BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017499
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1
PE=1 SV=1
Length = 447
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 275/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETAEPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ S F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 431
>sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1
SV=1
Length = 447
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 275/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ S F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 431
>sp|O97555|GDIA_CANFA Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1
PE=2 SV=1
Length = 447
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 275/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSF+Y GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQSTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETAEPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ S F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 431
>sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1
SV=3
Length = 447
Score = 437 bits (1125), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 275/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++V+K G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVQKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETAEPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ S F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGSESQVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 431
>sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1
PE=2 SV=1
Length = 447
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 274/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDF 431
>sp|P31150|GDIA_HUMAN Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1
SV=2
Length = 447
Score = 437 bits (1123), Expect = e-122, Method: Compositional matrix adjust.
Identities = 203/358 (56%), Positives = 274/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+TV R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETVNRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDF 431
>sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2
SV=1
Length = 447
Score = 436 bits (1122), Expect = e-122, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 274/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGTAFDF 431
>sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1
PE=2 SV=1
Length = 447
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 202/358 (56%), Positives = 274/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF ++V ++DENDPKT EG+D + R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVFVANFDENDPKTFEGVDPQTTSMRDVYRKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P L+T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
+ E GKVVGV SEGE A+CK+++CDPSY+P++VRK G+V R I I+SHPI NTND
Sbjct: 255 VDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRVRKAGQVIRIICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ SY+HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+D+ F I D YEP+++ F S SYDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIDQKFVAISDLYEPIDDGCESQVFCSCSYDATTHFETTCNDIKDIYKRMAGMAFDF 431
>sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1
SV=2
Length = 445
Score = 424 bits (1090), Expect = e-118, Method: Compositional matrix adjust.
Identities = 196/358 (54%), Positives = 272/358 (75%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D P + + FIS +YDATTHFE+T D+ N+Y +TG D
Sbjct: 374 EPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDF 431
>sp|Q5RCE1|GDIB_PONAB Rab GDP dissociation inhibitor beta OS=Pongo abelii GN=GDI2 PE=2
SV=1
Length = 445
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/358 (54%), Positives = 272/358 (75%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D P + + FIS +YDATTHFE+T D+ N+Y +TG D
Sbjct: 374 EPIEQKFVSISDLLVPKDLGTESLIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDF 431
>sp|O97556|GDIB_CANFA Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2
PE=2 SV=1
Length = 445
Score = 421 bits (1082), Expect = e-117, Method: Compositional matrix adjust.
Identities = 196/358 (54%), Positives = 270/358 (75%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L++T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLYTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DE DP+T EG+D + E+ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IVQNGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA VST AET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIVSTTAETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D P + + FIS +YDATTHFE+T D+ N+Y +TG D
Sbjct: 374 EPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKNIYKRMTGSEFDF 431
>sp|P50399|GDIB_RAT Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2
PE=1 SV=2
Length = 445
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 193/358 (53%), Positives = 273/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D + P + + FIS +YDATTHFE+T D+ ++Y +TG D
Sbjct: 374 EPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTGSEFDF 431
>sp|Q61598|GDIB_MOUSE Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1
SV=1
Length = 445
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 193/358 (53%), Positives = 273/358 (76%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S++HNVA +GK+IA VST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIAIVSTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D + P + + FIS +YDATTHFE+T D+ ++Y +TG D
Sbjct: 374 EPIEQKFVSISDLFVPKDLGTDSQIFISRAYDATTHFETTCDDIKDIYKRMTGSEFDF 431
>sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta OS=Bos taurus GN=GDI2 PE=2 SV=3
Length = 445
Score = 419 bits (1077), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/358 (54%), Positives = 269/358 (75%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L+ T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DENDP+T EG+D + + RE+ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDENDPRTFEGIDPKKTSMREVYKKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND
Sbjct: 255 IEEI-IMQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTND 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D P + + FIS +YDATTHFE+T D+ ++Y + G D
Sbjct: 374 EPIEQKFVSISDLLVPKDLGTESQIFISRTYDATTHFETTCDDIKDIYKRMMGSEFDF 431
>sp|Q6Q7J2|GDIB_PIG Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1
Length = 445
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 194/358 (54%), Positives = 269/358 (75%), Gaps = 2/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG LV++L+ T+VT+YL FK +GSFVY GK++KVP+T+ EAL S LMG+F
Sbjct: 76 LIPKFLMANGQLVKMLLFTEVTRYLDFKVTEGSFVYKGGKIYKVPSTEAEALASSLMGLF 135
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR RKF +YV ++DENDP+T EG+D + RE+ K+ L + IDF GHALAL+R D
Sbjct: 136 EKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTD 195
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP
Sbjct: 196 DYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKP 254
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NT+D
Sbjct: 255 IEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSD 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
++S Q+I+PQ Q+ R+SD+Y+ S +HNVA +GK+IA ST ET P+ E++P ++LL
Sbjct: 314 ANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIAIASTTVETKEPEKEIRPALELL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
P+++ F I D P + + FIS +YDATTHFE+T D+ ++Y +TG D
Sbjct: 374 KPIEQKFVSISDLLVPKDLGTDSQIFISRTYDATTHFETTCGDIKDIYKRMTGSEFDF 431
>sp|Q10305|GDI1_SCHPO Probable secretory pathway GDP dissociation inhibitor 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gdi1 PE=3 SV=1
Length = 440
Score = 399 bits (1024), Expect = e-110, Method: Compositional matrix adjust.
