BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017503
(370 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 232 bits (591), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 126/304 (41%), Positives = 187/304 (61%), Gaps = 5/304 (1%)
Query: 20 EAPQGVDGEL-LRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPL 78
+ P D E+ L + FS EL+ A+D+F N +GRGGFG VYKG L +G +AVK L
Sbjct: 11 DVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRL 70
Query: 79 SAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 137
E QG +F TE+ +S H NL+ L G C+ T R+LVY Y+ N S+ L
Sbjct: 71 KEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 130
Query: 138 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK 197
++ L+W KR I +G A+GLA+LH+ P I+HRD+KA+NILLD+EF +GDFGLAK
Sbjct: 131 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 190
Query: 198 LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK--AMWG 255
L H+ + GT G++APEY+ G+ + K DV+ +GV++LE+I+G+ + +
Sbjct: 191 LMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 250
Query: 256 QMNKFLLEWAWQLHQEEKPLELVDPEL-GEYPPNEIIRYMKVAFFCTQAAASRRPQMNQV 314
+ LL+W L +E+K LVD +L G Y E+ + ++VA CTQ++ RP+M++V
Sbjct: 251 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Query: 315 IKML 318
++ML
Sbjct: 311 VRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 230 bits (587), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 186/304 (61%), Gaps = 5/304 (1%)
Query: 20 EAPQGVDGEL-LRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPL 78
+ P D E+ L + FS EL+ A+D+F N +GRGGFG VYKG L +G +AVK L
Sbjct: 3 DVPAEEDPEVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRL 62
Query: 79 SAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGAT 137
E QG +F TE+ +S H NL+ L G C+ T R+LVY Y+ N S+ L
Sbjct: 63 KEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERP 122
Query: 138 KANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK 197
++ L+W KR I +G A+GLA+LH+ P I+HRD+KA+NILLD+EF +GDFGLAK
Sbjct: 123 ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182
Query: 198 LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGK--AMWG 255
L H+ + G G++APEY+ G+ + K DV+ +GV++LE+I+G+ + +
Sbjct: 183 LMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 242
Query: 256 QMNKFLLEWAWQLHQEEKPLELVDPEL-GEYPPNEIIRYMKVAFFCTQAAASRRPQMNQV 314
+ LL+W L +E+K LVD +L G Y E+ + ++VA CTQ++ RP+M++V
Sbjct: 243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Query: 315 IKML 318
++ML
Sbjct: 303 VRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 176/290 (60%), Gaps = 5/290 (1%)
Query: 39 TELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSN 98
+L AT++F IG G FG VYKG L +G ++A+K + ES QG+ EF TEI TLS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP+LV LIG C + IL+Y+Y+EN +L R L G+ + ++WE+R +IC+G A+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYL 217
L +LH I+HRD+K+ NILLD+ F PKI DFG++K + + TH+ + GT GY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
PEY + G+LT K+DVYSFGV++ E++ R++ + L EWA + H + ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 278 VDPELGE-YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 326
VDP L + P + ++ A C ++ RP M V+ L +RL E
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 208 bits (530), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 175/290 (60%), Gaps = 5/290 (1%)
Query: 39 TELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSN 98
+L AT++F IG G FG VYKG L +G ++A+K + ES QG+ EF TEI TLS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP+LV LIG C + IL+Y+Y+EN +L R L G+ + ++WE+R +IC+G A+G
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYL 217
L +LH I+HRD+K+ NILLD+ F PKI DFG++K + TH+ + GT GY+
Sbjct: 152 LHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYI 208
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
PEY + G+LT K+DVYSFGV++ E++ R++ + L EWA + H + ++
Sbjct: 209 DPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268
Query: 278 VDPELGE-YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 326
VDP L + P + ++ A C ++ RP M V+ L +RL E
Sbjct: 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 162/297 (54%), Gaps = 24/297 (8%)
Query: 36 FSYTELRSATDDFHL------SNKIGRGGFGTVYKGTLTNGRRIAVKPLSA----ESKQG 85
FS+ EL++ T++F NK+G GGFG VYKG + N +AVK L+A +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLN 144
++F EI ++ +H NLVEL+G G LVY Y+ N SL DR L L+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 131
Query: 145 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPD 201
W R I G A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ + +RI GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L
Sbjct: 189 TV--MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLL 244
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+E+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 161/297 (54%), Gaps = 24/297 (8%)
Query: 36 FSYTELRSATDDFHL------SNKIGRGGFGTVYKGTLTNGRRIAVKPLSA----ESKQG 85
FS+ EL++ T++F NK+G GGFG VYKG + N +AVK L+A +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 73
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLN 144
++F EI ++ +H NLVEL+G G LVY Y+ N SL DR L L+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 131
Query: 145 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPD 201
W R I G A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F
Sbjct: 132 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 188
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ + RI GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L
Sbjct: 189 TV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLL 244
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+E+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 161/297 (54%), Gaps = 24/297 (8%)
Query: 36 FSYTELRSATDDFHL------SNKIGRGGFGTVYKGTLTNGRRIAVKPLSA----ESKQG 85
FS+ EL++ T++F NK+G GGFG VYKG + N +AVK L+A +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLN 144
++F EI ++ +H NLVEL+G G LVY Y+ N SL DR L L+
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDR--LSCLDGTPPLS 125
Query: 145 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPD 201
W R I G A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F
Sbjct: 126 WHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 182
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ + RI GTT Y+APE L G++T K+D+YSFGV++LEII+G + + L
Sbjct: 183 XV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLL 238
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+E+ + +D ++ + + VA C ++RP + +V ++L
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 156/297 (52%), Gaps = 24/297 (8%)
Query: 36 FSYTELRSATDDFHL------SNKIGRGGFGTVYKGTLTNGRRIAVKPLSA----ESKQG 85
FS+ EL++ T++F NK G GGFG VYKG + N +AVK L+A +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLN 144
++F EI + +H NLVEL+G G LVY Y N SL DR L L+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDR--LSCLDGTPPLS 122
Query: 145 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPD 201
W R I G A G+ FLHE H +HRDIK++NILLD+ F KI DFGLA+ F
Sbjct: 123 WHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ 179
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ +RI GTT Y APE L G++T K+D+YSFGV++LEII+G + + L
Sbjct: 180 XVX--XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHR-EPQLLL 235
