Query 017498
Match_columns 370
No_of_seqs 132 out of 785
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 09:05:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017498.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017498hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01301 GPH_sucrose GPH fami 100.0 3.2E-58 6.9E-63 469.1 23.2 309 3-370 85-397 (477)
2 KOG0637 Sucrose transporter an 100.0 1.2E-57 2.7E-62 450.2 14.4 308 1-370 111-423 (498)
3 PF13347 MFS_2: MFS/sugar tran 99.7 1.4E-16 3.1E-21 160.3 14.6 246 19-369 57-331 (428)
4 PRK10429 melibiose:sodium symp 99.5 8.2E-12 1.8E-16 127.8 21.6 228 19-330 62-316 (473)
5 TIGR00792 gph sugar (Glycoside 99.4 7.9E-12 1.7E-16 125.1 20.4 226 19-330 55-307 (437)
6 PRK09669 putative symporter Ya 99.2 1.3E-09 2.8E-14 110.4 20.9 220 19-330 65-314 (444)
7 PRK11462 putative transporter; 99.2 1.7E-09 3.8E-14 110.6 21.8 219 19-330 65-313 (460)
8 COG2211 MelB Na+/melibiose sym 99.2 1E-09 2.2E-14 111.8 19.3 226 19-331 68-323 (467)
9 TIGR00901 2A0125 AmpG-related 99.1 4.8E-09 1E-13 102.3 17.4 198 50-330 96-295 (356)
10 TIGR00900 2A0121 H+ Antiporter 99.0 2.2E-08 4.7E-13 96.5 17.9 194 48-331 103-298 (365)
11 TIGR00710 efflux_Bcr_CflA drug 98.9 9.9E-08 2.2E-12 93.2 19.3 189 48-330 104-292 (385)
12 PRK09848 glucuronide transport 98.9 1.3E-07 2.7E-12 95.9 20.0 87 229-330 228-314 (448)
13 PRK10473 multidrug efflux syst 98.8 2.9E-07 6.2E-12 91.1 19.6 188 49-331 103-290 (392)
14 PRK11551 putative 3-hydroxyphe 98.8 2.8E-07 6E-12 91.4 16.7 193 46-329 112-304 (406)
15 TIGR00893 2A0114 d-galactonate 98.7 5.7E-07 1.2E-11 86.8 17.7 191 46-311 91-282 (399)
16 TIGR00899 2A0120 sugar efflux 98.7 6.4E-07 1.4E-11 87.3 17.6 180 53-329 103-284 (375)
17 PF07690 MFS_1: Major Facilita 98.7 8.7E-08 1.9E-12 91.9 11.2 200 47-331 95-294 (352)
18 PRK11102 bicyclomycin/multidru 98.7 1.3E-06 2.7E-11 85.6 17.6 183 48-322 90-272 (377)
19 PRK11195 lysophospholipid tran 98.6 1.5E-06 3.2E-11 86.8 17.7 178 50-318 101-279 (393)
20 PF05977 MFS_3: Transmembrane 98.6 8.5E-07 1.8E-11 92.5 15.3 206 52-369 117-323 (524)
21 TIGR00886 2A0108 nitrite extru 98.6 2.1E-06 4.5E-11 83.5 17.0 205 52-329 105-310 (366)
22 PF03209 PUCC: PUCC protein; 98.6 4.5E-06 9.8E-11 83.5 18.9 227 18-331 33-296 (403)
23 PRK03545 putative arabinose tr 98.6 3.7E-06 8E-11 83.4 18.3 170 55-324 115-284 (390)
24 PRK11010 ampG muropeptide tran 98.6 2E-06 4.4E-11 88.8 16.3 80 48-142 118-197 (491)
25 PRK14995 methyl viologen resis 98.5 3E-06 6.5E-11 87.3 16.8 221 57-331 114-346 (495)
26 TIGR00881 2A0104 phosphoglycer 98.5 2.9E-06 6.3E-11 81.9 15.7 186 48-308 94-280 (379)
27 TIGR00895 2A0115 benzoate tran 98.5 1.9E-06 4.1E-11 84.0 14.3 84 45-143 113-196 (398)
28 PRK08633 2-acyl-glycerophospho 98.5 3.3E-06 7.2E-11 94.9 18.1 205 50-331 116-320 (1146)
29 cd06174 MFS The Major Facilita 98.5 8.8E-06 1.9E-10 77.4 18.4 168 45-331 95-263 (352)
30 TIGR00879 SP MFS transporter, 98.5 4.2E-06 9E-11 83.3 15.8 80 48-143 138-220 (481)
31 TIGR00883 2A0106 metabolite-pr 98.5 5.3E-06 1.2E-10 80.5 16.1 190 49-322 108-297 (394)
32 PRK09874 drug efflux system pr 98.5 9.9E-06 2.2E-10 80.0 17.9 188 53-331 122-309 (408)
33 PRK11902 ampG muropeptide tran 98.5 8.1E-06 1.8E-10 81.4 17.3 74 54-142 111-184 (402)
34 PRK10489 enterobactin exporter 98.5 7.4E-06 1.6E-10 81.9 17.0 73 54-142 127-199 (417)
35 TIGR00711 efflux_EmrB drug res 98.4 5E-06 1.1E-10 84.2 15.8 228 48-328 101-339 (485)
36 PRK10091 MFS transport protein 98.4 9.7E-06 2.1E-10 80.3 17.1 182 51-331 105-286 (382)
37 PRK06814 acylglycerophosphoeth 98.4 4.1E-06 8.9E-11 94.6 16.1 187 53-329 124-310 (1140)
38 PF11700 ATG22: Vacuole efflux 98.4 1.3E-05 2.8E-10 82.8 17.9 194 48-322 137-361 (477)
39 PRK11128 putative 3-phenylprop 98.4 1.4E-05 3.1E-10 79.1 17.1 185 50-331 107-291 (382)
40 TIGR00898 2A0119 cation transp 98.4 1.1E-05 2.3E-10 82.8 16.3 78 47-143 190-267 (505)
41 TIGR00891 2A0112 putative sial 98.4 2.1E-05 4.6E-10 77.0 17.3 80 49-142 112-191 (405)
42 PRK10213 nepI ribonucleoside t 98.3 3.7E-05 8E-10 76.9 18.3 80 48-142 119-198 (394)
43 TIGR00712 glpT glycerol-3-phos 98.3 6E-05 1.3E-09 76.2 18.4 181 54-310 135-317 (438)
44 PRK15011 sugar efflux transpor 98.2 4.4E-05 9.4E-10 76.0 16.5 69 60-143 128-198 (393)
45 TIGR00902 2A0127 phenyl propri 98.2 3.9E-05 8.5E-10 76.0 16.1 87 229-331 205-291 (382)
46 PRK15403 multidrug efflux syst 98.2 0.00012 2.7E-09 73.6 19.9 73 55-142 122-194 (413)
47 TIGR00890 2A0111 Oxalate/Forma 98.2 5.4E-05 1.2E-09 73.0 16.6 47 285-331 245-291 (377)
48 PRK11646 multidrug resistance 98.2 9.3E-05 2E-09 74.1 18.3 78 48-141 110-187 (400)
49 PRK10077 xylE D-xylose transpo 98.2 4.6E-05 9.9E-10 77.3 16.0 86 50-143 133-218 (479)
50 PRK10133 L-fucose transporter; 98.2 7.8E-05 1.7E-09 75.8 17.1 85 231-329 260-344 (438)
51 PRK10642 proline/glycine betai 98.1 9.5E-05 2.1E-09 76.1 17.2 87 49-143 130-216 (490)
52 PRK15402 multidrug efflux syst 98.1 0.00015 3.3E-09 72.1 18.0 72 56-142 120-191 (406)
53 PRK05122 major facilitator sup 98.1 0.00013 2.7E-09 72.3 16.8 42 54-95 129-170 (399)
54 PRK10504 putative transporter; 98.1 0.00012 2.5E-09 74.4 16.8 229 50-330 111-347 (471)
55 PRK12307 putative sialic acid 98.1 0.00013 2.9E-09 72.7 16.9 46 49-94 118-163 (426)
56 PRK12382 putative transporter; 98.1 0.00011 2.3E-09 72.8 16.0 41 55-95 130-170 (392)
57 COG2814 AraJ Arabinose efflux 98.1 0.00014 3E-09 73.1 16.6 186 48-331 112-297 (394)
58 TIGR01272 gluP glucose/galacto 98.1 0.00027 5.9E-09 68.7 18.4 209 39-325 12-223 (310)
59 PRK11663 regulatory protein Uh 98.1 0.00026 5.6E-09 71.5 18.8 75 54-143 128-202 (434)
60 PRK10054 putative transporter; 98.1 3.5E-05 7.7E-10 77.0 12.0 69 58-142 117-185 (395)
61 PRK09952 shikimate transporter 98.0 0.00019 4.1E-09 72.8 16.6 197 48-326 136-332 (438)
62 TIGR00897 2A0118 polyol permea 98.0 0.00057 1.2E-08 68.2 19.5 69 229-313 222-290 (402)
63 TIGR01299 synapt_SV2 synaptic 98.0 0.0002 4.3E-09 77.8 16.6 94 48-144 266-359 (742)
64 PRK11273 glpT sn-glycerol-3-ph 98.0 0.00054 1.2E-08 69.6 18.9 178 54-307 137-316 (452)
65 TIGR00894 2A0114euk Na(+)-depe 98.0 0.00021 4.6E-09 72.6 15.4 153 50-265 144-296 (465)
66 TIGR02332 HpaX 4-hydroxyphenyl 97.9 0.00067 1.5E-08 68.2 18.6 207 54-322 113-322 (412)
67 PRK11652 emrD multidrug resist 97.9 0.00095 2.1E-08 66.0 19.2 72 56-142 115-186 (394)
68 TIGR00903 2A0129 major facilit 97.9 0.00047 1E-08 68.6 16.7 124 57-258 98-221 (368)
69 PRK10406 alpha-ketoglutarate t 97.9 0.00089 1.9E-08 67.5 18.8 76 50-132 137-212 (432)
70 PRK15075 citrate-proton sympor 97.9 0.0005 1.1E-08 69.4 16.9 40 56-95 136-175 (434)
71 PRK11043 putative transporter; 97.9 0.00092 2E-08 66.3 18.5 72 55-142 112-183 (401)
72 TIGR00882 2A0105 oligosacchari 97.9 0.00041 9E-09 68.8 15.7 89 229-329 215-303 (396)
73 PRK03699 putative transporter; 97.9 0.00058 1.3E-08 67.9 16.2 84 229-327 205-288 (394)
74 PRK09705 cynX putative cyanate 97.8 0.00076 1.7E-08 67.2 16.0 85 230-330 206-290 (393)
75 TIGR00887 2A0109 phosphate:H+ 97.8 0.00085 1.8E-08 69.2 16.7 95 48-144 126-229 (502)
76 TIGR00885 fucP L-fucose:H+ sym 97.8 0.0015 3.3E-08 65.8 17.5 47 49-95 106-152 (410)
77 TIGR00896 CynX cyanate transpo 97.8 0.0016 3.4E-08 63.5 17.1 86 229-330 197-283 (355)
78 PRK09556 uhpT sugar phosphate 97.8 0.0005 1.1E-08 70.2 14.1 80 229-323 258-337 (467)
79 TIGR00805 oat sodium-independe 97.6 0.0012 2.7E-08 70.5 15.7 59 37-95 172-230 (633)
80 PRK09528 lacY galactoside perm 97.6 0.00082 1.8E-08 67.3 13.0 46 286-331 268-313 (420)
81 PRK03633 putative MFS family t 97.6 0.006 1.3E-07 60.3 18.6 47 49-95 106-152 (381)
82 TIGR00788 fbt folate/biopterin 97.6 0.00086 1.9E-08 68.9 12.8 206 45-328 128-336 (468)
83 KOG2615 Permease of the major 97.6 0.00061 1.3E-08 67.9 11.0 43 53-95 136-178 (451)
84 TIGR02718 sider_RhtX_FptX side 97.6 0.0035 7.6E-08 62.0 16.5 77 230-322 209-286 (390)
85 PRK03893 putative sialic acid 97.6 0.0051 1.1E-07 62.7 18.1 47 49-95 120-166 (496)
86 PLN00028 nitrate transmembrane 97.5 0.0035 7.5E-08 64.4 16.3 78 56-139 142-219 (476)
87 KOG0569 Permease of the major 97.5 0.0015 3.2E-08 67.6 12.8 228 46-331 125-356 (485)
88 COG2270 Permeases of the major 97.4 0.0017 3.6E-08 65.5 12.1 210 43-331 121-339 (438)
89 KOG2532 Permease of the major 97.3 0.0038 8.3E-08 64.4 13.6 202 56-331 147-354 (466)
90 KOG2816 Predicted transporter 97.2 0.011 2.4E-07 60.9 15.7 78 54-146 129-206 (463)
91 PRK10054 putative transporter; 97.2 0.0023 4.9E-08 64.0 10.3 91 226-331 4-94 (395)
92 TIGR00892 2A0113 monocarboxyla 97.1 0.016 3.4E-07 59.2 15.2 71 54-140 125-195 (455)
93 TIGR00889 2A0110 nucleoside tr 97.0 0.024 5.3E-07 57.2 15.4 96 225-329 205-300 (418)
94 PRK15034 nitrate/nitrite trans 96.9 0.047 1E-06 56.3 17.3 186 55-328 145-334 (462)
95 KOG0254 Predicted transporter 96.9 0.022 4.7E-07 59.2 14.9 227 47-331 152-380 (513)
96 KOG1330 Sugar transporter/spin 96.9 0.0039 8.5E-08 63.6 8.7 76 54-143 138-213 (493)
97 PF06609 TRI12: Fungal trichot 96.6 0.087 1.9E-06 56.0 16.8 114 227-368 308-422 (599)
98 KOG0255 Synaptic vesicle trans 96.6 0.094 2E-06 54.2 16.7 47 48-95 182-228 (521)
99 PF03092 BT1: BT1 family; Int 96.4 0.048 1E-06 55.6 12.8 82 46-142 95-178 (433)
100 TIGR00880 2_A_01_02 Multidrug 96.2 0.012 2.7E-07 47.8 6.2 82 45-141 59-140 (141)
101 COG2223 NarK Nitrate/nitrite t 96.2 0.086 1.9E-06 53.3 12.8 182 56-330 123-304 (417)
102 PRK11646 multidrug resistance 96.1 0.037 8.1E-07 55.3 10.3 91 224-331 7-97 (400)
103 PF00083 Sugar_tr: Sugar (and 96.0 8.5E-05 1.8E-09 74.8 -9.5 85 48-145 113-197 (451)
104 KOG2325 Predicted transporter/ 96.0 0.089 1.9E-06 54.5 12.4 84 53-144 145-234 (488)
105 PRK03633 putative MFS family t 95.8 0.044 9.5E-07 54.1 9.2 90 226-331 3-92 (381)
106 PRK10091 MFS transport protein 95.5 0.12 2.5E-06 51.2 10.8 89 227-331 1-89 (382)
107 KOG0637 Sucrose transporter an 95.4 0.01 2.2E-07 60.5 2.8 118 19-149 87-238 (498)
108 TIGR00924 yjdL_sub1_fam amino 95.4 0.41 8.9E-06 49.3 14.5 71 49-134 114-187 (475)
109 TIGR01299 synapt_SV2 synaptic 95.3 0.023 4.9E-07 62.0 5.3 79 47-142 658-736 (742)
110 KOG3626 Organic anion transpor 95.3 0.13 2.8E-06 55.7 10.7 61 35-95 235-295 (735)
111 PRK09584 tppB putative tripept 95.3 0.46 1E-05 49.3 14.7 66 54-134 129-196 (500)
112 PRK10207 dipeptide/tripeptide 95.0 0.79 1.7E-05 47.5 15.3 66 54-134 122-189 (489)
113 TIGR00924 yjdL_sub1_fam amino 94.9 0.21 4.5E-06 51.4 10.7 92 225-330 6-99 (475)
114 COG2271 UhpC Sugar phosphate p 94.9 0.69 1.5E-05 47.1 13.9 146 56-258 136-281 (448)
115 PF03137 OATP: Organic Anion T 94.8 0.0073 1.6E-07 63.5 -0.1 63 33-95 137-199 (539)
116 cd06174 MFS The Major Facilita 94.7 0.26 5.7E-06 46.5 10.4 84 232-331 2-85 (352)
117 KOG2533 Permease of the major 94.6 0.67 1.4E-05 48.3 13.8 148 57-258 154-302 (495)
118 PRK09874 drug efflux system pr 94.2 0.65 1.4E-05 45.6 12.2 91 230-331 15-105 (408)
119 PRK09584 tppB putative tripept 94.2 0.51 1.1E-05 48.9 11.9 90 226-330 18-108 (500)
120 PF01306 LacY_symp: LacY proto 94.2 1.9 4.2E-05 43.9 15.6 38 294-331 273-310 (412)
121 TIGR00882 2A0105 oligosacchari 94.1 0.32 6.9E-06 48.1 9.7 82 229-325 2-83 (396)
122 TIGR00900 2A0121 H+ Antiporter 94.1 0.28 6E-06 46.9 9.0 84 232-331 2-85 (365)
123 PRK10207 dipeptide/tripeptide 94.1 0.41 8.9E-06 49.6 10.8 90 226-330 11-101 (489)
124 PRK10504 putative transporter; 94.0 0.43 9.2E-06 48.3 10.7 85 230-330 11-95 (471)
125 TIGR00891 2A0112 putative sial 94.0 0.54 1.2E-05 45.7 11.0 86 230-331 13-98 (405)
126 TIGR00886 2A0108 nitrite extru 93.8 0.32 7E-06 46.9 8.9 86 231-331 3-88 (366)
127 PRK11195 lysophospholipid tran 93.7 0.55 1.2E-05 46.8 10.7 87 227-329 1-87 (393)
128 TIGR00897 2A0118 polyol permea 93.6 0.68 1.5E-05 46.0 11.1 86 226-327 10-95 (402)
129 COG0738 FucP Fucose permease [ 93.5 5.6 0.00012 40.4 17.1 53 43-95 110-162 (422)
130 PF07690 MFS_1: Major Facilita 93.3 0.63 1.4E-05 44.2 10.0 81 234-329 1-81 (352)
131 PRK15403 multidrug efflux syst 93.1 0.49 1.1E-05 47.6 9.2 49 283-331 54-102 (413)
132 PRK11663 regulatory protein Uh 93.1 0.73 1.6E-05 46.4 10.4 48 284-331 62-109 (434)
133 TIGR00895 2A0115 benzoate tran 92.9 1.4 3E-05 42.6 11.8 46 286-331 58-103 (398)
134 PRK03893 putative sialic acid 92.9 0.98 2.1E-05 45.9 11.1 48 284-331 59-106 (496)
135 PRK10489 enterobactin exporter 92.5 0.3 6.4E-06 48.7 6.6 39 57-95 332-370 (417)
136 TIGR00889 2A0110 nucleoside tr 92.4 0.84 1.8E-05 46.0 9.8 87 230-331 3-90 (418)
137 TIGR00769 AAA ADP/ATP carrier 92.2 5.7 0.00012 41.2 15.7 48 46-93 137-185 (472)
138 PRK11043 putative transporter; 91.9 1.7 3.8E-05 42.8 11.2 86 231-331 5-92 (401)
139 PRK03699 putative transporter; 91.8 1.4 3.1E-05 43.6 10.5 46 286-331 48-93 (394)
140 KOG2563 Permease of the major 91.8 9.7 0.00021 39.3 16.3 74 66-146 169-242 (480)
141 TIGR00881 2A0104 phosphoglycer 91.7 0.76 1.6E-05 44.0 8.2 48 284-331 34-81 (379)
142 PRK15402 multidrug efflux syst 91.7 1.2 2.7E-05 44.0 10.0 49 283-331 51-99 (406)
143 PRK11652 emrD multidrug resist 91.4 1.7 3.7E-05 42.8 10.5 48 284-331 47-94 (394)
144 TIGR00710 efflux_Bcr_CflA drug 91.1 2 4.4E-05 41.5 10.6 48 284-331 44-91 (385)
145 TIGR00711 efflux_EmrB drug res 91.1 1.7 3.6E-05 43.9 10.3 48 284-331 41-88 (485)
146 PRK11273 glpT sn-glycerol-3-ph 91.0 1.7 3.7E-05 44.1 10.3 48 284-331 67-114 (452)
147 PLN00028 nitrate transmembrane 91.0 1.8 3.9E-05 44.4 10.6 46 286-331 77-122 (476)
148 PRK12307 putative sialic acid 91.0 2.4 5.2E-05 42.1 11.2 48 284-331 57-104 (426)
149 PRK09705 cynX putative cyanate 90.7 1.1 2.4E-05 44.4 8.6 50 282-331 46-95 (393)
150 TIGR00890 2A0111 Oxalate/Forma 90.5 0.84 1.8E-05 43.7 7.2 48 284-331 42-89 (377)
151 PRK15462 dipeptide/tripeptide 90.3 1.5 3.3E-05 45.6 9.4 86 227-327 7-93 (493)
152 PRK05122 major facilitator sup 90.2 0.68 1.5E-05 45.6 6.4 74 50-138 315-388 (399)
153 PF03825 Nuc_H_symport: Nucleo 89.8 0.49 1.1E-05 47.8 5.1 78 56-142 320-398 (400)
154 PRK11551 putative 3-hydroxyphe 89.5 3.1 6.8E-05 40.9 10.6 48 284-331 54-101 (406)
155 TIGR00788 fbt folate/biopterin 89.4 0.45 9.7E-06 48.9 4.6 43 53-95 367-409 (468)
156 TIGR00880 2_A_01_02 Multidrug 89.0 1.4 2.9E-05 35.5 6.4 43 288-330 6-48 (141)
157 TIGR00893 2A0114 d-galactonate 89.0 1.1 2.4E-05 42.9 6.7 69 52-134 326-394 (399)
158 PRK09952 shikimate transporter 88.8 3.9 8.5E-05 41.3 10.8 91 232-331 25-115 (438)
159 PF01770 Folate_carrier: Reduc 88.6 15 0.00032 37.5 14.7 71 54-137 110-180 (412)
160 PRK03545 putative arabinose tr 88.6 1.4 3.1E-05 43.4 7.4 48 284-331 48-95 (390)
161 PRK09528 lacY galactoside perm 88.6 2.5 5.5E-05 42.1 9.3 81 229-324 10-90 (420)
162 PRK09556 uhpT sugar phosphate 88.1 3.2 6.9E-05 42.3 9.7 47 284-330 68-114 (467)
163 TIGR00898 2A0119 cation transp 87.7 1.9 4.2E-05 44.0 7.9 49 283-331 130-178 (505)
164 TIGR02332 HpaX 4-hydroxyphenyl 87.3 5.3 0.00011 40.0 10.7 48 284-331 47-94 (412)
165 PRK12382 putative transporter; 87.0 1.2 2.7E-05 43.7 5.8 74 50-138 315-388 (392)
166 TIGR00892 2A0113 monocarboxyla 86.9 4.3 9.3E-05 41.3 9.9 46 286-331 60-105 (455)
167 KOG3764 Vesicular amine transp 86.8 1.7 3.7E-05 44.1 6.5 73 53-140 175-248 (464)
168 TIGR00806 rfc RFC reduced fola 86.8 8.5 0.00018 40.2 11.8 69 57-138 134-202 (511)
169 PRK10213 nepI ribonucleoside t 86.4 2.9 6.2E-05 41.6 8.1 48 284-331 59-106 (394)
170 TIGR00885 fucP L-fucose:H+ sym 86.3 3.3 7.2E-05 41.6 8.6 46 284-329 42-87 (410)
171 PRK15075 citrate-proton sympor 86.3 8.6 0.00019 38.6 11.6 90 231-331 17-107 (434)
172 PF05978 UNC-93: Ion channel r 85.5 4.9 0.00011 35.3 8.2 46 281-326 38-83 (156)
173 TIGR00883 2A0106 metabolite-pr 85.4 4.5 9.8E-05 38.8 8.8 38 294-331 49-86 (394)
174 PRK10473 multidrug efflux syst 85.4 8.5 0.00018 37.7 10.9 48 284-331 42-89 (392)
175 TIGR00899 2A0120 sugar efflux 84.8 7.3 0.00016 37.5 10.0 79 236-329 4-83 (375)
176 PF05977 MFS_3: Transmembrane 84.7 3.1 6.8E-05 43.7 7.7 79 43-136 313-391 (524)
177 PRK08633 2-acyl-glycerophospho 84.6 4.3 9.3E-05 46.0 9.3 88 229-329 9-96 (1146)
178 TIGR00879 SP MFS transporter, 84.4 1.8 3.9E-05 42.7 5.6 69 58-142 404-473 (481)
179 PRK10642 proline/glycine betai 83.9 12 0.00027 38.3 11.7 41 291-331 68-108 (490)
180 PRK10133 L-fucose transporter; 83.7 4.2 9.1E-05 41.3 8.0 44 284-327 65-108 (438)
181 PRK15034 nitrate/nitrite trans 82.6 12 0.00026 38.8 10.8 45 286-330 76-120 (462)
182 PF05631 DUF791: Protein of un 81.6 60 0.0013 32.5 16.3 41 216-257 232-272 (354)
183 PRK14995 methyl viologen resis 80.8 6 0.00013 40.7 7.9 49 283-331 44-92 (495)
184 PRK10077 xylE D-xylose transpo 80.5 8.7 0.00019 38.7 8.9 46 284-329 59-104 (479)
185 PF03825 Nuc_H_symport: Nucleo 80.4 13 0.00028 37.6 10.0 84 232-331 5-89 (400)
186 PRK11102 bicyclomycin/multidru 80.2 5.8 0.00013 38.4 7.3 47 285-331 31-77 (377)
187 PRK15011 sugar efflux transpor 79.9 16 0.00036 36.0 10.5 89 227-330 13-102 (393)
188 TIGR00896 CynX cyanate transpo 79.2 10 0.00022 36.6 8.6 45 283-327 38-82 (355)
189 KOG0255 Synaptic vesicle trans 78.8 6.6 0.00014 40.5 7.5 60 272-331 110-169 (521)
190 KOG3574 Acetyl-CoA transporter 77.0 71 0.0015 32.8 13.6 57 35-95 131-187 (510)
191 TIGR00926 2A1704 Peptide:H+ sy 76.9 1.2E+02 0.0025 33.0 16.5 92 37-136 85-179 (654)
192 KOG4686 Predicted sugar transp 76.6 6.6 0.00014 38.6 6.1 92 225-331 260-351 (459)
193 PF06645 SPC12: Microsomal sig 74.7 7.5 0.00016 30.0 4.9 55 69-144 4-58 (76)
194 PF13000 Acatn: Acetyl-coenzym 74.6 66 0.0014 33.9 13.1 71 216-307 263-336 (544)
195 TIGR00712 glpT glycerol-3-phos 74.6 11 0.00025 37.8 7.8 47 284-330 65-111 (438)
196 PRK10406 alpha-ketoglutarate t 74.2 23 0.00051 35.4 9.9 39 293-331 76-114 (432)
197 KOG4112 Signal peptidase subun 74.0 7.9 0.00017 31.0 4.9 64 53-135 4-67 (101)
198 PF11700 ATG22: Vacuole efflux 73.4 6.4 0.00014 40.8 5.6 78 49-142 392-470 (477)
199 PRK06814 acylglycerophosphoeth 73.0 4.1 8.8E-05 46.4 4.5 49 47-95 344-392 (1140)
200 KOG0254 Predicted transporter 72.6 17 0.00038 37.5 8.7 48 284-331 93-140 (513)
201 KOG2504 Monocarboxylate transp 70.4 20 0.00043 37.6 8.5 44 288-331 89-132 (509)
202 TIGR00887 2A0109 phosphate:H+ 69.8 16 0.00034 37.5 7.7 47 284-330 60-106 (502)
203 KOG0253 Synaptic vesicle trans 66.5 62 0.0014 33.1 10.5 34 298-331 399-432 (528)
204 PRK11010 ampG muropeptide tran 66.0 20 0.00043 37.0 7.5 37 295-331 60-102 (491)
205 TIGR00903 2A0129 major facilit 64.8 30 0.00066 34.2 8.2 39 286-324 32-70 (368)
206 TIGR02718 sider_RhtX_FptX side 64.4 14 0.00031 36.2 5.9 66 54-134 320-386 (390)
207 TIGR00894 2A0114euk Na(+)-depe 62.9 83 0.0018 31.6 11.2 44 286-329 82-125 (465)
208 KOG3762 Predicted transporter 60.1 13 0.00028 39.3 4.7 82 50-142 472-554 (618)
209 PRK09848 glucuronide transport 59.7 9.5 0.00021 38.4 3.6 48 48-95 330-384 (448)
210 KOG2504 Monocarboxylate transp 59.6 1.3E+02 0.0028 31.5 12.1 87 229-331 298-386 (509)
211 TIGR00792 gph sugar (Glycoside 58.5 19 0.00041 35.6 5.6 47 49-95 323-376 (437)
212 PF03092 BT1: BT1 family; Int 58.5 14 0.0003 37.6 4.6 88 48-142 329-416 (433)
213 TIGR01301 GPH_sucrose GPH fami 58.1 38 0.00081 35.2 7.8 86 230-331 5-95 (477)
214 KOG1330 Sugar transporter/spin 57.7 17 0.00037 37.7 5.0 62 287-368 75-136 (493)
215 PF00854 PTR2: POT family; In 56.7 36 0.00078 33.5 7.2 90 34-138 30-122 (372)
216 PRK15462 dipeptide/tripeptide 52.5 29 0.00063 36.2 5.9 66 57-137 120-187 (493)
217 KOG2601 Iron transporter [Inor 50.3 16 0.00034 37.2 3.2 57 40-103 396-452 (503)
218 KOG0569 Permease of the major 50.0 52 0.0011 34.3 7.2 47 285-331 65-111 (485)
219 TIGR00901 2A0125 AmpG-related 49.7 58 0.0013 31.2 7.2 39 293-331 38-78 (356)
220 COG2270 Permeases of the major 49.4 33 0.0007 35.2 5.4 81 47-142 351-431 (438)
221 COG2814 AraJ Arabinose efflux 49.2 70 0.0015 32.5 7.8 48 284-331 52-99 (394)
222 TIGR00902 2A0127 phenyl propri 49.2 1.3E+02 0.0028 29.3 9.8 24 286-309 45-68 (382)
223 PF03219 TLC: TLC ATP/ADP tran 48.8 3.4E+02 0.0074 28.4 15.2 36 58-93 165-200 (491)
224 COG2807 CynX Cyanate permease 48.0 1.7E+02 0.0038 29.6 10.1 47 285-331 248-295 (395)
225 PF06609 TRI12: Fungal trichot 46.7 1.4E+02 0.003 32.2 9.9 45 287-331 85-129 (599)
226 PTZ00207 hypothetical protein; 44.5 1.4E+02 0.003 32.0 9.6 35 296-330 77-111 (591)
227 PRK09669 putative symporter Ya 40.8 41 0.00089 33.8 4.8 44 52-95 334-384 (444)
228 PF01306 LacY_symp: LacY proto 39.1 1.1E+02 0.0025 31.2 7.6 76 229-319 7-84 (412)
229 PRK11902 ampG muropeptide tran 37.3 1.3E+02 0.0029 29.5 7.7 56 276-331 28-89 (402)
230 PTZ00207 hypothetical protein; 36.5 79 0.0017 33.9 6.2 33 56-89 139-171 (591)
231 COG2223 NarK Nitrate/nitrite t 35.4 3.4E+02 0.0074 27.8 10.2 78 235-331 23-100 (417)
232 TIGR00939 2a57 Equilibrative N 34.7 1.8E+02 0.004 29.7 8.4 69 287-368 52-121 (437)
233 PRK11128 putative 3-phenylprop 33.3 2.5E+02 0.0055 27.3 9.0 66 228-309 3-68 (382)
234 KOG3098 Uncharacterized conser 33.1 5.8E+02 0.013 26.5 16.1 43 48-90 113-155 (461)
235 TIGR00806 rfc RFC reduced fola 32.6 1.8E+02 0.0038 30.7 7.8 43 289-331 71-113 (511)
236 PF13630 SdpI: SdpI/YhfL prote 31.8 2.1E+02 0.0046 21.1 7.6 35 271-305 19-53 (76)
237 PF12832 MFS_1_like: MFS_1 lik 29.8 2.5E+02 0.0054 21.3 7.6 68 233-317 4-72 (77)
238 PF11947 DUF3464: Protein of u 27.3 1.3E+02 0.0028 26.4 5.0 17 311-327 98-114 (153)
239 KOG3764 Vesicular amine transp 26.9 1.2E+02 0.0025 31.4 5.1 54 276-330 103-156 (464)
240 PF06570 DUF1129: Protein of u 24.6 5.3E+02 0.011 23.3 10.1 28 230-257 77-104 (206)
241 PF10997 DUF2837: Protein of u 24.3 1.7E+02 0.0037 27.9 5.5 63 33-95 23-86 (254)
242 KOG2615 Permease of the major 23.7 3.7E+02 0.0079 27.7 8.0 71 245-326 44-114 (451)
243 PF11628 TCR_zetazeta: T-cell 23.4 34 0.00075 22.0 0.5 25 118-142 3-27 (33)
244 PRK10429 melibiose:sodium symp 22.1 2E+02 0.0042 29.3 6.0 45 51-95 338-389 (473)
245 KOG2563 Permease of the major 21.7 1.8E+02 0.0039 30.2 5.5 71 234-324 53-123 (480)
246 COG2807 CynX Cyanate permease 20.9 1.5E+02 0.0033 30.0 4.7 33 293-325 60-92 (395)
247 KOG4812 Golgi-associated prote 20.8 2.6E+02 0.0057 26.5 5.9 29 230-258 163-191 (262)
No 1
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=100.00 E-value=3.2e-58 Score=469.13 Aligned_cols=309 Identities=43% Similarity=0.827 Sum_probs=266.7
Q ss_pred eeehhHhhchHHHhhhccCCcccccccCCCcchhHHHHHHHHHHHhhcccccchhhHHHHhcCCCchhh--hhHHHHHHH
Q 017498 3 SVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQR--NSANAIFCS 80 (370)
Q Consensus 3 ~isl~ll~~s~~iG~~lgd~s~~~~~~~g~r~~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq--~~a~a~~s~ 80 (370)
++++++++++++++..++|..+ .+.+.+++++++++++++|++.|++|+|+||+++|++|++|| +.|++|+++
T Consensus 85 ~~~l~ll~~~~~~~~~~~~~~~-----~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~ 159 (477)
T TIGR01301 85 AFAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSF 159 (477)
T ss_pred HHHHHHHHhCchhhhhcccccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHH
Confidence 4578899999999998887544 234678899999999999999999999999999999999876 489999999
Q ss_pred HHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCC
Q 017498 81 WMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLD 160 (370)
Q Consensus 81 ~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~ 160 (370)
+.++|+++||++|++++|.+++|+.+++.++.+|.++|.+|+++++++++|+++|++++||+|+.++++.+.+
T Consensus 160 ~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~------- 232 (477)
T TIGR01301 160 FMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS------- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh-------
Confidence 9999999999999985567788988888899999999999999999999999999999999987443211000
Q ss_pred CcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHH
Q 017498 161 DPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL 240 (370)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqff 240 (370)
+.+ +..+.+..+.++++++++++|||+||++|++|||
T Consensus 233 ------------------------------------------~~~-~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqff 269 (477)
T TIGR01301 233 ------------------------------------------EAA-PPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCL 269 (477)
T ss_pred ------------------------------------------hcc-cccccchhhhHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 000 0000112356899999999999999999999999
Q ss_pred HHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-chHHHHHHHHH
Q 017498 241 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAISNFI 319 (370)
Q Consensus 241 sW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig-~r~v~~~s~~i 319 (370)
+|+|||||++|+||||||+||+++|++ .+.|+||||+|+||+++|++++.++|+++|+++|++| +|++|.+||++
T Consensus 270 sW~a~f~~~~y~T~~vg~~v~~~~~~~----~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~ 345 (477)
T TIGR01301 270 NWIAWFPFILFDTDWMGREVYGGSVNQ----GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNII 345 (477)
T ss_pred HHHHHHHHHHhccHHHHHHHcCCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 999999999999999999999998753 3689999999999999999999999999999999998 59999999999
Q ss_pred HHHHHHHHHHHhhccccc-cCCCcccCCCCchhHHHHHHHHHHHhccccccC
Q 017498 320 VFACMATTAIISVISVRE-YSGGIEHGIGANQAIKVASLVVFTLLGFPLARS 370 (370)
Q Consensus 320 ~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~l~~~~G~~~a~~ 370 (370)
+++||+++++++.++++. +.++.++.++|+.++|+.++++++++||+||++
T Consensus 346 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~ 397 (477)
T TIGR01301 346 LAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAIT 397 (477)
T ss_pred HHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHH
Confidence 999999999998655532 345667788899999999999999999999974
No 2
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-57 Score=450.21 Aligned_cols=308 Identities=39% Similarity=0.741 Sum_probs=265.4
Q ss_pred CeeeehhHhhchHHHhhhccCCcccccccCCCcchhHHHHHHHHHHHhhcccccchhhHHHHhcCCCchhhhh-HHHHHH
Q 017498 1 MISVAVIIIGFSADIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNS-ANAIFC 79 (370)
Q Consensus 1 ~i~isl~ll~~s~~iG~~lgd~s~~~~~~~g~r~~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~-a~a~~s 79 (370)
+|++++++++|++|||..+||..+++ .|+++|+++++|+|++|+++|++|+|+|||+.|++.++||.+ ||++++
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~-----~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKP-----VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccc-----cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 36789999999999999999987732 468999999999999999999999999999999999888887 999999
Q ss_pred HHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCC
Q 017498 80 SWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLL 159 (370)
Q Consensus 80 ~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l 159 (370)
+|+++||++||++|++.+|++.++|+.++.|+..|.++|..|+..+.+..++....+...+|+|..+.+....
