Query 017499
Match_columns 370
No_of_seqs 199 out of 573
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 15:25:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p1w_A Rabgdi protein; GDI RAB 100.0 1.2E-81 4.1E-86 641.6 38.0 365 1-366 91-468 (475)
2 1vg0_A RAB proteins geranylger 100.0 9.9E-67 3.4E-71 546.8 36.2 354 1-363 228-607 (650)
3 2bcg_G Secretory pathway GDP d 100.0 5.1E-54 1.7E-58 435.3 38.4 364 1-365 86-451 (453)
4 1d5t_A Guanine nucleotide diss 100.0 1.5E-53 5E-58 429.9 36.7 356 1-358 78-433 (433)
5 4dgk_A Phytoene dehydrogenase; 99.5 1.2E-12 4E-17 132.4 19.5 184 17-213 70-276 (501)
6 3nrn_A Uncharacterized protein 99.1 5E-09 1.7E-13 103.6 18.6 306 10-351 63-403 (421)
7 3ka7_A Oxidoreductase; structu 98.9 8.3E-07 2.8E-11 87.2 25.0 305 11-353 64-425 (425)
8 2ivd_A PPO, PPOX, protoporphyr 98.1 5.9E-05 2E-09 75.2 15.8 185 9-211 76-290 (478)
9 1s3e_A Amine oxidase [flavin-c 97.9 0.00035 1.2E-08 70.7 18.4 186 10-211 66-264 (520)
10 3nks_A Protoporphyrinogen oxid 97.9 5.9E-05 2E-09 75.1 11.3 64 147-211 223-286 (477)
11 2yg5_A Putrescine oxidase; oxi 97.8 0.00061 2.1E-08 67.3 16.1 188 10-211 66-264 (453)
12 3lov_A Protoporphyrinogen oxid 97.6 0.00071 2.4E-08 67.3 13.2 187 9-210 66-284 (475)
13 3i6d_A Protoporphyrinogen oxid 97.4 0.00068 2.3E-08 66.8 11.3 253 9-282 71-367 (470)
14 1sez_A Protoporphyrinogen oxid 97.3 0.0013 4.5E-08 65.9 12.2 191 10-211 74-304 (504)
15 4gde_A UDP-galactopyranose mut 97.3 0.00024 8.4E-09 71.1 6.4 62 147-211 210-272 (513)
16 2vvm_A Monoamine oxidase N; FA 97.2 0.00052 1.8E-08 68.8 7.7 193 9-211 99-308 (495)
17 2b9w_A Putative aminooxidase; 94.8 0.053 1.8E-06 52.7 7.5 113 90-211 142-254 (424)
18 1b37_A Protein (polyamine oxid 94.7 0.038 1.3E-06 54.9 6.1 61 149-211 197-266 (472)
19 3k7m_X 6-hydroxy-L-nicotine ox 94.6 0.18 6E-06 49.0 10.7 109 91-212 141-256 (431)
20 3dje_A Fructosyl amine: oxygen 94.4 0.082 2.8E-06 51.6 7.8 62 149-211 148-217 (438)
21 2iid_A L-amino-acid oxidase; f 93.3 0.64 2.2E-05 46.0 12.0 60 147-211 230-294 (498)
22 2jae_A L-amino acid oxidase; o 93.0 0.17 5.9E-06 50.1 7.2 60 147-211 228-292 (489)
23 3lxd_A FAD-dependent pyridine 92.8 0.22 7.6E-06 48.4 7.7 64 152-216 188-252 (415)
24 3fg2_P Putative rubredoxin red 92.7 0.2 6.7E-06 48.7 7.0 69 147-216 173-242 (404)
25 3nyc_A D-arginine dehydrogenas 92.2 0.28 9.5E-06 46.3 7.3 61 150-212 143-206 (381)
26 1y56_B Sarcosine oxidase; dehy 91.8 0.39 1.3E-05 45.6 7.8 54 158-212 149-202 (382)
27 2i0z_A NAD(FAD)-utilizing dehy 91.6 0.32 1.1E-05 48.0 7.2 76 134-210 107-186 (447)
28 4dsg_A UDP-galactopyranose mut 90.4 0.26 8.9E-06 49.4 5.3 195 147-352 204-452 (484)
29 2gag_B Heterotetrameric sarcos 90.4 0.64 2.2E-05 44.3 7.8 60 152-212 165-227 (405)
30 4at0_A 3-ketosteroid-delta4-5a 90.2 0.45 1.5E-05 47.8 6.8 52 159-210 203-259 (510)
31 3v76_A Flavoprotein; structura 89.6 1.2 4E-05 43.8 9.2 75 134-210 106-182 (417)
32 3qj4_A Renalase; FAD/NAD(P)-bi 89.6 0.93 3.2E-05 42.5 8.1 54 152-210 106-160 (342)
33 3dme_A Conserved exported prot 89.3 0.85 2.9E-05 42.5 7.6 55 157-212 149-206 (369)
34 3nlc_A Uncharacterized protein 89.3 0.72 2.5E-05 47.3 7.5 57 158-215 220-277 (549)
35 3axb_A Putative oxidoreductase 88.6 0.6 2.1E-05 45.6 6.2 54 158-211 181-250 (448)
36 2gmh_A Electron transfer flavo 88.5 0.84 2.9E-05 46.9 7.5 53 158-210 144-212 (584)
37 1y0p_A Fumarate reductase flav 88.2 0.88 3E-05 46.4 7.4 53 158-210 255-312 (571)
38 3cgv_A Geranylgeranyl reductas 88.1 0.71 2.4E-05 43.8 6.3 53 158-211 102-158 (397)
39 1pj5_A N,N-dimethylglycine oxi 88.1 0.97 3.3E-05 48.3 7.9 61 151-212 141-204 (830)
40 1ryi_A Glycine oxidase; flavop 88.0 0.93 3.2E-05 42.8 7.0 61 150-212 153-216 (382)
41 2weu_A Tryptophan 5-halogenase 87.9 0.94 3.2E-05 45.2 7.3 52 158-210 173-225 (511)
42 2cdu_A NADPH oxidase; flavoenz 87.5 0.83 2.8E-05 44.9 6.5 68 148-216 181-248 (452)
43 1i8t_A UDP-galactopyranose mut 87.4 0.1 3.5E-06 50.4 -0.3 48 147-211 183-231 (367)
44 2e4g_A Tryptophan halogenase; 87.2 1.2 4E-05 45.2 7.6 52 158-210 194-247 (550)
45 1q1r_A Putidaredoxin reductase 87.0 1.2 4.1E-05 43.6 7.3 69 148-216 181-251 (431)
46 1qo8_A Flavocytochrome C3 fuma 86.9 0.9 3.1E-05 46.3 6.5 53 158-210 250-307 (566)
47 3ps9_A TRNA 5-methylaminomethy 86.0 1.1 3.8E-05 46.6 6.8 59 151-211 407-469 (676)
48 2gf3_A MSOX, monomeric sarcosi 85.7 1.6 5.4E-05 41.3 7.2 53 158-212 150-202 (389)
49 3da1_A Glycerol-3-phosphate de 85.6 0.96 3.3E-05 46.2 5.9 63 149-212 159-229 (561)
50 2uzz_A N-methyl-L-tryptophan o 85.5 1.6 5.4E-05 41.0 7.1 52 158-211 149-200 (372)
51 1d4d_A Flavocytochrome C fumar 85.4 1.4 4.8E-05 45.0 7.1 54 158-211 255-313 (572)
52 2oln_A NIKD protein; flavoprot 85.3 1.4 4.8E-05 42.0 6.7 58 152-211 144-204 (397)
53 1rsg_A FMS1 protein; FAD bindi 84.9 0.69 2.4E-05 46.3 4.4 57 151-211 196-253 (516)
54 3nix_A Flavoprotein/dehydrogen 84.8 1.1 3.9E-05 42.9 5.7 54 158-211 106-162 (421)
55 3pvc_A TRNA 5-methylaminomethy 84.4 1.5 5.1E-05 45.8 6.8 58 152-211 403-465 (689)
56 3atr_A Conserved archaeal prot 83.9 1.9 6.4E-05 42.3 7.0 52 158-210 100-157 (453)
57 3ef6_A Toluene 1,2-dioxygenase 83.9 1.3 4.5E-05 42.9 5.8 58 157-216 184-242 (410)
58 2aqj_A Tryptophan halogenase, 83.5 1.9 6.6E-05 43.4 7.0 52 158-210 165-217 (538)
59 2rgh_A Alpha-glycerophosphate 83.4 1.4 4.8E-05 45.1 6.0 61 150-211 178-246 (571)
60 3iwa_A FAD-dependent pyridine 83.1 2.4 8.2E-05 41.8 7.4 69 147-216 191-259 (472)
61 3oc4_A Oxidoreductase, pyridin 82.7 2.8 9.7E-05 41.0 7.8 67 148-216 179-245 (452)
62 2z3y_A Lysine-specific histone 82.2 1.4 4.8E-05 45.9 5.5 54 150-210 393-453 (662)
63 2wdq_A Succinate dehydrogenase 81.7 2 6.7E-05 44.2 6.3 52 158-209 143-200 (588)
64 2pyx_A Tryptophan halogenase; 80.5 3.4 0.00012 41.4 7.6 52 158-210 175-228 (526)
65 1mo9_A ORF3; nucleotide bindin 80.4 2.9 0.0001 42.0 7.0 59 158-216 255-317 (523)
66 2gqf_A Hypothetical protein HI 79.8 5.3 0.00018 38.7 8.5 63 148-211 99-164 (401)
67 2xag_A Lysine-specific histone 79.6 1.7 5.7E-05 47.0 5.1 55 149-210 563-624 (852)
68 2qcu_A Aerobic glycerol-3-phos 79.3 2.7 9.4E-05 41.9 6.4 52 158-211 149-206 (501)
69 2cul_A Glucose-inhibited divis 78.4 3.2 0.00011 36.8 5.9 54 158-213 68-123 (232)
70 3e1t_A Halogenase; flavoprotei 78.3 3.5 0.00012 41.2 6.8 52 158-210 111-167 (512)
71 4gut_A Lysine-specific histone 78.0 3 0.0001 44.5 6.4 54 151-211 527-581 (776)
72 2hqm_A GR, grase, glutathione 77.4 3.8 0.00013 40.5 6.7 68 147-215 216-285 (479)
73 3c4n_A Uncharacterized protein 77.4 1.6 5.4E-05 42.2 3.8 52 158-211 172-232 (405)
74 3ayj_A Pro-enzyme of L-phenyla 77.2 0.85 2.9E-05 48.3 1.9 59 150-209 339-408 (721)
75 2x3n_A Probable FAD-dependent 76.5 3.4 0.00012 39.4 5.9 53 158-211 107-162 (399)
76 3hdq_A UDP-galactopyranose mut 76.2 2.2 7.5E-05 41.8 4.4 169 147-354 211-390 (397)
77 1fec_A Trypanothione reductase 75.6 4.6 0.00016 40.2 6.7 57 158-215 231-288 (490)
78 4dna_A Probable glutathione re 75.6 4.4 0.00015 39.8 6.6 57 157-215 210-268 (463)
79 2wpf_A Trypanothione reductase 75.4 4.8 0.00016 40.1 6.8 68 147-216 225-293 (495)
80 3o0h_A Glutathione reductase; 74.8 5.1 0.00017 39.6 6.8 56 158-215 232-288 (484)
81 1n4w_A CHOD, cholesterol oxida 74.6 4.1 0.00014 40.8 6.1 57 158-214 221-287 (504)
82 2e1m_A L-glutamate oxidase; L- 74.4 8.5 0.00029 37.3 8.1 89 89-190 260-349 (376)
83 1coy_A Cholesterol oxidase; ox 74.1 4.3 0.00015 40.6 6.1 57 158-214 226-292 (507)
84 3cgb_A Pyridine nucleotide-dis 73.5 6.8 0.00023 38.7 7.4 56 158-215 227-282 (480)
85 1xdi_A RV3303C-LPDA; reductase 73.0 6 0.00021 39.3 6.8 66 147-215 213-279 (499)
86 2bc0_A NADH oxidase; flavoprot 72.9 3.7 0.00013 40.8 5.3 67 148-216 226-292 (490)
87 2bs2_A Quinol-fumarate reducta 72.7 5.7 0.0002 41.4 6.8 50 159-209 159-214 (660)
88 3h8l_A NADH oxidase; membrane 72.2 7.3 0.00025 37.3 7.1 79 129-216 184-271 (409)
89 3oz2_A Digeranylgeranylglycero 72.2 7.8 0.00027 36.0 7.1 52 158-210 102-157 (397)
90 3i3l_A Alkylhalidase CMLS; fla 72.2 6.2 0.00021 40.5 6.8 53 158-211 128-184 (591)
91 2ywl_A Thioredoxin reductase r 72.0 12 0.00041 31.1 7.6 54 158-215 56-110 (180)
92 1zk7_A HGII, reductase, mercur 71.8 7.5 0.00026 38.1 7.1 64 148-215 208-271 (467)
93 1k0i_A P-hydroxybenzoate hydro 71.7 7.1 0.00024 37.0 6.8 53 157-210 102-158 (394)
94 1rp0_A ARA6, thiazole biosynth 71.7 5.9 0.0002 36.2 6.0 53 158-211 119-187 (284)
95 1ges_A Glutathione reductase; 71.7 6.9 0.00024 38.3 6.8 57 158-215 208-265 (450)
96 1m6i_A Programmed cell death p 71.6 5.7 0.00019 39.5 6.3 57 158-216 226-283 (493)
97 1trb_A Thioredoxin reductase; 71.5 7.4 0.00025 35.4 6.6 57 159-216 185-248 (320)
98 1onf_A GR, grase, glutathione 71.0 10 0.00034 37.7 8.0 58 158-216 217-276 (500)
99 3ntd_A FAD-dependent pyridine 70.5 6.7 0.00023 39.3 6.6 58 158-215 192-267 (565)
100 2h88_A Succinate dehydrogenase 70.5 5.1 0.00017 41.5 5.8 50 159-209 156-211 (621)
101 2v3a_A Rubredoxin reductase; a 70.0 7 0.00024 37.2 6.3 58 157-216 186-244 (384)
102 1nhp_A NADH peroxidase; oxidor 69.9 4.7 0.00016 39.4 5.1 57 157-215 190-246 (447)
103 3ab1_A Ferredoxin--NADP reduct 67.8 7.9 0.00027 36.1 6.1 58 158-216 202-264 (360)
104 1y56_A Hypothetical protein PH 67.7 14 0.00046 36.7 8.1 76 134-216 238-314 (493)
105 4a9w_A Monooxygenase; baeyer-v 67.5 8.4 0.00029 35.3 6.1 52 158-210 76-127 (357)
106 2zxi_A TRNA uridine 5-carboxym 64.9 9.5 0.00033 39.7 6.4 50 159-210 124-175 (637)
107 2gqw_A Ferredoxin reductase; f 64.3 11 0.00037 36.3 6.4 63 148-216 177-240 (408)
108 3alj_A 2-methyl-3-hydroxypyrid 64.2 11 0.00037 35.5 6.4 49 158-211 107-156 (379)
109 3ihg_A RDME; flavoenzyme, anth 64.2 9.9 0.00034 37.9 6.3 54 157-210 119-178 (535)
110 3gwf_A Cyclohexanone monooxyge 64.2 10 0.00035 38.4 6.4 56 157-212 86-144 (540)
111 1yvv_A Amine oxidase, flavin-c 64.1 12 0.00042 34.1 6.5 52 152-210 104-157 (336)
112 2r9z_A Glutathione amide reduc 63.7 11 0.00039 36.9 6.5 56 158-215 207-264 (463)
113 2yqu_A 2-oxoglutarate dehydrog 63.3 12 0.00039 36.6 6.5 66 147-215 198-264 (455)
114 1chu_A Protein (L-aspartate ox 63.2 5.5 0.00019 40.3 4.2 52 158-209 138-202 (540)
115 4ap3_A Steroid monooxygenase; 62.0 12 0.00042 37.9 6.6 56 157-212 98-156 (549)
116 1kf6_A Fumarate reductase flav 62.0 8.2 0.00028 39.7 5.3 51 158-209 134-191 (602)
117 3r9u_A Thioredoxin reductase; 61.3 17 0.00058 32.6 6.8 56 160-216 185-245 (315)
118 3ces_A MNMG, tRNA uridine 5-ca 61.2 11 0.00038 39.3 6.1 50 159-210 125-176 (651)
119 3itj_A Thioredoxin reductase 1 60.1 11 0.00039 34.2 5.5 54 162-216 212-272 (338)
120 2bi7_A UDP-galactopyranose mut 59.2 3 0.0001 40.2 1.3 46 147-211 187-234 (384)
121 3fmw_A Oxygenase; mithramycin, 59.2 8.1 0.00028 39.4 4.6 53 158-210 148-202 (570)
122 2e5v_A L-aspartate oxidase; ar 57.4 12 0.0004 37.1 5.3 51 158-210 119-171 (472)
123 2qa2_A CABE, polyketide oxygen 56.8 19 0.00064 35.8 6.8 50 158-209 107-160 (499)
124 1jnr_A Adenylylsulfate reducta 56.7 18 0.0006 37.4 6.8 52 158-209 151-212 (643)
125 2qa1_A PGAE, polyketide oxygen 55.6 19 0.00064 35.9 6.5 50 158-209 106-159 (500)
126 3rp8_A Flavoprotein monooxygen 55.0 14 0.0005 35.0 5.4 49 158-210 127-176 (407)
127 3uox_A Otemo; baeyer-villiger 54.4 16 0.00056 36.9 6.0 56 157-212 86-144 (545)
128 1v0j_A UDP-galactopyranose mut 54.4 2.4 8.3E-05 41.0 -0.2 51 147-211 193-245 (399)
129 3lad_A Dihydrolipoamide dehydr 54.4 23 0.00079 34.5 6.9 58 157-215 220-280 (476)
130 3ics_A Coenzyme A-disulfide re 54.2 16 0.00056 36.8 5.9 55 157-215 227-282 (588)
131 1zmd_A Dihydrolipoyl dehydroge 53.9 19 0.00066 35.2 6.3 57 158-215 220-282 (474)
132 1v59_A Dihydrolipoamide dehydr 53.6 17 0.00059 35.5 5.9 68 147-215 214-287 (478)
133 3h28_A Sulfide-quinone reducta 52.9 7.8 0.00027 37.5 3.2 56 154-214 196-255 (430)
134 2a8x_A Dihydrolipoyl dehydroge 52.9 25 0.00084 34.3 6.8 66 147-215 202-271 (464)
135 3gyx_A Adenylylsulfate reducta 52.2 19 0.00066 37.5 6.2 53 157-209 165-227 (662)
136 4hb9_A Similarities with proba 51.9 15 0.00051 34.4 4.9 40 171-210 122-161 (412)
137 3dgh_A TRXR-1, thioredoxin red 51.8 18 0.00062 35.5 5.7 57 158-215 227-289 (483)
138 2qae_A Lipoamide, dihydrolipoy 51.8 27 0.00092 34.0 6.9 56 158-215 215-276 (468)
139 1w4x_A Phenylacetone monooxyge 51.7 23 0.00079 35.5 6.5 55 158-212 94-151 (542)
140 3ab1_A Ferredoxin--NADP reduct 50.5 29 0.00098 32.1 6.6 51 158-209 74-125 (360)
141 3f8d_A Thioredoxin reductase ( 49.6 23 0.0008 31.7 5.7 54 161-216 193-252 (323)
142 2eq6_A Pyruvate dehydrogenase 49.1 24 0.00083 34.4 6.1 57 157-215 209-271 (464)
143 3cty_A Thioredoxin reductase; 49.0 22 0.00076 32.2 5.5 53 163-216 195-253 (319)
144 2zbw_A Thioredoxin reductase; 48.3 31 0.001 31.4 6.4 57 158-216 191-253 (335)
145 2gjc_A Thiazole biosynthetic e 48.1 32 0.0011 32.5 6.6 62 135-197 123-191 (326)
146 2bry_A NEDD9 interacting prote 47.3 11 0.00038 37.5 3.3 53 158-210 166-225 (497)
147 3dk9_A Grase, GR, glutathione 47.3 34 0.0012 33.4 6.9 58 158-215 228-293 (478)
148 3cp8_A TRNA uridine 5-carboxym 46.7 23 0.00078 36.9 5.6 50 159-210 118-169 (641)
149 3kd9_A Coenzyme A disulfide re 46.7 22 0.00075 34.5 5.3 56 158-216 190-245 (449)
150 2jbv_A Choline oxidase; alcoho 45.3 23 0.00077 35.7 5.3 54 159-212 209-270 (546)
151 1dxl_A Dihydrolipoamide dehydr 43.1 30 0.001 33.6 5.7 66 147-215 208-279 (470)
152 1ojt_A Surface protein; redox- 42.2 26 0.0009 34.3 5.1 66 147-215 216-286 (482)
153 2vou_A 2,6-dihydroxypyridine h 42.1 37 0.0013 32.0 6.0 50 158-211 99-149 (397)
154 3jsk_A Cypbp37 protein; octame 42.0 40 0.0014 32.2 6.2 74 135-209 137-245 (344)
155 3urh_A Dihydrolipoyl dehydroge 41.8 44 0.0015 32.8 6.7 58 157-216 238-301 (491)
156 3lzw_A Ferredoxin--NADP reduct 40.9 41 0.0014 30.2 6.0 52 158-210 67-118 (332)
157 3d1c_A Flavin-containing putat 40.8 50 0.0017 30.3 6.6 50 158-209 88-137 (369)
158 2zbw_A Thioredoxin reductase; 40.6 54 0.0019 29.6 6.8 51 158-210 65-116 (335)
159 1ebd_A E3BD, dihydrolipoamide 39.7 36 0.0012 33.0 5.6 56 158-215 211-270 (455)
160 1fl2_A Alkyl hydroperoxide red 39.1 45 0.0015 29.8 5.9 52 158-209 56-109 (310)
161 1vdc_A NTR, NADPH dependent th 37.5 39 0.0013 30.6 5.2 51 166-216 203-260 (333)
162 2q0l_A TRXR, thioredoxin reduc 37.0 46 0.0016 29.8 5.5 50 166-216 187-242 (311)
163 3dgz_A Thioredoxin reductase 2 36.1 57 0.0019 31.9 6.5 58 158-216 225-288 (488)
164 2dkh_A 3-hydroxybenzoate hydro 35.7 34 0.0012 35.1 4.9 53 158-210 141-206 (639)
165 1kdg_A CDH, cellobiose dehydro 35.5 51 0.0018 32.8 6.1 53 161-214 198-260 (546)
166 1cjc_A Protein (adrenodoxin re 35.4 42 0.0014 32.9 5.4 46 171-216 270-334 (460)
167 1vdc_A NTR, NADPH dependent th 35.3 61 0.0021 29.3 6.2 49 158-209 70-118 (333)
168 1fl2_A Alkyl hydroperoxide red 32.9 60 0.002 29.0 5.6 45 171-216 193-243 (310)
169 3c96_A Flavin-containing monoo 32.7 64 0.0022 30.5 6.0 51 158-210 107-164 (410)
170 3k30_A Histamine dehydrogenase 32.5 14 0.00048 38.4 1.4 58 158-216 567-625 (690)
171 2q7v_A Thioredoxin reductase; 32.3 62 0.0021 29.2 5.7 49 166-216 196-250 (325)
172 3ic9_A Dihydrolipoamide dehydr 32.1 92 0.0031 30.5 7.3 55 158-215 215-274 (492)
173 3fbs_A Oxidoreductase; structu 31.9 43 0.0015 29.5 4.4 52 159-216 175-227 (297)
174 3hyw_A Sulfide-quinone reducta 30.8 44 0.0015 32.2 4.6 57 155-214 197-255 (430)
175 1hyu_A AHPF, alkyl hydroperoxi 29.9 68 0.0023 31.8 5.9 51 159-209 268-320 (521)
176 2xdo_A TETX2 protein; tetracyc 29.7 45 0.0015 31.4 4.4 48 159-210 129-177 (398)
177 4g6h_A Rotenone-insensitive NA 27.9 82 0.0028 31.2 6.1 65 146-213 261-330 (502)
178 2q0l_A TRXR, thioredoxin reduc 27.8 97 0.0033 27.5 6.1 49 158-209 59-108 (311)
179 3sx6_A Sulfide-quinone reducta 27.6 49 0.0017 31.8 4.3 59 155-215 205-269 (437)
180 3vrd_B FCCB subunit, flavocyto 26.5 36 0.0012 32.1 3.0 42 169-212 213-255 (401)
181 3itj_A Thioredoxin reductase 1 26.2 1E+02 0.0035 27.5 6.0 50 158-210 84-137 (338)
182 3cty_A Thioredoxin reductase; 25.5 1.1E+02 0.0038 27.4 6.1 50 158-210 72-121 (319)
183 1xhc_A NADH oxidase /nitrite r 24.8 39 0.0013 31.9 2.8 52 158-216 183-235 (367)
184 2xve_A Flavin-containing monoo 24.3 92 0.0031 30.3 5.6 52 158-209 101-160 (464)
185 3f8d_A Thioredoxin reductase ( 24.1 1.2E+02 0.0042 26.7 6.1 50 158-210 70-120 (323)
186 3lzw_A Ferredoxin--NADP reduct 23.6 81 0.0028 28.1 4.7 47 168-216 199-251 (332)
187 1ju2_A HydroxynitrIle lyase; f 23.4 69 0.0024 32.0 4.5 50 164-213 200-259 (536)
188 4eqs_A Coenzyme A disulfide re 22.8 88 0.003 30.2 5.0 53 157-215 187-240 (437)
189 2q7v_A Thioredoxin reductase; 22.6 1.6E+02 0.0054 26.4 6.6 51 158-209 65-117 (325)
190 2r0c_A REBC; flavin adenine di 22.1 1.1E+02 0.0039 30.4 5.8 47 159-209 139-190 (549)
191 4b1b_A TRXR, thioredoxin reduc 21.9 1.6E+02 0.0054 29.6 6.9 57 157-215 262-319 (542)
192 3pl8_A Pyranose 2-oxidase; sub 21.8 65 0.0022 33.0 4.0 45 171-215 273-324 (623)
193 3s5w_A L-ornithine 5-monooxyge 21.7 69 0.0024 30.7 4.0 52 158-209 127-186 (463)
194 1trb_A Thioredoxin reductase; 21.3 1.7E+02 0.0057 26.0 6.4 50 158-210 62-111 (320)
195 4fk1_A Putative thioredoxin re 20.8 1.3E+02 0.0045 26.8 5.6 51 159-209 61-111 (304)
No 1
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.2e-81 Score=641.61 Aligned_cols=365 Identities=47% Similarity=0.845 Sum_probs=338.1
Q ss_pred CcccEEecCchHHHhhhcCCCCceeeeEEeceeEEEe---------CCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHH
Q 017499 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYN---------KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIY 71 (370)
Q Consensus 1 L~Pkll~a~g~lv~~Li~s~v~~YleF~~l~~~y~~~---------~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~ 71 (370)
|.||+++++|+|+++|+++++++||+|++++++|++. +|++++||++++++|+++.+++.|||++||||.+
T Consensus 91 L~P~~l~~~g~L~~lL~~~gv~~ylef~~~~~~y~~~~~~~~~~~~~g~~~~VPss~~e~~~~~lLs~~eK~~l~kFL~~ 170 (475)
T 3p1w_A 91 LIPKFILVGGNLVKILKKTRVTNYLEWLVVEGSYVYQHQKKGFLTSEKFIHKVPATDMEALVSPLLSLMEKNRCKNFYQY 170 (475)
T ss_dssp SSCCBEETTSHHHHHHHHTTCGGGSCEEECSEEEEEEEECCCSSSCCEEEEECCCSHHHHHTCTTSCHHHHHHHHHHHHH
T ss_pred ecCeEeecCcHHHHHHHHCCchheeEEEecCcceEEecCccccccCCCceEeCCCCHHHHhhccCCCHHHHHHHHHHHHH
Confidence 6799999999999999999999999999999999886 6789999999999999999999999999999999
Q ss_pred HhhcccCCCCcccccccchhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCcee
Q 017499 72 VQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYI 151 (370)
Q Consensus 72 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPfl 151 (370)
+.++.+.++++|++++....|+.+++++|++++.+++++.|+++|+..+++.+.|+.+++.|+++|+.|+++| |++||+
T Consensus 171 l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~~~~~~~~~~a~~~l~ri~~y~~Sl~~y-g~s~~~ 249 (475)
T 3p1w_A 171 VSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALYLNDDYLKQPAYLTLERIKLYMQSISAF-GKSPFI 249 (475)
T ss_dssp HHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEE
T ss_pred HHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhhcCCCcccCCHHHHHHHHHHHHHHHhhc-CCCceE
Confidence 9998766666676666667899999999999999999999999999877787789999999999999999999 999999
Q ss_pred ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCC---CccccccCeEEEE
Q 017499 152 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYL---PNKVRKVGRVARA 227 (370)
Q Consensus 152 yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~---p~~~~~~~~v~R~ 227 (370)
||+||+++|+|+|+|.++++||+|++|++|++|.++++|+++||++ +|++++||.||++++|+ |++++..++++|+
T Consensus 250 yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~~~~p~~~~~~~~v~R~ 329 (475)
T 3p1w_A 250 YPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYVMHLKNKIKKIGQVIRC 329 (475)
T ss_dssp EETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGCTTSTTSEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCccccCcccccccceEEEE
Confidence 9999999999999999999999999999999999866789999997 68999999999999999 9888777899999
Q ss_pred EEeecCCCCCCCCCCeEEEEeCCCccCCCCCEEEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHhccCCcccee
Q 017499 228 IAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIF 307 (370)
Q Consensus 228 i~I~~~pi~~~~~~~s~~ii~P~~~~~~~~~v~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~ll~~~~~~~ 307 (370)
|||+++||++++++.++||+||+++++++++|||+++|++|++||+|+||+|+||++||++|++||+|++++|+|++++|
T Consensus 330 i~I~~~pi~~~~~~~~~~i~~P~~~~~~~~~iy~~~~s~~~~~cp~G~~i~~~st~~e~~~~~~~l~~~l~~l~~~~~~~ 409 (475)
T 3p1w_A 330 ICILSNPIPETNQTNSCQIIIPQNQLNRKSDIYINLVSFQHGVTLKGKYIAIVSATVETNNPIKEIEKPLELLGTIEEKF 409 (475)
T ss_dssp EEEESSCCTTSTTCSSEEEEECGGGGTSSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHHTTCSEEEEE
T ss_pred EEEEeccCcccCCCceEEEEeCCcccCCCCCEEEEEECCCcCcCCCCcEEEEEEeecCCCCHHHHHHHHHHHhcchhhee
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeccccCCCCCCCcEEEcCCCCCCcchHHHHHHHHHHHHhhcCCCcccccChhhhh
Q 017499 308 YDIYDRYEPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLSAAS 366 (370)
Q Consensus 308 ~~~~~~~~~~~~~~~~~v~~~~~~d~~~~fe~~~~~v~~i~~~i~g~~~~~~~~~~~~~ 366 (370)
+.++++|+|.++|.++|||||+|||+++|||++++||++||+||||+++||++.++.++
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 468 (475)
T 3p1w_A 410 VKISDLYVSTSKKPADNIFVTSSYDATSHFETATNDLLQIWENLWGQKLNFDDLNTNAD 468 (475)
T ss_dssp EEEEEEEEESCSSCTTCEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC--------
T ss_pred ccchheeeecccCCCCCEEEeCCCCCccchHHHHHHHHHHHHHHhCCcceecCCCcccc
Confidence 99999999999999999999999999999999999999999999999999996554443
No 2
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=100.00 E-value=9.9e-67 Score=546.79 Aligned_cols=354 Identities=22% Similarity=0.430 Sum_probs=314.5
Q ss_pred CcccEEecCchHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC
Q 017499 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 80 (370)
Q Consensus 1 L~Pkll~a~g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~ 80 (370)
|.||+||++|.|+++|+++++++||+|+.++++|++.+|++++||++++++|+++.|++.|||+|||||+++.+|.+ .+
T Consensus 228 L~PklL~~~g~lv~LL~~sgV~~yLEFk~v~~~y~~~~G~~~~VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~-~p 306 (650)
T 1vg0_A 228 LVSKLLYSRGLLIDLLIKSNVSRYAEFKNITRILAFREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEE-HP 306 (650)
T ss_dssp SSCCCEESSSHHHHHHHHHTGGGGCCEEECCEEEEESSSSEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGG-CH
T ss_pred eCCeeeeCCcHHHHHHHHcCCcceeeEEEccceEEecCCCEeECCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhcc-Ch
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999764 34
Q ss_pred CcccccccchhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcH
Q 017499 81 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEL 160 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI 160 (370)
.+++ .+...|+.++++++++++++++++.+++++...+ ..|+..++.++++|+.++++| |++|+.||+||+|+|
T Consensus 307 ~~~~--~~d~~S~~d~L~~~~ls~~L~~~L~~~lal~~~~---~~pa~~~l~~i~~~l~sl~~y-g~sg~~yp~GG~g~L 380 (650)
T 1vg0_A 307 DEYR--AYEGTTFSEYLKTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGEL 380 (650)
T ss_dssp HHHH--TTTTSBHHHHHTTSSSCHHHHHHHHHHTTC--CC---SCBHHHHHHHHHHHHHHTTSS-SSSSEEEETTCTTHH
T ss_pred HHHh--hhccCCHHHHHHHhCCCHHHHHHHHHHHhccCCC---CCchhHHHHHHHHHHHHHHhh-ccCceEEeCCchhHH
Confidence 3333 3356899999999999999999999988887533 247889999999999999999 999999999999999
Q ss_pred HHHHHHHHHHhCcEEEcCCccceEEEcCC-CcEEEEEe-CCeEEEcCEEEECCCCCCccccc---cCeEEEEEEeecCCC
Q 017499 161 PQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS-EGETAKCKKVVCDPSYLPNKVRK---VGRVARAIAIMSHPI 235 (370)
Q Consensus 161 ~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~-~~~~gV~~-~ge~i~a~~VV~~~~y~p~~~~~---~~~v~R~i~I~~~pi 235 (370)
+|+|||+++++||+|+||++|++|.++.+ |+++||+. +|++++||+||++|+|+|...+. .+++.|+|||+++|+
T Consensus 381 ~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~~~~~~~~~~v~R~i~i~~~pi 460 (650)
T 1vg0_A 381 PQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSV 460 (650)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTTTTTTCCCEEEEEEEEEESSCS
T ss_pred HHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHhHhccccccceEEEEEEecCCC
Confidence 99999999999999999999999998643 89999985 69999999999999999976533 468999999999999
Q ss_pred CCCCCC-CeEEEEeCCCccCCCCCEEEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHh-ccCCccce-------
Q 017499 236 PNTNDS-HSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGID-LLGPVDEI------- 306 (370)
Q Consensus 236 ~~~~~~-~s~~ii~P~~~~~~~~~v~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~-ll~~~~~~------- 306 (370)
+++... ..++++||+.+ +++++||++++|+++++||+|+||+|+||. ++++|+++|+++++ |++++.+.
