Query 017500
Match_columns 370
No_of_seqs 280 out of 2080
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 15:26:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017500.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017500hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 5.9E-84 2E-88 626.6 26.8 330 30-364 4-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 3.3E-78 1.1E-82 577.8 20.7 293 66-369 2-305 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 1.9E-76 6.6E-81 564.9 25.9 287 65-357 4-308 (312)
4 1dcs_A Deacetoxycephalosporin 100.0 1.1E-73 3.6E-78 545.3 18.8 279 66-360 3-307 (311)
5 1odm_A Isopenicillin N synthas 100.0 5.9E-72 2E-76 537.9 24.8 279 65-358 6-324 (331)
6 3on7_A Oxidoreductase, iron/as 100.0 1.2E-67 4.1E-72 496.3 21.9 259 66-357 2-276 (280)
7 3dkq_A PKHD-type hydroxylase S 93.7 0.13 4.5E-06 46.2 6.9 79 223-319 101-196 (243)
8 2rg4_A Uncharacterized protein 92.7 1.7 5.7E-05 38.1 12.5 43 266-320 166-209 (216)
9 3tht_A Alkylated DNA repair pr 83.7 2.8 9.4E-05 39.5 7.7 91 222-319 199-314 (345)
10 2hbt_A EGL nine homolog 1; pro 83.3 2.4 8.3E-05 37.9 6.9 80 223-318 119-213 (247)
11 2jig_A Prolyl-4 hydroxylase; h 82.1 3 0.0001 36.5 6.9 48 268-319 170-218 (224)
12 3itq_A Prolyl 4-hydroxylase, a 80.0 4.2 0.00014 35.5 7.1 66 248-318 143-212 (216)
13 2iuw_A Alkylated repair protei 75.0 6 0.00021 35.1 6.6 83 222-316 127-228 (238)
14 3s57_A Alpha-ketoglutarate-dep 69.7 6.9 0.00024 33.8 5.6 79 223-315 102-200 (204)
15 3i3q_A Alpha-ketoglutarate-dep 69.1 7.7 0.00026 33.7 5.8 77 223-315 107-200 (211)
16 2dbn_A Hypothetical protein YB 45.5 8.1 0.00028 37.6 1.8 55 64-122 97-151 (461)
17 4ay7_A Methylcobalamin\: coenz 45.2 43 0.0015 30.9 6.9 43 80-122 302-348 (348)
18 2opi_A L-fuculose-1-phosphate 42.7 12 0.00039 32.4 2.3 36 67-105 125-160 (212)
19 1m5a_B Insulin B chain; alpha 40.7 25 0.00087 20.4 2.7 20 81-100 8-27 (30)
20 2fk5_A Fuculose-1-phosphate al 40.1 19 0.00064 30.8 3.2 36 67-105 117-153 (200)
21 3o2g_A Gamma-butyrobetaine dio 38.3 14 0.00047 35.2 2.2 52 67-123 122-173 (388)
22 1e4c_P L-fuculose 1-phosphate 36.7 16 0.00055 31.5 2.3 36 67-105 122-157 (215)
23 3kt7_A PKHD-type hydroxylase T 36.2 37 0.0013 34.3 4.9 103 196-320 105-231 (633)
24 1pvt_A Sugar-phosphate aldolas 33.2 22 0.00077 31.1 2.6 50 66-118 160-211 (238)
25 1e5r_A Proline oxidase; oxidor 33.0 36 0.0012 31.0 4.0 21 296-316 155-175 (290)
26 1otj_A Alpha-ketoglutarate-dep 32.6 45 0.0015 29.7 4.7 52 64-121 14-65 (283)
27 2x4k_A 4-oxalocrotonate tautom 30.8 47 0.0016 21.6 3.5 24 189-212 18-41 (63)
28 2v9l_A Rhamnulose-1-phosphate 30.1 24 0.00081 31.8 2.3 48 67-117 179-228 (274)
29 2irp_A Putative aldolase class 28.6 35 0.0012 29.1 3.0 48 66-117 138-190 (208)
30 1oih_A Putative alkylsulfatase 28.3 58 0.002 29.3 4.7 54 64-123 24-78 (301)
31 3r1j_A Alpha-ketoglutarate-dep 28.0 64 0.0022 29.3 4.9 54 64-123 18-72 (301)
32 3abf_A 4-oxalocrotonate tautom 26.5 66 0.0022 21.1 3.6 23 190-212 17-39 (64)
33 3pvj_A Alpha-ketoglutarate-dep 26.2 55 0.0019 29.3 4.0 53 64-122 12-64 (277)
34 2da7_A Zinc finger homeobox pr 26.0 25 0.00085 24.9 1.3 38 178-215 15-52 (71)
35 2vf9_A Coat protein; virion, R 25.5 20 0.00069 26.6 0.7 18 286-303 49-66 (131)
36 3rcq_A Aspartyl/asparaginyl be 24.9 89 0.0031 26.6 4.9 43 278-320 139-186 (197)
37 1otf_A 4-oxalocrotonate tautom 24.8 69 0.0024 20.8 3.5 23 189-211 15-37 (62)
38 2opa_A Probable tautomerase YW 24.8 70 0.0024 20.7 3.5 23 189-211 15-37 (61)
39 2ww6_A Fibritin, T4 fibritin; 24.7 51 0.0017 18.5 2.1 13 260-272 12-24 (27)
40 2nys_A AGR_C_3712P; SSPB, stri 24.1 70 0.0024 26.7 3.8 61 188-266 14-81 (176)
41 3ocr_A Class II aldolase/adduc 24.0 40 0.0014 30.3 2.6 49 67-117 156-206 (273)
42 3pnt_A NAD+-glycohydrolase; gl 21.2 1.6E+02 0.0056 25.2 5.6 52 42-104 189-240 (268)
43 2do1_A Nuclear protein HCC-1; 21.1 1.2E+02 0.0042 20.1 3.9 39 70-118 7-45 (55)
44 3ry0_A Putative tautomerase; o 20.1 98 0.0034 20.5 3.5 24 188-211 14-37 (65)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=5.9e-84 Score=626.62 Aligned_cols=330 Identities=29% Similarity=0.501 Sum_probs=291.0
Q ss_pred ccchHHHHhCCCCCCCccccCCCCCcchhhc---cC--CCCCCcceeeCCCCCCC---ChHHHHHHHHHHHHHcceEEEe
Q 017500 30 KAGVKGLVDAGIVNIPRIFIRPPEELVEELT---SH--QTNFQVPVIDLDGVRGN---NLEEIVDQVRAAAETWGFFQVV 101 (370)
Q Consensus 30 ~~~v~~l~~~g~~~vP~~~~~~~~~~~~~~~---~~--~~~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~ 101 (370)
..+||+|+++|+.+||++|++|+++++.... .. ....+||||||+.+.++ .+.+++++|.+||++||||||+
T Consensus 4 ~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~ 83 (356)
T 1gp6_A 4 VERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLI 83 (356)
T ss_dssp CCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred cccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEe
Confidence 4689999999999999999999887764211 00 01246999999998643 3567899999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHHHhcCCHHHHHhhcccCC-CCCcccccCCCCcccCCCCccccccccccCCC-----CCCCCCC
Q 017500 102 NHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQ-TRNVRFNSNFDLHYSRTANWRDTLTISTLAST-----NLDPNEY 175 (370)
Q Consensus 102 nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~-~~~~gY~~~~~~~~~~~~d~~e~~~~~~~~p~-----~~~p~~~ 175 (370)
||||+.++++++++++++||+||.|+|+++..... ....||+...........||+|.|+++ ..|. ..||+.