T Consensus 186 ~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~------- 258 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTAR------- 258 (498)
T ss_pred HHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCccccc-------
Confidence 9999999999999988899999999999999999999999999999999999888888888877655421000
Q ss_pred CCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHH
Q 017498 160 DDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMA 239 (370)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqf 239 (370)
.+. + ....+-|++.++++||++||++|++++
T Consensus 259 ------------------------------------------~~~--~-----~~~~~~e~fG~~~~mpr~m~~L~i~~l 289 (498)
T KOG0637|consen 259 ------------------------------------------SKS--S-----KLPFLLEIFGALKVMPRPMRMLLIVTL 289 (498)
T ss_pred ------------------------------------------ccc--c-----CcchHHHHhchHhhCChhHHHHHHHHH
Confidence 000 0 012355888899999999999999999
Q ss_pred HHHHHhhhhhhhccccccceeecCCCCCC--chhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-chHHHHHH
Q 017498 240 LTWLSWFPFFLFDTDWMGREVYHGDPKGN--DHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SRLVWAIS 316 (370)
Q Consensus 240 fsW~g~f~f~~y~T~~vge~vf~gdp~a~--s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig-~r~v~~~s 316 (370)
++|+|||+|++|+||||||+||+|||+++ |++.+.||+|||+|||||++|++++.++|+.++++.+|+| +|+.|..+
T Consensus 290 ltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~ 369 (498)
T KOG0637|consen 290 LTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGV 369 (498)
T ss_pred HHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehh
Confidence 99999999999999999999999999986 4889999999999999999999999999999999999999 67777777
Q ss_pred H-HHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhccccccC
Q 017498 317 N-FIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLARS 370 (370)
Q Consensus 317 ~-~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~~~a~~ 370 (370)
+ +..++|+..+....+++.+...... --..|...+++.++.+|+++|+|||+|
T Consensus 370 ~~f~~~~~~~gl~~~~~~~~~~~~~~G-~~~~~~~~~p~~l~~~y~~~g~~~a~t 423 (498)
T KOG0637|consen 370 NAFGLATGLAGLVLNTYVVLSHRSTAG-ILSSPLLTVPYGALALYAILGIPLAIT 423 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhcc-eeecchhcccHHHHHHHHHhCCccccc
Confidence 7 7888888887766666555443221 122467788999999999999999986
No 3
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.70 E-value=1.4e-16 Score=160.32 Aligned_cols=246 Identities=19% Similarity=0.236 Sum_probs=176.7
Q ss_pred ccCCcccccccCCCcchhHHHH----------------------------HHHHHHHhhcccccchhhHHHHhcCCCc-h
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVF----------------------------VIGFWLLDLANNTVQGPARALLADLSGP-D 69 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~----------------------------v~gv~llD~s~n~~q~P~RAli~D~~p~-~ 69 (370)
+|..+|++++|+||||+.++++ .+...++|++.+.++.|.+|++.|++++ +
T Consensus 57 ~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~ 136 (428)
T PF13347_consen 57 IGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD 136 (428)
T ss_pred EEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh
Confidence 5778999999999998887655 2334467999999999999999999985 8
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCC
Q 017498 70 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQP 149 (370)
Q Consensus 70 qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~ 149 (370)
||.+..++.+.+..+|+++.+.+... -++ . +++.. ....++..+.+.+++.+++..++++.+||++-+..+
T Consensus 137 ~R~~l~~~~~~~~~~g~~l~~~~~~~-l~~-~---~g~~~---~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~- 207 (428)
T PF13347_consen 137 ERTRLSSWRMIFSMIGSLLASFLAPI-LVS-W---FGGGD---TSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTE- 207 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhh-hhh-h---hccCc---cchHHHHHHHHHHHHHHHHhhhhhheeeeccccccc-
Confidence 99999999999999999766666544 121 1 11110 012588999999999999999999999992111100
Q ss_pred CCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCH
Q 017498 150 NHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPP 229 (370)
Q Consensus 150 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~ 229 (370)
++....+++.++++++- |
T Consensus 208 -------------------------------------------------------------~~~~~~~~~~~~~~~~n-r 225 (428)
T PF13347_consen 208 -------------------------------------------------------------QEKKISLRDSLRSLFRN-R 225 (428)
T ss_pred -------------------------------------------------------------cccccccccchhhhccc-c
Confidence 00012345556666654 5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~ 309 (370)
++++++..+++.|+++.....+..-|... +.+. ++ .. +.-+.++.+.+.+.+.+.+++.||+|+
T Consensus 226 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~-vl~~-~~-------------~~-~~~~~~~~~~~~v~~~~~~~l~~r~gk 289 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFALMNTFLPYYFTY-VLGN-EG-------------LI-SIFMLIFFVASIVGSPLWGRLSKRFGK 289 (428)
T ss_pred hHHHHHHHHHHHHhhhhhhhhHHHHHHHH-HhcC-ch-------------hh-HHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 68899999999999988655443322222 2221 11 11 222346677888888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhcccccc
Q 017498 310 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAR 369 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~~~a~ 369 (370)
|++|..+.++.+++++.+.++.. ++.+..+++..+.|++++.
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~i~~~l~gi~~~~ 331 (428)
T PF13347_consen 290 KKVYIIGLLLAALGFLLLFFLGP------------------GSPWLVLILFILAGIGYGA 331 (428)
T ss_pred eeehhhhHHHHHHHHHHHHHHHh------------------hhHHHHHHHHHHhHhhhcc
Confidence 99999999999999999888861 2567777777788877653
No 4
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.45 E-value=8.2e-12 Score=127.76 Aligned_cols=228 Identities=13% Similarity=0.113 Sum_probs=148.4
Q ss_pred ccCCcccccccCCCcchhHHHHH----HH----------------------HHHHhhcccccchhhHHHHhcCC-Cchhh
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVFV----IG----------------------FWLLDLANNTVQGPARALLADLS-GPDQR 71 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~v----~g----------------------v~llD~s~n~~q~P~RAli~D~~-p~~qq 71 (370)
+|..+|++++|+||||+.++++. ++ ..+.+++-...+.|..|++.|++ +++||
T Consensus 62 ~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR 141 (473)
T PRK10429 62 MGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRER 141 (473)
T ss_pred heeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHH
Confidence 57889999999999887665441 11 11234555567889999999999 57999
Q ss_pred hhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 017498 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (370)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~ 151 (370)
.+.+++...+..+|+.++..++... . ..++.. +. ....+....+.+++.+++..++++.+||++.++.++.
T Consensus 142 ~~l~~~~~~~~~ig~~~~~~~~~~~-~-~~~g~~-~~-----~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~~- 212 (473)
T PRK10429 142 EQLVPYPRFFASLAGFVTAGFTLPF-V-NYVGGG-DR-----GFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQVS- 212 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-H-HHhCCC-ch-----hhhHHHHHHHHHHHHHHHHHHHHcCceecCCcccccc-
Confidence 9999998888888877775543210 0 111100 00 1135667777777778888888888899742211100
Q ss_pred CCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 017498 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (370)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~ 231 (370)
++ + .+..+++.++.+++- |++
T Consensus 213 ---------------------------------------------------~~--~-----~~~~~~~~~~~~~~n-~~~ 233 (473)
T PRK10429 213 ---------------------------------------------------AE--G-----SHLTLKDIVALIYKN-DQL 233 (473)
T ss_pred ---------------------------------------------------cc--c-----cCCCHHHHHHHHhcC-HHH
Confidence 00 0 012367777777555 889
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
+.++...++.+++...+..+...|+.. + .++++ .. .+-+.+.+++..+..++.+++.+|+|+|+
T Consensus 234 ~~ll~~~~~~~~~~~~~~~~~~y~~~y-~-~~~~~-------------~~-~~~~~~~~i~~ii~~~~~~~l~~r~gkk~ 297 (473)
T PRK10429 234 SCLLGMALAYNIASNIINGFAIYYFTY-V-IGDAD-------------LF-PYYLSYAGAANLVTLILFPRLVKSLSRRI 297 (473)
T ss_pred HHHHHHHHHHHHHHHHHhhheeeEEEE-E-CCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 999999999998887766665544332 2 22321 11 23334455667777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017498 312 VWAISNFIVFACMATTAII 330 (370)
Q Consensus 312 v~~~s~~i~a~~~~~~~~~ 330 (370)
++.++.++..++.+.+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~ 316 (473)
T PRK10429 298 LWAGASIFPVLSCGVLLLM 316 (473)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999988777666655443
No 5
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.44 E-value=7.9e-12 Score=125.08 Aligned_cols=226 Identities=12% Similarity=0.069 Sum_probs=146.7
Q ss_pred ccCCcccccccCCCcchhHHHHH----HHHH----------------------HHhhcccccchhhHHHHhcCCC-chhh
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVFV----IGFW----------------------LLDLANNTVQGPARALLADLSG-PDQR 71 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~v----~gv~----------------------llD~s~n~~q~P~RAli~D~~p-~~qq 71 (370)
.|..+|++++++||||+.++++. ++.+ +++.+....+.|..|+..|+++ ++||
T Consensus 55 ~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R 134 (437)
T TIGR00792 55 MGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRER 134 (437)
T ss_pred heEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHH
Confidence 46779999999999888776542 1111 1233444456799999999984 6899
Q ss_pred hhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 017498 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (370)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~ 151 (370)
++++++...+..+|+.++..+... .-..++-. +. ....+..|.+.+++.+++..++...+||++...++ +
T Consensus 135 ~~~~~~~~~~~~~g~~l~~~~~~~--l~~~~~~~-~~-----~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~--~ 204 (437)
T TIGR00792 135 ESLSTFRRFGATLGGLLVAVIVLP--LVSYFGGG-DD-----KFGWFMFALVLALIGVVSLIICFFGTKERYSEIPK--N 204 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCC-cc-----cccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCc--c
Confidence 999999999999998887765432 10111100 00 12467788888887778877788888986411000 0
Q ss_pred CCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 017498 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (370)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~ 231 (370)
++ + ...+++.++.+.+- |.+
T Consensus 205 ---------------------------------------------------~~--~------~~~~~~~~~~l~~~-~~~ 224 (437)
T TIGR00792 205 ---------------------------------------------------IE--K------KLSLKQIFKALFKN-DQL 224 (437)
T ss_pred ---------------------------------------------------cc--c------CCCHHHHHHHHhCC-HHH
Confidence 00 0 01234445554443 577
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
+.+++..++.|++++.+..+..-|. +.+++ ++. ..+ +-+.++.+...+.+++.+++.+|+|+|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~-------------~~~-~~~~~~~i~~ii~~~~~~~l~~r~g~~~ 288 (437)
T TIGR00792 225 LILCLAYLFYNLAFNIKNGVQVYYF-TYVLG-DPE-------------LFS-YMGSIAIVAGLIGVLLFPRLVKKFGRKI 288 (437)
T ss_pred HHHHHHHHHHHHHHHHHcchhheeE-eeecC-ChH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 8899999999999887655443333 22332 221 112 2234456777788888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017498 312 VWAISNFIVFACMATTAII 330 (370)
Q Consensus 312 v~~~s~~i~a~~~~~~~~~ 330 (370)
++.++.++.+++++.+.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~ 307 (437)
T TIGR00792 289 LFAGGILLMVLGYLIFFFA 307 (437)
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 9999999988888776654
No 6
>PRK09669 putative symporter YagG; Provisional
Probab=99.22 E-value=1.3e-09 Score=110.41 Aligned_cols=220 Identities=12% Similarity=0.084 Sum_probs=131.8
Q ss_pred ccCCcccccccCCCcchhHHHH----HHH----H------------------HHHhhcccccchhhHHHHhcCC-Cchhh
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVF----VIG----F------------------WLLDLANNTVQGPARALLADLS-GPDQR 71 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~----v~g----v------------------~llD~s~n~~q~P~RAli~D~~-p~~qq 71 (370)
+|..+|++++|+||||+.++.+ .+. + .+++.+-.....|..|+..|+. +++||
T Consensus 65 ~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR 144 (444)
T PRK09669 65 MGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRER 144 (444)
T ss_pred eeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHH
Confidence 5778999999999988776433 111 1 1223345567889999999999 55888
Q ss_pred hhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 017498 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (370)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~ 151 (370)
.+.+++......+|+.++..++.. +-..++.- +. ....+..+.+.+++.+++..++++..||++.++.+
T Consensus 145 ~~l~~~r~~~~~~G~~i~~~~~~p--l~~~~~~~-~~-----~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~~~--- 213 (444)
T PRK09669 145 HSLQSWRFALSFIGGLIVSVIALP--LVDILGKG-DE-----QKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPEVD--- 213 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhCCC-ch-----hhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCCCc---
Confidence 999999999999999888765422 11111100 00 11345566666666666666677777886321100
Q ss_pred CCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 017498 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (370)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~ 231 (370)
++ ..+++-++.+.+ .|+.
T Consensus 214 -------------------------------------------------------~~------~~~~~~~~~~~~-n~~~ 231 (444)
T PRK09669 214 -------------------------------------------------------NS------SSVWKDLKLLLG-NSQW 231 (444)
T ss_pred -------------------------------------------------------CC------CCHHHHHHHHhC-CchH
Confidence 00 012222233322 3458
Q ss_pred HHHHHHHHHHHHHhhh---hhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 232 HVVLIVMALTWLSWFP---FFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~---f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.+++..++.+.+... +..|+.+|+ . ++++ .+..-+....+.+.+...+.+++.+|+|
T Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~y~~~~~----~-~~~~--------------~~~~~~~~~~i~~ii~~~~~~~l~~r~g 292 (444)
T PRK09669 232 RIMFIFNVVLLTAVVTRGGATLYYVNYV----L-LRPD--------------LATLFLVTGMIAGLFGALLSERLLGKFD 292 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeeeee----c-CCHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8888899888888743 334433332 2 1221 1122233344555555667789999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+|+.+..+.++.+++.+..++.
T Consensus 293 k~~~~~~~~~~~~~~~~~~~~~ 314 (444)
T PRK09669 293 RVRAFKWTIVAFVILSALIFFI 314 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988777655444444
No 7
>PRK11462 putative transporter; Provisional
Probab=99.21 E-value=1.7e-09 Score=110.56 Aligned_cols=219 Identities=14% Similarity=0.094 Sum_probs=133.4
Q ss_pred ccCCcccccccCCCcchhHHHHH--------------------------HHHHHHhhcccccchhhHHHHhcCCCc-hhh
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVFV--------------------------IGFWLLDLANNTVQGPARALLADLSGP-DQR 71 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~v--------------------------~gv~llD~s~n~~q~P~RAli~D~~p~-~qq 71 (370)
+|..+|++++++||||+.|+++. +...+++.+--....|..|+..+++++ +||
T Consensus 65 ~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eR 144 (460)
T PRK11462 65 MGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQR 144 (460)
T ss_pred heehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHH
Confidence 57889999999999988876551 111233566666788999999999975 899
Q ss_pred hhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 017498 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (370)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~ 151 (370)
.+..++.+....+|+.++..+... +-+.++ +.. -....+....+.+++.+++..+.....||++.++.
T Consensus 145 t~l~s~r~~~~~iG~~~~~~~~~p--lv~~~g---~~~---~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~---- 212 (460)
T PRK11462 145 ISLQSWRFVLATAGGMLSTVLMMP--LVNLIG---GDN---KPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP---- 212 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC---CCc---hhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc----
Confidence 999999999999988887766422 111111 100 01123444455555556666666666788632110
Q ss_pred CCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 017498 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (370)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~ 231 (370)
++ ..+++.+++..+ .|+.
T Consensus 213 -------------------------------------------------------~~------~~~~~~l~~~~~-Nk~~ 230 (460)
T PRK11462 213 -------------------------------------------------------TT------TSMREDLRDIWQ-NDQW 230 (460)
T ss_pred -------------------------------------------------------cC------CCHHHHHHHHhC-ChHH
Confidence 00 013444444433 4567
Q ss_pred HHHHHHHHHHHHHh---hhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 232 HVVLIVMALTWLSW---FPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 232 ~~lc~vqffsW~g~---f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.++...++.+++. .....|+..|+. ++++ ..+.-+..+.+.+.+.+.+-+++.+|++
T Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~y~~~y~~-----g~~~--------------~~~~~l~~~~i~~iig~~l~~~l~~r~g 291 (460)
T PRK11462 231 RIVGLLTIFNILAVCVRGGAMMYYVTWIL-----GTPE--------------VFVAFLTTYCVGNLIGSALAKPLTDWKC 291 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhhhhhhc-----CChH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88877777776663 344455554532 2221 1122355666667777778899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+|+++..+.++.++..+..++.
T Consensus 292 kk~~~~~~~~~~~~~~~~~~~~ 313 (460)
T PRK11462 292 KVTIFWWTNALLAVISLAMFFV 313 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999876655444433333333
No 8
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.20 E-value=1e-09 Score=111.79 Aligned_cols=226 Identities=15% Similarity=0.154 Sum_probs=150.3
Q ss_pred ccCCcccccccCCCcchhHHHHHH--------------------------HHHHHhhcccccchhhHHHHhcCCCc-hhh
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVFVI--------------------------GFWLLDLANNTVQGPARALLADLSGP-DQR 71 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~v~--------------------------gv~llD~s~n~~q~P~RAli~D~~p~-~qq 71 (370)
+|-..|+.++|+||+||.++.+.+ -..+++++-..+..|.-|+..-++++ +||
T Consensus 68 ~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER 147 (467)
T COG2211 68 MGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQER 147 (467)
T ss_pred heeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHH
Confidence 455677888999999888776621 22244556666889999999999966 899
Q ss_pred hhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCC
Q 017498 72 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 151 (370)
Q Consensus 72 ~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~ 151 (370)
.+-++|...+.++|+.+...+-.. +-+.++ .++ -...++..-.+-.++.++...++.+.+||++.+.++.++
T Consensus 148 ~~l~s~R~~~~~~g~~l~~~~~~p--lv~~~g--~~~----~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~ 219 (467)
T COG2211 148 ASLTSWRMVFASLGGLLVAVLFPP--LVKLFG--GGD----KALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHhC--CCc----chhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc
Confidence 999999999999998887655321 111211 010 012344445555566666777777889998653321100
Q ss_pred CCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHHHHhccCCHHH
Q 017498 152 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 231 (370)
Q Consensus 152 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~ 231 (370)
+.+..+++.+..+++ -|++
T Consensus 220 ------------------------------------------------------------~~~~~~~~~~~~~~~-Nrp~ 238 (467)
T COG2211 220 ------------------------------------------------------------GVKLKLKDSFLLIFK-NRPL 238 (467)
T ss_pred ------------------------------------------------------------cccccHHHHHHHHHc-cchH
Confidence 011234444443332 2677
Q ss_pred HHHHHHHHHHHHHhhh---hhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 232 HVVLIVMALTWLSWFP---FFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~---f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.+|+..++.|.+..- +..|+.+|+ -|+++ ....+.+..++....+..++.|++.+|+|
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~-----lg~~~-------------l~~~~~~~~~~~~~l~~~~~~p~L~~~~g 300 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYV-----LGDPE-------------LFAYLLLLASGAGLLIGLILWPRLVKKFG 300 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEE-----cCChH-------------HHHHHHHHHHHHHHHHHHHhHHHHHHHhc
Confidence 8888899999998763 445555443 22332 23345566666666666788999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 017498 309 SRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.|++|.++.++.+++-+.++|..
T Consensus 301 kk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 301 KKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999998888886
No 9
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.08 E-value=4.8e-09 Score=102.34 Aligned_cols=198 Identities=9% Similarity=-0.024 Sum_probs=118.7
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
.......+..|++.|..|+++|.+++++.+....+|.++|..++.. +...++ ... ....-.|..|.+.+++.+
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~--l~~~~g---~~~--~~~~~wr~~f~i~ai~~l 168 (356)
T TIGR00901 96 FSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV--LASPEF---ANT--GLITLWGYIFFWTALLIL 168 (356)
T ss_pred HHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH--Hhhhcc---ccc--ccccccHHHHHHHHHHHH
Confidence 3333456778899999999999999999999999999999888754 111111 000 000126888999888888
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCC
Q 017498 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (370)
Q Consensus 130 itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (370)
++..+.++..||+.-.+++ + ++ +
T Consensus 169 ~~~~~~~~~~~e~~~~~~~--~---------------------------------------------------~~--~-- 191 (356)
T TIGR00901 169 PGLLVTLFLAKEPQEDASV--P---------------------------------------------------KP--L-- 191 (356)
T ss_pred HHHHHHHHhccCCCccccc--c---------------------------------------------------hh--H--
Confidence 8777666666773110000 0 00 0
Q ss_pred CCCchhhHHHHHHHhccCC--HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHH
Q 017498 210 NDGPGAVLVNLLTSLRHLP--PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (370)
Q Consensus 210 ~~~~~~~~~~l~~si~~mP--~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~ 287 (370)
....++-++.+++-| +.++.+.+.-++.+.++.....+.+.|+.+ ++-+++ ..|.....
T Consensus 192 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~~-------------~~g~~~~~ 252 (356)
T TIGR00901 192 ----TQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD--MGFSKE-------------EIALVAKI 252 (356)
T ss_pred ----HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH-------------HHHHHhHH
Confidence 001122223333223 246666667777777777777777777654 332221 22322222
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.-.+...+..++.+++.+|+|+|+....+.++.+++.....+.
T Consensus 253 ~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 253 NGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223344556677889999999888888888777766655544
No 10
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.00 E-value=2.2e-08 Score=96.46 Aligned_cols=194 Identities=14% Similarity=0.100 Sum_probs=118.3
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
.++......+..+++.|..|+++|.+++++.+...++|.++|..+++.. -+. ...+..|.+.++.
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~-------------~g~~~~~~~~~~~ 167 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM--YAT-------------LGIKWAIWVDAVG 167 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH--HHH-------------hhHHHHHHHHHHH
Confidence 3444555667889999999999999999999999999999999888651 111 1246667666655
Q ss_pred HHHHhhheee-EeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccC
Q 017498 128 LTLCALVTIY-FADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (370)
Q Consensus 128 l~itv~~T~~-~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 206 (370)
.+++.+.... ..||++ +.+.++ .+
T Consensus 168 ~~~~~~~~~~~~~~~~~--~~~~~~---------------------------------------------------~~-- 192 (365)
T TIGR00900 168 FAISALLIVSVRIPELA--ASEIQA---------------------------------------------------LS-- 192 (365)
T ss_pred HHHHHHHHHhcccccCC--Cccccc---------------------------------------------------cc--
Confidence 5554433222 222221 000000 00
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhh-hhccccccceeecCCCCCCchhhHhHHhHHHHHHHH
Q 017498 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFF-LFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (370)
Q Consensus 207 ~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~-~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~g 285 (370)
+ +.....++-++.+++ .|.++.+++..++.+..+..+. .+...|..+ +++.++. ..| +-
T Consensus 193 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~-~~ 252 (365)
T TIGR00900 193 N----AVLRDTREGIKFVLK-NPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-YLGRGST-------------HYG-WV 252 (365)
T ss_pred h----hHHHHHHhHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCchH-------------HHH-HH
Confidence 0 000111222232332 3567788888888877777666 444444433 3433221 122 33
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+..+++...+.+++..++.||+++|++...+.++.+++++...+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (365)
T TIGR00900 253 LAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP 298 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc
Confidence 4556677777788888999999999999998888888877666554
No 11
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.92 E-value=9.9e-08 Score=93.17 Aligned_cols=189 Identities=13% Similarity=0.109 Sum_probs=120.6
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++......+.-+++.|..|+++|.+++++.+.+..+|.++|..+++.. .+.. ..+..|.+.+++
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~-------------~~~~~~~~~~~~ 168 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI--LVWL-------------SWHAIFAFLSLA 168 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHc-------------CHHHHHHHHHHH
Confidence 4555566677889999999999999999999999999999998887641 1111 246677776666
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCC
Q 017498 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
.++..+...+..||.+.++++ + +
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~--~-------------------------------------------------------~ 191 (385)
T TIGR00710 169 GILLSALIFFILPETLPYEAR--I-------------------------------------------------------Q 191 (385)
T ss_pred HHHHHHHHHHhCCCCCCCccc--C-------------------------------------------------------C
Confidence 666655555566664211100 0 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHH
Q 017498 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (370)
Q Consensus 208 ~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~ 287 (370)
. +.....+++++ + .+.++.+.+..++.+.+++.+..+...|..+ .++.++. ..|. -+.
T Consensus 192 ~--~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~g~-~~~ 249 (385)
T TIGR00710 192 I--STYFETFLLLL---K--SKMFWGYALIYGASFGGFFAFFSGAPFVYID-IMGVSPS-------------VFGL-LFA 249 (385)
T ss_pred H--HHHHHHHHHHH---c--CchhHHHHHHHHHHHHHHHHHHHcChHHHHH-HcCCCHH-------------HHHH-HHH
Confidence 0 00011122222 2 2456667777778888888877776665543 3333331 1222 234
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.+.+...+.+++..++.+|+++|+....+.++.+++.+.+.+.
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEIT 292 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677778888999999999999888888777776665554
No 12
>PRK09848 glucuronide transporter; Provisional
Probab=98.90 E-value=1.3e-07 Score=95.91 Aligned_cols=87 Identities=16% Similarity=0.069 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
|.++.++++.++.+.++..+..+...|. +++++. ++ ..+.+.+....+...+.+.+.+++.+|+|
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~-~~-------------~~~~~~~~~~~~~~~~~~~l~~~l~~r~g 292 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYV-RYVLND-TG-------------LFTVLVLVQNLVGTVASAPLVPGMVARIG 292 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeE-eeecCC-hH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4578888999999998888776544444 435542 21 12233333334445566778899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.|+++.++.++.+++.+.+.+.
T Consensus 293 ~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 293 KKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999888887666543
No 13
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.84 E-value=2.9e-07 Score=91.12 Aligned_cols=188 Identities=14% Similarity=0.044 Sum_probs=116.4
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
++......+..+++.|..|+++|.+++++.+....+|.++|..+++.. .... ..+..|.+.+++.
T Consensus 103 ~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l--~~~~-------------g~~~~~~~~~~~~ 167 (392)
T PRK10473 103 IGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI--MLKF-------------PWQSLFYTMAAMG 167 (392)
T ss_pred hhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhCc-------------ChHHHHHHHHHHH
Confidence 444455667889999999999999999999988888888888776541 1111 2466677766666
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCC
Q 017498 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (370)
Q Consensus 129 ~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (370)
++..+++.+..||.+.++++ + + .
T Consensus 168 ~i~~~~~~~~~~~~~~~~~~--~----------------------------------------------------~--~- 190 (392)
T PRK10473 168 ILVLLLSLFILKETRPARAP--A----------------------------------------------------A--S- 190 (392)
T ss_pred HHHHHHHHHHcCCCCCcccC--C----------------------------------------------------c--c-
Confidence 66666666667776321100 0 0 0
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHH
Q 017498 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (370)
Q Consensus 209 ~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~ 288 (370)
...++..+.+++ +..+..++..++.+.+...+..+...|.-+ .++-+++ ..| .-+..
T Consensus 191 ------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~~-~~~~~ 247 (392)
T PRK10473 191 ------SKPRENSESLLN--RFFLSRLVITTLSVTVILTFVNTSPVLLME-QMGFSRG-------------EYA-IIMAL 247 (392)
T ss_pred ------chHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HcCCCHH-------------HHH-HHHHH
Confidence 001111122221 334455556666666666655444333322 2221211 122 33455
Q ss_pred HHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 289 ~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+++...+.+++.+++.+|+|+|+++.++.++.+++++.+.+..
T Consensus 248 ~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~ 290 (392)
T PRK10473 248 TAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSP 290 (392)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777778888899999999999999999998888887766654
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.76 E-value=2.8e-07 Score=91.45 Aligned_cols=193 Identities=15% Similarity=0.089 Sum_probs=116.8
Q ss_pred HHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHH
Q 017498 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (370)
Q Consensus 46 llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~a 125 (370)
+.-++.........+++.|..|+++|.+++++......+|+.++..++.. ..+. .+.+..|.+.+
T Consensus 112 l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--~~~~-------------~~~~~~~~~~~ 176 (406)
T PRK11551 112 LTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVL--AAGD-------------AAWRHIFYVGG 176 (406)
T ss_pred HHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hccc-------------cCHHHHHHHHH
Confidence 33455566667788999999999999999999999999999999888754 1111 13567777766
Q ss_pred HHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhccccccc
Q 017498 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 205 (370)
Q Consensus 126 i~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 205 (370)
++.++...+..+..||.|....+..+ ++
T Consensus 177 ~~~~~~~~~~~~~l~~~~~~~~~~~~---------------------------------------------------~~- 204 (406)
T PRK11551 177 VGPLLLVPLLMRWLPESRAFAQAAGA---------------------------------------------------GK- 204 (406)
T ss_pred HHHHHHHHHHHHhCCCChhHHhccCc---------------------------------------------------ch-
Confidence 66555555555667886422111000 00
Q ss_pred CCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHH
Q 017498 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 285 (370)
Q Consensus 206 ~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~g 285 (370)
+ .....+.+++.. ..+..+.+++..++.....+.+..|...|+.+ ++-++. .. .+.
T Consensus 205 -~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~~-~~~ 260 (406)
T PRK11551 205 -Q-----RAPVLRALFGEG--RATATLLLWISYFFTLIVLYFLLNWLPSLLVG--QGLSRS-------------QA-GLV 260 (406)
T ss_pred -h-----hhhhHHHHhhhh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCChh-------------hh-hHH
Confidence 0 001111222111 11234455666666666666666666666544 222221 11 233
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
...+.+...+.+++..++.+|+|+|++..++.+..+++++...+
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 304 (406)
T PRK11551 261 QIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAA 304 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 45566677778888899999999999988877766666554443
No 15
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.74 E-value=5.7e-07 Score=86.84 Aligned_cols=191 Identities=14% Similarity=0.070 Sum_probs=114.2
Q ss_pred HHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHH
Q 017498 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (370)
Q Consensus 46 llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~a 125 (370)
+.-++......+..+++.|..|+++|.+++++.+.+.++|+++|..+++.. .++ ...|..|.+.+
T Consensus 91 l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~--------------~~~~~~~~~~~ 155 (399)
T TIGR00893 91 LLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI-LIH--------------FSWQWAFIIEG 155 (399)
T ss_pred HHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH-HHh--------------CCchHHHHHHH
Confidence 334555566777889999999999999999999999999999998877531 110 12567787777
Q ss_pred HHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhc-cccccCCCCCCCCCCCCCccCCcccchhhhhhcccccc
Q 017498 126 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNA-ISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (370)
Q Consensus 126 i~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 204 (370)
++.++..++..+..||+|.++....+ .+++. .++...+ ...++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--------------------------~~~~~ 199 (399)
T TIGR00893 156 VLGIIWGVLWLKFIPDPPQKAKWLTE----------EEKYIVVGGLLAE--------------------------QQGKG 199 (399)
T ss_pred HHHHHHHHHhhheecCCCCccccCCH----------HHHhhcchhhccc--------------------------ccccc
Confidence 76666666666667776432211000 00000 0000000 00000
Q ss_pred cCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHH
Q 017498 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (370)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~ 284 (370)
+ + ......++++++. +.++.+++..++.+.++..+..|.+.|+.+ .++.++. .. .+
T Consensus 200 ~-~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~-~~ 255 (399)
T TIGR00893 200 P-S---TPKKYQIKELLKD-----RRVWGLALGQFLVNIGLGFFLTWFPTYLVQ-ERGLSIL-------------EA-GF 255 (399)
T ss_pred c-c---CCCccchHHHhcC-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhcccHH-------------Hh-hH
Confidence 0 0 0011123333332 568888999999999999999888888765 3332221 11 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
-...+.+...+.+++..++.+|+++|+
T Consensus 256 ~~~~~~~~~~~~~~~~g~~~~~~~~~~ 282 (399)
T TIGR00893 256 MASLPGIVGFIGMILGGRLSDLLLRRG 282 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 234555666667777788888888775
No 16
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.72 E-value=6.4e-07 Score=87.26 Aligned_cols=180 Identities=13% Similarity=0.089 Sum_probs=103.8
Q ss_pred ccchhhHHHHhcCCCchhhhhH--HHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 017498 53 TVQGPARALLADLSGPDQRNSA--NAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a--~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~i 130 (370)
.......+++.|..|+++|.++ +++.....++|+++|..+++.. .+. ...|..|.+.+++.++
T Consensus 103 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l--~~~-------------~~~~~~f~~~~~~~~~ 167 (375)
T TIGR00899 103 TANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL--ALG-------------FGFTVMFLTAALAFVL 167 (375)
T ss_pred hhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH--HHh-------------cccHHHHHHHHHHHHH
Confidence 3333456777888887776654 5667777788999988877641 111 1357788888877777
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCC
Q 017498 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (370)
Q Consensus 131 tv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (370)
+.++..+..||.|..+.+ + + +.
T Consensus 168 ~~~~~~~~~~~~~~~~~~--~----------------------------------------------------~--~~-- 189 (375)
T TIGR00899 168 CGVLVWLFLPSYPRGAPG--A----------------------------------------------------L--TR-- 189 (375)
T ss_pred HHHHHHHhCCCcccCccc--c----------------------------------------------------c--Cc--
Confidence 777666677885421100 0 0 00
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHH
Q 017498 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (370)
Q Consensus 211 ~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~s 290 (370)
..+++.+ ..+..+.+.+..++.|.++..+..+...|+-+ .++.++. + .| +.+...+
T Consensus 190 ----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~----~g-~~~~~~~ 245 (375)
T TIGR00899 190 ----LEVRGLL-----ASRDTRLLFVACTLMWGCNILYIINMPLLIIH-ELGLPDK---------L----AG-LMMGTAA 245 (375)
T ss_pred ----chhhhhh-----cCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCHH---------H----HH-HHHHHHH
Confidence 0011111 12446666677777777665555554445433 2332221 1 12 2223344
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+...+..++..++.+|+|+|++..++.++.+++++.+.+
T Consensus 246 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 284 (375)
T TIGR00899 246 GLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAA 284 (375)
T ss_pred HHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHH
Confidence 445555667789999999999888887776665544443
No 17
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.72 E-value=8.7e-08 Score=91.93 Aligned_cols=200 Identities=19% Similarity=0.292 Sum_probs=118.0
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
..++.........+++.|..|+++|.+++++.+...++|.++|..+++.. .+.+ ..+..|.+.++
T Consensus 95 ~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~~-------------~~~~~~~~~~~ 159 (352)
T PF07690_consen 95 LGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFL--ISYF-------------GWRWAFLISAI 159 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CCHC-------------HHCCHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhh--hhcc-------------ccccccccccc
Confidence 34555667788899999999999999999999999999999999888652 1111 24667887777
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccC
Q 017498 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 206 (370)
+.+++.++..+..+|++.++.+.++.+ + ..+++
T Consensus 160 ~~~~~~il~~~~~~~~~~~~~~~~~~~------~----------------------------------------~~~~~- 192 (352)
T PF07690_consen 160 LSLIAAILFILFLPEPPPPRERESPKE------S----------------------------------------ESKKP- 192 (352)
T ss_dssp HHHHHHHHHHCCC---STTTT--SSTT------T----------------------------------------T--HH-
T ss_pred hhhhhhhhHhhhhhhcccccccccccc------c----------------------------------------ccccc-
Confidence 777776654455555433222211100 0 00000
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHH
Q 017498 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (370)
Q Consensus 207 ~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl 286 (370)
.+ ....++.+.+. +.++.+.+..+...+.+..+..+...|+.+ .++.+ |.....+-+
T Consensus 193 ~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-------------~~~~~~~~~ 249 (352)
T PF07690_consen 193 KP----LKPGFKSLFKN-----PVLWILLIAFFLFFFVFSGFSFFLPLYLQE-VLGFS-------------GPSQAGLLF 249 (352)
T ss_dssp HC----CCH-CTHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHCC-------------THHHHHHHH
T ss_pred cc----ccccccccccc-----chhhhhhhhhhHHHHHHHHhhcccchhhhh-ccCCC-------------HHHHHHHHH
Confidence 00 00012222222 122334444444455777777777777544 44433 111122234
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 287 ~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+..++..+.+++..++.+|+++|+..........++.+...+..