Identities = 188/358 (52%), Positives = 261/358 (72%), Gaps = 1/358 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++PKF++ANG L +LI+TDVT+Y+ FK + GS+VY G++ KVP +MEALKSPLM +F
Sbjct: 75 LVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPGNEMEALKSPLMSLF 134
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRRA+KF +V +Y E+DP T++ +++ R + + K+GL T DFIGHA+AL+ DD
Sbjct: 135 EKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDD 194
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL +PA +T +R+ LYA SIA+F G SPYIYPLYGLGELPQ FARLSA+YGGTYMLN+P
Sbjct: 195 AYLKKPARETRERILLYASSIAKF-GKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNQP 253
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240
++ + ++G +GV S + AK K+++ DPSY KVR VGR+ RAI I++HPIPNT++
Sbjct: 254 VDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRAICILNHPIPNTDN 313
Query: 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLL 300
SVQ+I+PQ Q+ R+ D+Y+ S HNV PKG ++A +ST ET +P +E+ PG+ LL
Sbjct: 314 LDSVQIIIPQNQVKRKHDIYIAGISSVHNVCPKGYYLAIISTIVETANPLSEIAPGLKLL 373
Query: 301 GPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
GPV E F + + YEPV + + D C+IS S DAT+HFE+ DV ++Y +TG L L
Sbjct: 374 GPVVESFSRVQEIYEPVTDGTKDQCYISKSVDATSHFETLTCDVRDIYKRMTGTDLVL 431
>sp|P39958|GDI1_YEAST Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GDI1 PE=1 SV=1
Length = 451
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/360 (51%), Positives = 261/360 (72%), Gaps = 3/360 (0%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+IPKF++ANG L +LIHTDVT+Y+ FK V GS+V+ +GK++KVPA ++EA+ SPLMGIF
Sbjct: 84 LIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIF 143
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKRR +KF ++ Y E+D TH+G+DL + T E+ K+GL ++T +FIGHA+AL +D
Sbjct: 144 EKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTND 203
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
YL +PA + +R+ LY +S+AR+ G SPY+YP+YGLGELPQ FARLSA+YGGTYML+ P
Sbjct: 204 DYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTP 262
Query: 181 ECKVEFDEE-GKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNT 238
+V + ++ GK GV ++ T K V+ DP+Y P K + G RV RAI I++HP+PNT
Sbjct: 263 IDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNT 322
Query: 239 NDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGID 298
+++ S+Q+I+PQ QLGR+SD+Y+ S +HNV KG ++A +ST ETD P EL+P
Sbjct: 323 SNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFK 382
Query: 299 LLGPVDEIFYDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358
LLGP++E F I + +EP + S DN ++S SYDA++HFES DV ++Y +TG L L
Sbjct: 383 LLGPIEEKFMGIAELFEPREDGSKDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVL 442
>sp|Q9V8W3|RABEP_DROME Rab proteins geranylgeranyltransferase component A OS=Drosophila
melanogaster GN=Rep PE=2 SV=1
Length = 511
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 12/298 (4%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+ P+ + A G LV++LI +++ +Y F+AVD + + G++ VP + + + + I
Sbjct: 106 LCPRILYAAGELVQLLIKSNICRYAEFRAVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIV 165
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKR KF DY E D + ++ T E + + + + A+A+
Sbjct: 166 EKRLLMKFLTACNDYGE-DKCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPS 224
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
