP_004139727.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 529
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y++ LQ QV+
Sbjct: 313 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNK-TDKASMLDEAIEYLKTLQLQVQM 371
Query: 246 LSMKLASVNPMF 257
+SM + MF
Sbjct: 372 MSMGCGMMPMMF 383
>gi|449468728|ref|XP_004152073.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 553
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y++ LQ QV+
Sbjct: 302 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQM 360
Query: 246 LSMKLASVNPMF 257
+SM V MF
Sbjct: 361 MSMGCGMVPMMF 372
>gi|357454359|ref|XP_003597460.1| Transcription factor bHLH122 [Medicago truncatula]
gi|355486508|gb|AES67711.1| Transcription factor bHLH122 [Medicago truncatula]
Length = 412
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ +RA+RG AT S+AERVRR KISERM+ LQ LVP DK T A MLD ++Y++ LQ
Sbjct: 330 MKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQ 389
Query: 241 NQVEFL 246
Q + L
Sbjct: 390 KQAQKL 395
>gi|356527594|ref|XP_003532393.1| PREDICTED: transcription factor bHLH137-like [Glycine max]
Length = 176
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 1 MAAFSYQQHHHPFLLDSSEFIEEGSFFSQLYYPPKFPTHDDHQEMIVVNNNSNNLLDAAA 60
MAAFS Q++HPFL+DS+ + P P + ++NNN+ ++ + +
Sbjct: 1 MAAFS-SQYYHPFLVDSACLSITPPIINTSSTLPPSPHY-------LLNNNNIHIQETSY 52
Query: 61 VF----ETSCGDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTR 116
ETSC DN S S+ KN S S ++ + T T
Sbjct: 53 SVTNNQETSCVDNQ---SSKVTTISDTEYSVVNKNHSPETSMVVDKLEKGEQFTQKVVTP 109
Query: 117 MDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
M+K++K R SS S + GN +++K+ E+K A++P
Sbjct: 110 MEKEKKRRARNGSSKESTEG-------------GN-----EKQKKPKEVKKDEKKGAEDP 151
Query: 177 PKDYIHVRARRGQATDSHSLAERVR 201
P YIHVRARRGQATDSHSLAERV+
Sbjct: 152 PTGYIHVRARRGQATDSHSLAERVQ 176
>gi|42567227|ref|NP_194608.3| transcription factor bHLH23 [Arabidopsis thaliana]
gi|75313939|sp|Q9SVU6.1|BH023_ARATH RecName: Full=Transcription factor bHLH23; AltName: Full=Basic
helix-loop-helix protein 23; Short=AtbHLH23; Short=bHLH
23; AltName: Full=Transcription factor EN 107; AltName:
Full=bHLH transcription factor bHLH023
gi|4218119|emb|CAA22973.1| putative protein [Arabidopsis thaliana]
gi|7269734|emb|CAB81467.1| putative protein [Arabidopsis thaliana]
gi|225898825|dbj|BAH30543.1| hypothetical protein [Arabidopsis thaliana]
gi|332660145|gb|AEE85545.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 413
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A H L+ER RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+ LQ+Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 245 FLSMKLASVNPMFY 258
SM + PM Y
Sbjct: 332 MFSMGHVMIPPMMY 345
>gi|297809111|ref|XP_002872439.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297318276|gb|EFH48698.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 185 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 244
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 245 QIQELT 250
>gi|255573157|ref|XP_002527508.1| DNA binding protein, putative [Ricinus communis]
gi|223533148|gb|EEF34906.1| DNA binding protein, putative [Ricinus communis]
Length = 296
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD S+ R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q
Sbjct: 207 TRASRGAATDPQSIYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 265
Query: 243 VEFLSM-KLASVNPMFYDFGMDL 264
++ LS L P+ Y+ GMD+
Sbjct: 266 IKLLSSDDLWMYAPLAYN-GMDI 287
>gi|449515805|ref|XP_004164938.1| PREDICTED: transcription factor PIF1-like [Cucumis sativus]
Length = 549
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y++ LQ QV+
Sbjct: 298 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKA-DKASMLDEAIEYLKTLQLQVQM 356
Query: 246 LSMKLASVNPMF 257
+SM V MF
Sbjct: 357 MSMGCGMVPMMF 368
>gi|312282767|dbj|BAJ34249.1| unnamed protein product [Thellungiella halophila]
Length = 363
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 285 VRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 344
Query: 243 VEFL 246
+ L
Sbjct: 345 YKIL 348
>gi|15233768|ref|NP_192657.1| transcription factor bHLH81 [Arabidopsis thaliana]
gi|75311758|sp|Q9M0R0.1|BH081_ARATH RecName: Full=Transcription factor bHLH81; AltName: Full=Basic
helix-loop-helix protein 81; Short=AtbHLH81; Short=bHLH
81; AltName: Full=Transcription factor EN 72; AltName:
Full=bHLH transcription factor bHLH081
gi|7267561|emb|CAB78042.1| putative protein [Arabidopsis thaliana]
gi|34146832|gb|AAQ62424.1| At4g09180 [Arabidopsis thaliana]
gi|110741264|dbj|BAF02182.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|332657332|gb|AEE82732.1| transcription factor bHLH81 [Arabidopsis thaliana]
Length = 262
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 48/66 (72%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 183 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKVLQR 242
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 243 QIQELT 248
>gi|356562241|ref|XP_003549380.1| PREDICTED: uncharacterized protein LOC100780907 [Glycine max]
Length = 353
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E +NYV+FLQ Q
Sbjct: 264 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVNYVKFLQLQ 322
Query: 243 VEFLSMKLASVNPMFYDFGMDL 264
++ LS + F G+D+
Sbjct: 323 IKLLSSDDLWMYAPFAHNGLDI 344
>gi|356536868|ref|XP_003536955.1| PREDICTED: transcription factor PIF1-like [Glycine max]
Length = 491
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R A + H+L+ER RR++I+E+MK LQ+L+P C+K + KA MLDE I Y++ LQ QV+
Sbjct: 273 KRSHAAEVHNLSERRRRDRINEKMKALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 331
Query: 246 LSMKLASVNPMFY 258
+SM V PM +
Sbjct: 332 MSMGCGMV-PMIF 343
>gi|168056250|ref|XP_001780134.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668446|gb|EDQ55053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 50/74 (67%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ RA+RG AT S+AERVRR +ISERMK LQ LVP +K T + MLDE + YV+ LQ
Sbjct: 1 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTSDMLDETVEYVKSLQ 60
Query: 241 NQVEFLSMKLASVN 254
+V+ L+ +A +
Sbjct: 61 MKVKELTETIAQLK 74
>gi|224060782|ref|XP_002300268.1| predicted protein [Populus trichocarpa]
gi|222847526|gb|EEE85073.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA +G ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 224 TRASKGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 282
Query: 243 VEFLSMK-LASVNPMFYDFGMD--LDNTFMVRP 272
++ LS + L P+ Y+ GMD LD+ + P
Sbjct: 283 IKLLSSEDLWMYAPIAYN-GMDIGLDHLKLTTP 314
>gi|255560265|ref|XP_002521150.1| Phytochrome-interacting factor, putative [Ricinus communis]
gi|223539719|gb|EEF41301.1| Phytochrome-interacting factor, putative [Ricinus communis]
Length = 572
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 53/72 (73%), Gaps = 1/72 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+ER RR++I+E+M+ LQ+L+P C+K + KA MLDE I Y++ LQ QV+
Sbjct: 357 KRSRAAEVHNLSERRRRDRINEKMRALQELIPRCNK-SDKASMLDEAIEYLKSLQLQVQM 415
Query: 246 LSMKLASVNPMF 257
+SM + V MF
Sbjct: 416 MSMGCSMVPMMF 427
>gi|168027850|ref|XP_001766442.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682351|gb|EDQ68770.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 879
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RAR+G A D S+A RVRRE+ISER+K+LQ L+P DKV ML++ I YVQ L+ Q+
Sbjct: 755 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLELQI 813
Query: 244 EFL 246
+ L
Sbjct: 814 KML 816
>gi|297848526|ref|XP_002892144.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337986|gb|EFH68403.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 306
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 148 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 206
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 207 VKVLSM 212
>gi|118488234|gb|ABK95936.1| unknown [Populus trichocarpa]
Length = 283
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 162 NSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
N P+A A P+ VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP +K
Sbjct: 222 NQPQASGSNGGAPAQPRQ--RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANK 279
Query: 222 V 222
V
Sbjct: 280 V 280
>gi|356504823|ref|XP_003521194.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 387
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 49/69 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 303 IRAKRGFATHPRSIAERVRRTRISERIRKLQELVPTMDKQTSTAEMLDLALDYIKDLQKQ 362
Query: 243 VEFLSMKLA 251
+ LS K A
Sbjct: 363 FKTLSDKRA 371
>gi|226505986|ref|NP_001147910.1| DNA binding protein [Zea mays]
gi|195614520|gb|ACG29090.1| DNA binding protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 243 VEFLSMKLASVN 254
V+ L+ AS
Sbjct: 357 VKALNESRASCT 368
>gi|255543048|ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical protein [Ricinus communis]
Length = 758
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 156 KKEEKENSPKADSEQKV--AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ 213
++ E+ P D E++ K+ ++R +A + H+L+ER RR++I+E+M+ LQ
Sbjct: 430 RETEESEGPSEDVEEESVGGKKAAPARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQ 489
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+L+P C+KV KA MLDE I Y++ LQ QV+ +SM
Sbjct: 490 ELIPNCNKVD-KASMLDEAIEYLKTLQLQVQIMSM 523
>gi|371534690|gb|AEX32796.1| phytochrome-interacting factor 3 [Malus x domestica]
Length = 713
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Query: 182 HVRA---RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF 238
H R +R +A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++
Sbjct: 445 HARGMGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKT 503
Query: 239 LQNQVEFLSM 248
LQ QV+ +SM
Sbjct: 504 LQLQVQMMSM 513
>gi|147805319|emb|CAN71946.1| hypothetical protein VITISV_007899 [Vitis vinifera]
Length = 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 243 VEFLSM-KLASVNPMFYDFGMDL 264
++ LS + P+ Y+ GMD+
Sbjct: 346 IKLLSSDDMWMYAPIAYN-GMDI 367
>gi|225458820|ref|XP_002283302.1| PREDICTED: transcription factor bHLH84 [Vitis vinifera]
Length = 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q
Sbjct: 287 TRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 345
Query: 243 VEFLSM-KLASVNPMFYDFGMDL 264
++ LS + P+ Y+ GMD+
Sbjct: 346 IKLLSSDDMWMYAPIAYN-GMDI 367
>gi|414869403|tpg|DAA47960.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 380
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 297 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 356
Query: 243 VEFLSMKLASVN 254
V+ L+ AS
Sbjct: 357 VKALNESRASCT 368
>gi|449437603|ref|XP_004136581.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449522885|ref|XP_004168456.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 366
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T A MLD ++Y++ LQ Q
Sbjct: 282 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKELQKQ 341
Query: 243 VEFLS 247
+ LS
Sbjct: 342 FKTLS 346
>gi|238008194|gb|ACR35132.1| unknown [Zea mays]
gi|413946840|gb|AFW79489.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 638
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 380 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 438
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 439 MMSMGSGLCIPPMLLPPAM 457
>gi|326495514|dbj|BAJ85853.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 391
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 307 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 366
Query: 243 VEFLSMKLASV 253
V+ ++ AS
Sbjct: 367 VKVINESRASC 377
>gi|77556960|gb|ABA99756.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|125537220|gb|EAY83708.1| hypothetical protein OsI_38930 [Oryza sativa Indica Group]
gi|125579902|gb|EAZ21048.1| hypothetical protein OsJ_36693 [Oryza sativa Japonica Group]
Length = 304
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 123 NRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIH 182
+T S A+ K ++ K +K +V + + S Q+VA
Sbjct: 156 GQTRGSKCARKAEPKRAKKAKQTVEKDASVAIPNGSCSISDNDSSSSQEVADAGATSKGK 215
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RRE+I+ER+K LQ LVP KV + ML+E ++YV+FLQ Q
Sbjct: 216 SRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQ 274
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLD 265
++ LS ++ P+ Y + G+DL+
Sbjct: 275 IKLLSSDEMWMYAPIAYNGMNIGLDLN 301
>gi|356534283|ref|XP_003535686.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 176 PPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINY 235
PP + RA G ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + Y
Sbjct: 257 PPNLHRKSRATTGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQY 315
Query: 236 VQFLQNQVEFLSM-KLASVNPMFY---DFGMDL 264
V+FLQ Q++ LS L P+ Y + G+DL
Sbjct: 316 VKFLQLQIKLLSSDDLWMYAPIAYNGINIGLDL 348
>gi|125562107|gb|EAZ07555.1| hypothetical protein OsI_29809 [Oryza sativa Indica Group]
Length = 403
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 322 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 381
Query: 243 VEFL 246
V+ L
Sbjct: 382 VKGL 385
>gi|339716188|gb|AEJ88333.1| putative MYC protein [Tamarix hispida]
Length = 160
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ
Sbjct: 83 RVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLEEAVEYVKGLQK 142
Query: 242 QVEFL 246
Q+E L
Sbjct: 143 QIEEL 147
>gi|224075772|ref|XP_002304761.1| predicted protein [Populus trichocarpa]
gi|222842193|gb|EEE79740.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T + MLD ++Y++ LQ Q
Sbjct: 344 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQ 403
Query: 243 VEFLS 247
+ LS
Sbjct: 404 FKALS 408
>gi|334182257|ref|NP_001184895.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|4587574|gb|AAD25805.1|AC006550_13 Contains PF|00010 helix-loop-helix DNA-binding domain. ESTs
gb|T45640 and gb|T22783 come from this gene [Arabidopsis
thaliana]
gi|332189398|gb|AEE27519.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 297
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 139 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 197
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 198 VKVLSM 203
>gi|297827895|ref|XP_002881830.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297327669|gb|EFH58089.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 243 VEFL 246
+ L
Sbjct: 339 YKIL 342
>gi|226529517|ref|NP_001151233.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|195645224|gb|ACG42080.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
gi|414886017|tpg|DAA62031.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 408
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 325 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 384
Query: 243 VEFL 246
V+ L
Sbjct: 385 VKVL 388
>gi|147862096|emb|CAN80884.1| hypothetical protein VITISV_018653 [Vitis vinifera]
Length = 446
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 362 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 421
Query: 243 VE 244
V+
Sbjct: 422 VK 423
>gi|297846606|ref|XP_002891184.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337026|gb|EFH67443.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 256
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ Q
Sbjct: 178 VRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQGQ 237
Query: 243 VEFLS 247
++ L+
Sbjct: 238 IQELT 242
>gi|15219606|ref|NP_174776.1| transcription factor bHLH80 [Arabidopsis thaliana]
gi|75308885|sp|Q9C8P8.1|BH080_ARATH RecName: Full=Transcription factor bHLH80; AltName: Full=Basic
helix-loop-helix protein 80; Short=AtbHLH80; Short=bHLH
80; AltName: Full=Transcription factor EN 71; AltName:
Full=bHLH transcription factor bHLH080
gi|12324283|gb|AAG52112.1|AC023064_5 helix-loop-helix protein 1A, putative; 28707-26892 [Arabidopsis
thaliana]
gi|15724178|gb|AAL06481.1|AF411791_1 At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|20127088|gb|AAM10958.1|AF488612_1 putative bHLH transcription factor [Arabidopsis thaliana]
gi|20147401|gb|AAM10410.1| At1g35460/F12A4_2 [Arabidopsis thaliana]
gi|332193674|gb|AEE31795.1| transcription factor bHLH80 [Arabidopsis thaliana]
Length = 259
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A ML+E + YV+ LQ+
Sbjct: 180 RVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVEYVKALQS 239
Query: 242 QVEFLS 247
Q++ L+
Sbjct: 240 QIQELT 245
>gi|168039365|ref|XP_001772168.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676499|gb|EDQ62981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 945
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RAR+G A D S+A RVRRE+ISER+K+LQ L+P DKV ML++ I+YVQ L+ Q+
Sbjct: 823 RARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAISYVQCLEFQI 881
Query: 244 EFL 246
+ L
Sbjct: 882 KML 884
>gi|242082273|ref|XP_002445905.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
gi|241942255|gb|EES15400.1| hypothetical protein SORBIDRAFT_07g027810 [Sorghum bicolor]
Length = 399
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 50/71 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 317 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQKQ 376
Query: 243 VEFLSMKLASV 253
V+ L+ AS
Sbjct: 377 VKALNESRASC 387
>gi|42569863|ref|NP_181757.2| transcription factor bHLH130 [Arabidopsis thaliana]
gi|75288858|sp|Q66GR3.1|BH130_ARATH RecName: Full=Transcription factor bHLH130; AltName: Full=Basic
helix-loop-helix protein 130; Short=AtbHLH130;
Short=bHLH 130; AltName: Full=Transcription factor EN
69; AltName: Full=bHLH transcription factor bHLH130
gi|51536448|gb|AAU05462.1| At2g42280 [Arabidopsis thaliana]
gi|52421281|gb|AAU45210.1| At2g42280 [Arabidopsis thaliana]
gi|110737862|dbj|BAF00869.1| putative bHLH transcription factor [Arabidopsis thaliana]
gi|330255005|gb|AEC10099.1| transcription factor bHLH130 [Arabidopsis thaliana]
Length = 359
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 279 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 338
Query: 243 VEFL 246
+ L
Sbjct: 339 YKIL 342
>gi|115477188|ref|NP_001062190.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|42408931|dbj|BAD10188.1| putative transcription factor RAU1 [Oryza sativa Japonica Group]
gi|113624159|dbj|BAF24104.1| Os08g0506700 [Oryza sativa Japonica Group]
gi|125603951|gb|EAZ43276.1| hypothetical protein OsJ_27873 [Oryza sativa Japonica Group]
gi|215712322|dbj|BAG94449.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 377
Query: 243 VEFL 246
V+ L
Sbjct: 378 VKGL 381
>gi|357148389|ref|XP_003574744.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 377
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKELQEQ 359
Query: 243 VEFL 246
V+ +
Sbjct: 360 VKVI 363
>gi|238015240|gb|ACR38655.1| unknown [Zea mays]
Length = 435
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 177 AKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQ 235
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 236 MMSMGSGLCIPPMLLPPAM 254
>gi|18379045|ref|NP_563672.1| transcription factor bHLH7 [Arabidopsis thaliana]
gi|75305862|sp|Q93Y00.1|BH007_ARATH RecName: Full=Transcription factor bHLH7; AltName: Full=Basic
helix-loop-helix protein 7; Short=AtbHLH7; Short=bHLH 7;
AltName: Full=Transcription factor EN 92; AltName:
Full=bHLH transcription factor bHLH007
gi|21735477|gb|AAL55714.2|AF251692_1 putative transcription factor BHLH7 [Arabidopsis thaliana]
gi|15450779|gb|AAK96661.1| Unknown protein [Arabidopsis thaliana]
gi|21387097|gb|AAM47952.1| unknown protein [Arabidopsis thaliana]
gi|332189397|gb|AEE27518.1| transcription factor bHLH7 [Arabidopsis thaliana]
Length = 302
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 57/66 (86%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A M+DEI++YV+FL+ Q
Sbjct: 144 VRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIVDYVKFLRLQ 202
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 203 VKVLSM 208
>gi|18403381|ref|NP_564583.1| transcription factor bHLH122 [Arabidopsis thaliana]
gi|75308807|sp|Q9C690.1|BH122_ARATH RecName: Full=Transcription factor bHLH122; AltName: Full=Basic
helix-loop-helix protein 122; Short=AtbHLH122;
Short=bHLH 122; AltName: Full=Transcription factor EN
70; AltName: Full=bHLH transcription factor bHLH122
gi|12320788|gb|AAG50543.1|AC079828_14 unknown protein [Arabidopsis thaliana]
gi|14334500|gb|AAK59447.1| unknown protein [Arabidopsis thaliana]
gi|17104811|gb|AAL34294.1| unknown protein [Arabidopsis thaliana]
gi|332194505|gb|AEE32626.1| transcription factor bHLH122 [Arabidopsis thaliana]
Length = 379
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISERM+ LQ LVP D T A MLD + Y++ LQ Q