T Consensus 250 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (352)
T PF07690_consen 250 SIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLP 294 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 556666777788889999999988777777777766666655554
No 18
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.66 E-value=1.3e-06 Score=85.64 Aligned_cols=183 Identities=17% Similarity=0.185 Sum_probs=114.4
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++......+..+++.|..|+++|.++.++.....++|+++|..+++. ..+. ...+..|.+.+++
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--l~~~-------------~~~~~~~~~~~~~ 154 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGW--LLVW-------------FSWHAIFWVLALA 154 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH-------------cChHHHHHHHHHH
Confidence 455555667788999999999999999999999999999999887753 1111 0246677777666
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCC
Q 017498 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
.++..++..+..||++.++++ ++ .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~-~~-------------------------------------------------------~ 178 (377)
T PRK11102 155 AILAAALVFFFIPETLPKERR-QP-------------------------------------------------------F 178 (377)
T ss_pred HHHHHHHHHHhCCccCccccc-CC-------------------------------------------------------C
Confidence 666666666667775321100 00 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHH
Q 017498 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (370)
Q Consensus 208 ~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~ 287 (370)
+. ++....+++++ + - +.++..++..++.+.+++.+..+...+.-+ .++-++. ..| +-+.
T Consensus 179 ~~-~~~~~~~~~~~---~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-------------~~g-~~~~ 237 (377)
T PRK11102 179 HL-RTTIRNFASLF---R-H-KRVLGYMLASGFSFAGMFSFLTAGPFVYIE-LNGVSPQ-------------NFG-YYFA 237 (377)
T ss_pred Ch-HHHHHHHHHHH---c-C-hHHHHHHHHHHHHHHHHHHHHHcCHHHHHH-HhCCCHH-------------HHH-HHHH
Confidence 00 00011222222 2 2 345667778888888888777665554433 2332221 122 2344
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFA 322 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~ 322 (370)
.+.+...+.+++..++.+|+|+|+++..+.++..+
T Consensus 238 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~ 272 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFI 272 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 56667777788889999999999988887765433
No 19
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.64 E-value=1.5e-06 Score=86.84 Aligned_cols=178 Identities=12% Similarity=0.022 Sum_probs=102.2
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhccccc-ccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~-~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
+.........+++.|.+|++||.++|++.+....+|.++|-.+|++. ++. ....+.+.+.++
T Consensus 101 ~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-----------------~~~~~~i~~~~~ 163 (393)
T PRK11195 101 GAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-----------------AEAALAVCALIY 163 (393)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Confidence 33334445578999999999999999999999999999999998762 110 234455544444
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCC
Q 017498 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (370)
Q Consensus 129 ~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (370)
+++.+ ..+.+||.+.++.. .+ + +.
T Consensus 164 ~~~~~-~~~~l~~~~~~~~~-~~----------------------------------------------------~--~~ 187 (393)
T PRK11195 164 LLAAL-FNLFIPRLGARRPG-QS----------------------------------------------------W--NP 187 (393)
T ss_pred HHHHH-HHhcCCCCcccccc-cC----------------------------------------------------C--CH
Confidence 44433 33556775321100 00 0 00
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHH
Q 017498 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (370)
Q Consensus 209 ~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~ 288 (370)
......+++-++.+.+-|+ ++...+..++.|.....+.+....|+.+ .++.++. ..| +-+..
T Consensus 188 --~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lg~s~~-------------~~G-~~~~~ 249 (393)
T PRK11195 188 --IALLRDFFHACRVLWRDKL-GRFSLAGTTLFWGAGATLRFLVLAWAPV-ALGITLN-------------QPA-YLQAV 249 (393)
T ss_pred --HHHHHHHHHHHHHHHhCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChh-------------HHH-HHHHH
Confidence 0000011111223333333 4444445555677766666666666643 5554442 222 23456
Q ss_pred HHHHHHHHHHHHHHHHhhhCchHHHHHHHH
Q 017498 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNF 318 (370)
Q Consensus 289 ~siv~~l~s~il~~l~~~ig~r~v~~~s~~ 318 (370)
+++...+.+++..++.+|.+.|++..++.+
T Consensus 250 ~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~ 279 (393)
T PRK11195 250 VAIGIAVGAGAAARLVTLETVLRVLPAGIL 279 (393)
T ss_pred HHHHHHHHHHHHHHHhcCCcccchHHHHHH
Confidence 666777778888999888888887777753
No 20
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.61 E-value=8.5e-07 Score=92.50 Aligned_cols=206 Identities=19% Similarity=0.213 Sum_probs=130.6
Q ss_pred cccchhh-HHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 017498 52 NTVQGPA-RALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (370)
Q Consensus 52 n~~q~P~-RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~i 130 (370)
+....|+ .|++.|++|++|-..||++.+....+..++|-++|++ ...+. ....+|.+.++.+++
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~-----Lva~~----------G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGI-----LVAFF----------GAAAAFLINALSFLI 181 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHH-----HHHHH----------HHHHHHHHHHHHHHH
Confidence 4455555 5799999999999999999999999999999999886 22222 245678888877777
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCC
Q 017498 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (370)
Q Consensus 131 tv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (370)
.+. .+...|.++ ++++ . .+ |
T Consensus 182 ~i~-~l~~~~~~~-~~~~--~--------------------------------------------------~~---e--- 201 (524)
T PF05977_consen 182 SIL-ALLRWKPPP-PPSS--L--------------------------------------------------PR---E--- 201 (524)
T ss_pred HHH-HHHHccccc-cccc--c--------------------------------------------------ch---h---
Confidence 544 334444321 0000 0 00 1
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHH
Q 017498 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (370)
Q Consensus 211 ~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~s 290 (370)
+....+++=++-+++= |.++.+.+..++.-+.-.+++... ..+.++.+++++. .+|-+ +..++
T Consensus 202 -~~~~~l~~G~ryv~~~-~~l~~~l~~~~~~~l~~~a~~aLl-Pl~a~~~l~~~a~-------------~yGll-~a~~g 264 (524)
T PF05977_consen 202 -RFFSALREGLRYVRSS-PPLRSVLLRSFLFNLFASAVWALL-PLFARDVLGGGAS-------------GYGLL-LAAFG 264 (524)
T ss_pred -hhhhhHHHHHHHHhcc-hHHHHHHHHHHHHHHhhhHHHHhh-hHHHHHHhCCcHH-------------HHHHH-HHHHH
Confidence 1122355555555544 456666554444333323333222 2333445665543 12221 33444
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhcccccc
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAR 369 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~~~a~ 369 (370)
+-+.+-+++++++.++++.+++...+.++++++++.+.+.+ +.+.+.+.+.+.|+.|.+
T Consensus 265 vGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--------------------~~~~~~~~l~l~G~~~~~ 323 (524)
T PF05977_consen 265 VGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--------------------SFWLALIALFLAGAAWII 323 (524)
T ss_pred HHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--------------------HHHHHHHHHHHHHHHHHH
Confidence 45666678899999999999999999999999988888776 668888888889988764
No 21
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.60 E-value=2.1e-06 Score=83.49 Aligned_cols=205 Identities=13% Similarity=0.055 Sum_probs=115.1
Q ss_pred cccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHH-HHHHHHHHH
Q 017498 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF-LVAVVFLTL 130 (370)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f-~i~ai~l~i 130 (370)
+....+.-+++.|..|+++|.+++++...+..+|..+|..++... .........+. -....++.| ++.+++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l-~~~~~~~~~~~----~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 105 GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI-IGSLIFGAGLP----AHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHhccccc----ccccccchhHHHHHHHHHH
Confidence 344567889999999999999999999988888988887776431 11000000000 001345566 433444444
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCC
Q 017498 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (370)
Q Consensus 131 tv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (370)
..++.....+|.|.+++++.+.+ . .+ .+. ..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~---~------------~~------------------------------~~~---~~- 210 (366)
T TIGR00886 180 PALLIFFVGADTPPGKPATGKLS---F------------KG------------------------------ARW---SV- 210 (366)
T ss_pred HHHHHHHhcccCCcccccchhcc---c------------cc------------------------------ccc---cc-
Confidence 44445556677653221100000 0 00 000 00
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHH
Q 017498 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (370)
Q Consensus 211 ~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~s 290 (370)
.....++..+.++ - +..+.+++..++.+..+..+..+.+.|..+ .++-++. ..|.+ +.++.
T Consensus 211 --~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~~~~-~~~~~ 271 (366)
T TIGR00886 211 --GTGALGDQLKVFR-D-RHTWILALLYSVTFGSFLGVSSIFAMFFKD-QFGLSKV-------------TAGAY-ASLGG 271 (366)
T ss_pred --cchhHHHHHHHHh-c-cchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHH-------------HHHHH-HHHHH
Confidence 0001122223222 2 346777788888888888888777777755 4443332 12222 33455
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+...+..++..++.+|+|+|+.+..+..+.+.+++...+
T Consensus 272 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~ 310 (366)
T TIGR00886 272 LLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVL 310 (366)
T ss_pred HHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHh
Confidence 566666777788999999999888888777776665544
No 22
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.58 E-value=4.5e-06 Score=83.51 Aligned_cols=227 Identities=18% Similarity=0.203 Sum_probs=131.2
Q ss_pred hccCCcccccccCC-CcchhHHHH------------------------------------HHHHHHHhhcccccchhhHH
Q 017498 18 ILGDTKEHCSKFRG-TRTRAAFVF------------------------------------VIGFWLLDLANNTVQGPARA 60 (370)
Q Consensus 18 ~lgd~s~~~~~~~g-~r~~~I~l~------------------------------------v~gv~llD~s~n~~q~P~RA 60 (370)
++|..||+..+-.| ||.|.|+.. ++.+.+.-+++++.|+|.-|
T Consensus 33 ~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lA 112 (403)
T PF03209_consen 33 WFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLA 112 (403)
T ss_pred HhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHH
Confidence 46888887654444 456777765 34455667899999999999
Q ss_pred HHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEee
Q 017498 61 LLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFAD 140 (370)
Q Consensus 61 li~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~ 140 (370)
|+.|.+|||+|.++-++.=.|.=+|-+++..+.+. -++. |.. ..++.++-..+++.++-.++.++-+
T Consensus 113 Ll~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~-lL~~---~s~--------~rL~~v~~~~a~i~~~l~~ia~wg~- 179 (403)
T PF03209_consen 113 LLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGR-LLDP---FSP--------ERLIQVIQGVALIALLLNLIALWGQ- 179 (403)
T ss_pred HHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHH-Hccc---cCH--------HHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999999999999999999988898888776554 1222 221 2344444444333333333333333
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHH
Q 017498 141 EVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNL 220 (370)
Q Consensus 141 E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 220 (370)
|++.+..... + +++...|++-
T Consensus 180 E~r~~~~~~~----------------------------------------------------~-------~~~~~~f~~a 200 (403)
T PF03209_consen 180 EPRRSRRAAA----------------------------------------------------A-------ERPRPPFREA 200 (403)
T ss_pred ccCCcccccC----------------------------------------------------C-------CCCCccHHHH
Confidence 4322111100 0 0112346777
Q ss_pred HHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 017498 221 LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLI 300 (370)
Q Consensus 221 ~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il 300 (370)
++.+.. .++-|+..+.-+++=++++--=.---.|=|| ||+=.+.++..=...+.- |. |+.+..+ ++
T Consensus 201 ~~~~~~-~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~-Vfgmsv~eTT~Lta~~~~----G~--L~G~~~~----g~-- 266 (403)
T PF03209_consen 201 WRQVWA-SPQARRFFVFLFLGTLAFFMQDVILEPYGGE-VFGMSVGETTRLTAFWGG----GT--LLGMLLA----GF-- 266 (403)
T ss_pred HHHHHh-CCChhHHHHHHHHHHHHHHhhHHHcCCchhH-HcCCCHHHHHHHHHHHHH----HH--HHHHHHH----HH--
Confidence 777663 3455666666666666666555555566666 776555422111111221 22 1111111 22
Q ss_pred HHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 301 EPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 301 ~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.++.+.+++-..+..+.++|+....+..
T Consensus 267 -~l~~~~~~~~~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 267 -LLSRRLGKKRTAALGCLLGALAFALIILAG 296 (403)
T ss_pred -HhcCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 234677888877788888877877655544
No 23
>PRK03545 putative arabinose transporter; Provisional
Probab=98.58 E-value=3.7e-06 Score=83.35 Aligned_cols=170 Identities=16% Similarity=0.201 Sum_probs=100.3
Q ss_pred chhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 017498 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (370)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~ 134 (370)
.....+++.|..|+++|++++++.+...++|.++|..+++. +.+.+ ..|+.|.+.+++.++...+
T Consensus 115 ~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~--l~~~~-------------gw~~~f~~~~~~~~l~~~~ 179 (390)
T PRK03545 115 WSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRV--IGQYL-------------GWRTTFLAIGGGALITLLL 179 (390)
T ss_pred HHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHH--HHHHh-------------cHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999887754 11111 2467777776665555444
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCch
Q 017498 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (370)
Q Consensus 135 T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (370)
.....||.|. + + + ++ .
T Consensus 180 ~~~~~~~~~~---~--~----------------------------------------------------~--~~-----~ 195 (390)
T PRK03545 180 LIKLLPLLPS---E--H----------------------------------------------------S--GS-----L 195 (390)
T ss_pred HHHhCCCCCC---C--C----------------------------------------------------c--ch-----H
Confidence 4444454310 0 0 0 00 0
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHH
Q 017498 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (370)
Q Consensus 215 ~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~ 294 (370)
+.++++++. +.++.++...++...+.+....|...|..+ .++.+++ .. .+.+..+++...
T Consensus 196 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~-------------~~-~~~~~~~~~~~~ 255 (390)
T PRK03545 196 KSLPLLFRR-----PALVSLYLLTVVVVTAHFTAYSYIEPFVQQ-VAGLSEN-------------FA-TLLLLLFGGAGI 255 (390)
T ss_pred HHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCcc-------------HH-HHHHHHHHHHHH
Confidence 112222222 345555555555555555544555555543 3333332 11 233556677778
Q ss_pred HHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 017498 295 VSSFLIEPMCRWIGSRLVWAISNFIVFACM 324 (370)
Q Consensus 295 l~s~il~~l~~~ig~r~v~~~s~~i~a~~~ 324 (370)
+.+++..++.+|+++|.+... ..+.++++
T Consensus 256 ~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~ 284 (390)
T PRK03545 256 IGSVLFSRLGNRHPSGFLLIA-IALLLVCL 284 (390)
T ss_pred HHHHHHHHHhhccchhHHHHH-HHHHHHHH
Confidence 888889999999998876544 44444444
No 24
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.55 E-value=2e-06 Score=88.76 Aligned_cols=80 Identities=13% Similarity=0.128 Sum_probs=57.4
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-+.....+.+..|++.|..|+++|.+++++......+|.++|..++.. +.+. + ..-|..|.+.+++
T Consensus 118 ~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~--l~~~--~----------~GWr~~f~i~a~l 183 (491)
T PRK11010 118 AFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALW--LADR--Y----------LGWQGMYWLMAAL 183 (491)
T ss_pred HHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHhc--c----------cCHHHHHHHHHHH
Confidence 345556777888999999999999999999999899999988766643 1110 0 0257788887766
Q ss_pred HHHHhhheeeEeecc
Q 017498 128 LTLCALVTIYFADEV 142 (370)
Q Consensus 128 l~itv~~T~~~v~E~ 142 (370)
.+++.+.+.+ +||+
T Consensus 184 ~ll~~l~~~~-~~e~ 197 (491)
T PRK11010 184 LIPCIIATLL-APEP 197 (491)
T ss_pred HHHHHHHHHh-cCCC
Confidence 6666555544 6875
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.53 E-value=3e-06 Score=87.30 Aligned_cols=221 Identities=15% Similarity=0.055 Sum_probs=124.0
Q ss_pred hhHHHHhcC-CCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 57 PARALLADL-SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 57 P~RAli~D~-~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
..-+.+.|. .|+++|.+++++.+...++|.++|-.+|+. +.+.+ ..|++|.+...+.+++.+++
T Consensus 114 ~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~--l~~~~-------------gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 114 ATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGI--LLEHF-------------YWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccC-------------ChHHHHHHHHHHHHHHHHHH
Confidence 345556565 578999999999999999999999998875 21111 25788988887777777777
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcchhc---------cccccCCCCCCCCCCCCCccC-Ccccchhhhhh-cccccc
Q 017498 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNA---------ISKSKHDMPAAPNANGNKVES-GHESDANLKHI-SKKAED 204 (370)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~-~~~~~~ 204 (370)
.+..||++-++.+ ..|....-. ....... .++.+... ........-.. ....++
T Consensus 179 ~~~l~~~~~~~~~---------~~d~~g~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~f~~~e 243 (495)
T PRK14995 179 ARYVPRQAGRRDQ---------PLNLGHALMLIVAILLLVYSAKTAL------KGFLSLWVTSLTLLTGALLLGLFIRTQ 243 (495)
T ss_pred HHhCCCCCCCCCC---------CCChHhHHHHHHHHHHHHHHHHhcc------ccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7777875421110 011110000 0000000 00000000 00000000000 000000
Q ss_pred cCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHH
Q 017498 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (370)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~ 284 (370)
. . ...+.-. .++++ .+..+..++..++..++++++.+|...|..+ +++-+|. +.| .
T Consensus 244 ~-~--~~~p~~~-~~lf~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~-v~g~s~~-------------~ag-~ 299 (495)
T PRK14995 244 L-A--ASRPMID-MRLFT-----HRIILSGVVMAMTAMITLVGFELLMAQELQF-VHGLSPL-------------EAG-M 299 (495)
T ss_pred h-c--CCCCCcC-HHHhC-----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH-------------HHH-H
Confidence 0 0 0001000 12222 2456677788888888888888888888765 5554442 222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
-+..+++...+.+.+..++.+|+|+|++...+.++.+++++.+.++.
T Consensus 300 ~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~ 346 (495)
T PRK14995 300 FMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD 346 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 35566777788888889999999999999989888888876665543
No 26
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.53 E-value=2.9e-06 Score=81.93 Aligned_cols=186 Identities=9% Similarity=0.045 Sum_probs=106.0
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhh-hcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF-SAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy-~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
-++......+..+++.|..|+++|.+++++.+....+|+++|. +++... ... ...+..|.+.++
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~-------------~~~~~~~~~~~~ 158 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGI--AEL-------------YSWHWVFIVPGI 158 (379)
T ss_pred HhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHH--Hhc-------------CCchhHHHHHHH
Confidence 4556667778888999999999999999999999999999988 454331 110 123556777666
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccC
Q 017498 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 206 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 206 (370)
+.++..++..+..||.|..+..+.. + +...++. +. +..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~--------~~---------------------------~~~~~-- 198 (379)
T TIGR00881 159 IAIIVSLICFLLLRDSPQSCGLPPA--E-EMPNEEP--------DG---------------------------DAEKK-- 198 (379)
T ss_pred HHHHHHHHHheeeCCCccccccCcc--c-cCccccc--------cc---------------------------ccccc--
Confidence 6666556666777776432211000 0 0000000 00 00000
Q ss_pred CCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHH
Q 017498 207 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 286 (370)
Q Consensus 207 ~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl 286 (370)
++.........+++++ .+.++.+++..++.+.+...+..|...|+.+ .++-++. .. .+-+
T Consensus 199 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~-~~~~ 258 (379)
T TIGR00881 199 EEELTKKQIFLQYVLL-----NKVLWYISLGYVFVYVVRTGILDWSPLYLTQ-EKGFSKE-------------KA-SWAF 258 (379)
T ss_pred cccccchHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHH-------------HH-HHHH
Confidence 0000001112223322 2467888999999999988888888888765 3333321 11 2334
Q ss_pred HHHHHHHHHHHHHHHHHHhhhC
Q 017498 287 LLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 287 ~~~siv~~l~s~il~~l~~~ig 308 (370)
..+++...+..++..++.+|+.
T Consensus 259 ~~~~~~~~~~~~~~g~l~~r~~ 280 (379)
T TIGR00881 259 TLYELGGLVGTLLAGWLSDKLF 280 (379)
T ss_pred HHHHHHcchhHHHHHHHHHHHc
Confidence 4555666666677777777653
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=98.52 E-value=1.9e-06 Score=83.96 Aligned_cols=84 Identities=18% Similarity=0.165 Sum_probs=58.4
Q ss_pred HHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHH
Q 017498 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (370)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ 124 (370)
.+.-++......+..+++.|..|+++|.+++++......+|+++|..+++.. .+ .. ..+..|.+.
T Consensus 113 ~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~-~~-------------g~~~~~~~~ 177 (398)
T TIGR00895 113 FLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL-IP-VF-------------GWRSLFYVG 177 (398)
T ss_pred HHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH-hh-cc-------------cceeehhhh
Confidence 3445667778889999999999999999999999999999999998877541 11 11 124445555
Q ss_pred HHHHHHHhhheeeEeeccC
Q 017498 125 VVFLTLCALVTIYFADEVP 143 (370)
Q Consensus 125 ai~l~itv~~T~~~v~E~p 143 (370)
+++.++...+.....||.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~ 196 (398)
T TIGR00895 178 GIAPLLLLLLLMRFLPESI 196 (398)
T ss_pred hhHHHHHHHHHHHhCCCCC
Confidence 4444444444455567753
No 28
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.52 E-value=3.3e-06 Score=94.91 Aligned_cols=205 Identities=13% Similarity=0.084 Sum_probs=113.9
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+.-....+..+++.|.+|+++|.+++++.+...++|.++|..+|+.. ...+. . +. ...........+.+.++ +.
T Consensus 116 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l--~~~~~-~-~~-~~~~~~~~~~~~~~~~~-~~ 189 (1146)
T PRK08633 116 QSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL--FESVN-G-NT-PSEILGRIAPAGLVLLA-VA 189 (1146)
T ss_pred HHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH--HHhhc-c-cc-ccccccchHHHHHHHHH-HH
Confidence 33344555678999999999999999999999999999999998752 11100 0 00 00001122233333322 22
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCC
Q 017498 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (370)
Q Consensus 130 itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (370)
+..++.++..||.|....+..+ + +.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------~---~~- 214 (1146)
T PRK08633 190 VLGLIFAYRLPKVPAAAPEVFD---------------------------------------------------K---KK- 214 (1146)
T ss_pred HHHHHHHhcCcCCCCCCccccc---------------------------------------------------c---cc-
Confidence 2223334455665422111000 0 00
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHH
Q 017498 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (370)
Q Consensus 210 ~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~ 289 (370)
.......++-++.+++ .+.++.+.+..++.|...+.+..+...|+.+ .++-++. ... .+-+..+
T Consensus 215 -~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~------------~~~-g~~~~~~ 278 (1146)
T PRK08633 215 -YLFPKLLWRNLKLLRS-DRVLWLAIIGLSYFWFISQLAQANFPAYAKE-VLGLDNT------------FQV-QYLLAAS 278 (1146)
T ss_pred -cccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCCCcH------------HHH-HHHHHHH
Confidence 0001112233333333 3456666777777777776666666666554 3332211 012 2334556
Q ss_pred HHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 290 siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.+.+.+++..++.+|++++++..++.++++++++.+.+..
T Consensus 279 ~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1146)
T PRK08633 279 AIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP 320 (1146)
T ss_pred HHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh
Confidence 666777788889999999988888888888777776655443
No 29
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.51 E-value=8.8e-06 Score=77.43 Aligned_cols=168 Identities=18% Similarity=0.221 Sum_probs=126.4
Q ss_pred HHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHH
Q 017498 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (370)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ 124 (370)
.+..++....+.+..+++.|..|+++|.+++++.....++|+.+|..+++.. . +. .+.|..|.+.
T Consensus 95 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~-~~-------------~~~~~~~~~~ 159 (352)
T cd06174 95 FLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL-A-ES-------------LGWRWLFLIL 159 (352)
T ss_pred HHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH-H-HH-------------hhHHHHHHHH
Confidence 3446777888999999999999999999999999999999999999887651 1 11 1256677776
Q ss_pred HHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccc
Q 017498 125 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 204 (370)
Q Consensus 125 ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 204 (370)
+++.+++.++..
T Consensus 160 ~~~~~~~~~~~~-------------------------------------------------------------------- 171 (352)
T cd06174 160 AILGLLLALLLL-------------------------------------------------------------------- 171 (352)
T ss_pred HHHHHHHHHHHH--------------------------------------------------------------------
Confidence 666555544210
Q ss_pred cCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHH
Q 017498 205 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (370)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~ 284 (370)
.++ |.++.+++..++.+.++..+..|.+.+..+ .++.++. .. .+
T Consensus 172 -----------~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~-~~ 215 (352)
T cd06174 172 -----------FLL----------RLLLLLALAFFLLSFGYYGLLTYLPLYLQE-VLGLSAA-------------EA-GL 215 (352)
T ss_pred -----------HHH----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCHH-------------HH-HH
Confidence 011 778889999999999999999999998876 3332221 12 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchH-HHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRL-VWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~-v~~~s~~i~a~~~~~~~~~~ 331 (370)
-...+.+...+.+++..++.+|+|+|+ +..++.++.+++++.+.+.+
T Consensus 216 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 263 (352)
T cd06174 216 LLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP 263 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 345666777888888899999999999 99999999999988777665
No 30
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.48 E-value=4.2e-06 Score=83.26 Aligned_cols=80 Identities=13% Similarity=0.232 Sum_probs=58.3
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcc---cccccccccccccchhhhcccchhHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG---ASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G---~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ 124 (370)
-++.........+++.|..|+++|.++.++.+...++|.++|+.++ .. +... ...|+.|.+.
T Consensus 138 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~--~~~~-------------~~w~~~f~~~ 202 (481)
T TIGR00879 138 GIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVS--LNNT-------------LGWRIPLGLQ 202 (481)
T ss_pred HhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhc--CCCC-------------ccHHHHHHHH
Confidence 3455556677899999999999999999999999999999999988 32 1000 1467788886
Q ss_pred HHHHHHHhhheeeEeeccC
Q 017498 125 VVFLTLCALVTIYFADEVP 143 (370)
Q Consensus 125 ai~l~itv~~T~~~v~E~p 143 (370)
++..++.++ ..+..||.|
T Consensus 203 ~~~~~~~~~-~~~~l~~~~ 220 (481)
T TIGR00879 203 LIPAGLLFL-GLFFLPESP 220 (481)
T ss_pred HHHHHHHHH-HHhcCCCCh
Confidence 655555443 445678865
No 31
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.47 E-value=5.3e-06 Score=80.53 Aligned_cols=190 Identities=15% Similarity=0.125 Sum_probs=111.9
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
++......+..+++.|..|+++|.++.++.+....+|.++|..++..... .+. +.. ......|..|.+.+++.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~--~~~---~~~--~~~~~w~~~~~~~~~~~ 180 (394)
T TIGR00883 108 FSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSY--LLG---DDA--LLEWGWRIPFLVSAVLV 180 (394)
T ss_pred hhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHH--hcC---HHH--hhccchHHHHHHHHHHH
Confidence 34445566778899999999999999999999999999998877643111 000 000 00113567787776666
Q ss_pred HHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCC
Q 017498 129 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 208 (370)
Q Consensus 129 ~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (370)
+++..+ ....+|.+..+.+++ ++ ++
T Consensus 181 ~~~~~~-~~~~~~~~~~~~~~~----------------------------------------------------~~--~~ 205 (394)
T TIGR00883 181 LIGLYL-RRNLEETPVFEKAQE----------------------------------------------------KH--KK 205 (394)
T ss_pred HHHHHH-HHhcCCChhHHHHHh----------------------------------------------------cc--cc
Confidence 555443 233455321110000 00 00
Q ss_pred CCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHH
Q 017498 209 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 288 (370)
Q Consensus 209 ~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~ 288 (370)
.....+++++ +-++..+.++...++.+.++..+..|...|+.+ .++-++. ..| +-+..
T Consensus 206 ----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-------------~~~-~~~~~ 263 (394)
T TIGR00883 206 ----KRGPIRETLT---KHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQ-TLGLSAN-------------SAL-LVLML 263 (394)
T ss_pred ----ccCCHHHHHH---hchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh-------------HHH-HHHHH
Confidence 0112333333 344567788888888888888777777777644 2332221 111 22344
Q ss_pred HHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHH
Q 017498 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFA 322 (370)
Q Consensus 289 ~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~ 322 (370)
+.+...+..++..++.+|+|+|++...+.++.++
T Consensus 264 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 264 SLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 5566667777888999999999987765554433
No 32
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.46 E-value=9.9e-06 Score=80.04 Aligned_cols=188 Identities=16% Similarity=0.152 Sum_probs=108.6
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
....+..+++.|..|+++|.+++++......+|.++|..+++.. .+. ...+..|.+.+++.+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l--~~~-------------~~~~~~~~~~~~~~~~~~ 186 (408)
T PRK09874 122 GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL--ADS-------------YGLRPVFFITASVLFLCF 186 (408)
T ss_pred hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHH-------------hCHHHHHHHHHHHHHHHH
Confidence 34566778999999999999999999999999999988877641 111 135667777777766666
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCC
Q 017498 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (370)
Q Consensus 133 ~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (370)
++..+..||++.+.++ + +
T Consensus 187 ~~~~~~~~~~~~~~~~--~-------------------------------------------------------~----- 204 (408)
T PRK09874 187 LVTLFCIRENFQPVSK--K-------------------------------------------------------E----- 204 (408)
T ss_pred HHHHHHhccCcccccc--h-------------------------------------------------------h-----
Confidence 6666667775311100 0 0
Q ss_pred chhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHH
Q 017498 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (370)
Q Consensus 213 ~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv 292 (370)
....++.++.++ -|+.++.++...++..++...+..+...|+.+ .. ++.. ...+. .|.. ..++.+.
T Consensus 205 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~-----~~~~~----~g~~-~~~~~l~ 270 (408)
T PRK09874 205 -MLHMREVVTSLK-NPKLVLSLFVTTLIIQVATGSIAPILTLYVRE-LA-GNVS-----NIAFI----SGMI-ASVPGVA 270 (408)
T ss_pred -hhHHHHHHHhCc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-ccch-----HHHHH----HHHH-HHHHHHH
Confidence 001233333332 34444545444444444443333344444433 11 1111 00111 1111 2234455
Q ss_pred HHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 293 ~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
..+...+..++.+|+|+|++..++.++.+++++...+.+
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 309 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ 309 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc
Confidence 556666678899999999999999888777776555443
No 33
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.46 E-value=8.1e-06 Score=81.41 Aligned_cols=74 Identities=14% Similarity=0.076 Sum_probs=50.6
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
..-+..+++.|..|++||.+++++...-.++|.++|..++.. +.+. . ..-|..|.+.+++.+++.+
T Consensus 111 ~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~--l~~~---~---------~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 111 QDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW--LADR---V---------LGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH--HHhc---c---------cCHHHHHHHHHHHHHHHHH
Confidence 334778999999999999999999998778888888766543 1110 0 0246677776666655544
Q ss_pred heeeEeecc
Q 017498 134 VTIYFADEV 142 (370)
Q Consensus 134 ~T~~~v~E~ 142 (370)
. .+..||+
T Consensus 177 ~-~~~~~e~ 184 (402)
T PRK11902 177 T-TLWAPEP 184 (402)
T ss_pred H-HHhcCCC
Confidence 3 3456765
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.45 E-value=7.4e-06 Score=81.93 Aligned_cols=73 Identities=15% Similarity=0.049 Sum_probs=50.6
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
...+.-+++.|.+|++++.+++++.....++|.++|..+++.. .+ . ...++.|.+.++..+++.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l-~~-~-------------~~~~~~~~~~~~~~~~~~~ 191 (417)
T PRK10489 127 GVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL-IA-A-------------GGVAWNYGLAAAGTFITLL 191 (417)
T ss_pred HHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH-HH-H-------------HhhHHHHHHHHHHHHHHHH
Confidence 3455677899999999999999999999999999999988651 11 0 0235566666665555544
Q ss_pred heeeEeecc
Q 017498 134 VTIYFADEV 142 (370)
Q Consensus 134 ~T~~~v~E~ 142 (370)
+ ++..||.
T Consensus 192 ~-~~~l~~~ 199 (417)
T PRK10489 192 P-LLRLPAL 199 (417)
T ss_pred H-HHhCCCC
Confidence 3 3445654
No 35
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.45 E-value=5e-06 Score=84.24 Aligned_cols=228 Identities=15% Similarity=0.108 Sum_probs=123.4
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++....+....+++.|..|+++|.+++++.+....+|..+|..+++.. .+.. ..+++|.+.+++
T Consensus 101 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l--~~~~-------------~w~~~f~~~~~~ 165 (485)
T TIGR00711 101 GFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI--IENY-------------HWRWIFLINVPI 165 (485)
T ss_pred HhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh--ccCc-------------CceehhhhhhHH
Confidence 4555666778889999999999999999999999999999998887641 1111 235566666655
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhcc----ccccCCCCCCCCCCCCCccCCcccchh----hhh--
Q 017498 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAI----SKSKHDMPAAPNANGNKVESGHESDAN----LKH-- 197 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~----~~~-- 197 (370)
.+++.++..+..||++....+ ..|....... ....... ..+...+...+.... ...
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~---------~~d~~g~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 231 (485)
T TIGR00711 166 GIIVVVVAFFILPRDKPAASE---------NFDFLGLLLLSVGLGSLLYGL-----SEGPERGWFDSNEILILSITGLVA 231 (485)
T ss_pred HHHHHHHHHHHcCCccccccC---------CCcHHHHHHHHHHHHHHHHHH-----hhCCCCCCCCchHHHHHHHHHHHH
Confidence 555555555566764321111 0010000000 0000000 000000000000000 000
Q ss_pred -hcccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHH
Q 017498 198 -ISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 276 (370)
Q Consensus 198 -~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~ 276 (370)
.....++..+ +++... .++++ - +.++..++..++..++++....|...|..+ +++-+|. +
T Consensus 232 ~~~~~~~~~~~---~~~~~~-~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~s~~---------~ 292 (485)
T TIGR00711 232 IIAFVVWELTD---DNPLVD-LRLFK----Y-RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQ-VLGYTAL---------Q 292 (485)
T ss_pred HHHHHHHHHcC---CCCccC-HHHHc----C-CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH---------H
Confidence 0000000000 000000 11221 1 345666888888888888888877777655 4543332 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 017498 277 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTA 328 (370)
Q Consensus 277 ~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~ 328 (370)
.| +-+..+.+...+.+.+..++.+|+|+|++..++.++.+++++.+.
T Consensus 293 ----~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~ 339 (485)
T TIGR00711 293 ----AG-LHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRA 339 (485)
T ss_pred ----HH-HHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHh
Confidence 22 234456667777788888999999999999999888888877655
No 36
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.44 E-value=9.7e-06 Score=80.31 Aligned_cols=182 Identities=16% Similarity=0.211 Sum_probs=108.3
Q ss_pred ccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHH
Q 017498 51 NNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 130 (370)
Q Consensus 51 ~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~i 130 (370)
.........+++.|..|+++|.+++++......+|..+|..+++.. ... ...|++|.+.+++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~~-------------~gwr~~f~~~~~~~~~ 169 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL--SQE-------------FSWRYTFLLIAVFNIA 169 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH--hhh-------------ccHHHHHHHHHHHHHH
Confidence 3334455567889999999999999998888889988887776431 110 1357788877766555
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCC
Q 017498 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (370)
Q Consensus 131 tv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (370)
..+......||.+. +.+. +
T Consensus 170 ~~~~~~~~lp~~~~---~~~~-------------------------------------------------------~--- 188 (382)
T PRK10091 170 VLASIYFWVPDIRD---EAKG-------------------------------------------------------G--- 188 (382)
T ss_pred HHHHHHHhCCCCCc---cccc-------------------------------------------------------C---
Confidence 55544445666420 0000 0
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHH
Q 017498 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (370)
Q Consensus 211 ~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~s 290 (370)
.++-++.+++- ..+.+....+++..+.+.+..|...|..+ .++.+++ ...+-+..+.
T Consensus 189 ------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~--------------~~~~~~~~~~ 245 (382)
T PRK10091 189 ------LREQFHFLRSP--APWLIFAATMFGNAGVFAWFSYIKPYMMF-ISGFSET--------------SMTFIMMLVG 245 (382)
T ss_pred ------HHHHHHHhcCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH--------------HHHHHHHHHH
Confidence 01111222221 23344444455554554444444444433 3333321 1234455667
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+...+..++.+++.+|+|+|++...+.++.+++++.+.+..
T Consensus 246 ~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~ 286 (382)
T PRK10091 246 LGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG 286 (382)
T ss_pred HHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 77778888889999999999999999888888876655443
No 37
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.43 E-value=4.1e-06 Score=94.56 Aligned_cols=187 Identities=14% Similarity=0.050 Sum_probs=115.4
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
.......|++.|+.|++|+.+||++.+...++|.++|..+|+.. . ..+ ..+.+|.++++ +.+..
T Consensus 124 ~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l-~-~~~-------------~~~~~~~~~~~-~~~~~ 187 (1140)
T PRK06814 124 LFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA-T-ISG-------------NFVILVALLMG-IAVLG 187 (1140)
T ss_pred hhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH-H-hcc-------------ccHHHHHHHHH-HHHHH
Confidence 34445788999999999999999999999999999999999762 1 111 13455533333 33333
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCC
Q 017498 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (370)
Q Consensus 133 ~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (370)
.+..+.++|.+..+.+.. .. ..