E ++R + + S+ R+ G +P+++P+YG GELPQ F RL AVYGG Y L +
Sbjct: 225 TSFEE----GMQRTQRFLGSLGRY-GNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRA 279
Query: 181 ECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP--NKVRKVGRVARAIAIMSHPIPN- 237
+ D ++S G+T + K VV P Y P + ++R + I S P+ N
Sbjct: 280 VDDIALDSNSNEFLLSSAGKTLRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGNE 339
Query: 238 --TNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTEL 293
V ++ G R + +L S+ P+G +I ++T A ++ P ++L
Sbjct: 340 ELNKGGGGVNLLRLLDNEGGR-EAFLIQLSHYTGACPEGLYIFHLTTPALSEDPASDL 396
>sp|Q9QZD5|RAE2_MOUSE Rab proteins geranylgeranyltransferase component A 2 OS=Mus
musculus GN=Chml PE=2 SV=2
Length = 621
Score = 122 bits (307), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 151/306 (49%), Gaps = 15/306 (4%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++ K + + G+L+ +LI ++V++Y FK V + +GKV +VP + + S + +
Sbjct: 232 LVSKPLYSQGSLIDLLIKSNVSRYAEFKNVTRILAFWEGKVEQVPCSRADVFNSKELSMV 291
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKR KF + DY+++ + E D + + + + L N FI H++A+ +
Sbjct: 292 EKRMLMKFLTFCLDYEQH---SDEYQDFKQCSFSDYLKTKKLTPNLQHFILHSIAMTSES 348
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NK 179
LD ++ K + + + RF G +P+I+PLYG GE+PQ F R+ AV+GG Y L +K
Sbjct: 349 SCTT---LDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGGVYCLRHK 404
Query: 180 PECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLPNKV---RKVGRVARAIAIMSHPI 235
+C V + G+ G+ G+ + + SYLP + + +++RA+ I I
Sbjct: 405 VQCLVVDKDSGRCKGIIDAFGQRISANYFIVEDSYLPKETCSNVQYKQISRAVLITDQSI 464
Query: 236 PNTNDSHSVQV-ILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELK 294
T+ + + ++P + G S + CS + + + ++T + +L+
Sbjct: 465 LKTDSDQQISILVVPPLEPGTTSVRVMELCSSTMTCMKDSYLVHLTCSSSKT--AREDLE 522
Query: 295 PGIDLL 300
P + L
Sbjct: 523 PVVKQL 528
>sp|P26374|RAE2_HUMAN Rab proteins geranylgeranyltransferase component A 2 OS=Homo
sapiens GN=CHML PE=1 SV=2
Length = 656
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 133/260 (51%), Gaps = 13/260 (5%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++ K + + G L+ +LI +DV++Y+ FK V + +GKV +VP + + S + +
Sbjct: 233 LVSKLLYSQGLLIDLLIKSDVSRYVEFKNVTRILAFREGKVEQVPCSRADVFNSKELTMV 292
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKR KF + +Y+++ P ++ + + E + L N F+ H++A+ +
Sbjct: 293 EKRMLMKFLTFCLEYEQH-PDEYQA--FRQCSFSEYLKTKKLTPNLQHFVLHSIAMTSES 349
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NK 179
+D + K + + + RF G +P+++PLYG GE+PQ F R+ AV+GG Y L +K
Sbjct: 350 SCT---TIDGLNATKNFLQCLGRF-GNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHK 405
Query: 180 PECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLPNKV---RKVGRVARAIAIMSHPI 235
+C V E G+ + G+ K + + SYL + + +++RA+ I I
Sbjct: 406 VQCFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYLSEETCSNVQYKQISRAVLITDQSI 465
Query: 236 PNTN-DSHSVQVILPQKQLG 254
T+ D + +I+P + G
Sbjct: 466 LKTDLDQQTSILIVPPAEPG 485
>sp|P24386|RAE1_HUMAN Rab proteins geranylgeranyltransferase component A 1 OS=Homo
sapiens GN=CHM PE=1 SV=3
Length = 653
Score = 108 bits (271), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++ K + + G L+ +LI ++V++Y FK + + +G+V +VP + + S + +
Sbjct: 231 LVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGRVEQVPCSRADVFNSKQLTMV 290