T Consensus 461 ~~~~~~~~~~~iiiP~~~-g~~~~V~i~~~Ss~~~~cP~G~~Vv~lst~-~~~~~~~eLe~~l~~L~~~~~~~~~~~~~~ 538 (650)
T 1vg0_A 461 LRTDADQQVSILTVPAEE-PGSFAVRVIELCSSTMTCMKGTYLVHLTCM-SSKTAREDLERVVQKLFTPYTEIEAENEQV 538 (650)
T ss_dssp SCCSCCCCCEEEEECCSS-TTSCCEEEEEECGGGTSSCTTCEEEEEEEE-CSSCHHHHHHHHHHHHCBSCSCCC------
T ss_pred CCcCCCcceEEEEccCcc-CCCCCEEEEEeCCCCCCCCCCCEEEEEEee-cCCCHHHHHHHHHHHHhccccccccccccc
Confidence 887544 67889999988 578899999999999999999999999998 68899999999999 55766332
Q ss_pred ---------eeeeeecc---ccCCCCCCCcEEEcCCCCCCcchHHHHHHHHHHHHhhcCCCcccccChh
Q 017499 307 ---------FYDIYDRY---EPVNEPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLS 363 (370)
Q Consensus 307 ---------~~~~~~~~---~~~~~~~~~~v~~~~~~d~~~~fe~~~~~v~~i~~~i~g~~~~~~~~~~ 363 (370)
|+.+.+.+ +|..++.++|||+|++||+++|||+++++|++||++|+|++-+|.+.++
T Consensus 539 ~~~~vLws~~~~~~~~~~~~~~~~~~~~~ni~~~~~~d~~~~fe~~v~~~~~i~~~i~~~e~F~p~~p~ 607 (650)
T 1vg0_A 539 EKPRLLWALYFNMRDSSDISRDCYNDLPSNVYVCSGPDSGLGNDNAVKQAETLFQQICPNEDFCPAPPN 607 (650)
T ss_dssp -CCBEEEEEEEEEEECTTCCGGGSSSCCTTEEEECCCCSSSSSHHHHHHHHHHHHHHSTTCCSSCCCC-
T ss_pred cCCceEEEEEEEeecccccccccccCCCCCEEEeCCCCCccCHHHHHHHHHHHHHHHcCCCCCCCCCcC
Confidence 55566666 6777789999999999999999999999999999999999999986554
No 3
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=100.00 E-value=5.1e-54 Score=435.32 Aligned_cols=364 Identities=51% Similarity=0.906 Sum_probs=326.8
Q ss_pred CcccEEecCchHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC
Q 017499 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 80 (370)
Q Consensus 1 L~Pkll~a~g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~ 80 (370)
|.|+++++.+.++++|...++.+|++|+.++++|+|.+|+.+++|.++.+.|.+..+++.+|+++++|++++.++.+.++
T Consensus 86 l~P~~l~~~~~l~~ll~~lg~~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p 165 (453)
T 2bcg_G 86 LIPKFLMANGELTNILIHTDVTRYVDFKQVSGSYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDL 165 (453)
T ss_dssp SSCCBEETTSHHHHHHHHHTGGGTCCEEECCCEEEEETTEEEECCSSHHHHHHCTTSCHHHHHHHHHHHHHHHHCBTTBG
T ss_pred cccceeecCcHHHHHHHhcCCccceEEEEccceeEEeCCeEEECCCChHHHHhhhccchhhHHHHHHHHHHHHHhccCCc
Confidence 45999999999999999999999999999999999999999999999889999999999999999999999988765434
Q ss_pred CcccccccchhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcH
Q 017499 81 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEL 160 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI 160 (370)
.+++..+....|+.+++++|++++++++++.+++++...+.|...|+..++.++..|+.++++| |.++|+||.||+++|
T Consensus 166 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~l~~~~~~~~~p~~~~~~~~~~~~~s~~~~-~~~~~~~p~gG~~~l 244 (453)
T 2bcg_G 166 STHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGEL 244 (453)
T ss_dssp GGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBHHHHHHHHHHHHHHHHHH-SSCSEEEETTCTTHH
T ss_pred hhhhccccccCCHHHHHHHhCCCHHHHHHHHHHHHhccCccccCCchHHHHHHHHHHHHHHHhh-cCCceEeeCCCHHHH
Confidence 3333223456799999999999999999998888887765676678999999999999999999 899999999999999
Q ss_pred HHHHHHHHHHhCcEEEcCCccceEEEcC-CCcEEEEEeCCeEEEcCEEEECCCCCCccccccC-eEEEEEEeecCCCCCC
Q 017499 161 PQAFARLSAVYGGTYMLNKPECKVEFDE-EGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVG-RVARAIAIMSHPIPNT 238 (370)
Q Consensus 161 ~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~-~~~~~gV~~~ge~i~a~~VV~~~~y~p~~~~~~~-~v~R~i~I~~~pi~~~ 238 (370)
+|+|+|.++..||++++|++|++|..+. ++++.+|.++|+.++||.||+++++.+.+.++.. ...|++||+++|++++
T Consensus 245 ~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~~g~~~~ad~VV~a~~~~~~~l~~~~~~~~~~~~i~~~~~~~~ 324 (453)
T 2bcg_G 245 PQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNT 324 (453)
T ss_dssp HHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEETTEEEECSCEEECGGGCGGGEEEEEEEEEEEEEEESSCCTTS
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEECCeEEECCEEEECCCccchhhcccCCcceeEEEEEccccCCC
Confidence 9999999999999999999999998852 6788899989999999999999998887766556 7999999999999877
Q ss_pred CCCCeEEEEeCCCccCCCCCEEEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHhccCCccceeeeeeeccccCC
Q 017499 239 NDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVN 318 (370)
Q Consensus 239 ~~~~s~~ii~P~~~~~~~~~v~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~ 318 (370)
+...+.+|++|+++..+++++||.+.|...+.||+|++++|+++.+++.+++++|++++++|+++.+.|..+.+.|+|.+
T Consensus 325 ~~~~~~~ii~~~~~~~~~~~~~v~~~s~~d~~aP~G~~~~~v~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~ 404 (453)
T 2bcg_G 325 SNADSLQIIIPQSQLGRKSDIYVAIVSDAHNVCSKGHYLAIISTIIETDKPHIELEPAFKLLGPIEEKFMGIAELFEPRE 404 (453)
T ss_dssp TTCSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHGGGCSCSEEEEEEEEEEEESS
T ss_pred CCCccEEEEeCccccCCCCCEEEEEeCCCCCCCCCCcEEEEEEEecCCCCHHHHHHHHHHHhhhHHHhhccchheeeecC
Confidence 65667889999888777889999999988889999999999999999999999999999999998888999999999998
Q ss_pred CCCCCcEEEcCCCCCCcchHHHHHHHHHHHHhhcCCCcccccChhhh
Q 017499 319 EPSLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDLSVDLSAA 365 (370)
Q Consensus 319 ~~~~~~v~~~~~~d~~~~fe~~~~~v~~i~~~i~g~~~~~~~~~~~~ 365 (370)
++..+|||+|++||+++|||+++++++++|++|+|+++||++.+...
T Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 451 (453)
T 2bcg_G 405 DGSKDNIYLSRSYDASSHFESMTDDVKDIYFRVTGHPLVLKQRQEQE 451 (453)
T ss_dssp CSTTTSEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCCCCCC---
T ss_pred CCCCCCEEECCCCCccccHHHHHHHHHHHHHHHHCCccccccCcccc
Confidence 88899999999999999999999999999999999999999655443
No 4
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=100.00 E-value=1.5e-53 Score=429.88 Aligned_cols=356 Identities=57% Similarity=1.016 Sum_probs=323.3
Q ss_pred CcccEEecCchHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC
Q 017499 1 MIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 80 (370)
Q Consensus 1 L~Pkll~a~g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~ 80 (370)
+-|+++++++.++++|...++.+|++|+.+++.|+|.+|+.+++|.++.+.+.+..+++.+|++++||++++.++...++
T Consensus 78 ~gP~~l~~~~~l~~ll~~lgl~~~l~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p 157 (433)
T 1d5t_A 78 LIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDP 157 (433)
T ss_dssp SSCCBEETTSHHHHHHHHHTGGGGCCEEECCEEEEEETTEEEECCCSHHHHHHCSSSCHHHHHHHHHHHHHHHHCCTTCG
T ss_pred cCcceeeccchHHHHHHHcCCccceEEEEeCceEEeeCCEEEECCCCHHHHhhCcccChhhHHHHHHHHHHHHhhcccCc
Confidence 35999999999999999999999999999999999999999999999889999999999999999999999988765444
Q ss_pred CcccccccchhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcH
Q 017499 81 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGEL 160 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI 160 (370)
..++..+....|+.++++++++++.+++++.++++++..+++.+.|+..++.++..|+.++++| |++|+.||.||+++|
T Consensus 158 ~~~~~~~~~~~s~~~~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~s~~~~-g~~~~~~p~gG~~~l 236 (433)
T 1d5t_A 158 KTFEGVDPQNTSMRDVYRKFDLGQDVIDFTGHALALYRTDDYLDQPCLETINRIKLYSESLARY-GKSPYLYPLYGLGEL 236 (433)
T ss_dssp GGGTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCCSSSGGGGSBSHHHHHHHHHHHHSCCSS-SCCSEEEETTCTTHH
T ss_pred hhccccccccCCHHHHHHHcCCCHHHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHhc-CCCcEEEeCcCHHHH
Confidence 3333334456899999999999999999998888777655677788899999999999999999 999999999999999
Q ss_pred HHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCccccccCeEEEEEEeecCCCCCCCC
Q 017499 161 PQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPNKVRKVGRVARAIAIMSHPIPNTND 240 (370)
Q Consensus 161 ~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~~~~~~~~v~R~i~I~~~pi~~~~~ 240 (370)
+|+|+|.++.+||++++|++|++|..+ ++++.+|.++|++++||.||++.++.+...++..+..|+++|+++|+++++.
T Consensus 237 ~~~l~~~~~~~G~~i~~~~~V~~I~~~-~~~v~~v~~~g~~~~ad~VV~a~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 315 (433)
T 1d5t_A 237 PQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQLICDPSYVPDRVRKAGQVIRIICILSHPIKNTND 315 (433)
T ss_dssp HHHHHHHHHHHTCCCBCSCCCCEEEEE-TTEEEEEEETTEEEECSEEEECGGGCGGGEEEEEEEEEEEEEESSCCTTSTT
T ss_pred HHHHHHHHHHcCCEEECCCEEEEEEEe-CCEEEEEEECCeEEECCEEEECCCCCcccccccCcceeEEEEEcCcccccCC
Confidence 999999999999999999999999875 6888999889999999999999998877665555789999999999987765
Q ss_pred CCeEEEEeCCCccCCCCCEEEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHhccCCccceeeeeeeccccCCCC
Q 017499 241 SHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLGPVDEIFYDIYDRYEPVNEP 320 (370)
Q Consensus 241 ~~s~~ii~P~~~~~~~~~v~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~ 320 (370)
....+|++|+++..+++++||.+.|.+++.||+|++++|+++.+++.+++++|++++++|+++.+.|..+.+.|+|.+++
T Consensus 316 ~~~~~i~~~~~~~~~~~~~~v~~~s~d~~~aP~G~~~~~~~~~~p~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 395 (433)
T 1d5t_A 316 ANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALGLLEPIDQKFVAISDLYEPIDDG 395 (433)
T ss_dssp CSSEEEEECGGGTTCSSCEEEEEEEGGGTSSCTTCEEEEEEEECCSSCHHHHTHHHHTTTCSCSEEEEEEEEEEEESCCS
T ss_pred CceEEEEeCccccCCCCCEEEEEECCCCcccCCCCEEEEEEEecCCCCHHHHHHHHHHHhhhHHhheeccceeeeecCCC
Confidence 66789999988877788999999999999999999999999999999999999999999999989999999999999888
Q ss_pred CCCcEEEcCCCCCCcchHHHHHHHHHHHHhhcCCCccc
Q 017499 321 SLDNCFISTSYDATTHFESTVTDVLNMYTMITGKVLDL 358 (370)
Q Consensus 321 ~~~~v~~~~~~d~~~~fe~~~~~v~~i~~~i~g~~~~~ 358 (370)
.++|||+|++||+++|||+++++|+++|+||+|+++||
T Consensus 396 ~~~~~~~~~~~d~~~~~e~~~~~~~~~~~~~~~~~~~~ 433 (433)
T 1d5t_A 396 SESQVFCSCSYDATTHFETTCNDIKDIYKRMAGSAFDF 433 (433)
T ss_dssp TTTCEEECCCCCSCSBSHHHHHHHHHHHHHHHSSCCCC
T ss_pred CCCCEEECCCCCccccHHHHHHHHHHHHHHHhCCcCCC
Confidence 89999999999999999999999999999999999986
No 5
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.48 E-value=1.2e-12 Score=132.41 Aligned_cols=184 Identities=17% Similarity=0.204 Sum_probs=130.2
Q ss_pred hcCCCCceeeeEEeceeE--EEeCCeEEEccCCHHHHHhC-CCCCHHHHHHHHHHHHHHhhcccCCCCc---cccc----
Q 017499 17 IHTDVTKYLYFKAVDGSF--VYNKGKVHKVPATDMEALKS-PLMGIFEKRRARKFFIYVQDYDENDPKT---HEGM---- 86 (370)
Q Consensus 17 i~s~v~~YleF~~l~~~y--~~~~g~~~~VP~s~~evf~s-~~ls~~eKr~lmkFL~~v~~~~~~~~~~---~~~~---- 86 (370)
...++.+|+++.++++.| .|.||+.+.++.+.+...+. ..+++.+...+.+|+..+.......... ....
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (501)
T 4dgk_A 70 AGKQLKEYVELLPVTPFYRLCWESGKVFNYDNDQTRLEAQIQQFNPRDVEGYRQFLDYSRAVFKEGYLKLGTVPFLSFRD 149 (501)
T ss_dssp TTCCGGGTCCEEEESSSEEEEETTSCEEEECSCHHHHHHHHHHHCTHHHHHHHHHHHHHHHHTSSSCC--CCCCCCCHHH
T ss_pred hcchhhhceeeEecCcceEEEcCCCCEEEeeccHHHHHHHHhhcCccccchhhhHHHHHHHhhhhhhhhccccccchhhh
Confidence 345678999999999988 46789999999998766555 5567889999999999887632211000 0000
Q ss_pred ------cc----chhhHHHHHHHcCCChhHHHHHH-HhhhcccCCCcCCcchHHHHHHHHHHHH-hhhcccCCCceeecC
Q 017499 87 ------DL----TRVTTRELIAKYGLDDNTIDFIG-HALALHRDDRYLNEPALDTVKRMKLYAE-SIARFQGGSPYIYPL 154 (370)
Q Consensus 87 ------~~----~~~~~~~~~~~~~L~~~l~~~i~-~alal~~~~~~~~~~~~~~l~ri~~yl~-S~g~y~G~sPflyp~ 154 (370)
.+ ..+++.+.+.++.-++.++.++. +++.... ++...++... +..++. ..|.| ||.
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~g~--~p~~~~~~~~---~~~~~~~~~G~~-------~p~ 217 (501)
T 4dgk_A 150 MLRAAPQLAKLQAWRSVYSKVASYIEDEHLRQAFSFHSLLVGG--NPFATSSIYT---LIHALEREWGVW-------FPR 217 (501)
T ss_dssp HHHSGGGTTTSHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHS--CC--CCCTHH---HHHHHHSCCCEE-------EET
T ss_pred hhhhhhhhhhhhhcccHHHHHHHHhccHHHHhhhhhhhcccCC--Ccchhhhhhh---hhhhhhccCCeE-------EeC
Confidence 00 11355667777777888887752 2322222 2333344333 233333 33445 999
Q ss_pred CCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCC
Q 017499 155 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 213 (370)
Q Consensus 155 yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y 213 (370)
+|++.|++++++.+...||.+++|++|++|.++ +++++||++ +|+++.||.||++.+.
T Consensus 218 GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~-~~~~~gV~~~~g~~~~ad~VV~~a~~ 276 (501)
T 4dgk_A 218 GGTGALVQGMIKLFQDLGGEVVLNARVSHMETT-GNKIEAVHLEDGRRFLTQAVASNADV 276 (501)
T ss_dssp THHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSCEEECCC-
T ss_pred CCCcchHHHHHHHHHHhCCceeeecceeEEEee-CCeEEEEEecCCcEEEcCEEEECCCH
Confidence 999999999999999999999999999999985 789999996 8999999999998764
No 6
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.07 E-value=5e-09 Score=103.57 Aligned_cols=306 Identities=10% Similarity=0.091 Sum_probs=172.7
Q ss_pred chHHHhhhcCCCCceeeeEEeceeE-EEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCCCccccccc
Q 017499 10 GALVRVLIHTDVTKYLYFKAVDGSF-VYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDL 88 (370)
Q Consensus 10 g~lv~~Li~s~v~~YleF~~l~~~y-~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~~~~~~~~~ 88 (370)
..+.+++...++ +.++...++.+ ++.+|+.+++|... ..+++.++.++.+++........ +.
T Consensus 63 ~~~~~l~~~lg~--~~~~~~~~~~~~~~~~g~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~---------~~ 125 (421)
T 3nrn_A 63 GPLAHLLRILGA--KVEIVNSNPKGKILWEGKIFHYRESW------KFLSVKEKAKALKLLAEIRMNKL---------PK 125 (421)
T ss_dssp SHHHHHHHHHTC--CCCEEECSSSCEEEETTEEEEGGGGG------GGCC--------CCHHHHHTTCC---------CC
T ss_pred hHHHHHHHHhCC--cceEEECCCCeEEEECCEEEEcCCch------hhCCHhHHHHHHHHHHHHHhccC---------CC
Confidence 356666666555 46677776544 45588999998643 35788888888888876653110 11
Q ss_pred chhhHHHHHHHcCCC-hhHHHHHHHhh-hcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcHHHHHHH
Q 017499 89 TRVTTRELIAKYGLD-DNTIDFIGHAL-ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFAR 166 (370)
Q Consensus 89 ~~~~~~~~~~~~~L~-~~l~~~i~~al-al~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI~Qaf~R 166 (370)
.+.++.++++.++++ +.+..++.... .... .++...++...+.++..+...-|.+ +|.+|+++|++++.+
T Consensus 126 ~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~-------~~~gG~~~l~~~l~~ 197 (421)
T 3nrn_A 126 EEIPADEWIKEKIGENEFLLSVLESFAGWADS-VSLSDLTALELAKEIRAALRWGGPG-------LIRGGCKAVIDELER 197 (421)
T ss_dssp CCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHS-SCGGGSBHHHHHHHHHHHHHHCSCE-------EETTCHHHHHHHHHH
T ss_pred CCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcC-CCcccCCHHHHHHHHHHHhhcCCcc-------eecCCHHHHHHHHHH
Confidence 236778888777443 44444431111 1111 1333456666767666664432333 899999999999999
Q ss_pred HHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCC-----------CCccc----ccc--CeEEEEEE
Q 017499 167 LSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY-----------LPNKV----RKV--GRVARAIA 229 (370)
Q Consensus 167 laAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y-----------~p~~~----~~~--~~v~R~i~ 229 (370)
.+...|+.+++|++|++|..+ ++++ |.++|+.+.||.||.+... +|... +.. ..+...-+
T Consensus 198 ~~~~~G~~i~~~~~V~~i~~~-~~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l 274 (421)
T 3nrn_A 198 IIMENKGKILTRKEVVEINIE-EKKV--YTRDNEEYSFDVAISNVGVRETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNL 274 (421)
T ss_dssp HHHTTTCEEESSCCEEEEETT-TTEE--EETTCCEEECSEEEECSCHHHHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEE
T ss_pred HHHHCCCEEEcCCeEEEEEEE-CCEE--EEeCCcEEEeCEEEECCCHHHHHHhcCcccCCHHHHHHHhCCCCCceEEEEE
Confidence 999999999999999999874 5666 7778999999999986432 12110 011 12222333
Q ss_pred eecCCCCCCCCCCeEEEEeCCCccCCCCCEEEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHhccC---C-ccc
Q 017499 230 IMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDLLG---P-VDE 305 (370)
Q Consensus 230 I~~~pi~~~~~~~s~~ii~P~~~~~~~~~v~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~ll~---~-~~~ 305 (370)
.++++. .....+++++... -..|. .....+...+|+|+.++++++.+...+++++++.+++-|. + .+.
T Consensus 275 ~~~~~~-----~~~~~~~~~~~~~--~~~i~-~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~~ 346 (421)
T 3nrn_A 275 AVPGEP-----RIGNTIVFTPGLM--INGFN-EPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGEP 346 (421)
T ss_dssp EEESSC-----SSCSSEEECTTSS--SCEEE-CGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTTCEE
T ss_pred EEcCCc-----ccCCeEEEcCCcc--eeeEe-ccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCCCeE
Confidence 444541 1122345554331 11121 1123344678999999999998776666666776666432 2 111
Q ss_pred eee-eeee---ccccC--CC--CCCCcEEEc-CCCCCCcch--HHHHHHHHHHHHhh
Q 017499 306 IFY-DIYD---RYEPV--NE--PSLDNCFIS-TSYDATTHF--ESTVTDVLNMYTMI 351 (370)
Q Consensus 306 ~~~-~~~~---~~~~~--~~--~~~~~v~~~-~~~d~~~~f--e~~~~~v~~i~~~i 351 (370)
..+ .+.+ .|.+. .+ -.++|++++ ..++..-.. |.++..++..=++|
T Consensus 347 ~~~~~~~~~~p~~~~~~~~~~~~~~~gl~laGd~~~~~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 347 LLAQVYRDGNPVNRTRAGLHIEWPLNEVLVVGDGYRPPGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp EEEEEC-------------CCCCCCSSEEECSTTCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEeeeccCCCCcccccCCCCCCCCCCcEEEECCcccCCCceeeehHHHHHHHHHHHh
Confidence 111 1111 12111 00 122889997 455533134 89999998888887
No 7
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.85 E-value=8.3e-07 Score=87.19 Aligned_cols=305 Identities=11% Similarity=0.125 Sum_probs=171.3
Q ss_pred hHHHhhhcCCCCceeeeEEeceeE-EEe--C--------CeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCC
Q 017499 11 ALVRVLIHTDVTKYLYFKAVDGSF-VYN--K--------GKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEND 79 (370)
Q Consensus 11 ~lv~~Li~s~v~~YleF~~l~~~y-~~~--~--------g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~ 79 (370)
.+.+++...+....+ ...+..+ .+. + ++.+.++.- ...+++.+|.++.+.+.......