T Consensus 188 ~~~~~~~~~~~~~~~~~~--------------------------------------------------------~~--~~ 209 (1140)
T PRK06814 188 WLASLFIPKTGNAAPDLK--------------------------------------------------------ID--RN 209 (1140)
T ss_pred HHHHhhCCCCCCCCCCCe--------------------------------------------------------ec--cc
Confidence 444555666532111000 00 00
Q ss_pred chhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHH
Q 017498 213 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (370)
Q Consensus 213 ~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv 292 (370)
......+-++.+++ .+.++.+.+..++.|+.+..++.+...|+.+ .++.++. ..| +.+..+++.
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~~-------------~~g-~~~~~~~~g 273 (1140)
T PRK06814 210 IIRSTITLLKYAKA-DKRIWLAILGISWFWLVGAVVLSQLPLLAKE-TLGGDEN-------------VAT-LFLAVFSVG 273 (1140)
T ss_pred hHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HcCCchH-------------HHH-HHHHHHHHH
Confidence 01112233344433 4568888888888888888888888777755 5554432 222 335566777
Q ss_pred HHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 293 ~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
..+.+++..++.++.+.+++...+.++.+++.+...+
T Consensus 274 ~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 310 (1140)
T PRK06814 274 VAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAF 310 (1140)
T ss_pred HHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHh
Confidence 7778888899987766666655566666555554444
No 38
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.41 E-value=1.3e-05 Score=82.80 Aligned_cols=194 Identities=15% Similarity=0.164 Sum_probs=121.1
Q ss_pred hhcccccchhhHHHHhcCCCchhh--------------------------hhHHHHHHHHHHhhhhhhhhcccccccccc
Q 017498 48 DLANNTVQGPARALLADLSGPDQR--------------------------NSANAIFCSWMAVGNILGFSAGASGSWHRW 101 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq--------------------------~~a~a~~s~~~glG~ilGy~~G~i~~~~~~ 101 (370)
.++-+..+...-|++.|+.+++++ ++-.++.--+..+|+++..++.... ..
T Consensus 137 ~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~-~~-- 213 (477)
T PF11700_consen 137 NVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL-VI-- 213 (477)
T ss_pred HHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH-HH--
Confidence 567788899999999999999877 4555444445555555554443220 00
Q ss_pred cccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCC
Q 017498 102 FPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNAN 181 (370)
Q Consensus 102 ~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 181 (370)
.+ +.. ..-....|+.+.++++..++..+.+.+.+||+|-++..+..
T Consensus 214 ~~---~~~-~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~------------------------------ 259 (477)
T PF11700_consen 214 SP---GST-ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG------------------------------ 259 (477)
T ss_pred cC---CCc-cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc------------------------------
Confidence 00 000 00123579999999999999999999999998542111000
Q ss_pred CCCccCCcccchhhhhhcccccccCCCCCCCchhhHHHHH---HHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccc
Q 017498 182 GNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLL---TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (370)
Q Consensus 182 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge 258 (370)
+ ......+++++ |.+++.| ++.+.++..||-=-|..+...+.+.|..+
T Consensus 260 -------------------------~---~~~~~g~~~l~~t~k~~~~~~-~~~~fLia~~l~~dg~~ti~~~~~i~a~~ 310 (477)
T PF11700_consen 260 -------------------------S---SYLRFGFKRLWRTFKEIRKLR-QLFLFLIAYFLYSDGVNTIISFAGIYATE 310 (477)
T ss_pred -------------------------h---hHHHHHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 11123455554 4444554 44445555555556888888888888765
Q ss_pred eeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCch--HHHHHHHHHHHH
Q 017498 259 EVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR--LVWAISNFIVFA 322 (370)
Q Consensus 259 ~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r--~v~~~s~~i~a~ 322 (370)
+++=++. ....+++ +-.+++.+.+++.+++.||+|.| ++..++.++..+
T Consensus 311 -~lg~s~~-------------~l~~~~l-~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~ 361 (477)
T PF11700_consen 311 -VLGMSTT-------------QLIVFGL-VVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWII 361 (477)
T ss_pred -hcCcCHH-------------HHHHHHH-HHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 4443221 2334444 44567888889999999999999 888877776633
No 39
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.39 E-value=1.4e-05 Score=79.06 Aligned_cols=185 Identities=12% Similarity=0.072 Sum_probs=108.8
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
..+..+....+++.|. +++++++++....+..+|.++|-.+|+.. ...+ ..+..|.+.++..+
T Consensus 107 ~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l--~~~~-------------g~~~~f~~~~~~~~ 169 (382)
T PRK11128 107 FFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKL--VSWF-------------GEQAILWILTAGVA 169 (382)
T ss_pred HHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHH--HHHc-------------ChhHHHHHHHHHHH
Confidence 3445555677788876 45567778888888888888888887651 1111 13455665555444
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCC
Q 017498 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (370)
Q Consensus 130 itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (370)
+..++. +..||++.+ ++++ ++ .
T Consensus 170 ~~~~~~-~~~~~~~~~--~~~~---------------------------------------------------~~--~-- 191 (382)
T PRK11128 170 SMLLGQ-LLRPTIMPQ--GESR---------------------------------------------------QQ--E-- 191 (382)
T ss_pred HHHHHH-HccCCCCCc--cccc---------------------------------------------------cc--c--
Confidence 444332 233443111 0000 00 0
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHH
Q 017498 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 289 (370)
Q Consensus 210 ~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~ 289 (370)
......+++++|. |.++.+++..++.+.+...+..|...|..| ++.+++ ..|.. +.+.
T Consensus 192 -~~~~~~~~~i~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~g~s~~-------------~~g~~-~~~~ 249 (382)
T PRK11128 192 -SAGWPAWKALLKE-----PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA--AGYSAS-------------TIGYL-WSLG 249 (382)
T ss_pred -ccccchHHHHHcC-----hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH--CCCCHh-------------HHHHH-HHHH
Confidence 0001234444443 567778888888888887777777777743 332221 22222 2244
Q ss_pred HHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 290 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 290 siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+...+..++.+++.+|+++|++..++.++.+++++...+.+
T Consensus 250 ~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T PRK11128 250 VVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455556667788999999999999889888888876665544
No 40
>TIGR00898 2A0119 cation transport protein.
Probab=98.38 E-value=1.1e-05 Score=82.75 Aligned_cols=78 Identities=15% Similarity=0.129 Sum_probs=56.5
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
.-++........-+++.|..|+++|.++.++.+...++|.+++..+++.. .+.|..|.+.++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~wr~~~~~~~i 251 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI------------------PDWRWLQLAVSL 251 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHHHHHHH
Confidence 34566667788899999999999999999999888888888887776431 024566666665
Q ss_pred HHHHHhhheeeEeeccC
Q 017498 127 FLTLCALVTIYFADEVP 143 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~p 143 (370)
..++..+.. +.+||.|
T Consensus 252 ~~~~~~~~~-~~~~esp 267 (505)
T TIGR00898 252 PTFLFFLLS-WFVPESP 267 (505)
T ss_pred HHHHHHHHH-HhcCCCh
Confidence 555554443 6678864
No 41
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.36 E-value=2.1e-05 Score=76.99 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=55.9
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
++.........+++.|..|+++|.+++++.....++|.++|..++... .+. . +...+.+|.++++..
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l--~~~---~--------~~~w~~~f~~~~~~~ 178 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV--VPV---W--------GDGWRALFFISILPI 178 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH--HHh---c--------CccHHHHHHHHHHHH
Confidence 444556677889999999999999999999999999999998776541 111 1 113577787776655
Q ss_pred HHHhhheeeEeecc
Q 017498 129 TLCALVTIYFADEV 142 (370)
Q Consensus 129 ~itv~~T~~~v~E~ 142 (370)
+++.. .....||.
T Consensus 179 ~~~~~-~~~~~~~~ 191 (405)
T TIGR00891 179 IFALW-LRKNIPEA 191 (405)
T ss_pred HHHHH-HHHhCCCC
Confidence 55543 33455664
No 42
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.32 E-value=3.7e-05 Score=76.85 Aligned_cols=80 Identities=16% Similarity=0.170 Sum_probs=55.9
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
.++....+....+++.|..|+++|++++++.....++|.++|-.+++. ..+.+ ..|++|.+.+++
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~--l~~~~-------------gw~~~f~~~~~l 183 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSF--LGELI-------------GWRNVFNAAAVM 183 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhc-------------CHHHHHHHHHHH
Confidence 445555667778899999999999999999999999999999888865 11111 246677776655
Q ss_pred HHHHhhheeeEeecc
Q 017498 128 LTLCALVTIYFADEV 142 (370)
Q Consensus 128 l~itv~~T~~~v~E~ 142 (370)
.+++.++.....||+
T Consensus 184 ~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 184 GVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHHHHHHHCCCC
Confidence 555544433344553
No 43
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.26 E-value=6e-05 Score=76.18 Aligned_cols=181 Identities=10% Similarity=0.127 Sum_probs=105.0
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhccc-ccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA-SGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~-i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
.+.+.-+++.|..|+++|.+++++.....++|+.++..+.+ ..+.. ...|..|.+.+++.++..
T Consensus 135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------------~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWF---------------NDWHAALYFPAICAIIVA 199 (438)
T ss_pred chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHh---------------hhhHHHHHHHHHHHHHHH
Confidence 34567778899999999999999999999999888765432 21110 135778888777766666
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCC
Q 017498 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (370)
Q Consensus 133 ~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (370)
++..+.+||.|..+..++. . +.+.|. + + ..+++.+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-----~-----------~~~~~~-----~----------~---------~~~~~~~~---- 235 (438)
T TIGR00712 200 LFAFAMMRDTPQSCGLPPI-----E-----------EYRNDY-----P----------D---------DYNEKAEQ---- 235 (438)
T ss_pred HHHHHhccCCHHhcCCCCc-----h-----------hccccc-----c----------c---------cccccccc----
Confidence 6666777886432110000 0 000000 0 0 00000000
Q ss_pred chhhHHHHH-HHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHH
Q 017498 213 PGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (370)
Q Consensus 213 ~~~~~~~l~-~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~si 291 (370)
.. ..++.+ +.+. -.+.++.+++..++...+++.+..|.+.|..+ +++-++. .. .+.+..+++
T Consensus 236 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~-------------~~-~~~~~~~~~ 298 (438)
T TIGR00712 236 EL-TAKEIFMQYVL-PNKLLWYIAIANVFVYLLRYGVLDWSPTYLKE-VKHFALD-------------KS-SWAYFLYEY 298 (438)
T ss_pred cc-chHHHHHHHHc-cCchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-ccCCChh-------------hH-HHHHHHHHH
Confidence 00 122322 2222 23577888888888888888888888888776 3332332 11 233455666
Q ss_pred HHHHHHHHHHHHHhhhCch
Q 017498 292 VLGVSSFLIEPMCRWIGSR 310 (370)
Q Consensus 292 v~~l~s~il~~l~~~ig~r 310 (370)
...+..++..++.+|++++
T Consensus 299 ~~~ig~~~~g~l~dr~~~~ 317 (438)
T TIGR00712 299 AGIPGTLLCGWMSDKVFKG 317 (438)
T ss_pred HHHHHHHHHHHHHHHhccC
Confidence 7777777788888888543
No 44
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.23 E-value=4.4e-05 Score=76.01 Aligned_cols=69 Identities=14% Similarity=0.260 Sum_probs=42.7
Q ss_pred HHHhcCCCchhhh--hHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheee
Q 017498 60 ALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIY 137 (370)
Q Consensus 60 Ali~D~~p~~qq~--~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~ 137 (370)
+++.|..++++|. ..+++......+|.++|-.+++. ....+ ..|..|.+.+++.++..++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~--l~~~~-------------gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 128 ALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYA--LAMGF-------------SFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHH--HHHhc-------------ChHHHHHHHHHHHHHHHHHHHh
Confidence 4556655555443 23456666778888888887754 11111 2567788777766666666666
Q ss_pred EeeccC
Q 017498 138 FADEVP 143 (370)
Q Consensus 138 ~v~E~p 143 (370)
..||.+
T Consensus 193 ~~~~~~ 198 (393)
T PRK15011 193 FLPSMR 198 (393)
T ss_pred hcCccC
Confidence 777753
No 45
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.23 E-value=3.9e-05 Score=76.05 Aligned_cols=87 Identities=11% Similarity=0.016 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
|..+.++++.++.+.++..+..|.+.|+.+ ++.++. ..|. .+.+..+...+..++.+++.+|+|
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--~g~s~~-------------~~g~-l~~~~~~~~i~~~~~~~~l~~r~g 268 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--AGISAS-------------ATGL-LWGIGVLAEIIIFAFSNKLFQNCS 268 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCHh-------------HHHH-HHHHHHHHHHHHHHHhHHHHhhCC
Confidence 667888899999999999999999988854 333332 2222 244566666666777889999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 017498 309 SRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.|++..++.++.++..+.+.+.+
T Consensus 269 ~~~~l~~~~~~~~~~~~~~~~~~ 291 (382)
T TIGR00902 269 ARDLLLISAIACVGRWAIIGAIE 291 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHh
Confidence 99999999999998888777655
No 46
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.23 E-value=0.00012 Score=73.62 Aligned_cols=73 Identities=18% Similarity=0.160 Sum_probs=54.0
Q ss_pred chhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 017498 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (370)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~ 134 (370)
.....+++.|..|++++.++.++.+...++|.++|-.+|+.. ...+ ..|+.|.+.+++.+++.+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l--~~~~-------------gw~~~f~~~~~~~~i~~~~ 186 (413)
T PRK15403 122 ATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL--MHFV-------------HWKVLFAIIAVMGLIAFVG 186 (413)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhc-------------CHHHHHHHHHHHHHHHHHH
Confidence 445678899999999999999999999999999998888651 1111 2577888777766666655
Q ss_pred eeeEeecc
Q 017498 135 TIYFADEV 142 (370)
Q Consensus 135 T~~~v~E~ 142 (370)
..+..||.
T Consensus 187 ~~~~lp~~ 194 (413)
T PRK15403 187 LLLAMPET 194 (413)
T ss_pred HHHhCCCC
Confidence 55566775
No 47
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.23 E-value=5.4e-05 Score=72.96 Aligned_cols=47 Identities=19% Similarity=0.170 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
-..++++...+.+++..++.+|+|+|+...++.++.+++++.+.+..
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T TIGR00890 245 AVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIP 291 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcc
Confidence 34567777778888889999999999999999998888887766543
No 48
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.21 E-value=9.3e-05 Score=74.10 Aligned_cols=78 Identities=18% Similarity=0.259 Sum_probs=55.9
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++....+.+..+++.|.+|+++|++++++.+....+|..+|-.+++.. . . ...+..|.+.+++
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l-~-~--------------~g~~~~f~~~~~~ 173 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL-L-Q--------------YDFRLVCATGAVL 173 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-H--------------hhHHHHHHHHHHH
Confidence 3343334455678999999999999999999999999999999888752 1 1 1356778877766
Q ss_pred HHHHhhheeeEeec
Q 017498 128 LTLCALVTIYFADE 141 (370)
Q Consensus 128 l~itv~~T~~~v~E 141 (370)
.+++.++..+..||
T Consensus 174 ~~~~~i~~~~~~~~ 187 (400)
T PRK11646 174 FVLAAAFNAWLLPA 187 (400)
T ss_pred HHHHHHHHHHhCCc
Confidence 66555444444555
No 49
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.19 E-value=4.6e-05 Score=77.28 Aligned_cols=86 Identities=10% Similarity=0.054 Sum_probs=58.4
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+......+..+++.|..|+++|.++.++.+....+|.++++.+++.. .....+.... ...-|++|.+.++..+
T Consensus 133 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~------~~gWr~~f~~~~~~~~ 205 (479)
T PRK10077 133 GVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFI-ARSGDASWLN------TDGWRYMFASEAIPAL 205 (479)
T ss_pred hHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccccc------cCChHHHHHHHHHHHH
Confidence 33445567889999999999999999999999999999998877541 1100000000 0146888888776666
Q ss_pred HHhhheeeEeeccC
Q 017498 130 LCALVTIYFADEVP 143 (370)
Q Consensus 130 itv~~T~~~v~E~p 143 (370)
+..+ ..+.+||.|
T Consensus 206 ~~~~-~~~~l~~s~ 218 (479)
T PRK10077 206 LFLM-LLYFVPETP 218 (479)
T ss_pred HHHH-HHHcCCCCc
Confidence 6554 356688864
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=98.17 E-value=7.8e-05 Score=75.84 Aligned_cols=85 Identities=12% Similarity=-0.052 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 017498 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (370)
Q Consensus 231 ~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r 310 (370)
++...+..++.-.+.+.+..|...|+-+++++-+|. ...+.+..+.+...+.+++..++.+|+|+|
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~--------------~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~ 325 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAG--------------FAANYLTGTMVCFFIGRFTGTWLISRFAPH 325 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 334445556655666656666666643334443332 224556777777788888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 017498 311 LVWAISNFIVFACMATTAI 329 (370)
Q Consensus 311 ~v~~~s~~i~a~~~~~~~~ 329 (370)
++...+.++.+++++...+
T Consensus 326 ~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 326 KVLAAYALIAMALCLISAF 344 (438)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9988888777766655443
No 51
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.14 E-value=9.5e-05 Score=76.05 Aligned_cols=87 Identities=13% Similarity=0.032 Sum_probs=53.2
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
++.-....+.-+++.|..|+++|.++.++.+....+|.++|..++... ...++ ... ...-.-|+.|.++++..
T Consensus 130 ~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~--~~~~~---~~~--~~~~gWR~~f~i~~~~~ 202 (490)
T PRK10642 130 FSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLI--STIVG---EAN--FLDWGWRIPFFIALPLG 202 (490)
T ss_pred hHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH--HHhcC---HHH--hcCccHHHHHHHHHHHH
Confidence 334445567788999999999999999988877777877776554321 00000 000 00013588898877655
Q ss_pred HHHhhheeeEeeccC
Q 017498 129 TLCALVTIYFADEVP 143 (370)
Q Consensus 129 ~itv~~T~~~v~E~p 143 (370)
+++..+ ....||.|
T Consensus 203 l~~~~~-~~~~~esp 216 (490)
T PRK10642 203 IIGLYL-RHALEETP 216 (490)
T ss_pred HHHHHH-HHcCCCCh
Confidence 544433 44677754
No 52
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.13 E-value=0.00015 Score=72.07 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=46.6
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
...-+++.|..|++++.+++++......+|..+|-.+++. +.+.. ..+..|.+.+++.+++.+..
T Consensus 120 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~--l~~~~-------------~w~~~~~~~~~~~~~~~~~~ 184 (406)
T PRK15402 120 AVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAA--LIHVL-------------PWRGMFVLFAALAALSFFGL 184 (406)
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcc-------------CccHHHHHHHHHHHHHHHHH
Confidence 4466788999999999999888877777788887776643 11111 23556666655555555544
Q ss_pred eeEeecc
Q 017498 136 IYFADEV 142 (370)
Q Consensus 136 ~~~v~E~ 142 (370)
.+..||+
T Consensus 185 ~~~~~~~ 191 (406)
T PRK15402 185 WRAMPET 191 (406)
T ss_pred HHhCCCC
Confidence 4445654
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.11 E-value=0.00013 Score=72.33 Aligned_cols=42 Identities=7% Similarity=-0.182 Sum_probs=35.2
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
......+++.|..|+++|.+++++.+....+|.++|..+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~ 170 (399)
T PRK05122 129 AGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVL 170 (399)
T ss_pred hcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHH
Confidence 445556788999999999999999998888898888888754
No 54
>PRK10504 putative transporter; Provisional
Probab=98.11 E-value=0.00012 Score=74.41 Aligned_cols=229 Identities=10% Similarity=0.028 Sum_probs=118.8
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+.........+++.|..|+++|.+++++......+|.++|..+++.. .+ . ...++.|.+.+.+..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l-~~-~-------------~gw~~~f~~~~~~~~ 175 (471)
T PRK10504 111 GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL-VE-Y-------------ASWHWIFLINIPVGI 175 (471)
T ss_pred hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-Hh-h-------------ccHHHHHHHHHHHHH
Confidence 33334456677899999999999999999999999999998877541 11 0 135778888776666
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchh-------hhhhc-cc
Q 017498 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN-------LKHIS-KK 201 (370)
Q Consensus 130 itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~-~~ 201 (370)
++.+++....||.+.++. +.|............-... ..++.+ ......... .-..+ ..
T Consensus 176 l~~~~~~~~~~~~~~~~~----------r~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (471)
T PRK10504 176 IGAIATLMLMPNYTMQTR----------RFDLSGFLLLAVGMATLTL--ALDGSK-GLGLSPLAIAGLVAVGVVALLLYL 242 (471)
T ss_pred HHHHHHHHhCCCccccCC----------CCChHHHHHHHHHHHHHHH--HHhcCC-cCCcchHHHHHHHHHHHHHHHHHH
Confidence 666666665555432111 1111000000000000000 000000 000000000 00000 00
Q ss_pred ccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHH
Q 017498 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (370)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~ 281 (370)
.+++ +. .++...+ ++++ .|.++.++...++.+++......+.+.|..+ +++.++. +.
T Consensus 243 ~~~~-~~--~~~~~~~-~l~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~---------~~---- 299 (471)
T PRK10504 243 LHAR-NN--NRALFSL-KLFR-----TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-GLGFSPF---------HA---- 299 (471)
T ss_pred HHHh-cC--CCCccCH-HHhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH---------HH----
Confidence 0000 00 0011111 1222 2567778888888888876555555545433 3332221 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 282 Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.+-+..+.+...+...+.+++.+|+|+|+++..+.++.+++.+.+.+.
T Consensus 300 -g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 300 -GLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhc
Confidence 233445555566666788999999999999999988887776665544
No 55
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.10 E-value=0.00013 Score=72.73 Aligned_cols=46 Identities=15% Similarity=0.096 Sum_probs=38.0
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhccc
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 94 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~ 94 (370)
++.........+++.|..|+++|.+++++.....++|.+++..++.
T Consensus 118 ~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~ 163 (426)
T PRK12307 118 MGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMP 163 (426)
T ss_pred HHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHH
Confidence 4445566678899999999999999999999999999999876553
No 56
>PRK12382 putative transporter; Provisional
Probab=98.10 E-value=0.00011 Score=72.76 Aligned_cols=41 Identities=17% Similarity=-0.016 Sum_probs=33.9
Q ss_pred chhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
.....+++.|..|+++|.++.++.+....+|.++|-.+++.
T Consensus 130 ~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 130 LTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHH
Confidence 34456788999999999999999988888888888777654
No 57
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.09 E-value=0.00014 Score=73.12 Aligned_cols=186 Identities=20% Similarity=0.235 Sum_probs=130.2
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++.-....-.-++..|++||+||.+|-++...=..+..++|-=+|.. ..++++ -|..|.+.+.+
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~--ig~~~G-------------WR~~F~~ia~l 176 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTF--LGQLFG-------------WRATFLAIAVL 176 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHH--HHHHhh-------------HHHHHHHHHHH
Confidence 355555666677889999999999999988776666666666444432 111111 26677777766
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCC
Q 017498 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
=++++++-....| | .+..+ +
T Consensus 177 ~ll~~~~~~~~lP--~---~~~~~-------------------------------------------------------~ 196 (394)
T COG2814 177 ALLALLLLWKLLP--P---SEISG-------------------------------------------------------S 196 (394)
T ss_pred HHHHHHHHHHhCC--C---ccCCC-------------------------------------------------------C
Confidence 6666666666666 1 11000 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHH
Q 017498 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (370)
Q Consensus 208 ~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~ 287 (370)
+...+++.++.++ .+.++...++.++.-.|.|....|..+|..+ +.+-+++ .=++.|+
T Consensus 197 -----~~~~~~~~~~~l~--~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-v~g~s~~--------------~vs~~Ll 254 (394)
T COG2814 197 -----LPGPLRTLLRLLR--RPGVLLGLLATFLFMTGHFALYTYIRPFLES-VAGFSVS--------------AVSLVLL 254 (394)
T ss_pred -----CCcchhHHHHHhc--CchHHHHHHHHHHHHcchhhhHHhHHHHHHH-ccCCCHh--------------HHHHHHH
Confidence 0112333344433 3567888889999999999999999999987 6554432 2278899
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+|.+...+-+.+-.++.+| +.|+.-....++.++.++...+..
T Consensus 255 ~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~ 297 (394)
T COG2814 255 AFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTG 297 (394)
T ss_pred HHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999 999999999999999888866665
No 58
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.09 E-value=0.00027 Score=68.65 Aligned_cols=209 Identities=11% Similarity=0.030 Sum_probs=117.5
Q ss_pred HHHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccc-hhhhcccchh
Q 017498 39 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTS-RACCAACGNL 117 (370)
Q Consensus 39 l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~-~~~~~~~~q~ 117 (370)
...+++.++-.++-.+|.-+-+|+.|+-|+|++.+..++...+.++|.++|-++++..-.......... ..-...-.+.
T Consensus 12 ~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~ 91 (310)
T TIGR01272 12 LFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKV 91 (310)
T ss_pred HHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHH
Confidence 445566667777777788888899999999999999999999999999999988864100000000000 0000001256
Q ss_pred HHHHH-HHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhh
Q 017498 118 KAAFL-VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLK 196 (370)
Q Consensus 118 k~~f~-i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 196 (370)
+..|. +++++.++.+++.....||... +++++
T Consensus 92 ~~~yl~ia~~~~~~~i~~~~~~~p~~~~--~~~~~--------------------------------------------- 124 (310)
T TIGR01272 92 HTPYLLLAGALAVLAIIFAFLPLPELQE--ADVAR--------------------------------------------- 124 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCc--ccccc---------------------------------------------
Confidence 77777 4555555555555445555311 11000
Q ss_pred hhcccccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccce-eecCCCCCCchhhHhH
Q 017498 197 HISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKFY 275 (370)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~-vf~gdp~a~s~~~~~Y 275 (370)
..++ +. . ..+++++ -| ..+...+.+|+-=-+..++.-+...|+.+. .++-++
T Consensus 125 ----~~~~--~~--~----~~~~~~~----~~-~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~---------- 177 (310)
T TIGR01272 125 ----VSSG--DT--T----QKTSAFQ----FT-HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPE---------- 177 (310)
T ss_pred ----cccc--cc--c----chhhHHh----hH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCH----------
Confidence 0000 00 0 0011122 12 233334444443335667777777777542 233232
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 017498 276 DQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMA 325 (370)
Q Consensus 276 ~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~ 325 (370)
...++....+.....+-.++..++.+|+|.|++..++.++.+++++
T Consensus 178 ----~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~ 223 (310)
T TIGR01272 178 ----DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSI 223 (310)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 2223445666666667778888999999988877777666655553
No 59
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.09 E-value=0.00026 Score=71.54 Aligned_cols=75 Identities=15% Similarity=0.039 Sum_probs=53.2
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
...+.-+++.|..|+++|.++.++.....++|+++|..+++.. .+ . ...|..|.+.+++.++..+
T Consensus 128 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l-~~-~-------------~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 128 GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI-AL-H-------------YGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-c-------------ccHHHHHHHHHHHHHHHHH
Confidence 3456778999999999999999999999999999997765431 11 1 1357778776655444444
Q ss_pred heeeEeeccC
Q 017498 134 VTIYFADEVP 143 (370)
Q Consensus 134 ~T~~~v~E~p 143 (370)
+..+..||.|
T Consensus 193 ~~~~~~~~~p 202 (434)
T PRK11663 193 FLCWRLRDKP 202 (434)
T ss_pred HHHHHcCCCH
Confidence 4445667765
No 60
>PRK10054 putative transporter; Provisional
Probab=98.07 E-value=3.5e-05 Score=77.00 Aligned_cols=69 Identities=12% Similarity=0.147 Sum_probs=50.2
Q ss_pred hHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheee
Q 017498 58 ARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIY 137 (370)
Q Consensus 58 ~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~ 137 (370)
..+++.|..|+++|.+++++......+|.++|..+++.. .+ . ..+..|.+.+++.++++++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l--~~-~-------------g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 117 LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL--VM-Q-------------SINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-h-------------ccCcHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999999999999999998887652 11 1 1345677776666666554444
Q ss_pred Eeecc
Q 017498 138 FADEV 142 (370)
Q Consensus 138 ~v~E~ 142 (370)
.+||.
T Consensus 181 ~~~~~ 185 (395)
T PRK10054 181 WVQRS 185 (395)
T ss_pred HHhcc
Confidence 45554
No 61
>PRK09952 shikimate transporter; Provisional
Probab=98.03 E-value=0.00019 Score=72.77 Aligned_cols=197 Identities=13% Similarity=0.054 Sum_probs=103.1
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
.++........-+++.|..|+++|.+..+..+...++|.+++..+... +...++ ... .....-|..|.++++.
T Consensus 136 G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~--l~~~~~---~~~--~~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 136 GFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSL--ISMMTT---DEQ--FLSWGWRIPFLFSIVL 208 (438)
T ss_pred HhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HHH--hhccChHHHHHHHHHH
Confidence 444444555667899999999999988888888888888888655432 111110 000 0001357788887765
Q ss_pred HHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCC
Q 017498 128 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 207 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (370)
.++... .-...||.|-.. +.+ .+.+ +
T Consensus 209 ~l~~~~-l~~~~~es~~~~-~~~---------------------------------------------------~~~~-~ 234 (438)
T PRK09952 209 VLIALW-VRNGMEESAEFE-QQQ---------------------------------------------------HEQA-A 234 (438)
T ss_pred HHHHHH-HHHhCCCChhHH-HHH---------------------------------------------------hhcc-c
Confidence 444322 112334432100 000 0000 0
Q ss_pred CCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHH
Q 017498 208 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 287 (370)
Q Consensus 208 ~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~ 287 (370)
. +.... . .+.+++-|+....+....++.+++++.+..|...|..+ .++-+++ .....++
T Consensus 235 ~--~~~~~-~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~-~~g~s~~-------------~~~~~~~- 293 (438)
T PRK09952 235 A--KKRIP-V---IEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQ-NLGLPRE-------------LFLNIGL- 293 (438)
T ss_pred c--cccCC-H---HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HHHHHHH-
Confidence 0 00011 1 12233345555555445566566666666666666644 2322211 1112222
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMAT 326 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~ 326 (370)
+..++..+...+..++.+|+|+|++...+.++.+++++.
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~ 332 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFP 332 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 334455666677889999999999988887766555443
No 62
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.02 E-value=0.00057 Score=68.21 Aligned_cols=69 Identities=10% Similarity=-0.091 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
|.++.+++..++.-.+.+.+..|...|+.+ ++-++. ..| +-+..+.+...+.+++..++.+|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~~~-~~~~~~~~~~~ig~~~~g~l~dr~~ 285 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAE--LGFSTS-------------EWL-QIWGTFFFTNIVFNVIFGIVGDKLG 285 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh-------------HHH-HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456666777777767777888888888744 433332 111 2233455666777778889999999
Q ss_pred chHHH
Q 017498 309 SRLVW 313 (370)
Q Consensus 309 ~r~v~ 313 (370)
+|+..
T Consensus 286 ~~~~~ 290 (402)
T TIGR00897 286 WMNTV 290 (402)
T ss_pred chhHH
Confidence 88765
No 63
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.99 E-value=0.0002 Score=77.79 Aligned_cols=94 Identities=10% Similarity=0.122 Sum_probs=60.3
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++........-+++.|.+|++.|+++.++...+..+|++++..+++.. ++. +++............-|++|.+.++.
T Consensus 266 G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~i-l~~-~G~~~~~g~~~~~~gWR~l~~i~~lp 343 (742)
T TIGR01299 266 GFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAI-IPH-YGWSFQMGSAYQFHSWRVFVIVCAFP 343 (742)
T ss_pred HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHh-ccchhccccccccccHHHHHHHHHHH
Confidence 4555556677788999999999999999999999999999988766431 111 11100000000012467888887766
Q ss_pred HHHHhhheeeEeeccCC
Q 017498 128 LTLCALVTIYFADEVPL 144 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~ 144 (370)
.+++++ ..+.+||.|-
T Consensus 344 ~ll~ll-~~~~lPESPr 359 (742)
T TIGR01299 344 CVFAIG-ALTFMPESPR 359 (742)
T ss_pred HHHHHH-HHHHcCCCHH
Confidence 555543 4567799753
No 64
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.98 E-value=0.00054 Score=69.60 Aligned_cols=178 Identities=12% Similarity=0.162 Sum_probs=97.6
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhh-hhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGN-ILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~-ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
...+.-+.+.|..|+++|.++.++.+...++|+ +.+.+++....+. ...+..|.+.+++.++..
T Consensus 137 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------------~gw~~~f~i~~~~~~~~~ 201 (452)
T PRK11273 137 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF---------------NDWHAALYMPAFAAILVA 201 (452)
T ss_pred cchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh---------------ccHHHHHHHHHHHHHHHH
Confidence 344567788999999999999999888888876 4555543221111 124677877666666655
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCC
Q 017498 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 212 (370)
Q Consensus 133 ~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (370)
++..+..||.|-....++. ++. +.+.. + ..+++ +. +
T Consensus 202 ~l~~~~~~~~~~~~~~~~~---~~~-------------~~~~~--------------------~----~~~~~-~~--~- 237 (452)
T PRK11273 202 LFAFAMMRDTPQSCGLPPI---EEY-------------KNDYP--------------------D----DYNEK-HE--Q- 237 (452)
T ss_pred HHHHHHccCCHhhcCCCCh---hhh-------------hhccc--------------------c----ccccc-cC--C-
Confidence 6666677886421100000 000 00000 0 00000 00 0
Q ss_pred chhhHHHHH-HHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHH
Q 017498 213 PGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (370)
Q Consensus 213 ~~~~~~~l~-~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~si 291 (370)
....++.+ +.+.+ .+.++.+++..++....+..+..|.+.|.-+ .++-++. + . .+...++++
T Consensus 238 -~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~-~~g~s~~---------~----~-~~~~~~~~~ 300 (452)
T PRK11273 238 -ELTAKQIFMQYVLP-NKLLWYIAIANVFVYLLRYGILDWSPTYLKE-VKHFALD---------K----S-SWAYFLYEY 300 (452)
T ss_pred -CccHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH---------H----H-HHHHHHHHH
Confidence 01123332 22222 3668888888888888888888888888765 3332221 1 1 223345555
Q ss_pred HHHHHHHHHHHHHhhh
Q 017498 292 VLGVSSFLIEPMCRWI 307 (370)
Q Consensus 292 v~~l~s~il~~l~~~i 307 (370)
...+..++...+.+|+
T Consensus 301 ~~~~g~~~~G~l~dr~ 316 (452)
T PRK11273 301 AGIPGTLLCGWMSDKV 316 (452)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5566667777888777
No 65
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.96 E-value=0.00021 Score=72.57 Aligned_cols=153 Identities=12% Similarity=0.120 Sum_probs=87.5
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+.-.......+++.|..|+++|.+++++......+|.++|..+++...+. .. ..+..|.+.++..+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~-~~-------------gw~~~f~i~~~~~~ 209 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCES-WG-------------GWPMIFYVFGIVGC 209 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cC-------------CCCeehhhhhHHHH
Confidence 33344456678999999999999999999999999999998887541111 00 23555666555544
Q ss_pred HHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCC
Q 017498 130 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 209 (370)
Q Consensus 130 itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (370)
+..++.....+|.|-.....+ +.+.+..++. .+++.++
T Consensus 210 ~~~~~~~~~~~~~p~~~~~~~----------~~~~~~i~~~-------------------------------~~~~~~~- 247 (465)
T TIGR00894 210 AWSLLWFVFPADDPSIHPCIS----------KFEKKYINSS-------------------------------LQGQKGS- 247 (465)
T ss_pred HHHHHHHHHhcCCcccCCCCC----------HHHHHHHHhh-------------------------------cccccCC-
Confidence 444444444566542111000 0000000000 0000000
Q ss_pred CCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCC
Q 017498 210 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDP 265 (370)
Q Consensus 210 ~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp 265 (370)
......++++++. +.++.+++.+++...+++.+..|..+|..+ .++-++
T Consensus 248 -~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~ 296 (465)
T TIGR00894 248 -TRQSLPIKAIPKS-----LPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVSG 296 (465)
T ss_pred -CCCCCCHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCh
Confidence 0011224444433 568899999999999999889999988866 555443
No 66
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.94 E-value=0.00067 Score=68.18 Aligned_cols=207 Identities=12% Similarity=0.077 Sum_probs=111.6
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhccccc-ccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~-~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
.....-+++.|..|+++|.++.++.+...++|+++|..+++.. +.+... + ...-|++|.+.++..++..
T Consensus 113 ~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~----~------~~gwr~~f~~~~~~~l~~~ 182 (412)
T TIGR02332 113 FLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM----A------LKGWQWLFLLEGFPSVILG 182 (412)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC----C------ccchhHHHHHHHHHHHHHH
Confidence 3334456889999999999999999999999999999887541 100000 0 0135788888766655555
Q ss_pred hheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccc-cCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCC
Q 017498 133 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKS-KHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 211 (370)
Q Consensus 133 ~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (370)
.+..+.+||.|-......+ ...+...+. +.+. ...++.++...