T Consensus 84 nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~-~~p~~~~~~~~wP~~- 161 (356)
T 1gp6_A 84 NHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHL-AYPEEKRDLSIWPKT- 161 (356)
T ss_dssp SCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEE-EESGGGCCGGGSCCS-
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeee-cCCccccccccCCCc-
Confidence 99999999999999999999999999999876544 456899876655556678999999983 3231 269976
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhcC---CcceeeccccCCCCCCCCCCCCCCCcccCCceEEE
Q 017500 176 PEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGC---PKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTIL 252 (370)
Q Consensus 176 P~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~~~~l~~~yYP~~~~~~~~~g~~~HtD~~~lTlL 252 (370)
++.||+++++|+++|.+|+.+||++||++|||++++|.+.+. .....+|+||||+|++++..+|+++|||+|+||||
T Consensus 162 ~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL 241 (356)
T 1gp6_A 162 PSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFI 241 (356)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEE
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEE
Confidence 567999999999999999999999999999999999998765 35667999999999999999999999999999999
Q ss_pred ecCCCCCeEEEeCCeEEEecCCCCeEEEEeccchhhhcCCeeccccceeccCCCCCeeeEEEeecCCCCCCCc-eeecCc
Q 017500 253 LQDQIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASQVGPRVSVPCFFMGHNAEIPK-SYGPIK 331 (370)
Q Consensus 253 ~qd~~~GLqV~~~g~W~~V~p~pg~lvVnvGD~Le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~d~-~i~Pl~ 331 (370)
+||+++||||+++|+|++|+|+||++||||||+||+||||+|||++|||++++.++|||++||++|+. |+ +|+|++
T Consensus 242 ~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~---d~~~i~pl~ 318 (356)
T 1gp6_A 242 LHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK---DKIVLKPLP 318 (356)
T ss_dssp EECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT---TTCEECCCG
T ss_pred EEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCC---CCcEEeCCh
Confidence 99999999999999999999999999999999999999999999999999998889999999999998 78 999999
Q ss_pred cccCCCCCCCCCCccHHHHHHHHHhcCCCCCCc
Q 017500 332 ELTSAENPPIYRDFLASEYFSKRFSTVLDDNSP 364 (370)
Q Consensus 332 ~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~ 364 (370)
+|+++++|++|+++||+||+..++++++++|..
T Consensus 319 ~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 319 EMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp GGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred hhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 999999999999999999999999887776643
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=3.3e-78 Score=577.77 Aligned_cols=293 Identities=30% Similarity=0.542 Sum_probs=255.6
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHhhcccCCCCCcccccC
Q 017500 66 FQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSN 145 (370)
Q Consensus 66 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~gY~~~ 145 (370)
.+||||||+.+...++.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ..||...
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 369999999885335888999999999999999999999999999999999999999999999997532 2477643
Q ss_pred CCCcccCCCCccccccccccCCC---CCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhhcC---Cc
Q 017500 146 FDLHYSRTANWRDTLTISTLAST---NLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEIGC---PK 219 (370)
Q Consensus 146 ~~~~~~~~~d~~e~~~~~~~~p~---~~~p~~~P~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~~~---~~ 219 (370)
. .+....||+|.|.+ ...|. ..||+. |+.||+++++|+++|.+|+.+||++||++|||++++|.+... ..
T Consensus 78 ~--~e~~~~d~ke~~~~-~~~p~~~~~~wP~~-~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~ 153 (319)
T 1w9y_A 78 Q--AEVTDMDWESTFFL-KHLPISNISEVPDL-DEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGP 153 (319)
T ss_dssp C--CCGGGCCCCEEEEE-EEESCCGGGGCTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCC
T ss_pred c--ccCCCCChhhheee-ecCCcccccccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCc
Confidence 2 22456899999998 43332 269975 667999999999999999999999999999999999988543 24
Q ss_pred ceeeccccCCCCCCCCCCCCCCCcccCCceEEEecC-CCCCeEEEeCCeEEEecCCCCeEEEEeccchhhhcCCeecccc
Q 017500 220 EYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQD-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVK 298 (370)
Q Consensus 220 ~~~l~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~lvVnvGD~Le~~SnG~~kS~~ 298 (370)
...+|+||||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|+||++||||||+||+||||+|||++
T Consensus 154 ~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~ 233 (319)
T 1w9y_A 154 NFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVM 233 (319)
T ss_dssp EEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCC
T ss_pred cceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeeccc
Confidence 467999999999999999999999999999999995 7999999999999999999999999999999999999999999
Q ss_pred ceeccCCCCCeeeEEEeecCCCCCCCceeecCccccCCC---CCCCCCCccHHHHHHHHHhcCCCCCCc-cccCC
Q 017500 299 HRVVASQVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAE---NPPIYRDFLASEYFSKRFSTVLDDNSP-LHQLK 369 (370)
Q Consensus 299 HRV~~~~~~~R~Si~~F~~P~~d~~d~~i~Pl~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~~~~~-l~~~~ 369 (370)
|||++++.++|||++||++|+. |++|+|+++|++++ +|++|+++||+||+..+++.++.++.. ++.+|
T Consensus 234 HRVv~~~~~~R~Sia~F~~p~~---d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 234 HRVIAQKDGARMSLASFYNPGS---DAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp EEECCCSSSCCEEEEEEEECCT---TCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred ceecCCCCCCceEEEEEecCCC---CCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHH
Confidence 9999998889999999999998 89999999999988 699999999999999999988887754 45443
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=1.9e-76 Score=564.89 Aligned_cols=287 Identities=22% Similarity=0.334 Sum_probs=251.5
Q ss_pred CCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHhhcccCCCCCccccc
Q 017500 65 NFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNS 144 (370)
Q Consensus 65 ~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~gY~~ 144 (370)
..+||||||+.+.+ .+.+++++|.+||++||||||+||||+.++++++++++++||+||.|+|+++... ....+||..
T Consensus 4 ~~~iPvIDls~~~~-~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~ 81 (312)
T 3oox_A 4 TSAIDPVSFSLYAK-DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIP 81 (312)
T ss_dssp CCSSCCEETHHHHH-CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEEC
T ss_pred CCCCCeEEChHhcc-cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCcccccc
Confidence 45799999998754 5788999999999999999999999999999999999999999999999998654 445678864
Q ss_pred CCC--CcccCCCCccccccccccCC----------CCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhh
Q 017500 145 NFD--LHYSRTANWRDTLTISTLAS----------TNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKAEHL 212 (370)
Q Consensus 145 ~~~--~~~~~~~d~~e~~~~~~~~p----------~~~~p~~~P~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~ 212 (370)
... .......||+|.|.++...+ ...||+. ++.||+++++|+++|.+|+.+||++||++||+++++|
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f 160 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAE-IPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFF 160 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTT-STTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTT
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHH
Confidence 221 12235689999998743211 2379987 4569999999999999999999999999999999999
Q ss_pred hhhcCCcceeeccccCCCCCCCCCCCCCCCcccCCceEEEecCCCCCeEEE-eCCeEEEecCCCCeEEEEeccchhhhcC
Q 017500 213 LEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGLQVF-HDNQWVGVQPIVGGLVVNIGDFLQIISN 291 (370)
Q Consensus 213 ~~~~~~~~~~l~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GLqV~-~~g~W~~V~p~pg~lvVnvGD~Le~~Sn 291 (370)
.+.+..+...+|++|||||++++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++||||||+||+|||
T Consensus 161 ~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 240 (312)
T 3oox_A 161 KPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTN 240 (312)
T ss_dssp HHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTT
T ss_pred HHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhC
Confidence 987666667899999999998766699999999999999999999999997 5699999999999999999999999999
Q ss_pred CeeccccceeccCC----CCCeeeEEEeecCCCCCCCceeecCccccCCCCCCCCC-CccHHHHHHHHHhc
Q 017500 292 DKFKSVKHRVVASQ----VGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYR-DFLASEYFSKRFST 357 (370)
Q Consensus 292 G~~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~d~~i~Pl~~~v~~~~p~~y~-~~~~~ey~~~~~~~ 357 (370)
|+|||++|||+.++ ..+|||++||++|+. |++|+|+++|+++++|++|+ ++|++||+..+++.