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKR KF + +Y E P ++G + +T E + L N + H++A+ +
Sbjct: 291 EKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSET 347
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
+D +K K + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L
Sbjct: 348 A---SSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHS 403
Query: 181 -ECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLP-NKVRKVG--RVARAIAIMSHPI 235
+C V E K + + G+ + + + SY P N +V +++RA+ I +
Sbjct: 404 VQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENMCSRVQYRQISRAVLITDRSV 463
Query: 236 PNTNDSHSVQVI-LPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAET 286
T+ + ++ +P ++ G + + CS + + T ++T
Sbjct: 464 LKTDSDQQISILTVPAEEPGTFAVRVIELCSSTMTCMKGTYLVHLTCTSSKT 515
>sp|P37727|RAE1_RAT Rab proteins geranylgeranyltransferase component A 1 OS=Rattus
norvegicus GN=Chm PE=1 SV=1
Length = 650
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 142/289 (49%), Gaps = 18/289 (6%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++ + + + G L+ +LI ++V++Y FK + + +G V +VP + + S + +
Sbjct: 228 LVSQLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMV 287
Query: 61 EKRRARKFFIYVQDYDE--NDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHR 118
EKR KF + +Y+E ++ + +EG T E + L N F+ H++A+
Sbjct: 288 EKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTS 342
Query: 119 DDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLN 178
+ +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L
Sbjct: 343 ETTSC---TVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLR 398
Query: 179 KP-ECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLP-NKVRKVG--RVARAIAIMSH 233
+C V E K V + G+ K + + SYL N +V +++RA+ I
Sbjct: 399 HSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDG 458
Query: 234 PIPNTNDSHSVQVI-LPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVS 281
+ T+ V ++ +P ++ G + CS S KG ++ ++
Sbjct: 459 SVLKTDADQQVSILAVPAEEPGSFGVRVIELCS-STMTCMKGTYLVHLT 506
>sp|Q9QXG2|RAE1_MOUSE Rab proteins geranylgeranyltransferase component A 1 OS=Mus
musculus GN=Chm PE=2 SV=1
Length = 665
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 140/287 (48%), Gaps = 14/287 (4%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
++ K + + G L+ +LI ++V++Y FK + + +G V +VP + + S + +
Sbjct: 243 LVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMV 302
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
EKR KF + +Y E+ P ++ + T T E + L N F+ H++A+ +
Sbjct: 303 EKRMLMKFLTFCVEY-EDHPDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSE- 358
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
+D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L
Sbjct: 359 --TTSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHS 415
Query: 181 -ECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLP-NKVRKVG--RVARAIAIMSHPI 235
+C V E K + + G+ K V + SYL N V +++RA+ I +
Sbjct: 416 VQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSYLSENTCSGVQYRQISRAVLITDGSV 475
Query: 236 PNTNDSHSVQVI-LPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVS 281
+ V ++ +P ++ G + + CS S KG ++ ++
Sbjct: 476 LKPDSDQQVSILTVPAEESGSFAVRVIELCS-STMTCMKGTYLVHLT 521
>sp|P32864|RAEP_YEAST Rab proteins geranylgeranyltransferase component A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MRS6 PE=1