T Consensus 183 ~~~~~~~~~~p~~~~~l~~----------~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 226 (412)
T TIGR02332 183 VMTWFWLDDSPDKAKWLDE----------EDKKALKEMIDNDQ--------------------------LTLEQPEGAFA 226 (412)
T ss_pred HHHhhccCCCcccCCCCCH----------HHHHHHHHHHHhcc--------------------------ccccccccccc
Confidence 5566677887532110000 000000000 0000 00000000000
Q ss_pred CchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHH
Q 017498 212 GPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV 291 (370)
Q Consensus 212 ~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~si 291 (370)
......++.++.+++ +.++..+++.++...+++.+..|...|..+ ...+... ...|.. .....+
T Consensus 227 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~~~~s~------------~~~~~~-~~~~~l 290 (412)
T TIGR02332 227 HAAMPQRSMLREIFT--PAIMLYTLAYFCLTNTLSAINIWTPQILQS-FNQGSSN------------IMIGLL-AAIPQF 290 (412)
T ss_pred cccccHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCCcH------------HHhHHH-hhHHHH
Confidence 001112344566553 447888888888888888888888888855 2111110 122222 345555
Q ss_pred HHHHHHHHHHHHHhhhCchHH-HHHHHHHHHH
Q 017498 292 VLGVSSFLIEPMCRWIGSRLV-WAISNFIVFA 322 (370)
Q Consensus 292 v~~l~s~il~~l~~~ig~r~v-~~~s~~i~a~ 322 (370)
...+..++..++.+|+++|+. .....++.++
T Consensus 291 ~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~ 322 (412)
T TIGR02332 291 CTIFGMIWWSRHSDRLKERKHHTALPYLFAAA 322 (412)
T ss_pred HHHHHHHHHHHHhcccCccHHHHHHHHHHHHH
Confidence 566667777888888887664 3334334333
No 67
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=97.93 E-value=0.00095 Score=66.01 Aligned_cols=72 Identities=21% Similarity=0.183 Sum_probs=47.1
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
.-.++++.|..+++++.+++++.+....+|..+|..+++.. .+.. ..|..|.+.+++.++...+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l--~~~~-------------g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 115 VMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLL--TTLF-------------GWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc-------------ChHHHHHHHHHHHHHHHHHH
Confidence 34567888999999999999998888888888888777541 1110 24566666554444433333
Q ss_pred eeEeecc
Q 017498 136 IYFADEV 142 (370)
Q Consensus 136 ~~~v~E~ 142 (370)
.+..||.
T Consensus 180 ~~~~~~~ 186 (394)
T PRK11652 180 ARWMPET 186 (394)
T ss_pred HHhCCcc
Confidence 4456775
No 68
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.92 E-value=0.00047 Score=68.62 Aligned_cols=124 Identities=11% Similarity=0.082 Sum_probs=81.7
Q ss_pred hhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 017498 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (370)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~ 136 (370)
+.-+.+.|..|+++|.++.++......+|++++..++... ... ..-|..|.+.+++-++..++..
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l--~~~-------------~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI--YTA-------------GGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHc-------------cchHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999999999999999999999888652 111 1246778775544444444455
Q ss_pred eEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchhh
Q 017498 137 YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAV 216 (370)
Q Consensus 137 ~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (370)
+.+||.|....+ . . +. .+..+.
T Consensus 163 ~~lp~~p~~~~~--~----------------------------------------------------~--~~--~~~~~~ 184 (368)
T TIGR00903 163 AALPALPFQAAE--G----------------------------------------------------F--GF--KDAVKE 184 (368)
T ss_pred HHcCCCCCCCCC--C----------------------------------------------------c--ch--HHHHHH
Confidence 567886421100 0 0 00 000112
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccc
Q 017498 217 LVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (370)
Q Consensus 217 ~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge 258 (370)
++++++ .|.++.++++.++...+++.+..+..+|.-+
T Consensus 185 ~~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~ 221 (368)
T TIGR00903 185 FGALAG-----RKDLWIIGAILGFGVALFDNLAIWLEAALRP 221 (368)
T ss_pred HHHHHc-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333 3778999999999999999998888888743
No 69
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.91 E-value=0.00089 Score=67.54 Aligned_cols=76 Identities=7% Similarity=0.078 Sum_probs=46.8
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+.-.......+++.|..|+++|.++.++.......|.+++..++.+ .....+ +... ....-|..|.++++..+
T Consensus 137 g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~---~~~~--~~~gWr~~F~i~~~~~l 209 (432)
T PRK10406 137 SVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVV--LQQTLE---DAEL--REWGWRIPFALGAVLAV 209 (432)
T ss_pred hhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHH--HHHhCC---HHHH--hccchHHHHHHHHHHHH
Confidence 3334455677899999999999999888877777777777665433 111110 0000 00135888988776655
Q ss_pred HHh
Q 017498 130 LCA 132 (370)
Q Consensus 130 itv 132 (370)
+..
T Consensus 210 l~~ 212 (432)
T PRK10406 210 VAL 212 (432)
T ss_pred HHH
Confidence 543
No 70
>PRK15075 citrate-proton symporter; Provisional
Probab=97.91 E-value=0.0005 Score=69.41 Aligned_cols=40 Identities=15% Similarity=0.186 Sum_probs=32.6
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
.+..+++.|..|+++|.++.++.+....+|..+|..+|..
T Consensus 136 ~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~ 175 (434)
T PRK15075 136 GGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYL 175 (434)
T ss_pred HHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577899999999999999999888877777776666643
No 71
>PRK11043 putative transporter; Provisional
Probab=97.90 E-value=0.00092 Score=66.29 Aligned_cols=72 Identities=19% Similarity=0.049 Sum_probs=46.8
Q ss_pred chhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 017498 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (370)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~ 134 (370)
.....+++.|..|++++.++++......++|+.+|..+++.. .+ . ...+..|.+..++.++..++
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l-~~-~-------------~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 112 AVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL-LN-H-------------FGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-c-------------CChHHHHHHHHHHHHHHHHH
Confidence 334567899999999888888888888888888888777541 11 1 12466676665555555444
Q ss_pred eeeEeecc
Q 017498 135 TIYFADEV 142 (370)
Q Consensus 135 T~~~v~E~ 142 (370)
.. ..+|+
T Consensus 177 ~~-~~~~~ 183 (401)
T PRK11043 177 TL-RLKPS 183 (401)
T ss_pred HH-HcCCC
Confidence 33 33443
No 72
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=97.89 E-value=0.00041 Score=68.83 Aligned_cols=89 Identities=9% Similarity=0.099 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
|.++.+++..++.+..+..+..+...|..+ .++ ++..+ .. ..| +...+.+++..+..+..+++.+|+|
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~-~~~-~~~~~-----~~----~~g-~~~~~~~i~~~~~~~~~g~l~~r~g 282 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTS-FFA-TPQQG-----TR----VFG-YVTTMGELLNALIMFCAPLIINRIG 282 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcc-ccccc-----hH----HHH-HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456677777777666555444444444433 221 11100 00 122 2233455666667778899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+|++..++.++.++.+....+
T Consensus 283 ~~~~l~~~~~l~~l~~~~~~~ 303 (396)
T TIGR00882 283 AKNALLIAGTIMSVRIIGSSF 303 (396)
T ss_pred cchhHHHHHHHHHHHHHHHHh
Confidence 999999998888876655443
No 73
>PRK03699 putative transporter; Provisional
Probab=97.86 E-value=0.00058 Score=67.87 Aligned_cols=84 Identities=11% Similarity=0.104 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.++.+++..++.-++.+.+..|...|+.| .++-++. +.| +-...+.+...+..++..++.+|++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~~---------~~~-----~~~~~~~~~~~ig~~~~g~l~dr~~ 269 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQK-KFGMSLE---------DAG-----NLVSNFWMAYMVGMWIFSFIVRFFD 269 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChH---------Hhh-----HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455666777777666777777777777755 4554442 111 1223444455666677788899999
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATT 327 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~ 327 (370)
+|++......+.+++++..
T Consensus 270 ~~~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 270 LQRILTVLAGLALVLMYLF 288 (394)
T ss_pred hhhHHHHHHHHHHHHHHHH
Confidence 9988887776655554443
No 74
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.80 E-value=0.00076 Score=67.22 Aligned_cols=85 Identities=9% Similarity=0.084 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~ 309 (370)
..+.+++..++.-++++.+..|...|+.+ ++-++. ..| .-+.++.+...+.+++..++.+|+++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~s~~-------------~ag-~~~~~~~i~~i~g~~~~g~l~~r~~~ 269 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE--IGASAQ-------------YSG-SLLALMTLGQAAGALLMPAMARHQDR 269 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChh-------------hhh-HHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 34566666666777777777777777754 332332 112 23456777777788888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 017498 310 RLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~ 330 (370)
|++...+.++.+++++.+.+.
T Consensus 270 ~~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 270 RKLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHc
Confidence 999998888777776655433
No 75
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.79 E-value=0.00085 Score=69.18 Aligned_cols=95 Identities=9% Similarity=-0.063 Sum_probs=60.7
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhccccccc--ccccccccchh----hh---cccchhH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSW--HRWFPFLTSRA----CC---AACGNLK 118 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~--~~~~~~~~~~~----~~---~~~~q~k 118 (370)
-++......+.-+|+.+.+|+++|.++.++.+.+..+|.++|..++..... .+..... +.. +. .....-|
T Consensus 126 G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~WR 204 (502)
T TIGR00887 126 GVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAA-ADEASCTGSCVPAVDYMWR 204 (502)
T ss_pred HHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc-cccccccccccchhcccHH
Confidence 455555667788999999999999999999999999999999888753111 0000000 000 00 0011478
Q ss_pred HHHHHHHHHHHHHhhheeeEeeccCC
Q 017498 119 AAFLVAVVFLTLCALVTIYFADEVPL 144 (370)
Q Consensus 119 ~~f~i~ai~l~itv~~T~~~v~E~p~ 144 (370)
.+|.++++..++..+ ..+.+||.|-
T Consensus 205 ~~~~~~~ip~~i~~~-~~~~lpESpr 229 (502)
T TIGR00887 205 ILIGFGAVPALLALY-FRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHHH-HHHhCCCCHH
Confidence 888777665544433 3567899764
No 76
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.75 E-value=0.0015 Score=65.85 Aligned_cols=47 Identities=11% Similarity=0.147 Sum_probs=39.3
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++.-..+.+.-+++.+..|++++.+..++.+...++|+.+|..++..
T Consensus 106 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 106 AGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred hhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777889899999999999999999999999999888754
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.75 E-value=0.0016 Score=63.52 Aligned_cols=86 Identities=13% Similarity=0.133 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI- 307 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~i- 307 (370)
+.++.+++..++.+.+++.+..|...|+.+ ++.++. ....-+..+.+...+..++..++.+|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~~~--------------~~g~~~~~~~~~~i~~~~~~g~l~dr~~ 260 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGASAA--------------TAGSLLALMQLAQAASALLIPALARRVK 260 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH--------------HHHHHHHHHHHHHHHHHHhHHHHHhhhc
Confidence 455667777777777777777777777643 333321 112334456667777788888999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHH
Q 017498 308 GSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 308 g~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
++|++..++.++.+++++...+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~ 283 (355)
T TIGR00896 261 DQRGIVAVLAVLQLVGLCGLLFA 283 (355)
T ss_pred cchHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777777776655544
No 78
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.75 E-value=0.0005 Score=70.18 Aligned_cols=80 Identities=8% Similarity=-0.009 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.++.+++..++.-.++..+..+...|..+ .++-++. .. .+.+..+.+...+.+++..++.+|++
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-~~g~s~~-------------~a-~~~~~~~~~~~~ig~~~~G~lsDr~g 322 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-ELGFSKE-------------DA-INTFTLFEIGALVGSLLWGWLSDLAN 322 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 567888888888777777777777777755 4554432 11 23344555667777788889999999
Q ss_pred chHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFAC 323 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~ 323 (370)
+|+.......+.+++
T Consensus 323 ~r~~~~~~~~~~~~~ 337 (467)
T PRK09556 323 GRRALVACIALALII 337 (467)
T ss_pred CCchHHHHHHHHHHH
Confidence 888766655444433
No 79
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.65 E-value=0.0012 Score=70.49 Aligned_cols=59 Identities=14% Similarity=0.209 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 37 I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
..+.+++=.+.=++.-..+....+|+.|..|++++.++.++......+|.++|+++|+.
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 34445566677888888888899999999999999999999999999999999999875
No 80
>PRK09528 lacY galactoside permease; Reviewed
Probab=97.61 E-value=0.00082 Score=67.33 Aligned_cols=46 Identities=9% Similarity=0.118 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+.++.+...+..++.+++.+|+|+|+...++.++.+++++...+..
T Consensus 268 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~ 313 (420)
T PRK09528 268 NSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT 313 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc
Confidence 3445555666677889999999999999998888888777666543
No 81
>PRK03633 putative MFS family transporter protein; Provisional
Probab=97.59 E-value=0.006 Score=60.27 Aligned_cols=47 Identities=13% Similarity=0.067 Sum_probs=37.1
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++......+..+.+.|..++++|.++.++.+....+|..+|..++..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 106 IGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333444456778899999999999999999999999999988764
No 82
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.57 E-value=0.00086 Score=68.94 Aligned_cols=206 Identities=11% Similarity=0.074 Sum_probs=107.8
Q ss_pred HHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHH---hhhhhhhhcccccccccccccccchhhhcccchhHHHH
Q 017498 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMA---VGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 121 (370)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~g---lG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f 121 (370)
++.-++.-+....+.|+++|..+ ++|..++++++..-+ +|.++|..+++. +.+.+ .-+.+|
T Consensus 128 ~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~--l~~~~-------------~~~~~f 191 (468)
T TIGR00788 128 FLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGP--LLDKT-------------LTRILF 191 (468)
T ss_pred HHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHH--HHHhc-------------CcchHH
Confidence 34445555677889999999999 777777777754443 799998877765 11111 135567
Q ss_pred HHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhccc
Q 017498 122 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 201 (370)
Q Consensus 122 ~i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 201 (370)
.+.+++.++. .+.....||++..... +. + + . + .. .
T Consensus 192 ~~~a~l~ll~-~~~~~~~~E~~~~~~~-~~-~-~--~----~-~~---------------------------~------- 226 (468)
T TIGR00788 192 LITAALLLLQ-LFVSNLSKERRAFVRP-RI-G-T--Y----L-EM---------------------------N------- 226 (468)
T ss_pred HHHHHHHHHH-HHHHHhcccccccccc-cc-c-c--c----c-hh---------------------------h-------
Confidence 7776666666 4445667886310000 00 0 0 0 0 00 0
Q ss_pred ccccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHH
Q 017498 202 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (370)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~ 281 (370)
.+.............++++++.+++ |.+++..+..|++|..-... .+..-+..+...+.+|+ +.|+-.
T Consensus 227 ~~~~~~~~~~~~~~~~~~l~~~l~~--~~i~~~l~fifl~~~~~~~~-~~~~f~~~~~~lG~s~~---------~~G~~~ 294 (468)
T TIGR00788 227 MALLTLGVLANVKVQILGLRGAIQL--LEIAKPLIFIFLSYANLPGA-SGSVFCATTQCLPGGPS---------FSGMSK 294 (468)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhc--HHHHHHHHHHHHHHhhcCCC-CceeEEEEcccCCCCcc---------hhhhHH
Confidence 0000000000011235566666543 56666555555543321111 10000111112222333 233222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 017498 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTA 328 (370)
Q Consensus 282 Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~ 328 (370)
...++...+...+..++.+|++.|++..++.++.+++.+..+
T Consensus 295 -----~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~ 336 (468)
T TIGR00788 295 -----VVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDL 336 (468)
T ss_pred -----HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCce
Confidence 223355666667778888999999999999999988876653
No 83
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.57 E-value=0.00061 Score=67.88 Aligned_cols=43 Identities=21% Similarity=0.250 Sum_probs=40.1
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
-.-+++||+++|+.+++.|.++.+..+..-|+|-++|=++|++
T Consensus 136 gnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 136 GNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred CchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhH
Confidence 3457999999999999999999999999999999999999987
No 84
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.55 E-value=0.0035 Score=62.04 Aligned_cols=77 Identities=9% Similarity=-0.069 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhhC
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG-VSSFLIEPMCRWIG 308 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~-l~s~il~~l~~~ig 308 (370)
.++.++...++...+...+..|.+.|.-+ . +-+++ ..|.. +..+.++.. +..++..++.+|+|
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~-G~s~~-------------~ig~~-~~~~~~~~~~~g~~~~g~l~~r~g 272 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-A-GWPLE-------------WIGRL-GMAGGAVTVLLGCGGGAWLVRRAG 272 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-c-CCCHH-------------HHHHH-HhHHHHHHHHHHHHHHHHHHHHhh
Confidence 46777777777777777777777777654 2 22221 22221 222333333 34567899999999
Q ss_pred chHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFA 322 (370)
Q Consensus 309 ~r~v~~~s~~i~a~ 322 (370)
+|++..++.++.++
T Consensus 273 ~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 273 LWRTFILGVGLAGS 286 (390)
T ss_pred HHHHHHHHHHHHHH
Confidence 99988877766533
No 85
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.55 E-value=0.0051 Score=62.71 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=39.3
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++........-+++.|..|+++|.+++++......+|+++|..+++.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 120 MGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778899999999999999999999999999999887754
No 86
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.51 E-value=0.0035 Score=64.42 Aligned_cols=78 Identities=10% Similarity=0.055 Sum_probs=47.1
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
.|..+++.|..|+++|.+++++...+..+|+.++..+..... .........+ ....|+.|.+.+++.++..++.
T Consensus 142 ~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~-----~~gWr~~f~i~g~l~l~~~l~~ 215 (476)
T PLN00028 142 VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVF-PLIKDAGAPS-----FTAWRIAFFVPGLLHIIMGILV 215 (476)
T ss_pred HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCcc-----hhhhHHHHHHHHHHHHHHHHHH
Confidence 456778999999999999999998888888877755442200 0000000000 0146888888766655555544
Q ss_pred eeEe
Q 017498 136 IYFA 139 (370)
Q Consensus 136 ~~~v 139 (370)
.+..
T Consensus 216 ~~~~ 219 (476)
T PLN00028 216 LTLG 219 (476)
T ss_pred HHHc
Confidence 4443
No 87
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.47 E-value=0.0015 Score=67.57 Aligned_cols=228 Identities=15% Similarity=0.182 Sum_probs=120.5
Q ss_pred HHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhH--HHHHH
Q 017498 46 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK--AAFLV 123 (370)
Q Consensus 46 llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k--~~f~i 123 (370)
++-.+.-..++-.=-|+....|++.|+.......+...+|-++|..+| .++++ ++ +.. +++.+
T Consensus 125 i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~----l~~il---Gt--------~~~W~~l~~~ 189 (485)
T KOG0569|consen 125 IVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLG----LPSLL---GT--------EDLWPYLLAF 189 (485)
T ss_pred HHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHc----cHHhc---CC--------CcchHHHHHH
Confidence 334444555566667999999999999999999888888888887666 22332 22 233 33333
Q ss_pred HHHHHHHHhhheeeEeeccCCCCCC-CCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccc
Q 017498 124 AVVFLTLCALVTIYFADEVPLTVNQ-PNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 202 (370)
Q Consensus 124 ~ai~l~itv~~T~~~v~E~p~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 202 (370)
..+ ..+..+..+...||.|---.. .++ .+...+.++.-+. ... .......+.++.
T Consensus 190 ~~i-~~~~~l~~l~~~PESPk~Ll~~k~~--------~~~A~~sl~~y~G----------~~~-----~~~~~e~~~~e~ 245 (485)
T KOG0569|consen 190 PLI-PALLQLALLPFLPESPKYLLIKKGD--------EEEARKALKFYRG----------KED-----VEAEIEEMLREI 245 (485)
T ss_pred HHH-HHHHHHHHHhcCCCCcchHHHHcCC--------HHHHHHHHHHHhC----------CCc-----chhHHHHHHHHH
Confidence 333 333334456677997521111 110 0000001111110 000 000000000000
Q ss_pred cccCCCCCCCchhhHHHHHHHhccCCHHHHHHHHHHHHHH-HHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHH
Q 017498 203 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTW-LSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 281 (370)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW-~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~ 281 (370)
+++ +.. +....+++++++. +++=+++...+.+++.-- -|..+..+|.|+...+. |-+ +++.
T Consensus 246 ~~~-~~~-~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a---G~~---------~~~a--- 307 (485)
T KOG0569|consen 246 EEE-ELE-KKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA---GFT---------PEEA--- 307 (485)
T ss_pred HHh-ccc-cccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc---CCC---------HHHH---
Confidence 110 111 1123467788775 234455777777777653 45566666666644331 111 1111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 282 Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.++-..-+++..+++++-+.+++|+|||.+.+.+..+.+++.+.+...-
T Consensus 308 -~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~ 356 (485)
T KOG0569|consen 308 -QYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIAL 356 (485)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334456677777778999999999999999998877776655543
No 88
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=97.42 E-value=0.0017 Score=65.54 Aligned_cols=210 Identities=12% Similarity=0.030 Sum_probs=121.0
Q ss_pred HHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcc--cc-----cccccccccccchhhhcccc
Q 017498 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG--AS-----GSWHRWFPFLTSRACCAACG 115 (370)
Q Consensus 43 gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G--~i-----~~~~~~~~~~~~~~~~~~~~ 115 (370)
-+.+.+.+.+..+.+.-|++.|+.++++-.+..+..=-+.-+|+++-.... .+ .-++.. .++- -...+.
T Consensus 121 ~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~--l~~l--~~~~~~ 196 (438)
T COG2270 121 FLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITII--LLGL--PPADGE 196 (438)
T ss_pred HHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEE--eecc--Cccccc
Confidence 344568899999999999999999998766554333333334443333221 00 001111 0000 122456
Q ss_pred hhHHHHHHHHHHHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhh
Q 017498 116 NLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANL 195 (370)
Q Consensus 116 q~k~~f~i~ai~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 195 (370)
..|..+.++++-+++-.+-.+..+|+.+.....
T Consensus 197 ~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~~~----------------------------------------------- 229 (438)
T COG2270 197 DVRITGLLAALWWLLFALPMILNVHDAEKISSP----------------------------------------------- 229 (438)
T ss_pred cchhHHHHHHHHHHHHHhHHHhccccccccccc-----------------------------------------------
Confidence 889999999999988888777787765321100
Q ss_pred hhhcccccccCCCCCCCchhhHHHHHHHhccCC--HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhH
Q 017498 196 KHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLP--PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVK 273 (370)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~si~~mP--~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~ 273 (370)
......+.+|+++.++++.- +.+.+-.++-|+=-=|..+.+-+.+.|-.. .|+=.
T Consensus 230 -------------~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~-~~gls--------- 286 (438)
T COG2270 230 -------------PPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA-DLGLS--------- 286 (438)
T ss_pred -------------chHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH-HcCcc---------
Confidence 00111234555555554432 245555555544444445555555544322 23211
Q ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 274 FYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 274 ~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
-..++-+|+. -++++++.+++.+++.+|+|.|++...+.++..+.-+...+.+
T Consensus 287 ----~~~lll~g~~-~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~ 339 (438)
T COG2270 287 ----STELLLIGIA-LSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE 339 (438)
T ss_pred ----HHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc
Confidence 1244556553 4567888899999999999999999999887655444444443
No 89
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.31 E-value=0.0038 Score=64.39 Aligned_cols=202 Identities=18% Similarity=0.206 Sum_probs=123.8
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHH-HHHHHHHHhhh
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV-AVVFLTLCALV 134 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i-~ai~l~itv~~ 134 (370)
.....++.--.|++||.+..++.+...-+|++++.-+++.+ -+.-++ -+.+|++ +++.++.++++
T Consensus 147 pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~l-c~s~~G-------------W~sifY~~g~~g~i~~~~w 212 (466)
T KOG2532|consen 147 PAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLL-CESSLG-------------WPSIFYVFGIVGLIWFILW 212 (466)
T ss_pred hhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-hccCCC-------------CchHHHHHHHHHHHHHHHH
Confidence 34455666678999999999999999999999998655441 110011 1344555 44444444444
Q ss_pred eeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCch
Q 017498 135 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 214 (370)
Q Consensus 135 T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (370)
-. ...|.|-+ + +...+.+.+.+.+.+. + ++...+..
T Consensus 213 ~~-~~~d~P~~--h--------~~is~~El~~I~~~k~-------------------------------~--~~~~~~~~ 248 (466)
T KOG2532|consen 213 FL-FYSDSPSK--H--------PNISEKELKYIEKGKS-------------------------------E--AHVKKKPP 248 (466)
T ss_pred HH-HhcCCccc--C--------CCCCHHHHHHHHhccc-------------------------------c--cccCCCCC
Confidence 43 34454321 1 0001111111111110 0 00001022
Q ss_pred hhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHH
Q 017498 215 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 294 (370)
Q Consensus 215 ~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~ 294 (370)
-..++++++ ++++-+++++|.-=.+++.++.|.-+|+-| |.+=|-+ +.| -..++=.+...++..
T Consensus 249 vP~~~i~ts-----~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~---------~~G-~~salP~l~~~~~k~ 312 (466)
T KOG2532|consen 249 VPYKAILTS-----PPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFDVR---------ETG-FLSALPFLAMAIVKF 312 (466)
T ss_pred CCHHHHHcC-----HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCChh---------hhh-HHHHHHHHHHHHHHH
Confidence 347777776 789999999999999999999999999988 7665554 112 233444455556667
Q ss_pred HHHHHHHHHHhh-h----CchHHHHHHHHHHHHHHHHHHHHh
Q 017498 295 VSSFLIEPMCRW-I----GSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 295 l~s~il~~l~~~-i----g~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+++.+-+++.+| + -+|..-.+++...+++++.+.+++
T Consensus 313 ~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~ 354 (466)
T KOG2532|consen 313 VAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTS 354 (466)
T ss_pred HHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecC
Confidence 777777777765 2 256778889999999998888887
No 90
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.21 E-value=0.011 Score=60.95 Aligned_cols=78 Identities=21% Similarity=0.306 Sum_probs=62.7
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
+-.-.=||++|++..+.|....++-+-..++|..+|-++|+. +.+.. ..-.+|.++++..++..+
T Consensus 129 ~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~--~~~~~-------------~~a~~f~ia~~~~~~~~~ 193 (463)
T KOG2816|consen 129 IFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY--LVKFL-------------GIALVFLIAAASGILSLL 193 (463)
T ss_pred hhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHhc-------------CchHHHHHHHHHHHHHHH
Confidence 344556789999999999999999999899999999988875 33332 245678999999999999
Q ss_pred heeeEeeccCCCC
Q 017498 134 VTIYFADEVPLTV 146 (370)
Q Consensus 134 ~T~~~v~E~p~~~ 146 (370)
...+++||.-.++
T Consensus 194 y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 194 YMLLFLPESLQEK 206 (463)
T ss_pred HHhhccccccCcc
Confidence 9999999974443
No 91
>PRK10054 putative transporter; Provisional
Probab=97.19 E-value=0.0023 Score=63.98 Aligned_cols=91 Identities=10% Similarity=0.039 Sum_probs=72.8
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 226 ~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
+|||+.+-+.++.|+.++++....-+.+.|+.+ .++-++. .. .+.+..+.+...+.+.+..++.+
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~-~~g~s~~-------------~~-g~~~s~~~~~~~~~~~~~G~l~D 68 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSR-QYSLSVD-------------LI-GYAMTIALTIGVVFSLGFGILAD 68 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 489999999999999999999999898888865 3443321 22 34455667777888888999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 306 WIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 306 ~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|+|+|++..++.++.+++++...+.+
T Consensus 69 r~g~k~~~~~~~~~~~~~~~~~~~~~ 94 (395)
T PRK10054 69 KFDKKRYMLLAITAFASGFIAIPLVN 94 (395)
T ss_pred hcCcchhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999888887777665
No 92
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.06 E-value=0.016 Score=59.17 Aligned_cols=71 Identities=14% Similarity=0.034 Sum_probs=47.3
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
...|.-+++.|..| ++|.++.++.+...++|+.++-.+++. .... ...|..|.+.+++.+++.+
T Consensus 125 ~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~--l~~~-------------~gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 125 NFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY--LFES-------------FGWRGSFLILGGLLLHCCV 188 (455)
T ss_pred hhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH--HHHH-------------hChHHHHHHHHHHHHHHHH
Confidence 34566778888885 788999999998888888887665543 1111 1367788887776666555
Q ss_pred heeeEee
Q 017498 134 VTIYFAD 140 (370)
Q Consensus 134 ~T~~~v~ 140 (370)
..++..+
T Consensus 189 ~~~~~~~ 195 (455)
T TIGR00892 189 CGALMRP 195 (455)
T ss_pred HHHHhCC
Confidence 4444433
No 93
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=96.97 E-value=0.024 Score=57.18 Aligned_cols=96 Identities=11% Similarity=0.026 Sum_probs=58.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017498 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (370)
Q Consensus 225 ~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~ 304 (370)
.+-| .++.+.+..++...+......|...|+.+ ++.+|... ++ -+...-...+.++.+...+..++.+++.
T Consensus 205 ~k~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~-~~-----~~~~~~g~~~~~~~i~~i~~~~~~g~l~ 275 (418)
T TIGR00889 205 FKNK-RMAIFFFFSMLLGAPLQITNIFGNGFLHE--FGRNPEFA-DS-----FVVKNASIWMSLSQFSEIFFILTIPFFL 275 (418)
T ss_pred hcCC-CeeeHHHHHHHHHhHHHHHHHhHHHHHHH--hccccccc-ch-----hhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344 34556666777666655555555656544 23333210 00 0112223445566666777778889999
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 305 RWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 305 ~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+|+|+|++..++.++.++++....+
T Consensus 276 dr~g~r~~l~~~~~~~~v~~~l~~~ 300 (418)
T TIGR00889 276 KRFGIKKVMLLSLVAWALRFGFFAY 300 (418)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988887655443
No 94
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.94 E-value=0.047 Score=56.35 Aligned_cols=186 Identities=12% Similarity=0.005 Sum_probs=105.5
Q ss_pred chhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc-cccccccccccchh-hhcc--cchhHHHHHHHHHHHHH
Q 017498 55 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS-GSWHRWFPFLTSRA-CCAA--CGNLKAAFLVAVVFLTL 130 (370)
Q Consensus 55 q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i-~~~~~~~~~~~~~~-~~~~--~~q~k~~f~i~ai~l~i 130 (370)
..+.-..+....|+++|.+++++..-..++|..++..+.-. .... .+...+... .... ..-.|.++.+-++++++
T Consensus 145 f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~-l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv 223 (462)
T PRK15034 145 FASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP-VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAI 223 (462)
T ss_pred HHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHhccccccccccchHHHHHHHHHHHHHHHH
Confidence 34666778889999999999999987778888877665421 0000 000000000 0000 01255555555555555
Q ss_pred HhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCC
Q 017498 131 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 210 (370)
Q Consensus 131 tv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (370)
..++..+..++.|. +
T Consensus 224 ~~i~~~~~~~~~~~---~-------------------------------------------------------------- 238 (462)
T PRK15034 224 ATIAAWSGMNDIAS---S-------------------------------------------------------------- 238 (462)
T ss_pred HHHHHHHhCCCccc---c--------------------------------------------------------------
Confidence 54444444333210 0
Q ss_pred CCchhhHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHH
Q 017498 211 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 290 (370)
Q Consensus 211 ~~~~~~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~s 290 (370)
+..+++..+ +.++|+ .|.+|+.-+.+.-++..+..|+..|.-+ .|. + ....+... +..
T Consensus 239 ---~~~~~~~~~-vlk~~~-~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~---~---------~~~l~~~~----l~~ 296 (462)
T PRK15034 239 ---RASIADQLP-VLQRLH-LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFP---D---------VNILRLAF----FGP 296 (462)
T ss_pred ---ccCHHHHHH-HhCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcC---h---------HHHHHHHH----HHH
Confidence 012344444 445665 6999999999888888888777666433 331 0 01112222 233
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHH
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTA 328 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~ 328 (370)
++..+...+-..+.+|+|+|++..++.+..+++...++
T Consensus 297 l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 297 FIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 44555555567888999999999998887777764433
No 95
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.92 E-value=0.022 Score=59.15 Aligned_cols=227 Identities=11% Similarity=0.170 Sum_probs=120.8
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
.-++.-..+...=-|+.|++|++.|..-.+..+.+..+|-.+||.+|... ++. + .+-|..+.++.+
T Consensus 152 ~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~--~~~-~-----------~~Wr~~~~~~~i 217 (513)
T KOG0254|consen 152 TGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT--SKV-Y-----------AGWRIPLGLALI 217 (513)
T ss_pred hccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh--ccC-C-----------ccHHHHHHHHHH
Confidence 34555556677778999999999999999999999999999999998762 111 1 134556666655
Q ss_pred HHHHHhhheeeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhc-cccccc
Q 017498 127 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHIS-KKAEDT 205 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~ 205 (370)
--++-.+. +++.||.|---.+..+. ....+.....+.- +..+.. .....+. +...+.
T Consensus 218 ~~~~~~~~-~~~~pesp~~L~~~g~~--------~~a~~~l~~l~g~---------~~~~~~----~~~~~~~~~~~~~~ 275 (513)
T KOG0254|consen 218 PAVILALG-MLFLPESPRWLIEKGRL--------EEAKRSLKRLRGL---------SPEDVE----VELELLKIKLLVEA 275 (513)
T ss_pred HHHHHHHH-HHhCCCChHHHHHcCCh--------HHHHHHHHHHhCC---------CCcchH----HHHHHHHHHHHHhh
Confidence 55555555 77888875322110000 0000000000000 000000 0000000 000000
Q ss_pred CCCCCCCchhhHHHHHHHhccCCHHHHH-HHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHH
Q 017498 206 NGSFNDGPGAVLVNLLTSLRHLPPAMHV-VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 284 (370)
Q Consensus 206 ~~~~~~~~~~~~~~l~~si~~mP~~~~~-lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~ 284 (370)
.... .....+++++ +++.+.... +++.-|.-+.|+....+|.++.....-+. ++. .+
T Consensus 276 ~~~~---~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~-~~~----------------~~ 333 (513)
T KOG0254|consen 276 EVAE---GKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLK-SDT----------------FL 333 (513)
T ss_pred hccc---ccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCC-Cch----------------HH
Confidence 0000 0012344444 445554443 44444555677777777777664432211 110 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+..+.+++..+..++--.+++|+|||.+.+.|.+.+++|++.+....
T Consensus 334 ~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~ 380 (513)
T KOG0254|consen 334 ASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVG 380 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHH
Confidence 22333444444444446778888999999999999999998776654
No 96
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.90 E-value=0.0039 Score=63.59 Aligned_cols=76 Identities=25% Similarity=0.252 Sum_probs=60.3
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
+-.-+-.+|.|..|++||+++++|+.+-+-.|..+||.+|.. -.+..+ .=|+.|...+++-+++.+
T Consensus 138 ~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~--va~~~~------------~Wr~af~~~avl~vi~~~ 203 (493)
T KOG1330|consen 138 YSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV--VASLTF------------WWRWAFRGSAVLGVIVGL 203 (493)
T ss_pred hcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee--eccCcc------------ceEEEEEeehHHHHHHHH
Confidence 333456799999999999999999999999999999999975 111111 136677788888888989
Q ss_pred heeeEeeccC
Q 017498 134 VTIYFADEVP 143 (370)
Q Consensus 134 ~T~~~v~E~p 143 (370)
++.++++|+.