T Consensus 64 ~~~~l~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--- 132 (425)
T 3ka7_A 64 PLACFLKEVEASVNI--VRSEMTTVRVPLKKGNPDYVKGFKDISFNDF------PSLLSYKDRMKIALLIVSTRKNR--- 132 (425)
T ss_dssp HHHHHHHHTTCCCCE--EECCCCEEEEESSTTCCSSTTCEEEEEGGGG------GGGSCHHHHHHHHHHHHHTTTSC---
T ss_pred HHHHHHHHhCCCceE--EecCCceEEeecCCCcccccccccceehhhh------hhhCCHHHHHHHHHHHHhhhhcC---
Confidence 556666666665333 3333333 232 1 555655531 24578888888777665433210
Q ss_pred CCcccccccchhhHHHHHHHcCCChhHHHHHHHhh--hcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCC
Q 017499 80 PKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHAL--ALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGL 157 (370)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~al--al~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~ 157 (370)
....++.++++.+.-++.+..++ ..+ .... .++...++...+..+..+...-|.+ +|.+|+
T Consensus 133 --------~~~~s~~~~l~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~-------~~~gG~ 195 (425)
T 3ka7_A 133 --------PSGSSLQAWIKSQVSDEWLIKFA-DSFCGWALS-LKSDEVPVEEVFEIIENMYRFGGTG-------IPEGGC 195 (425)
T ss_dssp --------CCSSBHHHHHHHHCCCHHHHHHH-HHHHHHHHS-SCGGGSBHHHHHHHHHHHHHHCSCE-------EETTSH
T ss_pred --------CCCCCHHHHHHHhcCCHHHHHHH-HHHHHHHhC-CCcccchHHHHHHHHHHHHhcCCcc-------ccCCCH
Confidence 02357778777665566565553 111 1111 1222345655666565553332333 899999
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCC------CCcc--------c----c
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY------LPNK--------V----R 219 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y------~p~~--------~----~ 219 (370)
+.|++++.+.+...|+.+++|++|++|..+ ++++.+|.++|+++.||.||++... ++.. . +
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ll~~~~~~~~~~~~~~~~~ 274 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIE-NGKAAGIIADDRIHDADLVISNLGHAATAVLCSEALSKEADAAYFKMVG 274 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECSCHHHHHHHTTTTCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEE-CCEEEEEEECCEEEECCEEEECCCHHHHHHhcCCcccccCCHHHHHHhh
Confidence 999999999999999999999999999985 6788999989999999999986542 1210 0 0
Q ss_pred cc--CeEEEEEEeecCCCCCCCCCCeEEEEeCCCccCCCCCEE-EEEec-CCccccCCCcEEEEEEeecCCCCc---ccc
Q 017499 220 KV--GRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMY-LFCCS-YSHNVAPKGKFIAFVSTEAETDHP---QTE 292 (370)
Q Consensus 220 ~~--~~v~R~i~I~~~pi~~~~~~~s~~ii~P~~~~~~~~~v~-v~~~~-~~~~~cP~G~~i~~~st~~~~~~~---~~~ 292 (370)
.. ..+....+.+++|... ...+++++.. . .+. +...| .+...+|+|+.+++++......+. +++
T Consensus 275 ~~~~~~~~~v~l~~~~~~~~-----~~~~~~~~~~---~-~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~ 345 (425)
T 3ka7_A 275 TLQPSAGIKICLAADEPLVG-----HTGVLLTPYT---R-RINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESE 345 (425)
T ss_dssp HCCCBEEEEEEEEESSCSSC-----SSSEEECCSS---S-SEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHH
T ss_pred CcCCCceEEEEeecCCCccC-----cCEEEECCCh---h-hcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHH
Confidence 11 1233333446666421 1234555432 1 232 22222 245678999999887664322221 233
Q ss_pred cHhHHh----ccCCccceee---eee---eccccCCC-----CCC-CcEEEc-CCCCC--CcchHHHHHHHHHHHHhhcC
Q 017499 293 LKPGID----LLGPVDEIFY---DIY---DRYEPVNE-----PSL-DNCFIS-TSYDA--TTHFESTVTDVLNMYTMITG 353 (370)
Q Consensus 293 l~~~~~----ll~~~~~~~~---~~~---~~~~~~~~-----~~~-~~v~~~-~~~d~--~~~fe~~~~~v~~i~~~i~g 353 (370)
++.+++ ++........ .|. ..|.+... ..| +|++++ .++.. -..-+.++-.++..-++|.|
T Consensus 346 ~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~gg~gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 346 IEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGKGGIEVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCTTCCHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCCCceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCCCCCccHHHHHHHHHHHHHhhC
Confidence 444444 2322211111 122 12332211 223 689997 45544 46779999999998888876
No 8
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.09 E-value=5.9e-05 Score=75.22 Aligned_cols=185 Identities=12% Similarity=0.062 Sum_probs=111.5
Q ss_pred CchHHHhhhcCCCCceeeeEEe--ceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCCCccccc
Q 017499 9 NGALVRVLIHTDVTKYLYFKAV--DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGM 86 (370)
Q Consensus 9 ~g~lv~~Li~s~v~~YleF~~l--~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~~~~~~~ 86 (370)
...+.++|-.-++..++.+... ...+++.+|+.+++|.+..+.++...++..++.++ + ..+.... . .
T Consensus 76 ~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~-~--~-- 144 (478)
T 2ivd_A 76 EPATRALAAALNLEGRIRAADPAAKRRYVYTRGRLRSVPASPPAFLASDILPLGARLRV---A---GELFSRR-A--P-- 144 (478)
T ss_dssp CHHHHHHHHHTTCGGGEECSCSSCCCEEEEETTEEEECCCSHHHHHTCSSSCHHHHHHH---H---GGGGCCC-C--C--
T ss_pred hHHHHHHHHHcCCcceeeecCccccceEEEECCEEEECCCCHHHhccCCCCCHHHHHHH---h---hhhhcCC-C--C--
Confidence 3456677877888776654332 24467789999999999988888777776665443 2 2222111 0 0
Q ss_pred ccchhhHHHHHHHcCCChhHHHHHHHhh--hcccCCCcCCcchHHHHHHHHHHHHhhhc---------------c--cC-
Q 017499 87 DLTRVTTRELIAKYGLDDNTIDFIGHAL--ALHRDDRYLNEPALDTVKRMKLYAESIAR---------------F--QG- 146 (370)
Q Consensus 87 ~~~~~~~~~~~~~~~L~~~l~~~i~~al--al~~~~~~~~~~~~~~l~ri~~yl~S~g~---------------y--~G- 146 (370)
...+.++.+++++.. .+.+.+.+...+ ..+. .++.+-++...+.++..+....|. + .+
T Consensus 145 ~~~~~s~~~~l~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (478)
T 2ivd_A 145 EGVDESLAAFGRRHL-GHRATQVLLDAVQTGIYA-GDVEQLSVAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGT 222 (478)
T ss_dssp TTCCCBHHHHHHHHT-CHHHHHHTHHHHHHHHHC-CCTTTBBHHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CC
T ss_pred CCCCCCHHHHHHHhh-CHHHHHHHHHHHhceeec-CCHHHhhHHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccc
Confidence 123568888876643 333333221111 1111 122223444555555444322110 0 01
Q ss_pred C----CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEECC
Q 017499 147 G----SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDP 211 (370)
Q Consensus 147 ~----sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge~i~a~~VV~~~ 211 (370)
. ..+.++.+|++.|++++.+.. |+.+++|++|.+|..++ ++ +.|.+ +|++++||.||+..
T Consensus 223 ~~~~~~~~~~~~gG~~~l~~~l~~~l---g~~i~~~~~V~~i~~~~-~~-~~v~~~~~~~g~~~~ad~vV~a~ 290 (478)
T 2ivd_A 223 APKLSGALSTFDGGLQVLIDALAASL---GDAAHVGARVEGLARED-GG-WRLIIEEHGRRAELSVAQVVLAA 290 (478)
T ss_dssp SCCCCCCEEEETTCTHHHHHHHHHHH---GGGEESSEEEEEEECC---C-CEEEEEETTEEEEEECSEEEECS
T ss_pred cccccccEEEECCCHHHHHHHHHHHh---hhhEEcCCEEEEEEecC-Ce-EEEEEeecCCCceEEcCEEEECC
Confidence 2 567899999999999998765 78999999999998753 33 45654 68889999999864
No 9
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.94 E-value=0.00035 Score=70.73 Aligned_cols=186 Identities=15% Similarity=0.192 Sum_probs=109.7
Q ss_pred chHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC--Ccccc--
Q 017499 10 GALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP--KTHEG-- 85 (370)
Q Consensus 10 g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~--~~~~~-- 85 (370)
..+.+++-+-++..+..+.. ...+.+.+|+.+..|.. + ...+++.+...+.+|+..+.+....-. ..+..
T Consensus 66 ~~~~~l~~~lgl~~~~~~~~-~~~~~~~~g~~~~~~~~----~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (520)
T 1s3e_A 66 NRILRLAKELGLETYKVNEV-ERLIHHVKGKSYPFRGP----F-PPVWNPITYLDHNNFWRTMDDMGREIPSDAPWKAPL 139 (520)
T ss_dssp HHHHHHHHHTTCCEEECCCS-SEEEEEETTEEEEECSS----S-CCCCSHHHHHHHHHHHHHHHHHHTTSCTTCGGGSTT
T ss_pred HHHHHHHHHcCCcceecccC-CceEEEECCEEEEecCC----C-CCCCCHHHHHHHHHHHHHHHHHHhhcCcCCCccccc
Confidence 35666666677765543321 22334567777776643 1 112566666666677665544322100 00110
Q ss_pred -cccchhhHHHHHHHcCCChhHHHHHHHhhh-cccCCCcCCcchHHHHHHHHHHHHhhhc----c--cCCCceeecCCCC
Q 017499 86 -MDLTRVTTRELIAKYGLDDNTIDFIGHALA-LHRDDRYLNEPALDTVKRMKLYAESIAR----F--QGGSPYIYPLYGL 157 (370)
Q Consensus 86 -~~~~~~~~~~~~~~~~L~~~l~~~i~~ala-l~~~~~~~~~~~~~~l~ri~~yl~S~g~----y--~G~sPflyp~yG~ 157 (370)
....+.++.+++++...++.++.++...+. ... .++.+.++...+ .|+...|. + .+...+.++.+|+
T Consensus 140 ~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~g-~~~~~~s~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~gG~ 214 (520)
T 1s3e_A 140 AEEWDNMTMKELLDKLCWTESAKQLATLFVNLCVT-AETHEVSALWFL----WYVKQCGGTTRIISTTNGGQERKFVGGS 214 (520)
T ss_dssp HHHHHTSBHHHHHHHHCSSHHHHHHHHHHHHHHHS-SCTTTSBHHHHH----HHHHTTTCHHHHHCSTTSTTSEEETTCT
T ss_pred hhhhhccCHHHHHHhhCCCHHHHHHHHHHHhhhcC-CChHHhHHHHHH----HHHhhcCchhhhcccCCCcceEEEeCCH
Confidence 012456899999988888888776532211 111 122233454443 33332221 1 0234567889999
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
+.|++++++. .|+.+++|++|.+|..+ ++++. |.+ +|+++.||+||+..
T Consensus 215 ~~l~~~l~~~---lg~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~VI~a~ 264 (520)
T 1s3e_A 215 GQVSERIMDL---LGDRVKLERPVIYIDQT-RENVL-VETLNHEMYEAKYVISAI 264 (520)
T ss_dssp HHHHHHHHHH---HGGGEESSCCEEEEECS-SSSEE-EEETTSCEEEESEEEECS
T ss_pred HHHHHHHHHH---cCCcEEcCCeeEEEEEC-CCeEE-EEECCCeEEEeCEEEECC
Confidence 9999998764 38899999999999875 45555 665 78899999999754
No 10
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.89 E-value=5.9e-05 Score=75.08 Aligned_cols=64 Identities=17% Similarity=0.170 Sum_probs=54.7
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
..++.++.+|++.|++++++.....|+.+++|++|.+|..+ +++.+.|.++|+.+.||+||+..
T Consensus 223 ~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~-~~~~~~v~~~~~~~~ad~vv~a~ 286 (477)
T 3nks_A 223 RWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQ-AEGRWKVSLRDSSLEADHVISAI 286 (477)
T ss_dssp TCSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEC-GGGCEEEECSSCEEEESEEEECS
T ss_pred CccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEc-CCceEEEEECCeEEEcCEEEECC
Confidence 34678999999999999999999999999999999999875 34445677788889999999764
No 11
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.75 E-value=0.00061 Score=67.28 Aligned_cols=188 Identities=16% Similarity=0.195 Sum_probs=103.4
Q ss_pred chHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhh----cccCCCCccc-
Q 017499 10 GALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQD----YDENDPKTHE- 84 (370)
Q Consensus 10 g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~----~~~~~~~~~~- 84 (370)
..+.+++.+-++..+..+..-...+...+|+.+.++.+. ..+++.+...+.+++..... .....+....
T Consensus 66 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (453)
T 2yg5_A 66 TALISLLDELGLKTFERYREGESVYISSAGERTRYTGDS------FPTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPL 139 (453)
T ss_dssp HHHHHHHHHTTCCEEECCCCSEEEEECTTSCEEEECSSS------CSCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTT
T ss_pred HHHHHHHHHcCCcccccccCCCEEEEeCCCceeeccCCC------CCCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcc
Confidence 456677777777766554332222333336666554321 11334333344444332222 1111100000
Q ss_pred ccccchhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcC-CcchHHHHHHHHHHHHhhhccc-----CCCceeecCCCCC
Q 017499 85 GMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYL-NEPALDTVKRMKLYAESIARFQ-----GGSPYIYPLYGLG 158 (370)
Q Consensus 85 ~~~~~~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~-~~~~~~~l~ri~~yl~S~g~y~-----G~sPflyp~yG~g 158 (370)
.......++.++++++..++.+++++...+...-..+.. +.++...+. ++...|.+. ++..+.++.+|++
T Consensus 140 ~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~gG~~ 215 (453)
T 2yg5_A 140 ARDLDTVSFKQWLINQSDDAEARDNIGLFIAGGMLTKPAHSFSALQAVL----MAASAGSFSHLVDEDFILDKRVIGGMQ 215 (453)
T ss_dssp HHHHHSSBHHHHHHHHCSCHHHHHHHHHHHCCCCCCSCTTSSBHHHHHH----HHHHTTCHHHHHCHHHHTCEEETTCTH
T ss_pred hhhhhhccHHHHHHhhcCCHHHHHHHHHHHHhhcccCCcccccHHHHHH----HhccCCcHhhhccCCCcceEEEcCChH
Confidence 001235689999988888988888753322111111222 344554443 232212110 0123568999999
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
.|++++++. .|+.+++|++|++|..+ +++.+.|.++|+++.||+||+..
T Consensus 216 ~l~~~l~~~---lg~~i~~~~~V~~i~~~-~~~~v~v~~~~~~~~ad~VI~a~ 264 (453)
T 2yg5_A 216 QVSIRMAEA---LGDDVFLNAPVRTVKWN-ESGATVLADGDIRVEASRVILAV 264 (453)
T ss_dssp HHHHHHHHH---HGGGEECSCCEEEEEEE-TTEEEEEETTTEEEEEEEEEECS
T ss_pred HHHHHHHHh---cCCcEEcCCceEEEEEe-CCceEEEEECCeEEEcCEEEEcC
Confidence 999999764 48999999999999875 44424476789999999999764
No 12
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.55 E-value=0.00071 Score=67.33 Aligned_cols=187 Identities=12% Similarity=0.170 Sum_probs=108.1
Q ss_pred CchHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccC--------CHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC
Q 017499 9 NGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPA--------TDMEALKSPLMGIFEKRRARKFFIYVQDYDENDP 80 (370)
Q Consensus 9 ~g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~--------s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~ 80 (370)
...+.+++..-++...+....-...|++.+|+++.+|. +....++...++..+|..++.++. .....
T Consensus 66 ~~~~~~l~~~lg~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 140 (475)
T 3lov_A 66 KHILTDLIEAIGLGEKLVRNNTSQAFILDTGGLHPIPKGAVMGIPTDLDLFRQTTLLTEEEKQEVADLLL---HPSDS-- 140 (475)
T ss_dssp STHHHHHHHHTTCGGGEEECCCCCEEEEETTEEEECCSSEETTEESCHHHHTTCSSSCHHHHHHHHHHHH---SCCTT--
T ss_pred cHHHHHHHHHcCCcceEeecCCCceEEEECCEEEECCCcccccCcCchHHHhhccCCChhHHHHhhCccc---CCccc--
Confidence 45677788888888776544355567788999888765 356777788888877763333322 11110
Q ss_pred CcccccccchhhHHHHHHHcCCChhHHHHHHHhh--hcccCCCcCCcchHHHHHHHHHHHHhhhccc-------------
Q 017499 81 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHAL--ALHRDDRYLNEPALDTVKRMKLYAESIARFQ------------- 145 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~al--al~~~~~~~~~~~~~~l~ri~~yl~S~g~y~------------- 145 (370)
......+.++.++++.. ..+.+.+.+...+ +.+.. +..+-++...++.+..+....|.+.
T Consensus 141 ---~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~-~~~~ls~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 215 (475)
T 3lov_A 141 ---LRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAG-NIDQMSTFATYPQFVANEQKAGSLFEGMRLMRPLDQLP 215 (475)
T ss_dssp ---CCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCC-CTTTSBSTTTCHHHHHHHHHHSSHHHHHHHTCC-----
T ss_pred ---ccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecC-ChHHcCHHHHHHHHHHHHHhcCcHHHHHHHhccccccc
Confidence 00011345777766542 2233333211111 11111 1111122222333333332222110
Q ss_pred --------CCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 146 --------GGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 146 --------G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.+..+.++..|++.|++++++.... +.+++|++|.+|..+ ++. ..|.+ +| .+.||+||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~-~~~-~~v~~~~g-~~~ad~vV~a 284 (475)
T 3lov_A 216 QTPQTTIKATGQFLSLETGLESLIERLEEVLER--SEIRLETPLLAISRE-DGR-YRLKTDHG-PEYADYVLLT 284 (475)
T ss_dssp ---------CCSEEEETTCHHHHHHHHHHHCSS--CEEESSCCCCEEEEE-TTE-EEEECTTC-CEEESEEEEC
T ss_pred ccccccccCCCcEEeeCChHHHHHHHHHhhccC--CEEEcCCeeeEEEEe-CCE-EEEEECCC-eEECCEEEEC
Confidence 1467889999999999998876544 799999999999875 344 34665 67 8999999975
No 13
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.44 E-value=0.00068 Score=66.80 Aligned_cols=253 Identities=11% Similarity=0.109 Sum_probs=121.5
Q ss_pred CchHHHhhhcCCCCceeeeEEeceeEEEeCCeEEEccCCH--------HHHHhCCCCCHHHHHHHHHHHHHHhhcccCCC
Q 017499 9 NGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATD--------MEALKSPLMGIFEKRRARKFFIYVQDYDENDP 80 (370)
Q Consensus 9 ~g~lv~~Li~s~v~~YleF~~l~~~y~~~~g~~~~VP~s~--------~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~ 80 (370)
...+.+++-+-++...+........|++.+|+++.+|.+. ...+.+..++..+|.+.. +.......
T Consensus 71 ~~~~~~l~~~lgl~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---- 144 (470)
T 3i6d_A 71 KKSAPQLVKDLGLEHLLVNNATGQSYVLVNRTLHPMPKGAVMGIPTKIAPFVSTGLFSLSGKARAA--MDFILPAS---- 144 (470)
T ss_dssp CTHHHHHHHHTTCCTTEEECCCCCEEEECSSCEEECCC---------------------CCSHHHH--HHHHSCCC----
T ss_pred CHHHHHHHHHcCCcceeecCCCCccEEEECCEEEECCCCcccCCcCchHHhhccCcCCHHHHHHHh--cCcccCCC----
Confidence 4557778888888877664335556778888888877532 333334444443332211 11111100
Q ss_pred CcccccccchhhHHHHHHHcCCChhHHHHHHHhh--hcccCCCcCCcchHHHHHHHHHHHHhhhccc-------------
Q 017499 81 KTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHAL--ALHRDDRYLNEPALDTVKRMKLYAESIARFQ------------- 145 (370)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~L~~~l~~~i~~al--al~~~~~~~~~~~~~~l~ri~~yl~S~g~y~------------- 145 (370)
. ...+.++.++++... .....+.+...+ +++.. +..+-++...++.+..+....|...
T Consensus 145 ---~--~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (470)
T 3i6d_A 145 ---K--TKDDQSLGEFFRRRV-GDEVVENLIEPLLSGIYAG-DIDKLSLMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQ 217 (470)
T ss_dssp ---S--SSSCCBHHHHHHHHS-CHHHHHHTHHHHHHHTTCS-CTTTBBHHHHCGGGCC----------------------
T ss_pred ---C--CCCCcCHHHHHHHhc-CHHHHHHhccchhcEEecC-CHHHhhHHHHHHHHHHHHHhcCcHHHHHHhhccccccc
Confidence 0 113457777775532 222322211111 22221 1111122222222222211111110
Q ss_pred -----CCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC-CC----
Q 017499 146 -----GGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS-YL---- 214 (370)
Q Consensus 146 -----G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~-y~---- 214 (370)
...++.++.+|++.|++++++.... +.+++|++|.+|..++ ++ ..|.+ +|+++.||+||+... +.
T Consensus 218 ~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~-~~-~~v~~~~g~~~~ad~vi~a~p~~~~~~l 293 (470)
T 3i6d_A 218 QLTAKKQGQFQTLSTGLQTLVEEIEKQLKL--TKVYKGTKVTKLSHSG-SC-YSLELDNGVTLDADSVIVTAPHKAAAGM 293 (470)
T ss_dssp ---------EEEETTCTHHHHHHHHHTCCS--EEEECSCCEEEEEECS-SS-EEEEESSSCEEEESEEEECSCHHHHHHH
T ss_pred cccccCCceEEEeCChHHHHHHHHHHhcCC--CEEEeCCceEEEEEcC-Ce-EEEEECCCCEEECCEEEECCCHHHHHHH
Confidence 1347889999999999999886644 7999999999998753 44 34665 788999999997532 11
Q ss_pred -Cc-c----ccc--cCeEEEEEEeecCCCCCCCCCCeEEEEeCCCccCCCCCEEEEEecC--CccccCCCcEEEEEEe
Q 017499 215 -PN-K----VRK--VGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYLFCCSY--SHNVAPKGKFIAFVST 282 (370)
Q Consensus 215 -p~-~----~~~--~~~v~R~i~I~~~pi~~~~~~~s~~ii~P~~~~~~~~~v~v~~~~~--~~~~cP~G~~i~~~st 282 (370)
+. . .+. .+.+....+..+.|.-.. .......++|..+ ...++-+...+ ....+|.|..++.+..
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~-~~~~~g~l~~~~~---~~~~~~~~~~s~~~~~~~p~~~~~l~~~~ 367 (470)
T 3i6d_A 294 LSELPAISHLKNMHSTSVANVALGFPEGSVQM-EHEGTGFVISRNS---DFAITACTWTNKKWPHAAPEGKTLLRAYV 367 (470)
T ss_dssp TTTSTTHHHHHTCEEEEEEEEEEEESSTTCCC-SSCSSEEEECSTT---CCSEEEEEEHHHHCGGGSCTTCEEEEEEE
T ss_pred cCCchhhHHHhcCCCCceEEEEEEECchhcCC-CCCCeEEEccCCC---CCCceEEEEEcCcCCCcCCCCCEEEEEEE
Confidence 11 0 011 124555555667765321 1223345566543 12343223222 2345788887765554
No 14
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.35 E-value=0.0013 Score=65.90 Aligned_cols=191 Identities=9% Similarity=0.040 Sum_probs=104.9
Q ss_pred chHHHhhhcCCCCceeeeEEe-ceeEEEeCCeEEEccCCHHHHHhCCCCCHHHHHHHHHHHHHHhhcccCCCCccccccc
Q 017499 10 GALVRVLIHTDVTKYLYFKAV-DGSFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDL 88 (370)
Q Consensus 10 g~lv~~Li~s~v~~YleF~~l-~~~y~~~~g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~~v~~~~~~~~~~~~~~~~ 88 (370)
..+.++|-.-++.+.+.|... ...|++.+|+.+.+|.+..+.+....++..+|-++.. ......... +. . ...
T Consensus 74 ~~~~~~~~~lgl~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~--~-~~~ 147 (504)
T 1sez_A 74 GDVTFLIDSLGLREKQQFPLSQNKRYIARNGTPVLLPSNPIDLIKSNFLSTGSKLQMLL--EPILWKNKK-LS--Q-VSD 147 (504)
T ss_dssp HHHHHHHHHTTCGGGEECCSSCCCEEEESSSSEEECCSSHHHHHHSSSSCHHHHHHHHT--HHHHC--------------
T ss_pred HHHHHHHHHcCCcccceeccCCCceEEEECCeEEECCCCHHHHhccccCCHHHHHHHhH--hhhccCccc-cc--c-cCC
Confidence 456777878888877766432 2346788999999999988888877777766544321 111110000 00 0 011
Q ss_pred chhhHHHHHHHcCCChhHHHHHHHhh--hcccCCCcCCcchHHHHHHHHHHHHh------------hhcccC--------
Q 017499 89 TRVTTRELIAKYGLDDNTIDFIGHAL--ALHRDDRYLNEPALDTVKRMKLYAES------------IARFQG-------- 146 (370)
Q Consensus 89 ~~~~~~~~~~~~~L~~~l~~~i~~al--al~~~~~~~~~~~~~~l~ri~~yl~S------------~g~y~G-------- 146 (370)
.+.++.++++++.-++.+..++ ..+ +.+.. +..+.++...++.+...... +..+.+
T Consensus 148 ~~~s~~~~l~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 225 (504)
T 1sez_A 148 SHESVSGFFQRHFGKEVVDYLI-DPFVAGTCGG-DPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKT 225 (504)
T ss_dssp CCCBHHHHHHHHHCHHHHHTTH-HHHHHHHHSC-CGGGSBHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CC
T ss_pred CCccHHHHHHHHcCHHHHHHHH-HHHHccccCC-ChHHhhHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccch
Confidence 2468888775542222222222 111 11111 11112233333332222111 111100
Q ss_pred ------CCceeecCCCCCcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCCc----EEEEEe---CC---eEEEcCEEEE
Q 017499 147 ------GSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGK----VVGVTS---EG---ETAKCKKVVC 209 (370)
Q Consensus 147 ------~sPflyp~yG~geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~~----~~gV~~---~g---e~i~a~~VV~ 209 (370)
...+.++.+|++.|++++++. .| +.++||++|.+|..++++. .+.|.. +| +.+.||+||+
T Consensus 226 ~~~~~~~~~~~~~~GG~~~l~~~l~~~---l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~ 302 (504)
T 1sez_A 226 SANKKRQRGSFSFLGGMQTLTDAICKD---LREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIM 302 (504)
T ss_dssp CSCCSTTCSCBEETTCTHHHHHHHHTT---SCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEE
T ss_pred hhccccCCceEeeCcHHHHHHHHHHhh---cccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEE
Confidence 123668899999999998863 45 7899999999999864442 244543 45 6889999998
Q ss_pred CC
Q 017499 210 DP 211 (370)
Q Consensus 210 ~~ 211 (370)
+.
T Consensus 303 a~ 304 (504)
T 1sez_A 303 TA 304 (504)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.31 E-value=0.00024 Score=71.08 Aligned_cols=62 Identities=21% Similarity=0.200 Sum_probs=51.7
Q ss_pred CCceeec-CCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 147 GSPYIYP-LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPflyp-~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
...|.|| ++|++.|++++++.....|+.+++|++|.+|..+ ++++ +..+|+++.||+||+..
T Consensus 210 ~~~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~-~~~v--~~~~G~~~~ad~vI~t~ 272 (513)
T 4gde_A 210 NATFRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNAN-NKTV--TLQDGTTIGYKKLVSTM 272 (513)
T ss_dssp TBEEEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETT-TTEE--EETTSCEEEEEEEEECS
T ss_pred ccceeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEcc-CCEE--EEcCCCEEECCEEEECC
Confidence 5566666 6889999999999999999999999999999864 4433 23589999999999864
No 16
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.23 E-value=0.00052 Score=68.79 Aligned_cols=193 Identities=13% Similarity=0.036 Sum_probs=105.6
Q ss_pred CchHHHhhhcCCCCceeeeEE----eceeEEEeC--CeEEEccCCHHHHHhCCCCCHHHHHHHHHHHH----HHhhcccC
Q 017499 9 NGALVRVLIHTDVTKYLYFKA----VDGSFVYNK--GKVHKVPATDMEALKSPLMGIFEKRRARKFFI----YVQDYDEN 78 (370)
Q Consensus 9 ~g~lv~~Li~s~v~~YleF~~----l~~~y~~~~--g~~~~VP~s~~evf~s~~ls~~eKr~lmkFL~----~v~~~~~~ 78 (370)
...+.++|-+-++.+.+.... -...|++.+ |+...+|... ... . -.+.+.+|++ ........