T Consensus 241 G~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~---d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 241 NVLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS---DYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp TSSCCCCEEECCCCGGGTTSCEEECCEEECCCT---TCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred CeecCCCceEeCCCccCCCCCEEEEEEEecCCC---CcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 99999999998763 457999999999998 89999999999999999999 99999999998864
No 4
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.1e-73 Score=545.30 Aligned_cols=279 Identities=16% Similarity=0.205 Sum_probs=236.2
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhcCC-HHHHHhhcccCCCCCccccc
Q 017500 66 FQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELD-VELKKEFYTRDQTRNVRFNS 144 (370)
Q Consensus 66 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~lP-~eeK~~~~~~~~~~~~gY~~ 144 (370)
.+||||||+.+.++... ++|.+||++||||||+||||+.++++++++++++||+|| .|+|+++........+||..
T Consensus 3 ~~iPvIDls~l~~~~~~---~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~ 79 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ---DEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTG 79 (311)
T ss_dssp CCCCEEEHHHHHTTCSH---HHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEE
T ss_pred CCCcEEEchhhcCCCHH---HHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceee
Confidence 46999999987432222 399999999999999999999999999999999999999 99999987665556789986
Q ss_pred CCCC------cccCCCCccccccccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCC----Chhhhhh
Q 017500 145 NFDL------HYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGL----KAEHLLE 214 (370)
Q Consensus 145 ~~~~------~~~~~~d~~e~~~~~~~~p~~~~p~~~P~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl----~~~~~~~ 214 (370)
.... ......||+|.|.+ ...|+ .|| ++.||+.+++|+++|.+|+.+||++|+++||| ++++|.+
T Consensus 80 ~~~e~~~~~~~~~~~~d~~E~~~~-~~~~n-~wP---~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~~ 154 (311)
T 1dcs_A 80 LESESTAQITNTGSYSDYSMCYSM-GTADN-LFP---SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFLD 154 (311)
T ss_dssp C-----------------CEEEEE-CSSSC-CCS---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHHS
T ss_pred ccccccccccCCCCCCCcceeeec-cCCCC-CCC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHhh
Confidence 4322 22457899999999 54566 799 55699999999999999999999999999999 8889887
Q ss_pred hcCCcceeeccccCCCCCCCC--C--CCCCCCcccCCceEEEecC-CCCC---eEEEeCCeEEEecCCCCeEEEEeccch
Q 017500 215 IGCPKEYILLCQYYPPCPQPD--L--TLGATGHSDPSFLTILLQD-QIGG---LQVFHDNQWVGVQPIVGGLVVNIGDFL 286 (370)
Q Consensus 215 ~~~~~~~~l~~~yYP~~~~~~--~--~~g~~~HtD~~~lTlL~qd-~~~G---LqV~~~g~W~~V~p~pg~lvVnvGD~L 286 (370)
. ...+|++|||||++++ . .+|+++|||+|+||||+|| +++| |||+++|+|++|+|+||++||||||+|
T Consensus 155 ~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~l 230 (311)
T 1dcs_A 155 C----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAIA 230 (311)
T ss_dssp C----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHHH
T ss_pred c----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHHH
Confidence 5 5679999999999874 3 6889999999999999998 8999 999999999999999999999999999
Q ss_pred hhhcCCeeccccceeccCC-----CCCeeeEEEeecCCCCCCCceeecCccccCCCCCCCC--CCccHHHHHHHHHhcCC
Q 017500 287 QIISNDKFKSVKHRVVASQ-----VGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIY--RDFLASEYFSKRFSTVL 359 (370)
Q Consensus 287 e~~SnG~~kS~~HRV~~~~-----~~~R~Si~~F~~P~~d~~d~~i~Pl~~~v~~~~p~~y--~~~~~~ey~~~~~~~~~ 359 (370)
|+||||+|||++|||++++ .++||||+||++|+. |++|+ +++++++++|++| +++|++||+..+++..+
T Consensus 231 ~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~---d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 231 TLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNA---DFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCT---TCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCC---CcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999987 679999999999998 79999 9999999999999 99999999988877655
Q ss_pred C
Q 017500 360 D 360 (370)
Q Consensus 360 ~ 360 (370)
.
T Consensus 307 ~ 307 (311)
T 1dcs_A 307 R 307 (311)
T ss_dssp C
T ss_pred c
Confidence 3
No 5
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=5.9e-72 Score=537.88 Aligned_cols=279 Identities=22% Similarity=0.299 Sum_probs=244.0
Q ss_pred CCCcceeeCCCCCCC---ChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHH-hcCCHHHHHhhcccCCCCCc
Q 017500 65 NFQVPVIDLDGVRGN---NLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKF-NELDVELKKEFYTRDQTRNV 140 (370)
Q Consensus 65 ~~~iPvIDls~l~~~---~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~f-F~lP~eeK~~~~~~~~~~~~ 140 (370)
..+||||||+.+.++ .+.+++++|.+||++||||||+|||| +++++++++++| |+||.|+|+++.. +
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~ 76 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------R 76 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------T
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------c
Confidence 457999999988543 45678999999999999999999999 999999999999 9999999999854 4
Q ss_pred ccccCCC--Ccc------cCCCCccccccccccCC--------------CCCCCCC-CchhhHHHHHHHHHHHHHHHHHH
Q 017500 141 RFNSNFD--LHY------SRTANWRDTLTISTLAS--------------TNLDPNE-YPEVCRDAAREYIKNVTKLAETL 197 (370)
Q Consensus 141 gY~~~~~--~~~------~~~~d~~e~~~~~~~~p--------------~~~~p~~-~P~~fr~~~~~y~~~~~~la~~l 197 (370)
||..... ... ....||+|.|+++...+ ...||+. .++.||+++++|+++|.+|+.+|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 6653211 111 25689999999842211 1379975 14469999999999999999999
Q ss_pred HHHHHHHcCCChhhhhhhcCCcceeec--cccCC------C---CCCCCC-CCCCCCcccCCceEEEecCCCCCeEEE-e
Q 017500 198 FELLSLALGLKAEHLLEIGCPKEYILL--CQYYP------P---CPQPDL-TLGATGHSDPSFLTILLQDQIGGLQVF-H 264 (370)
Q Consensus 198 l~~la~~Lgl~~~~~~~~~~~~~~~l~--~~yYP------~---~~~~~~-~~g~~~HtD~~~lTlL~qd~~~GLqV~-~ 264 (370)
|++||++|||++++|.+.+......+| ++||| | |++++. .+|+++|||+|+||||+||+++||||+ +
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV~~~ 236 (331)
T 1odm_A 157 LKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQVETA 236 (331)
T ss_dssp HHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEEEET
T ss_pred HHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEEEcC
Confidence 999999999999999987766677899 99999 8 888887 899999999999999999999999999 5
Q ss_pred CCeEEEecCCCCeEEEEeccchhhhcCCeeccccceeccCCCCCeeeEEEeecCCCCCCCceeecCccccCCCCCCCCCC
Q 017500 265 DNQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASQVGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRD 344 (370)
Q Consensus 265 ~g~W~~V~p~pg~lvVnvGD~Le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~~d~~d~~i~Pl~~~v~~~~p~~y~~ 344 (370)
+| |++|+|+||++||||||+||+||||+|||++|||+. +.++|||++||++|+. |++|+|+++++++++ ++|++
T Consensus 237 ~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~---d~~i~pl~~~~~~~~-~~y~~ 310 (331)
T 1odm_A 237 AG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGY---DSVIDPFDPREPNGK-SDREP 310 (331)
T ss_dssp TE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCT---TCBCCCCCTTSTTCC-CSSCC
T ss_pred CC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCC---CCEEeCCCccccccc-cCCCC
Confidence 68 999999999999999999999999999999999986 4679999999999998 799999999999888 99999
Q ss_pred ccHHHHHHHHHhcC
Q 017500 345 FLASEYFSKRFSTV 358 (370)
Q Consensus 345 ~~~~ey~~~~~~~~ 358 (370)
+|++||+..+++..