T Consensus 204 L~~~f~~eP~ 213 (493)
T KOG1330|consen 204 LVFLFVREPE 213 (493)
T ss_pred HHHhhccCcc
Confidence 9999999963
No 97
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.63 E-value=0.087 Score=56.00 Aligned_cols=114 Identities=10% Similarity=0.123 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017498 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (370)
Q Consensus 227 mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ 306 (370)
.+|.+.-.+++.|+.=+-++++..|++..+.. +|..||.... +.| +-...+++...+.++++..+.++
T Consensus 308 ~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~-vf~~d~~~~~------~~~-----~~s~~~~fg~~~g~~i~g~l~~~ 375 (599)
T PF06609_consen 308 DRRGFAALLVISFISGMNFFSVNILWPQQVVN-VFGSDPISIT------EIG-----WISSPVGFGSCAGAVILGLLFSK 375 (599)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hccCCCcccc------eee-----hhhhhHHHHHHHHHHHHHHHHHH
Confidence 35667777778877766688888888877765 8877775210 111 11112333344445566677766
Q ss_pred hCc-hHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhccccc
Q 017498 307 IGS-RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 368 (370)
Q Consensus 307 ig~-r~v~~~s~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~~~a 368 (370)
+++ |...+++-+++.++..+|.-++ |+..+.+-+...++-+|+.|+
T Consensus 376 ir~~Kw~li~~~~~~ta~~Gama~~~----------------~~n~~~~i~~~~l~g~giG~~ 422 (599)
T PF06609_consen 376 IRHIKWQLIFGSVLMTAFCGAMAAVR----------------PDNKNAAIAFLVLAGFGIGGI 422 (599)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHcc----------------CCCcchHHHHHHHHHHhHHHH
Confidence 654 5555577777777666666665 222234445566666666664
No 98
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.59 E-value=0.094 Score=54.21 Aligned_cols=47 Identities=19% Similarity=0.235 Sum_probs=37.4
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
=++......-.=.+++|++++++|..+.++ ..+.-.|+.++...+++
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~ 228 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAY 228 (521)
T ss_pred HhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHH
Confidence 356667777788899999999999999999 77777777777666654
No 99
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=96.39 E-value=0.048 Score=55.63 Aligned_cols=82 Identities=16% Similarity=0.251 Sum_probs=50.8
Q ss_pred HHhhcccccchhhHHHHhcCCCchhhh--hHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHH
Q 017498 46 LLDLANNTVQGPARALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 123 (370)
Q Consensus 46 llD~s~n~~q~P~RAli~D~~p~~qq~--~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i 123 (370)
+..++.-.+...+-|++++....+.+. .-.++.-.+..+|+++|..+++.. .++ ...+..|.+
T Consensus 95 la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l-~~~--------------~~~~~~f~i 159 (433)
T PF03092_consen 95 LASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPL-LDS--------------FGPQGVFLI 159 (433)
T ss_pred HHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhh-hhc--------------CCCeEEehH
Confidence 334555566777888888888554444 334444556678899998887651 111 123556777
Q ss_pred HHHHHHHHhhheeeEeecc
Q 017498 124 AVVFLTLCALVTIYFADEV 142 (370)
Q Consensus 124 ~ai~l~itv~~T~~~v~E~ 142 (370)
.+++..+.++.+++..+|+
T Consensus 160 ~~~~~~l~~~~~~~~~~e~ 178 (433)
T PF03092_consen 160 SAALPLLMLIVALFLLEER 178 (433)
T ss_pred HHHHHHHHHHHHHHhhhhc
Confidence 7766666666666666663
No 100
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.23 E-value=0.012 Score=47.81 Aligned_cols=82 Identities=21% Similarity=0.340 Sum_probs=60.0
Q ss_pred HHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHH
Q 017498 45 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 124 (370)
Q Consensus 45 ~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ 124 (370)
.+..++....+....+++.|..|+++|.+++++.+....+|+.+|..+++.. .+. .+.+..|.+.
T Consensus 59 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~-------------~~~~~~~~~~ 123 (141)
T TIGR00880 59 FLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVL--AQF-------------LGWRAPFLFL 123 (141)
T ss_pred HHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH--hcc-------------cchHHHHHHH
Confidence 3445666667778889999999999999999999999999999998877641 111 1245667776
Q ss_pred HHHHHHHhhheeeEeec
Q 017498 125 VVFLTLCALVTIYFADE 141 (370)
Q Consensus 125 ai~l~itv~~T~~~v~E 141 (370)
.++.+++.+...+..||
T Consensus 124 ~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 124 AILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHHHHhhcCCC
Confidence 66666666655555555
No 101
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=96.16 E-value=0.086 Score=53.29 Aligned_cols=182 Identities=14% Similarity=0.064 Sum_probs=106.6
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
+-.-+++.-..|+++|..|++++. +.++|..+.-+++=. .-..+++ .-.+.+..+-.+.++++.+.-
T Consensus 123 av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~--v~~~~g~----------~~w~~~~~i~~~~l~v~~v~~ 189 (417)
T COG2223 123 AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL--VAVAFGF----------LAWRNVAGIYVVALAIAAVLA 189 (417)
T ss_pred hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH--HHHHHhh----------HHHHHHHHHHHHHHHHHHHHH
Confidence 344456777889999999999999 888888887655411 0001110 013444444555555555555
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchh
Q 017498 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (370)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (370)
.+..++.|-.....+ + ..+ .
T Consensus 190 ~~~~~d~p~~r~~~~--------------------------------------------------------~---~~~-~ 209 (417)
T COG2223 190 WLGMNDVPEHRASVK--------------------------------------------------------P---QLP-A 209 (417)
T ss_pred HHHhCCChhhhcccc--------------------------------------------------------c---cch-h
Confidence 555555432100000 0 000 1
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHH
Q 017498 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 295 (370)
Q Consensus 216 ~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l 295 (370)
.++.+++ -+..|.+|+..+.+.=++..|..|...|.-. .|.-++. +.| -++ ..+.+.+.+
T Consensus 210 ~~~~v~~-----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~-~fg~~~~---------~Ag----~~a-~~f~~~g~l 269 (417)
T COG2223 210 QLKAVFS-----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT-QFGLSPV---------TAG----LIA-FLFPLIGAL 269 (417)
T ss_pred HHHHHhc-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh---------hHH----HHH-HHHHHHHHH
Confidence 1222222 2578999999999999999999999988765 7876654 122 111 122222222
Q ss_pred HHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 296 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 296 ~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.=..=..+..|+|.+|+-.......+++++...+.
T Consensus 270 ~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 270 ARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHhccchhhhhccchhHHHHHHHHHHHHHHHHHcc
Confidence 21122467889999999998888888887664443
No 102
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.14 E-value=0.037 Score=55.34 Aligned_cols=91 Identities=20% Similarity=0.143 Sum_probs=70.0
Q ss_pred hccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017498 224 LRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPM 303 (370)
Q Consensus 224 i~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l 303 (370)
-+++|| +.+..++++.+.+++.+.-|...|+.+ ..+-++ ...| +.+..+.+...+.+.+..++
T Consensus 7 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~-------------~~~g-l~~~~~~l~~~~~~~~~G~l 69 (400)
T PRK11646 7 ARNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVD-QLGWAA-------------VMVG-IALGLRQFIQQGLGIFGGAI 69 (400)
T ss_pred cccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCcH-------------HHHH-HHHHHHHHHHHHHHhhhhHH
Confidence 456888 788899999999999999888887654 233222 1222 44555667777778888999
Q ss_pred HhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 304 CRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 304 ~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+|+|+|++...+.++.+++++.+.+.+
T Consensus 70 ~dr~g~k~~l~~~~~~~~~~~~~~~~~~ 97 (400)
T PRK11646 70 ADRFGAKPMIVTGMLMRAAGFATMAIAH 97 (400)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999988876653
No 103
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.01 E-value=8.5e-05 Score=74.79 Aligned_cols=85 Identities=14% Similarity=0.183 Sum_probs=59.0
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
-++....+...-.|+.+.+|++.|.+..++.+....+|.+++++++.. +.+..+ ..+-|..+.++++.
T Consensus 113 G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~--~~~~~~----------~~~Wr~~~~~~~~~ 180 (451)
T PF00083_consen 113 GFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYI--VSYYSD----------NWGWRILLIFGAIP 180 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccc--cccccc----------cccccccccccccc
Confidence 345556777888899999999999999999999999999998888754 111111 02356666666554
Q ss_pred HHHHhhheeeEeeccCCC
Q 017498 128 LTLCALVTIYFADEVPLT 145 (370)
Q Consensus 128 l~itv~~T~~~v~E~p~~ 145 (370)
.++ +.+.....||.|.-
T Consensus 181 ~l~-~~~~~~~~pESP~w 197 (451)
T PF00083_consen 181 SLL-VLLLRFFLPESPRW 197 (451)
T ss_pred ccc-ccccccccccccce
Confidence 444 34455788998653
No 104
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.01 E-value=0.089 Score=54.46 Aligned_cols=84 Identities=21% Similarity=0.252 Sum_probs=55.2
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc----cc-cccccc-cccchhhhcccchhHHHHHHHHH
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS----GS-WHRWFP-FLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i----~~-~~~~~~-~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
...+..|+|+.|..-++||.+|.+..+.-..+|-++|-.++.. .+ =-+++| .. -.+.-..-.+.++
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~--------~n~YTap~w~m~i 216 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLI--------FNMYTAPAWLMAI 216 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcce--------EEecchHHHHHHH
Confidence 4568999999999999999999987776555556666555432 10 000111 11 1245555666777
Q ss_pred HHHHHhhheeeEeeccCC
Q 017498 127 FLTLCALVTIYFADEVPL 144 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~p~ 144 (370)
+-++..++..++.||..-
T Consensus 217 ~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 217 LWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHHHhheeeccc
Confidence 888888888889999743
No 105
>PRK03633 putative MFS family transporter protein; Provisional
Probab=95.85 E-value=0.044 Score=54.07 Aligned_cols=90 Identities=13% Similarity=0.048 Sum_probs=70.6
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 226 ~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
...|++..++..+++.+++..-...+...|..+ ++-++. .. .+.+..+.+...+.+++..++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~s~~-------------~~-G~~~s~~~l~~~~~~~~~g~l~d 66 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--EHLPTW-------------QV-GVVSSSYFTGNLVGTLLAGYVIK 66 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--cCCCHH-------------HH-HHHHHHHHHHHHHHHHhHHHHHH
Confidence 346789999999999999998888888888765 443221 12 34566777777888888999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 306 WIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 306 ~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|+|+|++..++.++.+++++...+.+
T Consensus 67 r~g~k~~~~~~~~~~~~~~~~~~~~~ 92 (381)
T PRK03633 67 RIGFNRSYYLASLIFAAGCAGLGLMV 92 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999998887766554
No 106
>PRK10091 MFS transport protein AraJ; Provisional
Probab=95.52 E-value=0.12 Score=51.16 Aligned_cols=89 Identities=7% Similarity=-0.088 Sum_probs=68.1
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017498 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (370)
Q Consensus 227 mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ 306 (370)
|++.++.++..+|..+++-+.+.-..+.+..+ |+-++. + ..+....+.+...+.+.+..++.+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~s~~---------~-----~g~~~s~~~~~~~~~~~~~g~l~dr 64 (382)
T PRK10091 1 MKKVILSLALGTFGLGMAEFGIMGVLTELAHD--VGISIP---------A-----AGHMISYYALGVVVGAPIIALFSSR 64 (382)
T ss_pred CcchHHHHHHHHHHHHhhHHHHHhChHHHHHH--cCCCHH---------H-----HhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 78899999999999999877776666665544 332221 1 1344566777788888889999999
Q ss_pred hCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 307 IGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 307 ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+|+|++..++.++.+++.+...+.+
T Consensus 65 ~g~r~~~~~~~~~~~~~~~l~~~~~ 89 (382)
T PRK10091 65 YSLKHILLFLVALCVIGNAMFTLSS 89 (382)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999888777654
No 107
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.41 E-value=0.01 Score=60.51 Aligned_cols=118 Identities=16% Similarity=0.201 Sum_probs=71.6
Q ss_pred ccCCcccccccCCCcchhHHHHHH----HHHHHhhcccc----cchhhH-------------HHHhcCCCchhhhhHHHH
Q 017498 19 LGDTKEHCSKFRGTRTRAAFVFVI----GFWLLDLANNT----VQGPAR-------------ALLADLSGPDQRNSANAI 77 (370)
Q Consensus 19 lgd~s~~~~~~~g~r~~~I~l~v~----gv~llD~s~n~----~q~P~R-------------Ali~D~~p~~qq~~a~a~ 77 (370)
+|..||||++|+|||||+|+...+ ++.++-++.++ ...|.+ -.+.|++...-|.-+=+.
T Consensus 87 vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~ 166 (498)
T KOG0637|consen 87 VGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRAL 166 (498)
T ss_pred ccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHH
Confidence 688999999999999999998854 44445444433 222221 234455544333322221
Q ss_pred -------------HHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCC
Q 017498 78 -------------FCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 144 (370)
Q Consensus 78 -------------~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~ 144 (370)
+.-+.++-..+|..+| |..+ ...+.+.+..|.....+.+.|+.++..++.|.++
T Consensus 167 L~Dl~~~d~~~~~Ans~f~~f~avGnvLG----------Y~~g---~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L 233 (498)
T KOG0637|consen 167 LADLARGDAKKTRANSVFSFFMAVGNVLG----------YALG---SYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTL 233 (498)
T ss_pred HHHhccChhhhhccchhHHHHHHhcceee----------eecc---cccCceEEeehHHHHHHHHHHHHHHHHHHHhhhh
Confidence 1112222333333333 2221 1345688899999999999999999999999988
Q ss_pred CCCCC
Q 017498 145 TVNQP 149 (370)
Q Consensus 145 ~~~~~ 149 (370)
.+.+.
T Consensus 234 ~~i~~ 238 (498)
T KOG0637|consen 234 LLIET 238 (498)
T ss_pred hheec
Confidence 76553
No 108
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=95.36 E-value=0.41 Score=49.29 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=49.6
Q ss_pred hcccccchhhHHHHhcCCCchh---hhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQ---RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 125 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~q---q~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~a 125 (370)
++.........+++.|..|+++ |++++++......+|+++|..+++.. .++ ...+..|.+.+
T Consensus 114 ~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l-~~~--------------~g~~~~f~~~~ 178 (475)
T TIGR00924 114 VGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI-AEN--------------YGYHVGFNLAA 178 (475)
T ss_pred hccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH-HHh--------------cChHHHHHHHH
Confidence 3333445566789999998754 77899999999999999998887641 110 13577888877
Q ss_pred HHHHHHhhh
Q 017498 126 VFLTLCALV 134 (370)
Q Consensus 126 i~l~itv~~ 134 (370)
+.+++++++
T Consensus 179 ~~~~~~~l~ 187 (475)
T TIGR00924 179 VGMVIGLLT 187 (475)
T ss_pred HHHHHHHHH
Confidence 666665544
No 109
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=95.32 E-value=0.023 Score=61.99 Aligned_cols=79 Identities=16% Similarity=0.102 Sum_probs=58.6
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
+-+..+.......+++.|+.|.++|++++++.+.+..+|+++|-.+++.. +. . .....|++.++
T Consensus 658 ~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L-~~-~--------------~~~~pf~i~a~ 721 (742)
T TIGR01299 658 FGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSF-VG-I--------------TKAAPILFASA 721 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-h--------------hhHHHHHHHHH
Confidence 34556667788999999999999999999999999999999999887541 11 0 12456777776
Q ss_pred HHHHHhhheeeEeecc
Q 017498 127 FLTLCALVTIYFADEV 142 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~ 142 (370)
+++++.++.++ .||.
T Consensus 722 ~lll~~ll~~~-LPET 736 (742)
T TIGR01299 722 ALACGGLLALK-LPDT 736 (742)
T ss_pred HHHHHHHHHHh-CCCC
Confidence 76666665543 3775
No 110
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.28 E-value=0.13 Score=55.68 Aligned_cols=61 Identities=18% Similarity=0.252 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 35 RAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 35 ~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
...++.++|-.++-+..-..+..-=.||-|.+.+++-..-.++...|.-+|=++||++|++
T Consensus 235 ~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~ 295 (735)
T KOG3626|consen 235 YPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSF 295 (735)
T ss_pred hhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHH
Confidence 3556778888899999999999999999999999999999999999999999999999986
No 111
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=95.27 E-value=0.46 Score=49.28 Aligned_cols=66 Identities=15% Similarity=0.193 Sum_probs=46.0
Q ss_pred cchhhHHHHhcCCCchh--hhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 017498 54 VQGPARALLADLSGPDQ--RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~q--q~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~it 131 (370)
......+++.|..|+++ ++.+.++.....++|+.+|..+++.. .+ .+ ..+..|.+.++.++++
T Consensus 129 ~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l-~~-~~-------------g~~~~F~i~~i~~~i~ 193 (500)
T PRK09584 129 FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWL-AA-KY-------------GWSVAFALSVVGMLIT 193 (500)
T ss_pred ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHH-HH-hh-------------CHHHHHHHHHHHHHHH
Confidence 34455689999998754 34578888889999999998887651 11 11 3678888887766665
Q ss_pred hhh
Q 017498 132 ALV 134 (370)
Q Consensus 132 v~~ 134 (370)
++.
T Consensus 194 ~i~ 196 (500)
T PRK09584 194 VVN 196 (500)
T ss_pred HHH
Confidence 543
No 112
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=94.97 E-value=0.79 Score=47.51 Aligned_cols=66 Identities=17% Similarity=0.268 Sum_probs=47.1
Q ss_pred cchhhHHHHhcCCCchh--hhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 017498 54 VQGPARALLADLSGPDQ--RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~q--q~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~it 131 (370)
.....-+++.|..|+++ +++++++.....++|+.+|..+++. ..+.+ ..+++|.+..+.+++.
T Consensus 122 ~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~--l~~~~-------------gw~~~F~i~~i~~~~~ 186 (489)
T PRK10207 122 FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPV--IADKF-------------GYSVTYNLCGAGLIIA 186 (489)
T ss_pred ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHH--HHHhh-------------ChHHHHHHHHHHHHHH
Confidence 44455789999998864 4678999999999999999887765 11111 2577888876655555
Q ss_pred hhh
Q 017498 132 ALV 134 (370)
Q Consensus 132 v~~ 134 (370)
++.
T Consensus 187 ~~~ 189 (489)
T PRK10207 187 LLV 189 (489)
T ss_pred HHH
Confidence 543
No 113
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=94.86 E-value=0.21 Score=51.44 Aligned_cols=92 Identities=7% Similarity=-0.020 Sum_probs=66.9
Q ss_pred ccCCHHHHHHHHHHHHHHHHhhhhhhhccccccce-eecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017498 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPM 303 (370)
Q Consensus 225 ~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~-vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l 303 (370)
++.|+.++.++.++++.=++++....+.+.|+-++ -++-++. .. .+-+..+++...+.+++..++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~-------------~a-g~~~~~~~~~~~~~~~~~G~l 71 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQE-------------QA-FIIFGAYSALVYLLTSVGWWF 71 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHH-------------HH-HHHHHHHHHHHHHHHhhHHHH
Confidence 35899999999999987777777766666665431 0111111 12 244566777788888888999
Q ss_pred Hhh-hCchHHHHHHHHHHHHHHHHHHHH
Q 017498 304 CRW-IGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 304 ~~~-ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.+| +|+|++..++.++.+++.+.+.+.
T Consensus 72 aDr~~G~~~~l~~~~~~~~~g~~~~~~~ 99 (475)
T TIGR00924 72 GDRVWGTKKTMVLGGIVLMLGHFMLAMS 99 (475)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHHHHhc
Confidence 988 899999999999999888776654
No 114
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=94.86 E-value=0.69 Score=47.10 Aligned_cols=146 Identities=12% Similarity=0.218 Sum_probs=89.4
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
.||-..+.--.|.++|.+..++=+.-.++|+.+.-.+-. | .+.... ..-|..|++.+++-++--++.
T Consensus 136 pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~---l----a~~~~~------~~w~~~f~~pgiiaiival~~ 202 (448)
T COG2271 136 PPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL---L----AFFAFH------GGWRAAFYFPGIIAIIVALIL 202 (448)
T ss_pred cHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH---H----HHHHhc------cchhHHHHHHHHHHHHHHHHH
Confidence 578889999999999998888888778888777654431 1 000000 145777888766666666667
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchh
Q 017498 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (370)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (370)
++..|+.|-.. ..+ + .++-++| ..+.+++ |+ ++...
T Consensus 203 ~~~~rd~Pqs~----GLP-------~-----ie~~~~d-------------------------~~e~~~~-~~--~~~~l 238 (448)
T COG2271 203 LFLLRDRPQSE----GLP-------P-----IEEYRGD-------------------------PLEIYEE-EK--ENEGL 238 (448)
T ss_pred HHHhCCCcccc----CCC-------C-----HHHhhcC-------------------------chhhhhh-hc--cCCCc
Confidence 77777764211 000 0 0000000 0000000 11 11113
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccc
Q 017498 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (370)
Q Consensus 216 ~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge 258 (370)
+.+|++..-.=--|.+|.+|++++|-.+.=+...-....|..|
T Consensus 239 s~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e 281 (448)
T COG2271 239 TAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE 281 (448)
T ss_pred cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 5666666655566999999999999999988888888888887
No 115
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=94.85 E-value=0.0073 Score=63.47 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=2.9
Q ss_pred cchhHHHHHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 33 RTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 33 r~~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
......+.++|-.++-++....+.--=+||-|.+++++-..-.++...+..+|-++||++|++
T Consensus 137 ~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 137 LSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp ---------------SSS---------------------------------------------
T ss_pred chHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 345578888999999999999999999999999999999999999999999999999999985
No 116
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=94.74 E-value=0.26 Score=46.48 Aligned_cols=84 Identities=12% Similarity=-0.026 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
..++..+++..+++..+..+.+.+..+ ++.++. .-.+....+.+...+.+.+..++.+|+|+|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--------------~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~ 65 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAED--LGLSAS--------------QAGLIVSAFSLGYALGSLLAGYLSDRFGRRR 65 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHH--cCCCHH--------------HHHHHHHHHHHHHHHHHHhHHHHHHHhCCch
Confidence 356677788888877777777777655 222221 1234455677778888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017498 312 VWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 312 v~~~s~~i~a~~~~~~~~~~ 331 (370)
+..++.++.+++.+.+.+.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~ 85 (352)
T cd06174 66 VLLLGLLLFALGSLLLAFAS 85 (352)
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 99999999999988877664
No 117
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=94.65 E-value=0.67 Score=48.34 Aligned_cols=148 Identities=12% Similarity=0.117 Sum_probs=90.5
Q ss_pred hhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc-cccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 017498 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS-GSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 135 (370)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i-~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T 135 (370)
+.-+++.--..+++|..-.++....+++|+++|.++... ...+... .-..-|+.|++..++.++..++.
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~----------~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG----------GLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC----------CcCCceeehhHHHHHHHHHHheE
Confidence 455667777899999999999999999999999888643 1111100 01246889999888888888888
Q ss_pred eeEeeccCCCCCCCCCCCCCCCCCCCcchhccccccCCCCCCCCCCCCCccCCcccchhhhhhcccccccCCCCCCCchh
Q 017498 136 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 215 (370)
Q Consensus 136 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (370)
.+..|+.|....-.+ .+++.. ..++..+..++. ... +....
T Consensus 224 f~~lp~~P~~~~fl~-----------~~ek~~--------------------------~~~~~~~~~~~~-~~~-~~~~~ 264 (495)
T KOG2533|consen 224 FFFLPDNPSKAWFLT-----------DEEKEL--------------------------VVERLRESPSGG-IEN-KFKWK 264 (495)
T ss_pred EEEecCChhhccccc-----------hHHHHH--------------------------HHHHHHhccCCC-ccc-ccCHH
Confidence 889998764221000 000000 000000000000 000 01122
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhccccccc
Q 017498 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (370)
Q Consensus 216 ~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge 258 (370)
.+++.++. +.++..++.+|+++.--..+..|.+-|+.+
T Consensus 265 ~~~~a~~d-----p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~ 302 (495)
T KOG2533|consen 265 GFKEALKD-----PGVWPFSLCYFFLKLVNYGFSYWLPLYLKS 302 (495)
T ss_pred HHHHHHhc-----hhHHHHHHHHHHHhhccccHHHHHHHHHHc
Confidence 34444433 568999999999999988888888888877
No 118
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=94.23 E-value=0.65 Score=45.63 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=63.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~ 309 (370)
....+++.+|+.-+++..+..+...|..+ ++-++. +..+ ... .+.+.++.+...+.+.+..++.+|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~------~~~~--~~~-g~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ--LGVTGH------SALN--MWS-GLVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH--hCCccc------hhHH--HHH-HHHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 45677788888888887777777777655 332221 0000 012 244566777778888888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 017498 310 RLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|++...+.++.+++++...+..
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~ 105 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQ 105 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998888877665543
No 119
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=94.23 E-value=0.51 Score=48.95 Aligned_cols=90 Identities=9% Similarity=0.007 Sum_probs=64.1
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 226 ~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
+.|+.++.++..+++..+++..+..+...|+-+ .++-++. +. .+....+..+......+..++.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~-~lg~s~~---------~a-----~~~~~~~~~~~~~~~~~~G~LaD 82 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVK-QLGMSEA---------DS-----ITLFSSFSALVYGLVAIGGWLGD 82 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHH---------HH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999998888888765 2332221 11 12222333333444456688999
Q ss_pred h-hCchHHHHHHHHHHHHHHHHHHHH
Q 017498 306 W-IGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 306 ~-ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
| +|+|++..++.++++++.+.+.+.
T Consensus 83 r~~G~r~~~~~g~~~~~ig~~l~~~~ 108 (500)
T PRK09584 83 KVLGTKRVIMLGAIVLAIGYALVAWS 108 (500)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHh
Confidence 9 599999999999999887666554
No 120
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=94.20 E-value=1.9 Score=43.89 Aligned_cols=38 Identities=11% Similarity=0.194 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 294 ~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
++.-++.|++.+|+|.|+...++-++.++=.+.+.+..
T Consensus 273 ~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~ 310 (412)
T PF01306_consen 273 ALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT 310 (412)
T ss_dssp HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc
Confidence 33345679999999999998888877777666666554
No 121
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=94.09 E-value=0.32 Score=48.14 Aligned_cols=82 Identities=12% Similarity=0.053 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
|..+.++...|+-+.+|..+.-+.+.|+.+ .++.++. ..| +.+.++++...+.+.+..++.+|+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~~-------------~~g-~~~~~~~l~~~i~~~~~G~l~Dr~g 66 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-VNGLSKT-------------DTG-IVFSCISLFSILFQPLFGLISDKLG 66 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 567888889999999999999898888876 3443332 222 4567788888889999999999999
Q ss_pred chHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMA 325 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~ 325 (370)
+|++...+.+..+++..
T Consensus 67 rr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 67 LKKHLLWIISGLLVLFA 83 (396)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 99999888776655443
No 122
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=94.09 E-value=0.28 Score=46.88 Aligned_cols=84 Identities=8% Similarity=0.002 Sum_probs=62.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
|.++..++++.++..........|+.+ ++.++. .. ++...++.+...+.+.+..++.+|+|+|+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~~-------------~~-g~~~~~~~~~~~i~~~~~G~l~dr~g~r~ 65 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLA--GTGSAS-------------VL-SLAALAGMLPYVVLSPIAGALADRYDRKK 65 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHH--hhccHH-------------HH-HHHHHHHHHHHHHHHHhhhHHHHhhchhH
Confidence 457788888888887777766666554 222211 22 34456777788888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017498 312 VWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 312 v~~~s~~i~a~~~~~~~~~~ 331 (370)
++.++.++.+++.+...+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~ 85 (365)
T TIGR00900 66 VMIGADLIRAVLVAVLPFVA 85 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887766664
No 123
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=94.09 E-value=0.41 Score=49.59 Aligned_cols=90 Identities=4% Similarity=0.012 Sum_probs=63.7
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 226 ~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
+.||.++.++.++++.=++++.+.-+...|+-++ ++-+. ....+....|.....+...+-.++.+
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-lg~~~--------------~~a~~i~~~~~~~~~~~~~~~G~laD 75 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-LGFSQ--------------EQAFITFGAFAALVYGLISIGGYVGD 75 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH--------------HHHHHHHHHHHHHHHHHHhhHHHhhh
Confidence 4899999999999877677776666666666552 22111 11134444555555555566788999
Q ss_pred h-hCchHHHHHHHHHHHHHHHHHHHH
Q 017498 306 W-IGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 306 ~-ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
| +|+|+++.++.++++++.+.+.+.
T Consensus 76 r~~G~r~~~~~g~~~~~~g~~~~~~~ 101 (489)
T PRK10207 76 HLLGTKRTIVLGAIVLAIGYFMTGMS 101 (489)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHh
Confidence 8 999999999999999988777654
No 124
>PRK10504 putative transporter; Provisional
Probab=94.04 E-value=0.43 Score=48.35 Aligned_cols=85 Identities=8% Similarity=-0.045 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~ 309 (370)
..+.++...|+..+....+......+..+ ++.++. .. .+....+.+...+...+..++.+|+|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~~-------------~~-~~~~~~~~~~~~~~~~~~g~l~d~~g~ 74 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS--LGESPL-------------HM-HMVIVSYVLTVAVMLPASGWLADRVGV 74 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH--hCcCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 45667777777766665555555554433 433321 11 244556667777778888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 017498 310 RLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~ 330 (370)
|++...+.++++++.+...+.
T Consensus 75 r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 75 RNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988887665543
No 125
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=93.99 E-value=0.54 Score=45.73 Aligned_cols=86 Identities=13% Similarity=0.050 Sum_probs=58.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~ 309 (370)
.+..+++.++...+.+..+....+.+..+ |+-++. .. .+...++.+...+.+++...+.+|+|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~s~~-------------~~-g~~~~~~~~~~~~~~~~~G~l~Dr~g~ 76 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGE--FGLTTV-------------DA-ASLISAALISRWFGALMFGLWGDRYGR 76 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCChh-------------hH-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34555666666666666666666655443 433321 12 233445666777778888999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 017498 310 RLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|+++.++.++.+++.+.+.+.+
T Consensus 77 r~~~~~~~~~~~~~~~~~~~~~ 98 (405)
T TIGR00891 77 RLPMVTSIVLFSAGTLACGFAP 98 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999988887776654
No 126
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=93.76 E-value=0.32 Score=46.94 Aligned_cols=86 Identities=9% Similarity=0.090 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCch
Q 017498 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 310 (370)
Q Consensus 231 ~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r 310 (370)
.+..|++.+.+-..|+.+..+...++.+ .++-++. .. ++-...+.+...+.+++..++.+|+|+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~-------------~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~r 67 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKD-DLGLSTA-------------QL-GNLVAVPVLAGAVLRIILGFLVDKFGPR 67 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHH-HhCCCHH-------------Hh-hHhhHHHHHHHHHHHHHHHHHHHHhCch
Confidence 4556666666666666666666655554 3443332 11 3445567777888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017498 311 LVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 311 ~v~~~s~~i~a~~~~~~~~~~ 331 (370)
++..++.++.+++.+.+.+.+
T Consensus 68 ~~~~~~~~~~~i~~~~~~~~~ 88 (366)
T TIGR00886 68 YTTTLSLLLLAIPCLWAGLAV 88 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998887776654
No 127
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=93.73 E-value=0.55 Score=46.77 Aligned_cols=87 Identities=8% Similarity=-0.010 Sum_probs=60.2
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017498 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (370)
Q Consensus 227 mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ 306 (370)
|+|..+.+++.++++=++-..+......++.+ ++.++ ..-.|....|.+...+.+.+..++.+|
T Consensus 1 ~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~--------------~~~~~~~~~~~l~~~l~~~~~G~laDr 64 (393)
T PRK11195 1 MSKGFYAIMAAQFFSALADNALLFAAIALLKE--LHYPD--------------WSQPLLQMFFVLAYIVLAPFVGAFADS 64 (393)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcH--------------HHHHHHHHHHHHHHHHHHhhhhHhhhc
Confidence 67788999999999877543333333333322 22211 112455667777888888888999999
Q ss_pred hCchHHHHHHHHHHHHHHHHHHH
Q 017498 307 IGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 307 ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+|+|++...+.++++++.+...+
T Consensus 65 ~grr~vl~~~~~~~~~~~~~~~~ 87 (393)
T PRK11195 65 FPKGRVMFIANGIKLLGCLLMLF 87 (393)
T ss_pred cCCchhhHHHHHHHHHHHHHHHH
Confidence 99999999999999887665544
No 128
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=93.59 E-value=0.68 Score=46.03 Aligned_cols=86 Identities=12% Similarity=0.038 Sum_probs=64.4
Q ss_pred cCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 226 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 226 ~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
..|+.+....+.+++.-++......|.+.+..+ ++.++. .. .+.+..|.+...+.+++..++.+
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~~-------------~~-g~~~~~~~~~~~i~~~~~g~l~d 73 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--LGLSPQ-------------QS-ASAFTLYGIAAAISAWISGVVAE 73 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--hCCCHH-------------Hh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 378889999999998888766555566666633 333321 22 34466788888888899999999
Q ss_pred hhCchHHHHHHHHHHHHHHHHH
Q 017498 306 WIGSRLVWAISNFIVFACMATT 327 (370)
Q Consensus 306 ~ig~r~v~~~s~~i~a~~~~~~ 327 (370)
|+|+|++...+.++.+++++..
T Consensus 74 r~g~k~~l~~~~~~~~~~~~~~ 95 (402)
T TIGR00897 74 IIGPLKTMMIGLLLWCVGHAAF 95 (402)
T ss_pred HcCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887554
No 129
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=93.50 E-value=5.6 Score=40.38 Aligned_cols=53 Identities=19% Similarity=0.280 Sum_probs=40.3
Q ss_pred HHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 43 gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++.++-..+-.+|+..-.|+.++-|++..++=.+....+.++|+++|=.+|+.
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 34445555555666666688999999777777778888999999999988865
No 130
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=93.32 E-value=0.63 Score=44.22 Aligned_cols=81 Identities=10% Similarity=-0.017 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHH
Q 017498 234 VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVW 313 (370)
Q Consensus 234 lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~ 313 (370)
|++++|+..+++..+....+.++.+ -++-++. .. .+....+.+...+.+++..++.+|+|+|++.
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~-------------~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l 65 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAE-ELGLSPS-------------QI-GLLFSAFFLGSALFSPFAGYLSDRFGRRRVL 65 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHC-CSTTTSH-------------CH-HHHHHHHHHHHHHHHHHHHHHHHHS-HHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHH-ccCCCHH-------------HH-HHHHHHHHHHHHHHHHHHHHHHHHcCCeeeE
Confidence 4677788877777776666645544 2443332 11 2345567778888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 017498 314 AISNFIVFACMATTAI 329 (370)
Q Consensus 314 ~~s~~i~a~~~~~~~~ 329 (370)
.++.++.+++.+...+
T Consensus 66 ~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 66 IIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred eehhhhhhhHHHHhhh
Confidence 9999999999544444
No 131
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=93.14 E-value=0.49 Score=47.55 Aligned_cols=49 Identities=20% Similarity=0.183 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 283 s~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.+.+|.+...+..++..++.+|+|+|++...+.++++++.+...+.+
T Consensus 54 ~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~ 102 (413)
T PRK15403 54 PASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT 102 (413)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC
Confidence 4556667777777788888999999999999999999998887766654
No 132
>PRK11663 regulatory protein UhpC; Provisional
Probab=93.06 E-value=0.73 Score=46.45 Aligned_cols=48 Identities=17% Similarity=0.050 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+.+
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 109 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS 109 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh
Confidence 344567777888888999999999999999999999999988777665
No 133
>TIGR00895 2A0115 benzoate transport.
Probab=92.91 E-value=1.4 Score=42.61 Aligned_cols=46 Identities=13% Similarity=0.209 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
...+.+...+.+++..++.+|+|+|++...+.++.+++.+.+.+..
T Consensus 58 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~ 103 (398)
T TIGR00895 58 FSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT 103 (398)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc
Confidence 4456666777788889999999999999999999988887766554
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=92.87 E-value=0.98 Score=45.90 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+.+..+.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+.+
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 106 (496)
T PRK03893 59 SLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAP 106 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 345556667777788889999999999999999999988888777654
No 135
>PRK10489 enterobactin exporter EntS; Provisional
Probab=92.50 E-value=0.3 Score=48.72 Aligned_cols=39 Identities=13% Similarity=0.161 Sum_probs=34.5
Q ss_pred hhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
...+++.|..|++.|.+++++.+.+..+|+.+|..+++.
T Consensus 332 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 332 LQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 345789999999999999999999999999999888765
No 136
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=92.39 E-value=0.84 Score=46.00 Aligned_cols=87 Identities=13% Similarity=0.192 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG- 308 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig- 308 (370)
.-.+||...|+-|.+|-.+.-|.+.|+.++ ++-++ .+.| +-+..+++...+.+.+..++.+|+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~s~-------------~~iG-l~~a~~~~~~~i~~~~~g~l~dr~g~ 67 (418)
T TIGR00889 3 TTAKLKFMSFLQWFIWGSWLVTLGSYMSKT-LHFSG-------------AEIG-WVYSSTGIAAILMPILVGIIADKWLS 67 (418)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH-------------HHHH-HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 345677777777666666666667776552 22111 1344 3356777888888999999999985
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 017498 309 SRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+|++..+++++.++++....+.+
T Consensus 68 ~r~~~~~~~~~~~~~~~~~~~~~ 90 (418)
T TIGR00889 68 AQKVYAVCHFAGALLLFFAAQVT 90 (418)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc
Confidence 47788888888877776666554
No 137
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=92.24 E-value=5.7 Score=41.23 Aligned_cols=48 Identities=15% Similarity=0.060 Sum_probs=37.7
Q ss_pred HHhhcccccch-hhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcc
Q 017498 46 LLDLANNTVQG-PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG 93 (370)
Q Consensus 46 llD~s~n~~q~-P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G 93 (370)
..+.-.+.+-. -+=+++-|++.++|-.|=+...+..+.+|.++|-.+.
T Consensus 137 ~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~ 185 (472)
T TIGR00769 137 MAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTI 185 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34454555554 6778999999999999999999999999988886543
No 138
>PRK11043 putative transporter; Provisional
Probab=91.86 E-value=1.7 Score=42.81 Aligned_cols=86 Identities=9% Similarity=0.088 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhhcccc--ccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 231 MHVVLIVMALTWLSWFPFFLFDTDW--MGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 231 ~~~lc~vqffsW~g~f~f~~y~T~~--vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
++.+++....++.++++.-.|...+ +.+ -++-++. .. .+.+.++.+...+.+++..++.+|+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~-~~~~s~~-------------~~-g~~~s~~~~~~~~~~~~~g~l~dr~g 69 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQA-DLQTSAS-------------AV-SASLSLFLAGFALGQLLWGPLSDRYG 69 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HHCCCHH-------------HH-HHHHHHHHHHHHHHHHhhhhHHhhcC
Confidence 5566666666777766666666544 222 1221111 12 23455666677778888899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHh
Q 017498 309 SRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+|++...+.++.+++.+.+.+..