SV=2
Length = 603
Score = 71.6 bits (174), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 17/309 (5%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIF 60
+ PK + A L+ +LI + V +YL F+++ Y K+ T E + +
Sbjct: 133 LSPKILFAKSDLLSILIKSRVHQYLEFQSLSNFHTYENDCFEKLTNTKQEIFTDQNLPLM 192
Query: 61 EKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDD 120
KR KF +V +++ + R + L K+ L+ + + ++ L D
Sbjct: 193 TKRNLMKFIKFVLNWEAQTEIWQPYAE--RTMSDFLGEKFKLEKPQVFELIFSIGLCYD- 249
Query: 121 RYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLY-GLGELPQAFARLSAVYGGTYMLNK 179
LN + ++R++ Y S + G P + Y G GEL Q F R +AV G TY LN
Sbjct: 250 --LNVKVPEALQRIRRYLTSFDVY-GPFPALCSKYGGPGELSQGFCRSAAVGGATYKLN- 305
Query: 180 PECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG----RVARAIAIMSHPI 235
E V F+ KV + +KV+ P+ P + V +V R I+ +P
Sbjct: 306 -EKLVSFNPTTKVATFQDGSKVEVSEKVIISPTQAPKDSKHVPQQQYQVHRLTCIVENPC 364
Query: 236 PNT-NDSHS-VQVILPQKQL--GRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQT 291
N+ S V+ P L G + + F + P+G + ++ST + +
Sbjct: 365 TEWFNEGESAAMVVFPPGSLKSGNKEVVQAFILGAGSEICPEGTIVWYLSTTEQGPRAEM 424
Query: 292 ELKPGIDLL 300
++ ++ +
Sbjct: 425 DIDAALEAM 433
>sp|O60112|YG63_SCHPO Uncharacterized Rab geranylgeranyltransferase C15C4.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC15C4.03 PE=3 SV=1
Length = 459
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 21/223 (9%)
Query: 3 PKFIIANGALVRVLIHTDVTKYLYFK-AVDGSFVYNKGKVHKVPATDMEALKSPLMGIFE 61
P+ I A+ LV++L T + KYL K A + + + KVP + + + + +
Sbjct: 104 PQEIFASSELVKLLSETKIYKYLLLKPARSFRLLTSNEEWIKVPESRADIFNNKNLSLAS 163
Query: 62 KRRARKFFIYVQD----YDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALH 117
KR +F +V + ++N K E + E+ G + +I + G +L
Sbjct: 164 KRIVMRFMKFVSNIADEQNQNLVKEWESKPFYKFL-EEVFQLSGAIEESIIY-GLCQSLS 221
Query: 118 RDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLG-ELPQAFARLSAVYGGTYM 176
+D + ALDTV + Y S + G Y+ +YG G EL Q F R SAV GGT+M
Sbjct: 222 KD--IPTKDALDTVLK---YFHSFGMY-GDYSYLLAMYGTGSELCQGFCRSSAVMGGTFM 275
Query: 177 LNKPECKVEFDEEGKVVGVTSEGETAKCKKVV--CDPSYLPNK 217
L + K+ +E K+ V +G T KK+V D LP++
Sbjct: 276 LGQAIDKI---DESKI--VLKDGSTLSAKKIVSSVDEGKLPHQ 313
>sp|O93831|RAEP_CANAX Rab proteins geranylgeranyltransferase component A OS=Candida
albicans GN=MRS6 PE=3 SV=1
Length = 640
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 126/318 (39%), Gaps = 63/318 (19%)
Query: 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYN----KGKVHKVPATDMEALKSPL 56
+ PK + L+ +LI + V +YL F+++ V+ + KV+ D+ KS
Sbjct: 90 LTPKIMFCQSDLLSLLIKSRVYRYLEFQSLSNFHVFENDDFQQKVNATTKQDIFTDKS-- 147
Query: 57 MGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRE--LIAKYGLDDNTIDFIGHAL 114
+ + KR + + + DP + + T + L ++ L++ I+ + +++
Sbjct: 148 LSLMTKR----YLMKFLKFLLLDPDYKQRVKPYADTPIQVFLQQEFKLEEPQINELVYSI 203
Query: 115 ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGT 174
L ++ + AL RMK + S + + G GEL Q F R +AV G T
Sbjct: 204 GLSYKEQTSTKQAL---IRMKRFLSSFDVYGKFPCMVSKFGGPGELSQGFCRSAAVAGTT 260
Query: 175 YMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP-------NKV--------- 218
Y LN +FD K+ +K++ P+ LP NKV
Sbjct: 261 YKLNTN--LTDFDPISKIAHFNDGSHIKINEKIIISPTQLPKFLQSSYNKVVENLQPYYV 318
Query: 219 -RKVGRVAR------------AIAIM-SHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCC 264
R V V R AI + H +P T++ HSVQVI+ G