Sbjct: 304 IRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQ 363
Query: 243 VEFL 246
V+ L
Sbjct: 364 VKAL 367
>gi|2673918|gb|AAB88652.1| unknown protein [Arabidopsis thaliana]
Length = 380
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 300 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDYIKDLQRQ 359
Query: 243 VEFL 246
+ L
Sbjct: 360 YKIL 363
>gi|19401700|gb|AAL87667.1| transcription factor RAU1 [Oryza sativa]
Length = 150
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 69 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 128
Query: 243 VEFL 246
V+ L
Sbjct: 129 VKGL 132
>gi|414869406|tpg|DAA47963.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 277
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 194 VRAKRGCATHPRSIAERVRRTKISERIRKLQELVPDMDKQTNTSDMLDLAVDYIKDLQKQ 253
Query: 243 VEFLSMKLASVN 254
V+ L+ AS
Sbjct: 254 VKALNESRASCT 265
>gi|297852830|ref|XP_002894296.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340138|gb|EFH70555.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
+D EQ ++ P +RA+RG AT S+AERVRR KISERM+ LQ LVP D T
Sbjct: 289 SDIEQLLSDSIP---CKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDTQTNT 345
Query: 226 AFMLDEIINYVQFLQNQVEFL 246
A MLD + Y++ LQ QV+ L
Sbjct: 346 ADMLDLAVQYIKDLQEQVKTL 366
>gi|115479871|ref|NP_001063529.1| Os09g0487900 [Oryza sativa Japonica Group]
gi|113631762|dbj|BAF25443.1| Os09g0487900 [Oryza sativa Japonica Group]
Length = 401
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 319 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 378
Query: 243 VEFL 246
V+ L
Sbjct: 379 VKVL 382
>gi|312282747|dbj|BAJ34239.1| unnamed protein product [Thellungiella halophila]
Length = 308
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%), Gaps = 1/66 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRGQATD HS+AER+RRE+I+ER++ LQ+LVP K T +A M+DEI++YV+FL+ Q
Sbjct: 150 VRARRGQATDPHSIAERLRRERIAERIRALQELVPTVSK-TDRAAMIDEIVDYVKFLRLQ 208
Query: 243 VEFLSM 248
V+ LSM
Sbjct: 209 VKVLSM 214
>gi|224139834|ref|XP_002323299.1| predicted protein [Populus trichocarpa]
gi|222867929|gb|EEF05060.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD ++Y++ LQ Q
Sbjct: 30 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVDYIKDLQKQ 89
Query: 243 VEFLS 247
+ LS
Sbjct: 90 YKTLS 94
>gi|359487434|ref|XP_003633592.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 408
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+L P DK T A MLD + Y++ LQ Q
Sbjct: 333 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 392
Query: 243 VEFL 246
V+ L
Sbjct: 393 VKTL 396
>gi|224067212|ref|XP_002302411.1| predicted protein [Populus trichocarpa]
gi|222844137|gb|EEE81684.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 113/225 (50%), Gaps = 27/225 (12%)
Query: 55 LLDAAAVFETSC--GDNHDHHS---DDNCNEPSNNNSLATKNQ--------STAVSSTEQ 101
L A+ ET+C GD + DDN +P+ N+ LA Q ++ +
Sbjct: 140 LFPEIAMAETACMNGDMSGDKTGDLDDNL-KPAANDVLAKGLQLKRKLDVPEPIANTLDD 198
Query: 102 QVTQSTVTTTATTTR-MDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEK 160
++ VT TR + + +KN+ NA S D E +S G + + E+
Sbjct: 199 MKKKARVTRNVQKTRKVGQSKKNQKNAPDI-----SHD--EEESNAGPDGQSSSSCSSEE 251
Query: 161 ENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCD 220
+N+ + DS+ KV+ + RA RG ATD SL R RRE+I+ER+KILQ LVP
Sbjct: 252 DNASQ-DSDSKVSGVLNSNG-KTRATRGAATDPQSLYARKRRERINERLKILQNLVPNGT 309
Query: 221 KVTGKAFMLDEIINYVQFLQNQVEFLSM-KLASVNPMFYDFGMDL 264
KV + ML+E ++YV FLQ Q++ LS L P+ Y+ G+D+
Sbjct: 310 KVD-ISTMLEEAVHYVNFLQLQIKLLSSDDLWMYAPLAYN-GIDI 352
>gi|125564183|gb|EAZ09563.1| hypothetical protein OsI_31842 [Oryza sativa Indica Group]
Length = 400
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 318 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 377
Query: 243 VEFL 246
V+ L
Sbjct: 378 VKVL 381
>gi|255538082|ref|XP_002510106.1| transcription factor, putative [Ricinus communis]
gi|223550807|gb|EEF52293.1| transcription factor, putative [Ricinus communis]
Length = 327
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 238 RAGRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 296
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ GMD+
Sbjct: 297 KLLSSDDLWMYAPIAYN-GMDI 317
>gi|218199079|gb|EEC81506.1| hypothetical protein OsI_24867 [Oryza sativa Indica Group]
Length = 593
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T K
Sbjct: 381 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 439
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD-------FGMDLDNTFMVRPDDQ-QN 277
A +LDE I Y++ LQ QV+ + M V MF GM L+ M P Q Q
Sbjct: 440 ASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACM--PGAQAQG 497
Query: 278 LNSI 281
LN +
Sbjct: 498 LNQM 501
>gi|56784181|dbj|BAD81566.1| putative BP-5 protein [Oryza sativa Japonica Group]
Length = 565
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 367
Query: 246 LSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 368 MSMGTGLCIPPMLLPTAM 385
>gi|302810858|ref|XP_002987119.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
gi|300145016|gb|EFJ11695.1| hypothetical protein SELMODRAFT_28264 [Selaginella moellendorffii]
Length = 85
Score = 70.9 bits (172), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/61 (59%), Positives = 46/61 (75%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLDE + Y++FLQ Q
Sbjct: 25 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKQTNTSDMLDEAVEYMKFLQKQ 84
Query: 243 V 243
V
Sbjct: 85 V 85
>gi|414589820|tpg|DAA40391.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 244
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 160 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTADMLDLAVDYIKDLQKQ 219
Query: 243 VEFL 246
V+ L
Sbjct: 220 VKVL 223
>gi|224120208|ref|XP_002330991.1| predicted protein [Populus trichocarpa]
gi|222872921|gb|EEF10052.1| predicted protein [Populus trichocarpa]
Length = 355
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 46/65 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD + Y++ LQ Q
Sbjct: 271 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVVYIKDLQKQ 330
Query: 243 VEFLS 247
+ LS
Sbjct: 331 YKTLS 335
>gi|168045219|ref|XP_001775076.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673663|gb|EDQ60183.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 73
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ RA+RG AT S+AERVRR +ISERMK LQ LVP +K T A MLDE + YV+ LQ
Sbjct: 3 MRARAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMEKTTNTADMLDETVEYVKSLQ 62
Query: 241 NQVEFLSMKLA 251
+V L +A
Sbjct: 63 VKVSELQETIA 73
>gi|222636419|gb|EEE66551.1| hypothetical protein OsJ_23063 [Oryza sativa Japonica Group]
Length = 517
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T K
Sbjct: 305 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 363
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD-------FGMDLDNTFMVRPDDQ-QN 277
A +LDE I Y++ LQ QV+ + M V MF GM L+ M P Q Q
Sbjct: 364 ASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACM--PGAQAQG 421
Query: 278 LNSI 281
LN +
Sbjct: 422 LNQM 425
>gi|357480671|ref|XP_003610621.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355511956|gb|AES93579.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 331
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R+ RG ATD SL R RRE+I+ER+KILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 225 RSSRGPATDPQSLYARKRRERINERLKILQNLVPNGTKV-DISTMLEEAVQYVKFLQLQI 283
Query: 244 EFLSM-KLASVNPMFYDFGMDLDNTFMVRP 272
+ LS +P+ Y+ GM++ + P
Sbjct: 284 KLLSSDDTWMYSPIAYN-GMNIGLELGITP 312
>gi|125541459|gb|EAY87854.1| hypothetical protein OsI_09276 [Oryza sativa Indica Group]
Length = 431
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 23/80 (28%)
Query: 191 TDSHSLAERV----------------------RREKISERMKILQKLVPGCDKVTGKAFM 228
TD HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 219 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 277
Query: 229 LDEIINYVQFLQNQVEFLSM 248
LDEII+YV+FLQ QV+ LSM
Sbjct: 278 LDEIIDYVKFLQLQVKVLSM 297
>gi|125606147|gb|EAZ45183.1| hypothetical protein OsJ_29826 [Oryza sativa Japonica Group]
Length = 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER++ LQ+LVP +K T A MLD ++Y++ LQ Q
Sbjct: 297 IRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMEKQTNTADMLDLAVDYIKELQKQ 356
Query: 243 VEFL 246
V+ L
Sbjct: 357 VKVL 360
>gi|242050734|ref|XP_002463111.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
gi|241926488|gb|EER99632.1| hypothetical protein SORBIDRAFT_02g037990 [Sorghum bicolor]
Length = 282
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
+ RA RG ATD SL R RRE+I+ER++ILQKLVP KV + ML+E YV+FLQ
Sbjct: 189 YTRASRGAATDPQSLYARKRRERINERLRILQKLVPNGTKV-DISTMLEEAAQYVKFLQL 247
Query: 242 QVEFLS 247
Q++ LS
Sbjct: 248 QIKLLS 253
>gi|297596562|ref|NP_001042775.2| Os01g0286100 [Oryza sativa Japonica Group]
gi|215717101|dbj|BAG95464.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673123|dbj|BAF04689.2| Os01g0286100 [Oryza sativa Japonica Group]
Length = 637
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 381 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 439
Query: 246 LSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 440 MSMGTGLCIPPMLLPTAM 457
>gi|302142209|emb|CBI19412.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E ++YV+FLQ Q+
Sbjct: 94 RASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 152
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS + P+ Y+ GMD+
Sbjct: 153 KLLSSDDMWMYAPIAYN-GMDI 173
>gi|140084334|gb|ABO84931.1| Rhd6-like 2 [Physcomitrella patens]
Length = 173
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
+ RAR+G A D S+A RVRRE+ISER+K+LQ L+P DKV ML++ I YVQ L+
Sbjct: 46 LKPRARQGSANDPQSIAARVRRERISERLKVLQALIPNGDKVD-MVTMLEKAITYVQCLE 104
Query: 241 NQVEFL 246
Q++ L
Sbjct: 105 LQIKML 110
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
gi|297315308|gb|EFH45731.1| hypothetical protein ARALYDRAFT_913634 [Arabidopsis lyrata subsp.
lyrata]
Length = 1780
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+LAER RREKI+E +K LQ+L+P C+K T K LD+ I YV++LQ+Q++
Sbjct: 581 KRSRTAEMHNLAERRRREKINENIKTLQELIPRCNKST-KVSTLDDAIEYVKWLQSQIQM 639
Query: 246 LSMKLASVNPMFY 258
+S + PM Y
Sbjct: 640 MSTGQGMMPPMMY 652
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+LAER RREKI+E+MK LQ+L+P C+K T K LD I YV++LQ+Q++
Sbjct: 135 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLDAAIEYVKWLQSQIQM 193
Query: 246 LSM 248
+ M
Sbjct: 194 ILM 196
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+LAER RREKI+E+MK LQ+L+P C+K T K L+++I Y++ LQ Q++
Sbjct: 1139 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYMKSLQMQIQM 1197
Query: 246 LS 247
+S
Sbjct: 1198 MS 1199
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+LAER RREKI+E+MK LQ+L+P C+K T K L+++I YV+ L+ Q++
Sbjct: 1569 KRSRAAEMHNLAERRRREKINEKMKTLQELIPRCNKST-KVSTLEDVIEYVKSLEMQIQH 1627
Query: 246 LSM 248
M
Sbjct: 1628 YVM 1630
>gi|225441696|ref|XP_002277274.1| PREDICTED: transcription factor bHLH130-like [Vitis vinifera]
Length = 405
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD + Y++ LQ Q
Sbjct: 321 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 380
Query: 243 VEFLS 247
L+
Sbjct: 381 YNTLT 385
>gi|222623841|gb|EEE57973.1| hypothetical protein OsJ_08713 [Oryza sativa Japonica Group]
Length = 432
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 23/80 (28%)
Query: 191 TDSHSLAERV----------------------RREKISERMKILQKLVPGCDKVTGKAFM 228
TD HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 229 LDEIINYVQFLQNQVEFLSM 248
LDEII+YV+FLQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|23495742|dbj|BAC19953.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
gi|24059945|dbj|BAC21408.1| transcription factor BHLH9-like protein [Oryza sativa Japonica
Group]
Length = 417
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T KA
Sbjct: 206 DSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDKA 264
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD-------FGMDLDNTFMVRPDDQ-QNL 278
+LDE I Y++ LQ QV+ + M V MF GM L+ M P Q Q L
Sbjct: 265 SILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACM--PGAQAQGL 322
Query: 279 NSI 281
N +
Sbjct: 323 NQM 325
>gi|223702406|gb|ACN21634.1| putative basic helix-loop-helix protein BHLH10 [Lotus japonicus]
Length = 338
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R+ RG ATD S+ R RREKI+ER+KILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 247 RSERGSATDPQSIYARRRREKINERLKILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQI 305
Query: 244 EFLSM-KLASVNPMFY---DFGMDLD 265
+ LS L P+ + + G+DL+
Sbjct: 306 KLLSSDDLWMYAPIAFNGMNIGLDLN 331
>gi|147789805|emb|CAN62935.1| hypothetical protein VITISV_008845 [Vitis vinifera]
Length = 394
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD + Y++ LQ Q
Sbjct: 310 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 369
Query: 243 VEFLS 247
L+
Sbjct: 370 YNTLT 374
>gi|302781847|ref|XP_002972697.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
gi|300159298|gb|EFJ25918.1| hypothetical protein SELMODRAFT_413232 [Selaginella moellendorffii]
Length = 442
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV ML++ INYV+FLQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKV-DLVTMLEKAINYVKFLQLQV 417
Query: 244 EFLS 247
+ L+
Sbjct: 418 KVLT 421
>gi|218188008|gb|EEC70435.1| hypothetical protein OsI_01449 [Oryza sativa Indica Group]
Length = 693
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 437 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 495
Query: 246 LSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 496 MSMGTGLCIPPMLLPTAM 513
>gi|414877117|tpg|DAA54248.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 567
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 349 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 407
Query: 246 LSMKLA-SVNPMFYDFGMDL 264
++M + PM M L
Sbjct: 408 MAMGSGLCIPPMLLPRAMQL 427
>gi|374412422|gb|AEZ49169.1| helix-loop-helix DNA-binding domain containing protein [Wolffia
australiana]
Length = 368
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R ++++ H+L+ER RR++I+E+M+ LQ+LVP C+K KA ML+E+I Y++ LQ QV+
Sbjct: 217 KRSRSSEVHNLSERRRRDRINEKMRALQELVPCCNKQVDKASMLEEVIEYLKSLQMQVQA 276
Query: 246 LSMKLASVNPMFY 258
+SM + PM
Sbjct: 277 MSM--GYMRPMML 287
>gi|359744468|gb|AEV57494.1| rice phytochrome-interacting factor 4 [Oryza sativa Japonica Group]
Length = 414
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T K
Sbjct: 202 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 260
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD-------FGMDLDNTFMVRPDDQ-QN 277
A +LDE I Y++ LQ QV+ + M V MF GM L+ M P Q Q
Sbjct: 261 ASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACM--PGAQAQG 318
Query: 278 LNSI 281
LN +
Sbjct: 319 LNQM 322
>gi|222635086|gb|EEE65218.1| hypothetical protein OsJ_20364 [Oryza sativa Japonica Group]
Length = 352
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+R+RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LSM
Sbjct: 151 QRLRRERIAERMKSLQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSM 200
>gi|242037911|ref|XP_002466350.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
gi|241920204|gb|EER93348.1| hypothetical protein SORBIDRAFT_01g006190 [Sorghum bicolor]
Length = 424
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 54/77 (70%), Gaps = 2/77 (2%)
Query: 182 HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
H RR +A + H+L+ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ
Sbjct: 223 HGPKRRTRAAEVHNLSERRRRDRINEKMRALQELIPHCNK-TDKASILDETIEYLKSLQM 281
Query: 242 QVEFLSMKLASVNPMFY 258
QV+ + M + + PM +
Sbjct: 282 QVQIMWMT-SGMAPMMF 297
>gi|124360931|gb|ABN08903.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 484
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 5/127 (3%)
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S+ S++P V ++ + EE E S D E AK K+ +R +A
Sbjct: 203 GSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAK---KNISGSSTKRSRA 259
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKL 250
+ H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I+Y++ LQ QV+ +SM
Sbjct: 260 AEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQMMSMGC 318
Query: 251 ASVNPMF 257
V MF
Sbjct: 319 GMVPMMF 325
>gi|222618221|gb|EEE54353.1| hypothetical protein OsJ_01348 [Oryza sativa Japonica Group]
Length = 705
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 449 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 507
Query: 246 LSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 508 MSMGTGLCIPPMLLPTAM 525
>gi|414590534|tpg|DAA41105.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 391
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP DK T + MLD ++Y++ LQ Q
Sbjct: 288 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMDKQTNTSDMLDLAVDYIKELQKQ 347
Query: 243 VE 244
V+
Sbjct: 348 VK 349
>gi|115455729|ref|NP_001051465.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|108711401|gb|ABF99196.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108711403|gb|ABF99198.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113549936|dbj|BAF13379.1| Os03g0782500 [Oryza sativa Japonica Group]
gi|215740666|dbj|BAG97322.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 410
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 139 PREVKSKKQKKGNVN-DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
P E S ++KG + D++ E+ E +A E K + + RR +A + H+L+
Sbjct: 176 PSESASAHKRKGREDSDSRSEDAEC--EATEETKSSSR-----RYGSKRRTRAAEVHNLS 228
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ QV+ + M + PM
Sbjct: 229 ERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWMTTG-MAPMM 286
Query: 258 Y 258
+
Sbjct: 287 F 287
>gi|218193849|gb|EEC76276.1| hypothetical protein OsI_13762 [Oryza sativa Indica Group]
Length = 505
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 9/120 (7%)
Query: 139 PREVKSKKQKKGNVN-DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
P E S ++KG + D++ E+ E +A E K + + RR +A + H+L+
Sbjct: 292 PSESASAHKRKGREDSDSRSEDAEC--EATEETKSSSR-----RYGSKRRTRAAEVHNLS 344
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ QV+ + M MF
Sbjct: 345 ERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWMTTGMAPMMF 403
>gi|297736219|emb|CBI24857.3| unnamed protein product [Vitis vinifera]
Length = 246
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+L P DK T A MLD + Y++ LQ Q
Sbjct: 171 IRAKRGCATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEYIKDLQKQ 230
Query: 243 VEFL 246
V+ L
Sbjct: 231 VKTL 234
>gi|224066527|ref|XP_002302124.1| predicted protein [Populus trichocarpa]
gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 154 DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ 213
DA++ E + S A+ + VA +P K RR +A + H+L+ER RR++I+E+M+ LQ
Sbjct: 2 DAEESECQ-SEDAELDSAVANKPAKR--SGSTRRSRAAEVHNLSERRRRDRINEKMRALQ 58
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
+L+P C+K T KA MLDE I Y++ LQ Q++ + M V MF
Sbjct: 59 ELIPHCNK-TDKASMLDEAIEYLKSLQLQLQVMWMGSGIVPVMF 101
>gi|222625912|gb|EEE60044.1| hypothetical protein OsJ_12829 [Oryza sativa Japonica Group]
Length = 489
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 139 PREVKSKKQKKGNVN-DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
P E S ++KG + D++ E+ E +A E K + + RR +A + H+L+
Sbjct: 276 PSESASAHKRKGREDSDSRSEDAEC--EATEETKSSSR-----RYGSKRRTRAAEVHNLS 328
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ QV+ + M + PM
Sbjct: 329 ERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWMT-TGMAPMM 386
Query: 258 Y 258
+
Sbjct: 387 F 387
>gi|108711402|gb|ABF99197.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 421
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 10/121 (8%)
Query: 139 PREVKSKKQKKGNVN-DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLA 197
P E S ++KG + D++ E+ E +A E K + + RR +A + H+L+
Sbjct: 187 PSESASAHKRKGREDSDSRSEDAEC--EATEETKSSSR-----RYGSKRRTRAAEVHNLS 239
Query: 198 ERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMF 257
ER RR++I+E+M+ LQ+L+P C+K T KA +LDE I Y++ LQ QV+ + M + PM
Sbjct: 240 ERRRRDRINEKMRALQELIPHCNK-TDKASILDEAIEYLKSLQMQVQIMWMTTG-MAPMM 297
Query: 258 Y 258
+
Sbjct: 298 F 298
>gi|297739719|emb|CBI29901.3| unnamed protein product [Vitis vinifera]
Length = 280
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T A MLD + Y++ LQ Q
Sbjct: 196 IRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQKQ 255
Query: 243 VEFLS 247
L+
Sbjct: 256 YNTLT 260
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
gi|297329781|gb|EFH60200.1| hypothetical protein ARALYDRAFT_319546 [Arabidopsis lyrata subsp.