T Consensus 70 ~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 70 RKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999998888877766543
No 139
>PRK03699 putative transporter; Provisional
Probab=91.82 E-value=1.4 Score=43.57 Aligned_cols=46 Identities=11% Similarity=0.013 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
...+.+...+.+++..++.+|+|+|++...+.++.+++.+.+.+.+
T Consensus 48 ~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~ 93 (394)
T PRK03699 48 FTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH 93 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4455666667777889999999999999999999888887776653
No 140
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=91.76 E-value=9.7 Score=39.28 Aligned_cols=74 Identities=19% Similarity=0.127 Sum_probs=44.7
Q ss_pred CCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCCC
Q 017498 66 SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLT 145 (370)
Q Consensus 66 ~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~~ 145 (370)
.|++||..|++..++-+-+|..+|++++-+. .|-..+. ....-.+..+|+....+-.+-+.++++..+|+|..
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppil-----V~~~~~~--~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPIL-----VPSSKDS--EDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhcccee-----cCCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 4889999999999888889999999998762 1211010 00111333344434334444446666777887654
Q ss_pred C
Q 017498 146 V 146 (370)
Q Consensus 146 ~ 146 (370)
|
T Consensus 242 P 242 (480)
T KOG2563|consen 242 P 242 (480)
T ss_pred C
Confidence 4
No 141
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=91.72 E-value=0.76 Score=44.01 Aligned_cols=48 Identities=15% Similarity=0.162 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+-...+.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+..
T Consensus 34 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 34 LLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh
Confidence 334566777777888889999999999999999999999988877765
No 142
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=91.70 E-value=1.2 Score=43.99 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 283 s~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.+..+.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+.+
T Consensus 51 ~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 99 (406)
T PRK15402 51 PTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ 99 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3446677777888888899999999999999999999888877766554
No 143
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=91.37 E-value=1.7 Score=42.76 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+.+..+.+...+.+.+..++.+|+|+|++..++.++.+++.+.+.+.+
T Consensus 47 ~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 94 (394)
T PRK11652 47 AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH 94 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 445567777777888889999999999999999999888887766543
No 144
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=91.14 E-value=2 Score=41.53 Aligned_cols=48 Identities=21% Similarity=0.239 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.+++..++.+|+|+|++...+.++.+++.+.+.+.+
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 91 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN 91 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 445566777777788889999999999999999999988888777654
No 145
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=91.06 E-value=1.7 Score=43.86 Aligned_cols=48 Identities=15% Similarity=0.142 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|....|.+...+...+..++.+|+|+|+++.++.++++++.+...+.+
T Consensus 41 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 88 (485)
T TIGR00711 41 WVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAP 88 (485)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcC
Confidence 556678888888888899999999999999999999988887665543
No 146
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=91.00 E-value=1.7 Score=44.06 Aligned_cols=48 Identities=19% Similarity=0.275 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+.+..+.+...+.+.+..++.+|+|+|++...+.++.+++++.+.+..
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~ 114 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVP 114 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhh
Confidence 345567777777888899999999999999999999998887776653
No 147
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=90.98 E-value=1.8 Score=44.40 Aligned_cols=46 Identities=15% Similarity=0.172 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
...+.+...+..++..++.+|+|+|++..++.++.+++++.+.+.+
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 122 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVS 122 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555666677888999999999999999999988887777654
No 148
>PRK12307 putative sialic acid transporter; Provisional
Probab=90.96 E-value=2.4 Score=42.07 Aligned_cols=48 Identities=10% Similarity=-0.028 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+...++.+...+.+++..++.+|+|+|++..++.++.+++.+...+.+
T Consensus 57 ~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 104 (426)
T PRK12307 57 FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS 104 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh
Confidence 334456666777788889999999999999999999999988777765
No 149
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=90.74 E-value=1.1 Score=44.43 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 282 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 282 Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
..+....+.+...+.+.+..++.+|+|+|++...+.++++++++.+.+.+
T Consensus 46 ~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~ 95 (393)
T PRK09705 46 AALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP 95 (393)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc
Confidence 34556677777788888899999999999999999999999999888775
No 150
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=90.52 E-value=0.84 Score=43.67 Aligned_cols=48 Identities=17% Similarity=0.043 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.+++..++.+|+|+|+++.++.++.+++.+.+.+.+
T Consensus 42 ~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~ 89 (377)
T TIGR00890 42 IWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD 89 (377)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH
Confidence 445677777888888889999999999999999999999988877765
No 151
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=90.31 E-value=1.5 Score=45.63 Aligned_cols=86 Identities=10% Similarity=0.107 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017498 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (370)
Q Consensus 227 mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ 306 (370)
.|+.++.++.++++..++++.+..+...|+-+. ++-++. ..+ ..+..|.+...+.+++-..+.+|
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-lgls~~-------------~a~-~i~~~~~~~~~l~~ligG~LaDR 71 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-LKYDDN-------------HAY-ELFSAYCSLVYVTPILGGFLADK 71 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999999998888888887652 221111 122 23556666667777788899999
Q ss_pred h-CchHHHHHHHHHHHHHHHHH
Q 017498 307 I-GSRLVWAISNFIVFACMATT 327 (370)
Q Consensus 307 i-g~r~v~~~s~~i~a~~~~~~ 327 (370)
+ |+|++..++.++.+++.+..
T Consensus 72 ilGrrr~iliG~il~~lg~lll 93 (493)
T PRK15462 72 VLGNRMAVMLGALLMAIGHVVL 93 (493)
T ss_pred ccCcHHHHHHHHHHHHHHHHHH
Confidence 8 99999999998888776543
No 152
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=90.18 E-value=0.68 Score=45.62 Aligned_cols=74 Identities=15% Similarity=0.134 Sum_probs=49.9
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+.........+++.|.+|+++|.++.++.+....+|+.++..+.+.. .+ .. ..+..|.+.+++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l-~~-~~-------------g~~~~~~~~~~~~~ 379 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLV-AS-WF-------------GYPSIFLAAALAAL 379 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-Hc-------------CHHHHHHHHHHHHH
Confidence 33334444567788999999999999999999999987765544331 11 11 25677777777777
Q ss_pred HHhhheeeE
Q 017498 130 LCALVTIYF 138 (370)
Q Consensus 130 itv~~T~~~ 138 (370)
+++++..+.
T Consensus 380 ~~~~~~~~~ 388 (399)
T PRK05122 380 LGLALTWLL 388 (399)
T ss_pred HHHHHHHHh
Confidence 776665544
No 153
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=89.75 E-value=0.49 Score=47.84 Aligned_cols=78 Identities=15% Similarity=0.273 Sum_probs=54.8
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHH-HHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSW-MAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~-~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~ 134 (370)
...-.|+.+.+|++.|.++.++.+.+ .|+|+++|..+|+. -+++ ++... --+...++.+.+++.++.+++
T Consensus 320 ~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~-l~~~-~g~~~-------~~~~~~~~~v~a~~~~~~~~~ 390 (400)
T PF03825_consen 320 AASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW-LYDA-FGARG-------MFDWSAVFLVFAVMALVILVL 390 (400)
T ss_pred HHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH-HHHH-hcchh-------hhhHHHHHHHHHHHHHHHHHH
Confidence 35557899999999999999987764 79999999999876 2332 22110 013456677777776676666
Q ss_pred eeeEeecc
Q 017498 135 TIYFADEV 142 (370)
Q Consensus 135 T~~~v~E~ 142 (370)
-++..||+
T Consensus 391 f~~~fk~~ 398 (400)
T PF03825_consen 391 FVILFKPK 398 (400)
T ss_pred HHhhccCC
Confidence 67777875
No 154
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=89.50 E-value=3.1 Score=40.92 Aligned_cols=48 Identities=15% Similarity=0.046 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+-...+.+...+.+++..++.+|+|+|++...+.++.+++.+.+.+.+
T Consensus 54 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 101 (406)
T PRK11551 54 WAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW 101 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc
Confidence 445566667777788889999999999999999998888877666654
No 155
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=89.43 E-value=0.45 Score=48.94 Aligned_cols=43 Identities=23% Similarity=0.161 Sum_probs=38.9
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
....|.-+++++.||++++..++++.+.+.++|+.+|..+|++
T Consensus 367 ~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~ 409 (468)
T TIGR00788 367 LKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVL 409 (468)
T ss_pred HHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778999999999999999999999999999999998876
No 156
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=89.03 E-value=1.4 Score=35.45 Aligned_cols=43 Identities=19% Similarity=0.074 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
.+++...+.+.+..++.+|+|+|++...+.++.+++++.+.+.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~ 48 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS 48 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh
Confidence 3455666777788899999999999999998888887766554
No 157
>TIGR00893 2A0114 d-galactonate transporter.
Probab=88.99 E-value=1.1 Score=42.85 Aligned_cols=69 Identities=17% Similarity=0.140 Sum_probs=50.0
Q ss_pred cccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 017498 52 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (370)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~it 131 (370)
.....+..+++.|..|+++|.++.++.+...++|+.+|-.+.+.. .+. . ++.+..|.+.+++.+++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l-~~~-~------------g~~~~~~~~~~~~~~~~ 391 (399)
T TIGR00893 326 LGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAI-AAT-T------------GSFAGALMVVAALALIG 391 (399)
T ss_pred hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhh-ccC-C------------CchhHHHHHHHHHHHHH
Confidence 335778889999999999999999999999999999998776541 111 1 12455666666665555
Q ss_pred hhh
Q 017498 132 ALV 134 (370)
Q Consensus 132 v~~ 134 (370)
.++
T Consensus 392 ~~~ 394 (399)
T TIGR00893 392 ALS 394 (399)
T ss_pred HHH
Confidence 444
No 158
>PRK09952 shikimate transporter; Provisional
Probab=88.76 E-value=3.9 Score=41.29 Aligned_cols=91 Identities=7% Similarity=0.113 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
...++..++-|+-.+.+-+.....++++-|.+..+ .+|.-.+.....+.-+...+.+++...+.+|+|||+
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~ 95 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSP---------AMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKR 95 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHH
Confidence 33444555556655555555455566544433211 122211111111111234455677889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 017498 312 VWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 312 v~~~s~~i~a~~~~~~~~~~ 331 (370)
+..++.++++++.+.+.+.+
T Consensus 96 ~l~~~~~~~~~~~~~~~~~~ 115 (438)
T PRK09952 96 MLMLTVWMMGIATALIGLLP 115 (438)
T ss_pred HHHHHHHHHHHHHHHHhcCC
Confidence 99999999999988888775
No 159
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=88.63 E-value=15 Score=37.52 Aligned_cols=71 Identities=8% Similarity=0.083 Sum_probs=49.1
Q ss_pred cchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhh
Q 017498 54 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 133 (370)
Q Consensus 54 ~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~ 133 (370)
.....-+||=-++|+++-+++-++...-.=+|..+|+++|=+. ..+- ..+++.++.++.....++++
T Consensus 110 ~evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQll-----vs~~--------~~sy~~L~~isl~~~~~a~~ 176 (412)
T PF01770_consen 110 AEVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLL-----VSFG--------GVSYFQLNYISLASVSLALL 176 (412)
T ss_pred HHHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHhc--------CCCHHHHHHHHHHHHHHHHH
Confidence 4456678898999998888888877766777777777777431 1111 13577788888777777777
Q ss_pred heee
Q 017498 134 VTIY 137 (370)
Q Consensus 134 ~T~~ 137 (370)
++++
T Consensus 177 ~~~f 180 (412)
T PF01770_consen 177 IALF 180 (412)
T ss_pred HHHH
Confidence 6665
No 160
>PRK03545 putative arabinose transporter; Provisional
Probab=88.62 E-value=1.4 Score=43.36 Aligned_cols=48 Identities=13% Similarity=0.058 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.++....+.+|+|+|+++.++.++.+++.+.+.+.+
T Consensus 48 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 95 (390)
T PRK03545 48 LMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW 95 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc
Confidence 444566666777777888999999999999999999999988877765
No 161
>PRK09528 lacY galactoside permease; Reviewed
Probab=88.62 E-value=2.5 Score=42.08 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+..+.+.+..|+.+++|-.+.-|.+.|..+ .++-++. ..| +...++.+...+.+.+..++.+|+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~~-------------~~g-~~~s~~~l~~~i~~~~~G~l~Dr~g 74 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHD-INGLSGT-------------DTG-IIFSANSLFALLFQPLYGLISDKLG 74 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 466777777888888776667777777665 2332321 222 3456777888888899999999999
Q ss_pred chHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACM 324 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~ 324 (370)
+|++..++..+.++++
T Consensus 75 ~r~~~~~~~~~~~~~~ 90 (420)
T PRK09528 75 LKKHLLWIISGLLVLF 90 (420)
T ss_pred chHHHHHHHHHHHHHH
Confidence 9999888776655544
No 162
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=88.09 E-value=3.2 Score=42.26 Aligned_cols=47 Identities=15% Similarity=0.055 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+-...|.+...+..++...+.+|+|+|++..++.++.+++.+.+.+.
T Consensus 68 ~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~ 114 (467)
T PRK09556 68 MIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGAS 114 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHH
Confidence 33445677777778888899999999999999999888877666553
No 163
>TIGR00898 2A0119 cation transport protein.
Probab=87.70 E-value=1.9 Score=43.98 Aligned_cols=49 Identities=16% Similarity=0.112 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 283 s~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+...++.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+.+
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~ 178 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP 178 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc
Confidence 4556677777788888899999999999999999999988887777654
No 164
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=87.31 E-value=5.3 Score=39.98 Aligned_cols=48 Identities=15% Similarity=-0.019 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.+++..++.+|+|+|++...+.++++++.+.+.+.+
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~ 94 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT 94 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc
Confidence 334456666677777888999999999999999999999988887765
No 165
>PRK12382 putative transporter; Provisional
Probab=86.96 E-value=1.2 Score=43.70 Aligned_cols=74 Identities=12% Similarity=0.060 Sum_probs=51.9
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 129 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~ 129 (370)
+......+.-+.+.|.+|+++|.+++++.+....+|+.+|..+++.. .+ .. ..+..|.+.+++.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l-~~-~~-------------g~~~~~~~~~~~~~ 379 (392)
T PRK12382 315 GCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGML-AT-SF-------------GYPSVFLAGAISAV 379 (392)
T ss_pred HHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-Hh-------------CchHHHHHHHHHHH
Confidence 33334445667889999999999999999999999999988776541 11 11 24667777777666
Q ss_pred HHhhheeeE
Q 017498 130 LCALVTIYF 138 (370)
Q Consensus 130 itv~~T~~~ 138 (370)
++.++....
T Consensus 380 ~~~~~~~~~ 388 (392)
T PRK12382 380 LGIIVTILS 388 (392)
T ss_pred HHHHHHHhh
Confidence 666655433
No 166
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=86.90 E-value=4.3 Score=41.31 Aligned_cols=46 Identities=15% Similarity=0.070 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
..++.+...+...+..++.+|+|+|++.+++.++++++.+...+..
T Consensus 60 ~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 105 (455)
T TIGR00892 60 SSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS 105 (455)
T ss_pred HHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh
Confidence 4445555556667788999999999999999999988887776654
No 167
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=86.76 E-value=1.7 Score=44.15 Aligned_cols=73 Identities=23% Similarity=0.322 Sum_probs=56.5
Q ss_pred ccchhhHHHHhcCCCch-hhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHH
Q 017498 53 TVQGPARALLADLSGPD-QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 131 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~-qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~it 131 (370)
.....--|+++|..|+| +|+++.++.=-+.++|-++|.-.|++ +.+..+ .++-|++.++++++-
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGi--lYe~~G-------------k~aPFlVL~~v~Lld 239 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGI--LYEFAG-------------KSAPFLVLAIVLLLD 239 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccc--hHhhcC-------------CcCcHHHHHHHHHHH
Confidence 34455678999999884 56899999999999999999999988 333322 356688888888888
Q ss_pred hhheeeEee
Q 017498 132 ALVTIYFAD 140 (370)
Q Consensus 132 v~~T~~~v~ 140 (370)
..+-++.++
T Consensus 240 ~~L~l~vi~ 248 (464)
T KOG3764|consen 240 GALQLLVIE 248 (464)
T ss_pred HHHHHheeC
Confidence 887777764
No 168
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=86.75 E-value=8.5 Score=40.23 Aligned_cols=69 Identities=14% Similarity=0.254 Sum_probs=52.4
Q ss_pred hhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 017498 57 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (370)
Q Consensus 57 P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~ 136 (370)
.+-.++....|+++|++++++...-..+|.+++..++.. ... +++ ..++.+.+|+....++++++.+
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql--l~s-~gW----------r~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL--LVT-LGW----------ISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHh-cCc----------hhHHHHHHHHHHHHHHHHHHHH
Confidence 556789999999999999999999999999999988754 111 111 2467778787777777777766
Q ss_pred eE
Q 017498 137 YF 138 (370)
Q Consensus 137 ~~ 138 (370)
+.
T Consensus 201 ~L 202 (511)
T TIGR00806 201 FL 202 (511)
T ss_pred hC
Confidence 64
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=86.36 E-value=2.9 Score=41.63 Aligned_cols=48 Identities=10% Similarity=0.083 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+.+.+..++.+|+|+|+++..+.++++++.+...+.+
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 106 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN 106 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC
Confidence 334566777777888889999999999999999999999887766654
No 170
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=86.35 E-value=3.3 Score=41.63 Aligned_cols=46 Identities=2% Similarity=-0.270 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+-...+.+...+.++...++.+|+|+|++..++.++++++.+....
T Consensus 42 ~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~ 87 (410)
T TIGR00885 42 LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWP 87 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHH
Confidence 4455677788888899999999999999999999999988866543
No 171
>PRK15075 citrate-proton symporter; Provisional
Probab=86.27 E-value=8.6 Score=38.61 Aligned_cols=90 Identities=11% Similarity=0.117 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCc
Q 017498 231 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN-SVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 231 ~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~-siv~~l~s~il~~l~~~ig~ 309 (370)
+-.+++..|+.++-...+-++.+.. .++ |+.++. +.+.-..+...... .+...+.+++...+.+|+|+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i-~~~-~~~~~~---------~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr 85 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAI-AKT-FFPAGN---------EFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGR 85 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hCCCCC---------chHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhch
Confidence 3445566666666666666555543 332 433322 11211111111111 11223456777899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHh
Q 017498 310 RLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 310 r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|+++..+.++++++.+.+.+.+
T Consensus 86 r~~l~~~~~~~~~~~~l~~~~~ 107 (434)
T PRK15075 86 RKGLIVTLSIMASGTLLIAFVP 107 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999988888765
No 172
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=85.53 E-value=4.9 Score=35.29 Aligned_cols=46 Identities=11% Similarity=0.191 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHH
Q 017498 281 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMAT 326 (370)
Q Consensus 281 ~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~ 326 (370)
.|..++.+.-.+..+.+++-|.+++++|.|...++|.+.+++-.++
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~ 83 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS 83 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 3566666666678888889999999999999999999988755544
No 173
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=85.45 E-value=4.5 Score=38.81 Aligned_cols=38 Identities=8% Similarity=0.135 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 294 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 294 ~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.+++..++.+|+|+|+++.++.++.+++.+.+.+..
T Consensus 49 ~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 86 (394)
T TIGR00883 49 PLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP 86 (394)
T ss_pred hhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC
Confidence 45667788999999999999999999999888777654
No 174
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=85.43 E-value=8.5 Score=37.75 Aligned_cols=48 Identities=4% Similarity=0.032 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....+.+...+...+..++.+|+|+|++..++.++++++.+...+..
T Consensus 42 ~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~ 89 (392)
T PRK10473 42 IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAE 89 (392)
T ss_pred HHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhC
Confidence 334556666666777888999999999999999999888887766543
No 175
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=84.83 E-value=7.3 Score=37.50 Aligned_cols=79 Identities=15% Similarity=0.037 Sum_probs=49.2
Q ss_pred HHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHH
Q 017498 236 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 315 (370)
Q Consensus 236 ~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~ 315 (370)
+..|+..+++--+.-+.+.|+.+ -++.++. ..| +-+..+.+...+.+.+..++.+|+|+|+.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~-~~g~s~~-------------~~g-~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 68 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSE-EVRARPA-------------MIG-LFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL 68 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHc-ccCCCHH-------------HHH-HHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence 45677777766666666666654 2332221 222 33556677777788888899999999987765
Q ss_pred -HHHHHHHHHHHHHH
Q 017498 316 -SNFIVFACMATTAI 329 (370)
Q Consensus 316 -s~~i~a~~~~~~~~ 329 (370)
+.++.+++.+...+
T Consensus 69 ~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 69 FCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHHh
Confidence 44444445444443
No 176
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=84.69 E-value=3.1 Score=43.65 Aligned_cols=79 Identities=19% Similarity=0.123 Sum_probs=56.4
Q ss_pred HHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHH
Q 017498 43 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 122 (370)
Q Consensus 43 gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~ 122 (370)
.+.+.-++......+..+++-..+|++.+++++++.......|..+|.++++. .-+. . ..+..+.
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~--la~~---~----------g~~~al~ 377 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGF--LADH---F----------GVRTALL 377 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHH---h----------CHHHHHH
Confidence 34445566666778888999999999999999999998888888888877665 1111 1 2455666
Q ss_pred HHHHHHHHHhhhee
Q 017498 123 VAVVFLTLCALVTI 136 (370)
Q Consensus 123 i~ai~l~itv~~T~ 136 (370)
+++++++++.+++.
T Consensus 378 ~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 378 IAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHH
Confidence 67766666666654
No 177
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=84.58 E-value=4.3 Score=45.99 Aligned_cols=88 Identities=11% Similarity=-0.014 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+.++.++++++++-++-..+..-...++-+ .|+.+ +.+ ....+...++.+...+.+++...+..|+|
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----------~~~-~~~~~~~~~~~l~~~l~~~~~G~l~Dr~g 75 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIK-AYDGS-----------EQV-ILTAIVNALFLLPFLLLSSPAGFLADKFS 75 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHH-HcCcc-----------cHH-HHHHHHHHHHHHHHHHHhhhHhhhccccc
Confidence 456777788888766554333333333322 12211 111 22245566777778888888999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHH
Q 017498 309 SRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 309 ~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+|+++.++.++.+++.+.+.+
T Consensus 76 rk~~l~~~~~~~~~~~~~~~~ 96 (1146)
T PRK08633 76 KNRVIRIVKLFEVGLTLLIVL 96 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999998776665555444
No 178
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=84.41 E-value=1.8 Score=42.71 Aligned_cols=69 Identities=10% Similarity=0.008 Sum_probs=48.1
Q ss_pred hHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc-cccccccccccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 017498 58 ARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS-GSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 136 (370)
Q Consensus 58 ~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i-~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~ 136 (370)
..+++.|..|++.|.+++++......+|++++..+.+. .+.. ..+..|.+.+++.+++.++.+
T Consensus 404 ~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~----------------~~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 404 PWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI----------------GVGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred ehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------CccceehhHHHHHHHHHHHHh
Confidence 35677999999999999999999999999888765432 1110 134456666666666666666
Q ss_pred eEeecc
Q 017498 137 YFADEV 142 (370)
Q Consensus 137 ~~v~E~ 142 (370)
+..||.
T Consensus 468 ~~~~~~ 473 (481)
T TIGR00879 468 FFLPET 473 (481)
T ss_pred eecccC
Confidence 667775
No 179
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=83.92 E-value=12 Score=38.26 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 291 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 291 iv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+...+.+++..++.+|+|+|++..++.++++++.+.+.+.+
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~ 108 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP 108 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc
Confidence 44555667788999999999999999999999999888875
No 180
>PRK10133 L-fucose transporter; Provisional
Probab=83.72 E-value=4.2 Score=41.29 Aligned_cols=44 Identities=5% Similarity=-0.212 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATT 327 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~ 327 (370)
+-+..+.+...+.+++..++.+|+|+|++..++.++++++.+..
T Consensus 65 l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~ 108 (438)
T PRK10133 65 LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALF 108 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHH
Confidence 34567888888889999999999999999999999999988664
No 181
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=82.57 E-value=12 Score=38.77 Aligned_cols=45 Identities=20% Similarity=0.023 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
..++.++..+.-+...++++|+|.|++..++.++.++.++.+.+.
T Consensus 76 ~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a 120 (462)
T PRK15034 76 TALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIA 120 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 345556666666777899999999999999999998888877765
No 182
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=81.65 E-value=60 Score=32.46 Aligned_cols=41 Identities=12% Similarity=0.128 Sum_probs=29.8
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHhhhhhhhcccccc
Q 017498 216 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMG 257 (370)
Q Consensus 216 ~~~~l~~si~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vg 257 (370)
.+++-++.+++ -+.+..+.++|.+==.+...|.+.=|.-..
T Consensus 232 ~~~~a~~~i~~-d~ril~LG~~qslFE~smy~FVflWtPaL~ 272 (354)
T PF05631_consen 232 SFREAWRAILS-DPRILLLGLIQSLFEGSMYLFVFLWTPALD 272 (354)
T ss_pred HHHHHHHHHHc-CchhHHHHHHHHHHHHHHHHheeeeeceec
Confidence 45666666664 567889999999887777777777776553
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=80.80 E-value=6 Score=40.69 Aligned_cols=49 Identities=10% Similarity=0.080 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 283 s~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.|....|.+...+..+...++.+|+|+|+++..+.++++++.+...+.+
T Consensus 44 ~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~ 92 (495)
T PRK14995 44 LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP 92 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 4666677777777777888999999999999999999998887766554
No 184
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=80.53 E-value=8.7 Score=38.68 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+....+.+...+.+++..++.+|+|+|+++.++.++++++.+.+.+
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~ 104 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAW 104 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHh
Confidence 5566778888888999999999999999999999999888877665
No 185
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=80.35 E-value=13 Score=37.61 Aligned_cols=84 Identities=12% Similarity=0.199 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-Cch
Q 017498 232 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSR 310 (370)
Q Consensus 232 ~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~i-g~r 310 (370)
.||+..+|+-|+.|-.+.-|.+.|..+.=| + +.+.|.. +.+-.++..+...+...+.+|. .+|
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~--s-------------~~qIG~l-~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGF--S-------------GTQIGIL-LAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCC--C-------------HHHHHHH-HHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 466777777777777766677777665222 1 2245554 4445566666667777788775 578
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 017498 311 LVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 311 ~v~~~s~~i~a~~~~~~~~~~ 331 (370)
++..+.+++.++.++...+..
T Consensus 69 ~~l~~~~l~~~~~~~~~~~~~ 89 (400)
T PF03825_consen 69 RILALLSLLSALALLLLAFSS 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 899999999888887666543
No 186
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=80.19 E-value=5.8 Score=38.43 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
....+.+...+..++..++.+|+|+|++...+.++.+++.+...+..
T Consensus 31 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~ 77 (377)
T PRK11102 31 TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ 77 (377)
T ss_pred HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 34556666777778888999999999999999999988887776654
No 187
>PRK15011 sugar efflux transporter B; Provisional
Probab=79.92 E-value=16 Score=35.97 Aligned_cols=89 Identities=15% Similarity=-0.021 Sum_probs=53.8
Q ss_pred CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017498 227 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 306 (370)
Q Consensus 227 mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ 306 (370)
+-++-+.+.+..|++.++..-+.-+...|+.+ -++-++. ..|. ....+.+...+.+.+...+.+|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~-~~~~s~~-------------~~g~-~~~~~~~~~~~~~~~~~~~~dr 77 (393)
T PRK15011 13 FDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD-EVHARPA-------------MVGF-FFTGSAVIGILVSQFLAGRSDK 77 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCCHH-------------HHHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 34566777888999999988777777777654 2332221 2222 1223445555566565566888
Q ss_pred hCchHHH-HHHHHHHHHHHHHHHHH
Q 017498 307 IGSRLVW-AISNFIVFACMATTAII 330 (370)
Q Consensus 307 ig~r~v~-~~s~~i~a~~~~~~~~~ 330 (370)
+|+|+.+ ..+.++.+++.+...+.
T Consensus 78 ~g~r~~~~~~~~~~~~~~~~~~~~~ 102 (393)
T PRK15011 78 RGDRKSLIVFCCLLGVLACTLFAWN 102 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHh
Confidence 8998875 45566655655544443
No 188
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=79.19 E-value=10 Score=36.63 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHH
Q 017498 283 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATT 327 (370)
Q Consensus 283 s~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~ 327 (370)
.+...++.+...+.+++..++.+|+|+|++..++.++.+++.+..
T Consensus 38 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 82 (355)
T TIGR00896 38 GLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR 82 (355)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 455667788888888999999999999999999988877766544
No 189
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=78.81 E-value=6.6 Score=40.47 Aligned_cols=60 Identities=18% Similarity=0.150 Sum_probs=47.2
Q ss_pred hHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 272 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 272 ~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.+.+....-.++..+|-+-..+-+++...+..++|||.++.+++++++++-+.+.+.+
T Consensus 110 ~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~ 169 (521)
T KOG0255|consen 110 WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP 169 (521)
T ss_pred hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC
Confidence 344444444555666677777777788888999999999999999999999988888876
No 190
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=77.01 E-value=71 Score=32.76 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 35 RAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 35 ~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
+...+....+.+|+|-+-+-....-+.-.-+..+++-+.|+.-++ +|--.||++|+.
T Consensus 131 p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~----Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 131 PNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQS----VGQTAGYFLGNV 187 (510)
T ss_pred cchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHH----HHHhhhHHhhcc
Confidence 444445556677777666666666777888899998887777665 555566666554
No 191
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=76.85 E-value=1.2e+02 Score=33.00 Aligned_cols=92 Identities=16% Similarity=0.158 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHhhcccccchhhHHHHhcCCCchh---hhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcc
Q 017498 37 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ---RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAA 113 (370)
Q Consensus 37 I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~q---q~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~ 113 (370)
..+..+|+.+.-.++-.+-...-|+..|-.+++| +..++.|+-..+++|+.++..+-.+. -.+...+ +..
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l-~~~~~~f-g~~----- 157 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPIL-RGDVGCF-GCQ----- 157 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhccc-ccC-----
Confidence 3445567777777887788888899999987644 55777777778888888775443220 0000000 000
Q ss_pred cchhHHHHHHHHHHHHHHhhhee
Q 017498 114 CGNLKAAFLVAVVFLTLCALVTI 136 (370)
Q Consensus 114 ~~q~k~~f~i~ai~l~itv~~T~ 136 (370)
.-....|.+.++++++++++-.
T Consensus 158 -~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 158 -DCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred -cchHHHHHHHHHHHHHHHHHHH
Confidence 1256788888888887776543
No 192
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=76.57 E-value=6.6 Score=38.57 Aligned_cols=92 Identities=17% Similarity=0.324 Sum_probs=60.8
Q ss_pred ccCCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 017498 225 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 304 (370)
Q Consensus 225 ~~mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~ 304 (370)
++--+++|.+.+..++=..+||||..-.-.|.-+ =|+-.|. ..|..--.+|- ++++.|-+...+.
T Consensus 260 ~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~-rfGlS~~-------------~a~~i~s~vy~-Isav~spvfg~i~ 324 (459)
T KOG4686|consen 260 NTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQK-RFGLSAV-------------SAGNILSTVYG-ISAVLSPVFGAIS 324 (459)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhCCChh-------------hccchhhhhhh-hhhhhhhhHHHhH
Confidence 3355678888888888899999997654444333 2332222 11122223444 3555566677888
Q ss_pred hhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 305 RWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 305 ~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.|.|++..|..+-.+..+.--++++++
T Consensus 325 Dk~G~n~~wv~~a~~~tl~~H~~l~Ft 351 (459)
T KOG4686|consen 325 DKYGFNLWWVASACILTLLGHSGLFFT 351 (459)
T ss_pred hhhcceehhHHHHHHHHHHHhhhHHhh
Confidence 899999999999888887777777776
No 193
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=74.71 E-value=7.5 Score=29.96 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=38.5
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhheeeEeeccCC
Q 017498 69 DQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 144 (370)
Q Consensus 69 ~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~T~~~v~E~p~ 144 (370)
+-|.++.-+......+++++++.+|++ . ++++..+++-++.++++.+ +.+|.-|.
T Consensus 4 ~gQ~~ae~l~~~il~~~~iisfi~Gy~-----------~-------q~~~~~~~~~~~g~~~~~l---v~vP~Wp~ 58 (76)
T PF06645_consen 4 KGQRLAEKLMQYILIISAIISFIVGYI-----------T-------QSFSYTFYIYGAGVVLTLL---VVVPPWPF 58 (76)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH-----------H-------HHHHHHHHHHHHHHHHHHh---heeCCcHh
Confidence 457888999999999999999999965 1 2566666655555555444 35677655
No 194
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=74.65 E-value=66 Score=33.86 Aligned_cols=71 Identities=11% Similarity=0.234 Sum_probs=41.4
Q ss_pred hHHHHHHHhcc---CCHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHH
Q 017498 216 VLVNLLTSLRH---LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 292 (370)
Q Consensus 216 ~~~~l~~si~~---mP~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv 292 (370)
..++.|+.+.+ + |++|.++++++.+=+| |..+. ....-++-|+|+.---+++ .++.
T Consensus 263 ~i~~~Y~~l~~ilkL-p~V~~li~ilL~~Kig----------------F~a~d--a~T~LKLlEkG~~KE~LAl--~~li 321 (544)
T PF13000_consen 263 SIKDVYKSLWKILKL-PNVQTLIIILLTAKIG----------------FQAND--AVTSLKLLEKGLSKEDLAL--LVLI 321 (544)
T ss_pred hHHHHHHHHHHHHcC-chHHHHHHHHHHHHhc----------------cccch--hhhHHHHHHcCCCHHHhHH--HHHH
Confidence 35555554443 4 4688899998887666 32211 1244678888886555444 2344
Q ss_pred HHHHHHHHHHHHhhh
Q 017498 293 LGVSSFLIEPMCRWI 307 (370)
Q Consensus 293 ~~l~s~il~~l~~~i 307 (370)
-+-+.+++|.++-|+
T Consensus 322 ~~P~qii~~~~~~Kw 336 (544)
T PF13000_consen 322 DFPFQIILPYYIGKW 336 (544)
T ss_pred hhhHHHHHHHHhhhh
Confidence 555566666665543
No 195
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=74.63 E-value=11 Score=37.78 Aligned_cols=47 Identities=19% Similarity=0.299 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+....+.+...+.+++..++.+|+|+|++..++.++.+++.+.+.+.
T Consensus 65 ~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~ 111 (438)
T TIGR00712 65 FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFV 111 (438)
T ss_pred HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcc
Confidence 44556667777778888999999999999999999988887766544
No 196
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=74.17 E-value=23 Score=35.42 Aligned_cols=39 Identities=13% Similarity=0.099 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 293 ~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
..+.+++...+.+|+|||++...+.++++++.+.+.+..
T Consensus 76 ~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~ 114 (432)
T PRK10406 76 RPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP 114 (432)
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC
Confidence 346677888999999999999999999988888876644
No 197
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=74.04 E-value=7.9 Score=31.02 Aligned_cols=64 Identities=19% Similarity=0.256 Sum_probs=40.1
Q ss_pred ccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 53 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 53 ~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
+++.|.|-+..-+== .-|.+|--|+.+..-+|+++|+..|+. . .|+++.-++..+-++++.
T Consensus 4 ~l~~~~~kL~~~iDf-~gQkkaEr~~q~ilti~aiVg~i~Gf~---~---------------Qqls~tvy~vg~~~v~t~ 64 (101)
T KOG4112|consen 4 ILQDVQRKLVFPIDF-PGQKKAERFQQLILTIGAIVGFIYGFA---Q---------------QQLSVTVYIVGAGFVFTL 64 (101)
T ss_pred HHHHHHHhCCCcccC-cchHHHHHHHHHHHHHHHHHHHHHHHH---H---------------HHHHHHHHHHHHHHHHHH
Confidence 345555555433222 235688889999999999999998853 1 256665555444555555
Q ss_pred hhe
Q 017498 133 LVT 135 (370)
Q Consensus 133 ~~T 135 (370)
++|
T Consensus 65 li~ 67 (101)
T KOG4112|consen 65 LIT 67 (101)
T ss_pred Hhc
Confidence 544
No 198
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=73.35 E-value=6.4 Score=40.84 Aligned_cols=78 Identities=19% Similarity=0.285 Sum_probs=57.7
Q ss_pred hcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhc-ccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 49 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSA-GASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~-G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
++.-..|+-+|+++.+++|++|...-++.+++..=..+++|-++ |.+.++. ++.|..+....++
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t---------------g~~r~g~~~l~~l 456 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT---------------GSQRYGFLFLLVL 456 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------CCchhHHHHHHHH
Confidence 56667899999999999999999999999999888888888654 3332211 2467777767777
Q ss_pred HHHHhhheeeEeecc
Q 017498 128 LTLCALVTIYFADEV 142 (370)
Q Consensus 128 l~itv~~T~~~v~E~ 142 (370)
+++..++- ..++++
T Consensus 457 f~~gl~ll-~~v~~~ 470 (477)
T PF11700_consen 457 FLIGLILL-FFVDVE 470 (477)
T ss_pred HHHHHHHH-hhccch
Confidence 77776644 556654
No 199
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=73.00 E-value=4.1 Score=46.42 Aligned_cols=49 Identities=22% Similarity=0.032 Sum_probs=41.4
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
+-++....+.|..+++.+.+|+++++++++..+.+..+|..+|.++++.