Sbjct: 319 TRLVTVVRRDCKEWMSGNESSAIVVFPPHSLP-TDNQHSVQVIIQNGNSG---------- 367
Query: 265 SYSHNVAPKGKFIAFVST 282
V P G+ I F ST
Sbjct: 368 -----VCPDGQAIWFSST 380
>sp|A5IYA9|EFTU_MYCAP Elongation factor Tu OS=Mycoplasma agalactiae (strain PG2) GN=tuf
PE=3 SV=1
Length = 396
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 9/126 (7%)
Query: 18 HTDVTKYLYFKA--VDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDY 75
H D K + A +DGS + +P T L + +G+ K +++
Sbjct: 85 HADYIKNMITGAAQMDGSILVVAATDGAMPQTKEHVLLAKQVGV------PKMVVFLNKC 138
Query: 76 DENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFI-GHALALHRDDRYLNEPALDTVKRM 134
D P+ E +DL + REL+ KYG D + F+ G AL + E L+ + +
Sbjct: 139 DMIKPEDAEMIDLVEMEVRELLTKYGFDGDNTPFVRGSALQALQGKPEYEENILELMNAV 198
Query: 135 KLYAES 140
+ E+
Sbjct: 199 DTWIET 204
>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
Length = 580
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 140 SIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SE 198
S+ QG Y+ G+G L A A +A G + K KV+ + EG+V GVT +
Sbjct: 271 SLEGTQGAWSYVQ--GGMGALSDAIASSAATRGASIFTEKTVAKVQVNSEGRVQGVTLQD 328
Query: 199 GETAKCKKVV 208
GE + + V+
Sbjct: 329 GEEVRSRVVL 338
>sp|Q05638|CHIX_STROI Exochitinase 1 OS=Streptomyces olivaceoviridis GN=chi01 PE=1 SV=1
Length = 597
Score = 33.9 bits (76), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 95 ELIAKYGLDDNTIDFIGHALALHRDDRYLNEP 126
++I +YGLD IDF GH+L+L+ DD P
Sbjct: 369 KIIDEYGLDGLDIDFEGHSLSLNADDTDFKNP 400
>sp|Q68FT3|PYRD2_RAT Pyridine nucleotide-disulfide oxidoreductase domain-containing
protein 2 OS=Rattus norvegicus GN=Pyroxd2 PE=2 SV=1
Length = 581
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Query: 140 SIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEG 199
S+ QG Y+ G+G L A A + +G + K KV+ + EG+V GV +G
Sbjct: 272 SLEGMQGAWSYVQ--GGMGALSDAIASSATAHGASIFTEKTVAKVQVNSEGRVQGVVLQG 329
Query: 200 ETAKCKKVV 208
+VV
Sbjct: 330 GEEVRSRVV 338
>sp|A6VMX3|AMPA_ACTSZ Probable cytosol aminopeptidase OS=Actinobacillus succinogenes
(strain ATCC 55618 / 130Z) GN=pepA PE=3 SV=1
Length = 484
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Query: 193 VGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND--SHSVQVILPQ 250
+GV + A C VC+P+YL + +K + + A+++ + + + L
Sbjct: 169 LGVKLARDIANCPPNVCNPNYLAAQAKK---LEKQTALLTTAVLGEKEMAELGMHAYLGV 225
Query: 251 KQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDI 310
Q G +++ L +Y ++ P K I V D LKP D+ DE+ YD+
Sbjct: 226 SQ-GSKNEAQLSVMTYKNHPDPHAKPIVLVGKGLTFDAGGISLKPSADM----DEMKYDM 280
>sp|P11707|CP3A6_RABIT Cytochrome P450 3A6 OS=Oryctolagus cuniculus GN=CYP3A6 PE=2 SV=2
Length = 501
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 47 TDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELI---AKYGLD 103
T +E +K + +KRR + + + + +H+ +D V + +I A Y
Sbjct: 249 TSVEKIKDDRLKDKQKRRVDFLQLMINSQNSKEIDSHKALDDIEVVAQSIIILFAGYETT 308
Query: 104 DNTIDFIGHALALHRDDRYLNEPALDTV 131
+T+ FI H LA H D + + +DT+
Sbjct: 309 SSTLSFIMHLLATHPDVQQKLQEEIDTL 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,489,766
Number of Sequences: 539616
Number of extensions: 6120005
Number of successful extensions: 13149
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 13074
Number of HSP's gapped (non-prelim): 39
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)