lyrata]
Length = 486
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%), Gaps = 1/63 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+ER RR++I+ERMK LQ+L+P C+K + KA MLDE I Y++ LQ Q++
Sbjct: 290 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQV 348
Query: 246 LSM 248
+SM
Sbjct: 349 MSM 351
>gi|47497022|dbj|BAD19075.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
gi|47497231|dbj|BAD19276.1| basic helix-loop-helix (bHLH) -like [Oryza sativa Japonica Group]
Length = 463
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 49/80 (61%), Gaps = 23/80 (28%)
Query: 191 TDSHSLAERV----------------------RREKISERMKILQKLVPGCDKVTGKAFM 228
TD HS+AERV RRE+I+ERMK LQ+LVP +K T KA M
Sbjct: 220 TDPHSIAERVYHSPTTFPFSPPFFIASMPCCLRRERIAERMKALQELVPNANK-TDKASM 278
Query: 229 LDEIINYVQFLQNQVEFLSM 248
LDEII+YV+FLQ QV+ LSM
Sbjct: 279 LDEIIDYVKFLQLQVKVLSM 298
>gi|125558995|gb|EAZ04531.1| hypothetical protein OsI_26681 [Oryza sativa Indica Group]
Length = 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P + RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E +
Sbjct: 179 KPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQ 237
Query: 235 YVQFLQNQVEFLS 247
YV+FLQ Q++ LS
Sbjct: 238 YVKFLQLQIKLLS 250
>gi|414877115|tpg|DAA54246.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 377
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 159 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 217
Query: 246 LSMKLA-SVNPMFYDFGMDL 264
++M + PM M L
Sbjct: 218 MAMGSGLCIPPMLLPRAMQL 237
>gi|356574311|ref|XP_003555292.1| PREDICTED: transcription factor bHLH85-like [Glycine max]
Length = 358
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 114 TTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVA 173
T+R K RKN +AS+S +D R + + Q+ + P + + A
Sbjct: 201 TSRNAKSRKNSKSASTS----NDEDDRSLSLQVQRNNSCFSQSDSNAYLEPNGGASKDPA 256
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
PP RA A D SL R RRE+I+ER++ILQ LVP KV + ML+E +
Sbjct: 257 --PPNLDRKSRATTSAAADPQSLYARKRRERINERLRILQNLVPNGTKV-DISTMLEEAV 313
Query: 234 NYVQFLQNQVEFLSMK-LASVNPMFY---DFGMDL 264
YV+FLQ Q++ LS + L P+ Y + G+DL
Sbjct: 314 QYVKFLQLQIKLLSSEDLWMYAPIVYNGINIGLDL 348
>gi|34393609|dbj|BAC83262.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|50509377|dbj|BAD30932.1| transcription factor (bHLH)-like protein [Oryza sativa Japonica
Group]
gi|125600907|gb|EAZ40483.1| hypothetical protein OsJ_24937 [Oryza sativa Japonica Group]
Length = 279
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P + RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E +
Sbjct: 179 KPSSKKMGTRANRGAATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVQ 237
Query: 235 YVQFLQNQVEFLS 247
YV+FLQ Q++ LS
Sbjct: 238 YVKFLQLQIKLLS 250
>gi|302788881|ref|XP_002976209.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
gi|300155839|gb|EFJ22469.1| hypothetical protein SELMODRAFT_443113 [Selaginella moellendorffii]
Length = 512
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 48/70 (68%), Gaps = 6/70 (8%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV------TGKAFMLDEIINYV 236
+RA+RG AT S+AERVRR +ISERM+ LQ+LVP DK T + MLDE + Y+
Sbjct: 416 LRAKRGCATHPRSIAERVRRTRISERMRRLQELVPNMDKSLAVIQQTNTSDMLDEAVEYM 475
Query: 237 QFLQNQVEFL 246
+FLQ QV+ L
Sbjct: 476 KFLQKQVDDL 485
>gi|224053374|ref|XP_002297788.1| predicted protein [Populus trichocarpa]
gi|222845046|gb|EEE82593.1| predicted protein [Populus trichocarpa]
Length = 111
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RG AT S+AERVRR +ISERM+ LQ LVP DK T + MLD ++Y++ LQ QV
Sbjct: 33 RAKRGCATHPRSIAERVRRTRISERMRKLQDLVPNMDKQTNTSDMLDLAVDYIKDLQRQV 92
Query: 244 EFLS 247
+ LS
Sbjct: 93 QTLS 96
>gi|15217533|ref|NP_172424.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|30681206|ref|NP_849626.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|20532207|sp|O80536.1|PIF3_ARATH RecName: Full=Transcription factor PIF3; AltName: Full=Basic
helix-loop-helix protein 8; Short=AtbHLH8; Short=bHLH 8;
AltName: Full=Phytochrome-associated protein 3; AltName:
Full=Phytochrome-interacting factor 3; AltName:
Full=Transcription factor EN 100; AltName: Full=bHLH
transcription factor bHLH008
gi|18026964|gb|AAL55715.1|AF251693_1 putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|3482928|gb|AAC33213.1| Unknown protein [Arabidopsis thaliana]
gi|3929586|gb|AAC95156.1| phytochrome interacting factor 3 [Arabidopsis thaliana]
gi|26449609|dbj|BAC41930.1| putative transcription factor BHLH8 [Arabidopsis thaliana]
gi|332190336|gb|AEE28457.1| transcription factor PIF3 [Arabidopsis thaliana]
gi|332190337|gb|AEE28458.1| transcription factor PIF3 [Arabidopsis thaliana]
Length = 524
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
KE + ++R ++ + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I
Sbjct: 328 KEAGPSRTGLGSKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAI 386
Query: 234 NYVQFLQNQVEFLSM 248
Y++ LQ QV+ +SM
Sbjct: 387 EYLKSLQLQVQIMSM 401
>gi|255544250|ref|XP_002513187.1| DNA binding protein, putative [Ricinus communis]
gi|223547685|gb|EEF49178.1| DNA binding protein, putative [Ricinus communis]
Length = 432
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 44/64 (68%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ L P DK T A MLD + Y++ LQ Q
Sbjct: 350 IRAKRGFATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTADMLDLAVEYIKDLQKQ 409
Query: 243 VEFL 246
V+ L
Sbjct: 410 VKTL 413
>gi|357159056|ref|XP_003578325.1| PREDICTED: transcription factor bHLH130-like [Brachypodium
distachyon]
Length = 409
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ Q
Sbjct: 327 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 386
Query: 243 VEFL 246
V+ +
Sbjct: 387 VKVM 390
>gi|357128032|ref|XP_003565680.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF3-like
[Brachypodium distachyon]
Length = 614
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 2/78 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA MLDE I Y++ LQ QV+
Sbjct: 402 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLDEAIEYLKTLQLQVQM 460
Query: 246 LSMKLA-SVNPMFYDFGM 262
+SM + PM M
Sbjct: 461 MSMGTGLCIPPMLLPPAM 478
>gi|297606720|ref|NP_001058876.2| Os07g0143200 [Oryza sativa Japonica Group]
gi|255677508|dbj|BAF20790.2| Os07g0143200 [Oryza sativa Japonica Group]
Length = 447
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 11/124 (8%)
Query: 166 ADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGK 225
DS +VA E RR +A + H+L+ER RR++I+E+++ LQ+LVP C+K T K
Sbjct: 206 VDSLSEVADETRPSKRPAAKRRTRAAEVHNLSERRRRDRINEKLRALQELVPHCNK-TDK 264
Query: 226 AFMLDEIINYVQFLQNQVEFLSMKLASVNPMFYD-------FGMDLDNTFMVRPDDQ-QN 277
A +LDE I Y++ LQ QV+ + M V MF GM L+ M P Q Q
Sbjct: 265 ASILDEAIEYLKSLQMQVQIMWMTTGIVPMMFPGTHQLMPPMGMGLNTACM--PGAQAQG 322
Query: 278 LNSI 281
LN +
Sbjct: 323 LNQM 326
>gi|218187227|gb|EEC69654.1| hypothetical protein OsI_39066 [Oryza sativa Indica Group]
Length = 469
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Query: 125 TNASSSFNS---AQSKDPREVKS-----KKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
T ASSS S A +PR+V + K++++G A E S + E A
Sbjct: 210 TVASSSMRSRSCAAKTEPRDVAAAGAGGKRKQRGA---AAMESGSPSEDVEFESAAATCS 266
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P RR +A + H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y+
Sbjct: 267 PAQKTTTAKRR-RAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYL 324
Query: 237 QFLQNQVEFLSM 248
+ LQ Q++ + M
Sbjct: 325 KSLQLQLQMMWM 336
>gi|357457619|ref|XP_003599090.1| DNA binding protein [Medicago truncatula]
gi|355488138|gb|AES69341.1| DNA binding protein [Medicago truncatula]
Length = 403
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +IS+R+K LQ L P DK T A MLD + Y++ LQ Q
Sbjct: 319 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 378
Query: 243 VEFLS 247
V+ L+
Sbjct: 379 VQILT 383
>gi|242084064|ref|XP_002442457.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
gi|241943150|gb|EES16295.1| hypothetical protein SORBIDRAFT_08g020290 [Sorghum bicolor]
Length = 353
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 51/74 (68%), Gaps = 3/74 (4%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+RR + H+L E+ RR KI+ER+K LQKLVPGC K + +A LD+ I+Y++ LQ QV+
Sbjct: 188 SRRSHHGEGHNLTEKRRRHKINERLKTLQKLVPGCSK-SNQASTLDQTIHYMKSLQQQVQ 246
Query: 245 FLSMKLASVNPMFY 258
+S+ LA+ P Y
Sbjct: 247 AMSVGLAA--PAVY 258
>gi|388503832|gb|AFK39982.1| unknown [Medicago truncatula]
Length = 406
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +IS+R+K LQ L P DK T A MLD + Y++ LQ Q
Sbjct: 322 IRAKRGFATHPRSIAERVRRTRISDRIKKLQGLFPKSDKQTSTADMLDLAVEYIKDLQEQ 381
Query: 243 VEFLS 247
V+ L+
Sbjct: 382 VQILT 386
>gi|357437591|ref|XP_003589071.1| Transcription factor bHLH85 [Medicago truncatula]
gi|357437635|ref|XP_003589093.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478119|gb|AES59322.1| Transcription factor bHLH85 [Medicago truncatula]
gi|355478141|gb|AES59344.1| Transcription factor bHLH85 [Medicago truncatula]
Length = 375
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER+++LQ LVP KV + ML+E +NYV+FLQ Q+
Sbjct: 275 RASRGSATDPQSLYARKRRERINERLRVLQNLVPNGTKVD-ISTMLEEAVNYVKFLQTQI 333
Query: 244 EFLSMKLASVNPMFYDFGMDLDNTFMVRP 272
K+ ++ + Y + D+ +M P
Sbjct: 334 -----KVCTIGDIIY--LLSSDDMWMYAP 355
>gi|115489518|ref|NP_001067246.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|77556567|gb|ABA99363.1| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|108862946|gb|ABA99364.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
gi|113649753|dbj|BAF30265.1| Os12g0610200 [Oryza sativa Japonica Group]
gi|125537356|gb|EAY83844.1| hypothetical protein OsI_39060 [Oryza sativa Indica Group]
gi|215694924|dbj|BAG90115.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 125 TNASSSFNS---AQSKDPREVKS-----KKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
T ASSS S +PR+V + K++++G A E S + E A
Sbjct: 201 TVASSSMRSRSCTAKAEPRDVAAAGVGGKRKQRGG---AAMESGSPSEDVEFESAAATCS 257
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P RR +A + H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y+
Sbjct: 258 PAQKTTTAKRR-RAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYL 315
Query: 237 QFLQNQVEFLSMKLASVNP--MFYDFGM 262
+ LQ Q++ + M P MF G+
Sbjct: 316 KSLQLQLQMMWMGGGMAPPAVMFPAAGV 343
>gi|326511035|dbj|BAJ91865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 165 KADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTG 224
+ DSE+ + + R +R +A + H+L+E+ RR KI+E+MK LQ LVP K T
Sbjct: 26 RGDSEEALGSSESEPAGRPRGKRARAAEVHNLSEKRRRCKINEKMKALQSLVPNSSK-TD 84
Query: 225 KAFMLDEIINYVQFLQNQVEFLSMK 249
KA MLD+ I Y++ LQ QV+ LSM+
Sbjct: 85 KASMLDDAIEYLKHLQLQVQMLSMR 109
>gi|108862947|gb|ABA99362.2| Helix-loop-helix DNA-binding domain containing protein, expressed
[Oryza sativa Japonica Group]
Length = 446
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 125 TNASSSFNS---AQSKDPREVKS-----KKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
T ASSS S +PR+V + K++++G A E S + E A
Sbjct: 201 TVASSSMRSRSCTAKAEPRDVAAAGVGGKRKQRGG---AAMESGSPSEDVEFESAAATCS 257
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
P RR +A + H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y+
Sbjct: 258 PAQKTTTAKRR-RAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYL 315
Query: 237 QFLQNQVEFLSMKLASVNP--MFYDFGM 262
+ LQ Q++ + M P MF G+
Sbjct: 316 KSLQLQLQMMWMGGGMAPPAVMFPAAGV 343
>gi|242084066|ref|XP_002442458.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
gi|241943151|gb|EES16296.1| hypothetical protein SORBIDRAFT_08g020300 [Sorghum bicolor]
Length = 340
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 84/194 (43%), Gaps = 47/194 (24%)
Query: 145 KKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREK 204
KKQK EE +P S R+ G+A H+L E+ RR K
Sbjct: 137 KKQKVTPEGKMGTEEMRKAPAGGSS--------------RSHHGEA---HNLTEKRRRHK 179
Query: 205 ISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLAS------------ 252
I+ER+K LQ+LVPGC K + +A LD+ I+Y++ LQ+QV+ +S+ LAS
Sbjct: 180 INERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQHQVQAMSVGLASPAVYPVVQPQCV 238
Query: 253 -----------VNPMFYDFGMDLDNTFMVRP--DDQQNLNSIIAASASAPQVQCSPTAQL 299
PMF G +T M+ P L A + P +P
Sbjct: 239 PPATPVAMPFPAAPMF--LGGHPPSTTMMVPFGTTMIPLPHYPAGAVMMPGAAVAPL--Y 294
Query: 300 TAFADTTTAFAPAD 313
A A TTTA AP D
Sbjct: 295 PASAPTTTAVAPGD 308
>gi|357161826|ref|XP_003579215.1| PREDICTED: transcription factor bHLH139-like [Brachypodium
distachyon]
Length = 301
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 134 AQSKDPREVKSKKQKKGNVNDAKKEEKENSP-KADSEQKVAKEPPKDYI----HVRARRG 188
A+ +P+ K KQ V A + S +D + ++E + RA RG
Sbjct: 161 ARKAEPKRTKKTKQSGWEVAVATRNGSTASCCTSDDDSNASQESADTGVCPKGKARAARG 220
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+TD SL R RRE+I+ER+K LQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 221 ASTDPQSLYARKRRERINERLKTLQTLVPNGTKVD-MSTMLEEAVHYVKFLQLQIKVLSS 279
Query: 249 -KLASVNPMFY---DFGMDLD 265
+ P+ Y + G+DL+
Sbjct: 280 DDMWMYAPLAYNGMNIGLDLN 300
>gi|326503832|dbj|BAK02702.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 407
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR KISER++ LQ+LVP +K T + MLD ++Y++ LQ Q
Sbjct: 324 IRAKRGCATHPRSIAERVRRTKISERIRKLQELVPNMEKQTNTSDMLDLAVDYIKELQMQ 383
Query: 243 VEFL 246
V+ +
Sbjct: 384 VKVM 387
>gi|4093153|gb|AAC99771.1| phytochrome-associated protein 3 [Arabidopsis thaliana]
Length = 524
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 174 KEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEII 233
KE + ++R + + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I
Sbjct: 328 KEAGPSRTGLGSKRSRLAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAI 386
Query: 234 NYVQFLQNQVEFLSM 248
Y++ LQ QV+ +SM
Sbjct: 387 EYLKSLQLQVQIMSM 401
>gi|326519825|dbj|BAK00285.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK T + MLD ++Y++ LQ+Q
Sbjct: 300 VRAKRGCATHPRSIAERERRTRISKRLRRLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 359
Query: 243 VEFL 246
+E L
Sbjct: 360 IEKL 363
>gi|289540888|gb|ADD09565.1| unknown [Trifolium repens]
Length = 290
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RREKI+ER++ LQ LVP KV + ML++ I+YV+FLQ Q
Sbjct: 198 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVD-ISTMLEDAIHYVKFLQLQ 256
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLD 265
++ LS + P+ Y D G++L+
Sbjct: 257 IKLLSSDDMWMYAPIAYNGLDIGVNLN 283
>gi|31043851|emb|CAD32238.1| BP-5 protein [Oryza sativa]
Length = 335
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ--KLVPGCDKVTGKAFML 229
VA++PP ARR +A + H+L+ER RR++I+E+M+ LQ +L+P C+K T KA ML
Sbjct: 151 VARKPPAKMTT--ARRSRAAEVHNLSERRRRDRINEKMRALQELELIPHCNK-TDKASML 207
Query: 230 DEIINYVQFLQNQVEFLSMKLASVNPMFY 258
DE I Y++ LQ Q+ + M P+ +
Sbjct: 208 DEAIEYLKSLQLQLRVMWMGSGMAPPLMF 236
>gi|289540905|gb|ADD09579.1| unknown [Trifolium repens]
Length = 276
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%), Gaps = 5/87 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RA RG ATD SL R RREKI+ER++ LQ LVP KV + ML++ I+YV+FLQ Q
Sbjct: 184 ARANRGSATDPQSLYARKRREKINERLRTLQNLVPNGTKVD-ISTMLEDAIHYVKFLQLQ 242
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLD 265
++ LS + P+ Y D G++L+
Sbjct: 243 IKLLSSDDMWMYAPIAYNGLDIGVNLN 269
>gi|226510391|ref|NP_001150862.1| LOC100284495 [Zea mays]
gi|195642440|gb|ACG40688.1| helix-loop-helix DNA-binding domain containing protein [Zea mays]
Length = 359
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRARRG AT S+AER RR +IS+R+K LQ LVP DK T + MLD ++Y++ L++Q
Sbjct: 280 VRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDQ 339
Query: 243 VEFL 246
VE L
Sbjct: 340 VEKL 343
>gi|357126351|ref|XP_003564851.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 373
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +IS+R++ LQ LVP DK T + MLD ++Y++ LQ+Q
Sbjct: 295 VRAKRGCATHPRSIAERERRTRISKRLRKLQDLVPNMDKQTNTSDMLDIAVDYIKVLQDQ 354
Query: 243 VEFL 246
+E L
Sbjct: 355 IEKL 358
>gi|224106043|ref|XP_002314023.1| predicted protein [Populus trichocarpa]
gi|222850431|gb|EEE87978.1| predicted protein [Populus trichocarpa]
Length = 421
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+L P DK T A MLD + +++ LQ Q
Sbjct: 337 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPNMDKQTNTADMLDLAVEHIKDLQKQ 396
Query: 243 VEFLS 247
V+ L+
Sbjct: 397 VKTLT 401
>gi|18396475|ref|NP_564293.1| transcription factor bHLH54 [Arabidopsis thaliana]
gi|75301354|sp|Q8LEG1.1|BH054_ARATH RecName: Full=Transcription factor bHLH54; AltName: Full=Basic
helix-loop-helix protein 54; Short=AtbHLH54; Short=bHLH
54; AltName: Full=Transcription factor EN 114; AltName:
Full=bHLH transcription factor bHLH054
gi|21553570|gb|AAM62663.1| unknown [Arabidopsis thaliana]
gi|225897974|dbj|BAH30319.1| hypothetical protein [Arabidopsis thaliana]
gi|332192750|gb|AEE30871.1| transcription factor bHLH54 [Arabidopsis thaliana]
Length = 258
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA +G ATD SL R RREKI+ER+K LQ LVP KV + ML+E ++YV+FLQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ G+D+
Sbjct: 227 KLLSSDDLWMYAPLAYN-GLDM 247
>gi|357119457|ref|XP_003561456.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 334
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 9/113 (7%)
Query: 146 KQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKI 205
K+ + ++D++ E+ ++ D E + ++ P RR +A + H+ +ER RR++I
Sbjct: 107 KRGRDELDDSRCEDADDCEAVD-ETRTSRRP------AGKRRARAAEVHNQSERRRRDRI 159
Query: 206 SERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
+E+MK LQ+LVP C+K + KA +LDE I Y++ LQ QV+ + M + PM +
Sbjct: 160 NEKMKALQELVPHCNK-SDKASILDEAIEYLKSLQLQVQIMWMT-TGMAPMMF 210
>gi|356525636|ref|XP_003531430.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 450
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISER+K LQ L P +K T A MLD + Y++ LQ +
Sbjct: 366 IRAKRGFATHPRSIAERVRRTRISERIKKLQDLFPKSEKQTSTADMLDLAVEYIKDLQQK 425
Query: 243 VEFLS 247
V+ LS
Sbjct: 426 VKILS 430
>gi|297845732|ref|XP_002890747.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336589|gb|EFH67006.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA +G ATD SL R RREKI+ER+K LQ LVP KV + ML+E ++YV+FLQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 244 EFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ G+D+
Sbjct: 227 KLLSSDDLWMYAPLAYN-GLDM 247
>gi|357113061|ref|XP_003558323.1| PREDICTED: transcription factor PIF5-like [Brachypodium distachyon]
Length = 418
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
+ S+ G+ + + +S D+E + +E H RR +A + H+ +ER R
Sbjct: 188 LPSESTHGGHKRKGRGRDDSDSRSEDAEFEATEETKSSRRHGSKRRSRAAEVHNQSERRR 247
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
R++I+E+M+ LQ+L+P C+K KA +LDE I Y++ LQ Q++ + M + PM +
Sbjct: 248 RDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQMQLQIMWMTTG-MAPMMF 302
>gi|302759440|ref|XP_002963143.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
gi|300170004|gb|EFJ36606.1| hypothetical protein SELMODRAFT_404767 [Selaginella moellendorffii]
Length = 302
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RG ATD S+ R RRE+I+ER+K LQ LVP KV ML+E I+YV+FLQ QV
Sbjct: 212 RAKRGSATDPQSVYARHRRERINERLKTLQHLVPNGAKV-DIVTMLEEAIHYVKFLQLQV 270
Query: 244 EFLS 247
LS
Sbjct: 271 NMLS 274
>gi|224082612|ref|XP_002306764.1| predicted protein [Populus trichocarpa]
gi|222856213|gb|EEE93760.1| predicted protein [Populus trichocarpa]
Length = 380
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
Query: 144 SKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRRE 203
S QK+ ++ E + + + D + P K R R +A + H+L+ER RR+
Sbjct: 143 SSSQKRKTIDTEDSEYQSEAAELDLDSMAGNNPTKRSGSTR--RSRAAEVHNLSERRRRD 200
Query: 204 KISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
+I+E+M+ LQ+L+P C K T KA MLDE I Y++ LQ Q++ + M + PM +
Sbjct: 201 RINEKMRALQELIPHCYK-TDKASMLDEAIEYLKSLQLQLQVMWMG-GGMAPMLF 253
>gi|413917616|gb|AFW57548.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 505
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 11/94 (11%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R + + H+L+ER RR++I+E+M+ LQ+L+P C+KV K+ ML+E I Y++ LQ QV+
Sbjct: 318 AKRCRTAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KSSMLEEAIEYLKTLQLQVQ 376
Query: 245 FLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNL 278
+SM G+ + M+ P QQ L
Sbjct: 377 MMSMGT----------GLCMPPAAMLLPAMQQQL 400
>gi|302812823|ref|XP_002988098.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
gi|300144204|gb|EFJ10890.1| hypothetical protein SELMODRAFT_426794 [Selaginella moellendorffii]
Length = 422
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RAR+G A D S+A R RRE+IS+R+KILQ+LVP KV ML++ INYV+FLQ QV
Sbjct: 359 RARQGSANDPQSIAARHRRERISDRLKILQELVPNSTKVD-LVTMLEKAINYVKFLQLQV 417
Query: 244 EF 245
+
Sbjct: 418 KV 419
>gi|449436269|ref|XP_004135915.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
gi|449521930|ref|XP_004167982.1| PREDICTED: transcription factor bHLH130-like [Cucumis sativus]
Length = 419
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AER+RR +ISER+K LQ+L P DK T A ML+ + Y++ LQ Q
Sbjct: 342 IRAKRGCATHPRSIAERMRRTRISERIKKLQELFPDMDKQTSTADMLELAVEYIKGLQRQ 401
Query: 243 VEFLS 247
V+ L+