T Consensus 344 ~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~ 392 (1140)
T PRK06814 344 LAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILAL 392 (1140)
T ss_pred HHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 3345555667899999999999999999999999999999999887665
No 200
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=72.58 E-value=17 Score=37.52 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
|-...+++.+.+.+++..++.+++|||+.+.++.+++.++-+.+.+.+
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~ 140 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP 140 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 334467778888999999999999999999999999999999888876
No 201
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=70.39 E-value=20 Score=37.59 Aligned_cols=44 Identities=16% Similarity=0.242 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 288 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 288 ~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+...+..+.+.+-..+++|+|.|.+-+.+=++.+++++...|.+
T Consensus 89 l~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~ 132 (509)
T KOG2504|consen 89 LLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFAT 132 (509)
T ss_pred HHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHh
Confidence 33344445555566789999999999999999999999999998
No 202
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=69.83 E-value=16 Score=37.54 Aligned_cols=47 Identities=9% Similarity=0.060 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+-...+.+...+.+++..++.+|+|||++..++.++++++.+.+.+.
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~ 106 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLS 106 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 33445666677778888999999999999999999998888776654
No 203
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=66.50 E-value=62 Score=33.14 Aligned_cols=34 Identities=9% Similarity=0.101 Sum_probs=27.6
Q ss_pred HHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 298 FLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 298 ~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
++--.++.|+|||++...++++++++++.-.+.+
T Consensus 399 LIt~~iverlGRKkTMal~l~~f~iflfll~~c~ 432 (528)
T KOG0253|consen 399 LITGVIVERLGRKKTMALSLILFGIFLFLLTTCK 432 (528)
T ss_pred hHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhc
Confidence 3445677889999999999999999998766554
No 204
>PRK11010 ampG muropeptide transporter; Validated
Probab=66.00 E-value=20 Score=36.98 Aligned_cols=37 Identities=22% Similarity=0.502 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhhh-----CchHHHH-HHHHHHHHHHHHHHHHh
Q 017498 295 VSSFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIIS 331 (370)
Q Consensus 295 l~s~il~~l~~~i-----g~r~v~~-~s~~i~a~~~~~~~~~~ 331 (370)
+..++..++..|+ |+|+.|+ ++++..++++..+.+..
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~ 102 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLE 102 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcC
Confidence 3456667777777 9998776 77888878877776654
No 205
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=64.77 E-value=30 Score=34.19 Aligned_cols=39 Identities=8% Similarity=-0.195 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM 324 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~ 324 (370)
...|.+...+..+....+.+|+|+|++...+.+.+..++
T Consensus 32 ~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~ 70 (368)
T TIGR00903 32 AITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAA 70 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHH
Confidence 344555666667778899999999988776665555543
No 206
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=64.44 E-value=14 Score=36.17 Aligned_cols=66 Identities=18% Similarity=0.197 Sum_probs=46.7
Q ss_pred cchhhHHHHhcCCCc-hhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHh
Q 017498 54 VQGPARALLADLSGP-DQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 132 (370)
Q Consensus 54 ~q~P~RAli~D~~p~-~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv 132 (370)
.+.+.-+++++.+++ +++.+++++.+.+.++|+.+|..+++.. .+ .++ .+..|.+++++.+++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l-~~-~~G-------------~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 320 TSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYL-TD-RFG-------------YAGGFLSGTVLAVLAI 384 (390)
T ss_pred HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHc-------------cHHHHHHHHHHHHHHH
Confidence 445667777888877 8889999999999999999999887651 11 111 3456776666666555
Q ss_pred hh
Q 017498 133 LV 134 (370)
Q Consensus 133 ~~ 134 (370)
.+
T Consensus 385 ~~ 386 (390)
T TIGR02718 385 LL 386 (390)
T ss_pred HH
Confidence 43
No 207
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=62.90 E-value=83 Score=31.62 Aligned_cols=44 Identities=7% Similarity=-0.136 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHH
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAI 329 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~ 329 (370)
+..|.+...+..++..++.+|+|+|++...+.++.+++.+.+.+
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~ 125 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPW 125 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHH
Confidence 45566677777888899999999999999999888777666544
No 208
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=60.12 E-value=13 Score=39.33 Aligned_cols=82 Identities=13% Similarity=0.178 Sum_probs=58.2
Q ss_pred cccccchhhHHHHhcCCCchhhhhHHHHH-HHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHH
Q 017498 50 ANNTVQGPARALLADLSGPDQRNSANAIF-CSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 128 (370)
Q Consensus 50 s~n~~q~P~RAli~D~~p~~qq~~a~a~~-s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l 128 (370)
+.-.+...+-+|+.|+.||+-++.+.++. ..+-|+|--+|.++|+.. .+.++ + ++.+|...+.+.+++
T Consensus 472 t~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~--v~~fg---~------~ttf~~~giAcl~~l 540 (618)
T KOG3762|consen 472 THALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFV--VERFG---A------RTTFRIFGIACLVTL 540 (618)
T ss_pred HHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhh--heeeh---h------HHHHHHHHHHHHHHH
Confidence 44445677889999999999888888764 556799999999999862 22222 2 235666666667777
Q ss_pred HHHhhheeeEeecc
Q 017498 129 TLCALVTIYFADEV 142 (370)
Q Consensus 129 ~itv~~T~~~v~E~ 142 (370)
+....+-.+..||.
T Consensus 541 ~~~~~iq~~l~~~~ 554 (618)
T KOG3762|consen 541 ALFISIQLLLKRRG 554 (618)
T ss_pred HHHHHhhhhhcccc
Confidence 77777777777664
No 209
>PRK09848 glucuronide transporter; Provisional
Probab=59.71 E-value=9.5 Score=38.43 Aligned_cols=48 Identities=19% Similarity=0.111 Sum_probs=36.9
Q ss_pred hhcccccchhhHHHHhcCCCchh-------hhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 48 DLANNTVQGPARALLADLSGPDQ-------RNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~q-------q~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
-++.-..+.+..+++.|.+|.++ +...++..++..-+|..+|-.+.+.
T Consensus 330 g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~ 384 (448)
T PRK09848 330 SIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAF 384 (448)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566778899999998764 4677889999999999998777654
No 210
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=59.58 E-value=1.3e+02 Score=31.53 Aligned_cols=87 Identities=10% Similarity=0.150 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
+....+++-..|.-+|++-..+|..+|....-+ |.+ ..+.-+.+.+++..+.=++.+.+..+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~--------------~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSN--------------DAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--Chh--------------hhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 788889999999999999999999999875222 111 1123233444444444455666666544
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHh
Q 017498 309 --SRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 309 --~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
.+.++.+++++.+++.+..++.+
T Consensus 362 ~~~~~~~~~~ll~~gl~~~~~p~~~ 386 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLARLFLPFAT 386 (509)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 45556666666655554444443
No 211
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=58.51 E-value=19 Score=35.65 Aligned_cols=47 Identities=19% Similarity=0.070 Sum_probs=35.8
Q ss_pred hcccccchhhHHHHhcCCCc-------hhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 49 LANNTVQGPARALLADLSGP-------DQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 49 ~s~n~~q~P~RAli~D~~p~-------~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++....+....+++.|.+|. +++..++++.+.+..+|+.+|..+.+.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 323 FGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566788899999873 446788899999999999998777654
No 212
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=58.48 E-value=14 Score=37.65 Aligned_cols=88 Identities=17% Similarity=0.184 Sum_probs=63.9
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHH
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 127 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~ 127 (370)
++....-.-|.=.+++.+||+...+..++..+-+.++|+.++..+|.. +.+.++...+. -+|+..+.+++.++
T Consensus 329 ~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~--l~~~~~vt~~~-----f~~l~~lili~~~~ 401 (433)
T PF03092_consen 329 EVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAF--LMELFGVTRDD-----FSNLWLLILICSVI 401 (433)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCCccc-----ccchHHHHHHHHHH
Confidence 344444556777889999999999999999999999999999999976 44444433222 35788888888877
Q ss_pred HHHHhhheeeEeecc
Q 017498 128 LTLCALVTIYFADEV 142 (370)
Q Consensus 128 l~itv~~T~~~v~E~ 142 (370)
-++.+.+..+-.|++
T Consensus 402 ~ll~l~ll~lLp~~~ 416 (433)
T PF03092_consen 402 QLLPLPLLFLLPPQK 416 (433)
T ss_pred HHHHHHHHHHcCCCc
Confidence 766666554444433
No 213
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=58.12 E-value=38 Score=35.25 Aligned_cols=86 Identities=12% Similarity=0.027 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR---- 305 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~---- 305 (370)
++-++|.+.+=--++|-...-|.+.|..+ .+-++. .. .+...+..++..+...+...+..
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~--lg~~~~-------------~~-~~i~~~~~l~~~i~~Pi~G~lSDr~~s 68 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE--LGIPHA-------------WA-SIIWLCGPLSGLLVQPLVGYLSDRCTS 68 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHH-------------HH-HHHHHHHHHHHHHHHhHeeehhcCCCC
Confidence 34455555554455555555555555432 221221 11 23344455555555555556665
Q ss_pred hhCchHHHHHH-HHHHHHHHHHHHHHh
Q 017498 306 WIGSRLVWAIS-NFIVFACMATTAIIS 331 (370)
Q Consensus 306 ~ig~r~v~~~s-~~i~a~~~~~~~~~~ 331 (370)
|+|||+.|+++ .+..+++++.+.+.+
T Consensus 69 r~GRRrp~il~g~~~~~~~l~ll~~~~ 95 (477)
T TIGR01301 69 RFGRRRPFIAAGAALVAFAVILIGFAA 95 (477)
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHhCc
Confidence 69999999986 555556666665554
No 214
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=57.68 E-value=17 Score=37.66 Aligned_cols=62 Identities=18% Similarity=0.109 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 017498 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 366 (370)
Q Consensus 287 ~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~~ 366 (370)
..+.++-.+.|-+...+.+|+.||++..++..+.+++++..-|.+ .-|.-++.=++.|+.
T Consensus 75 ~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--------------------~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 75 TVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--------------------HFWQVLLCRGFVGIG 134 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHhccc
Confidence 478888888999999999999999999999999999998888876 345666666666664
Q ss_pred cc
Q 017498 367 LA 368 (370)
Q Consensus 367 ~a 368 (370)
-|
T Consensus 135 eA 136 (493)
T KOG1330|consen 135 EA 136 (493)
T ss_pred hh
Confidence 43
No 215
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=56.74 E-value=36 Score=33.47 Aligned_cols=90 Identities=16% Similarity=0.118 Sum_probs=63.8
Q ss_pred chhHHHHHHHHHHHhhcccccchhhHHHHhcCCCch---hhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhh
Q 017498 34 TRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPD---QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRAC 110 (370)
Q Consensus 34 ~~~I~l~v~gv~llD~s~n~~q~P~RAli~D~~p~~---qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~ 110 (370)
.....+..+|+.++-++.-..-.-.-++++|-.+++ +++.+++|+=....+|+.+++.+..+.. ++
T Consensus 30 ~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~-~~---------- 98 (372)
T PF00854_consen 30 GIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQ-QN---------- 98 (372)
T ss_dssp ----CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHH-HC----------
T ss_pred hHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhc-cc----------
Confidence 344566777777777777777777788999999765 5668899999999999999987654421 11
Q ss_pred hcccchhHHHHHHHHHHHHHHhhheeeE
Q 017498 111 CAACGNLKAAFLVAVVFLTLCALVTIYF 138 (370)
Q Consensus 111 ~~~~~q~k~~f~i~ai~l~itv~~T~~~ 138 (370)
....+.|.+..+.+++++++.+..
T Consensus 99 ----~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 99 ----YGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp ----S-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred ----cchhhhhhHHHHHHHHHHHHHHhC
Confidence 135667888888888887754443
No 216
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=52.52 E-value=29 Score=36.23 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=47.2
Q ss_pred hhHHHHhcCCCch--hhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 017498 57 PARALLADLSGPD--QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 134 (370)
Q Consensus 57 P~RAli~D~~p~~--qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai~l~itv~~ 134 (370)
..-+++.|..|++ +|..+++++.....+|+.++..+++. +.+. ...+..|.++++.+++++++
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~--L~~~-------------~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGY--AQEE-------------YSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHH--HHhh-------------hChHHHHHHHHHHHHHHHHH
Confidence 3568999999885 57789999999899999999777654 1110 13577788887777766665
Q ss_pred eee
Q 017498 135 TIY 137 (370)
Q Consensus 135 T~~ 137 (370)
-.+
T Consensus 185 ~~~ 187 (493)
T PRK15462 185 FLC 187 (493)
T ss_pred HHH
Confidence 433
No 217
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=50.25 E-value=16 Score=37.18 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=46.6
Q ss_pred HHHHHHHHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccc
Q 017498 40 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFP 103 (370)
Q Consensus 40 ~v~gv~llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~ 103 (370)
+=+|+|.+|.++-- .+-|..|++||...++.|.-+...-.++.+.++-+...++.|+
T Consensus 396 aR~GLW~fDlAVtq-------imQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi~pnp~~F~ 452 (503)
T KOG2601|consen 396 ARLGLWMFDLAVTQ-------IMQETVPESERCVVFGVQNSLNSALDLLKDILVIIVPNPKDFG 452 (503)
T ss_pred HHhhHHhccHHHHH-------HHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEEecCcccee
Confidence 34799999998733 4568999999999999999999999999999986645555554
No 218
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=49.96 E-value=52 Score=34.33 Aligned_cols=47 Identities=11% Similarity=0.054 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
-..+|.+-.++-|++.+.+++++|||....++.++..++.+.+.+.+
T Consensus 65 ~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~ 111 (485)
T KOG0569|consen 65 IVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSK 111 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777788889999999999999999999998877777776655
No 219
>TIGR00901 2A0125 AmpG-related permease.
Probab=49.71 E-value=58 Score=31.23 Aligned_cols=39 Identities=13% Similarity=0.347 Sum_probs=24.1
Q ss_pred HHHHHHHHHHH-HhhhCchHHH-HHHHHHHHHHHHHHHHHh
Q 017498 293 LGVSSFLIEPM-CRWIGSRLVW-AISNFIVFACMATTAIIS 331 (370)
Q Consensus 293 ~~l~s~il~~l-~~~ig~r~v~-~~s~~i~a~~~~~~~~~~ 331 (370)
..+.+.+.++. .|++|+|+.| ..++++.+++++.+.+..
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~ 78 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLV 78 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 33334344443 2335999987 467888888877766553
No 220
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=49.38 E-value=33 Score=35.23 Aligned_cols=81 Identities=17% Similarity=0.140 Sum_probs=56.8
Q ss_pred HhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccccccccccccccchhhhcccchhHHHHHHHHH
Q 017498 47 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 126 (370)
Q Consensus 47 lD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i~~~~~~~~~~~~~~~~~~~~q~k~~f~i~ai 126 (370)
.-++.-..|+-+|+|+.-++|+++-++.++.+++..=..+.+|=++=++ ..+.. ++.|.-+..-.+
T Consensus 351 ~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v--~t~iT------------g~~r~g~~~i~v 416 (438)
T COG2270 351 VGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAV--ITQIT------------GSSRAGVLSIIV 416 (438)
T ss_pred HHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHH--HHHHh------------cchhhHHHHHHH
Confidence 4578888999999999999999999999999999888888888655433 11111 234555554444
Q ss_pred HHHHHhhheeeEeecc
Q 017498 127 FLTLCALVTIYFADEV 142 (370)
Q Consensus 127 ~l~itv~~T~~~v~E~ 142 (370)
++.+... -+..+|++
T Consensus 417 ll~iGl~-~L~~v~~~ 431 (438)
T COG2270 417 LLLIGLL-LLLRVKVP 431 (438)
T ss_pred HHHhhHh-hEEeecCC
Confidence 5555544 45566664
No 221
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=49.18 E-value=70 Score=32.49 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 284 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 284 ~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+....|+.+..+.+.++..+..|+.||++......+|.++=+..++-.
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp 99 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP 99 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 446789999999999999999999999999999999988877666554
No 222
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=49.17 E-value=1.3e+02 Score=29.35 Aligned_cols=24 Identities=4% Similarity=0.040 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCc
Q 017498 286 LLLNSVVLGVSSFLIEPMCRWIGS 309 (370)
Q Consensus 286 l~~~siv~~l~s~il~~l~~~ig~ 309 (370)
+..+.+...+...+..++.+|+|+
T Consensus 45 ~s~~~~~~~~~~~~~g~l~d~~~~ 68 (382)
T TIGR00902 45 IGAALIARFAGGLFFAPLIKDANH 68 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCc
Confidence 335566666666677777777775
No 223
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=48.78 E-value=3.4e+02 Score=28.40 Aligned_cols=36 Identities=8% Similarity=0.083 Sum_probs=29.4
Q ss_pred hHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcc
Q 017498 58 ARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG 93 (370)
Q Consensus 58 ~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G 93 (370)
+=++.-|+++.+|-.|-+...+..+.+|.+++..+-
T Consensus 165 FW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~ 200 (491)
T PF03219_consen 165 FWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLT 200 (491)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777899999999999999998888888775443
No 224
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=48.01 E-value=1.7e+02 Score=29.60 Aligned_cols=47 Identities=13% Similarity=0.138 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh-hCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 285 GLLLNSVVLGVSSFLIEPMCRW-IGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 285 gl~~~siv~~l~s~il~~l~~~-ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
-+.+..++....++..|.+.+| -++|.......+++.++++.+.+.+
T Consensus 248 llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P 295 (395)
T COG2807 248 LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAP 295 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 3556778889999999999885 4678888888888888888887765
No 225
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=46.67 E-value=1.4e+02 Score=32.17 Aligned_cols=45 Identities=13% Similarity=0.139 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 287 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 287 ~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
..+++.+++...+..++...+|||.+.++++++..++++.+.-.+
T Consensus 85 ~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~ 129 (599)
T PF06609_consen 85 TAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ 129 (599)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC
Confidence 345666666667789999999999999999999999988776554
No 226
>PTZ00207 hypothetical protein; Provisional
Probab=44.50 E-value=1.4e+02 Score=32.01 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 296 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 296 ~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
..++..++.+|+|+|.+++++.++++++.+.+.+.
T Consensus 77 ~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala 111 (591)
T PTZ00207 77 FLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALT 111 (591)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788999999999999999999999888775
No 227
>PRK09669 putative symporter YagG; Provisional
Probab=40.79 E-value=41 Score=33.79 Aligned_cols=44 Identities=9% Similarity=0.034 Sum_probs=31.3
Q ss_pred cccchhhHHHHhcCCCchhhh-------hHHHHHHHHHHhhhhhhhhcccc
Q 017498 52 NTVQGPARALLADLSGPDQRN-------SANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 52 n~~q~P~RAli~D~~p~~qq~-------~a~a~~s~~~glG~ilGy~~G~i 95 (370)
...+....+++.|+++.++.. ..++..++...+|..+|-.+++.
T Consensus 334 ~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 334 NLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455778999999754432 35788888888998888777654
No 228
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=39.11 E-value=1.1e+02 Score=31.17 Aligned_cols=76 Identities=14% Similarity=0.269 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 017498 229 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 308 (370)
Q Consensus 229 ~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig 308 (370)
++.+++....|+-.+.|-.++-|.+-|..++ .| =++...|.. +...++.+.+...+...+..|+|
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~--~G------------Ls~~~iG~i-~s~~~~~~l~~qp~~G~i~Dklg 71 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQV--AG------------LSGTEIGII-FSAGSLFALLAQPVYGFISDKLG 71 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H---------------HHHHHHH-HHHHHHHHHHTHHHHHHHHHHCT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHccc--cC------------CCHHHHHHH-HHHHHHHHHHHHHhHHHhcchhh
Confidence 3455555555554444555555557777651 11 012233432 33344555666666677888888
Q ss_pred chH--HHHHHHHH
Q 017498 309 SRL--VWAISNFI 319 (370)
Q Consensus 309 ~r~--v~~~s~~i 319 (370)
.|+ +|.++-++
T Consensus 72 ~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 72 LKKHLLWFIAILL 84 (412)
T ss_dssp TCSHHHHHHHHHH
T ss_pred hhHHHHHHHHHHH
Confidence 654 46555443
No 229
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=37.29 E-value=1.3e+02 Score=29.52 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=35.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CchH-HHHHHHHHHHHHHHHHHHHh
Q 017498 276 DQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-----GSRL-VWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 276 ~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~i-----g~r~-v~~~s~~i~a~~~~~~~~~~ 331 (370)
++|+.....|++.-...-.+..++..++.+|+ |+|+ +..+++++.++++..+.+..
T Consensus 28 ~~g~~~~~ig~~~~~~~~~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~ 89 (402)
T PRK11902 28 VEGLDIQTIGFFSLVGQAYIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCP 89 (402)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcC
Confidence 55655545554422222234456667778888 7765 66777889988888777653
No 230
>PTZ00207 hypothetical protein; Provisional
Probab=36.54 E-value=79 Score=33.87 Aligned_cols=33 Identities=15% Similarity=0.144 Sum_probs=27.1
Q ss_pred hhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhh
Q 017498 56 GPARALLADLSGPDQRNSANAIFCSWMAVGNILG 89 (370)
Q Consensus 56 ~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilG 89 (370)
.++-..+.+..| ++|+++.++...+.|+|+.+.
T Consensus 139 ~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~ 171 (591)
T PTZ00207 139 LGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAIL 171 (591)
T ss_pred HHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHH
Confidence 355667888886 778999999999999999753
No 231
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=35.41 E-value=3.4e+02 Score=27.83 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHH
Q 017498 235 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 314 (370)
Q Consensus 235 c~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~ 314 (370)
..+.|..|+-|-+.-.+.. . -|+=.+. +.+.+ -.+-.++.++.=+++..++.|+|.|++++
T Consensus 23 f~v~F~VW~l~s~l~~~i~---~--~~~LS~~-------------q~~ll-~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIK---S--DFGLSEG-------------QKGLL-VAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred HHHHHHHHHHHHHHHhhhc---c--ccCCCHH-------------HHHHH-HHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 3466778999988888877 2 2432221 22222 22344555555567788999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 017498 315 ISNFIVFACMATTAIIS 331 (370)
Q Consensus 315 ~s~~i~a~~~~~~~~~~ 331 (370)
+|.++..+=.+.+.+..
T Consensus 84 ~s~~l~~IP~~~~~~a~ 100 (417)
T COG2223 84 LSMLLLLIPCLGLAFAV 100 (417)
T ss_pred HHHHHHHHHHHHHHHHc
Confidence 99999888777766654
No 232
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=34.70 E-value=1.8e+02 Score=29.72 Aligned_cols=69 Identities=9% Similarity=0.060 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCch-HHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 017498 287 LLNSVVLGVSSFLIEPMCRWIGSR-LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 365 (370)
Q Consensus 287 ~~~siv~~l~s~il~~l~~~ig~r-~v~~~s~~i~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~G~ 365 (370)
+...+...+..+..+++.+|+..| |+.. ++++..+.++.+..+... + .+..+..+..+++..+.|+
T Consensus 52 ~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~-~lv~~~~~~~~~~~l~~~--~----------~~~~~~f~~~~~~v~~~g~ 118 (437)
T TIGR00939 52 LASQLPSLLFNSLNLFLIFRIPVTVRLLG-GLVILLVVVILVMVLVKV--Q----------TSETGFFVTTMASVVIINS 118 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhccCccchhHH-HHHHHHHHHHHHhheeee--c----------CCcchHHHHHHHHHHHHHh
Confidence 344445555566667777887752 3332 444333333333332211 1 0122345666666666666
Q ss_pred ccc
Q 017498 366 PLA 368 (370)
Q Consensus 366 ~~a 368 (370)
.-|
T Consensus 119 ~~~ 121 (437)
T TIGR00939 119 GMA 121 (437)
T ss_pred hhh
Confidence 543
No 233
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=33.30 E-value=2.5e+02 Score=27.26 Aligned_cols=66 Identities=17% Similarity=0.134 Sum_probs=35.4
Q ss_pred CHHHHHHHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 017498 228 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 307 (370)
Q Consensus 228 P~~~~~lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~i 307 (370)
|.+++..-...|+=|+++--+.-|...|+.+ ++.++. ..| +.+.++++...+.+.+..++.+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~g~~~p~l~~~l~~--~g~s~~-------------~iG-~~~~~~~l~~~l~~~~~g~l~dr~ 66 (382)
T PRK11128 3 LQPTRWLALSYFGYFFAYGVFLPFWSVWLKG--QGYTPE-------------TIG-LLLGAGLVARFLGSLLIAPRVKDP 66 (382)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhHHHHHHh--cCCCHH-------------HHH-HHHHHHHHHHHhhhHHHHHHHhhh
Confidence 4444444444444455544444444455543 232221 223 235556677777777777888888
Q ss_pred Cc
Q 017498 308 GS 309 (370)
Q Consensus 308 g~ 309 (370)
|+
T Consensus 67 g~ 68 (382)
T PRK11128 67 SQ 68 (382)
T ss_pred cc
Confidence 87
No 234
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=33.07 E-value=5.8e+02 Score=26.53 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=29.3
Q ss_pred hhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhh
Q 017498 48 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF 90 (370)
Q Consensus 48 D~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy 90 (370)
-++.-.+.+.--.|+...+.++...+.-+++-.+...+-++|.
T Consensus 113 G~Gaallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~Gg 155 (461)
T KOG3098|consen 113 GFGAALLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIGG 155 (461)
T ss_pred hhhHHheecccceehhhcCChhhHHHHHHHHHHHHHHHHHhhh
Confidence 3555566677778899999888777766666655555555553
No 235
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=32.64 E-value=1.8e+02 Score=30.71 Aligned_cols=43 Identities=2% Similarity=-0.096 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHHh
Q 017498 289 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 331 (370)
Q Consensus 289 ~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~~ 331 (370)
+...-++.-+..-.+.+|+|.|+++.++.+..++..+.+.|.+
T Consensus 71 F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~ 113 (511)
T TIGR00806 71 LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT 113 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444555667889999999999999999999999999876
No 236
>PF13630 SdpI: SdpI/YhfL protein family
Probab=31.81 E-value=2.1e+02 Score=21.07 Aligned_cols=35 Identities=11% Similarity=0.146 Sum_probs=26.7
Q ss_pred hhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 017498 271 EVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 305 (370)
Q Consensus 271 ~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~ 305 (370)
+++..+++-|.++..+....++..+.++++..+.+
T Consensus 19 s~~~W~~a~r~~g~~~~~~Gi~~~~~~~~~~~~~~ 53 (76)
T PF13630_consen 19 SDENWKKAHRFAGKIFIIGGIVLLIIGIIILFLNK 53 (76)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677888899888888888888877777766554
No 237
>PF12832 MFS_1_like: MFS_1 like family
Probab=29.81 E-value=2.5e+02 Score=21.26 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHhhhhhhhccccccceeecC-CCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchH
Q 017498 233 VVLIVMALTWLSWFPFFLFDTDWMGREVYHG-DPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 311 (370)
Q Consensus 233 ~lc~vqffsW~g~f~f~~y~T~~vge~vf~g-dp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~ 311 (370)
.+....|+-+.+.-++.=|.+-|..+ .| |+. +.|.. +.+--++..+.+.+...+++|.++++
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~---~Gl~~~-------------~iGil-~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ---LGLSPS-------------QIGIL-SAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh---cCCCHH-------------HHHHH-HHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 44455555555555555566655443 12 221 33333 33445567777777888889988766
Q ss_pred HHHHHH
Q 017498 312 VWAISN 317 (370)
Q Consensus 312 v~~~s~ 317 (370)
.-...-
T Consensus 67 ~~l~~~ 72 (77)
T PF12832_consen 67 VILLGS 72 (77)
T ss_pred HHHHHH
Confidence 554433
No 238
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=27.30 E-value=1.3e+02 Score=26.43 Aligned_cols=17 Identities=12% Similarity=-0.089 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHHHH
Q 017498 311 LVWAISNFIVFACMATT 327 (370)
Q Consensus 311 ~v~~~s~~i~a~~~~~~ 327 (370)
.+++.|.++|+++++..
T Consensus 98 ~~~~~S~~~Fg~gllGi 114 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLLGI 114 (153)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 45555555555555543
No 239
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=26.87 E-value=1.2e+02 Score=31.35 Aligned_cols=54 Identities=13% Similarity=0.166 Sum_probs=41.6
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHHHHHHH
Q 017498 276 DQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAII 330 (370)
Q Consensus 276 ~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~~~~~~ 330 (370)
+|-++.|.+ +..++++-.+.+-+..++..|+|.|.-.+++.++..++.+...|-
T Consensus 103 ~e~~~iG~L-FaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg 156 (464)
T KOG3764|consen 103 RENTQIGLL-FASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFG 156 (464)
T ss_pred ccccchhHH-HHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHc
Confidence 344466655 677888899999899999999999999999988876666554443
No 240
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=24.65 E-value=5.3e+02 Score=23.32 Aligned_cols=28 Identities=7% Similarity=0.167 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcccccc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMG 257 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vg 257 (370)
..+...+-+.+.++|.|+++...+.++.
T Consensus 77 ~~~~~~ld~~L~~~~if~~~~gi~~~f~ 104 (206)
T PF06570_consen 77 NPWLMALDNSLLFFGIFSLLFGIMGFFS 104 (206)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3467778888889999998887776543
No 241
>PF10997 DUF2837: Protein of unknown function (DUF2837); InterPro: IPR021260 This bacterial family of proteins has no known function.
Probab=24.28 E-value=1.7e+02 Score=27.90 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=50.0
Q ss_pred cchhHHHHHHHHH-HHhhcccccchhhHHHHhcCCCchhhhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 33 RTRAAFVFVIGFW-LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 33 r~~~I~l~v~gv~-llD~s~n~~q~P~RAli~D~~p~~qq~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
++.+..++..++. +.-=..|..|+|.=+-++|..+++++....-.+-++.=+++.+|.++|.+
T Consensus 23 ~kiA~a~SLfni~~LvSRtan~~QaPllg~lvd~~~~~~~~~~l~~~~r~vi~~at~gtl~g~l 86 (254)
T PF10997_consen 23 GKIATAFSLFNIIVLVSRTANMFQAPLLGSLVDTAISQGQLSDLLNQFRLVILAATVGTLLGIL 86 (254)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777777644 45668999999999999999999777766667777788888888888865
No 242
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=23.68 E-value=3.7e+02 Score=27.70 Aligned_cols=71 Identities=24% Similarity=0.263 Sum_probs=47.1
Q ss_pred hhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHHHHHHHHHHHHH
Q 017498 245 WFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM 324 (370)
Q Consensus 245 ~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~ 324 (370)
.++|+++.-++..+ =+++|+..+ -.|. | -.|| .|++.-+++|.....+..|.|||.+..++.+.-++..
T Consensus 44 L~~~~~~~V~~F~~--a~~~~~~~~---~~ya-G-flGS----sF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ 112 (451)
T KOG2615|consen 44 LYPFVVFMVRDFNI--AIGEPDGAS---VFYA-G-FLGS----SFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSY 112 (451)
T ss_pred hhHHHHHhhHHHHH--hhCCccccc---chhh-h-hHhh----HHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHH
Confidence 35677777776654 345554211 1121 1 2233 6888889999999999999999999888887776655
Q ss_pred HH
Q 017498 325 AT 326 (370)
Q Consensus 325 ~~ 326 (370)
..
T Consensus 113 ll 114 (451)
T KOG2615|consen 113 LL 114 (451)
T ss_pred HH
Confidence 43
No 243
>PF11628 TCR_zetazeta: T-cell surface glycoprotein CD3 zeta chain; InterPro: IPR021663 The TCR complex of T-lymphocytes consists of either a TCR alpha/beta or TCR gamma/delta heterodimer co-expressed at the cell surface with the invariant subunits of CD3 labelled gamma, delta, epsilon, zeta, and eta []. The zeta subunit forms either homodimers or heterodimers with eta [], but eta homodimers have not been observed. The structure of the zetazeta transmembrane dimer consists of a left-handed coiled coil with polar contacts. Two aspartic acids are critical for zetazeta dimerisation and assembly with TCR []. The high affinity immunoglobulin epsilon receptor (IgE Fc receptor) subunit gamma associates with a variety of FcR alpha chains to form a functional signaling complex. The gamma subunit has a critical role in allowing the IgE Fc receptor to reach the cell surface and regulates several aspects of the immune response []. This family includes both CD3 zeta subunits and IgE Fc receptor gamma subunits. The gamma chain of the high affinity Fc receptor for IgE has significant structural homology to CD3 zeta and the related CD3 eta subunit and can facilitate T cell receptor expression and signaling in the absence of CD3 zeta and CD3 eta [].; PDB: 2HAC_B.
Probab=23.37 E-value=34 Score=22.02 Aligned_cols=25 Identities=8% Similarity=0.356 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHhhheeeEeecc
Q 017498 118 KAAFLVAVVFLTLCALVTIYFADEV 142 (370)
Q Consensus 118 k~~f~i~ai~l~itv~~T~~~v~E~ 142 (370)
+.++++-.++++-++++|.++.||+
T Consensus 3 ~lCYiLDgiL~iYgiiiT~L~~R~K 27 (33)
T PF11628_consen 3 RLCYILDGILFIYGIIITALYCREK 27 (33)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHHH
Confidence 5678889999999999999999997
No 244
>PRK10429 melibiose:sodium symporter; Provisional
Probab=22.10 E-value=2e+02 Score=29.27 Aligned_cols=45 Identities=9% Similarity=-0.085 Sum_probs=32.1
Q ss_pred ccccchhhHHHHhcCCCchh-------hhhHHHHHHHHHHhhhhhhhhcccc
Q 017498 51 NNTVQGPARALLADLSGPDQ-------RNSANAIFCSWMAVGNILGFSAGAS 95 (370)
Q Consensus 51 ~n~~q~P~RAli~D~~p~~q-------q~~a~a~~s~~~glG~ilGy~~G~i 95 (370)
....+....+++.|+++.++ ....+++.++..-+|..+|..+.+.
T Consensus 338 ~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~ 389 (473)
T PRK10429 338 TALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGV 389 (473)
T ss_pred HHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667889999988542 2247788888888888888766543
No 245
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=21.69 E-value=1.8e+02 Score=30.25 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=49.3
Q ss_pred HHHHHHHHHHHhhhhhhhccccccceeecCCCCCCchhhHhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCchHHH
Q 017498 234 VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVW 313 (370)
Q Consensus 234 lc~vqffsW~g~f~f~~y~T~~vge~vf~gdp~a~s~~~~~Y~~Gvr~Gs~gl~~~siv~~l~s~il~~l~~~ig~r~v~ 313 (370)
+-..|-+.|+.|-+..-|...|-|. . ...-|-..+|-+++....+.--++.+|+|+|...
T Consensus 53 L~~SN~~qWI~ya~i~n~~~~~Ygs------~--------------~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ 112 (480)
T KOG2563|consen 53 LNFSNGMQWIQYAPINNYVNSFYGS------S--------------SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTAL 112 (480)
T ss_pred HHhcCcchheeehhHHHHHHHHhcc------h--------------HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHH
Confidence 3345566799999998888877651 1 1113555678888888887777888888888887
Q ss_pred HHHHHHHHHHH
Q 017498 314 AISNFIVFACM 324 (370)
Q Consensus 314 ~~s~~i~a~~~ 324 (370)
.++-.+-.++-
T Consensus 113 llgt~ln~iGa 123 (480)
T KOG2563|consen 113 LLGTVLNGIGA 123 (480)
T ss_pred HHHHHHHHHHH
Confidence 77766665544
No 246
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=20.94 E-value=1.5e+02 Score=29.99 Aligned_cols=33 Identities=12% Similarity=0.185 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhhhCchHHHHHHHHHHHHHHH
Q 017498 293 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMA 325 (370)
Q Consensus 293 ~~l~s~il~~l~~~ig~r~v~~~s~~i~a~~~~ 325 (370)
-.++|++.|++.||+|..+...+++++.+++.+
T Consensus 60 fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~ 92 (395)
T COG2807 60 FGLFAPAAPRLARRFGEERSLFLALLLIAAGIL 92 (395)
T ss_pred HHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 345677889999999999999999988777654
No 247
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=20.84 E-value=2.6e+02 Score=26.46 Aligned_cols=29 Identities=17% Similarity=0.537 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhccccccc
Q 017498 230 AMHVVLIVMALTWLSWFPFFLFDTDWMGR 258 (370)
Q Consensus 230 ~~~~lc~vqffsW~g~f~f~~y~T~~vge 258 (370)
-||..|++-+|-|+|++--....|+-.|+
T Consensus 163 F~~af~vAflFnwIGFlltycl~tT~agR 191 (262)
T KOG4812|consen 163 FMWAFIVAFLFNWIGFLLTYCLTTTHAGR 191 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Confidence 47889999999999999888888887777
Done!