T Consensus 99 ~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~-----~-~~~~~~~~~~~~~~~~~~~~~~ 170 (495)
T 2vvm_A 99 QSHVWREITRYKMHNALSPSFNFSRGVNHFQLRTNPTTSTYMTHEA--EDE-----L-LRSALHKFTNVDGTNGRTVLPF 170 (495)
T ss_dssp SHHHHHHHHHTTCTTCEEESCCCSSSCCEEEEESSTTCCEEECHHH--HHH-----H-HHHHHHHHHCSSSSTTTTTCSC
T ss_pred cHHHHHHHHHcCCcceeecccccCCCceEEEecCCCCceeecCHHH--HHH-----H-HHHHHHHHHccchhhhhhcCCC
Confidence 345667777777766555442 123456666 6777777521 110 0 1123334444 11111100
Q ss_pred CCCcc---cccccchhhHHHHHHHcC--CChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeec
Q 017499 79 DPKTH---EGMDLTRVTTRELIAKYG--LDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYP 153 (370)
Q Consensus 79 ~~~~~---~~~~~~~~~~~~~~~~~~--L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp 153 (370)
..... ....+.+.++.++++.++ +++.+++++...+......++.+.++...+..+.....+++.+.+...+.++
T Consensus 171 ~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (495)
T 2vvm_A 171 PHDMFYVPEFRKYDEMSYSERIDQIRDELSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKF 250 (495)
T ss_dssp TTSTTSSTTHHHHHTSBHHHHHHHHGGGCCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEE
T ss_pred CCCcccCcchhhhhhhhHHHHHHHhhccCCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEe
Confidence 00000 000123568889988887 8887776653222211111222334444443322211111111011223378
Q ss_pred CCCCCcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 154 LYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 154 ~yG~geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.+|+++|++++.+.+...| +.+++|++|.+|..+ ++.+ .|.+ +|+.++||+||+..
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~-~~~v-~v~~~~g~~~~ad~vI~a~ 308 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNE-RDAA-RVTARDGREFVAKRVVCTI 308 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEEC-SSSE-EEEETTCCEEEEEEEEECC
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEc-CCEE-EEEECCCCEEEcCEEEECC
Confidence 8999999999999999998 999999999999875 3443 4655 68889999999754
No 17
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.84 E-value=0.053 Score=52.69 Aligned_cols=113 Identities=13% Similarity=0.111 Sum_probs=66.1
Q ss_pred hhhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcHHHHHHHHHH
Q 017499 90 RVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSA 169 (370)
Q Consensus 90 ~~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI~Qaf~RlaA 169 (370)
..|+.+++++.+.+. +.+.+...+....-.++.+.|+...+..+..+ .-+ .+ ...+......|+.+|++++.+
T Consensus 142 ~~s~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~-~~-~~~~~~~~~~g~~~l~~~l~~--- 214 (424)
T 2b9w_A 142 MLPFDEFLALNGCEA-ARDLWINPFTAFGYGHFDNVPAAYVLKYLDFV-TMM-SF-AKGDLWTWADGTQAMFEHLNA--- 214 (424)
T ss_dssp GSBHHHHHHHTTCGG-GHHHHTTTTCCCCCCCTTTSBHHHHHHHSCHH-HHH-HH-HHTCCBCCTTCHHHHHHHHHH---
T ss_pred ccCHHHHHHhhCcHH-HHHHHHHHHHhhccCChHhcCHHHHHHhhhHh-hhh-cc-cCCceEEeCChHHHHHHHHHH---
Confidence 478999998888775 55443222211111233345665553222211 001 11 112233567788888887754
Q ss_pred HhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 170 VYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 170 v~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
..++..++|++|++|..+ ++++. |.+++..+.||.||++.
T Consensus 215 ~l~~~v~~~~~V~~i~~~-~~~v~-v~~~~g~~~ad~Vv~a~ 254 (424)
T 2b9w_A 215 TLEHPAERNVDITRITRE-DGKVH-IHTTDWDRESDVLVLTV 254 (424)
T ss_dssp HSSSCCBCSCCEEEEECC-TTCEE-EEESSCEEEESEEEECS
T ss_pred hhcceEEcCCEEEEEEEE-CCEEE-EEECCCeEEcCEEEECC
Confidence 456778999999999875 45554 77643348999999864
No 18
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=94.68 E-value=0.038 Score=54.88 Aligned_cols=61 Identities=15% Similarity=0.158 Sum_probs=48.5
Q ss_pred ceeecCCCCCcHHHHHHHHHHHh--------CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 149 PYIYPLYGLGELPQAFARLSAVY--------GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 149 Pflyp~yG~geI~Qaf~RlaAv~--------Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
-++++..|++.|++++++..... |+.+++|++|.+|..+ ++++. |.+ +|+++.||+||+..
T Consensus 197 ~~~~~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vI~a~ 266 (472)
T 1b37_A 197 YFVADQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYS-PGGVT-VKTEDNSVYSADYVMVSA 266 (472)
T ss_dssp EEECCTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEEC-SSCEE-EEETTSCEEEESEEEECS
T ss_pred eeeecCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEc-CCcEE-EEECCCCEEEcCEEEEec
Confidence 44556889999999998876543 7899999999999885 45555 665 78899999999863
No 19
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=94.63 E-value=0.18 Score=48.97 Aligned_cols=109 Identities=14% Similarity=0.044 Sum_probs=65.5
Q ss_pred hhHHHHHHHcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhh------cccCCCceeecCCCCCcHHHHH
Q 017499 91 VTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIA------RFQGGSPYIYPLYGLGELPQAF 164 (370)
Q Consensus 91 ~~~~~~~~~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g------~y~G~sPflyp~yG~geI~Qaf 164 (370)
.++.++++..++++....++...+.........+-+..+.+ .++...| .+ +. .. .+..|+..+.+++
T Consensus 141 ~s~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~----~~~~~~~~~~~~~~~-~~-~~-~~~~g~~~l~~~~ 213 (431)
T 3k7m_X 141 IPLNEYVDKLDLPPVSRQFLLAWAWNMLGQPADQASALWML----QLVAAHHYSILGVVL-SL-DE-VFSNGSADLVDAM 213 (431)
T ss_dssp SBHHHHHHHHTCCHHHHHHHHHHHHHHHSSCTTTSBHHHHH----HHHHHTTSCHHHHHH-TC-CE-EETTCTHHHHHHH
T ss_pred CCHHHHHHhcCCCHHHHHHHHHHHHHhcCCChhhhhHHHHH----HHHHhcCCccceeec-ch-hh-hcCCcHHHHHHHH
Confidence 67888888888888777654222211111111122333333 2333221 12 21 22 6677888887766
Q ss_pred HHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 165 ARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 165 ~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
. +..| .+++|++|++|..+ ++.+. |.+ +|+++.||+||+...
T Consensus 214 ~---~~~g-~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~ad~vi~a~~ 256 (431)
T 3k7m_X 214 S---QEIP-EIRLQTVVTGIDQS-GDVVN-VTVKDGHAFQAHSVIVATP 256 (431)
T ss_dssp H---TTCS-CEESSCCEEEEECS-SSSEE-EEETTSCCEEEEEEEECSC
T ss_pred H---hhCC-ceEeCCEEEEEEEc-CCeEE-EEECCCCEEEeCEEEEecC
Confidence 5 3456 99999999999865 34443 655 788899999998654
No 20
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.43 E-value=0.082 Score=51.63 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=51.1
Q ss_pred ceeecCC-C---CCcHHHHHHHHHHHhCcEEEcCC---ccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 149 PYIYPLY-G---LGELPQAFARLSAVYGGTYMLNK---PECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 149 Pflyp~y-G---~geI~Qaf~RlaAv~Gg~y~L~~---~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.+.+|.. | ...+.+++.+.+...|+.+++++ +|.+|..+ ++++.||.+ +|++++||.||...
T Consensus 148 g~~~~~~~g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~-~~~v~gV~t~~G~~i~Ad~VV~At 217 (438)
T 3dje_A 148 GYFARSGAGWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE-NNDVKGAVTADGKIWRAERTFLCA 217 (438)
T ss_dssp EEEESSSCEEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE-TTEEEEEEETTTEEEECSEEEECC
T ss_pred EEEeCCCCEEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec-CCeEEEEEECCCCEEECCEEEECC
Confidence 3445555 5 35899999999999999999999 99999875 678999987 68799999998643
No 21
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.27 E-value=0.64 Score=46.04 Aligned_cols=60 Identities=18% Similarity=0.181 Sum_probs=45.3
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCe----EEEcCEEEECC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE----TAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge----~i~a~~VV~~~ 211 (370)
...+.++.+|++.|++++.+... ..++||++|.+|..+ ++++ .|.+ +|+ ++.||+||+..
T Consensus 230 ~~~~~~~~gG~~~l~~~l~~~l~---~~i~~~~~V~~I~~~-~~~v-~v~~~~~~~~~~~~~ad~vI~t~ 294 (498)
T 2iid_A 230 EKRFDEIVDGMDKLPTAMYRDIQ---DKVHFNAQVIKIQQN-DQKV-TVVYETLSKETPSVTADYVIVCT 294 (498)
T ss_dssp CCCEEEETTCTTHHHHHHHHHTG---GGEESSCEEEEEEEC-SSCE-EEEEECSSSCCCEEEESEEEECS
T ss_pred CcceEEeCCcHHHHHHHHHHhcc---cccccCCEEEEEEEC-CCeE-EEEEecCCcccceEEeCEEEECC
Confidence 34566889999999999987653 379999999999875 4444 4543 554 58999999864
No 22
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.97 E-value=0.17 Score=50.14 Aligned_cols=60 Identities=15% Similarity=0.233 Sum_probs=47.2
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCCcEEEEEe-CC---eEEEcCEEEECC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS-EG---ETAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~~~~gV~~-~g---e~i~a~~VV~~~ 211 (370)
...+.++.+|++.|++++.+. .| +.++||++|.+|..+ ++++. |.+ +| +++.||+||+..
T Consensus 228 ~~~~~~~~gG~~~l~~~l~~~---l~~~~i~~~~~V~~i~~~-~~~v~-v~~~~g~~~~~~~ad~vI~a~ 292 (489)
T 2jae_A 228 AMMMFTPVGGMDRIYYAFQDR---IGTDNIVFGAEVTSMKNV-SEGVT-VEYTAGGSKKSITADYAICTI 292 (489)
T ss_dssp SSSEEEETTCTTHHHHHHHHH---HCGGGEETTCEEEEEEEE-TTEEE-EEEEETTEEEEEEESEEEECS
T ss_pred CccEEeecCCHHHHHHHHHHh---cCCCeEEECCEEEEEEEc-CCeEE-EEEecCCeEEEEECCEEEECC
Confidence 456778999999999998874 34 789999999999875 44444 543 55 689999999864
No 23
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=92.82 E-value=0.22 Score=48.45 Aligned_cols=64 Identities=17% Similarity=0.132 Sum_probs=53.5
Q ss_pred ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 152 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 152 yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.+.....++.+.+.+..+..|+.+++++.|++|..+ ++++.+|.. +|+.+.||.||....+.|.
T Consensus 188 l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 188 LARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGD-GTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp TTTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEES-SSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred hhhhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 333335688999999999999999999999999864 678888986 8999999999998777764
No 24
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=92.65 E-value=0.2 Score=48.71 Aligned_cols=69 Identities=20% Similarity=0.268 Sum_probs=56.2
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
..|-+.+.....++.+.+.+..+..|+.+++++.|++|..+ ++++.+|.. +|+.+.||.||....+-|.
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 173 LAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAE-GDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp SSSSTTTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCCcchhhccCHHHHHHHHHHHHhCCcEEEECCEEEEEEec-CCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 44444555456789999999999999999999999999864 578888986 8999999999988766654
No 25
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.24 E-value=0.28 Score=46.30 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=48.7
Q ss_pred eeecCCC---CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 150 YIYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 150 flyp~yG---~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
..+|..| ...+.+++.+.+...|+.++++++|.+|..+ +++ ++|++++..++||.||....
T Consensus 143 ~~~~~~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~-~~V~t~~g~i~a~~VV~A~G 206 (381)
T 3nyc_A 143 TYDPTGADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRV-DGA-WEVRCDAGSYRAAVLVNAAG 206 (381)
T ss_dssp EEETTCEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEE-TTE-EEEECSSEEEEESEEEECCG
T ss_pred EEcCCCceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEe-CCe-EEEEeCCCEEEcCEEEECCC
Confidence 3466666 2589999999999999999999999999875 444 67887555899999996543
No 26
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=91.83 E-value=0.39 Score=45.62 Aligned_cols=54 Identities=20% Similarity=0.190 Sum_probs=45.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
..+.+++.+.+...|+.++.+++|.+|..+ ++++.+|.+++..++||.||....
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~v~gv~~~~g~i~a~~VV~A~G 202 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIE-NNEIKGVKTNKGIIKTGIVVNATN 202 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTEEEECSEEEECCG
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEE-CCEEEEEEECCcEEECCEEEECcc
Confidence 478899999999999999999999999875 577888887545899999996543
No 27
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=91.64 E-value=0.32 Score=48.04 Aligned_cols=76 Identities=17% Similarity=0.276 Sum_probs=57.1
Q ss_pred HHHHHHhhhc-cc-CCCceeecCCC-CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEE
Q 017499 134 MKLYAESIAR-FQ-GGSPYIYPLYG-LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVC 209 (370)
Q Consensus 134 i~~yl~S~g~-y~-G~sPflyp~yG-~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~ 209 (370)
+..++..+|. |. .....+||.-+ ..+|.+++.+.+...|+.+++++.|.+|..+ ++++.+|.+ +|+.++||.||.
T Consensus 107 ~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~-~~~v~~V~~~~G~~i~Ad~VVl 185 (447)
T 2i0z_A 107 IITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYE-NGQTKAVILQTGEVLETNHVVI 185 (447)
T ss_dssp HHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTCCEEECSCEEE
T ss_pred HHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEec-CCcEEEEEECCCCEEECCEEEE
Confidence 3455565543 10 12345677655 5689999999999999999999999999875 677788886 677799999885
Q ss_pred C
Q 017499 210 D 210 (370)
Q Consensus 210 ~ 210 (370)
.
T Consensus 186 A 186 (447)
T 2i0z_A 186 A 186 (447)
T ss_dssp C
T ss_pred C
Confidence 4
No 28
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=90.44 E-value=0.26 Score=49.37 Aligned_cols=195 Identities=11% Similarity=0.076 Sum_probs=106.8
Q ss_pred CCceeecC-CCCCcHHHHHHHHHHHhCcEEEcC--CccceEEEcCCCcEEEEE-eCCeEEEcCEEEECCCC---------
Q 017499 147 GSPYIYPL-YGLGELPQAFARLSAVYGGTYMLN--KPECKVEFDEEGKVVGVT-SEGETAKCKKVVCDPSY--------- 213 (370)
Q Consensus 147 ~sPflyp~-yG~geI~Qaf~RlaAv~Gg~y~L~--~~V~~I~~~~~~~~~gV~-~~ge~i~a~~VV~~~~y--------- 213 (370)
..-|.||. +|++.|++++++.... ...++| ++|.+|..+ +++ |. .+|+++.||+||+...-
T Consensus 204 ~~~f~yp~~gG~~~l~~~la~~l~~--~~i~~~~~~~V~~I~~~-~~~---v~~~~G~~~~ad~VI~a~p~~~~~~ll~~ 277 (484)
T 4dsg_A 204 NATFRFPQRGGTGIIYQAIKEKLPS--EKLTFNSGFQAIAIDAD-AKT---ITFSNGEVVSYDYLISTVPFDNLLRMTKG 277 (484)
T ss_dssp TSEEEEESSSCTHHHHHHHHHHSCG--GGEEECGGGCEEEEETT-TTE---EEETTSCEEECSEEEECSCHHHHHHHEEC
T ss_pred cceEEeecCCCHHHHHHHHHhhhhh--CeEEECCCceeEEEEec-CCE---EEECCCCEEECCEEEECCCHHHHHHHhhc
Confidence 44588998 5899999999886543 278999 569999864 443 33 47889999999986421
Q ss_pred ----CCcccc----cc--CeEEEEEEeecCCCCCCCCCCeEEEEeCCCccCCCCCEE-EEEecC-CccccCCCcEEEEEE
Q 017499 214 ----LPNKVR----KV--GRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMY-LFCCSY-SHNVAPKGKFIAFVS 281 (370)
Q Consensus 214 ----~p~~~~----~~--~~v~R~i~I~~~pi~~~~~~~s~~ii~P~~~~~~~~~v~-v~~~~~-~~~~cP~G~~i~~~s 281 (370)
+|...+ .. ..+.-..+.++.+.+. +-.+...+.+|..+. +++ +...++ +...+|+|+.++++.
T Consensus 278 ~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~-~~~~~~~i~vp~~~~----~~~ri~~~s~~~p~~ap~g~~~l~~e 352 (484)
T 4dsg_A 278 TGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPP-HLKTACWLYFPEDTS----PFYRATVFSNYSKYNVPEGHWSLMLE 352 (484)
T ss_dssp SSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCG-GGTTCCEEECCSTTC----SCSEEECGGGTCGGGSCTTEEEEEEE
T ss_pred cCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcc-cCCCCeEEEEEcCCC----eEEEEEeecCCCcccCCCCeEEEEEE
Confidence 111111 11 1233333345555321 002345677886553 222 333333 346689998887665
Q ss_pred eecC---CCCcccccHhHHh-c--cCCcc---c---eeeeeee----ccccCCC---------CCCCcEEEcCCC---CC
Q 017499 282 TEAE---TDHPQTELKPGID-L--LGPVD---E---IFYDIYD----RYEPVNE---------PSLDNCFISTSY---DA 333 (370)
Q Consensus 282 t~~~---~~~~~~~l~~~~~-l--l~~~~---~---~~~~~~~----~~~~~~~---------~~~~~v~~~~~~---d~ 333 (370)
.... ..+.++.++.+++ | ++-+. . .++.-.. +|.+... ....||+++=-+ --
T Consensus 353 ~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~~l~~~Gr~g~~~y 432 (484)
T 4dsg_A 353 VSESKYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSRCIYSRGRFGAWRY 432 (484)
T ss_dssp EEEBTTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTEEECSTTTTCCG
T ss_pred EecCcCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhCCcEeecCCccccc
Confidence 5322 1234444555555 2 22121 1 1222112 2322100 001288887432 22
Q ss_pred C-cchHHHHHHHHHHHHhhc
Q 017499 334 T-THFESTVTDVLNMYTMIT 352 (370)
Q Consensus 334 ~-~~fe~~~~~v~~i~~~i~ 352 (370)
. ..-|.++..++++.++|.
T Consensus 433 ~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 433 EVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp GGCSHHHHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHHHHH
Confidence 1 145889999999999998
No 29
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=90.39 E-value=0.64 Score=44.32 Aligned_cols=60 Identities=27% Similarity=0.248 Sum_probs=47.9
Q ss_pred ecCCCCC---cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 152 YPLYGLG---ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 152 yp~yG~g---eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
+|..|.- ++.+++.+.+...|+.++.+++|.+|..+ ++++.+|.+++..++||.||....
T Consensus 165 ~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~~~v~~~~g~~~a~~vV~a~G 227 (405)
T 2gag_B 165 QPRAGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKD-GEKVTGVKTTRGTIHAGKVALAGA 227 (405)
T ss_dssp ETTCBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEETTCCEEEEEEEECCG
T ss_pred eCCCccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEe-CCEEEEEEeCCceEECCEEEECCc
Confidence 4555533 78899999999999999999999999875 577888887444899999986543
No 30
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=90.16 E-value=0.45 Score=47.84 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe--CCe--EEEcC-EEEEC
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCK-KVVCD 210 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~--~ge--~i~a~-~VV~~ 210 (370)
++.+++.+.+...|++++++++|.+|+.+++|+++||.. +|+ +++|+ .||..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlA 259 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLA 259 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEe
Confidence 899999999999999999999999999865789999975 454 58995 77753
No 31
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=89.63 E-value=1.2 Score=43.81 Aligned_cols=75 Identities=12% Similarity=0.005 Sum_probs=55.9
Q ss_pred HHHHHHhhhcc--cCCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 134 MKLYAESIARF--QGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 134 i~~yl~S~g~y--~G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
+..+++..|.- ......+||.-...++.+++.+.+...|+.+++++.|.+|..++ +. ..|.+++..++||.||..
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~-~~-~~V~~~~g~i~ad~VIlA 182 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA-SG-FRVTTSAGTVDAASLVVA 182 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET-TE-EEEEETTEEEEESEEEEC
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC-CE-EEEEECCcEEEeeEEEEC
Confidence 45566655541 13556677755567999999999999999999999999998753 33 567765558999999953
No 32
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=89.55 E-value=0.93 Score=42.48 Aligned_cols=54 Identities=13% Similarity=0.261 Sum_probs=42.9
Q ss_pred ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 152 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 152 yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.+..|+..+.+++++.. |+.+++|++|.+|..+ ++.+. |.+ +|+.+.||.||..
T Consensus 106 ~~~~g~~~l~~~l~~~~---g~~i~~~~~V~~i~~~-~~~~~-v~~~~g~~~~ad~vV~A 160 (342)
T 3qj4_A 106 VAPQGISSIIKHYLKES---GAEVYFRHRVTQINLR-DDKWE-VSKQTGSPEQFDLIVLT 160 (342)
T ss_dssp ECTTCTTHHHHHHHHHH---TCEEESSCCEEEEEEC-SSSEE-EEESSSCCEEESEEEEC
T ss_pred ecCCCHHHHHHHHHHhc---CCEEEeCCEEEEEEEc-CCEEE-EEECCCCEEEcCEEEEC
Confidence 56678999999887754 9999999999999875 34443 654 7888899999964
No 33
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=89.34 E-value=0.85 Score=42.53 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CC--eEEEcCEEEECCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG--ETAKCKKVVCDPS 212 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~g--e~i~a~~VV~~~~ 212 (370)
..++.+++.+.+...|+.+++++.|.+|..++++. ..|.+ +| +.++||.||....
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~a~~VV~A~G 206 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGG-FELDFGGAEPMTLSCRVLINAAG 206 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSS-EEEEECTTSCEEEEEEEEEECCG
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCce-EEEEECCCceeEEEeCEEEECCC
Confidence 35899999999999999999999999999864443 44665 56 4899999996543
No 34
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=89.26 E-value=0.72 Score=47.29 Aligned_cols=57 Identities=19% Similarity=0.283 Sum_probs=48.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
.++.+++.+.+...|+.+++++.|++|..+ ++++.+|.+ +|+.+.||.||.....-+
T Consensus 220 ~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~-~~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 220 VTMIEKMRATIIELGGEIRFSTRVDDLHME-DGQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEES-SSBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCCCh
Confidence 678889999999999999999999999875 678888986 788999999997554443
No 35
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=88.57 E-value=0.6 Score=45.56 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=44.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEc--------------CCCcEEEEEeCCeEE--EcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFD--------------EEGKVVGVTSEGETA--KCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~--------------~~~~~~gV~~~ge~i--~a~~VV~~~ 211 (370)
.++.+++.+.+...|+.++.+++|.+|..+ +++++.+|.+++..+ +||.||...
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g~i~~~Ad~VV~At 250 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDGTRVEVGEKLVVAA 250 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTSCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCCEEeecCCEEEECC
Confidence 389999999999999999999999999872 356777888743378 999988644
No 36
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=88.53 E-value=0.84 Score=46.89 Aligned_cols=53 Identities=19% Similarity=0.316 Sum_probs=45.1
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeC----------------CeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE----------------GETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~----------------ge~i~a~~VV~~ 210 (370)
+++.+.+.+.++..|+.++.++.|.++..+++|++.||.+. |..++||.||..
T Consensus 144 ~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~A 212 (584)
T 2gmh_A 144 GHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFA 212 (584)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEe
Confidence 47888999999999999999999999998766888888753 368999999964
No 37
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=88.19 E-value=0.88 Score=46.36 Aligned_cols=53 Identities=17% Similarity=0.124 Sum_probs=45.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~ge--~i~a~~VV~~ 210 (370)
.++.+++.+.+...|+.++++++|.+|..+++|++.||.. +|+ +++||.||..
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlA 312 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILA 312 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEe
Confidence 4789999999999999999999999998864488998874 576 6899998854
No 38
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=88.11 E-value=0.71 Score=43.76 Aligned_cols=53 Identities=25% Similarity=0.322 Sum_probs=44.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge~i~a~~VV~~~ 211 (370)
..+-+.+.+.++..|++++.++.|.++..+ ++++.||.+ +|+.+.||.||...
T Consensus 102 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~~~~~~a~~vV~A~ 158 (397)
T 3cgv_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAAD 158 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEECCEEEEEEEe-CCEEEEEEEEECCeEEEEEcCEEEECC
Confidence 467889999999999999999999999875 677888875 46689999999643
No 39
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=88.06 E-value=0.97 Score=48.29 Aligned_cols=61 Identities=23% Similarity=0.241 Sum_probs=49.6
Q ss_pred eecCCCC---CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 151 IYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 151 lyp~yG~---geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
.+|..|. .++.+++.+.+...|+.++.+++|.+|..+ ++++.+|.+++..++||.||....
T Consensus 141 ~~~~~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~-~~~v~~V~t~~G~i~Ad~VV~AaG 204 (830)
T 1pj5_A 141 HVPSDGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQS-GGRVTGVQTADGVIPADIVVSCAG 204 (830)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEE-TTEEEEEEETTEEEECSEEEECCG
T ss_pred EECCCceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEe-CCEEEEEEECCcEEECCEEEECCc
Confidence 3555552 379999999999999999999999999874 577888888655899999996543
No 40
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=87.98 E-value=0.93 Score=42.84 Aligned_cols=61 Identities=13% Similarity=0.078 Sum_probs=47.8
Q ss_pred eeecCCCC---CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 150 YIYPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 150 flyp~yG~---geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
+.+|..|. .++.+++.+.+...|+.++++++|.+|..+ ++++ +|.+++..++||.||....
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~-~~~~-~v~~~~g~~~a~~vV~A~G 216 (382)
T 1ryi_A 153 SFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERD-GEAL-FIKTPSGDVWANHVVVASG 216 (382)
T ss_dssp EEETTCCBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECS-SSSE-EEEETTEEEEEEEEEECCG
T ss_pred EEeCCCeEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEE-CCEE-EEEcCCceEEcCEEEECCC
Confidence 34666563 579999999999999999999999999875 4555 7777555899999886543
No 41
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=87.94 E-value=0.94 Score=45.16 Aligned_cols=52 Identities=17% Similarity=0.173 Sum_probs=44.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+...|++++.+ .|.++..++++++.+|.+ +|++++||.||..
T Consensus 173 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A 225 (511)
T 2weu_A 173 DEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDC 225 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEEC
Confidence 578899999998899999999 999998766677888886 7889999999963
No 42
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=87.49 E-value=0.83 Score=44.90 Aligned_cols=68 Identities=16% Similarity=0.158 Sum_probs=52.9
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~ 216 (370)
.+-+.|..-..++.+.+.+..+..|..+++++.|.+|..+ ++++.+|..+|+.+.||.||....+-|.
T Consensus 181 ~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 181 HERVLYKYFDKEFTDILAKDYEAHGVNLVLGSKVAAFEEV-DDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp SSSTTTTTSCHHHHHHHHHHHHHTTCEEEESSCEEEEEEE-TTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred CCchhhhhhhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcC-CCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 3333443345688899999999999999999999999753 5677777778999999999987665553
No 43
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=87.42 E-value=0.1 Score=50.41 Aligned_cols=48 Identities=17% Similarity=0.239 Sum_probs=37.0
Q ss_pred CCcee-ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 147 GSPYI-YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPfl-yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
...|. +|.+|++.|++++.+ |+.++||++|.+|. ++ | ...+|+||.+.
T Consensus 183 ~~~~~~~p~gG~~~l~~~l~~-----g~~i~l~~~V~~i~----~~---v-----~~~~D~VV~a~ 231 (367)
T 1i8t_A 183 SDRYQGIPVGGYTKLIEKMLE-----GVDVKLGIDFLKDK----DS---L-----ASKAHRIIYTG 231 (367)
T ss_dssp CCSEEECBTTCHHHHHHHHHT-----TSEEECSCCGGGSH----HH---H-----HTTEEEEEECS
T ss_pred cchhhcccCCCHHHHHHHHhc-----CCEEEeCCceeeec----hh---h-----hccCCEEEEec
Confidence 44576 999999999999887 78999999999884 11 1 13588888754
No 44
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=87.25 E-value=1.2 Score=45.24 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=45.0
Q ss_pred CcHHHHHHHHHHHh-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+... |+.++.+ .|.+|..++++.+.+|.+ +|+++.||.||..