T Consensus 311 ~t~~e~l~~~~~~~ 324 (331)
T 1odm_A 311 LSYGDYLQNGLVSL 324 (331)
T ss_dssp CBHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 99999999888654
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.2e-67 Score=496.31 Aligned_cols=259 Identities=23% Similarity=0.347 Sum_probs=218.8
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhcCCHHHHHhhcccCCCCCcccccC
Q 017500 66 FQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNELDVELKKEFYTRDQTRNVRFNSN 145 (370)
Q Consensus 66 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~lP~eeK~~~~~~~~~~~~gY~~~ 145 (370)
.+||||||+.. .++++|.+||++||||||+||||+.++++++++++++||+| |+|+++.. .+...+||...
T Consensus 2 ~~IPvIDls~~------~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~-~~~~~~GY~~~ 72 (280)
T 3on7_A 2 MKLETIDYRAA------DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMF-NRETHDGFFPA 72 (280)
T ss_dssp --CCEEETTST------THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBC-CTTTCCEEECC
T ss_pred CCCCEEECCCh------hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhcc-CCCCCCccccC
Confidence 46999999864 25789999999999999999999999999999999999998 78999754 34557899764
Q ss_pred C---CCcccCCCCccccccccccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--hh---hhhhcC
Q 017500 146 F---DLHYSRTANWRDTLTISTLASTNLDPNEYPEVCRDAAREYIKNVTKLAETLFELLSLALGLKA--EH---LLEIGC 217 (370)
Q Consensus 146 ~---~~~~~~~~d~~e~~~~~~~~p~~~~p~~~P~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~--~~---~~~~~~ 217 (370)
. ........||+|.|.+ + +||. .|+.||+++++|+++|.+|+.+||++||++||++. ++ |.+...
T Consensus 73 ~~~e~~~~~~~~D~kE~~~~-~-----p~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~ 145 (280)
T 3on7_A 73 SISETAKGHTVKDIKEYYHV-Y-----PWGR-IPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIA 145 (280)
T ss_dssp C--------CCCCSCEEEEE-C-----TTSC-CCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHT
T ss_pred ccccccCCCCcccHHHHHhc-C-----CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhc
Confidence 3 1122346799999887 3 4665 47789999999999999999999999999999863 33 444433
Q ss_pred Cc-ceeeccccCCCCCCCC--CCCCCCCcccCCceEEEecCCCCCeEEEe-CCeEEEecCCCCeEEEEeccchhhhcCCe
Q 017500 218 PK-EYILLCQYYPPCPQPD--LTLGATGHSDPSFLTILLQDQIGGLQVFH-DNQWVGVQPIVGGLVVNIGDFLQIISNDK 293 (370)
Q Consensus 218 ~~-~~~l~~~yYP~~~~~~--~~~g~~~HtD~~~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~lvVnvGD~Le~~SnG~ 293 (370)
.. ...+|++|||||+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++||||||+||+||||+
T Consensus 146 ~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~ 225 (280)
T 3on7_A 146 NSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGY 225 (280)
T ss_dssp TCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCc
Confidence 33 3679999999999775 47899999999999999999999999994 79999999999999999999999999999
Q ss_pred eccccceeccCC----CCCeeeEEEeecCCCCCCCceeecCccccCCCCCCCCCCccHHHHHHHHHhc
Q 017500 294 FKSVKHRVVASQ----VGPRVSVPCFFMGHNAEIPKSYGPIKELTSAENPPIYRDFLASEYFSKRFST 357 (370)
Q Consensus 294 ~kS~~HRV~~~~----~~~R~Si~~F~~P~~d~~d~~i~Pl~~~v~~~~p~~y~~~~~~ey~~~~~~~ 357 (370)
|||++|||+.++ ..+|||++||++|+. |++|+| ++|++||+..+++.
T Consensus 226 ~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~---d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 226 FPSTSHRVINPEGTDKTKSRISLPLFLHPHP---SVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp SCCCCEEEECCTTCCTTSCEEECCEEECCCT---TCBCSS--------------SCBHHHHHHHHHHH
T ss_pred ccCCCceEeCCCCCCCCCCeEEEEEEEcCCC---CCEECC--------------CccHHHHHHHHHHH
Confidence 999999998874 358999999999998 788874 58999999998875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=93.68 E-value=0.13 Score=46.23 Aligned_cols=79 Identities=22% Similarity=0.167 Sum_probs=50.9
Q ss_pred eccccCCCCCCCCCCCCCCCcccCC-----------ceEEEec--C----CCCCeEEEeCCeEEEecCCCCeEEEEeccc
Q 017500 223 LLCQYYPPCPQPDLTLGATGHSDPS-----------FLTILLQ--D----QIGGLQVFHDNQWVGVQPIVGGLVVNIGDF 285 (370)
Q Consensus 223 l~~~yYP~~~~~~~~~g~~~HtD~~-----------~lTlL~q--d----~~~GLqV~~~g~W~~V~p~pg~lvVnvGD~ 285 (370)
++++.|.+-. -..+|.|.. .+|+++. | +.|.|.+.....=..|+|..|.+|+.-.
T Consensus 101 ~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s-- 172 (243)
T 3dkq_A 101 PLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS-- 172 (243)
T ss_dssp EEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET--
T ss_pred ceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC--
Confidence 5566676521 135676653 4565543 4 1244666654444689999999999643
Q ss_pred hhhhcCCeeccccceeccCCCCCeeeEEEeecCC
Q 017500 286 LQIISNDKFKSVKHRVVASQVGPRVSVPCFFMGH 319 (370)
Q Consensus 286 Le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P~ 319 (370)
.++|+|..-....|++++.+++--
T Consensus 173 ----------~~lH~v~pV~~G~R~~~~~Wi~s~ 196 (243)
T 3dkq_A 173 ----------SSLHQVTPVLSGERTAAFMWLQSM 196 (243)
T ss_dssp ----------TSEEEECCEEEECEEEEEEEEEES
T ss_pred ----------CCeEcCccccccCEEEEEEehhhc
Confidence 368999765446899999987643
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=92.70 E-value=1.7 Score=38.13 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=33.9
Q ss_pred CeEEEecCCCCeEEEEeccchhhhcCCeeccccceeccCCC-CCeeeEEEeecCCC
Q 017500 266 NQWVGVQPIVGGLVVNIGDFLQIISNDKFKSVKHRVVASQV-GPRVSVPCFFMGHN 320 (370)
Q Consensus 266 g~W~~V~p~pg~lvVnvGD~Le~~SnG~~kS~~HRV~~~~~-~~R~Si~~F~~P~~ 320 (370)
..++.|.|.+|.+||.-+.+ .|+|..+.. ++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 35678999999999987653 799988654 69999999998864
No 9
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=83.67 E-value=2.8 Score=39.53 Aligned_cols=91 Identities=20% Similarity=0.125 Sum_probs=57.3
Q ss_pred eeccccCCCCCCCCCCCCCCCcccCC------ceEEEecCCCCCeEEEe-CCeEEEecCCCCeEEEEeccchhhhcCCee
Q 017500 222 ILLCQYYPPCPQPDLTLGATGHSDPS------FLTILLQDQIGGLQVFH-DNQWVGVQPIVGGLVVNIGDFLQIISNDKF 294 (370)
Q Consensus 222 ~l~~~yYP~~~~~~~~~g~~~HtD~~------~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~lvVnvGD~Le~~SnG~~ 294 (370)
...+|+|.+- -++++|.|-. ..||=+- ...=+.+.. +|.++.+.-.+|.++|.-|+.=..|..|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 3567899762 2788999884 2233222 111234443 367899999999999999998888876654
Q ss_pred ccccceec------------------cCCCCCeeeEEEeecCC
Q 017500 295 KSVKHRVV------------------ASQVGPRVSVPCFFMGH 319 (370)
Q Consensus 295 kS~~HRV~------------------~~~~~~R~Si~~F~~P~ 319 (370)
+-...-+- ..+...|+|+.|=.-+.