Sbjct: 402 VKTLT 406
>gi|414879181|tpg|DAA56312.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 231
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 45/66 (68%)
Query: 181 IHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQ 240
VRARRG AT S+AER RR +IS+R+K LQ LVP DK T + MLD + Y++ L+
Sbjct: 150 CRVRARRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVEYIKELK 209
Query: 241 NQVEFL 246
+QVE L
Sbjct: 210 DQVEKL 215
>gi|449448502|ref|XP_004142005.1| PREDICTED: uncharacterized protein LOC101217594 [Cucumis sativus]
Length = 406
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 6/107 (5%)
Query: 151 NVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMK 210
N ND E E +A E+ K P+ ++R +A + H+L+E+ RR +I+E+MK
Sbjct: 140 NENDEFDCESEEGLEALVEELPTKPNPRS----SSKRSRAAEVHNLSEKRRRSRINEKMK 195
Query: 211 ILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPM 256
LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+ S++PM
Sbjct: 196 ALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPM 241
>gi|302795837|ref|XP_002979681.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
gi|300152441|gb|EFJ19083.1| hypothetical protein SELMODRAFT_419388 [Selaginella moellendorffii]
Length = 335
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA+RG ATD S+ R RRE+I+ER++ LQ LVP KV ML+E INYV+FLQ Q+
Sbjct: 238 RAKRGSATDPQSIYARQRRERINERLRALQGLVPNGAKVD-IVTMLEEAINYVKFLQLQL 296
Query: 244 ----EFLSMKLASVNPMFYDFGMDLD 265
E+ + N M GM L+
Sbjct: 297 LSSDEYWMYAPTNYNGMNISLGMHLN 322
>gi|449485549|ref|XP_004157205.1| PREDICTED: uncharacterized protein LOC101227644 [Cucumis sativus]
Length = 415
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 2/89 (2%)
Query: 169 EQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
E V + P K ++R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA M
Sbjct: 154 EALVEELPTKPNPRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASM 212
Query: 229 LDEIINYVQFLQNQVEFLSMKLA-SVNPM 256
LDE I Y++ LQ QV+ LSM+ S++PM
Sbjct: 213 LDEAIEYLKQLQLQVQMLSMRNGLSLHPM 241
>gi|255538250|ref|XP_002510190.1| conserved hypothetical protein [Ricinus communis]
gi|223550891|gb|EEF52377.1| conserved hypothetical protein [Ricinus communis]
Length = 312
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 166 ADSEQKV-AKEPPKDYIHVR--ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV 222
DSE+ E P + + R ++R +A + H+L+E+ RR +I+E+MK LQ L+P +K
Sbjct: 99 CDSEKGAEVAEVPSETVRPRNSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK- 157
Query: 223 TGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPM 256
T KA MLDE I Y++ LQ QV+ L+M+ S++PM
Sbjct: 158 TDKASMLDEAIEYLKQLQLQVQMLTMRNGLSLHPM 192
>gi|359480799|ref|XP_002277966.2| PREDICTED: uncharacterized protein LOC100245665 [Vitis vinifera]
gi|296082405|emb|CBI21410.3| unnamed protein product [Vitis vinifera]
Length = 394
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 159 EKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
E E +A E+ K P + ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 112 ESEEGLEALVEEVATKAAP---LRSSSKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPN 168
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPM 256
+K T KA MLDE I Y++ LQ QV+ LSM+ S++PM
Sbjct: 169 SNK-TDKASMLDEAIEYLKQLQLQVQMLSMRNGLSLHPM 206
>gi|452030238|gb|AGF92088.1| indehiscent-like protein [Phaseolus vulgaris]
Length = 282
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL-SMKL 250
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L S+
Sbjct: 146 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLLQSISH 204
Query: 251 ASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQLTAFADTTTAFA 310
S P F NT ++ P + AP V S TA A A +++
Sbjct: 205 PSQPPQCIGFATTNANTLLLAPSCDWSF---------APNVLLSSTAVTAATASSSSLDM 255
Query: 311 PA 312
P
Sbjct: 256 PG 257
>gi|449475553|ref|XP_004154488.1| PREDICTED: transcription factor bHLH82-like [Cucumis sativus]
Length = 173
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 22/110 (20%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV-------TGKAFMLDEIINYVQF 238
+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K+ T KA MLDE I Y++
Sbjct: 55 KRSRAAEVHNLSERRRRDRINEKMKALQELIPRCNKLSSFTDSQTDKASMLDEAIEYLKT 114
Query: 239 LQNQVEFL---SMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAAS 285
LQ QV+ S+ + V+ M+ D DD ++I+A S
Sbjct: 115 LQLQVQIFVLNSLHIHDVDGMWND------------ADDGSGCSAILATS 152
>gi|297605234|ref|NP_001056902.2| Os06g0164400 [Oryza sativa Japonica Group]
gi|255676746|dbj|BAF18816.2| Os06g0164400, partial [Oryza sativa Japonica Group]
Length = 188
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 22 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 80
Query: 245 FLSMK-LASVNPMFYDFGMD 263
LSM+ +NP + ++
Sbjct: 81 MLSMRNGVYLNPSYLSGALE 100
>gi|222619693|gb|EEE55825.1| hypothetical protein OsJ_04431 [Oryza sativa Japonica Group]
Length = 171
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P RA+RG AT S+AER RR +IS+R+K LQ LVP DK T + MLD +
Sbjct: 85 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 144
Query: 235 YVQFLQNQVEFL 246
Y++ LQ QVE L
Sbjct: 145 YIKELQGQVEKL 156
>gi|413924221|gb|AFW64153.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 230
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 47/62 (75%), Gaps = 5/62 (8%)
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM----KLASVN 254
++RRE+I+ERMK LQ+LVP +K T KA MLDEII+YV+FLQ QV+ LSM A+V
Sbjct: 140 QLRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVG 198
Query: 255 PM 256
P+
Sbjct: 199 PL 200
>gi|255541166|ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
gi|223548827|gb|EEF50316.1| DNA binding protein, putative [Ricinus communis]
Length = 465
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 29/142 (20%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 277 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 335
Query: 243 VEFLS----------------MKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASA 286
V+ +S ++++ + PM + GM L M + ++N+I
Sbjct: 336 VQMMSRMNIQPVMLPMTMQQQLQMSMLAPM--NMGMGLAGIGM----NVMDMNTI----- 384
Query: 287 SAPQVQ-CSPTAQLTAFADTTT 307
S P + SP TAF T+
Sbjct: 385 SRPNIAGISPVLHPTAFMPMTS 406
>gi|297814329|ref|XP_002875048.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
gi|297320885|gb|EFH51307.1| hypothetical protein ARALYDRAFT_912247 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMKILQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 209 VSTKRSRAAAIHNQSERKRRDKINQRMKILQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 267
Query: 243 VEFLS 247
V +S
Sbjct: 268 VSMMS 272
>gi|242042934|ref|XP_002459338.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
gi|241922715|gb|EER95859.1| hypothetical protein SORBIDRAFT_02g002760 [Sorghum bicolor]
Length = 446
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR +A + H+++ER RR++I+E+M+ LQ+LVP C+K T KA +LDE I Y++ LQ QV+
Sbjct: 245 RRTRAAEVHNMSERRRRDRINEKMRALQELVPHCNK-TDKASILDEAIEYLKSLQMQVQI 303
Query: 246 LSMKLASVNPMF 257
+ M + PM
Sbjct: 304 MWMS-TGMAPMM 314
>gi|145334165|ref|NP_001078463.1| transcription factor bHLH127 [Arabidopsis thaliana]
gi|75296238|sp|Q7XHI7.1|BH127_ARATH RecName: Full=Transcription factor bHLH127; AltName: Full=Basic
helix-loop-helix protein 127; Short=AtbHLH127;
Short=bHLH 127; AltName: Full=bHLH transcription factor
bHLH127
gi|33111973|emb|CAE12173.1| putative bHLH127 transcription factor [Arabidopsis thaliana]
gi|332660148|gb|AEE85548.1| transcription factor bHLH127 [Arabidopsis thaliana]
Length = 307
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 4/78 (5%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV-E 244
+R +A + H+LAER RREKI+ERMK LQ+L+P C+K T K ML+++I YV+ L+ Q+ +
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKST-KVSMLEDVIEYVKSLEMQINQ 205
Query: 245 FLSMKLASVN--PMFYDF 260
F+ +N P + F
Sbjct: 206 FMPHMAMGMNQPPAYIPF 223
>gi|242086827|ref|XP_002439246.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
gi|241944531|gb|EES17676.1| hypothetical protein SORBIDRAFT_09g003090 [Sorghum bicolor]
Length = 480
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R + + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 257 AKRSRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 315
Query: 245 FLSMKLASVNP 255
+SM P
Sbjct: 316 MMSMGTGLCMP 326
>gi|449521074|ref|XP_004167556.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 356
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP DK T + MLD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 235 YVQFLQNQVEFL 246
+++ LQNQ++ L
Sbjct: 344 HIKGLQNQIQVL 355
>gi|414887375|tpg|DAA63389.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 472
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG ATD SL R RRE+I+ER++ILQ LVP KV + ML+E YV+FLQ Q+
Sbjct: 197 RASRGGATDPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAAQYVKFLQLQI 255
Query: 244 EFLSM-KLASVNPMFYDFGMDLDNTFMVRPDDQQNLN 279
+ LS + P+ Y+ G+++ N + P Q+ +
Sbjct: 256 KLLSSDDMWMYAPIAYN-GINISNVDLNIPALQKAVG 291
>gi|378924999|dbj|BAL63287.1| basic helix-loop-helix protein APG [Oryza sativa Japonica Group]
Length = 432
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 389
Query: 245 FLSM 248
+SM
Sbjct: 390 MMSM 393
>gi|302770807|ref|XP_002968822.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
gi|300163327|gb|EFJ29938.1| hypothetical protein SELMODRAFT_409967 [Selaginella moellendorffii]
Length = 499
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA++G A D S+A R RRE+IS+R+KILQ+L+P KV ML++ INYV+FLQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 244 EFL 246
+ L
Sbjct: 468 KVL 470
>gi|302798757|ref|XP_002981138.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
gi|300151192|gb|EFJ17839.1| hypothetical protein SELMODRAFT_114141 [Selaginella moellendorffii]
Length = 85
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V K PP ++R +A + H+L+ER RR++I+E+MK LQ+L+P +K T KA MLDE
Sbjct: 6 VKKAPP---ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDE 61
Query: 232 IINYVQFLQNQVEFLS 247
I Y++ LQ Q++ LS
Sbjct: 62 AIEYLKMLQLQLQVLS 77
>gi|388520611|gb|AFK48367.1| unknown [Lotus japonicus]
Length = 251
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 45/65 (69%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISE++K L+ L P DK T A MLD + Y++ LQ Q
Sbjct: 167 IRAKRGFATHPRSVAERVRRTRISEKIKKLEGLFPKSDKQTSTADMLDSAVEYIKDLQEQ 226
Query: 243 VEFLS 247
V+ L+
Sbjct: 227 VKTLT 231
>gi|115461987|ref|NP_001054593.1| Os05g0139100 [Oryza sativa Japonica Group]
gi|50511445|gb|AAT77368.1| hypothetical protein [Oryza sativa Japonica Group]
gi|51854388|gb|AAU10768.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578144|dbj|BAF16507.1| Os05g0139100 [Oryza sativa Japonica Group]
Length = 505
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 331 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 389
Query: 245 FLSM 248
+SM
Sbjct: 390 MMSM 393
>gi|302784756|ref|XP_002974150.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
gi|300158482|gb|EFJ25105.1| hypothetical protein SELMODRAFT_414414 [Selaginella moellendorffii]
Length = 499
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA++G A D S+A R RRE+IS+R+KILQ+L+P KV ML++ INYV+FLQ QV
Sbjct: 409 RAKQGCANDPQSIAARQRRERISDRLKILQELIPNGSKVD-LVTMLEKAINYVKFLQLQV 467
Query: 244 EFL 246
+ L
Sbjct: 468 KVL 470
>gi|20161601|dbj|BAB90521.1| B1065G12.3 [Oryza sativa Japonica Group]
Length = 234
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P RA+RG AT S+AER RR +IS+R+K LQ LVP DK T + MLD +
Sbjct: 148 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 207
Query: 235 YVQFLQNQVEFL 246
Y++ LQ QVE L
Sbjct: 208 YIKELQGQVEKL 219
>gi|224129878|ref|XP_002320693.1| predicted protein [Populus trichocarpa]
gi|222861466|gb|EEE99008.1| predicted protein [Populus trichocarpa]
Length = 343
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 141 EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERV 200
E +S G + + E +N+ K DS+ KV+ E RA RG ATD SL R
Sbjct: 230 EEESNAGPDGQSSSSCSSEDDNASK-DSDSKVS-EVLSSSGKTRASRGAATDPQSLYARK 287
Query: 201 RREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
RRE+I+ER+KILQ +VP KV + ML+E ++YV+FLQ Q++
Sbjct: 288 RRERINERLKILQHIVPNGTKVD-ISTMLEEAVHYVKFLQLQIK 330
>gi|359478054|ref|XP_002268535.2| PREDICTED: transcription factor bHLH128 [Vitis vinifera]
Length = 357
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + VRA+RG AT S+AER RR +IS ++K LQ LVP DK T A MLD +
Sbjct: 271 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 330
Query: 235 YVQFLQNQVEFLSMKL 250
+++ LQN+V+ L+ +L
Sbjct: 331 HIKGLQNEVQKLNKEL 346
>gi|302801726|ref|XP_002982619.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
gi|300149718|gb|EFJ16372.1| hypothetical protein SELMODRAFT_116654 [Selaginella moellendorffii]
Length = 85
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 4/76 (5%)
Query: 172 VAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
V K PP ++R +A + H+L+ER RR++I+E+MK LQ+L+P +K T KA MLDE
Sbjct: 6 VKKAPP---ARTSSKRSRAAEVHNLSERRRRDRINEKMKALQELIPNSNK-TDKASMLDE 61
Query: 232 IINYVQFLQNQVEFLS 247
I Y++ LQ Q++ LS
Sbjct: 62 AIEYLKMLQLQLQVLS 77
>gi|297733906|emb|CBI15153.3| unnamed protein product [Vitis vinifera]
Length = 385
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 10/126 (7%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
R N ++ S+ PR +K+K + + E + D +++ + + +
Sbjct: 129 RDNETTMMTWPSSESPRSLKAKTTDEDSACHGGSENQ------DEDRETKTQTGRSH--- 179
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RR +A H+ +ER RR++I+++MK LQKLVP K T KA MLDE+I Y++ LQ QV
Sbjct: 180 STRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 238
Query: 244 EFLSMK 249
+ +S++
Sbjct: 239 QMMSVR 244
>gi|225457285|ref|XP_002284441.1| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
Length = 423
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 10/126 (7%)
Query: 124 RTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHV 183
R N ++ S+ PR +K+K + + E + D +++ + + +
Sbjct: 167 RDNETTMMTWPSSESPRSLKAKTTDEDSACHGGSENQ------DEDRETKTQTGRSH--- 217
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RR +A H+ +ER RR++I+++MK LQKLVP K T KA MLDE+I Y++ LQ QV
Sbjct: 218 STRRSRAAAIHNQSERRRRDRINQKMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQV 276
Query: 244 EFLSMK 249
+ +S++
Sbjct: 277 QMMSVR 282
>gi|218196060|gb|EEC78487.1| hypothetical protein OsI_18387 [Oryza sativa Indica Group]
Length = 289
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 115 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 173
Query: 245 FLSM 248
+SM
Sbjct: 174 MMSM 177
>gi|326523485|dbj|BAJ92913.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+RG+ + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 246 LS 247
+S
Sbjct: 380 MS 381
>gi|326500148|dbj|BAJ90909.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 493
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+RG+ + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 321 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 379
Query: 246 LS 247
+S
Sbjct: 380 MS 381
>gi|326487850|dbj|BAJ89764.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508951|dbj|BAJ86868.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 396
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
V +K + + +D++ E+ E +A E K ++ H RR +A + H+ +ER R
Sbjct: 167 VHKRKGRGKDDSDSRSEDVEC--EATEETKSSRR------HGSKRRSRAAEVHNQSERRR 218
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
R++I+E+M+ LQ+L+P C+K KA +LDE I Y++ LQ QV+ + M + + PM +
Sbjct: 219 RDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQMQVQVMWMT-SGMAPMMF 273
>gi|326525038|dbj|BAK07789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 497
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+RG+ + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 325 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 383
Query: 246 LS 247
+S
Sbjct: 384 MS 385
>gi|334184893|ref|NP_001189738.1| transcription factor bHLH129 [Arabidopsis thaliana]
gi|330255120|gb|AEC10214.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 309
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 177 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP DK T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 235 YVQFLQNQVEFL 246
+++ LQ+QVE L
Sbjct: 283 HIKGLQHQVESL 294
>gi|357129887|ref|XP_003566591.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 448
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+RG+ + H+++ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 266 KRGRTAEVHNMSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQM 324
Query: 246 LS 247
+S
Sbjct: 325 MS 326
>gi|224094310|ref|XP_002310136.1| predicted protein [Populus trichocarpa]
gi|222853039|gb|EEE90586.1| predicted protein [Populus trichocarpa]
Length = 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISERM+ILQ+LVPG K+ A MLDE I+YV+FL+ QV+ L
Sbjct: 166 DPQSVAARHRRERISERMRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSL 219
>gi|326505558|dbj|BAJ95450.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 142 VKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVR 201
V +K + + +D++ E+ E +A E K ++ H RR +A + H+ +ER R
Sbjct: 158 VHKRKGRGKDDSDSRSEDVEC--EATEETKSSRR------HGSKRRSRAAEVHNQSERRR 209
Query: 202 REKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNPMFY 258
R++I+E+M+ LQ+L+P C+K KA +LDE I Y++ LQ QV+ + M + + PM +
Sbjct: 210 RDRINEKMRSLQELIPHCNKAD-KASILDEAIEYLKSLQMQVQVMWMT-SGMAPMMF 264
>gi|392513513|emb|CCE46185.1| bHLH transcription factor [Amborella trichopoda]
Length = 445
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 6/183 (3%)
Query: 67 GDNHDHHSDDNCNEPSNNNSLATKNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTN 126
GDN H E A +N SS + + T T+ + + +
Sbjct: 67 GDNKTLHEQPLRPEFPVLGDFARRNLPLVSSSVGDETAEGTERGVCGTSGLSEAGVSGRQ 126
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
+S S+ +D K K+K N D + E+ + ++++K P +
Sbjct: 127 SSIGDQSSPRRDSEPCK--KKKAHNDTDLDDLDCESEEGQEPSEEMSKPAPS---RSSTK 181
Query: 187 RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L
Sbjct: 182 RSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQML 240
Query: 247 SMK 249
SMK
Sbjct: 241 SMK 243
>gi|297745167|emb|CBI39159.3| unnamed protein product [Vitis vinifera]
Length = 410
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + VRA+RG AT S+AER RR +IS ++K LQ LVP DK T A MLD +
Sbjct: 324 PEDSVPCKVRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 383
Query: 235 YVQFLQNQVEFLSMKL 250
+++ LQN+V+ L+ +L
Sbjct: 384 HIKGLQNEVQKLNKEL 399
>gi|224131550|ref|XP_002321112.1| predicted protein [Populus trichocarpa]
gi|222861885|gb|EEE99427.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T A ML+ +
Sbjct: 255 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKTLQDLVPNMDKQTSYADMLELAVK 314
Query: 235 YVQFLQNQVEFLSMKL 250
+++ LQN+VE L +L
Sbjct: 315 HIKGLQNEVEKLHKEL 330
>gi|222630134|gb|EEE62266.1| hypothetical protein OsJ_17053 [Oryza sativa Japonica Group]
Length = 404
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R + + H+L+ER RR++I+E+M+ LQ+L+P C+K+ KA ML+E I Y++ LQ QV+
Sbjct: 210 SKRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNKID-KASMLEEAIEYLKTLQLQVQ 268
Query: 245 FLSM 248
+SM
Sbjct: 269 MMSM 272
>gi|334184231|ref|NP_001189527.1| transcription factor bHLH84 [Arabidopsis thaliana]
gi|330251239|gb|AEC06333.1| transcription factor bHLH84 [Arabidopsis thaliana]
Length = 341
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 183 VRARRGQATDSHSLAERV-------------RREKISERMKILQKLVPGCDKVTGKAFML 229
RA RG ATD SL R+ RRE+I+ER++ILQ LVP KV + ML
Sbjct: 237 TRASRGAATDPQSLYARLKQLNKVHCMMVQKRRERINERLRILQHLVPNGTKVD-ISTML 295
Query: 230 DEIINYVQFLQNQVEFLSM-KLASVNPMFY---DFGMDLDNTFMVR 271
+E + YV+FLQ Q++ LS L P+ Y D G+DL + R
Sbjct: 296 EEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLDLKLNALTR 341
>gi|323388933|gb|ADX60271.1| bHLH transcription factor [Oryza sativa Japonica Group]
gi|323388951|gb|ADX60280.1| HLH transcription factor [Oryza sativa Japonica Group]
Length = 387
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P RA+RG AT S+AER RR +IS+R+K LQ LVP DK T + MLD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 235 YVQFLQNQVEFL 246
Y++ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|115441653|ref|NP_001045106.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|56784863|dbj|BAD82103.1| putative helix-loop-helix protein 1A [Oryza sativa Japonica Group]
gi|113534637|dbj|BAF07020.1| Os01g0900800 [Oryza sativa Japonica Group]
gi|215687014|dbj|BAG90828.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218189543|gb|EEC71970.1| hypothetical protein OsI_04807 [Oryza sativa Indica Group]
Length = 387
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 45/72 (62%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+P RA+RG AT S+AER RR +IS+R+K LQ LVP DK T + MLD +
Sbjct: 301 QPDSVACRARAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDIAVT 360
Query: 235 YVQFLQNQVEFL 246
Y++ LQ QVE L
Sbjct: 361 YIKELQGQVEKL 372
>gi|326497797|dbj|BAK05983.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
Query: 159 EKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPG 218