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A 247 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDC 247 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEEC
Confidence 47899999999999 9999999 999998765677888886 7888999999964
No 45
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=86.98 E-value=1.2 Score=43.63 Aligned_cols=69 Identities=16% Similarity=0.249 Sum_probs=53.1
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEc-CCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFD-EEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~-~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.|-+.|.....++.+.+.+..+..|..+++++.|.+|.-+ +++++.+|.. +|+.+.||.||....+-|.
T Consensus 181 ~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 181 AARVLERVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp SSSTTTTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCccccchhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 3333443334578889999999999999999999998752 3567778875 7899999999987766653
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=86.92 E-value=0.9 Score=46.26 Aligned_cols=53 Identities=21% Similarity=0.216 Sum_probs=44.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~ge--~i~a~~VV~~ 210 (370)
.++.+++.+.+...|+.++++++|.+|..++++++.||.. +|+ .++||.||..
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlA 307 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLA 307 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEe
Confidence 4788999999999999999999999998863389998874 676 6899988853
No 47
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=86.03 E-value=1.1 Score=46.57 Aligned_cols=59 Identities=17% Similarity=0.081 Sum_probs=46.9
Q ss_pred eecCCC---CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 151 IYPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 151 lyp~yG---~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.+|..| ..++.+++.+.++..|++++++++|.+|..+ +++ ++|.+ +|+++.||.||...
T Consensus 407 ~~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~i~Ad~VVlAt 469 (676)
T 3ps9_A 407 TYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRK-DDC-WLLNFAGDQQATHSVVVLAN 469 (676)
T ss_dssp EETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECC
T ss_pred EecCCeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEe-CCe-EEEEECCCCEEECCEEEECC
Confidence 355555 2578999999999999999999999999886 444 47776 77889999998643
No 48
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=85.72 E-value=1.6 Score=41.25 Aligned_cols=53 Identities=9% Similarity=0.186 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPS 212 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~ 212 (370)
.++.+++.+.+...|+.++.+++|.+|..+ ++. ..|.+++..++||.||....
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~~a~~vV~A~G 202 (389)
T 2gf3_A 150 ENCIRAYRELAEARGAKVLTHTRVEDFDIS-PDS-VKIETANGSYTADKLIVSMG 202 (389)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSC-EEEEETTEEEEEEEEEECCG
T ss_pred HHHHHHHHHHHHHCCCEEEcCcEEEEEEec-CCe-EEEEeCCCEEEeCEEEEecC
Confidence 588999999999999999999999999875 333 44666666899999996543
No 49
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=85.59 E-value=0.96 Score=46.21 Aligned_cols=63 Identities=27% Similarity=0.296 Sum_probs=49.6
Q ss_pred ceeecCCC--CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C---C--eEEEcCEEEECCC
Q 017499 149 PYIYPLYG--LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E---G--ETAKCKKVVCDPS 212 (370)
Q Consensus 149 Pflyp~yG--~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~---g--e~i~a~~VV~~~~ 212 (370)
.+.|+-+- ...+.+++.+.++..|++++.+++|.+|..+ +++++||.+ + | ..++||.||....
T Consensus 159 g~~~~dg~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~-~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG 229 (561)
T 3da1_A 159 GGIYVEYRTDDARLTLEIMKEAVARGAVALNYMKVESFIYD-QGKVVGVVAKDRLTDTTHTIYAKKVVNAAG 229 (561)
T ss_dssp EEEEEEEECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEECCG
T ss_pred EEEecCceEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEc-CCeEEEEEEEEcCCCceEEEECCEEEECCC
Confidence 44555433 3589999999999999999999999999885 678888875 2 3 4789999996543
No 50
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=85.48 E-value=1.6 Score=41.02 Aligned_cols=52 Identities=15% Similarity=0.233 Sum_probs=41.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
.++.+++.+.+...|+.++.+++|.+|..+ ++. ..|.+++..++||.||...
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~-~~~-~~v~~~~g~~~a~~vV~a~ 200 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHD-DDG-VTIETADGEYQAKKAIVCA 200 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEC-SSS-EEEEESSCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEc-CCE-EEEEECCCeEEcCEEEEcC
Confidence 378999999999999999999999999875 344 4566644459999988543
No 51
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=85.43 E-value=1.4 Score=44.99 Aligned_cols=54 Identities=24% Similarity=0.223 Sum_probs=44.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~ge--~i~a~~VV~~~ 211 (370)
.++.+++.+.+...|+.++++++|.+|+.++++++.||.. +|+ +++||.||...
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAt 313 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAA 313 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECC
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeC
Confidence 3788999999999999999999999998763388999874 565 68999988643
No 52
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=85.33 E-value=1.4 Score=42.02 Aligned_cols=58 Identities=24% Similarity=0.168 Sum_probs=44.2
Q ss_pred ecCCCC---CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 152 YPLYGL---GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 152 yp~yG~---geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
.|..|. ..+.+++.+.+...|+.++.+++|.+|..+ ++.+ .|.+++..++||.||...
T Consensus 144 ~~~~g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~-~~~v-~v~t~~g~i~a~~VV~A~ 204 (397)
T 2oln_A 144 QPDGGTIDVRGTLAALFTLAQAAGATLRAGETVTELVPD-ADGV-SVTTDRGTYRAGKVVLAC 204 (397)
T ss_dssp ETTCEEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEE-TTEE-EEEESSCEEEEEEEEECC
T ss_pred cCCCCEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEc-CCeE-EEEECCCEEEcCEEEEcC
Confidence 454442 468899999999999999999999999875 3443 366665689999988644
No 53
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=84.89 E-value=0.69 Score=46.31 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=40.8
Q ss_pred eecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 151 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 151 lyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.|+.+ ++.|++++++... ++.++||++|.+|..+ ++..+.|.+ +|+.+.||+||+..
T Consensus 196 ~~~~g-~~~l~~~l~~~l~--~~~i~~~~~V~~I~~~-~~~~v~v~~~~g~~~~ad~VI~t~ 253 (516)
T 1rsg_A 196 AFALN-YDSVVQRIAQSFP--QNWLKLSCEVKSITRE-PSKNVTVNCEDGTVYNADYVIITV 253 (516)
T ss_dssp EEESC-HHHHHHHHHTTSC--GGGEETTCCEEEEEEC-TTSCEEEEETTSCEEEEEEEEECC
T ss_pred hhhhC-HHHHHHHHHHhCC--CCEEEECCEEEEEEEc-CCCeEEEEECCCcEEECCEEEECC
Confidence 35554 7777777755432 3689999999999874 233356765 78899999999864
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=84.76 E-value=1.1 Score=42.93 Aligned_cols=54 Identities=13% Similarity=0.196 Sum_probs=43.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCe--EEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE--TAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge--~i~a~~VV~~~ 211 (370)
..+.+.+.+.++..|++++.++.|.++..++++....|.+ +|+ +++||.||...
T Consensus 106 ~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~ 162 (421)
T 3nix_A 106 GNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDAS 162 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 4788999999999999999999999998765555556664 677 69999999643
No 55
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=84.37 E-value=1.5 Score=45.80 Aligned_cols=58 Identities=17% Similarity=0.205 Sum_probs=45.2
Q ss_pred ecCCC---CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCe-EEEcCEEEECC
Q 017499 152 YPLYG---LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-TAKCKKVVCDP 211 (370)
Q Consensus 152 yp~yG---~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge-~i~a~~VV~~~ 211 (370)
+|..| ..++.+++.+.+...|+.++++++|.+|..+ +++ ++|.+ +|+ .+.||.||...
T Consensus 403 ~p~~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~-~~~-v~V~t~~G~~~i~Ad~VVlAt 465 (689)
T 3pvc_A 403 YPAGGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRI-DSQ-WQLTFGQSQAAKHHATVILAT 465 (689)
T ss_dssp ETTCEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEC-SSS-EEEEEC-CCCCEEESEEEECC
T ss_pred ecCCeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEe-CCe-EEEEeCCCcEEEECCEEEECC
Confidence 45555 2588999999999999999999999999986 444 46765 666 89999988543
No 56
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=83.94 E-value=1.9 Score=42.35 Aligned_cols=52 Identities=23% Similarity=0.111 Sum_probs=43.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~ 210 (370)
.++-+.+.+.++..|+.+++++.|.++..+ ++++.||.. +|+ .++||.||..
T Consensus 100 ~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~-~~~v~gv~~~~~~~G~~~~~~ad~VV~A 157 (453)
T 3atr_A 100 PLYNQRVLKEAQDRGVEIWDLTTAMKPIFE-DGYVKGAVLFNRRTNEELTVYSKVVVEA 157 (453)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCcEEEEEEEE-CCEEEEEEEEEcCCCceEEEEcCEEEEC
Confidence 368889999988899999999999999875 577877763 676 7999999963
No 57
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=83.92 E-value=1.3 Score=42.93 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=48.0
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
..++.+.+.+..+..|..+++++.|++|.- ++++.+|.. +|+.+.||.||....+.|.
T Consensus 184 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 184 GRRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 357788888999999999999999999874 346667875 8999999999987766654
No 58
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=83.50 E-value=1.9 Score=43.36 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=44.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+...|++++.+ .|.++..++++.+.+|.+ +|+++.||.||..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A 217 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDC 217 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEEC
Confidence 688899999999999999999 899998765677778876 6888999999963
No 59
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=83.41 E-value=1.4 Score=45.06 Aligned_cols=61 Identities=18% Similarity=0.197 Sum_probs=47.3
Q ss_pred eeecCCC--CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECC
Q 017499 150 YIYPLYG--LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDP 211 (370)
Q Consensus 150 flyp~yG--~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~ 211 (370)
+.|+.+. ...+.+++.+.++..|++++.+++|.++..+ ++++++|.. +|+ .++||.||...
T Consensus 178 ~~~~dg~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~-~~~v~gV~~~d~~tg~~~~i~A~~VV~Aa 246 (571)
T 2rgh_A 178 GVYLDFRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYE-GDQIVGVKARDLLTDEVIEIKAKLVINTS 246 (571)
T ss_dssp EEECCEECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEBSCEEECC
T ss_pred EEecCCeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEe-CCEEEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 4455433 3468899999999999999999999999875 568888873 343 79999998644
No 60
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=83.14 E-value=2.4 Score=41.80 Aligned_cols=69 Identities=19% Similarity=0.162 Sum_probs=52.8
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~ 216 (370)
..+-+.|.....++.+.+.+..+..|..+++++.|.+|..+ ++++.-+..+|+.+.||.||....+-|.
T Consensus 191 ~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 191 LADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGE-NGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp SSSSSSTTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEES-SSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred ccCcccccccCHHHHHHHHHHHHhcCCEEEeCCEEEEEEcc-CCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 44555553445688999999999999999999999999763 5666533358999999999987666553
No 61
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=82.75 E-value=2.8 Score=41.04 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=50.8
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~ 216 (370)
.|-+.|.+-..++.+.+.+..+..|..+++++.|++|..+ ++++ .|..++..+.||.||....+-|.
T Consensus 179 ~~~~l~~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~~v-~v~~~~g~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 179 LENLLPKYFDKEMVAEVQKSLEKQAVIFHFEETVLGIEET-ANGI-VLETSEQEISCDSGIFALNLHPQ 245 (452)
T ss_dssp SSSSSTTTCCHHHHHHHHHHHHTTTEEEEETCCEEEEEEC-SSCE-EEEESSCEEEESEEEECSCCBCC
T ss_pred cCccccccCCHHHHHHHHHHHHHcCCEEEeCCEEEEEEcc-CCeE-EEEECCCEEEeCEEEECcCCCCC
Confidence 3444443334688899999999999999999999999864 5566 67765558999999987666653
No 62
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=82.22 E-value=1.4 Score=45.88 Aligned_cols=54 Identities=26% Similarity=0.381 Sum_probs=42.0
Q ss_pred eeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C------CeEEEcCEEEEC
Q 017499 150 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E------GETAKCKKVVCD 210 (370)
Q Consensus 150 flyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~------ge~i~a~~VV~~ 210 (370)
+....+|++.|++++++ |..++||++|.+|..+.++ ..|.+ + |+++.||+||+.
T Consensus 393 ~~~~~gG~~~l~~~La~-----~l~I~l~~~V~~I~~~~~~--v~V~~~~~~~~~~~~~~~Ad~VI~t 453 (662)
T 2z3y_A 393 HLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTASG--CEVIAVNTRSTSQTFIYKCDAVLCT 453 (662)
T ss_dssp CEEETTCTTHHHHHHTT-----TCEEETTEEEEEEEEETTE--EEEEEEESSCTTCEEEEEESEEEEC
T ss_pred eeeecCcHHHHHHHHHh-----cCceecCCeEEEEEECCCc--EEEEEeecccCCCCeEEEeCEEEEC
Confidence 45667899999999876 5589999999999986443 33443 3 678999999985
No 63
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=81.66 E-value=2 Score=44.21 Aligned_cols=52 Identities=21% Similarity=0.199 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
.++.+++.+.+...|+.+++++.|.++..++++++.||.. +|+ .++||.||.
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 200 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVL 200 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEE
Confidence 4788999999999999999999999999854688999873 465 589998884
No 64
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=80.51 E-value=3.4 Score=41.39 Aligned_cols=52 Identities=8% Similarity=0.110 Sum_probs=43.1
Q ss_pred CcHHHHHHHHHHH-hCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
..+.+.+.+.+.. .|++++.+ .|.+|..++++.+.+|.+ +|+.+.||.||..
T Consensus 175 ~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A 228 (526)
T 2pyx_A 175 AKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDC 228 (526)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEEC
Confidence 4788888888888 89999999 599998765677778875 6778999999963
No 65
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=80.43 E-value=2.9 Score=41.99 Aligned_cols=59 Identities=19% Similarity=0.155 Sum_probs=47.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcE--EEEEe-CCe-EEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKV--VGVTS-EGE-TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~--~gV~~-~ge-~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+..|+.+++++.|.+|.-++++++ ..|.. +|+ .+.||.||....+-|.
T Consensus 255 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~ 317 (523)
T 1mo9_A 255 NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPR 317 (523)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEEC
T ss_pred HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccC
Confidence 47888899999999999999999999986545655 34555 677 8999999987766654
No 66
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=79.84 E-value=5.3 Score=38.71 Aligned_cols=63 Identities=13% Similarity=0.201 Sum_probs=48.3
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcC---CCcEEEEEeCCeEEEcCEEEECC
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDE---EGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~---~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
...+||.--..++.+++.+.+...|+.+++++.|.+|..++ +++ ..|.+++..++||.||...
T Consensus 99 ~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~-~~v~~~~g~i~ad~VVlAt 164 (401)
T 2gqf_A 99 LGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVR-FVLQVNSTQWQCKNLIVAT 164 (401)
T ss_dssp TTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCC-EEEEETTEEEEESEEEECC
T ss_pred CCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe-EEEEECCCEEECCEEEECC
Confidence 34557754456899999999999999999999999998652 233 4676655589999998643
No 67
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=79.60 E-value=1.7 Score=47.00 Aligned_cols=55 Identities=25% Similarity=0.376 Sum_probs=42.5
Q ss_pred ceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C------CeEEEcCEEEEC
Q 017499 149 PYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E------GETAKCKKVVCD 210 (370)
Q Consensus 149 Pflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~------ge~i~a~~VV~~ 210 (370)
.+....+|++.|++++++ +..++||++|.+|..+.++ + .|.+ + |+++.||+||+.
T Consensus 563 ~~~~~~gG~~~L~~aLa~-----~l~I~Lnt~V~~I~~~~~g-V-~V~~~~~~~~~~g~~i~AD~VIvT 624 (852)
T 2xag_A 563 SHLTVRNGYSCVPVALAE-----GLDIKLNTAVRQVRYTASG-C-EVIAVNTRSTSQTFIYKCDAVLCT 624 (852)
T ss_dssp CCEEETTCTTHHHHHHTT-----TCCEECSEEEEEEEEETTE-E-EEEEEESSSTTCEEEEEESEEEEC
T ss_pred ceEEecCcHHHHHHHHHh-----CCCEEeCCeEEEEEEcCCc-E-EEEEeecccCCCCeEEECCEEEEC
Confidence 456778899999999876 3469999999999986433 2 3443 3 678999999985
No 68
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=79.31 E-value=2.7 Score=41.89 Aligned_cols=52 Identities=15% Similarity=0.168 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~ 211 (370)
..+.+++.+.++..|+.++.++.|.++..+ +++++|.+ +|+ .++||.||...
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~--~~~~~V~~~d~~~G~~~~i~A~~VV~At 206 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARRE--NGLWIVEAEDIDTGKKYSWQARGLVNAT 206 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTTCCEEEEEESCEEECC
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEe--CCEEEEEEEECCCCCEEEEECCEEEECC
Confidence 478999999999999999999999999875 36778875 575 78999999644
No 69
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=78.45 E-value=3.2 Score=36.76 Aligned_cols=54 Identities=20% Similarity=0.171 Sum_probs=41.1
Q ss_pred CcHHHHHHHHHHHh-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCC
Q 017499 158 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSY 213 (370)
Q Consensus 158 geI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y 213 (370)
.++.+.+.+.++.. |..++ ++.|.+|..+ ++++.+|.+ +|+.++||.||...-.
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~-~~~v~~v~~~~g~~i~a~~VV~A~G~ 123 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLE-GNRVVGVRTWEGPPARGEKVVLAVGS 123 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEE-TTEEEEEEETTSCCEECSEEEECCTT
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEe-CCEEEEEEECCCCEEECCEEEECCCC
Confidence 36777787877776 66666 7899999875 567778876 7889999999965443
No 70
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=78.27 E-value=3.5 Score=41.19 Aligned_cols=52 Identities=23% Similarity=0.226 Sum_probs=43.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~ge--~i~a~~VV~~ 210 (370)
..+.+.+.+.+...|++++.++.|.+|..+ ++++.+|.. +|+ +++||.||..
T Consensus 111 ~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~-~~~v~gv~~~~~dG~~~~i~ad~VI~A 167 (512)
T 3e1t_A 111 ARFDDMLLRNSERKGVDVRERHEVIDVLFE-GERAVGVRYRNTEGVELMAHARFIVDA 167 (512)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCEEEEEEEE-TTEEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEE-CCEEEEEEEEeCCCCEEEEEcCEEEEC
Confidence 478889999998899999999999999875 677877763 474 8999999953
No 71
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=77.99 E-value=3 Score=44.51 Aligned_cols=54 Identities=20% Similarity=0.284 Sum_probs=41.4
Q ss_pred eecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 151 IYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 151 lyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.+...|+..|.+++.+ |..+++|++|++|..+ ++.+. |.+ +|+++.||+||+..
T Consensus 527 ~~~~~G~~~l~~aLa~-----gl~I~l~t~V~~I~~~-~~~v~-V~~~~G~~i~Ad~VIvA~ 581 (776)
T 4gut_A 527 TLLTPGYSVIIEKLAE-----GLDIQLKSPVQCIDYS-GDEVQ-VTTTDGTGYSAQKVLVTV 581 (776)
T ss_dssp EECTTCTHHHHHHHHT-----TSCEESSCCEEEEECS-SSSEE-EEETTCCEEEESEEEECC
T ss_pred EEECChHHHHHHHHHh-----CCcEEcCCeeEEEEEc-CCEEE-EEECCCcEEEcCEEEECC
Confidence 3446778888888764 7789999999999875 34444 554 78899999999753
No 72
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=77.45 E-value=3.8 Score=40.53 Aligned_cols=68 Identities=7% Similarity=0.007 Sum_probs=48.8
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CC-eEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG-ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~g-e~i~a~~VV~~~~y~p 215 (370)
..|-+.|... .++.+.+.+..+..|..+++++.|.+|.-+++++...|.. +| +.+.||.||....+-|
T Consensus 216 ~~~~~l~~~d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p 285 (479)
T 2hqm_A 216 RGETVLRKFD-ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKS 285 (479)
T ss_dssp SSSSSCTTSC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEE
T ss_pred eCCccccccC-HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCC
Confidence 3444444322 4788888888899999999999999997643443455664 78 7899999998655544
No 73
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=77.37 E-value=1.6 Score=42.21 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=38.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccc---------eEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPEC---------KVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~---------~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
..+.+++.+.+...|+.++.+++|. +|..+ ++++ +|.+++..++||.||...
T Consensus 172 ~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~-~~~v-~v~~~~g~i~a~~VV~A~ 232 (405)
T 3c4n_A 172 GSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVT-NTHQ-IVVHETRQIRAGVIIVAA 232 (405)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC---------CBCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEee-CCeE-EEEECCcEEECCEEEECC
Confidence 4699999999999999999999998 88654 4555 777755589999988644
No 74
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=77.16 E-value=0.85 Score=48.34 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=44.7
Q ss_pred eeecCCCCCcHHHHHHHHHHHhCcEEEcCCccc--eEEEcCCC-----cEEEE-Ee-CCe--EEEcCEEEE
Q 017499 150 YIYPLYGLGELPQAFARLSAVYGGTYMLNKPEC--KVEFDEEG-----KVVGV-TS-EGE--TAKCKKVVC 209 (370)
Q Consensus 150 flyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~--~I~~~~~~-----~~~gV-~~-~ge--~i~a~~VV~ 209 (370)
+-++.+|+..|+++|.+... .|+...||++|+ +|..+.++ ..+.| .. +|+ ++.||+||+
T Consensus 339 ~~~i~GG~~~L~~aLa~~l~-~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIv 408 (721)
T 3ayj_A 339 YTLPVTENVEFIRNLFLKAQ-NVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVIL 408 (721)
T ss_dssp ECCSSSSTHHHHHHHHHHHH-HHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEE
T ss_pred eeEECCcHHHHHHHHHHhcc-cCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEE
Confidence 55788999999999998653 377789999999 99865333 13445 23 677 789999998
No 75
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=76.49 E-value=3.4 Score=39.36 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=42.2
Q ss_pred CcHHHHHHHHHHHh-CcEEEcCCccceEEEcCCCcEE-EEEe-CCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVV-GVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~~~~~~-gV~~-~ge~i~a~~VV~~~ 211 (370)
.++.+.+.+.+... |+.+++++.|.++..++ +.++ .|.. +|++++||.||...
T Consensus 107 ~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~-~~v~g~v~~~~g~~~~ad~vV~Ad 162 (399)
T 2x3n_A 107 ESLRRLVLEKIDGEATVEMLFETRIEAVQRDE-RHAIDQVRLNDGRVLRPRVVVGAD 162 (399)
T ss_dssp HHHHHHHHHHHTTCTTEEEECSCCEEEEEECT-TSCEEEEEETTSCEEEEEEEEECC
T ss_pred HHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC-CceEEEEEECCCCEEECCEEEECC
Confidence 47888898888888 99999999999998753 4443 5654 78899999999643
No 76
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=76.20 E-value=2.2 Score=41.79 Aligned_cols=169 Identities=13% Similarity=0.142 Sum_probs=83.4
Q ss_pred CCcee-ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECC--C-CCCccccccC
Q 017499 147 GSPYI-YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDP--S-YLPNKVRKVG 222 (370)
Q Consensus 147 ~sPfl-yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~--~-y~p~~~~~~~ 222 (370)
+..|. ||.+|.+.|.+++ ++..|+..+||++|.++ ++.+.+|.||... + ++.-...+..
T Consensus 211 ~~~~qg~P~gGy~~l~e~l---~~~~g~~V~l~~~v~~~--------------~~~~~~d~vI~T~P~d~~~~~~~g~L~ 273 (397)
T 3hdq_A 211 ADTYQAMPLHGYTRMFQNM---LSSPNIKVMLNTDYREI--------------ADFIPFQHMIYTGPVDAFFDFCYGKLP 273 (397)
T ss_dssp CCSEEEEETTCHHHHHHHH---TCSTTEEEEESCCGGGT--------------TTTSCEEEEEECSCHHHHTTTTTCCCC
T ss_pred hhhheeccCCCHHHHHHHH---HhccCCEEEECCeEEec--------------cccccCCEEEEcCCHHHHHHHhcCCCC
Confidence 45665 7999988886665 45679999999999743 2334577777653 1 1110111111
Q ss_pred -eEEEEEEe-ecCCCCCCCCCCeEEEEeCCCccCCCCCE-EEEEecCCccccCCCcEEEEEEeecCCCCcccccHhHHhc
Q 017499 223 -RVARAIAI-MSHPIPNTNDSHSVQVILPQKQLGRRSDM-YLFCCSYSHNVAPKGKFIAFVSTEAETDHPQTELKPGIDL 299 (370)
Q Consensus 223 -~v~R~i~I-~~~pi~~~~~~~s~~ii~P~~~~~~~~~v-~v~~~~~~~~~cP~G~~i~~~st~~~~~~~~~~l~~~~~l 299 (370)
+-.|.+.+ ++.+ + -...++|.+|..+ +. .|.+++.-++. |.++.++..=...+..+|.
T Consensus 274 yrsl~~~~~~~~~~--~--~~~~~~vn~~d~~-----p~tRi~e~k~~~~~-~~~~t~i~~Ey~~~~~~py--------- 334 (397)
T 3hdq_A 274 YRSLEFRHETHDTE--Q--LLPTGTVNYPNDY-----AYTRVSEFKHITGQ-RHHQTSVVYEYPRAEGDPY--------- 334 (397)
T ss_dssp EEEEEEEEEEESSS--C--SCSSSEEECSSSS-----SCSEEEEHHHHHCC-CCSSEEEEEEEEESSSSCC---------
T ss_pred CceEEEEEEEeccc--c--CCCCeEEEeCCCC-----cceEEEeecccCCC-CCCCEEEEEEECCCCCccc---------
Confidence 34444433 3322 1 1234678888432 22 35555543344 4455555432222221110
Q ss_pred cCCcc-ceeeeeeeccccCCCCCCCcEEEc---CCCCCCcchHHHHHHHHHHHHhhcCC
Q 017499 300 LGPVD-EIFYDIYDRYEPVNEPSLDNCFIS---TSYDATTHFESTVTDVLNMYTMITGK 354 (370)
Q Consensus 300 l~~~~-~~~~~~~~~~~~~~~~~~~~v~~~---~~~d~~~~fe~~~~~v~~i~~~i~g~ 354 (370)
-|+- +.-......|.... ...+||+.. -.|-- .+.|.++.+++++++++...
T Consensus 335 -Ypv~~~~~~~~~~~y~~~a-~~~~~v~~~GRlg~y~Y-~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 335 -YPVPRPENAELYKKYEALA-DAAQDVTFVGRLATYRY-YNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp -EECCSHHHHHHHHHHHHHH-HHCTTEEECSTTTTTCC-CCHHHHHHHHHHHHHHHHC-
T ss_pred -cccCchhHHHHHHHHHHHH-hcCCCEEEcccceEEEe-ccHHHHHHHHHHHHHHHhcc
Confidence 0110 00000001122111 013577764 12222 25589999999999998653
No 77
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=75.61 E-value=4.6 Score=40.18 Aligned_cols=57 Identities=19% Similarity=0.202 Sum_probs=45.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|..++++. ..|.. +|+.+.||.||....+-|
T Consensus 231 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p 288 (490)
T 1fec_A 231 SELRKQLTEQLRANGINVRTHENPAKVTKNADGT-RHVVFESGAEADYDVVMLAIGRVP 288 (490)
T ss_dssp HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCE-EEEEECCCcEEEcCEEEEccCCCc
Confidence 4788889999999999999999999998653333 45554 788999999998665544
No 78
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=75.59 E-value=4.4 Score=39.76 Aligned_cols=57 Identities=16% Similarity=0.156 Sum_probs=45.4
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-e-CCeEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~-~ge~i~a~~VV~~~~y~p 215 (370)
..++.+.+.+..+..|..+++++.|.+|..++++. ..|. . +|+ +.||.||...-+.|
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGR-RVATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSC-EEEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCE-EEEEEcCCCe-EEeCEEEEeeCccc
Confidence 35788999999999999999999999998754443 4666 5 677 99999998665544
No 79
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=75.44 E-value=4.8 Score=40.13 Aligned_cols=68 Identities=19% Similarity=0.259 Sum_probs=49.5
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
..|-+.|... .++.+.+.+..+..|..+++++.|.+|.-++++. ..|.. +|+.+.||.||....+-|.