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~ 314 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQ 314 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCC
Confidence 43332211 01134799999765554
No 10
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=83.33 E-value=2.4 Score=37.90 Aligned_cols=80 Identities=20% Similarity=0.354 Sum_probs=52.4
Q ss_pred eccccCCCCCCCCCCCCCCCcccC-----CceEEEec--CC------CCCeEEEeCC--eEEEecCCCCeEEEEeccchh
Q 017500 223 LLCQYYPPCPQPDLTLGATGHSDP-----SFLTILLQ--DQ------IGGLQVFHDN--QWVGVQPIVGGLVVNIGDFLQ 287 (370)
Q Consensus 223 l~~~yYP~~~~~~~~~g~~~HtD~-----~~lTlL~q--d~------~~GLqV~~~g--~W~~V~p~pg~lvVnvGD~Le 287 (370)
+.+..|++. .-...+|.|. -.+|+++. ++ .|.|.++..+ ....|.|..|.+|++-.+.
T Consensus 119 ~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~-- 191 (247)
T 2hbt_A 119 AMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR-- 191 (247)
T ss_dssp EEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST--
T ss_pred EEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC--
Confidence 345567641 1234567776 26788764 31 3346777654 6789999999999976531
Q ss_pred hhcCCeeccccceeccCCCCCeeeEEEeecC
Q 017500 288 IISNDKFKSVKHRVVASQVGPRVSVPCFFMG 318 (370)
Q Consensus 288 ~~SnG~~kS~~HRV~~~~~~~R~Si~~F~~P 318 (370)
-.+|.|.. ..+.|+||+..+.-
T Consensus 192 --------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 --------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp --------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred --------Cceeeecc-CCCEEEEEEEEEcC
Confidence 15899976 34699999876543
No 11
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=82.05 E-value=3 Score=36.46 Aligned_cols=48 Identities=15% Similarity=0.167 Sum_probs=34.3
Q ss_pred EEEecCCCCeEEEEeccchhhhcCCee-ccccceeccCCCCCeeeEEEeecCC
Q 017500 268 WVGVQPIVGGLVVNIGDFLQIISNDKF-KSVKHRVVASQVGPRVSVPCFFMGH 319 (370)
Q Consensus 268 W~~V~p~pg~lvVnvGD~Le~~SnG~~-kS~~HRV~~~~~~~R~Si~~F~~P~ 319 (370)
-+.|+|..|.+|+.-- ...||.. ..++|+|..-....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 4789999999988653 1233433 5789999765446899999887654
No 12
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=80.04 E-value=4.2 Score=35.54 Aligned_cols=66 Identities=17% Similarity=0.106 Sum_probs=40.8
Q ss_pred ceEEEec--C-CCCCeEEEeCCeEEEecCCCCeEEEEeccchhhhcCCe-eccccceeccCCCCCeeeEEEeecC
Q 017500 248 FLTILLQ--D-QIGGLQVFHDNQWVGVQPIVGGLVVNIGDFLQIISNDK-FKSVKHRVVASQVGPRVSVPCFFMG 318 (370)
Q Consensus 248 ~lTlL~q--d-~~~GLqV~~~g~W~~V~p~pg~lvVnvGD~Le~~SnG~-~kS~~HRV~~~~~~~R~Si~~F~~P 318 (370)
.+|+++- | ..||=-+.... =+.|+|..|.+|+.-.- ..||. -..++|++..--...|+++..+++-
T Consensus 143 ~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 143 ISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEYF----YQDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEECC----CSSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred EEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEecc----CCCCCCCCccccccceeccccEEEEEeeEec
Confidence 4777764 3 23443344332 27899999998886531 12332 2467999876544689999887654
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=74.95 E-value=6 Score=35.05 Aligned_cols=83 Identities=18% Similarity=0.158 Sum_probs=50.5
Q ss_pred eeccccCCCCCCCCCCCCCCCcccCC--------ceEEEecCCCCCeEEEeC-----------CeEEEecCCCCeEEEEe
Q 017500 222 ILLCQYYPPCPQPDLTLGATGHSDPS--------FLTILLQDQIGGLQVFHD-----------NQWVGVQPIVGGLVVNI 282 (370)
Q Consensus 222 ~l~~~yYP~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~~-----------g~W~~V~p~pg~lvVnv 282 (370)
...+|+|++- .-++++|.|-. ..||=+-.. .=+.+... +..+.+.-.+|.++|.-
T Consensus 127 ~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 3567999773 23688888842 223323211 11233221 36889999999999999
Q ss_pred ccchhhhcCCeeccccceeccCCCCCeeeEEEee
Q 017500 283 GDFLQIISNDKFKSVKHRVVASQVGPRVSVPCFF 316 (370)
Q Consensus 283 GD~Le~~SnG~~kS~~HRV~~~~~~~R~Si~~F~ 316 (370)
|+.=..|.-|.-+.. .....|+|+.|=.
T Consensus 201 G~~r~~w~H~I~~~~------~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQHRVPKEY------HSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEEEEECCCS------SCCCCEEEEEEEC
T ss_pred hhhhCccEecCCCcC------CCCCCEEEEEeee
Confidence 987666655443311 1245899999753
No 14
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=69.73 E-value=6.9 Score=33.77 Aligned_cols=79 Identities=15% Similarity=0.131 Sum_probs=48.0
Q ss_pred eccccCCCCCCCCCCCCCCCcccCC--------ceEEEecCCCCCeEEEeC----------CeEEEecCCCCeEEEEecc
Q 017500 223 LLCQYYPPCPQPDLTLGATGHSDPS--------FLTILLQDQIGGLQVFHD----------NQWVGVQPIVGGLVVNIGD 284 (370)
Q Consensus 223 l~~~yYP~~~~~~~~~g~~~HtD~~--------~lTlL~qd~~~GLqV~~~----------g~W~~V~p~pg~lvVnvGD 284 (370)
..+|+|.+- .-++++|.|-. ..+|=+- ...=+.+.+. +..+.+.-.+|.++|.-|+
T Consensus 102 ~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IasvSLG-~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDG-----SDHICEHRDDERELAPGSPIASVSFG-ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESST-----TCCEEEECCCCTTBCTTCCEEEEEEE-SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCC-----CCcccceecChhhccCCCcEEEEECC-CceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 457899773 23678888862 1233222 1112333321 2567888899999999998
Q ss_pred chhhhcCCeeccccceeccCC--CCCeeeEEEe
Q 017500 285 FLQIISNDKFKSVKHRVVASQ--VGPRVSVPCF 315 (370)
Q Consensus 285 ~Le~~SnG~~kS~~HRV~~~~--~~~R~Si~~F 315 (370)
.=..|. |.|-... ...|+|+.|=
T Consensus 176 ~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhheeE--------eeccccCCCCCCEEEEEee
Confidence 766665 4443322 3589999873
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=69.12 E-value=7.7 Score=33.74 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=47.7
Q ss_pred eccccCCCCCCCCCCCCCCCcccC-----C--ceEEEecCCCCCeEEEe---CCeEEEecCCCCeEEEEeccchhhhcCC
Q 017500 223 LLCQYYPPCPQPDLTLGATGHSDP-----S--FLTILLQDQIGGLQVFH---DNQWVGVQPIVGGLVVNIGDFLQIISND 292 (370)
Q Consensus 223 l~~~yYP~~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~~GLqV~~---~g~W~~V~p~pg~lvVnvGD~Le~~SnG 292 (370)
..+|+|.+- . ++++|.|- + .+||-+- ...=+.+.+ .+.++.+.-.+|.++|.-|+. +.|
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG-~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~-r~~--- 175 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG-LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGES-RLF--- 175 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE-SCEEEEECCSSTTSCCEEEEECTTCEEEECGGG-TTC---
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC-CCeEEEEecccCCCceEEEECCCCCEEEECchH-Hce---
Confidence 567999762 3 78999992 2 2233332 111233332 256888999999999998876 223
Q ss_pred eeccccceeccCCC-------CCeeeEEEe
Q 017500 293 KFKSVKHRVVASQV-------GPRVSVPCF 315 (370)
Q Consensus 293 ~~kS~~HRV~~~~~-------~~R~Si~~F 315 (370)
.|.|..... ..|+|+.|=
T Consensus 176 -----~H~I~~~~~~~~p~~~~~RIsLTFR 200 (211)
T 3i3q_A 176 -----YHGIQPLKAGFHPLTIDCRYNLTFR 200 (211)