E E ++ E + P+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 132 ESEAGGSSEPEPHGTSDRPRGGGGSGSKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPN 191
Query: 219 CDKVTGKAFMLDEIINYVQFLQNQVEFLSMK-LASVNPMFYDFGMD 263
+K T KA MLDE I Y++ LQ QV+ LSM+ +NP + ++
Sbjct: 192 SNK-TDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALE 236
>gi|168024155|ref|XP_001764602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684180|gb|EDQ70584.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 801
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 114 TTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSPKADSEQKV 172
T +D + T++S + ++ ++ P+E + ++K +++EE E S + E
Sbjct: 523 TQHLDIQEPTITSSSGRYATS-AEPPKEPVTGTKRK----SSEREEPECQSEDMEDESVD 577
Query: 173 AKEPPKDYIHVRA-RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDE 231
K+ P V +R +A + H+ +ER RR++I+E+M+ LQ+L+P +K T KA MLDE
Sbjct: 578 TKQKPATTGRVSTTKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDE 636
Query: 232 IINYVQFLQNQVEFLSMKLA-SVNPMFYDFGM 262
I Y++ LQ Q++ +S++ ++ PM G+
Sbjct: 637 AIEYLKMLQLQLQMMSIRTGMTLPPMVMPPGL 668
>gi|255572912|ref|XP_002527387.1| DNA binding protein, putative [Ricinus communis]
gi|223533239|gb|EEF34994.1| DNA binding protein, putative [Ricinus communis]
Length = 377
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS R+K LQ LVP DK T A MLD +
Sbjct: 291 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGRLKKLQDLVPNMDKQTSYADMLDLAVQ 350
Query: 235 YVQFLQNQVEFLSMKL 250
+++ LQ +V+ L +L
Sbjct: 351 HIKGLQGEVQKLHKEL 366
>gi|449461837|ref|XP_004148648.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
gi|449524665|ref|XP_004169342.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 223
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R+RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 118 DPQSIAARLRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 171
>gi|413939376|gb|AFW73927.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 279
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|357444407|ref|XP_003592481.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481529|gb|AES62732.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 287
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
E PK RA ATD+ S+ R RRE+I+ER++ILQ LVP KV ML+E +
Sbjct: 188 EAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVPNGTKVDIST-MLEEAVQ 246
Query: 235 YVQFLQNQVEFLSMK-LASVNPMFY---DFGMDL 264
YV+FLQ Q++ LS + + P+ Y + G+DL
Sbjct: 247 YVKFLQLQIKLLSSEDMWMYAPIAYNGMNIGLDL 280
>gi|219363643|ref|NP_001136510.1| uncharacterized protein LOC100216625 [Zea mays]
gi|194688606|gb|ACF78387.1| unknown [Zea mays]
gi|223949339|gb|ACN28753.1| unknown [Zea mays]
gi|413939377|gb|AFW73928.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 280
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 40 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 98
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 99 QMLSMR 104
>gi|145360933|ref|NP_181843.2| transcription factor bHLH129 [Arabidopsis thaliana]
gi|218563526|sp|Q9ZW81.2|BH129_ARATH RecName: Full=Transcription factor bHLH129; AltName: Full=Basic
helix-loop-helix protein 129; Short=AtbHLH129;
Short=bHLH 129; AltName: Full=Transcription factor EN
73; AltName: Full=bHLH transcription factor bHLH129
gi|330255119|gb|AEC10213.1| transcription factor bHLH129 [Arabidopsis thaliana]
Length = 297
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 177 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP DK T A MLD +
Sbjct: 225 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 235 YVQFLQNQVE 244
+++ LQ+QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|449468734|ref|XP_004152076.1| PREDICTED: transcription factor bHLH128-like [Cucumis sativus]
Length = 370
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ+LVP DK T + MLD +
Sbjct: 284 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYSDMLDLAVQ 343
Query: 235 YVQFLQNQVEFL 246
+++ LQNQ++ L
Sbjct: 344 HIKGLQNQIQKL 355
>gi|195639614|gb|ACG39275.1| hypothetical protein [Zea mays]
Length = 282
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 42 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKHLQLQV 100
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 101 QMLSMR 106
>gi|326514040|dbj|BAJ92170.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 341
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 82/144 (56%), Gaps = 12/144 (8%)
Query: 118 DKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSPKADSEQKVAKEP 176
D + + +A+ + +SA S+ P +KQ G + + +++ S AD + A++P
Sbjct: 172 DGRSYHSASATLTTSSAWSR-PSGASKRKQCDGAESPGEVMQQDVESESADVTCETAQKP 230
Query: 177 PKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYV 236
A+R +A H+L+ER RR++I+E+M+ LQ+LVP C+K T KA MLDE I Y+
Sbjct: 231 ------ATAKRRRAAQVHNLSERRRRDRINEKMRALQELVPHCNK-TDKASMLDEAIEYL 283
Query: 237 QFLQNQVEF---LSMKLASVNPMF 257
+ LQ Q++ + ++A MF
Sbjct: 284 KSLQLQLQVMWAMGGRMAPAPVMF 307
>gi|20127012|gb|AAM10933.1|AF488561_1 putative bHLH transcription factor [Arabidopsis thaliana]
Length = 399
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 243 VEFLS 247
V +S
Sbjct: 266 VSMMS 270
>gi|30678541|ref|NP_191916.3| transcription factor UNE10 [Arabidopsis thaliana]
gi|75299638|sp|Q8GZ38.1|UNE10_ARATH RecName: Full=Transcription factor UNE10; AltName: Full=Basic
helix-loop-helix protein 16; Short=AtbHLH16; Short=bHLH
16; AltName: Full=Protein UNFERTILIZED EMBRYO SAC 10;
AltName: Full=Transcription factor EN 108; AltName:
Full=bHLH transcription factor bHLH016
gi|26449558|dbj|BAC41905.1| putative bHLH transcription factor bHLH016 [Arabidopsis thaliana]
gi|109134123|gb|ABG25060.1| At4g00050 [Arabidopsis thaliana]
gi|332656418|gb|AEE81818.1| transcription factor UNE10 [Arabidopsis thaliana]
Length = 399
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 207 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 265
Query: 243 VEFLS 247
V +S
Sbjct: 266 VSMMS 270
>gi|3763923|gb|AAC64303.1| hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 177 PKDYIHVRAR--RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + RAR RG AT S+AER RR +IS ++K LQ+LVP DK T A MLD +
Sbjct: 223 PEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 282
Query: 235 YVQFLQNQVE 244
+++ LQ+QVE
Sbjct: 283 HIKGLQHQVE 292
>gi|357482855|ref|XP_003611714.1| Transcription factor SPATULA [Medicago truncatula]
gi|355513049|gb|AES94672.1| Transcription factor SPATULA [Medicago truncatula]
Length = 344
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%), Gaps = 2/70 (2%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-S 252
H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LS++ S
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLRNGLS 174
Query: 253 VNPMFYDFGM 262
++PM++ G+
Sbjct: 175 LHPMYFHEGL 184
>gi|302813935|ref|XP_002988652.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
gi|300143473|gb|EFJ10163.1| hypothetical protein SELMODRAFT_128445 [Selaginella moellendorffii]
Length = 61
Score = 65.5 bits (158), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/39 (76%), Positives = 35/39 (89%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDK 221
VRARRGQATD HS+AER+RREKI+ERMK LQ+LVP +K
Sbjct: 1 VRARRGQATDPHSIAERLRREKIAERMKALQELVPNANK 39
>gi|242055293|ref|XP_002456792.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
gi|241928767|gb|EES01912.1| hypothetical protein SORBIDRAFT_03g042860 [Sorghum bicolor]
Length = 361
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +IS+R+K LQ LVP DK T + MLD ++Y++ L+++
Sbjct: 281 VRAKRGCATHPRSIAERERRTRISKRLKKLQDLVPNMDKQTNTSDMLDLAVDYIKELKDR 340
Query: 243 VEFL 246
VE L
Sbjct: 341 VEKL 344
>gi|212720610|ref|NP_001131794.1| uncharacterized protein LOC100193167 [Zea mays]
gi|194692562|gb|ACF80365.1| unknown [Zea mays]
gi|413953032|gb|AFW85681.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 312
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R +A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 102 KRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQM 160
Query: 246 LSMK 249
LSM+
Sbjct: 161 LSMR 164
>gi|356548947|ref|XP_003542860.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 438
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AER RR +IS R+K LQ L P DK T A MLD + Y++ LQ Q
Sbjct: 360 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKSDKQTSTADMLDLAVEYIKDLQKQ 419
Query: 243 VEFL 246
V+ L
Sbjct: 420 VKIL 423
>gi|168000336|ref|XP_001752872.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696035|gb|EDQ82376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 583
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +RG ATD S+ R RREKI+ER++ LQ L+P KV MLDE ++YVQFL+ QV
Sbjct: 448 RVQRGSATDPQSVHARARREKIAERLRKLQHLIPNGGKVD-IVTMLDEAVHYVQFLKRQV 506
>gi|414590707|tpg|DAA41278.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 286
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA RG AT+ SL R RRE+I+ER++ILQ LVP KV + ML+E YV+FLQ Q+
Sbjct: 195 RASRGAATEPQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAAQYVKFLQLQI 253
Query: 244 EFLS 247
+ LS
Sbjct: 254 KLLS 257
>gi|356542383|ref|XP_003539646.1| PREDICTED: transcription factor bHLH130-like [Glycine max]
Length = 434
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 42/64 (65%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AER RR +IS R+K LQ L P DK T A MLD + Y++ LQ Q
Sbjct: 356 IRAKRGFATHPRSIAERERRTRISARIKKLQDLFPKTDKQTSTADMLDLAVEYIKDLQKQ 415
Query: 243 VEFL 246
V+ L
Sbjct: 416 VKML 419
>gi|255547289|ref|XP_002514702.1| DNA binding protein, putative [Ricinus communis]
gi|223546306|gb|EEF47808.1| DNA binding protein, putative [Ricinus communis]
Length = 440
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+RR +A H+ +ER RR++I+++MK LQKLVP K T KA MLDE+I Y++ LQ QV+
Sbjct: 243 SRRTRAAAVHNQSERRRRDRINQKMKALQKLVPNASK-TDKASMLDEVIEYLKQLQAQVQ 301
Query: 245 FLSMKLASVNPMFYDFGM--DLDNTFMVR 271
+S++ ++ M GM L + + R
Sbjct: 302 AMSVR--NMPQMMMPLGMQQQLQMSLLAR 328
>gi|255644916|gb|ACU22958.1| unknown [Glycine max]
Length = 242
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
D S+A R RRE+ISER+KILQ+LVPG K+ A MLDE I+YV+FL+ QV+ L A
Sbjct: 139 DPQSVAARHRRERISERIKILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQTLEQAGA 197
Query: 252 S 252
S
Sbjct: 198 S 198
>gi|222632408|gb|EEE64540.1| hypothetical protein OsJ_19392 [Oryza sativa Japonica Group]
Length = 388
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 53/78 (67%), Gaps = 9/78 (11%)
Query: 172 VAKEPPKDYIHVRARRGQ---ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFM 228
A +PP+ R RR ++D ++A R+RRE++SER+++LQ+LVPG K+ A M
Sbjct: 260 AAPQPPQ-----RPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATM 313
Query: 229 LDEIINYVQFLQNQVEFL 246
LDE +Y++FL++Q+E L
Sbjct: 314 LDEAASYLKFLKSQLEAL 331
>gi|413918730|gb|AFW58662.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 223
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T A MLD +++++ LQN+
Sbjct: 143 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQNE 202
Query: 243 VEFL 246
++ L
Sbjct: 203 LQAL 206
>gi|356557136|ref|XP_003546874.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 445
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AER RR +ISER+K LQ L P +K T A MLD + +++ LQ Q
Sbjct: 361 IRAKRGFATHPRSIAERERRTRISERIKKLQDLFPRSEKPTSTADMLDLAVEHIKDLQQQ 420
Query: 243 VEFLSMKLA 251
V+ LS + A
Sbjct: 421 VQILSDRKA 429
>gi|295881692|gb|ADG56590.1| ALCATRAZ/SPATULA-like protein [Prunus persica]
Length = 386
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+++E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 154 SKRSRAAEVHNMSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 212
Query: 245 FLSMKLA-SVNPM 256
LSM+ S++PM
Sbjct: 213 MLSMRNGMSLHPM 225
>gi|218187187|gb|EEC69614.1| hypothetical protein OsI_38988 [Oryza sativa Indica Group]
Length = 271
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 184 RARRG-QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
RARR + + +HSL ER RR KI+E +K LQ+LVPGCDK +A LD+ I Y++ LQ
Sbjct: 112 RARRSSRYSQTHSLTERKRRCKINENLKTLQQLVPGCDKSNNQASTLDKTIRYMKSLQQH 171
Query: 243 VEFLS----MKLASVNPMFYDF 260
V+ +S MK A+ ++ F
Sbjct: 172 VQAMSVGCIMKPAAAGVSYHPF 193
>gi|242058469|ref|XP_002458380.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
gi|241930355|gb|EES03500.1| hypothetical protein SORBIDRAFT_03g032520 [Sorghum bicolor]
Length = 406
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQKLVPG K+ A MLDE +Y++FL++QV+ L
Sbjct: 293 SSDPQTVAARLRRERVSERLRVLQKLVPGGSKMD-TASMLDEAASYLKFLKSQVQAL 348
>gi|226491584|ref|NP_001147257.1| protein SPATULA [Zea mays]
gi|195609152|gb|ACG26406.1| protein SPATULA [Zea mays]
Length = 185
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARR ++ + H+ +ER RR+KI+E++K LQ+L+P C+K T K MLDE I+Y++ LQ Q++
Sbjct: 14 ARRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQ 72
Query: 245 FLSM 248
L M
Sbjct: 73 MLVM 76
>gi|125554209|gb|EAY99814.1| hypothetical protein OsI_21804 [Oryza sativa Indica Group]
Length = 315
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 245 FLSMK-LASVNPMFYDFGMD 263
LSM+ +NP + ++
Sbjct: 158 MLSMRNGVYLNPSYLSGALE 177
>gi|55296133|dbj|BAD67851.1| basic helix-loop-helix protein SPATULA-like [Oryza sativa Japonica
Group]
gi|125596157|gb|EAZ35937.1| hypothetical protein OsJ_20240 [Oryza sativa Japonica Group]
Length = 315
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 245 FLSMK-LASVNPMFYDFGMD 263
LSM+ +NP + ++
Sbjct: 158 MLSMRNGVYLNPSYLSGALE 177
>gi|242066894|ref|XP_002454736.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
gi|241934567|gb|EES07712.1| hypothetical protein SORBIDRAFT_04g036450 [Sorghum bicolor]
Length = 277
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 41 RGKRSRAAEVHNLSEKRRRSRINEKMKALQTLIPNSSK-TDKASMLDDAIEYLKQLQLQV 99
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 100 QMLSMR 105
>gi|15451582|gb|AAK98706.1|AC069158_18 Putative SPATULA [Oryza sativa Japonica Group]
Length = 298
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 27 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 85
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 86 QMLSMR 91
>gi|225458639|ref|XP_002282817.1| PREDICTED: transcription factor HEC1 [Vitis vinifera]
gi|302142304|emb|CBI19507.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I+YV+FL+ QV+ L + A
Sbjct: 154 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKTQVQSLE-RAA 211
Query: 252 SVNPMFYDFGMDLDN 266
+ P F + + N
Sbjct: 212 ANRPAGIGFPVTMSN 226
>gi|125541527|gb|EAY87922.1| hypothetical protein OsI_09345 [Oryza sativa Indica Group]
Length = 320
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|414880798|tpg|DAA57929.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414880799|tpg|DAA57930.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
Length = 422
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+D ++A R+RRE++SER+++LQKLVPG K+ A MLDE +Y++FL++QV+ L
Sbjct: 293 SDPQTVAARLRRERVSERLRVLQKLVPGGSKMD-TASMLDEAASYLKFLKSQVQAL 347
>gi|125584067|gb|EAZ24998.1| hypothetical protein OsJ_08778 [Oryza sativa Japonica Group]
Length = 320
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+E+ RR +I+E+MK LQ L+P K T KA MLD+ I Y++ LQ QV
Sbjct: 49 RGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEYLKQLQLQV 107
Query: 244 EFLSMK 249
+ LSM+
Sbjct: 108 QMLSMR 113
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
gi|378405153|sp|Q9SVU7.2|BH056_ARATH RecName: Full=Putative transcription factor bHLH056; AltName:
Full=Basic helix-loop-helix protein 56; Short=AtbHLH56;
Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
gi|332660146|gb|AEE85546.1| basic helix-loop-helix domain-containing protein [Arabidopsis
thaliana]
Length = 445
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 12/94 (12%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
+R + + H+LAER RREKI+E+MK LQ+L+P C+K T K LD+ I YV+ LQ+Q++
Sbjct: 252 KRSRTAEMHNLAERRRREKINEKMKTLQQLIPRCNKST-KVSTLDDAIEYVKSLQSQIQG 310
Query: 246 LSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLN 279
+ ++PM M+ NT P ++N
Sbjct: 311 M------MSPM-----MNAGNTQQFMPHMAMDMN 333
>gi|242084068|ref|XP_002442459.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
gi|241943152|gb|EES16297.1| hypothetical protein SORBIDRAFT_08g020320 [Sorghum bicolor]
Length = 342
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 55/91 (60%), Gaps = 10/91 (10%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R+ G+A H L E+ RR KI+ER+K LQ+LVPGC K + +A LD+ I+Y++ LQ QV
Sbjct: 168 RSHHGEA---HKLTEKRRRHKINERLKTLQQLVPGCSK-SNQASTLDQTIHYMKSLQQQV 223
Query: 244 EFLSMKLAS------VNPMFYDFGMDLDNTF 268
+ +S+ LA+ V P GM + F
Sbjct: 224 QAMSVGLAAPAVYPIVQPQCMPPGMPVAMPF 254
>gi|140084368|gb|ABO84934.1| Rhd6-like 5 [Physcomitrella patens]
Length = 67
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
G ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YV+FLQNQVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKSLQNLVPNGAKV-DIVTMLDEAIHYVKFLQNQVELL 58
>gi|356541324|ref|XP_003539128.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 459
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K T KA MLDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-TDKASMLDEVIEYLKQLQAQ 322
Query: 243 VEFL 246
V+ +
Sbjct: 323 VQMM 326
>gi|224059166|ref|XP_002299748.1| predicted protein [Populus trichocarpa]
gi|222847006|gb|EEE84553.1| predicted protein [Populus trichocarpa]
Length = 304
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 10/87 (11%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
+VA++P + + + +TD ++A R RRE+IS+R+++LQ +VPG K+ A MLD
Sbjct: 192 EVAEKPKRKNVRI------STDPQTVAARQRRERISDRIRVLQGMVPGGSKMD-TASMLD 244
Query: 231 EIINYVQFLQNQV---EFLSMKLASVN 254
E NY++FL++QV E L KL SVN
Sbjct: 245 EAANYLKFLRSQVKALENLGHKLDSVN 271
>gi|242033665|ref|XP_002464227.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
gi|241918081|gb|EER91225.1| hypothetical protein SORBIDRAFT_01g014580 [Sorghum bicolor]
Length = 300
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+A R AT+S SL R RRE+I+ER++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 210 AKADRRSATESQSLYARKRRERINERLRILQNLVPNGTKVD-ISTMLEEAVEYVKFLQLQ 268
Query: 243 VEFLSM-KLASVNPMFY---DFGMDLD 265
++ LS ++ P+ Y + G+DL+
Sbjct: 269 IKLLSSDEMWMYAPIAYNGMNIGIDLN 295
>gi|356576919|ref|XP_003556577.1| PREDICTED: transcription factor bHLH128-like [Glycine max]
Length = 286
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T A MLD +
Sbjct: 200 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQ 259
Query: 235 YVQFLQNQVEFL 246
+++ LQ QV+ L
Sbjct: 260 HIKGLQTQVQKL 271
>gi|218191124|gb|EEC73551.1| hypothetical protein OsI_07971 [Oryza sativa Indica Group]
Length = 217
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ+LVP DK T A MLD + +++ LQ+Q
Sbjct: 141 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 200
Query: 243 VEFL 246
++ L
Sbjct: 201 LQAL 204
>gi|302805717|ref|XP_002984609.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
gi|300147591|gb|EFJ14254.1| hypothetical protein SELMODRAFT_423809 [Selaginella moellendorffii]
Length = 298
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R+R+G A D S+A R RRE+IS+R+KILQ LVP KV ML++ INYV+F+Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 244 E 244
+
Sbjct: 293 Q 293
>gi|302793827|ref|XP_002978678.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
gi|300153487|gb|EFJ20125.1| hypothetical protein SELMODRAFT_418491 [Selaginella moellendorffii]
Length = 298
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R+R+G A D S+A R RRE+IS+R+KILQ LVP KV ML++ INYV+F+Q Q+
Sbjct: 234 RSRQGTANDPQSIAARQRRERISQRLKILQDLVPNGSKV-DLVTMLEKAINYVKFMQLQL 292
Query: 244 E 244
+
Sbjct: 293 Q 293
>gi|38345229|emb|CAE01659.2| OSJNBa0084K20.3 [Oryza sativa Japonica Group]
gi|38347437|emb|CAE02480.2| OSJNBa0076N16.1 [Oryza sativa Japonica Group]
gi|222629103|gb|EEE61235.1| hypothetical protein OsJ_15277 [Oryza sativa Japonica Group]
Length = 218
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T + MLD +++++ LQ+Q
Sbjct: 134 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 193
Query: 243 VEFL 246
++ L
Sbjct: 194 LQTL 197
>gi|357118625|ref|XP_003561052.1| PREDICTED: uncharacterized protein LOC100821164 [Brachypodium
distachyon]
Length = 331
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 102 SKRTRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 160
Query: 245 FLSMK 249
LSM+
Sbjct: 161 MLSMR 165
>gi|115459116|ref|NP_001053158.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|113564729|dbj|BAF15072.1| Os04g0489600 [Oryza sativa Japonica Group]
gi|215695534|dbj|BAG90725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195100|gb|EEC77527.1| hypothetical protein OsI_16412 [Oryza sativa Indica Group]
Length = 369
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T + MLD +++++ LQ+Q
Sbjct: 285 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQ 344
Query: 243 VEFL 246
++ L
Sbjct: 345 LQTL 348
>gi|297828011|ref|XP_002881888.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
gi|297327727|gb|EFH58147.1| hypothetical protein ARALYDRAFT_483415 [Arabidopsis lyrata subsp.