T Consensus 225 ~~~~~l~~~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~-~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 225 RNNLILRGFD-ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGS-KHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp SSSSSCTTSC-HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred cCCccccccC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCce-EEEEECCCcEEEcCEEEECCCCccc
Confidence 3344444322 3788888899999999999999999997643333 45654 7889999999987665553
No 80
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=74.76 E-value=5.1 Score=39.64 Aligned_cols=56 Identities=18% Similarity=0.199 Sum_probs=45.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|..+ ++++ .|.. +|+.+.||.||....+-|
T Consensus 232 ~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vi~A~G~~p 288 (484)
T 3o0h_A 232 YDLRQLLNDAMVAKGISIIYEATVSQVQST-ENCY-NVVLTNGQTICADRVMLATGRVP 288 (484)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEee-CCEE-EEEECCCcEEEcCEEEEeeCCCc
Confidence 478889999999999999999999999864 4444 5654 788999999998665544
No 81
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=74.60 E-value=4.1 Score=40.77 Aligned_cols=57 Identities=14% Similarity=0.211 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCC-cEEEEEe---CC-----eEEEcCEEEECCCCC
Q 017499 158 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEG-KVVGVTS---EG-----ETAKCKKVVCDPSYL 214 (370)
Q Consensus 158 geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~-~~~gV~~---~g-----e~i~a~~VV~~~~y~ 214 (370)
....+++-+.+...| .++++++.|++|++++++ +++||+. +| .+++|+.||..+.-+
T Consensus 221 ~s~~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~ 287 (504)
T 1n4w_A 221 QSLDKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSL 287 (504)
T ss_dssp CCTTTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHH
T ss_pred cCHHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCC
Confidence 345667777766676 899999999999997544 8999985 56 368899999876554
No 82
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=74.44 E-value=8.5 Score=37.27 Aligned_cols=89 Identities=12% Similarity=0.178 Sum_probs=57.4
Q ss_pred chhhHHHHHH-HcCCChhHHHHHHHhhhcccCCCcCCcchHHHHHHHHHHHHhhhcccCCCceeecCCCCCcHHHHHHHH
Q 017499 89 TRVTTRELIA-KYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARL 167 (370)
Q Consensus 89 ~~~~~~~~~~-~~~L~~~l~~~i~~alal~~~~~~~~~~~~~~l~ri~~yl~S~g~y~G~sPflyp~yG~geI~Qaf~Rl 167 (370)
...|+.++++ +.++++..++.+...... ....+....+++ .. . .-+.+...+.-..+|+..||++|.+.
T Consensus 260 D~~S~~~~L~~~~g~s~~~~~~~~~~~~~---~~~~~~s~l~~l---~~---~-~~~~~~~~~~~i~GG~~~l~~~l~~~ 329 (376)
T 2e1m_A 260 DGYSMGRFLREYAEFSDEAVEAIGTIENM---TSRLHLAFFHSF---LG---R-SDIDPRATYWEIEGGSRMLPETLAKD 329 (376)
T ss_dssp TTCBHHHHHHHTSCCCHHHHHHHHHHTTC---TTTTTSBHHHHH---HH---C-SCSCTTCCEEEETTCTTHHHHHHHHH
T ss_pred hCCCHHHHHhhccCCCHHHHHHHHhhcCc---cccchhhHHHHH---HH---h-hhhccCCceEEECCcHHHHHHHHHHh
Confidence 4568889987 789999888876222211 111122233332 11 1 12313455667789999999999876
Q ss_pred HHHhCcEEEcCCccceEEEcCCC
Q 017499 168 SAVYGGTYMLNKPECKVEFDEEG 190 (370)
Q Consensus 168 aAv~Gg~y~L~~~V~~I~~~~~~ 190 (370)
. +...+||++|.+|..+++|
T Consensus 330 l---~~~i~l~~~V~~I~~~~~g 349 (376)
T 2e1m_A 330 L---RDQIVMGQRMVRLEYYDPG 349 (376)
T ss_dssp G---GGTEECSEEEEEEEECCCC
T ss_pred c---CCcEEecCeEEEEEECCCc
Confidence 4 6789999999999876444
No 83
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=74.07 E-value=4.3 Score=40.65 Aligned_cols=57 Identities=16% Similarity=0.140 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCC-cEEEEEe---CC-----eEEEcCEEEECCCCC
Q 017499 158 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEG-KVVGVTS---EG-----ETAKCKKVVCDPSYL 214 (370)
Q Consensus 158 geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~-~~~gV~~---~g-----e~i~a~~VV~~~~y~ 214 (370)
....+++-+.+...| .++++++.|++|++++++ +++||+. +| .+++|+.||..+.-+
T Consensus 226 ~s~~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~ 292 (507)
T 1coy_A 226 KSLDKTYLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSV 292 (507)
T ss_dssp CCTTTTHHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHH
T ss_pred cChHHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCcc
Confidence 355677777777776 899999999999997545 7999985 56 368899999766544
No 84
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=73.52 E-value=6.8 Score=38.69 Aligned_cols=56 Identities=14% Similarity=0.115 Sum_probs=46.6
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|.- ++++.+|.++++.+.||.||....+.|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 227 GDMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEEETTEEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEEECCCEEEcCEEEECcCCCc
Confidence 47888899999999999999999999875 356777877888999999998766554
No 85
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=72.98 E-value=6 Score=39.26 Aligned_cols=66 Identities=17% Similarity=0.129 Sum_probs=47.8
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
..|-+.|.. -.++.+.+.+..+..|..+++++.|.+|..+ ++++ .|.. +|+.+.||.||.....-|
T Consensus 213 ~~~~~l~~~-d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 213 SQDHVLPYE-DADAALVLEESFAERGVRLFKNARAASVTRT-GAGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SSSSSSCCS-SHHHHHHHHHHHHHTTCEEETTCCEEEEEEC-SSSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred cCCcccccc-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 344444432 2378889999999999999999999999864 3444 4544 788999999997654443
No 86
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=72.90 E-value=3.7 Score=40.75 Aligned_cols=67 Identities=16% Similarity=0.136 Sum_probs=50.8
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~ 216 (370)
.|-+.|.+--.++.+.+-+..+..|..+++++.|.+|.- ++++.+|..+|+.+.||.||....+-|.
T Consensus 226 ~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 226 VDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGETVKEVAG--NGKVEKIITDKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp SSSTTTTTSCHHHHHHHHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEESSCEEECSEEEECCCEEEC
T ss_pred ccchhhhHHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEECCcEEECCEEEECCCCCcC
Confidence 333344333457888888888999999999999999874 4556667778999999999987666553
No 87
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=72.65 E-value=5.7 Score=41.43 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=43.0
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEE
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
+|.+++.+.+...|+.++.++.|.+++.+ +|++.||.. +|+ .++||.||.
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVl 214 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQ-DGKCYGAVVRDLVTGDIIAYVAKGTLI 214 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEE
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEec-CCEEEEEEEEECCCCcEEEEEcCEEEE
Confidence 78999999999999999999999999885 688999863 466 489999884
No 88
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=72.23 E-value=7.3 Score=37.29 Aligned_cols=79 Identities=14% Similarity=0.113 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHhhhc--------ccCCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCC
Q 017499 129 DTVKRMKLYAESIAR--------FQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEG 199 (370)
Q Consensus 129 ~~l~ri~~yl~S~g~--------y~G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~g 199 (370)
+....+..++...|. + -..| +.|..+ .++.+.+-+..+..|..+++++.|++|.- ++ |. .+|
T Consensus 184 e~a~~~~~~l~~~g~~~~~~v~~~-~~~~-~l~~~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i~~--~~----v~~~~g 254 (409)
T 3h8l_A 184 EMSLMLHGYFKKKGMLDKVHVTVF-SPGE-YLSDLS-PNSRKAVASIYNQLGIKLVHNFKIKEIRE--HE----IVDEKG 254 (409)
T ss_dssp HHHHHHHHHHHTTTCTTTEEEEEE-CSSS-SSTTBC-HHHHHHHHHHHHHHTCEEECSCCEEEECS--SE----EEETTS
T ss_pred HHHHHHHHHHHHcCCCCCeEEEEE-eCCc-cccccC-HHHHHHHHHHHHHCCCEEEcCCceEEECC--Ce----EEECCC
Confidence 444455667776553 2 2344 344444 57888899999999999999999988842 22 44 489
Q ss_pred eEEEcCEEEECCCCCCc
Q 017499 200 ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 200 e~i~a~~VV~~~~y~p~ 216 (370)
+.+.||.||..+.+.|.
T Consensus 255 ~~~~~D~vi~a~G~~~~ 271 (409)
T 3h8l_A 255 NTIPADITILLPPYTGN 271 (409)
T ss_dssp CEEECSEEEEECCEECC
T ss_pred CEEeeeEEEECCCCCcc
Confidence 99999999987766654
No 89
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=72.22 E-value=7.8 Score=36.03 Aligned_cols=52 Identities=25% Similarity=0.382 Sum_probs=42.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe--CCe--EEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGE--TAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~--~ge--~i~a~~VV~~ 210 (370)
.++-+.+.+.++..|+.+++++.|.++..+ ++++.++.. +|+ .++||.||..
T Consensus 102 ~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~-~~~~~~v~~~~~~~~~~~~a~~vIgA 157 (397)
T 3oz2_A 102 DKFDKHLAALAAKAGADVWVKSPALGVIKE-NGKVAGAKIRHNNEIVDVRAKMVIAA 157 (397)
T ss_dssp HHHHHHHHHHHHHHTCEEESSCCEEEEEEE-TTEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCcEEeeeeeeeeeeec-cceeeeeeecccccceEEEEeEEEeC
Confidence 467888999999999999999999998875 677777763 454 5899999964
No 90
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=72.21 E-value=6.2 Score=40.55 Aligned_cols=53 Identities=19% Similarity=0.152 Sum_probs=43.6
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe--CC--eEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EG--ETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~--~g--e~i~a~~VV~~~ 211 (370)
..+.+.+.+.+...|++++.++.|.++..+ ++.+.+|.+ +| ++++||.||...
T Consensus 128 ~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~~G~~~~i~AdlVV~Ad 184 (591)
T 3i3l_A 128 EEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRRGGESVTVESDFVIDAG 184 (591)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEETTEEEEEEESEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEecCCceEEEEcCEEEECC
Confidence 478889999999999999999999999874 566677764 67 689999999643
No 91
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=71.97 E-value=12 Score=31.07 Aligned_cols=54 Identities=20% Similarity=0.178 Sum_probs=42.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+-+.++..|..++++ .|.++..++ +. ..|.+ +| .++||.||......|
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~-~~-~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMG-GV-FEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECS-SS-EEEECSSC-EEEEEEEEECCTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC-CE-EEEEECCC-EEEECEEEECCCCCC
Confidence 478888889999999999999 999998653 33 45655 56 899999997665555
No 92
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=71.75 E-value=7.5 Score=38.10 Aligned_cols=64 Identities=9% Similarity=0.071 Sum_probs=48.7
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p 215 (370)
.|-++| -..++.+.+.+..+..|..+++++.|.+|.-+ +....|.++++.+.||.||....+.|
T Consensus 208 ~~~~l~--~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 208 NTLFFR--EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHM--DGEFVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp SCTTTT--SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEE--TTEEEEEETTEEEEESEEEECSCEEE
T ss_pred CCccCC--CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEEECCcEEEcCEEEECCCCCc
Confidence 344444 23578999999999999999999999999753 33456777788999999997655444
No 93
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=71.74 E-value=7.1 Score=36.95 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=40.7
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE--eCCe--EEEcCEEEEC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT--SEGE--TAKCKKVVCD 210 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~--~~ge--~i~a~~VV~~ 210 (370)
-.++-+.+.+.+...|+.+++++.|.++..++++.+ .|. .+|+ +++||.||..
T Consensus 102 ~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~-~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 102 QTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERP-YVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSC-EEEEEETTEEEEEECSEEEEC
T ss_pred hHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCce-EEEEecCCcEEEEEeCEEEEC
Confidence 357888898888888999999999999976433332 343 4787 7999999963
No 94
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=71.73 E-value=5.9 Score=36.17 Aligned_cols=53 Identities=11% Similarity=0.026 Sum_probs=40.4
Q ss_pred CcHHHHHHHHHHH-hCcEEEcCCccceEEEcCCCcEEEEEe----------CC-----eEEEcCEEEECC
Q 017499 158 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS----------EG-----ETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~~~~gV~~----------~g-----e~i~a~~VV~~~ 211 (370)
.++.+.+.+.+.. .|+.+++++.|.+|..+ ++++.+|.. +| +.++||.||...
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~-~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~At 187 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSC 187 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEE-TTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEec-CCeEEEEEEeccccccccCccccCceEEEECCEEEECC
Confidence 4677777766655 79999999999999875 577888864 22 678999998543
No 95
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=71.70 E-value=6.9 Score=38.30 Aligned_cols=57 Identities=11% Similarity=0.147 Sum_probs=44.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|.-++++. ..|.. +|+.+.||.||....+-|
T Consensus 208 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~i~~D~vv~a~G~~p 265 (450)
T 1ges_A 208 PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGS-LTLELEDGRSETVDCLIWAIGREP 265 (450)
T ss_dssp HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSC-EEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcE-EEEEECCCcEEEcCEEEECCCCCc
Confidence 3688888899999999999999999997643343 34554 788999999997654444
No 96
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=71.58 E-value=5.7 Score=39.54 Aligned_cols=57 Identities=19% Similarity=0.150 Sum_probs=45.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+..|..+++++.|.+|.-+ ++++ .|.. +|+.+.||.||...-+.|.
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~-~~~~-~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVS-SGKL-LIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECCCEEEC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEec-CCeE-EEEECCCCEEECCEEEECCCCCcc
Confidence 367888888999999999999999998753 3443 5664 8999999999987665553
No 97
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=71.48 E-value=7.4 Score=35.37 Aligned_cols=57 Identities=18% Similarity=0.056 Sum_probs=43.2
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C----C--eEEEcCEEEECCCCCCc
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E----G--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~----g--e~i~a~~VV~~~~y~p~ 216 (370)
++.+.+.+.....|..+++++.|.+|.-+ ++++.+|.. + | +.+.||.||....+-|.
T Consensus 185 ~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 185 ILIKRLMDKVENGNIILHTNRTLEEVTGD-QMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp HHHHHHHHHHHTSSEEEECSCEEEEEEEC-SSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred HHHHHHHHhcccCCeEEEcCceeEEEEcC-CCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 45666666667789999999999999764 457777764 3 4 57999999987666553
No 98
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=70.96 E-value=10 Score=37.70 Aligned_cols=58 Identities=5% Similarity=0.030 Sum_probs=45.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeE-EEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGET-AKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~-i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+..|..+++++.|.+|.-++++. ..|.. +|+. +.||.||....+-|.
T Consensus 217 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 217 ESVINVLENDMKKNNINIVTFADVVEIKKVSDKN-LSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTC-EEEEETTSCEEEEESEEEECCCBCCT
T ss_pred hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCce-EEEEECCCcEEEECCEEEECCCCCcC
Confidence 4788888899999999999999999997643343 34554 7887 999999987666654
No 99
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=70.52 E-value=6.7 Score=39.35 Aligned_cols=58 Identities=16% Similarity=0.138 Sum_probs=45.6
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEc------------------CCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFD------------------EEGKVVGVTSEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~------------------~~~~~~gV~~~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+-+.....|..+++++.|.+|.-+ +++++..+..+|+.+.||.||....+-|
T Consensus 192 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p 267 (565)
T 3ntd_A 192 REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRP 267 (565)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCcc
Confidence 578888888889999999999999999763 2455544445889999999998766554
No 100
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=70.50 E-value=5.1 Score=41.51 Aligned_cols=50 Identities=20% Similarity=0.331 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEE
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
+|.+++.+.+...|+.++.++.|.+++.+ +|++.||.. +|+ .++||.||.
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVl 211 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLME-NGECRGVIALCIEDGTIHRFRAKNTVI 211 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEEE-TTEEEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEEE-CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 78899999988899999999999999885 688999874 465 689999884
No 101
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=69.95 E-value=7 Score=37.18 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
..++.+.+.+..+..|..+++++.|.+|..+ ++. ..|.. +|+.+.||.||.....-|.
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~-~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKA-GEG-LEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEEC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEec-CCE-EEEEECCCCEEECCEEEECcCCCcC
Confidence 3467888999999999999999999999764 332 45554 7899999999987655553
No 102
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=69.86 E-value=4.7 Score=39.35 Aligned_cols=57 Identities=16% Similarity=0.113 Sum_probs=46.1
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p 215 (370)
-.++.+.+.+..+..|..+++++.|.+|.- ++++..|..+|+.+.||.||....+-|
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEECCCEEECCEEEECcCCCC
Confidence 357888898999999999999999999874 355556777888999999998665554
No 103
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=67.81 E-value=7.9 Score=36.09 Aligned_cols=58 Identities=17% Similarity=0.179 Sum_probs=45.8
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CC--eEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EG--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~g--e~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+..|..+++++.|.+|.-+ ++++.+|.. +| +.+.||.||....+-|.
T Consensus 202 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 202 GKTAHEVERARANGTIDVYLETEVASIEES-NGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp SHHHHSSHHHHHHTSEEEESSEEEEEEEEE-TTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred HHHHHHHHHHhhcCceEEEcCcCHHHhccC-CCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 456777777778889999999999999764 567767764 67 67999999987776664
No 104
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=67.75 E-value=14 Score=36.74 Aligned_cols=76 Identities=14% Similarity=0.049 Sum_probs=50.7
Q ss_pred HHHHHHhhhcccCCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 134 MKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 134 i~~yl~S~g~y~G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
+..+++.++...|+.-.++ |.|.+ ++.+.....|+.+++++.|.+|.- ++++.+|.. +|+.+.||.||....
T Consensus 238 ~~~~~~~~~~~~~~~vvVi---GgG~~--gle~~l~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i~aD~Vv~a~G 310 (493)
T 1y56_A 238 ALEVMNVWEVAPGRKVAVT---GSKAD--EVIQELERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEYKVDALIFADG 310 (493)
T ss_dssp HHHHHHTSCBCSCSEEEEE---STTHH--HHHHHHHHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEEECSEEEECCC
T ss_pred HHHHHHhcccCCCCEEEEE---CCCHH--HHHHHHHhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEEEeCEEEECCC
Confidence 3445554444433443333 44433 222667789999999999999874 345666765 788999999999887
Q ss_pred CCCc
Q 017499 213 YLPN 216 (370)
Q Consensus 213 y~p~ 216 (370)
+.|.
T Consensus 311 ~~p~ 314 (493)
T 1y56_A 311 RRPD 314 (493)
T ss_dssp EEEC
T ss_pred cCcC
Confidence 7764
No 105
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=67.54 E-value=8.4 Score=35.28 Aligned_cols=52 Identities=13% Similarity=0.110 Sum_probs=41.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.++.+|..+++++.|.++..+ ++++.+|.+++..+.+|.||..
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~-~~~~~~v~~~~g~~~~d~vV~A 127 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHF-GERLRVVARDGRQWLARAVISA 127 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEE-TTEEEEEETTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEC-CCcEEEEEeCCCEEEeCEEEEC
Confidence 578888888899999999999999999875 4444447765558999998853
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=64.90 E-value=9.5 Score=39.71 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=40.8
Q ss_pred cHHHHHHHHHHHh-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 159 ELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 159 eI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
++.+++-+.++.. |..+ ++..|.+|..+ ++++.||.+ +|+.+.||.||..
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e-~g~V~GV~t~dG~~i~AdaVVLA 175 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVK-NNQVVGVRTNLGVEYKTKAVVVT 175 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEES-SSBEEEEEETTSCEEECSEEEEC
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEc
Confidence 5788888888774 7777 78899999875 688999986 7889999998853
No 107
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=64.34 E-value=11 Score=36.34 Aligned_cols=63 Identities=22% Similarity=0.225 Sum_probs=47.4
Q ss_pred CceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 148 SPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 148 sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.|.+.|..-..++.+.+.+..+..|..+++++.|.+|. + + +|.. +|+.+.||.||....+-|.
T Consensus 177 ~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~-~--~---~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 177 QPRLMSRAAPATLADFVARYHAAQGVDLRFERSVTGSV-D--G---VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp SSSSSTTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE-T--T---EEEETTSCEEECSEEEECSCEEEC
T ss_pred CCcccccccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE-C--C---EEEECCCCEEEcCEEEECcCCCcc
Confidence 33334432234788888899999999999999999987 3 3 4554 7899999999987766654
No 108
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=64.20 E-value=11 Score=35.54 Aligned_cols=49 Identities=18% Similarity=0.214 Sum_probs=40.1
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
.++-+.+.+.+...|+.+++++.|.++.. ++ .|.. +|++++||.||...
T Consensus 107 ~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~~~~g~~~~ad~vV~Ad 156 (379)
T 3alj_A 107 SHLHDALVNRARALGVDISVNSEAVAADP--VG---RLTLQTGEVLEADLIVGAD 156 (379)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEEETTSCEEECSEEEECC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEEECCCCEEEcCEEEECC
Confidence 57888898888889999999999999864 34 4554 78899999999643
No 109
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=64.16 E-value=9.9 Score=37.95 Aligned_cols=54 Identities=9% Similarity=0.047 Sum_probs=41.8
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCC---cEEEEEeCC---eEEEcCEEEEC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEG---KVVGVTSEG---ETAKCKKVVCD 210 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~---~~~gV~~~g---e~i~a~~VV~~ 210 (370)
-.++-+.+.+.++..|+.++.++.|.++..++++ .+.....++ ++++||+||.-
T Consensus 119 ~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~A 178 (535)
T 3ihg_A 119 QDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGA 178 (535)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEEC
Confidence 4588899999999999999999999999876442 333222354 78999999963
No 110
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=64.16 E-value=10 Score=38.37 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=45.0
Q ss_pred CCcHHHHHHHHHHHhCc--EEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 157 LGELPQAFARLSAVYGG--TYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg--~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
..+|-+.+.+.++.+|. .+++++.|.++..++++....|.+ +|+++.||.||....
T Consensus 86 ~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG 144 (540)
T 3gwf_A 86 QPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVG 144 (540)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCc
Confidence 35788888888899987 899999999999876555666775 788999999996433
No 111
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=64.07 E-value=12 Score=34.10 Aligned_cols=52 Identities=15% Similarity=0.105 Sum_probs=37.0
Q ss_pred ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEE-cCEEEEC
Q 017499 152 YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAK-CKKVVCD 210 (370)
Q Consensus 152 yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~-a~~VV~~ 210 (370)
....|+..|.+++.+ |..++++++|.+|..+++ .+. |.+ +|+... ||.||..
T Consensus 104 ~~~~~~~~l~~~l~~-----g~~i~~~~~v~~i~~~~~-~~~-v~~~~g~~~~~a~~vV~a 157 (336)
T 1yvv_A 104 VGKPGMSAITRAMRG-----DMPVSFSCRITEVFRGEE-HWN-LLDAEGQNHGPFSHVIIA 157 (336)
T ss_dssp EESSCTHHHHHHHHT-----TCCEECSCCEEEEEECSS-CEE-EEETTSCEEEEESEEEEC
T ss_pred EcCccHHHHHHHHHc-----cCcEEecCEEEEEEEeCC-EEE-EEeCCCcCccccCEEEEc
Confidence 334467777777655 889999999999987643 333 554 677664 8998864
No 112
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=63.71 E-value=11 Score=36.91 Aligned_cols=56 Identities=18% Similarity=0.176 Sum_probs=43.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCe-EEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE-TAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge-~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|.-++++ ..|.. +|+ .+.||.||....+-|
T Consensus 207 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~v~~~~G~~~i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 207 PLLSATLAENMHAQGIETHLEFAVAALERDAQG--TTLVAQDGTRLEGFDSVIWAVGRAP 264 (463)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTE--EEEEETTCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCe--EEEEEeCCcEEEEcCEEEECCCCCc
Confidence 367888888889999999999999999764333 45654 788 899999997654443
No 113
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=63.34 E-value=12 Score=36.58 Aligned_cols=66 Identities=20% Similarity=0.062 Sum_probs=48.3
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
..|.+.| +.-.++.+.+.+..+..|..+++++.|.+|..+ ++. ..|.. +|+.+.||.||....+-|
T Consensus 198 ~~~~~l~-~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~-~~~-v~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 198 YMDRILP-TMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPE-AKG-ARVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp SSSSSCT-TSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEE-TTE-EEEEETTSCEEEESEEEECSCEEE
T ss_pred cCCcccc-ccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEe-CCE-EEEEECCCeEEEcCEEEECcCCCc
Confidence 4444444 234588899999999999999999999999764 333 34544 788999999997654443
No 114
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=63.18 E-value=5.5 Score=40.30 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=39.5
Q ss_pred CcHHHHHHHHHHH-hCcEEEcCCccceEEEcCCC------cEEEEEe----CCe--EEEcCEEEE
Q 017499 158 GELPQAFARLSAV-YGGTYMLNKPECKVEFDEEG------KVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~------~~~gV~~----~ge--~i~a~~VV~ 209 (370)
.+|.+++.+.+.. .|+.++.++.|.+++.++++ ++.||.. +|+ +++||.||.
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVl 202 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVL 202 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 4788888888887 79999999999999984445 8888874 476 789999885
No 115
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=62.02 E-value=12 Score=37.86 Aligned_cols=56 Identities=14% Similarity=0.193 Sum_probs=45.0
Q ss_pred CCcHHHHHHHHHHHhCc--EEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 157 LGELPQAFARLSAVYGG--TYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg--~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
..||-+-+.+.++.+|. .+++++.|.++..++++....|.+ +|+++.||.||...-
T Consensus 98 ~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG 156 (549)
T 4ap3_A 98 QPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAG 156 (549)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 35788888888888987 789999999999876555666775 788999999996544
No 116
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=61.99 E-value=8.2 Score=39.65 Aligned_cols=51 Identities=18% Similarity=0.206 Sum_probs=42.6
Q ss_pred CcHHHHHHHHHHHhC-cEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEE
Q 017499 158 GELPQAFARLSAVYG-GTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~G-g~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
.+|.+++.+.+...| +.++.++.|.++..+ ++++.||.. +|+ .++||.||.
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~-~g~v~Gv~~~~~~~G~~~~i~A~~VVl 191 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVD-DGHVRGLVAMNMMEGTLVQIRANAVVM 191 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEE-TTEEEEEEEEETTTTEEEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEEcCCCcEEEEEcCeEEE
Confidence 378889988888889 999999999999885 678888852 577 689999885
No 117
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.26 E-value=17 Score=32.62 Aligned_cols=56 Identities=13% Similarity=0.051 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CCe--EEEcCEEEECCCCCCc
Q 017499 160 LPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EGE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 160 I~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~ge--~i~a~~VV~~~~y~p~ 216 (370)
-++..-|+.+..|..+++++.|.+|.-+ ++++.+|.. +|+ .+.||.||....+-|.
T Consensus 185 ~~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~ 245 (315)
T 3r9u_A 185 APSTVEKVKKNEKIELITSASVDEVYGD-KMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVR 245 (315)
T ss_dssp CHHHHHHHHHCTTEEEECSCEEEEEEEE-TTEEEEEEEECTTSCEEEECCSCEEECSCEEEC
T ss_pred CHHHHHHHHhcCCeEEEeCcEEEEEEcC-CCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCC
Confidence 3455566667889999999999999764 567777763 675 7899999987766653
No 118
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=61.23 E-value=11 Score=39.31 Aligned_cols=50 Identities=18% Similarity=0.125 Sum_probs=40.5
Q ss_pred cHHHHHHHHHHH-hCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 159 ELPQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 159 eI~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.+.+++-+.++. .|..+ +++.|.+|..+ ++++.+|.+ +|+.+.||.||..
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e-~g~V~GV~t~dG~~I~Ad~VVLA 176 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVE-NDRVVGAVTQMGLKFRAKAVVLT 176 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEES-SSBEEEEEETTSEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEec-CCEEEEEEECCCCEEECCEEEEc
Confidence 578888888877 57777 78899999874 678899987 7889999998853
No 119
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=60.06 E-value=11 Score=34.15 Aligned_cols=54 Identities=6% Similarity=-0.043 Sum_probs=39.0
Q ss_pred HHHHHHHHH-hCcEEEcCCccceEEEcCCCcEEEEEe-C-----CeEEEcCEEEECCCCCCc
Q 017499 162 QAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-E-----GETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 162 Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~-----ge~i~a~~VV~~~~y~p~ 216 (370)
+.+.+.... .|..+++++.|.+|.-+ ++++.+|.. + ++.+.||.||....+.|.
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 272 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGD-GKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPA 272 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEES-SSSEEEEEEEETTTTEEEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEcc-cCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCC
Confidence 333343434 59999999999999864 566777764 3 467999999987766653
No 120
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=59.19 E-value=3 Score=40.24 Aligned_cols=46 Identities=9% Similarity=0.056 Sum_probs=36.2
Q ss_pred CCcee-ecCCCCCcHHHHHHHHHHHhCcEEEcCCccc-eEEEcCCCcEEEEEeCCeEEEcCEEEECC
Q 017499 147 GSPYI-YPLYGLGELPQAFARLSAVYGGTYMLNKPEC-KVEFDEEGKVVGVTSEGETAKCKKVVCDP 211 (370)
Q Consensus 147 ~sPfl-yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~-~I~~~~~~~~~gV~~~ge~i~a~~VV~~~ 211 (370)
...|. +|.+|++.|++++.+ ..|+.++||++|. +|.. .+|+||...