T ss_dssp -----CEEECCCCCCCBTTTBTCEEEEEEE
T ss_pred -----EeccCcccCCcCCCCCCCEEEEEee
Confidence 366654332 369999875
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=45.55 E-value=8.1 Score=37.57 Aligned_cols=55 Identities=11% Similarity=0.219 Sum_probs=40.8
Q ss_pred CCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhc
Q 017500 64 TNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNE 122 (370)
Q Consensus 64 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~ 122 (370)
...-||.||++++.++ .+.++..+.+++.|++.|.|. ||.+...+..+.+.+|.+
T Consensus 97 G~~~iP~i~f~di~~~---~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 97 GDAVWPVLSYADIKAG---HVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp TCCSSCEEEHHHHHHT---CCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceecHHHhcCC---CCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 4457999999876321 122455677889999988876 899888888888888864
No 17
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=45.23 E-value=43 Score=30.93 Aligned_cols=43 Identities=14% Similarity=0.153 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHHHHHcceEEEecCCCCH----HHHHHHHHHHHHHhc
Q 017500 80 NLEEIVDQVRAAAETWGFFQVVNHGIPL----NVLEEMIEGISKFNE 122 (370)
Q Consensus 80 ~~~~~~~~l~~A~~~~GFF~v~nHGi~~----~l~~~~~~~~~~fF~ 122 (370)
..+++.+++.+.++.-||..=.+|||+. +-++.+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 4567777888888888887777899764 789999999999985
No 18
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=42.71 E-value=12 Score=32.40 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=29.3
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCC
Q 017500 67 QVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGI 105 (370)
Q Consensus 67 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi 105 (370)
.||++++.... ..++++.+.+++++.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPG---SPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987653 4567888999998888888999995
No 19
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=40.68 E-value=25 Score=20.40 Aligned_cols=20 Identities=20% Similarity=0.346 Sum_probs=17.0
Q ss_pred hHHHHHHHHHHHHHcceEEE
Q 017500 81 LEEIVDQVRAAAETWGFFQV 100 (370)
Q Consensus 81 ~~~~~~~l~~A~~~~GFF~v 100 (370)
...+++.|.-.|.+-|||+-
T Consensus 8 Gs~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp THHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHHhccCccccC
Confidence 35788999999999999983
No 20
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=40.14 E-value=19 Score=30.79 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=29.1
Q ss_pred Cccee-eCCCCCCCChHHHHHHHHHHHHHcceEEEecCCC
Q 017500 67 QVPVI-DLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGI 105 (370)
Q Consensus 67 ~iPvI-Dls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi 105 (370)
.||++ ++... ...++++.+.+++++.-.+.|.|||+
T Consensus 117 ~ip~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~ 153 (200)
T 2fk5_A 117 EVPVLAPKTVS---ATEEAALSVAEALREHRACLLRGHGA 153 (200)
T ss_dssp CEEEECCSCCS---SSHHHHHHHHHHHHHCSEEEETTTEE
T ss_pred CceEecCCCCC---CcHHHHHHHHHHhCcCCEEEECCCCc
Confidence 69999 77654 34578888999999888899999994
No 21
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=38.34 E-value=14 Score=35.19 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=39.8
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhcC
Q 017500 67 QVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNEL 123 (370)
Q Consensus 67 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~l 123 (370)
++|.||++.+.. ..+.+.++.+|+.++|+..+.|-.++.+ ...+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~--~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR--YDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH--CHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhc--CHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999977642 3567889999999999999999888753 445566666544
No 22
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=36.69 E-value=16 Score=31.51 Aligned_cols=36 Identities=17% Similarity=0.262 Sum_probs=29.1
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCC
Q 017500 67 QVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGI 105 (370)
Q Consensus 67 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi 105 (370)
.||++++.... ..++++.+.+++++.-.+.+.|||+
T Consensus 122 ~ip~~~y~~~g---~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFG---TRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTT---CHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCC---cHHHHHHHHHHhccCCEEEEcCCCc
Confidence 69999987653 3577888999998888888999995
No 23
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=36.20 E-value=37 Score=34.31 Aligned_cols=103 Identities=14% Similarity=0.095 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCChhhhhhhcCCcceeeccccCCCCCCCCCCCCCCCcccC-C--ceEEEec--C--------CCCCeEE
Q 017500 196 TLFELLSLALGLKAEHLLEIGCPKEYILLCQYYPPCPQPDLTLGATGHSDP-S--FLTILLQ--D--------QIGGLQV 262 (370)
Q Consensus 196 ~ll~~la~~Lgl~~~~~~~~~~~~~~~l~~~yYP~~~~~~~~~g~~~HtD~-~--~lTlL~q--d--------~~~GLqV 262 (370)
.++..|+...|++. +.. ....+.++.|++. -....|.|. + .||+++- + ..|-|++
T Consensus 105 ~Fr~~Ls~iTGi~~--Lsg----~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~L 172 (633)
T 3kt7_A 105 QYRDFFGYVTKAGK--LSG----SKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRL 172 (633)
T ss_dssp HHHHHHHHHHTCCC--CCS----SCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEE
T ss_pred HHHHHHHHHhCCcc--cCC----CceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEE
Confidence 45567777777632 110 0111334556542 135678884 2 3566552 2 1344777
Q ss_pred EeCC--------eEEEecCCCCeEEEEeccchhhhcC-CeeccccceeccC-CCCCeeeEEE-eecCCC
Q 017500 263 FHDN--------QWVGVQPIVGGLVVNIGDFLQIISN-DKFKSVKHRVVAS-QVGPRVSVPC-FFMGHN 320 (370)
Q Consensus 263 ~~~g--------~W~~V~p~pg~lvVnvGD~Le~~Sn-G~~kS~~HRV~~~-~~~~R~Si~~-F~~P~~ 320 (370)
+..+ ....|.|.-|.+|++.- . + ..+|.|... ..+.|+||+- |+.|..
T Consensus 173 yd~d~~~~P~~d~~~~I~P~fNrLV~F~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~~p~~ 231 (633)
T 3kt7_A 173 FPSILPNVPHSDPSAKLVPQFNQIAFFKV-------LPG---FSFHDXEEVKVDKHRLSIQGWYHIPQV 231 (633)
T ss_dssp CCEEETTEECSSCSEEECCCTTEEEEEEC-------CTT---TCCEEECCBCSSCCEEEEEEEEECCCT
T ss_pred ecCCCcCCCCCCceEEEecCCCeEEEEEc-------CCC---CCcCCCCccCCCCCEEEEEEEeccCCC
Confidence 6422 36689999999999642 1 1 246755211 2678999975 555544
No 24
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=33.17 E-value=22 Score=31.12 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=34.6
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCH--HHHHHHHHHHH
Q 017500 66 FQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPL--NVLEEMIEGIS 118 (370)
Q Consensus 66 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~--~l~~~~~~~~~ 118 (370)
..||++++... ...++++.+.+++++.-.+.+.|||+=. +.+++++..+.