lyrata]
Length = 297
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + RA+RG AT S+AER RR +IS ++K LQ+LVP DK T A MLD +
Sbjct: 225 PEDSVPCKARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVE 284
Query: 235 YVQFLQNQVE 244
+++ LQ+QVE
Sbjct: 285 HIKGLQHQVE 294
>gi|302805681|ref|XP_002984591.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
gi|300147573|gb|EFJ14236.1| hypothetical protein SELMODRAFT_29179 [Selaginella moellendorffii]
Length = 64
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+ERMK LQ+L+P +K T KA MLDE I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 245 FL 246
+
Sbjct: 63 VV 64
>gi|242084070|ref|XP_002442460.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
gi|241943153|gb|EES16298.1| hypothetical protein SORBIDRAFT_08g020330 [Sorghum bicolor]
Length = 373
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 110 TTATTTRMDKKRKNRTNASSSF--NSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKAD 167
T T+ DK+ K T N K P S+K G + + EK P
Sbjct: 137 TMGTSRDTDKEEKVPTTTEGVMMDNKVMRKAPAGGPSRKSHHGEAH--RLTEKRAVPCRA 194
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
+ + V P + + A G A+R RR KI+ER+K LQ+LVPGC K + +A
Sbjct: 195 AGRGVG--PSTAHNVLWAGPGPVRIGPCRAQR-RRHKINERLKTLQQLVPGCSK-SNQAS 250
Query: 228 MLDEIINYVQFLQNQVEFLSMKLAS--VNPMFYDFGMDLDN 266
LD+ I+Y++ LQ+QV+ +S+ LAS V P+ GM L
Sbjct: 251 TLDQTIHYMKSLQHQVQAMSVGLASPAVYPVVQPQGMPLGT 291
>gi|356536570|ref|XP_003536810.1| PREDICTED: transcription factor UNE12-like [Glycine max]
Length = 283
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 57/77 (74%), Gaps = 5/77 (6%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
GQATD HS+AER+RRE+I+ER++ LQ+LVP +K T +A MLDEI++YV+FL+ QV+ LS
Sbjct: 127 GQATDPHSIAERLRRERIAERIRALQELVPSVNK-TDRAAMLDEIVDYVKFLRLQVKVLS 185
Query: 248 MK----LASVNPMFYDF 260
M +V P+ D
Sbjct: 186 MSRLGGAGAVAPLVTDI 202
>gi|356511167|ref|XP_003524301.1| PREDICTED: uncharacterized protein LOC100775296 [Glycine max]
Length = 266
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 133 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLQSIPQ 191
Query: 252 SVNP 255
S NP
Sbjct: 192 SSNP 195
>gi|226502090|ref|NP_001146660.1| uncharacterized protein LOC100280260 [Zea mays]
gi|219888217|gb|ACL54483.1| unknown [Zea mays]
gi|414868921|tpg|DAA47478.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 397
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R +A H+L+ER RR++I+E+MK LQ+L+P C+K KA MLDE I Y++ LQ Q++
Sbjct: 247 AKRRRAAQVHNLSERRRRDRINEKMKALQELIPHCNKAD-KASMLDEAIEYLKSLQLQLQ 305
Query: 245 FLSM 248
+ M
Sbjct: 306 VVWM 309
>gi|224055255|ref|XP_002298446.1| predicted protein [Populus trichocarpa]
gi|222845704|gb|EEE83251.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RA+RG AT S+AERVRR +ISERM+ LQ+L P DK T A LD I ++ LQ Q
Sbjct: 336 IRAKRGFATHPRSIAERVRRTRISERMRKLQELFPDMDKQTSTADKLDLSIELIKDLQKQ 395
Query: 243 VEFLS 247
V+ L+
Sbjct: 396 VKSLA 400
>gi|356541789|ref|XP_003539355.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 381
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-S 252
H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+ S
Sbjct: 145 HNLSEKRRRGRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMRNGLS 203
Query: 253 VNPMFYDFGM 262
++PM + G+
Sbjct: 204 LHPMCFPEGL 213
>gi|297724285|ref|NP_001174506.1| Os05g0541400 [Oryza sativa Japonica Group]
gi|255676533|dbj|BAH93234.1| Os05g0541400 [Oryza sativa Japonica Group]
Length = 414
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQ+LVPG K+ A MLDE +Y++FL++Q+E L
Sbjct: 302 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 357
>gi|242084158|ref|XP_002442504.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
gi|241943197|gb|EES16342.1| hypothetical protein SORBIDRAFT_08g021000 [Sorghum bicolor]
Length = 531
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 47/60 (78%), Gaps = 1/60 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
A+R +A + H+L+ER RR++I+E+MK LQ+L+P C+K T KA MLDE I Y++ LQ Q++
Sbjct: 310 AKRRRAAEVHNLSERRRRDRINEKMKALQELIPHCNK-TDKASMLDEAIEYLKSLQLQLQ 368
>gi|218197191|gb|EEC79618.1| hypothetical protein OsI_20818 [Oryza sativa Indica Group]
Length = 344
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQ+LVPG K+ A MLDE +Y++FL++Q+E L
Sbjct: 232 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 287
>gi|55908877|gb|AAV67820.1| unknown protein [Oryza sativa Japonica Group]
Length = 416
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQ+LVPG K+ A MLDE +Y++FL++Q+E L
Sbjct: 304 SSDPQTVAARLRRERVSERLRVLQRLVPGGSKMD-TATMLDEAASYLKFLKSQLEAL 359
>gi|449531452|ref|XP_004172700.1| PREDICTED: uncharacterized protein LOC101229339 [Cucumis sativus]
Length = 379
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R ++ + H+++E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 245 FLSMKLA-SVNPM 256
LSM+ S+ PM
Sbjct: 251 MLSMRNGLSLQPM 263
>gi|224091024|ref|XP_002309150.1| predicted protein [Populus trichocarpa]
gi|222855126|gb|EEE92673.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 58/106 (54%), Gaps = 21/106 (19%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
+TD S+A R RR +IS+R KILQ LVPG K+ + ML+E INYV+FL+NQ+
Sbjct: 38 STDPQSVAARERRHRISDRFKILQSLVPGGTKMDTVS-MLEEAINYVKFLKNQIL----- 91
Query: 250 LASVNPMFYDFGMDLDNTFMVRPDDQQNLN-SIIAASASAPQVQCS 294
L T M DD+++L+ + A SAS P Q S
Sbjct: 92 --------------LHQTIMNSVDDERSLDYHLPAGSASLPTEQPS 123
>gi|339716186|gb|AEJ88332.1| putative MYC protein, partial [Tamarix hispida]
Length = 181
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 38/57 (66%), Gaps = 11/57 (19%)
Query: 158 EEKENSPKADSEQKVAKE----------PPKDYIHVRARRGQATDSHSLAERVRREK 204
+E +NS K D+E KE P KDYIHVRARRGQATDSHSLAER RREK
Sbjct: 126 DENQNS-KVDAELGTGKETMQNTKSPPDPSKDYIHVRARRGQATDSHSLAERARREK 181
>gi|356507477|ref|XP_003522492.1| PREDICTED: uncharacterized protein LOC100779374 [Glycine max]
Length = 243
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ FL
Sbjct: 127 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRFL 180
>gi|224065030|ref|XP_002301638.1| predicted protein [Populus trichocarpa]
gi|222843364|gb|EEE80911.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T A MLD +
Sbjct: 69 PEDSVPCKIRAKRGFATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDFAVQ 128
Query: 235 YVQFLQNQVEFLSMKL 250
+++ LQN+VE L ++
Sbjct: 129 HIKGLQNEVEKLHKEM 144
>gi|302793783|ref|XP_002978656.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
gi|300153465|gb|EFJ20103.1| hypothetical protein SELMODRAFT_39143 [Selaginella moellendorffii]
Length = 66
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+ER RR++I+ERMK LQ+L+P +K T KA MLDE I Y++ LQ+Q++
Sbjct: 4 SKRSRAAEVHNLSERKRRDRINERMKALQELIPNSNK-TDKASMLDEAIEYLKLLQHQLQ 62
Query: 245 FL 246
+
Sbjct: 63 VV 64
>gi|356509769|ref|XP_003523618.1| PREDICTED: uncharacterized protein LOC100779202 [Glycine max]
Length = 332
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+A +G ATD SL R RRE+I +R++ILQ LVP KV + ML+E + YV+FLQ Q
Sbjct: 240 TKASKGSATDPQSLYARKRRERIDDRLRILQNLVPNGTKVD-ISTMLEEAVQYVKFLQLQ 298
Query: 243 VEFLSM-KLASVNPMFYDFGMDL 264
+ LS L P+ Y+ G+DL
Sbjct: 299 NKLLSSDDLWMYAPIAYN-GLDL 320
>gi|222080623|gb|ACM41588.1| bHLH transcription factor MYC5 [Catharanthus roseus]
Length = 321
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 142 SKRSRAAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 200
Query: 245 FLSMK 249
L+M+
Sbjct: 201 MLTMR 205
>gi|255565242|ref|XP_002523613.1| conserved hypothetical protein [Ricinus communis]
gi|223537175|gb|EEF38808.1| conserved hypothetical protein [Ricinus communis]
Length = 406
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Query: 154 DAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQ 213
D + EE + + + K A PP+ ++R +A + H+L+E+ RR +I+E+MK LQ
Sbjct: 132 DCESEEGLEALIEEVQTKAA--PPRS----SSKRSRAAEVHNLSEKRRRSRINEKMKALQ 185
Query: 214 KLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-SVNPM 256
L+P +K T KA MLDE I Y++ LQ QV+ LS++ ++PM
Sbjct: 186 NLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSLRNGIGLHPM 228
>gi|242074344|ref|XP_002447108.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
gi|241938291|gb|EES11436.1| hypothetical protein SORBIDRAFT_06g028750 [Sorghum bicolor]
Length = 188
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 63/111 (56%), Gaps = 19/111 (17%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ + H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++ LQ Q++
Sbjct: 16 RRSRSAEFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 74
Query: 246 LSM--KLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCS 294
L M +A V P P+ QQ ++ I A A P ++ S
Sbjct: 75 LVMGKGMAPVVP----------------PELQQYMHYITADPAQMPPLRPS 109
>gi|297828431|ref|XP_002882098.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
gi|297327937|gb|EFH58357.1| hypothetical protein ARALYDRAFT_904169 [Arabidopsis lyrata subsp.
lyrata]
Length = 413
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 13/124 (10%)
Query: 144 SKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR-----RGQATDSHSLAE 198
S K+K G++ + + N+P +S+ K +H R R R ++T+ H L E
Sbjct: 182 SLKRKHGDIEEEESTYLSNNPDDESDDA------KTQVHARIRKPVTKRKRSTEVHKLYE 235
Query: 199 RVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVN-PMF 257
R RR++ +++M+ LQ ++P C K KA +LDE + Y++ LQ+QV+ +SM + PM
Sbjct: 236 RKRRDEFNKKMRALQDILPNCYK-DDKASLLDEAVKYMRTLQHQVQMMSMGNGLIRPPMM 294
Query: 258 YDFG 261
G
Sbjct: 295 LPMG 298
>gi|413950402|gb|AFW83051.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 430
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 7/79 (8%)
Query: 168 SEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
SE+ + P + + + ++D ++A R RRE+ISER+++LQKLVPG K+ A
Sbjct: 305 SEEDAGERPRRRNVRI------SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TAS 357
Query: 228 MLDEIINYVQFLQNQVEFL 246
MLDE +Y++FLQ+QV L
Sbjct: 358 MLDEAASYLRFLQSQVREL 376
>gi|356495472|ref|XP_003516601.1| PREDICTED: transcription factor SPATULA-like [Glycine max]
Length = 375
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%), Gaps = 2/70 (2%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA-S 252
H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+ S
Sbjct: 149 HNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMRNGLS 207
Query: 253 VNPMFYDFGM 262
++PM + G+
Sbjct: 208 LHPMCFPDGL 217
>gi|222623194|gb|EEE57326.1| hypothetical protein OsJ_07428 [Oryza sativa Japonica Group]
Length = 103
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ+LVP DK T A MLD + +++ LQ+Q
Sbjct: 27 VRAKRGCATHPRSIAERERRTRISEKLRKLQELVPNMDKQTSTADMLDLAVEHIKGLQSQ 86
Query: 243 VEFL 246
++ L
Sbjct: 87 LQAL 90
>gi|449445700|ref|XP_004140610.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 243 VE 244
V+
Sbjct: 346 VQ 347
>gi|357165982|ref|XP_003580559.1| PREDICTED: transcription factor PIF1-like [Brachypodium distachyon]
Length = 198
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 63/115 (54%), Gaps = 19/115 (16%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ D H+ +ER RR++I+E++K LQ+L+P C K T K MLDE I+Y++ LQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 75
Query: 246 LSM--KLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAPQVQCSPTAQ 298
L M +A V P P+ QQ ++ I A A PT++
Sbjct: 76 LVMGKGMAPVVP----------------PELQQYMHYITADPAQMHMPPLRPTSE 114
>gi|449515887|ref|XP_004164979.1| PREDICTED: transcription factor UNE10-like [Cucumis sativus]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP +K T KA MLDE+I Y++ LQ Q
Sbjct: 287 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSNK-TDKASMLDEVIEYLKQLQAQ 345
Query: 243 VE 244
V+
Sbjct: 346 VQ 347
>gi|357510373|ref|XP_003625475.1| Transcription factor PIF1 [Medicago truncatula]
gi|355500490|gb|AES81693.1| Transcription factor PIF1 [Medicago truncatula]
Length = 467
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 72/133 (54%), Gaps = 11/133 (8%)
Query: 132 NSAQSKDPREVKSKKQKKGNVNDAKKEEKE-NSPKADSEQKVAKEPPKDYIHVRARRGQA 190
S+ S++P V ++ + EE E S D E AK K+ +R +A
Sbjct: 203 GSSSSEEPEPVGKVAEQDRKRKGIEAEEWEYQSEDVDFESAEAK---KNISGSSTKRSRA 259
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV------E 244
+ H+L+ER RR++I+E+MK LQ+L+P +K + KA MLDE I+Y++ LQ QV +
Sbjct: 260 AEVHNLSERRRRDRINEKMKALQELIPRSNK-SDKASMLDEAIDYLKSLQLQVQRVQLMQ 318
Query: 245 FLSMKLASVNPMF 257
+SM V MF
Sbjct: 319 MMSMGCGMVPMMF 331
>gi|357437785|ref|XP_003589168.1| Transcription factor SPATULA [Medicago truncatula]
gi|355478216|gb|AES59419.1| Transcription factor SPATULA [Medicago truncatula]
Length = 287
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 173 AKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEI 232
A PP+ ++R +A + H+L+E+ RR KI+E++K LQ L+P +K T KA MLDE
Sbjct: 79 AAPPPRS----SSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIPNSNK-TDKASMLDEA 133
Query: 233 INYVQFLQNQVEFLSMKLA-SVNPMFYDFG 261
I Y++ LQ QV+ L ++ S++PM G
Sbjct: 134 IEYLKQLQLQVQMLMVRNGYSLHPMSLSGG 163
>gi|225437758|ref|XP_002273729.1| PREDICTED: uncharacterized protein LOC100253874 [Vitis vinifera]
Length = 569
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y++ LQ QV+
Sbjct: 379 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 437
Query: 245 FLSM 248
+SM
Sbjct: 438 VMSM 441
>gi|414868828|tpg|DAA47385.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 327
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+RR ++H+L E+ RR KI+ER+K LQ++VPGC K + +A LD+ I+Y++ LQ+QV+
Sbjct: 172 SRRSHHGEAHNLTEKRRRHKINERLKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 230
Query: 245 FLS 247
+S
Sbjct: 231 AMS 233
>gi|357130817|ref|XP_003567042.1| PREDICTED: uncharacterized protein LOC100822019 [Brachypodium
distachyon]
Length = 397
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++S+R+++LQKLVPG K+ A MLDE +Y++FL++QV+ L
Sbjct: 285 SSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMD-TASMLDEAASYLKFLRSQVQAL 340
>gi|115454133|ref|NP_001050667.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|50428697|gb|AAT77048.1| putative transcription factor [Oryza sativa Japonica Group]
gi|108709850|gb|ABF97645.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
gi|113549138|dbj|BAF12581.1| Os03g0617800 [Oryza sativa Japonica Group]
gi|125587132|gb|EAZ27796.1| hypothetical protein OsJ_11741 [Oryza sativa Japonica Group]
Length = 310
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM- 248
ATD SL R RRE+I+ER+KILQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 249 KLASVNPMFY---DFGMDLD 265
++ P+ Y + G+DL+
Sbjct: 287 EMWMYAPIAYNGMNIGIDLN 306
>gi|226499484|ref|NP_001146943.1| protein SPATULA [Zea mays]
gi|195605542|gb|ACG24601.1| protein SPATULA [Zea mays]
gi|414585417|tpg|DAA35988.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 1
[Zea mays]
gi|414585418|tpg|DAA35989.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 2
[Zea mays]
gi|414585419|tpg|DAA35990.1| TPA: putative HLH DNA-binding domain superfamily protein isoform 3
[Zea mays]
Length = 185
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%), Gaps = 1/63 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ + H+ +ER RR+KI+E++K LQ+L+P C+K T K MLDE I+Y++ LQ Q++
Sbjct: 15 RRSRSAEFHNFSERRRRDKINEKLKALQELLPNCNK-TDKVSMLDEAIDYLKSLQLQLQM 73
Query: 246 LSM 248
L M
Sbjct: 74 LVM 76
>gi|118486519|gb|ABK95099.1| unknown [Populus trichocarpa]
Length = 561
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 13/100 (13%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +AT+ H+L+ER RR++I+++M+ LQ L+P +KV KA ML E I+Y++ LQ QV+
Sbjct: 377 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 435
Query: 245 FLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAA 284
+SM G L M+ P Q++++ + A
Sbjct: 436 MMSM------------GTRLCMPLMMLPTGMQHIHAPLLA 463
>gi|356501827|ref|XP_003519725.1| PREDICTED: uncharacterized protein LOC100783804 [Glycine max]
Length = 852
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%), Gaps = 10/93 (10%)
Query: 169 EQKVAKEPPKDYIHV-RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAF 227
E V ++P ++ V R+R Q H+L ER RR+KI++RM+IL++L+P C+K T KA
Sbjct: 733 EDVVKEKPAREGTGVKRSRNAQV---HNLCERKRRDKINKRMRILKELIPNCNK-TDKAS 788
Query: 228 MLDEIINYVQFLQNQVE-----FLSMKLASVNP 255
MLD+ I Y++ L+ Q++ F S ++A V P
Sbjct: 789 MLDDAIEYLKTLKLQIQVNFKSFSSYQIAFVRP 821
>gi|224130812|ref|XP_002320931.1| predicted protein [Populus trichocarpa]
gi|222861704|gb|EEE99246.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 61/100 (61%), Gaps = 13/100 (13%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +AT+ H+L+ER RR++I+++M+ LQ L+P +KV KA ML E I+Y++ LQ QV+
Sbjct: 371 SKRRRATEIHNLSERKRRDRINKKMRALQDLIPNSNKVD-KASMLGEAIDYLKSLQLQVQ 429
Query: 245 FLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAA 284
+SM G L M+ P Q++++ + A
Sbjct: 430 MMSM------------GTRLCMPLMMLPTGMQHIHAPLLA 457
>gi|125544879|gb|EAY91018.1| hypothetical protein OsI_12623 [Oryza sativa Indica Group]
Length = 310
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM- 248
ATD SL R RRE+I+ER+KILQ LVP KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 228 ATDPQSLYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAMHYVKFLQLQIKLLSSD 286
Query: 249 KLASVNPMFY---DFGMDLD 265
++ P+ Y + G+DL+
Sbjct: 287 EMWMYAPIAYNGMNIGIDLN 306
>gi|357465537|ref|XP_003603053.1| Transcription factor HEC2 [Medicago truncatula]
gi|355492101|gb|AES73304.1| Transcription factor HEC2 [Medicago truncatula]
Length = 271
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLA 251
D S+A R RRE+ISE+++ILQ++VPG K+ A MLDE I+YV+FL+ Q++ L + +
Sbjct: 180 DPQSIAARHRRERISEKIRILQRMVPGGTKM-DTASMLDEAIHYVKFLKTQLKSLQERAS 238
Query: 252 SVN 254
N
Sbjct: 239 GAN 241
>gi|168023762|ref|XP_001764406.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684270|gb|EDQ70673.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1015
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%), Gaps = 3/139 (2%)
Query: 125 TNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVR 184
T SSS S +P + K + K ++ ++ E ++ D +P
Sbjct: 671 TITSSSGGYGTSIEPLQ-KVRTSNKRKCSEREETECQSEDGEDESVDTKHKPITTGRGST 729
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+R +A + H+ +ER RR++I+E+M+ LQ+L+P +K T KA MLDE I+Y++ LQ Q++
Sbjct: 730 TKRSRAAEVHNQSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIDYLKILQLQLQ 788
Query: 245 FLSMKLA-SVNPMFYDFGM 262
+S++ ++ PM G+
Sbjct: 789 MMSIRTGMTLPPMVMPPGL 807
>gi|242057745|ref|XP_002458018.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
gi|241929993|gb|EES03138.1| hypothetical protein SORBIDRAFT_03g025570 [Sorghum bicolor]
Length = 477
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++QV L
Sbjct: 354 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQVREL 409
>gi|167999578|ref|XP_001752494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696394|gb|EDQ82733.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 538
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+ + S+A R RR+KISER+++L+KL+PG +K+ A MLDE I YV+FLQ QV+ L
Sbjct: 387 SVEPQSVAARHRRKKISERIRVLEKLIPGGNKMD-TATMLDEAIEYVKFLQLQVQIL 442
>gi|223702412|gb|ACN21637.1| putative basic helix-loop-helix protein BHLH13 [Lotus japonicus]
Length = 262
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I+YV+FL+ Q+ L
Sbjct: 134 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIHYVKFLKRQIRLL 187
>gi|242076304|ref|XP_002448088.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