T Consensus 187 ~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~~i~~----------------~~d~VI~a~ 234 (384)
T 2bi7_A 187 NHKFQGMPKCGYTQMIKSILN---HENIKVDLQREFIVEERT----------------HYDHVFYSG 234 (384)
T ss_dssp CCSEEEEETTHHHHHHHHHHC---STTEEEEESCCCCGGGGG----------------GSSEEEECS
T ss_pred cccccEEECcCHHHHHHHHHh---cCCCEEEECCeeehhhhc----------------cCCEEEEcC
Confidence 44566 999999999999876 4689999999998 7731 188888753
No 121
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=59.19 E-value=8.1 Score=39.39 Aligned_cols=53 Identities=15% Similarity=0.090 Sum_probs=40.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCC-eEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEG-ETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~g-e~i~a~~VV~~ 210 (370)
.++-+.+.+.++..|++++.++.|.++..++++....+. .+| ++++||+||..
T Consensus 148 ~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~A 202 (570)
T 3fmw_A 148 SRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGC 202 (570)
T ss_dssp HHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEc
Confidence 578889999998899999999999998875444222222 267 78999999963
No 122
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=57.41 E-value=12 Score=37.10 Aligned_cols=51 Identities=20% Similarity=0.305 Sum_probs=41.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe--CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~--~ge~i~a~~VV~~ 210 (370)
.+|.+++.+.+...|+.++.++.| ++..+ ++++.||.. ++..+.||.||..
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~-~~~v~Gv~v~~~~g~~~a~~VVlA 171 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVK-DGKVTGFVTEKRGLVEDVDKLVLA 171 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEE-TTEEEEEEETTTEEECCCSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEe-CCEEEEEEEEeCCCeEEeeeEEEC
Confidence 378899999888889999999999 99875 678888864 3445779998853
No 123
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=56.80 E-value=19 Score=35.82 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=39.6
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCe---EEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGE---TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge---~i~a~~VV~ 209 (370)
.++-+.+.+.++..|+.++.++.|.++..+++ .+. |. .+|+ +++||+||+
T Consensus 107 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~-v~~~~~~g~~~~~a~~vVg 160 (499)
T 2qa2_A 107 STTESVLEEWALGRGAELLRGHTVRALTDEGD-HVV-VEVEGPDGPRSLTTRYVVG 160 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-CEE-EEEECSSCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEE-EEEEcCCCcEEEEeCEEEE
Confidence 57888898888889999999999999987644 343 44 3553 799999996
No 124
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=56.68 E-value=18 Score=37.41 Aligned_cols=52 Identities=17% Similarity=0.135 Sum_probs=41.2
Q ss_pred CcHHHHHHHHHHHh-Cc-EEEcCCccceEEEcCC--CcEEEEEe----CCe--EEEcCEEEE
Q 017499 158 GELPQAFARLSAVY-GG-TYMLNKPECKVEFDEE--GKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~-Gg-~y~L~~~V~~I~~~~~--~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
..+.+.+.+.+... |+ +++.++.|.++..+++ |++.||.. +|+ .++||.||.
T Consensus 151 ~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVl 212 (643)
T 1jnr_A 151 ESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVIL 212 (643)
T ss_dssp TTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEE
Confidence 45778888888777 99 9999999999988633 28999863 465 689999885
No 125
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=55.58 E-value=19 Score=35.86 Aligned_cols=50 Identities=14% Similarity=0.062 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCe---EEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGE---TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge---~i~a~~VV~ 209 (370)
.++-+.+.+.++..|+.++.++.|.++..+++ .+. |.. +|+ +++||+||+
T Consensus 106 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~-v~~~~~~g~~~~~a~~vVg 159 (500)
T 2qa1_A 106 SVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GVT-VEVRGPEGKHTLRAAYLVG 159 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EEE-EEEEETTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eEE-EEEEcCCCCEEEEeCEEEE
Confidence 57888898988889999999999999987643 343 443 443 799999996
No 126
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=54.98 E-value=14 Score=35.01 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=37.9
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge~i~a~~VV~~ 210 (370)
.++-+.+.+.+.. +.+++++.|.++..+ ++.+. |. .+|+++.||.||..
T Consensus 127 ~~l~~~L~~~~~~--~~i~~~~~v~~i~~~-~~~v~-v~~~~g~~~~a~~vV~A 176 (407)
T 3rp8_A 127 AELQREMLDYWGR--DSVQFGKRVTRCEED-ADGVT-VWFTDGSSASGDLLIAA 176 (407)
T ss_dssp HHHHHHHHHHHCG--GGEEESCCEEEEEEE-TTEEE-EEETTSCEEEESEEEEC
T ss_pred HHHHHHHHHhCCc--CEEEECCEEEEEEec-CCcEE-EEEcCCCEEeeCEEEEC
Confidence 4677888777766 889999999999875 34443 44 48999999999964
No 127
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=54.43 E-value=16 Score=36.85 Aligned_cols=56 Identities=16% Similarity=0.247 Sum_probs=44.6
Q ss_pred CCcHHHHHHHHHHHhCc--EEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 157 LGELPQAFARLSAVYGG--TYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg--~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
..||-+-+.+.++.+|. .+++++.|.++..++++....|.+ +|+++.||.||...-
T Consensus 86 ~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG 144 (545)
T 3uox_A 86 QPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATG 144 (545)
T ss_dssp HHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcC
Confidence 45788888888888886 789999999998875555666775 789999999996544
No 128
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=54.41 E-value=2.4 Score=40.99 Aligned_cols=51 Identities=20% Similarity=0.074 Sum_probs=39.2
Q ss_pred CCcee-ecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEE-EcCEEEECC
Q 017499 147 GSPYI-YPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETA-KCKKVVCDP 211 (370)
Q Consensus 147 ~sPfl-yp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i-~a~~VV~~~ 211 (370)
...|. +|.+|++.|++++++ ..|+.++||++|.+|.. . | +.+ .||+||++.
T Consensus 193 ~~~~~~~p~gG~~~l~~~l~~---~~g~~I~l~~~V~~I~~---~----v----~~~~~aD~VI~t~ 245 (399)
T 1v0j_A 193 SDTYEGLPTDGYTAWLQNMAA---DHRIEVRLNTDWFDVRG---Q----L----RPGSPAAPVVYTG 245 (399)
T ss_dssp CCSEEECBTTHHHHHHHHHTC---STTEEEECSCCHHHHHH---H----H----TTTSTTCCEEECS
T ss_pred hhhhcccccccHHHHHHHHHh---cCCeEEEECCchhhhhh---h----h----hhcccCCEEEECC
Confidence 44575 999999999998876 56899999999998852 1 2 134 689999764
No 129
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=54.36 E-value=23 Score=34.55 Aligned_cols=58 Identities=10% Similarity=0.107 Sum_probs=43.1
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCC---eEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEG---ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~g---e~i~a~~VV~~~~y~p 215 (370)
-.++.+.+.+..+..|..+++++.|.++..+ ++.+.-...++ +.+.||.||...-+-|
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~-~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVK-NKQVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEEC-SSCEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEc-CCEEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 3578888889899999999999999999865 34433222333 6799999998655444
No 130
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=54.17 E-value=16 Score=36.83 Aligned_cols=55 Identities=9% Similarity=-0.023 Sum_probs=43.6
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p 215 (370)
-.++.+.+.+..+..|..+++++.|++|.-+ ++ +|.. +|+.+.||.||....+-|
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~---~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEEN-GA---VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGG-GT---EEEETTSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecC-CC---EEEECCCCEEEcCEEEEccCCCC
Confidence 3578889999999999999999999998643 22 3554 789999999998665544
No 131
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=53.85 E-value=19 Score=35.16 Aligned_cols=57 Identities=21% Similarity=0.336 Sum_probs=43.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE------eCCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT------SEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~------~~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.+|.-++++++ .|. .+|+.+.||.||....+-|
T Consensus 220 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~p 282 (474)
T 1zmd_A 220 MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKI-DVSIEAASGGKAEVITCDVLLVCIGRRP 282 (474)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCE-EEEEEETTSCCCEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceE-EEEEEecCCCCceEEEcCEEEECcCCCc
Confidence 57888888999999999999999999986533323 333 2578899999997655544
No 132
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=53.63 E-value=17 Score=35.48 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=46.9
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe------CCeEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS------EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~------~ge~i~a~~VV~~~~y~p 215 (370)
..|-+.|.. -.++.+.+-+..+..|..+++++.|.+|.-++++....|.. +|+.+.||.||....+-|
T Consensus 214 ~~~~~l~~~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 214 FQPQIGASM-DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp SSSSSSSSS-CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred eCCcccccc-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 344444422 34788888899999999999999999987521333445543 357899999997654444
No 133
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=52.91 E-value=7.8 Score=37.51 Aligned_cols=56 Identities=18% Similarity=0.151 Sum_probs=41.7
Q ss_pred CCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeC----CeEEEcCEEEECCCCC
Q 017499 154 LYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE----GETAKCKKVVCDPSYL 214 (370)
Q Consensus 154 ~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~----ge~i~a~~VV~~~~y~ 214 (370)
..|..++.+.+-+..+..|..+++|+.|.+|.- ++ + .+ .+ |+.+.||.||..+.+-
T Consensus 196 l~~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~--~~-v-~~-~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 196 VGGIGASKRLVEDLFAERNIDWIANVAVKAIEP--DK-V-IY-EDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TTCSTTHHHHHHHHHHHTTCEEECSCEEEEECS--SE-E-EE-ECTTSCEEEEECSEEEEECEEE
T ss_pred cCcchHHHHHHHHHHHHCCCEEEeCCEEEEEeC--Ce-E-EE-EecCCCceEEeeeEEEECCCCc
Confidence 345567889999999999999999999988742 22 1 12 23 7889999998765443
No 134
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.88 E-value=25 Score=34.28 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=46.1
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-e-CC--eEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-EG--ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~-~g--e~i~a~~VV~~~~y~p 215 (370)
..|-+.|.. -.++.+.+.+..+..|..+++++.|.+|.-+ ++++ .|. . +| +.+.||.||....+-|
T Consensus 202 ~~~~~l~~~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 271 (464)
T 2a8x_A 202 FLPRALPNE-DADVSKEIEKQFKKLGVTILTATKVESIADG-GSQV-TVTVTKDGVAQELKAEKVLQAIGFAP 271 (464)
T ss_dssp SSSSSSTTS-CHHHHHHHHHHHHHHTCEEECSCEEEEEEEC-SSCE-EEEEESSSCEEEEEESEEEECSCEEE
T ss_pred cCCcccccc-CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEc-CCeE-EEEEEcCCceEEEEcCEEEECCCCCc
Confidence 344444422 2477888888889999999999999999764 3333 343 2 56 6899999997655444
No 135
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=52.23 E-value=19 Score=37.45 Aligned_cols=53 Identities=13% Similarity=0.092 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHHh--CcEEEcCCccceEEEcCC--CcEEEEEe----CCe--EEEcCEEEE
Q 017499 157 LGELPQAFARLSAVY--GGTYMLNKPECKVEFDEE--GKVVGVTS----EGE--TAKCKKVVC 209 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~--Gg~y~L~~~V~~I~~~~~--~~~~gV~~----~ge--~i~a~~VV~ 209 (370)
..++.+++.+.+... |+.++.++.|.+++.+++ |++.||.. +|+ .++|+.||.
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVL 227 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVV 227 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEE
Confidence 347889998888887 999999999999998644 49999863 454 589999885
No 136
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=51.86 E-value=15 Score=34.38 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=30.8
Q ss_pred hCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 171 YGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 171 ~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
.++..++++.|.++..++++.+.-...+|++++||+||+-
T Consensus 122 ~~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlvVgA 161 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVLVGA 161 (412)
T ss_dssp CTTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEEC
T ss_pred ccceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEEEEC
Confidence 4667899999999986656665433358999999999963
No 137
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=51.77 E-value=18 Score=35.48 Aligned_cols=57 Identities=16% Similarity=0.121 Sum_probs=43.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCe-----EEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGE-----TAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge-----~i~a~~VV~~~~y~p 215 (370)
.++.+.+-+..+..|..+++++.|.++..++++++ .|. .+|+ .+.||.||...-+-|
T Consensus 227 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 227 QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKL-LVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCE-EEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcE-EEEEecCCCCceeEEEcCEEEECccccc
Confidence 46788888888999999999999999986545544 344 3433 789999998765554
No 138
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=51.77 E-value=27 Score=34.02 Aligned_cols=56 Identities=14% Similarity=0.202 Sum_probs=40.6
Q ss_pred CcHHHHHHHHH-HHhCcEEEcCCccceEEEcCCCcEEEEE-e--CC--eEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLS-AVYGGTYMLNKPECKVEFDEEGKVVGVT-S--EG--ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~Rla-Av~Gg~y~L~~~V~~I~~~~~~~~~gV~-~--~g--e~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+.. +..|..+++++.|.+|.-++ +.+ .|. . +| +.+.||.||....+-|
T Consensus 215 ~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~-~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p 276 (468)
T 2qae_A 215 EDVTNALVGALAKNEKMKFMTSTKVVGGTNNG-DSV-SLEVEGKNGKRETVTCEALLVSVGRRP 276 (468)
T ss_dssp HHHHHHHHHHHHHHTCCEEECSCEEEEEEECS-SSE-EEEEECC---EEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC-CeE-EEEEEcCCCceEEEECCEEEECCCccc
Confidence 46788888888 89999999999999997643 332 333 2 56 6899999997655444
No 139
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=51.73 E-value=23 Score=35.47 Aligned_cols=55 Identities=11% Similarity=0.228 Sum_probs=40.4
Q ss_pred CcHHHHHHHHHHHhC--cEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 158 GELPQAFARLSAVYG--GTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 158 geI~Qaf~RlaAv~G--g~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
.||-+-+-+.++.+| ..+++++.|.++..++++....|.+ +|+++.||.||...-
T Consensus 94 ~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG 151 (542)
T 1w4x_A 94 PEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASG 151 (542)
T ss_dssp HHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcC
Confidence 456666666677666 5789999999998865544556765 788999999996433
No 140
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=50.48 E-value=29 Score=32.14 Aligned_cols=51 Identities=16% Similarity=0.225 Sum_probs=40.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~ 209 (370)
.++.+.+.+.++.+|..+++++.|.+|..++++. ..|.+ +|+.+.+|.||.
T Consensus 74 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~-~~v~~~~g~~~~~~~li~ 125 (360)
T 3ab1_A 74 IDLVESLWAQAERYNPDVVLNETVTKYTKLDDGT-FETRTNTGNVYRSRAVLI 125 (360)
T ss_dssp HHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSC-EEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCce-EEEEECCCcEEEeeEEEE
Confidence 6788888888888999999999999998753333 34554 688899999885
No 141
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=49.61 E-value=23 Score=31.70 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C---Ce--EEEcCEEEECCCCCCc
Q 017499 161 PQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E---GE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 161 ~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~---ge--~i~a~~VV~~~~y~p~ 216 (370)
++...++.+..|..+++++.|.++.-+ +++.+|.. + |+ .+.||.||....+-|.
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEEECCCEECC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEEEEECCCCC
Confidence 344555666679999999999998753 56667764 3 76 7899999988777664
No 142
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=49.08 E-value=24 Score=34.44 Aligned_cols=57 Identities=18% Similarity=0.085 Sum_probs=43.0
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-e-C--Ce--EEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-S-E--GE--TAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~-~--ge--~i~a~~VV~~~~y~p 215 (370)
-.++.+.+-+..+..|..+++++.|.+|.-+ ++. ..|. . + |+ .+.||.||.....-|
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~-~~~-~~v~~~~~~~g~~~~i~~D~vv~a~G~~p 271 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKK-KDG-LHVRLEPAEGGEGEEVVVDKVLVAVGRKP 271 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEE-TTE-EEEEEEETTCCSCEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEe-CCE-EEEEEeecCCCceeEEEcCEEEECCCccc
Confidence 3578888888889999999999999999754 333 3344 2 5 77 899999997654444
No 143
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=49.02 E-value=22 Score=32.21 Aligned_cols=53 Identities=23% Similarity=0.270 Sum_probs=39.1
Q ss_pred HHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCCc
Q 017499 163 AFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 163 af~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~~y~p~ 216 (370)
.+.+.....|..+++++.|.+|.-+ ++++.+|.. +|+ .+.||.||....+.|.
T Consensus 195 ~l~~~l~~~gv~i~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (319)
T 3cty_A 195 AYVQEIKKRNIPYIMNAQVTEIVGD-GKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQ 253 (319)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEES-SSSEEEEEEEETTTCCEEEECCSEEEECCCEEEC
T ss_pred HHHHHHhcCCcEEEcCCeEEEEecC-CceEEEEEEEEcCCCceEEEecCEEEEeeCCccC
Confidence 3445555789999999999999764 456777763 565 6899999987666553
No 144
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=48.32 E-value=31 Score=31.39 Aligned_cols=57 Identities=9% Similarity=-0.029 Sum_probs=42.9
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CC--eEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EG--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~g--e~i~a~~VV~~~~y~p~ 216 (370)
.+..+.+.+..+..|..+++++.|.+|.- ++++.+|.. +| +.+.||.||....+-|.
T Consensus 191 ~~~~~~l~~~l~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 191 EASVKELMKAHEEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp HHHHHHHHHHHHTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred HHHHHHHHhccccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 35566666666777999999999999875 356666653 57 67999999987766654
No 145
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=48.10 E-value=32 Score=32.52 Aligned_cols=62 Identities=11% Similarity=0.040 Sum_probs=38.6
Q ss_pred HHHHHhhhcccC-CCceeecCCCCCcHHHHHHHHHHHh-CcEEEcCCccceEEEcC--C-C--cEEEEEe
Q 017499 135 KLYAESIARFQG-GSPYIYPLYGLGELPQAFARLSAVY-GGTYMLNKPECKVEFDE--E-G--KVVGVTS 197 (370)
Q Consensus 135 ~~yl~S~g~y~G-~sPflyp~yG~geI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~--~-~--~~~gV~~ 197 (370)
.+++..+|..-- ..++.+... ..++.+.+-+.+... |..++.++.|.++..++ + | ++.||..
T Consensus 123 ~~~L~~~Gv~~~~~g~~~~~~~-~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 123 HLFLQELEIPYEDEGDYVVVKH-AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHTTCCCEECSSEEEESC-HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHhhCcccccCCCeEEEcc-hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 456666665311 122322222 246677777766664 99999999999999864 3 5 8999864
No 146
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=47.32 E-value=11 Score=37.54 Aligned_cols=53 Identities=6% Similarity=0.018 Sum_probs=40.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcC-CCcEEEEEe----CC--eEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDE-EGKVVGVTS----EG--ETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~-~~~~~gV~~----~g--e~i~a~~VV~~ 210 (370)
.++.+.+.+.++..|+.+++++.|.++..++ ++...+|.. +| +.++||.||..
T Consensus 166 ~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A 225 (497)
T 2bry_A 166 RQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISA 225 (497)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEEC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEEC
Confidence 5788888888888999999999999998642 233455554 56 57999999963
No 147
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=47.32 E-value=34 Score=33.38 Aligned_cols=58 Identities=9% Similarity=-0.014 Sum_probs=43.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-C-------CeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E-------GETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~-------ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+-+..+..|..+++++.|.++.-++++....|.. + |+.+.||.||...-+-|
T Consensus 228 ~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 228 SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 4678888888899999999999999998654552334543 3 26799999997655544
No 148
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=46.68 E-value=23 Score=36.87 Aligned_cols=50 Identities=18% Similarity=0.197 Sum_probs=39.2
Q ss_pred cHHHHHHHHHHHh-CcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 159 ELPQAFARLSAVY-GGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 159 eI~Qaf~RlaAv~-Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
++.+.+-+.++.+ |..+ ++..|.++..+ ++++.||.+ +|+.+.||.||..
T Consensus 118 ~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d-~g~V~GV~t~~G~~i~Ad~VVLA 169 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDL-LQDTVIGVSAN-SGKFSSVTVRSGRAIQAKAAILA 169 (641)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEEE-TTEEEEEEETTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCCEE-EeeEEEEEEec-CCEEEEEEECCCcEEEeCEEEEC
Confidence 6778887777765 7776 57789988875 678889986 7889999998853
No 149
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=46.66 E-value=22 Score=34.47 Aligned_cols=56 Identities=20% Similarity=0.171 Sum_probs=43.9
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+.. ..+++++.|.++.- ++++..+..+|+.+.||.||....+-|.
T Consensus 190 ~~~~~~l~~~l~~~-v~i~~~~~v~~i~~--~~~v~~v~~~g~~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 190 KEVTDILEEKLKKH-VNLRLQEITMKIEG--EERVEKVVTDAGEYKAELVILATGIKPN 245 (449)
T ss_dssp HHHHHHHHHHHTTT-SEEEESCCEEEEEC--SSSCCEEEETTEEEECSEEEECSCEEEC
T ss_pred HHHHHHHHHHHHhC-cEEEeCCeEEEEec--cCcEEEEEeCCCEEECCEEEEeeCCccC
Confidence 46777888877778 99999999999864 3455667778999999999987666553
No 150
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=45.26 E-value=23 Score=35.75 Aligned_cols=54 Identities=15% Similarity=0.212 Sum_probs=39.7
Q ss_pred cHHHHHHHHHH-HhCcEEEcCCccceEEEcCCCcEEEEEe-C---Ce--EEEcC-EEEECCC
Q 017499 159 ELPQAFARLSA-VYGGTYMLNKPECKVEFDEEGKVVGVTS-E---GE--TAKCK-KVVCDPS 212 (370)
Q Consensus 159 eI~Qaf~RlaA-v~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~---ge--~i~a~-~VV~~~~ 212 (370)
....++-+.+. ..|.+++.++.|.+|++++++++.||.. + |+ +++|+ .||..+.
T Consensus 209 s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG 270 (546)
T 2jbv_A 209 SSSVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTG 270 (546)
T ss_dssp CHHHHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSH
T ss_pred CHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecC
Confidence 34566655554 5799999999999999964388999985 3 54 67897 7776543
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=43.14 E-value=30 Score=33.60 Aligned_cols=66 Identities=20% Similarity=0.213 Sum_probs=45.4
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CC--eEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EG--ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~g--e~i~a~~VV~~~~y~p 215 (370)
..|-+.|.. -.++.+.+.+..+..|..+++++.|.+|.-+ ++.+ .|.. +| +.+.||.||....+-|
T Consensus 208 ~~~~~l~~~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 208 FASEIVPTM-DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTS-GDGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp SSSSSSTTS-CHHHHHHHHHHHHHSSCCEECSEEEEEEECS-SSSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred cCCcccccc-cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEc-CCeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 344444422 3478888889999999999999999998754 2332 3332 44 7899999997554444
No 152
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=42.17 E-value=26 Score=34.33 Aligned_cols=66 Identities=18% Similarity=0.091 Sum_probs=46.9
Q ss_pred CCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eC----CeEEEcCEEEECCCCCC
Q 017499 147 GSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SE----GETAKCKKVVCDPSYLP 215 (370)
Q Consensus 147 ~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~----ge~i~a~~VV~~~~y~p 215 (370)
.+|-+.|.. -.++.+.+.+..+..|..+++++.|.+|.-++ + ...|. .+ |+.+.||.||....+-|
T Consensus 216 ~~~~~l~~~-~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~-~-~~~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 216 MMDGLMQGA-DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE-D-GVYVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp SSSSSSTTS-CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET-T-EEEEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred ECCcccccc-CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC-C-eEEEEEeccCCCceEEEcCEEEECcCCCc
Confidence 344444422 34778888888889999999999999997542 2 23454 35 78899999998665554
No 153
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=42.06 E-value=37 Score=32.04 Aligned_cols=50 Identities=16% Similarity=0.102 Sum_probs=36.1
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDP 211 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~ 211 (370)
+++-+.+.+.+ .|+.+++++.|.++..++ +.+. |.. +|+++.||.||...
T Consensus 99 ~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~Ad 149 (397)
T 2vou_A 99 DSIYGGLYELF--GPERYHTSKCLVGLSQDS-ETVQ-MRFSDGTKAEANWVIGAD 149 (397)
T ss_dssp HHHHHHHHHHH--CSTTEETTCCEEEEEECS-SCEE-EEETTSCEEEESEEEECC
T ss_pred HHHHHHHHHhC--CCcEEEcCCEEEEEEecC-CEEE-EEECCCCEEECCEEEECC
Confidence 35556665543 589999999999998753 4443 544 78899999999643
No 154
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=42.02 E-value=40 Score=32.16 Aligned_cols=74 Identities=5% Similarity=0.059 Sum_probs=49.1
Q ss_pred HHHHHhhhcccC-CCceeecCCCCCcHHHHHHHHHHH-hCcEEEcCCccceEEEcCC----------------C--cEEE
Q 017499 135 KLYAESIARFQG-GSPYIYPLYGLGELPQAFARLSAV-YGGTYMLNKPECKVEFDEE----------------G--KVVG 194 (370)
Q Consensus 135 ~~yl~S~g~y~G-~sPflyp~yG~geI~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~----------------~--~~~g 194 (370)
.++++.+|.--. ...|....+ .+++.+.+.+.+.. .|..++.++.|.++..+++ + ++.|
T Consensus 137 ~~~L~~~Gv~~~~~G~~~~~~~-~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~G 215 (344)
T 3jsk_A 137 DVFLDEVGVPYEDEGDYVVVKH-AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAG 215 (344)
T ss_dssp HHHHHHHTCCCEECSSEEEESC-HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEE
T ss_pred HHHHHHcCCcccccCCeEEEec-HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeE
Confidence 456666664201 112333332 25777888888777 5999999999999987642 3 7888
Q ss_pred EEe---------------CCeEEEcCEEEE
Q 017499 195 VTS---------------EGETAKCKKVVC 209 (370)
Q Consensus 195 V~~---------------~ge~i~a~~VV~ 209 (370)
|.. ++.+++|+.||.
T Consensus 216 Vv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ 245 (344)
T 3jsk_A 216 VVTNWTLVSMHHDDQSAMDPNTINAPVIIS 245 (344)
T ss_dssp EEEEEHHHHTTSSSSSCCBCEEEECSEEEE
T ss_pred EEeeeeeeeccCCcccccCceEEEcCEEEE
Confidence 864 235789999985
No 155
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=41.76 E-value=44 Score=32.76 Aligned_cols=58 Identities=19% Similarity=0.204 Sum_probs=43.2
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eC---C--eEEEcCEEEECCCCCCc
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SE---G--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~---g--e~i~a~~VV~~~~y~p~ 216 (370)
-.++.+.+-+..+..|..+++++.|.++.-++ +.+ .|. .+ | +.+.||.||....+-|.
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~-~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG-DGA-KVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET-TEE-EEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC-CEE-EEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 35788888888899999999999999998643 332 233 21 5 68999999987666553
No 156
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=40.86 E-value=41 Score=30.18 Aligned_cols=52 Identities=25% Similarity=0.276 Sum_probs=39.4
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.++.+|..+++++.|.++..++++ ...|.+++..+.+|.||..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~v~~~~g~~~~d~vVlA 118 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQADG-VFKLVTNEETHYSKTVIIT 118 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTTS-CEEEEESSEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCCC-cEEEEECCCEEEeCEEEEC
Confidence 578888888888899999999999999875332 3456654334999988853
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=40.81 E-value=50 Score=30.33 Aligned_cols=50 Identities=10% Similarity=0.110 Sum_probs=36.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~ 209 (370)
.++.+.+.+.++.+|..+++++.|.+|..++ +. ..|.+++..+.+|.||.
T Consensus 88 ~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~-~~-~~v~~~~g~~~~d~vVl 137 (369)
T 3d1c_A 88 ETYAEYLQVVANHYELNIFENTVVTNISADD-AY-YTIATTTETYHADYIFV 137 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECS-SS-EEEEESSCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEECC-Ce-EEEEeCCCEEEeCEEEE
Confidence 3566777778888999999999999987643 22 33555444688998885
No 158
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=40.61 E-value=54 Score=29.65 Aligned_cols=51 Identities=20% Similarity=0.308 Sum_probs=39.1
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.++.+|..+++++.|.+|..++ + ...|.+ +|+.+.+|.||..
T Consensus 65 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~-~~~v~~~~g~~~~~~~lv~A 116 (335)
T 2zbw_A 65 KDLVKGLVEQVAPFNPVYSLGERAETLEREG-D-LFKVTTSQGNAYTAKAVIIA 116 (335)
T ss_dssp HHHHHHHHHHHGGGCCEEEESCCEEEEEEET-T-EEEEEETTSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCEEEEEEECC-C-EEEEEECCCCEEEeCEEEEC
Confidence 5777778888888899999999999987643 3 344555 6778999998853
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.75 E-value=36 Score=33.00 Aligned_cols=56 Identities=20% Similarity=0.108 Sum_probs=41.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+..|..+++++.|.++.-+ ++.+ .|.. +|+.+.||.||....+-|
T Consensus 211 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 211 KQMAAIIKKRLKKKGVEVVTNALAKGAEER-EDGV-TVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEE-TTEE-EEEEEETTEEEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe-CCeE-EEEEEeCCceeEEEcCEEEECcCCCc
Confidence 477888888888999999999999998754 3332 3332 357899999997654444
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=39.12 E-value=45 Score=29.83 Aligned_cols=52 Identities=13% Similarity=0.186 Sum_probs=38.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCC-CcEEEEEe-CCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS-EGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~-~~~~gV~~-~ge~i~a~~VV~ 209 (370)
.++.+.+.+.++.+|..+++++.|..+..+.+ +....|.+ +|+.+++|.||.