T Consensus 160 ~~v~~~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 160 QGISVVEFEKP---GSVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp SCCEEECCCST---TCHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred CCceEecCCCC---CcHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 36999998655 2457788899999888888899999632 23444444333
No 25
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=33.01 E-value=36 Score=31.03 Aligned_cols=21 Identities=24% Similarity=0.104 Sum_probs=17.7
Q ss_pred cccceeccCCCCCeeeEEEee
Q 017500 296 SVKHRVVASQVGPRVSVPCFF 316 (370)
Q Consensus 296 S~~HRV~~~~~~~R~Si~~F~ 316 (370)
+..|+|.+++..+|+.+.+=+
T Consensus 155 ~~~H~v~N~g~~~RIhLv~D~ 175 (290)
T 1e5r_A 155 ATVHSAVNFSEISRQSLCVDF 175 (290)
T ss_dssp TSCEEEEESSSSCCCEEEEEE
T ss_pred CCeeEEEcCCCCCeEEEEEEe
Confidence 358999999999999998755
No 26
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=32.63 E-value=45 Score=29.69 Aligned_cols=52 Identities=13% Similarity=0.082 Sum_probs=37.9
Q ss_pred CCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHh
Q 017500 64 TNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFN 121 (370)
Q Consensus 64 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF 121 (370)
-.++|+-|||+... ..+..++|.+++.++|+..+.+-.++.+ +..+.++.|=
T Consensus 14 ~Gaei~gvdl~~~l---~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 14 IGAQISGADLTRPL---SDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp SCEEEESCCSSSCC---CHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred ceEEEECCCcCccC---CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 45578888998743 2456889999999999999998887664 3444555553
No 27
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=30.83 E-value=47 Score=21.60 Aligned_cols=24 Identities=8% Similarity=0.241 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHcCCChhhh
Q 017500 189 NVTKLAETLFELLSLALGLKAEHL 212 (370)
Q Consensus 189 ~~~~la~~ll~~la~~Lgl~~~~~ 212 (370)
+-++|+..|.+++++.||.+++++
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~v 41 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQAI 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGC
T ss_pred HHHHHHHHHHHHHHHHhCcCcccE
Confidence 346889999999999999998644
No 28
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=30.08 E-value=24 Score=31.79 Aligned_cols=48 Identities=15% Similarity=0.068 Sum_probs=34.1
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCH--HHHHHHHHHH
Q 017500 67 QVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPL--NVLEEMIEGI 117 (370)
Q Consensus 67 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~--~l~~~~~~~~ 117 (370)
.||++++... ...++++.+.+++++.-.+.+.|||+=. +.+++++..+
T Consensus 179 ~v~v~~y~~~---g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~ 228 (274)
T 2v9l_A 179 GVGILPWMVP---GTDAIGQATAQEMQKHSLVLWPFHGVFGSGPTLDETFGLI 228 (274)
T ss_dssp CEEECCCCCS---SSHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred ceeEecCCCC---CCHHHHHHHHHHHccCCEEEEcCCCceEecCCHHHHHHHH
Confidence 5999988654 3457888999999988889999999532 2344444433
No 29
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=28.60 E-value=35 Score=29.09 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=32.8
Q ss_pred CCcceeeCCCCCCCChHHHHHHHHHHHHHcc---eEEEecCCCCH--HHHHHHHHHH
Q 017500 66 FQVPVIDLDGVRGNNLEEIVDQVRAAAETWG---FFQVVNHGIPL--NVLEEMIEGI 117 (370)
Q Consensus 66 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~G---FF~v~nHGi~~--~l~~~~~~~~ 117 (370)
..||+++.. . +.+++++.+.+++.+.+ .+.+.|||+=. +.+++++..+
T Consensus 138 ~~vp~~~~~-~---g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~ 190 (208)
T 2irp_A 138 IKIPIFPNE-Q---NIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHT 190 (208)
T ss_dssp CEEEEECCC-S---CHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHH
T ss_pred cceeeecCC-C---CHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHH
Confidence 368998874 2 45678889999998875 78889999532 2344444433
No 30
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=28.32 E-value=58 Score=29.28 Aligned_cols=54 Identities=9% Similarity=-0.039 Sum_probs=39.4
Q ss_pred CCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCC-CCHHHHHHHHHHHHHHhcC
Q 017500 64 TNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHG-IPLNVLEEMIEGISKFNEL 123 (370)
Q Consensus 64 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHG-i~~~l~~~~~~~~~~fF~l 123 (370)
-.++|+-|||+... ..+..++|.+++.++|+..+.+-. ++. ++..+.++.|=.+
T Consensus 24 ~Gaei~gvdl~~~l---~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 24 IGAEIRGVKLSPDL---DAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp SCEEEESCCCCTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred cceEEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 35568888998743 245688999999999999999887 775 4555666666443
No 31
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=27.96 E-value=64 Score=29.31 Aligned_cols=54 Identities=17% Similarity=0.089 Sum_probs=39.7
Q ss_pred CCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecC-CCCHHHHHHHHHHHHHHhcC
Q 017500 64 TNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNH-GIPLNVLEEMIEGISKFNEL 123 (370)
Q Consensus 64 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nH-Gi~~~l~~~~~~~~~~fF~l 123 (370)
-.++|+=|||+... ..+..++|.+|+.++|...+.|- .++.+ +..+.++.|=.+
T Consensus 18 iGaei~gvdl~~~L---~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 18 IGARVDGVRLGGDL---DDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp SCEEEESCCCSTTC---CHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ccceEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 45678888998432 24678899999999999999998 78764 445566666444
No 32
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=26.51 E-value=66 Score=21.13 Aligned_cols=23 Identities=30% Similarity=0.294 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHcCCChhhh
Q 017500 190 VTKLAETLFELLSLALGLKAEHL 212 (370)
Q Consensus 190 ~~~la~~ll~~la~~Lgl~~~~~ 212 (370)
-++|+..|.+++++.||.+++++
T Consensus 17 k~~l~~~lt~~l~~~lg~~~~~v 39 (64)
T 3abf_A 17 KRELVRRLTEMASRLLGEPYEEV 39 (64)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGE
T ss_pred HHHHHHHHHHHHHHHhCCCcccE
Confidence 46788999999999999998754
No 33
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=26.19 E-value=55 Score=29.27 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=39.1
Q ss_pred CCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHHHHhc
Q 017500 64 TNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGISKFNE 122 (370)
Q Consensus 64 ~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~fF~ 122 (370)
-+++|.=|||+... ..+..++|.+|+.++|...+.|-.++.+ +..+.++.|=.
T Consensus 12 ~Gaei~gvdl~~~l---~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 12 LGAQISGVDISRDI---SAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp SCEEEESCCTTSCC---CHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred eeEEEeCCCccccC---CHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 45678889998743 2467789999999999999999888764 44455665543
No 34
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.97 E-value=25 Score=24.88 Aligned_cols=38 Identities=18% Similarity=0.158 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhhh
Q 017500 178 VCRDAAREYIKNVTKLAETLFELLSLALGLKAEHLLEI 215 (370)
Q Consensus 178 ~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~~~~~ 215 (370)
+-+..++.|+..-.+-...-+..||+.+||+.+.+...
T Consensus 15 ~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVW 52 (71)
T 2da7_A 15 DHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEW 52 (71)
T ss_dssp HHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHH
Confidence 35778999999988888888999999999998866543
No 35
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=25.47 E-value=20 Score=26.61 Aligned_cols=18 Identities=39% Similarity=0.473 Sum_probs=14.6
Q ss_pred hhhhcCCeeccccceecc
Q 017500 286 LQIISNDKFKSVKHRVVA 303 (370)
Q Consensus 286 Le~~SnG~~kS~~HRV~~ 303 (370)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 456799999999987753
No 36
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=24.88 E-value=89 Score=26.60 Aligned_cols=43 Identities=12% Similarity=0.061 Sum_probs=32.6
Q ss_pred EEEEeccchhhhcCCee----ccccceeccCCCCCeeeEEE-eecCCC
Q 017500 278 LVVNIGDFLQIISNDKF----KSVKHRVVASQVGPRVSVPC-FFMGHN 320 (370)
Q Consensus 278 lvVnvGD~Le~~SnG~~----kS~~HRV~~~~~~~R~Si~~-F~~P~~ 320 (370)
..+.||+.-..|..|.. -|-+|.|.+.+++.|+-+.+ |.+|+.