gi|241939271|gb|EES12416.1| hypothetical protein SORBIDRAFT_06g020810 [Sorghum bicolor]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 46/64 (71%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T A MLD +++++ LQ++
Sbjct: 146 VRAKRGCATHPRSIAERERRTRISEKLRKLQALVPNMDKQTSTADMLDLAVDHIRGLQSE 205
Query: 243 VEFL 246
++ L
Sbjct: 206 LQAL 209
>gi|357511583|ref|XP_003626080.1| Transcription factor SPATULA [Medicago truncatula]
gi|355501095|gb|AES82298.1| Transcription factor SPATULA [Medicago truncatula]
Length = 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
++++ + KE P + R + H+L+ER RR+KI+E+++ L++L+P C+K+ KA
Sbjct: 186 ETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMD-KA 244
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRP 272
MLD+ I+Y++ L+ Q++ +SM A P+ N FM+ P
Sbjct: 245 SMLDDAIDYLKTLKLQLQIMSMGRALCMPL---------NHFMMLP 281
>gi|388517319|gb|AFK46721.1| unknown [Medicago truncatula]
Length = 373
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 64/106 (60%), Gaps = 10/106 (9%)
Query: 167 DSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKA 226
++++ + KE P + R + H+L+ER RR+KI+E+++ L++L+P C+K+ KA
Sbjct: 186 ETQENIVKEKPVRERNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIPNCNKMD-KA 244
Query: 227 FMLDEIINYVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRP 272
MLD+ I+Y++ L+ Q++ +SM A P+ N FM+ P
Sbjct: 245 SMLDDAIDYLKTLKLQLQIMSMGRALCMPL---------NHFMMLP 281
>gi|356553958|ref|XP_003545317.1| PREDICTED: transcription factor ALC-like [Glycine max]
Length = 181
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 121 SKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 179
Query: 245 FL 246
+L
Sbjct: 180 YL 181
>gi|356522216|ref|XP_003529743.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 431
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+TD ++A R RRE+ISE++++LQKLVPG K+ A MLDE NY++FL++QV+ L
Sbjct: 339 STDPQTVAARHRRERISEKIRVLQKLVPGGSKMD-TASMLDEAANYLKFLRSQVKAL 394
>gi|224081688|ref|XP_002306475.1| predicted protein [Populus trichocarpa]
gi|222855924|gb|EEE93471.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 158 EEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVP 217
E +E E V PP+ ++R +A + H+L+E+ RR +I+E+MK LQ L+P
Sbjct: 112 ESEEGLEALIDEMSVKPAPPRS-----SKRTRAAEVHNLSEKRRRSRINEKMKALQNLIP 166
Query: 218 GCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASV 253
K T KA MLDE I Y++ LQ QV+ LS++ +
Sbjct: 167 NSSK-TDKASMLDEAIEYLKLLQLQVQGLSVRFLEI 201
>gi|356528881|ref|XP_003533026.1| PREDICTED: transcription factor bHLH87-like [Glycine max]
Length = 443
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 53/76 (69%), Gaps = 7/76 (9%)
Query: 171 KVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLD 230
+VA++P + + + +TD ++A R RRE+I+E++++LQKLVPG K+ A MLD
Sbjct: 328 EVAEKPKRKNVKI------STDPQTVAARHRRERINEKIRVLQKLVPGGSKMD-TASMLD 380
Query: 231 EIINYVQFLQNQVEFL 246
E NY++FL++QV+ L
Sbjct: 381 EAANYLKFLRSQVKAL 396
>gi|307135852|gb|ADN33721.1| serine/threonine-protein kinase [Cucumis melo subsp. melo]
Length = 842
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 59/98 (60%), Gaps = 14/98 (14%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R ++ + H+++E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 245 FLSMKLA-SVNPM----------FYDFGMDLD--NTFM 269
LSM+ S+ PM G+D D N F+
Sbjct: 251 MLSMRNGLSLQPMCLPGVLQPIQLPQMGLDFDVGNAFL 288
>gi|242086066|ref|XP_002443458.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
gi|241944151|gb|EES17296.1| hypothetical protein SORBIDRAFT_08g019780 [Sorghum bicolor]
Length = 316
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA R T+ S+ R RRE+I+ER+KILQ LVP KV + ML+E ++YV+FLQ Q+
Sbjct: 227 RAGRSATTEPQSIYARKRRERINERLKILQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 285
Query: 244 EFLS------MKLASVNPMFYDFGMDLD 265
LS + N M G+DL+
Sbjct: 286 RLLSSDDTWMYAPIAYNGMNIGIGIDLN 313
>gi|255548227|ref|XP_002515170.1| hypothetical protein RCOM_1343120 [Ricinus communis]
gi|223545650|gb|EEF47154.1| hypothetical protein RCOM_1343120 [Ricinus communis]
Length = 584
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 157 KEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLV 216
KE S AD E+++ K ++ + HSL+ER RR+KI+++M+ LQ L+
Sbjct: 355 KEMASPSENADEEEEIPKS-------TSTKKKRIPQVHSLSERKRRDKINKKMRALQALI 407
Query: 217 PGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMKLASVNP 255
P DKV KA MLD+ I Y++ LQ Q++ +SM+ + P
Sbjct: 408 PNSDKV-DKASMLDKAIEYLKTLQLQLQMMSMRGSCYMP 445
>gi|356528585|ref|XP_003532880.1| PREDICTED: uncharacterized protein LOC100777351 [Glycine max]
Length = 271
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 138 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLL 191
>gi|226496303|ref|NP_001147052.1| protein SPATULA [Zea mays]
gi|195606902|gb|ACG25281.1| protein SPATULA [Zea mays]
Length = 215
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 13/101 (12%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++ LQ Q++
Sbjct: 17 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 75
Query: 246 LSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASA 286
L M GM +V P+ QQ ++ I A A
Sbjct: 76 LVMGKGG--------GM----APVVPPELQQYMHYITADPA 104
>gi|449450231|ref|XP_004142867.1| PREDICTED: uncharacterized protein LOC101203008 [Cucumis sativus]
Length = 842
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R ++ + H+++E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 192 SKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 250
Query: 245 FLSMKLA-SVNPM 256
LSM+ S+ PM
Sbjct: 251 MLSMRNGLSLQPM 263
>gi|223975981|gb|ACN32178.1| unknown [Zea mays]
gi|413946283|gb|AFW78932.1| putative HLH DNA-binding domain superfamily protein isoform 1 [Zea
mays]
gi|413946284|gb|AFW78933.1| putative HLH DNA-binding domain superfamily protein isoform 2 [Zea
mays]
Length = 396
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
++D ++A R+RRE++SER+++LQ+LVPG ++ A MLDE Y++FL++QV+ L
Sbjct: 286 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMD-TASMLDEAAGYLKFLKSQVKALERA 344
Query: 250 LASVNPMFYD 259
S N + D
Sbjct: 345 NPSSNGGYND 354
>gi|42569994|ref|NP_182220.2| transcription factor PIL1 [Arabidopsis thaliana]
gi|75301051|sp|Q8L5W8.1|PIL1_ARATH RecName: Full=Transcription factor PIL1; AltName: Full=Basic
helix-loop-helix protein 124; Short=AtbHLH124;
Short=bHLH 124; AltName: Full=Protein PHYTOCHROME
INTERACTING FACTOR 3-LIKE 1; AltName: Full=Transcription
factor EN 110; AltName: Full=bHLH transcription factor
bHLH124
gi|22535492|dbj|BAC10689.1| PIF3 like basic Helix Loop Helix protein [Arabidopsis thaliana]
gi|61742691|gb|AAX55166.1| hypothetical protein At2g46970 [Arabidopsis thaliana]
gi|330255685|gb|AEC10779.1| transcription factor PIL1 [Arabidopsis thaliana]
Length = 416
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
+SS F+ S+D S K+K G++ + + N+ +D E AK +H R R
Sbjct: 169 SSSKFSRGTSRD-LSCCSLKRKYGDIEEEESTYLSNN--SDDESDDAK----TQVHARTR 221
Query: 187 -----RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
R ++T+ H L ER RR++ +++M+ LQ L+P C K KA +LDE I Y++ LQ
Sbjct: 222 KPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQL 280
Query: 242 QVEFLSMKLASVNP 255
QV+ +SM + P
Sbjct: 281 QVQMMSMGNGLIRP 294
>gi|242092116|ref|XP_002436548.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
gi|241914771|gb|EER87915.1| hypothetical protein SORBIDRAFT_10g004500 [Sorghum bicolor]
Length = 291
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
A + H+L+E+ RR KI+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 84 AAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 142
>gi|242088653|ref|XP_002440159.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
gi|241945444|gb|EES18589.1| hypothetical protein SORBIDRAFT_09g027030 [Sorghum bicolor]
Length = 401
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQ+LVPG ++ A MLDE +Y++FL+ QV+ L
Sbjct: 291 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMD-TASMLDEAASYLKFLKTQVKAL 346
>gi|357445143|ref|XP_003592849.1| Transcription factor bHLH128 [Medicago truncatula]
gi|355481897|gb|AES63100.1| Transcription factor bHLH128 [Medicago truncatula]
Length = 343
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 257 PQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 316
Query: 235 YVQFLQNQVEFL 246
+++ LQ QV+ L
Sbjct: 317 HIKGLQTQVQKL 328
>gi|125527433|gb|EAY75547.1| hypothetical protein OsI_03453 [Oryza sativa Indica Group]
Length = 394
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++S+R+++LQKLVPG +K+ A MLDE +Y++FL++QV+ L
Sbjct: 283 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 338
>gi|28207148|gb|AAO37214.1| hypothetical protein [Arabidopsis thaliana]
Length = 416
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 13/134 (9%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
+SS F+ S+D S K+K G++ + + N+ +D E AK +H R R
Sbjct: 169 SSSKFSRGTSRD-LSCCSLKRKYGDIEEEESTYLSNN--SDDESDDAK----TQVHARTR 221
Query: 187 -----RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
R ++T+ H L ER RR++ +++M+ LQ L+P C K KA +LDE I Y++ LQ
Sbjct: 222 KPVTKRKRSTEVHKLYERKRRDEFNKKMRALQDLLPNCYK-DDKASLLDEAIKYMRTLQL 280
Query: 242 QVEFLSMKLASVNP 255
QV+ +SM + P
Sbjct: 281 QVQMMSMGNGLIRP 294
>gi|115439485|ref|NP_001044022.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|19571105|dbj|BAB86530.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|20804650|dbj|BAB92339.1| bHLH transcription factor-like [Oryza sativa Japonica Group]
gi|113533553|dbj|BAF05936.1| Os01g0707500 [Oryza sativa Japonica Group]
gi|125571756|gb|EAZ13271.1| hypothetical protein OsJ_03197 [Oryza sativa Japonica Group]
gi|215741088|dbj|BAG97583.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 46/57 (80%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++S+R+++LQKLVPG +K+ A MLDE +Y++FL++QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGNKMD-TASMLDEAASYLKFLKSQVQKL 337
>gi|356503978|ref|XP_003520776.1| PREDICTED: uncharacterized protein LOC100804665 [Glycine max]
Length = 513
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R RR + H+L+E+ RREKI+++M+ L++L+P C+KV KA MLD+ I+Y++ L+ Q+
Sbjct: 321 RVRRIRNPVVHNLSEKKRREKINKKMRTLKELIPNCNKV-DKASMLDDAIDYLKTLKLQL 379
Query: 244 EFLSM 248
+ +SM
Sbjct: 380 QIMSM 384
>gi|357115803|ref|XP_003559675.1| PREDICTED: uncharacterized protein LOC100838948 [Brachypodium
distachyon]
Length = 307
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 16/155 (10%)
Query: 120 KRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEE-----KENSPKADSEQKVAK 174
K ++T A+ K ++V + + G + K + EN E VA
Sbjct: 156 KIADQTRGRKCSRKAEPKRAKKVTHHEGEDGTIAATKGQSMSCCTSENDSNGSQESPVAA 215
Query: 175 EPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P R TD SL R RRE+I+ER+K+LQ LVP KV + ML+E +
Sbjct: 216 NPSGK------GRQSTTDPQSLYARKRRERINERLKVLQNLVPNGTKVD-ISTMLEEAVQ 268
Query: 235 YVQFLQNQVEFLSM-KLASVNPMFY---DFGMDLD 265
YV+FLQ Q++ LS + P+ Y + G+DL+
Sbjct: 269 YVKFLQLQIKLLSSDDMWMYAPIAYNGMNIGVDLN 303
>gi|326507862|dbj|BAJ86674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 45/57 (78%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++S+R+++LQKLVPG K+ A MLDE +Y++FL++QV+ L
Sbjct: 282 SSDPQTVAARLRRERVSDRLRVLQKLVPGGSKMD-TASMLDEAASYLKFLKSQVQAL 337
>gi|293331875|ref|NP_001169147.1| uncharacterized protein LOC100382992 [Zea mays]
gi|223975155|gb|ACN31765.1| unknown [Zea mays]
Length = 395
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R+RRE++SER+++LQ+LVPG ++ A MLDE Y++FL++QV+ L
Sbjct: 287 SSDPQTVAARLRRERVSERLRVLQRLVPGGSRMD-TASMLDEAAGYLKFLKSQVKAL 342
>gi|297794285|ref|XP_002865027.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
gi|297310862|gb|EFH41286.1| hypothetical protein ARALYDRAFT_496889 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 94 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 152
Query: 253 VNPMFYDFGMDLDNTFMVRPDDQ-QNLNSIIAASAS-----APQVQCSPTAQL 299
+NPM + +T + +Q NL +++AA S A Q C TA L
Sbjct: 153 LNPMRLPPVLPPTHTRINETLEQDMNLETLLAAPRSLEPPQATQEMCFSTATL 205
>gi|357519927|ref|XP_003630252.1| Transcription factor HEC3 [Medicago truncatula]
gi|355524274|gb|AET04728.1| Transcription factor HEC3 [Medicago truncatula]
Length = 275
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q++ L
Sbjct: 123 DPQSVAARHRRERISEKIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIKLL 176
>gi|297597040|ref|NP_001043364.2| Os01g0566800 [Oryza sativa Japonica Group]
gi|255673375|dbj|BAF05278.2| Os01g0566800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
++D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++Q+ L
Sbjct: 383 SSDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 438
>gi|342298426|emb|CBY05403.1| ALCATRAZ-like protein [Lepidium appelianum]
Length = 173
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYMKQLQLQVQTLAVMNGLG 155
Query: 253 VNPM 256
+NPM
Sbjct: 156 LNPM 159
>gi|52076245|dbj|BAD45013.1| bHLH transcription-like [Oryza sativa Japonica Group]
gi|52076301|dbj|BAD45086.1| bHLH transcription-like [Oryza sativa Japonica Group]
Length = 484
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++Q+ L
Sbjct: 372 SDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 426
>gi|6693022|gb|AAF24948.1|AC012375_11 T22C5.19 [Arabidopsis thaliana]
Length = 279
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
RA +G ATD SL R RREKI+ER+K LQ LVP KV + ML+E ++YV+FLQ Q+
Sbjct: 168 RATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTKVD-ISTMLEEAVHYVKFLQLQI 226
Query: 244 E 244
+
Sbjct: 227 K 227
>gi|77556977|gb|ABA99773.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 266
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
R A +H+L E+ RR KI+ER + LQ+LVPGCD + +A LD+ I Y++ LQ+Q+E
Sbjct: 79 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 138
Query: 246 LS 247
S
Sbjct: 139 TS 140
>gi|125526474|gb|EAY74588.1| hypothetical protein OsI_02477 [Oryza sativa Indica Group]
Length = 481
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++Q+ L
Sbjct: 368 SDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 422
>gi|226493752|ref|NP_001140849.1| uncharacterized protein LOC100272925 [Zea mays]
gi|194690530|gb|ACF79349.1| unknown [Zea mays]
gi|194701428|gb|ACF84798.1| unknown [Zea mays]
gi|223949911|gb|ACN29039.1| unknown [Zea mays]
gi|413919543|gb|AFW59475.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 214
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 15/102 (14%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
RR ++ D H+ +ER RR++I+E+++ LQ+L+P C K T K MLDE I+Y++ LQ Q++
Sbjct: 16 RRSRSADFHNFSERRRRDRINEKLRALQELLPNCTK-TDKVSMLDEAIDYLKSLQLQLQM 74
Query: 246 LSM-KLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASA 286
L M K + P +V P+ QQ ++ I A A
Sbjct: 75 LVMGKGGGMAP-------------VVPPELQQYMHYITADPA 103
>gi|125570859|gb|EAZ12374.1| hypothetical protein OsJ_02263 [Oryza sativa Japonica Group]
Length = 484
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+D ++A R RRE+ISER+++LQKLVPG K+ A MLDE NY++FL++Q+ L
Sbjct: 372 SDPQTVAARQRRERISERLRVLQKLVPGGAKMD-TASMLDEAANYLRFLKSQIREL 426
>gi|218187189|gb|EEC69616.1| hypothetical protein OsI_38990 [Oryza sativa Indica Group]
Length = 379
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEF 245
R A +H+L E+ RR KI+ER + LQ+LVPGCD + +A LD+ I Y++ LQ+Q+E
Sbjct: 192 RHRHAAGAHNLTEKRRRFKITERFRTLQRLVPGCDNKSNQASTLDQTIQYMKSLQHQLEA 251
Query: 246 LS 247
S
Sbjct: 252 TS 253
>gi|225458663|ref|XP_002284880.1| PREDICTED: transcription factor SPATULA [Vitis vinifera]
gi|302142294|emb|CBI19497.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%), Gaps = 2/69 (2%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M+
Sbjct: 188 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTMR 246
Query: 250 LA-SVNPMF 257
S++P++
Sbjct: 247 NGLSLHPIY 255
>gi|116785394|gb|ABK23705.1| unknown [Picea sitchensis]
Length = 333
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+
Sbjct: 152 SKRSRAAEVHNLSEKRRRNRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKKLQLQVQ 210
Query: 245 FLSMK 249
LS +
Sbjct: 211 MLSAR 215
>gi|255552420|ref|XP_002517254.1| hypothetical protein RCOM_1461320 [Ricinus communis]
gi|223543625|gb|EEF45154.1| hypothetical protein RCOM_1461320 [Ricinus communis]
Length = 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 160 KENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGC 219
KE K + Q V +P Y R + D S+A R RRE+ISE+++ILQ+LVPG
Sbjct: 75 KEMMFKIAAMQPVNIDPATIYKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGG 134
Query: 220 DKVTGKAFMLDEIINYVQFLQNQVEFL 246
K+ A MLDE I YV+FL+ Q+ L
Sbjct: 135 TKMD-TASMLDEAIRYVKFLKKQIRLL 160
>gi|54306640|gb|AAV33474.1| basic helix-loop-helix protein [Fragaria x ananassa]
Length = 298
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSMK 249
A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ LSM+
Sbjct: 145 AAEVHNLSEKRRRSRINEKMKALQNLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLSMR 203
Query: 250 LA-SVNPM 256
S++PM
Sbjct: 204 NGMSLHPM 211
>gi|342298438|emb|CBY05409.1| ALCATRAZ-like protein [Lepidium campestre]
Length = 197
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 97 HNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 155
Query: 253 VNPMFYDFGMDLDNTFMVRPDDQ-QNLNSIIAASASA 288
+NPM + T + +Q QNL + +A S S
Sbjct: 156 LNPMQLPPVLPQTQTRINETLEQDQNLETFLATSQSC 192
>gi|414878955|tpg|DAA56086.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 227
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISER+++LQ+LVPG K+ A MLDE I Y++FL+ QV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTKMD-TASMLDEAIRYIKFLKRQVQEL 215
>gi|413921524|gb|AFW61456.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 288
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISER+++LQ+LVPG K+ A MLDE I Y++FL+ QV+ L
Sbjct: 162 DPQSVAARHRRERISERVRVLQRLVPGGTKMD-TASMLDEAIRYIKFLKRQVQEL 215
>gi|413921523|gb|AFW61455.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 287
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISER+++LQ+LVPG K+ A MLDE I Y++FL+ QV+ L
Sbjct: 161 DPQSVAARHRRERISERVRVLQRLVPGGTKMD-TASMLDEAIRYIKFLKRQVQEL 214
>gi|414868827|tpg|DAA47384.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
Length = 339
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+RR ++H+L E+ RR KI+ER K LQ++VPGC K + +A LD+ I+Y++ LQ+QV+
Sbjct: 175 SRRSHHGEAHNLTEKRRRHKINERFKTLQQIVPGCSK-SNQASTLDQTIHYMKSLQHQVQ 233
Query: 245 FLS 247
+S
Sbjct: 234 AMS 236
>gi|297843372|ref|XP_002889567.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297335409|gb|EFH65826.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 270 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 329
Query: 235 YVQFLQNQVEFL 246
+++ LQ+Q++ L
Sbjct: 330 HIKGLQHQLQNL 341
>gi|18390573|ref|NP_563749.1| transcription factor bHLH128 [Arabidopsis thaliana]
gi|75299737|sp|Q8H102.1|BH128_ARATH RecName: Full=Transcription factor bHLH128; AltName: Full=Basic
helix-loop-helix protein 128; Short=AtbHLH128;
Short=bHLH 128; AltName: Full=Transcription factor EN
74; AltName: Full=bHLH transcription factor bHLH128
gi|24030386|gb|AAN41354.1| unknown protein [Arabidopsis thaliana]
gi|332189775|gb|AEE27896.1| transcription factor bHLH128 [Arabidopsis thaliana]
Length = 362
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 235 YVQFLQNQVEFL 246
+++ LQ+Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|15240202|ref|NP_201512.1| transcription factor ALC [Arabidopsis thaliana]
gi|75309083|sp|Q9FHA2.1|ALC_ARATH RecName: Full=Transcription factor ALC; AltName: Full=Basic