T Consensus 56 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~ 109 (310)
T 1fl2_A 56 QKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIV 109 (310)
T ss_dssp HHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEE
Confidence 36777787888889999999999988865322 22345655 678899999885
No 161
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=37.47 E-value=39 Score=30.63 Aligned_cols=51 Identities=16% Similarity=0.051 Sum_probs=37.8
Q ss_pred HHHHHhCcEEEcCCccceEEEcCCC-cEEEEEe----CC--eEEEcCEEEECCCCCCc
Q 017499 166 RLSAVYGGTYMLNKPECKVEFDEEG-KVVGVTS----EG--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 166 RlaAv~Gg~y~L~~~V~~I~~~~~~-~~~gV~~----~g--e~i~a~~VV~~~~y~p~ 216 (370)
|+.+..|..+++++.|.++.-++++ ++.+|.. +| +.+.||.||....+-|.
T Consensus 203 ~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 260 (333)
T 1vdc_A 203 RALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPA 260 (333)
T ss_dssp HHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccc
Confidence 5566789999999999999764221 6666653 35 57899999987766654
No 162
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=36.99 E-value=46 Score=29.82 Aligned_cols=50 Identities=10% Similarity=-0.049 Sum_probs=36.3
Q ss_pred HHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCCc
Q 017499 166 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 166 RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~~y~p~ 216 (370)
++.+..|..+++++.|.++.-+ ++++.+|.. +|+ .+.||.||....+.|.
T Consensus 187 ~l~~~~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 242 (311)
T 2q0l_A 187 HAKNNDKIEFLTPYVVEEIKGD-ASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVN 242 (311)
T ss_dssp HHHTCTTEEEETTEEEEEEEEE-TTEEEEEEEEETTTCCEEEEECSEEEECSCEEEC
T ss_pred HHhhCCCeEEEeCCEEEEEECC-CCcEeEEEEEecCCCceEEEecCEEEEEecCccC
Confidence 3334479999999999998754 355656653 565 7899999987766654
No 163
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=36.13 E-value=57 Score=31.92 Aligned_cols=58 Identities=12% Similarity=0.192 Sum_probs=42.5
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eC---Ce--EEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SE---GE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~---ge--~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+-+..+..|..+++++.|.+|.-.+++.+. |. .+ |+ .+.||.||....+-|.
T Consensus 225 ~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~-v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 225 QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQ-VTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEE-EEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEE-EEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 467888888888999999999999998764344432 33 22 66 4789999987666553
No 164
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=35.69 E-value=34 Score=35.11 Aligned_cols=53 Identities=19% Similarity=0.133 Sum_probs=39.7
Q ss_pred CcHHHHHHHHHHHhCc--EEEcCCccceEEEcCC--CcEEEEE--e-----CC--eEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGG--TYMLNKPECKVEFDEE--GKVVGVT--S-----EG--ETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg--~y~L~~~V~~I~~~~~--~~~~gV~--~-----~g--e~i~a~~VV~~ 210 (370)
.++-+.|.+.++..|+ .+++++.|.++..+++ +..+.|. . +| ++++||+||+.
T Consensus 141 ~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgA 206 (639)
T 2dkh_A 141 ARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGC 206 (639)
T ss_dssp HHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEEC
Confidence 4788889999999997 9999999999987643 2223333 2 46 67999999963
No 165
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=35.48 E-value=51 Score=32.81 Aligned_cols=53 Identities=13% Similarity=0.168 Sum_probs=39.1
Q ss_pred HHHHHHHHHH-hCcEEEcCCccceEEEcCCCcEEEEEe-C---Ce--EE---EcCEEEECCCCC
Q 017499 161 PQAFARLSAV-YGGTYMLNKPECKVEFDEEGKVVGVTS-E---GE--TA---KCKKVVCDPSYL 214 (370)
Q Consensus 161 ~Qaf~RlaAv-~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~---ge--~i---~a~~VV~~~~y~ 214 (370)
.+++-+.+.. .|.++++++.|.+|+.+ ++++.||.. + |+ ++ .+|.||....-+
T Consensus 198 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~-~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~ 260 (546)
T 1kdg_A 198 VATYLQTALARPNFTFKTNVMVSNVVRN-GSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAF 260 (546)
T ss_dssp HHTHHHHHHTCTTEEEECSCCEEEEEEE-TTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHHhhCCCcEEEeCCEEEEEEEe-CCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChh
Confidence 3556665554 58999999999999986 678999985 3 64 23 788888765544
No 166
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=35.40 E-value=42 Score=32.89 Aligned_cols=46 Identities=17% Similarity=0.259 Sum_probs=35.0
Q ss_pred hCcEEEcCCccceEEEcCCC-cEEEEEe----------------CC--eEEEcCEEEECCCCCCc
Q 017499 171 YGGTYMLNKPECKVEFDEEG-KVVGVTS----------------EG--ETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 171 ~Gg~y~L~~~V~~I~~~~~~-~~~gV~~----------------~g--e~i~a~~VV~~~~y~p~ 216 (370)
.|..+++++.+.+|.-++++ ++.+|+. +| +.+.||.||....|-|.
T Consensus 270 ~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred ceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 88999999999998754336 7766653 24 57899999988777764
No 167
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=35.33 E-value=61 Score=29.27 Aligned_cols=49 Identities=20% Similarity=0.321 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~ 209 (370)
.++.+.+.+.++..|..+++++ |.++..+ ++. ..|.++|+.+++|.||.
T Consensus 70 ~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~-~~~-~~v~~~~~~~~~~~vv~ 118 (333)
T 1vdc_A 70 VELTDKFRKQSERFGTTIFTET-VTKVDFS-SKP-FKLFTDSKAILADAVIL 118 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-CCEEECS-SSS-EEEECSSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEeE-EEEEEEc-CCE-EEEEECCcEEEcCEEEE
Confidence 3778888888888999999997 8888754 333 33555888999999885
No 168
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=32.92 E-value=60 Score=28.98 Aligned_cols=45 Identities=27% Similarity=0.367 Sum_probs=34.3
Q ss_pred hCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCCc
Q 017499 171 YGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 171 ~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~~y~p~ 216 (370)
.|..+++++.|.+|.-+ ++++.+|.. +|+ .+.||.||....+.|.
T Consensus 193 ~gv~v~~~~~v~~i~~~-~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 243 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGD-GSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPN 243 (310)
T ss_dssp TTEEEESSEEEEEEEES-SSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred CCeEEecCCceEEEEcC-CCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccC
Confidence 69999999999999753 567777764 253 6899999987666553
No 169
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=32.66 E-value=64 Score=30.51 Aligned_cols=51 Identities=18% Similarity=0.173 Sum_probs=36.3
Q ss_pred CcHHHHHHHHHHH-hCc-EEEcCCccceEEEcCCCcEEEEEeC---C--eEEEcCEEEEC
Q 017499 158 GELPQAFARLSAV-YGG-TYMLNKPECKVEFDEEGKVVGVTSE---G--ETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv-~Gg-~y~L~~~V~~I~~~~~~~~~gV~~~---g--e~i~a~~VV~~ 210 (370)
.+|-+.+.+.+.. .|+ .+++++.|.++.. +++ +.....+ | ++++||.||..
T Consensus 107 ~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~-v~v~~~~~~~g~~~~~~ad~vV~A 164 (410)
T 3c96_A 107 GELQMILLAAVRERLGQQAVRTGLGVERIEE-RDG-RVLIGARDGHGKPQALGADVLVGA 164 (410)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETT-EEEEEEEETTSCEEEEEESEEEEC
T ss_pred HHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCc-cEEEEecCCCCCceEEecCEEEEC
Confidence 3677888777765 475 7999999999976 444 3322223 7 68999999963
No 170
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=32.51 E-value=14 Score=38.37 Aligned_cols=58 Identities=16% Similarity=0.063 Sum_probs=41.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
..+.+.+.+.....|..+++++.|.+|.-+ +.++..+.. +++++.||.||....+-|.
T Consensus 567 ~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~-~~~v~~~~~~~~~~i~aD~VV~A~G~~p~ 625 (690)
T 3k30_A 567 TFEVNRIQRRLIENGVARVTDHAVVAVGAG-GVTVRDTYASIERELECDAVVMVTARLPR 625 (690)
T ss_dssp GTCHHHHHHHHHHTTCEEEESEEEEEEETT-EEEEEETTTCCEEEEECSEEEEESCEEEC
T ss_pred chhHHHHHHHHHHCCCEEEcCcEEEEEECC-eEEEEEccCCeEEEEECCEEEECCCCCCC
Confidence 445677888888999999999999998632 222222223 5678999999987766654
No 171
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=32.28 E-value=62 Score=29.22 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=36.5
Q ss_pred HHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCe--EEEcCEEEECCCCCCc
Q 017499 166 RLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGE--TAKCKKVVCDPSYLPN 216 (370)
Q Consensus 166 RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge--~i~a~~VV~~~~y~p~ 216 (370)
++.+..|..+++++.|.+|.- ++++.+|.. +|+ .+.||.||....+-|.
T Consensus 196 ~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 250 (325)
T 2q7v_A 196 RAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPN 250 (325)
T ss_dssp HHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECSCEEES
T ss_pred HHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCC
Confidence 444446999999999999875 356667763 565 7899999987766654
No 172
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=32.08 E-value=92 Score=30.53 Aligned_cols=55 Identities=13% Similarity=-0.022 Sum_probs=41.1
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe---CC--eEEEcCEEEECCCCCC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS---EG--ETAKCKKVVCDPSYLP 215 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~---~g--e~i~a~~VV~~~~y~p 215 (370)
.++.+.+.+..+.. ..+++++.|+++..+ ++++. |.. +| +.+.||.||....+-|
T Consensus 215 ~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~-~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 215 EEMKRYAEKTFNEE-FYFDAKARVISTIEK-EDAVE-VIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp HHHHHHHHHHHHTT-SEEETTCEEEEEEEC-SSSEE-EEEECTTCCEEEEEESEEEECSCCEE
T ss_pred HHHHHHHHHHHhhC-cEEEECCEEEEEEEc-CCEEE-EEEEeCCCceEEEECCEEEEeeCCcc
Confidence 47777777777666 999999999999875 34443 332 67 7899999998766655
No 173
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=31.89 E-value=43 Score=29.48 Aligned_cols=52 Identities=13% Similarity=0.040 Sum_probs=40.3
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.+.+.+.+..+..|..++. +.|.+|.- ++ +|.. +|+.+.||.||....+-|.
T Consensus 175 ~~~~~~~~~l~~~gv~i~~-~~v~~i~~--~~---~v~~~~g~~~~~D~vi~a~G~~p~ 227 (297)
T 3fbs_A 175 EPDADQHALLAARGVRVET-TRIREIAG--HA---DVVLADGRSIALAGLFTQPKLRIT 227 (297)
T ss_dssp CCCHHHHHHHHHTTCEEEC-SCEEEEET--TE---EEEETTSCEEEESEEEECCEEECC
T ss_pred CCCHHHHHHHHHCCcEEEc-ceeeeeec--CC---eEEeCCCCEEEEEEEEEccCcccC
Confidence 6777888888899999985 88888753 23 5664 8999999999987766553
No 174
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=30.80 E-value=44 Score=32.15 Aligned_cols=57 Identities=19% Similarity=0.160 Sum_probs=40.0
Q ss_pred CCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe--CCeEEEcCEEEECCCCC
Q 017499 155 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS--EGETAKCKKVVCDPSYL 214 (370)
Q Consensus 155 yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~--~ge~i~a~~VV~~~~y~ 214 (370)
.+..+..+.+.++.+..|..+++|+.|++|. .+++.--.. +++.+.||.||..+-.-
T Consensus 197 ~~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~---~~~~~~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 197 GGIGASKRLVEDLFAERNIDWIANVAVKAIE---PDKVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp TCSTTHHHHHHHHHHHTTCEEECSCEEEEEC---SSEEEEECTTSCEEEEECSEEEEECEEE
T ss_pred hhhHHHHHHHHHHHHhCCeEEEeCceEEEEe---CCceEEEeeCCCceEeecceEEEeccCC
Confidence 3456677788888999999999999998873 233221112 35689999999765443
No 175
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=29.87 E-value=68 Score=31.84 Aligned_cols=51 Identities=14% Similarity=0.218 Sum_probs=39.2
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCC-CcEEEEEe-CCeEEEcCEEEE
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTS-EGETAKCKKVVC 209 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~-~~~~gV~~-~ge~i~a~~VV~ 209 (370)
++.+.+.+.++.+|..+++++.|.++..+.+ +....|.+ +|+.+++|.||.
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVl 320 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIII 320 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEE
Confidence 6778888888889999999999998864321 22345665 788999999885
No 176
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=29.73 E-value=45 Score=31.43 Aligned_cols=48 Identities=13% Similarity=0.099 Sum_probs=34.3
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
+|-+.+.+.+. ++.+++++.|.+|..++ +.+. |.. +|+++.||.||..
T Consensus 129 ~l~~~L~~~~~--~~~i~~~~~v~~i~~~~-~~v~-v~~~~g~~~~ad~vV~A 177 (398)
T 2xdo_A 129 DLRAILLNSLE--NDTVIWDRKLVMLEPGK-KKWT-LTFENKPSETADLVILA 177 (398)
T ss_dssp HHHHHHHHTSC--TTSEEESCCEEEEEECS-SSEE-EEETTSCCEEESEEEEC
T ss_pred HHHHHHHhhcC--CCEEEECCEEEEEEECC-CEEE-EEECCCcEEecCEEEEC
Confidence 45566665443 46789999999998754 4443 554 7889999999964
No 177
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=27.85 E-value=82 Score=31.19 Aligned_cols=65 Identities=15% Similarity=0.157 Sum_probs=46.4
Q ss_pred CCCceeecCCCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CC----eEEEcCEEEECCCC
Q 017499 146 GGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EG----ETAKCKKVVCDPSY 213 (370)
Q Consensus 146 G~sPflyp~yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~g----e~i~a~~VV~~~~y 213 (370)
-..|-+.|.++ .++.+...+..+..|..+++|+.|.++. +++....+.. +| +++.||.||...-.
T Consensus 261 e~~~~il~~~~-~~~~~~~~~~L~~~GV~v~~~~~v~~v~--~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 261 EALPIVLNMFE-KKLSSYAQSHLENTSIKVHLRTAVAKVE--EKQLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp CSSSSSSTTSC-HHHHHHHHHHHHHTTCEEETTEEEEEEC--SSEEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred ccccccccCCC-HHHHHHHHHHHHhcceeeecCceEEEEe--CCceEEEEEecCcccceeeeccCEEEEccCC
Confidence 35666677553 5788888888899999999999998874 3444444443 44 57999999965443
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=27.77 E-value=97 Score=27.53 Aligned_cols=49 Identities=14% Similarity=0.193 Sum_probs=36.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge~i~a~~VV~ 209 (370)
.++.+.+.+.+..+|..+++ +.|.++..+ ++. ..|. .+|+.+.+|.||.
T Consensus 59 ~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~g~~~~~~~vv~ 108 (311)
T 2q0l_A 59 LDFMQPWQEQCFRFGLKHEM-TAVQRVSKK-DSH-FVILAEDGKTFEAKSVII 108 (311)
T ss_dssp HHHHHHHHHHHHTTSCEEEC-SCEEEEEEE-TTE-EEEEETTSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEEc-CCE-EEEEEcCCCEEECCEEEE
Confidence 46777777777888999988 788888764 332 3343 4788999999885
No 179
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=27.57 E-value=49 Score=31.80 Aligned_cols=59 Identities=19% Similarity=0.110 Sum_probs=41.5
Q ss_pred CCCCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCc-EEEEEeC-----CeEEEcCEEEECCCCCC
Q 017499 155 YGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGK-VVGVTSE-----GETAKCKKVVCDPSYLP 215 (370)
Q Consensus 155 yG~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~-~~gV~~~-----ge~i~a~~VV~~~~y~p 215 (370)
.|..++.+.+-+..+..|..+++++.|.+|. .++. +..+..+ |+++.+|.||..+.+.+
T Consensus 205 ~~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 205 QGVGDSKGILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp TCCTTHHHHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred CcchHHHHHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 3556788888899999999999999998885 2221 1122123 56789999887655443
No 180
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=26.50 E-value=36 Score=32.10 Aligned_cols=42 Identities=21% Similarity=0.106 Sum_probs=32.0
Q ss_pred HHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCC
Q 017499 169 AVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPS 212 (370)
Q Consensus 169 Av~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~ 212 (370)
...|..+++++.+..+..+.++ ..|.+ +|+.++||.|+..+-
T Consensus 213 ~~~gi~v~~~~~v~~v~~~~~~--~~v~~~~g~~i~~D~vi~~~g 255 (401)
T 3vrd_B 213 ENALIEWHPGPDAAVVKTDTEA--MTVETSFGETFKAAVINLIPP 255 (401)
T ss_dssp TTCSEEEECTTTTCEEEEETTT--TEEEETTSCEEECSEEEECCC
T ss_pred HhcCcEEEeCceEEEEEecccc--eEEEcCCCcEEEeeEEEEecC
Confidence 4578999999999998875333 23554 899999999997653
No 181
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=26.24 E-value=1e+02 Score=27.51 Aligned_cols=50 Identities=14% Similarity=0.250 Sum_probs=38.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe----CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS----EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~----~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+..+|..+++++ |.++..+ ++.+ .+.+ +++.+.+|.||..
T Consensus 84 ~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~~~d~vvlA 137 (338)
T 3itj_A 84 SELMDRMREQSTKFGTEIITET-VSKVDLS-SKPF-KLWTEFNEDAEPVTTDAIILA 137 (338)
T ss_dssp HHHHHHHHHHHHHTTCEEECSC-EEEEECS-SSSE-EEEETTCSSSCCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEeE-EEEEEEc-CCEE-EEEEEecCCCcEEEeCEEEEC
Confidence 4888889999999999999999 9888764 3443 3433 6788999998853
No 182
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=25.50 E-value=1.1e+02 Score=27.35 Aligned_cols=50 Identities=20% Similarity=0.227 Sum_probs=36.8
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+..+|..+++ ..|.++..+ ++. ..|.++|+.+.+|.||..
T Consensus 72 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~~~~~~~~li~A 121 (319)
T 3cty_A 72 SELAKLFADHAANYAKIREG-VEVRSIKKT-QGG-FDIETNDDTYHAKYVIIT 121 (319)
T ss_dssp HHHHHHHHHHHHTTSEEEET-CCEEEEEEE-TTE-EEEEESSSEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEE-eeEEEEEEe-CCE-EEEEECCCEEEeCEEEEC
Confidence 36777777778888999888 688888764 332 335668888999998853
No 183
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=24.76 E-value=39 Score=31.90 Aligned_cols=52 Identities=25% Similarity=0.376 Sum_probs=40.2
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEECCCCCCc
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~~~y~p~ 216 (370)
.++.+.+.+..+..|..+++++.|.++. .+ +|.. +|+ +.||.||....+-|.
T Consensus 183 ~~~~~~l~~~l~~~gV~i~~~~~v~~i~---~~---~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 183 EELSNMIKDMLEETGVKFFLNSELLEAN---EE---GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp HHHHHHHHHHHHHTTEEEECSCCEEEEC---SS---EEEETTEE-EECSCEEEECCEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEE---ee---EEEECCCE-EEcCEEEECcCCCcC
Confidence 3678888888999999999999999885 12 3554 677 999999976555543
No 184
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=24.29 E-value=92 Score=30.31 Aligned_cols=52 Identities=23% Similarity=0.245 Sum_probs=37.5
Q ss_pred CcHHHHHHHHHHHhCcE--EEcCCccceEEEcCCCcEEEEEe-C---C--eEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGT--YMLNKPECKVEFDEEGKVVGVTS-E---G--ETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~--y~L~~~V~~I~~~~~~~~~gV~~-~---g--e~i~a~~VV~ 209 (370)
.++.+-+-+.++.+|.. +++++.|.+|..++++....|.+ + | +++.+|.||.
T Consensus 101 ~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVv 160 (464)
T 2xve_A 101 EVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVC 160 (464)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEE
T ss_pred HHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEE
Confidence 56777777788888887 88999999998754332344543 2 4 6789999885
No 185
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=24.10 E-value=1.2e+02 Score=26.73 Aligned_cols=50 Identities=16% Similarity=0.173 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEe-CCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTS-EGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+..+|..+++ +.|.++..+ +++ ..|.+ +|+.+.+|.||..
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~-~~~-~~v~~~~g~~~~~d~lvlA 120 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENR-GDE-FVVKTKRKGEFKADSVILG 120 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC---C-EEEEESSSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEec-CCE-EEEEECCCCEEEcCEEEEC
Confidence 47888888888889999999 899888764 333 34554 6789999998853
No 186
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=23.58 E-value=81 Score=28.15 Aligned_cols=47 Identities=6% Similarity=0.036 Sum_probs=34.4
Q ss_pred HHHhCcEEEcCCccceEEEcCCCcEEEEEe-C-----CeEEEcCEEEECCCCCCc
Q 017499 168 SAVYGGTYMLNKPECKVEFDEEGKVVGVTS-E-----GETAKCKKVVCDPSYLPN 216 (370)
Q Consensus 168 aAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~-~-----ge~i~a~~VV~~~~y~p~ 216 (370)
....|..+++++.|.++.-+ +...+|.. + ++.+.||.||....+-|.
T Consensus 199 l~~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 251 (332)
T 3lzw_A 199 LHASKVNVLTPFVPAELIGE--DKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSS 251 (332)
T ss_dssp HHHSSCEEETTEEEEEEECS--SSCCEEEEEETTSCCEEEEECSEEEECCCEECC
T ss_pred HhcCCeEEEeCceeeEEecC--CceEEEEEEecCCCceEEEECCEEEEeeccCCC
Confidence 46789999999999998753 22445543 3 467999999987666653
No 187
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=23.39 E-value=69 Score=32.02 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=36.2
Q ss_pred HHHHHHHhCcEEEcCCccceEEEcCC--CcEEEEEe---CCeE--E---EcCEEEECCCC
Q 017499 164 FARLSAVYGGTYMLNKPECKVEFDEE--GKVVGVTS---EGET--A---KCKKVVCDPSY 213 (370)
Q Consensus 164 f~RlaAv~Gg~y~L~~~V~~I~~~~~--~~~~gV~~---~ge~--i---~a~~VV~~~~y 213 (370)
+-+.++..|.+++.++.|.+|+++++ ++++||.. +|+. + .++.||..+.-
T Consensus 200 ~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa 259 (536)
T 1ju2_A 200 LLNKGNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGT 259 (536)
T ss_dssp GGGGSCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHH
T ss_pred hhhhhcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcc
Confidence 43445668999999999999999743 48999984 4653 4 46788865543
No 188
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=22.76 E-value=88 Score=30.19 Aligned_cols=53 Identities=13% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge~i~a~~VV~~~~y~p 215 (370)
-.++.+.+.+.....|..+++++.|+++.- +. |. .+|+.+.||.|+.....-|
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~---~~---v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING---NE---ITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET---TE---EEETTSCEEECSEEEECCCEEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC---Ce---eeecCCeEEeeeeEEEEeceec
Confidence 468889999999999999999999988742 22 33 4899999999997654444
No 189
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=22.62 E-value=1.6e+02 Score=26.36 Aligned_cols=51 Identities=16% Similarity=0.126 Sum_probs=36.0
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcC-CCcEEEEE-eCCeEEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDE-EGKVVGVT-SEGETAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~-~~~~~gV~-~~ge~i~a~~VV~ 209 (370)
.++.+.+.+.++.+|..++. ..|.++..++ ++....|. .+|+.+.+|.||.
T Consensus 65 ~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~ 117 (325)
T 2q7v_A 65 MELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVIL 117 (325)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEE
Confidence 36777787888889999987 5788887641 22212333 5788999999885
No 190
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=22.10 E-value=1.1e+02 Score=30.40 Aligned_cols=47 Identities=13% Similarity=0.097 Sum_probs=33.8
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeC---C--eEEEcCEEEE
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSE---G--ETAKCKKVVC 209 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~---g--e~i~a~~VV~ 209 (370)
++-+.+.+.++.. +++++.|.++..++ +.+.....+ | ++++||+||.
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~-~~v~v~~~~~~~G~~~~i~a~~vVg 190 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRD-DHVRATITDLRTGATRAVHARYLVA 190 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECS-SCEEEEEEETTTCCEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeC-CEEEEEEEECCCCCEEEEEeCEEEE
Confidence 5667777777766 88999999998764 444432233 6 5799999996
No 191
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=21.89 E-value=1.6e+02 Score=29.60 Aligned_cols=57 Identities=11% Similarity=-0.063 Sum_probs=44.2
Q ss_pred CCcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEE-eCCeEEEcCEEEECCCCCC
Q 017499 157 LGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVT-SEGETAKCKKVVCDPSYLP 215 (370)
Q Consensus 157 ~geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~-~~ge~i~a~~VV~~~~y~p 215 (370)
-.|+++.+.+.....|..++++..|+++..+ ++++ .|. .+++.+.+|.|+..----|
T Consensus 262 D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~-~~~~-~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 262 DQQCAVKVKLYMEEQGVMFKNGILPKKLTKM-DDKI-LVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEE-TTEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred chhHHHHHHHHHHhhcceeecceEEEEEEec-CCeE-EEEEcCCCeEEEEEEEEcccccC
Confidence 4589999999999999999999999998864 3433 344 4788889999987544434
No 192
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=21.84 E-value=65 Score=33.01 Aligned_cols=45 Identities=9% Similarity=-0.015 Sum_probs=35.6
Q ss_pred hCcEEEcCCccceEEEcCC-CcEEEEEe----CCe--EEEcCEEEECCCCCC
Q 017499 171 YGGTYMLNKPECKVEFDEE-GKVVGVTS----EGE--TAKCKKVVCDPSYLP 215 (370)
Q Consensus 171 ~Gg~y~L~~~V~~I~~~~~-~~~~gV~~----~ge--~i~a~~VV~~~~y~p 215 (370)
.|.++++++.|.+|..+++ +++.||.. +|+ +++||.||.....++
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~ 324 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVH 324 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcC
Confidence 3789999999999998643 48999974 354 678999998877764
No 193
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=21.66 E-value=69 Score=30.72 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=37.3
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcC-CCcEE--EEEe-CCe----EEEcCEEEE
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDE-EGKVV--GVTS-EGE----TAKCKKVVC 209 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~-~~~~~--gV~~-~ge----~i~a~~VV~ 209 (370)
.++.+-+...++.+|..+++++.|.+|..++ +++.+ .|.+ +|+ .+.+|.||.
T Consensus 127 ~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVl 186 (463)
T 3s5w_A 127 MEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVV 186 (463)
T ss_dssp HHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEE
Confidence 4666777777778899999999999988642 24443 3443 554 899999885
No 194
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=21.26 E-value=1.7e+02 Score=25.99 Aligned_cols=50 Identities=8% Similarity=0.211 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEEC
Q 017499 158 GELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCD 210 (370)
Q Consensus 158 geI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~~ 210 (370)
.++.+.+.+.+..+|..+++++ |..+..+ ++.+ .|..+|+.+.+|+||..
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~-~~~~-~v~~~~~~~~~~~lv~A 111 (320)
T 1trb_A 62 PLLMERMHEHATKFETEIIFDH-INKVDLQ-NRPF-RLNGDNGEYTCDALIIA 111 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEECCC-EEEEECS-SSSE-EEEESSCEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEee-eeEEEec-CCEE-EEEeCCCEEEcCEEEEC
Confidence 3677777788888999999997 8777653 3333 23457889999998853
No 195
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=20.76 E-value=1.3e+02 Score=26.81 Aligned_cols=51 Identities=14% Similarity=0.059 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHhCcEEEcCCccceEEEcCCCcEEEEEeCCeEEEcCEEEE
Q 017499 159 ELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVC 209 (370)
Q Consensus 159 eI~Qaf~RlaAv~Gg~y~L~~~V~~I~~~~~~~~~gV~~~ge~i~a~~VV~ 209 (370)
++.+.+-+-...++++..++..+..+...+++...-+..+|+.+++|.||.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~lii 111 (304)
T 4fk1_A 61 EFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLL 111 (304)
T ss_dssp HHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEE
Confidence 555555555667788888888877776543444333335899999998874
Done!