T Consensus 139 ~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl 186 (197)
T 3rcq_A 139 CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPEL 186 (197)
T ss_dssp EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTS
T ss_pred cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCC
Confidence 34567887788888864 46789999998889987765 677765
No 37
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=24.84 E-value=69 Score=20.80 Aligned_cols=23 Identities=17% Similarity=0.166 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 017500 189 NVTKLAETLFELLSLALGLKAEH 211 (370)
Q Consensus 189 ~~~~la~~ll~~la~~Lgl~~~~ 211 (370)
+-++|+..|.+++.+.||++++.
T Consensus 15 ~k~~l~~~i~~~l~~~lg~p~~~ 37 (62)
T 1otf_A 15 QKETLIRQVSEAMANSLDAPLER 37 (62)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 44688999999999999999764
No 38
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=24.83 E-value=70 Score=20.72 Aligned_cols=23 Identities=22% Similarity=0.255 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHcCCChhh
Q 017500 189 NVTKLAETLFELLSLALGLKAEH 211 (370)
Q Consensus 189 ~~~~la~~ll~~la~~Lgl~~~~ 211 (370)
+-++|+..|.+++++.||++++.
T Consensus 15 qk~~l~~~i~~~l~~~lg~~~~~ 37 (61)
T 2opa_A 15 QKRNLVEKVTEAVKETTGASEEK 37 (61)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCcCe
Confidence 44688999999999999999764
No 39
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=24.65 E-value=51 Score=18.46 Aligned_cols=13 Identities=23% Similarity=0.276 Sum_probs=10.4
Q ss_pred eEEEeCCeEEEec
Q 017500 260 LQVFHDNQWVGVQ 272 (370)
Q Consensus 260 LqV~~~g~W~~V~ 272 (370)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5788999999753
No 40
>2nys_A AGR_C_3712P; SSPB, stringent starvation protein B, NESG, ATR88, structural genomics, PSI-2, protein structure initiative; 2.70A {Agrobacterium tumefaciens str} SCOP: b.136.1.2
Probab=24.11 E-value=70 Score=26.67 Aligned_cols=61 Identities=15% Similarity=0.221 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh-h-hh-hcCCcce----eeccccCCCCCCCCCCCCCCCcccCCceEEEecCCCCCe
Q 017500 188 KNVTKLAETLFELLSLALGLKAEH-L-LE-IGCPKEY----ILLCQYYPPCPQPDLTLGATGHSDPSFLTILLQDQIGGL 260 (370)
Q Consensus 188 ~~~~~la~~ll~~la~~Lgl~~~~-~-~~-~~~~~~~----~l~~~yYP~~~~~~~~~g~~~HtD~~~lTlL~qd~~~GL 260 (370)
++|+.+.+++|.-++..=||+.+. | -. .....+. .++ ..||-. +||++|.+--+|
T Consensus 14 ~AlrgVvr~vL~~va~~g~LPg~HHFyITF~T~~pGV~i~~~L~-~~YP~E-----------------MTIVLQhQF~dL 75 (176)
T 2nys_A 14 DALRGVIRKVLGEVAATGRLPGDHHFFITFLTGAPGVRISQHLK-SKYAEQ-----------------MTIVIQHQFWDM 75 (176)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCTTCCEEEEEESSSTTCBCCHHHH-HHSSSE-----------------EEEEESSSCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccEEEEEEecCCCCccCCHHHH-hhCCCc-----------------eEEEEEeeecCc
Confidence 578889999999999866687552 2 11 1111111 122 456643 999999998899
Q ss_pred EEEeCC
Q 017500 261 QVFHDN 266 (370)
Q Consensus 261 qV~~~g 266 (370)
+|..+|
T Consensus 76 ~V~e~~ 81 (176)
T 2nys_A 76 KVTETG 81 (176)
T ss_dssp EECSSE
T ss_pred EEecCc
Confidence 997665
No 41
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=23.98 E-value=40 Score=30.32 Aligned_cols=49 Identities=16% Similarity=0.173 Sum_probs=34.0
Q ss_pred CcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCH--HHHHHHHHHH
Q 017500 67 QVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPL--NVLEEMIEGI 117 (370)
Q Consensus 67 ~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~--~l~~~~~~~~ 117 (370)
.||++|+..+. ...++.+.|.+++.+.-.+.|.|||+=. +.+++++..+
T Consensus 156 ~v~~~~y~~~~--~~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~ 206 (273)
T 3ocr_A 156 RVAYHGYEGIA--LDLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQL 206 (273)
T ss_dssp TEEEECCCCSS--CCHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred CEEEECCCCCC--CCHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHH
Confidence 58898887653 1456788898999998899999999532 2344444433
No 42
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=21.16 E-value=1.6e+02 Score=25.23 Aligned_cols=52 Identities=17% Similarity=0.406 Sum_probs=35.4
Q ss_pred CCCCccccCCCCCcchhhccCCCCCCcceeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCC
Q 017500 42 VNIPRIFIRPPEELVEELTSHQTNFQVPVIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHG 104 (370)
Q Consensus 42 ~~vP~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHG 104 (370)
..||..-.|...+... +.++.-.|.||.+.+. .+.+..|...-|+|-++|.-
T Consensus 189 LNIPG~qTwaGkni~~----SeSELimPSId~kgls-------~~dvLaaIe~kGYyEI~nPt 240 (268)
T 3pnt_A 189 LNIPGCQTWSGKHIEN----SESELIFPSISVKDLK-------SKAVLAEIDAKGYFEIIDPT 240 (268)
T ss_dssp TCCTTTCCCCTTCGGG----CCCCEEECEEECTTCC-------HHHHHHHHHHHSCCEEESCE
T ss_pred cCCCcccccccccccc----cccceeecccccCCCc-------HHHHHHHHhhcCeEEecCCe
Confidence 3566666665554432 3345557999999885 23566777889999999864
No 43
>2do1_A Nuclear protein HCC-1; SAP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.140.2.1
Probab=21.05 E-value=1.2e+02 Score=20.07 Aligned_cols=39 Identities=10% Similarity=0.285 Sum_probs=27.3
Q ss_pred eeeCCCCCCCChHHHHHHHHHHHHHcceEEEecCCCCHHHHHHHHHHHH
Q 017500 70 VIDLDGVRGNNLEEIVDQVRAAAETWGFFQVVNHGIPLNVLEEMIEGIS 118 (370)
Q Consensus 70 vIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~ 118 (370)
++|++.+ .+.+|.+.|+.+| +.--|.-.++++++.+...
T Consensus 7 ~~~l~kl-------kV~eLK~~L~~rG---L~~~G~KaeLieRL~~~l~ 45 (55)
T 2do1_A 7 GVELHKL-------KLAELKQECLARG---LETKGIKQDLIHRLQAYLE 45 (55)
T ss_dssp CCCTTTS-------CHHHHHHHHHHHT---CCCCSCHHHHHHHHHHHHH
T ss_pred ccCHHHC-------cHHHHHHHHHHcC---CCCCCcHHHHHHHHHHHHh
Confidence 3556655 2678999999999 4456777788888776543
No 44
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=20.08 E-value=98 Score=20.55 Aligned_cols=24 Identities=29% Similarity=0.325 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCChhh
Q 017500 188 KNVTKLAETLFELLSLALGLKAEH 211 (370)
Q Consensus 188 ~~~~~la~~ll~~la~~Lgl~~~~ 211 (370)
+.-++|+..|.+++.+.||++++.
T Consensus 14 eqk~~L~~~it~~~~~~lg~p~~~ 37 (65)
T 3ry0_A 14 QEVAALGEALTAAAHETLGTPVEA 37 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688999999999999999764
Done!