helix-loop-helix protein 73; Short=AtbHLH73; Short=bHLH
73; AltName: Full=Protein ALCATRAZ; AltName:
Full=Transcription factor EN 98; AltName: Full=bHLH
transcription factor bHLH073
gi|10177598|dbj|BAB10945.1| unnamed protein product [Arabidopsis thaliana]
gi|114050687|gb|ABI49493.1| At5g67110 [Arabidopsis thaliana]
gi|332010918|gb|AED98301.1| transcription factor ALC [Arabidopsis thaliana]
Length = 210
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 253 VNPM 256
+NPM
Sbjct: 157 LNPM 160
>gi|342298442|emb|CBY05411.1| ALCATRAZ-like protein [Aethionema carneum]
Length = 224
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 183 VRAR-RGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQN 241
VR R R H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ
Sbjct: 97 VRTRQRSIDAKFHNLSEKRRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQL 155
Query: 242 QVEFLS-MKLASVNPM 256
QV+ L+ M +NPM
Sbjct: 156 QVQALAVMNGLGLNPM 171
>gi|297744077|emb|CBI37047.3| unnamed protein product [Vitis vinifera]
Length = 200
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%), Gaps = 1/64 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R ++ + HSL+E+ RR++I+++M+ LQ+L+P C KV K +LDE I+Y++ LQ QV+
Sbjct: 10 SKRNRSAEGHSLSEKRRRDRINKKMRSLQELIPNCKKVD-KISILDEAIDYLKTLQLQVQ 68
Query: 245 FLSM 248
+SM
Sbjct: 69 VMSM 72
>gi|21536863|gb|AAM61195.1| unknown [Arabidopsis thaliana]
Length = 210
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 253 VNPM 256
+NPM
Sbjct: 157 LNPM 160
>gi|312282787|dbj|BAJ34259.1| unnamed protein product [Thellungiella halophila]
Length = 353
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 266 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 325
Query: 235 YVQFLQNQVEFL 246
+++ LQ+Q++ L
Sbjct: 326 HIKGLQHQLQNL 337
>gi|21554238|gb|AAM63313.1| Contains similarity to bHLH transcription factor GBOF-1 from Tulipa
gesneriana gb|AF185269 [Arabidopsis thaliana]
Length = 362
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 177 PKDYI--HVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P+D + +RA+RG AT S+AER RR +IS ++K LQ LVP DK T + MLD +
Sbjct: 275 PEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQ 334
Query: 235 YVQFLQNQVEFL 246
+++ LQ+Q++ L
Sbjct: 335 HIKGLQHQLQNL 346
>gi|223702410|gb|ACN21636.1| putative basic helix-loop-helix protein BHLH12 [Lotus japonicus]
Length = 247
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 102 DPASVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRLL 155
>gi|51970054|dbj|BAD43719.1| putative bHLH transcription factor (bHLH073/ALCATRAZ) [Arabidopsis
thaliana]
Length = 210
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 194 HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS-MKLAS 252
H+L+E+ RR KI+E+MK LQKL+P +K T KA MLDE I Y++ LQ QV+ L+ M
Sbjct: 98 HNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDEAIEYLKQLQLQVQTLAVMNGLG 156
Query: 253 VNPM 256
+NPM
Sbjct: 157 LNPM 160
>gi|224083420|ref|XP_002307019.1| predicted protein [Populus trichocarpa]
gi|222856468|gb|EEE94015.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R+RRE+ISE+++ILQ+LVPG K+ A ML+E I YV+FL+ Q+ L
Sbjct: 113 DPQSVAARLRRERISEKIRILQRLVPGGRKMD-TASMLEEAIRYVKFLKRQIRLL 166
>gi|242062246|ref|XP_002452412.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
gi|241932243|gb|EES05388.1| hypothetical protein SORBIDRAFT_04g025260 [Sorghum bicolor]
Length = 338
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T A MLD + +++ LQ++
Sbjct: 262 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTADMLDLAVEHIKGLQSE 321
Query: 243 VEFL 246
++ L
Sbjct: 322 LQAL 325
>gi|302804013|ref|XP_002983759.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
gi|300148596|gb|EFJ15255.1| hypothetical protein SELMODRAFT_118904 [Selaginella moellendorffii]
Length = 89
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R +R +A + H+L+ER RR++I+E+M+ LQ+L+P +K T KA MLDE I Y++ LQ Q+
Sbjct: 12 RPKRSRAAEVHNLSERRRRDRINEKMRALQELIPNSNK-TDKASMLDEAIEYLKMLQLQL 70
Query: 244 EFLSMKL 250
+ ++L
Sbjct: 71 QVPKIEL 77
>gi|223702408|gb|ACN21635.1| putative basic helix-loop-helix protein BHLH11 [Lotus japonicus]
Length = 495
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 7/77 (9%)
Query: 170 QKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFML 229
++VA++P + + + ++D ++A R RRE+IS+R+++LQK+VPG K+ A ML
Sbjct: 378 EEVAEKPKRKNVKI------SSDPQTVAARQRRERISDRIRVLQKIVPGGSKM-DTASML 430
Query: 230 DEIINYVQFLQNQVEFL 246
DE NY++FL++QV+ L
Sbjct: 431 DEAANYLKFLRSQVKAL 447
>gi|140084376|gb|ABO84935.1| Rhd6-like 6 [Physcomitrella patens]
Length = 67
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 188 GQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
G ATD S+ R RREKI+ER+K LQ LVP KV MLDE I+YV+FLQ QVE L
Sbjct: 1 GSATDPQSVYARHRREKINERLKNLQNLVPNGAKV-DIVTMLDEAIHYVKFLQTQVELL 58
>gi|42573075|ref|NP_974634.1| transcription factor bHLH23 [Arabidopsis thaliana]
gi|332660144|gb|AEE85544.1| transcription factor bHLH23 [Arabidopsis thaliana]
Length = 340
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
++R +A H L+ER RR+KI+E MK LQ+L+P C K T ++ MLD++I YV+ LQ+Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 245 FLSMKL 250
+++
Sbjct: 332 GKHLRI 337
>gi|357147361|ref|XP_003574317.1| PREDICTED: transcription factor UNE10-like isoform 1 [Brachypodium
distachyon]
Length = 460
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 16/130 (12%)
Query: 117 MDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
+D T ++SF + D R + Q+ G ++A E V KE
Sbjct: 199 LDHGSPEETTENTSFGGGAASDSRYFSRRSQRDGLCDEA-------------ETVVIKEE 245
Query: 177 PKDYIH--VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P + + +R +A H+ +ER RR++I+++M+ LQKLVP K T KA MLDE+I
Sbjct: 246 PPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIE 304
Query: 235 YVQFLQNQVE 244
+++ LQ QV+
Sbjct: 305 HLKQLQAQVQ 314
>gi|224124904|ref|XP_002319451.1| predicted protein [Populus trichocarpa]
gi|222857827|gb|EEE95374.1| predicted protein [Populus trichocarpa]
Length = 59
Score = 61.6 bits (148), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 186 RRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+RG+A + H+L+ER RR++I+E+M+ LQ+L+P C+KV KA MLDE I Y++ LQ QV+
Sbjct: 1 KRGRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVD-KASMLDEAIEYLKTLQLQVQ 58
>gi|357147364|ref|XP_003574318.1| PREDICTED: transcription factor UNE10-like isoform 2 [Brachypodium
distachyon]
Length = 453
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 16/130 (12%)
Query: 117 MDKKRKNRTNASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEP 176
+D T ++SF + D R + Q+ G ++A E V KE
Sbjct: 199 LDHGSPEETTENTSFGGGAASDSRYFSRRSQRDGLCDEA-------------ETVVIKEE 245
Query: 177 PKDYIH--VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
P + + +R +A H+ +ER RR++I+++M+ LQKLVP K T KA MLDE+I
Sbjct: 246 PPMRMRSSISTKRSRAAAIHNESERKRRDRINQKMQTLQKLVPNSSK-TDKASMLDEVIE 304
Query: 235 YVQFLQNQVE 244
+++ LQ QV+
Sbjct: 305 HLKQLQAQVQ 314
>gi|356495899|ref|XP_003516808.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 458
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
V +R +A H+ +ER RR+KI++RMK LQKLVP K + KA MLDE+I Y++ LQ Q
Sbjct: 264 VSTKRSRAAAIHNQSERKRRDKINQRMKTLQKLVPNSSK-SDKASMLDEVIEYLKQLQAQ 322
Query: 243 VEFL 246
++ +
Sbjct: 323 LQMI 326
>gi|242084060|ref|XP_002442455.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
gi|241943148|gb|EES16293.1| hypothetical protein SORBIDRAFT_08g020275 [Sorghum bicolor]
Length = 155
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
ARR ++H+L E+ RR KI +++K L++LVPGCD + +A +LD+ I +++ LQ Q++
Sbjct: 19 ARRSHPAETHNLTEKRRRRKIDDKLKTLRQLVPGCDDKSNQASILDQTIQHIKSLQQQIQ 78
Query: 245 FLSMKLASVNPMFYDFGMDLDNTFMVRP 272
V P G D V P
Sbjct: 79 --------VQPKAISLGCDAIKPPAVYP 98
>gi|356518753|ref|XP_003528042.1| PREDICTED: uncharacterized protein LOC100803688 [Glycine max]
Length = 234
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 118 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAILYVKFLKRQIRLL 171
>gi|222617607|gb|EEE53739.1| hypothetical protein OsJ_00092 [Oryza sativa Japonica Group]
Length = 310
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 34/218 (15%)
Query: 37 PTHDDHQEMIVVNNNSNNLLDAAAVFETSCGDNHDH----HSDD---NCNEPSNNNSLAT 89
P DD + ++ + +++ +V G+N+ H H EP SL T
Sbjct: 87 PGGDDDDCAMWMDAAAGAMVENTSVVAGG-GNNYCHRLQFHGGAPGFRTREPRPLRSLTT 145
Query: 90 KNQSTAVSSTEQQVTQSTVTTTATTTRMDKKRKNRTNASSSFNSAQSKDPREVKSKKQKK 149
++ST +S + Q R R+ R N + QS + R K+ +K
Sbjct: 146 ASKSTRATSASRHRRQ---------PRSAHAREFRVNQQYNLCVPQSGEARAAGKKQCRK 196
Query: 150 GNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRARRGQATDSHSLAERVRREKISERM 209
G+ + SP KE P+ S A +VRRE+ISER+
Sbjct: 197 GSKPNKAASASSPSPSPSPSPSPNKEQPQ----------------SAAAKVRRERISERL 240
Query: 210 KILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS 247
K+LQ LVP KV ML++ INYV+FLQ QV+ L+
Sbjct: 241 KVLQDLVPNGTKVD-LVTMLEKAINYVKFLQLQVKVLA 277
>gi|222624408|gb|EEE58540.1| hypothetical protein OsJ_09836 [Oryza sativa Japonica Group]
Length = 324
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER+KILQ L+P KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 250 LASVNPMFYDFGMDLDNTFMVRPDDQQ 276
+ P+ Y+ G+++ + P QQ
Sbjct: 299 MWMFAPIAYN-GVNVGLDLKISPPQQQ 324
>gi|108706746|gb|ABF94541.1| Helix-loop-helix DNA-binding domain containing protein [Oryza
sativa Japonica Group]
Length = 324
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER+KILQ L+P KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 250 LASVNPMFYDFGMDLDNTFMVRPDDQQ 276
+ P+ Y+ G+++ + P QQ
Sbjct: 299 MWMFAPIAYN-GVNVGLDLKISPPQQQ 324
>gi|357142794|ref|XP_003572696.1| PREDICTED: transcription factor bHLH128-like [Brachypodium
distachyon]
Length = 317
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 45/64 (70%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
VRA+RG AT S+AER RR +ISE+++ LQ LVP DK T + MLD + +++ LQ+Q
Sbjct: 241 VRAKRGCATHPRSIAERERRTRISEKLRKLQDLVPNMDKQTSTSDMLDLAVEHIKGLQSQ 300
Query: 243 VEFL 246
++ +
Sbjct: 301 LQAM 304
>gi|255561634|ref|XP_002521827.1| DNA binding protein, putative [Ricinus communis]
gi|223539040|gb|EEF40637.1| DNA binding protein, putative [Ricinus communis]
Length = 284
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
VRA+RG AT S+AERVRR +IS+R++ LQ+LVP DK T A MLDE +
Sbjct: 192 VRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTADMLDEAVG 243
>gi|218192293|gb|EEC74720.1| hypothetical protein OsI_10445 [Oryza sativa Indica Group]
Length = 324
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM-K 249
TD SL R RRE+I+ER+KILQ L+P KV + ML+E ++YV+FLQ Q++ LS
Sbjct: 240 TDPQSLYARKRRERINERLKILQNLIPNGTKVD-ISTMLEEAVHYVKFLQLQIKLLSSDD 298
Query: 250 LASVNPMFYDFGMDLDNTFMVRPDDQQ 276
+ P+ Y+ G+++ + P QQ
Sbjct: 299 MWMFAPIAYN-GVNVGLDLKISPPQQQ 324
>gi|357444405|ref|XP_003592480.1| Transcription factor bHLH84 [Medicago truncatula]
gi|355481528|gb|AES62731.1| Transcription factor bHLH84 [Medicago truncatula]
Length = 330
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
R G A+D + + RRE+I+ER+KILQ LVP KV + ML+E + YV+FLQ Q+
Sbjct: 239 RCNGGSASDPQGVYAKKRRERINERLKILQSLVPNGTKVD-ISTMLEEAVQYVKFLQVQI 297
Query: 244 EFLS 247
+ LS
Sbjct: 298 KLLS 301
>gi|302754898|ref|XP_002960873.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
gi|300171812|gb|EFJ38412.1| hypothetical protein SELMODRAFT_402301 [Selaginella moellendorffii]
Length = 638
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 183 VRARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQ 242
+RARRG AT S+AERVRR KISE +K L LVP DK T A ML+ + Y++ L+ +
Sbjct: 557 LRARRGCATHPRSVAERVRRTKISEGIKRLHDLVPNMDKQTNTADMLNHAMEYMKQLKEK 616
Query: 243 VEFLSMKL 250
+E + +L
Sbjct: 617 IEQMKEEL 624
>gi|297798162|ref|XP_002866965.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
gi|297312801|gb|EFH43224.1| hypothetical protein ARALYDRAFT_353119 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 176 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 234
Query: 249 K 249
+
Sbjct: 235 R 235
>gi|22327541|ref|NP_680385.1| transcription factor bHLH139 [Arabidopsis thaliana]
gi|122213858|sp|Q3E7L7.1|BH139_ARATH RecName: Full=Transcription factor bHLH139; AltName: Full=Basic
helix-loop-helix protein 139; Short=AtbHLH139;
Short=bHLH 139; AltName: Full=Transcription factor EN
116; AltName: Full=bHLH transcription factor bHLH139
gi|332007536|gb|AED94919.1| transcription factor bHLH139 [Arabidopsis thaliana]
Length = 223
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQV 243
+A RG A+D SL R RRE+I++R+K LQ LVP KV + ML++ ++YV+FLQ Q+
Sbjct: 133 KANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTKVD-ISTMLEDAVHYVKFLQLQI 191
Query: 244 EFLS 247
+ LS
Sbjct: 192 KLLS 195
>gi|449502773|ref|XP_004161738.1| PREDICTED: transcription factor HEC2-like [Cucumis sativus]
Length = 171
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 127 ASSSFNSAQSKDPREVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIHVRAR 186
+S F + + P E +++++ G +E + + Q V +P + I R
Sbjct: 51 GTSLFQTTPTIIP-ETPARQRRSGVSGGGMAAMREMIFRIAAMQPVEIDP--EAIKAPKR 107
Query: 187 RGQ--ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
R + D S+A R RRE+IS++++ILQ+LVPG K+ A MLDE ++YV+FL+ QV+
Sbjct: 108 RNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKM-DTASMLDEAVHYVKFLKRQVQ 166
Query: 245 FL 246
L
Sbjct: 167 TL 168
>gi|357511681|ref|XP_003626129.1| Transcription factor PIF3 [Medicago truncatula]
gi|355501144|gb|AES82347.1| Transcription factor PIF3 [Medicago truncatula]
Length = 682
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVE 244
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P C+K KA MLDE I Y++ LQ Q++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKAD-KASMLDEAIEYLKSLQLQLQ 483
Query: 245 FLSMKLASV-NPMFYDFGM 262
+SM + PM GM
Sbjct: 484 IMSMGGGGLYMPMTLPAGM 502
>gi|356506557|ref|XP_003522046.1| PREDICTED: transcription factor UNE10-like [Glycine max]
Length = 397
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 17/137 (12%)
Query: 124 RTNASSSFNSAQSKDPR-EVKSKKQKKGNVNDAKKEEKENSPKADSEQKVAKEPPKDYIH 182
R S +FNSA P S KQ G + +++++ S+ +V P +DY
Sbjct: 166 RRELSVTFNSATKGSPENTTSSGKQCTGTTTN---DDRDSISHRISQGEV---PDEDYKA 219
Query: 183 VRARRGQATDS--------HSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
+ R ++ H +ER RR+KI++RMK LQKLVP K T KA MLDE+I
Sbjct: 220 TKVDRSSGSNKRIKANSVVHKQSERRRRDKINQRMKELQKLVPNSSK-TDKASMLDEVIQ 278
Query: 235 YVQFLQNQVEFLS-MKL 250
Y++ LQ QV+ ++ MK+
Sbjct: 279 YMKQLQAQVQMMNWMKM 295
>gi|18419937|ref|NP_568010.1| transcription factor SPATULA [Arabidopsis thaliana]
gi|75309699|sp|Q9FUA4.1|SPT_ARATH RecName: Full=Transcription factor SPATULA; AltName: Full=Basic
helix-loop-helix protein 24; Short=AtbHLH24; Short=bHLH
24; AltName: Full=Transcription factor EN 99; AltName:
Full=bHLH transcription factor bHLH024
gi|11245494|gb|AAG33640.1|AF319540_1 SPATULA [Arabidopsis thaliana]
gi|110738410|dbj|BAF01131.1| putative bHLH transcription factor (AtbHLH024) / SPATULA (SPT)
[Arabidopsis thaliana]
gi|111074392|gb|ABH04569.1| At4g36930 [Arabidopsis thaliana]
gi|332661320|gb|AEE86720.1| transcription factor SPATULA [Arabidopsis thaliana]
Length = 373
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 189 QATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
+A + H+L+E+ RR +I+E+MK LQ L+P +K T KA MLDE I Y++ LQ QV+ L+M
Sbjct: 197 RAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQMLTM 255
Query: 249 K 249
+
Sbjct: 256 R 256
>gi|357120420|ref|XP_003561925.1| PREDICTED: uncharacterized protein LOC100831403 [Brachypodium
distachyon]
Length = 337
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 191 TDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLS--- 247
TD SL R RREKI+ER+K+LQ LVP KV + ML+E ++Y++F+Q Q++ LS
Sbjct: 254 TDPQSLYARKRREKINERLKVLQNLVPNGTKVD-ISTMLEEAVHYIKFMQLQIKLLSSDD 312
Query: 248 -MKLASVNPMFYDFGMDL 264
A + ++ G+DL
Sbjct: 313 MWMFAPIAYNGFNVGLDL 330
>gi|168030856|ref|XP_001767938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680780|gb|EDQ67213.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 527
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 15/115 (13%)
Query: 178 KDYIHVRARRGQ---ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIIN 234
++ + +R +R + D S+A R RRE+IS+R+++LQ VPG K+ A MLDE I+
Sbjct: 374 EEIVQLRPKRRNVRISKDPQSVAARHRRERISDRVRVLQHFVPGGTKM-DTASMLDEAIH 432
Query: 235 YVQFLQNQVEFLSMKLASVNPMFYDFGMDLDNTFMVRPDDQQNLNSIIAASASAP 289
YV+FLQ Q++ L G D FM +P L + A+++ P
Sbjct: 433 YVKFLQQQLQTLE-----------RIGNMSDPRFMTQPGGPMILPQVGASTSMRP 476
>gi|168056351|ref|XP_001780184.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668417|gb|EDQ55025.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 484
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 44/57 (77%), Gaps = 1/57 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
+ D+ S+A R RRE+IS+R+++LQ+LVPG K+ A MLDE I+Y++FL+ Q++ L
Sbjct: 370 SIDTQSVAARHRRERISDRIRVLQRLVPGGTKMD-TASMLDEAIHYIKFLKQQLQTL 425
>gi|356571031|ref|XP_003553685.1| PREDICTED: uncharacterized protein LOC100784724 [Glycine max]
Length = 518
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 184 RARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQF--LQN 241
R +R + + H+L+E+ RREKI+++M+ L+ L+P C+KV KA MLD+ I+Y++ LQ
Sbjct: 331 RVKRSRNPEVHNLSEKKRREKINKKMRTLKDLIPNCNKV-DKASMLDDAIDYLKTLKLQL 389
Query: 242 QVEFLSMKLAS-VNPMFYDF 260
Q F M + S + P+ F
Sbjct: 390 QANFQIMSMGSGLWPLMMGF 409
>gi|296088569|emb|CBI37560.3| unnamed protein product [Vitis vinifera]
Length = 136
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 192 DSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFL 246
D S+A R RRE+ISE+++ILQ+LVPG K+ A MLDE I YV+FL+ Q+ L
Sbjct: 34 DPQSVAARHRRERISEKIRILQRLVPGGTKMD-TASMLDEAIRYVKFLKRQIRQL 87
>gi|87241328|gb|ABD33186.1| Helix-loop-helix DNA-binding [Medicago truncatula]
Length = 689
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 56/85 (65%), Gaps = 7/85 (8%)
Query: 185 ARRGQATDSHSLAERVRREKISERMKILQKLVPGCDKV------TGKAFMLDEIINYVQF 238
+++ ++T+ H+L+ER RR++I+ERM+ LQ+L+P C+KV KA MLDE I Y++
Sbjct: 425 SKKNRSTEVHNLSERRRRDRINERMRALQELIPNCNKVDLFFLQADKASMLDEAIEYLKS 484
Query: 239 LQNQVEFLSMKLASV-NPMFYDFGM 262
LQ Q++ +SM + PM GM
Sbjct: 485 LQLQLQIMSMGGGGLYMPMTLPAGM 509
>gi|302759943|ref|XP_002963394.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
gi|300168662|gb|EFJ35265.1| hypothetical protein SELMODRAFT_405220 [Selaginella moellendorffii]
Length = 459
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 190 ATDSHSLAERVRREKISERMKILQKLVPGCDKVTGKAFMLDEIINYVQFLQNQVEFLSM 248
++D ++A R RRE+IS +++ILQ+LVPG K+ A MLDE I+YV++L++QV+ + M
Sbjct: 290 SSDPQTVAARHRRERISTKIRILQRLVPGGTKMD-TASMLDEAIHYVKYLKSQVQAMEM 347
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.125 0.355
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,543,062,259
Number of Sequences: 23463169
Number of extensions: 222025541
Number of successful extensions: 1478845
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2256
Number of HSP's successfully gapped in prelim test: 7178
Number of HSP's that attempted gapping in prelim test: 1397419
Number of HSP's gapped (non-prelim): 66155
length of query: 370
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 226
effective length of database: 8,980,499,031
effective search space: 2029592781006
effective search space used: 2029592781006
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)