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+E+ + +D + + + VA C ++RP + +V ++L
Sbjct: 236 DIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 124 bits (311), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 120/214 (56%), Gaps = 10/214 (4%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNL 104
D ++ KIG G FGTV++ +G +AVK L + + V EF+ E+ + +RHPN+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
V +G Q +V EY+ SL R LL + A +L+ +R + +AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG 224
P IVHRD+K+ N+L+D+++ K+ DFGL++L + AGT ++APE +
Sbjct: 156 R-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVLRD 213
Query: 225 GQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
K+DVYSFGV++ E+ + + WG +N
Sbjct: 214 EPSNEKSDVYSFGVILWELATLQQP----WGNLN 243
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 124/215 (57%), Gaps = 12/215 (5%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNL 104
D ++ KIG G FGTV++ +G +AVK L + + V EF+ E+ + +RHPN+
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNI 96
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
V +G Q +V EY+ SL R LL + A +L+ +R + +AKG+ +LH
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTGYLAPEYVL 223
P IVHR++K+ N+L+D+++ K+ DFGL++L T ++++ AGT ++APE +
Sbjct: 156 R-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLR 212
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
K+DVYSFGV++ E+ + + WG +N
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP----WGNLN 243
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 34/276 (12%)
Query: 54 IGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ 113
+GRG FG V K + +A+K + +ES++ + FI E+ LS V HPN+V+L G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 114 GTRRILVYEYVENNSLDRVLLGATK-----ANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
LV EY E SL VL GA A ++W C+ ++G+A+LH
Sbjct: 73 PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 124
Query: 169 HIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
++HRD+K N+LL KI DFG A D TH+T G+ ++APE G
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNY 180
Query: 228 TMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPP 287
+ K DV+S+G+++ E+I+ R + G + + W +H + P L + P
Sbjct: 181 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLP 230
Query: 288 NEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
I M C S+RP M +++K++T +R
Sbjct: 231 KPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLMR 263
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 137/276 (49%), Gaps = 34/276 (12%)
Query: 54 IGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ 113
+GRG FG V K + +A+K + +ES++ + FI E+ LS V HPN+V+L G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 114 GTRRILVYEYVENNSLDRVLLGATK-----ANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
LV EY E SL VL GA A ++W C+ ++G+A+LH
Sbjct: 74 PV--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSMQPK 125
Query: 169 HIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
++HRD+K N+LL KI DFG A D TH+T G+ ++APE G
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTAC---DIQTHMTNN-KGSAAWMAPEVFEGSNY 181
Query: 228 TMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPP 287
+ K DV+S+G+++ E+I+ R + G + + W +H + P L + P
Sbjct: 182 SEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM----WAVHNGTR------PPLIKNLP 231
Query: 288 NEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
I M C S+RP M +++K++T +R
Sbjct: 232 KPIESLMTR---CWSKDPSQRPSMEEIVKIMTHLMR 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 115/215 (53%), Gaps = 27/215 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFI----TEIMTLSNVRHP 102
+ L IG GGFG VY+ G +AVK + + + + I E + ++HP
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA-TKANIKLNWEKRSDICVGIAKGLAF 161
N++ L G C++ LV E+ L+RVL G +I +NW V IA+G+ +
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--------KIGDFGLAKLFPDNITHITTRI--A 211
LH+E + I+HRD+K+SNIL+ Q+ KI DFGLA+ + H TT++ A
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HRTTKMSAA 175
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
G ++APE + + +DV+S+GVL+ E+++G
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
E + L ++G G FG V+ G ++AVK L + F+ E + +
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 73
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+H LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+
Sbjct: 74 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 130
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN + AP
Sbjct: 131 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 187
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIIS 245
E + G T+K+DV+SFG+L+ EI++
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
E + L ++G G FG V+ G ++AVK L + F+ E + +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 71
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+H LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 128
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN + AP
Sbjct: 129 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIIS 245
E + G T+K+DV+SFG+L+ EI++
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
E + L ++G G FG V+ G ++AVK L + F+ E + +
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 74
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+H LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+
Sbjct: 75 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 131
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN + AP
Sbjct: 132 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIIS 245
E + G T+K+DV+SFG+L+ EI++
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
E + L ++G G FG V+ G ++AVK L + F+ E + +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+H LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN + AP
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIIS 245
E + G T+K+DV+SFG+L+ EI++
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 68
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 69 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 125
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 126 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 72
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 73 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 130 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 186
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 67
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 68 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 124
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 125 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVT 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 63
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 64 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 120
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 121 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVT 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 7/206 (3%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
E + L ++G G FG V+ G ++AVK L + F+ E + +
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQL 67
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+H LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+
Sbjct: 68 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN + AP
Sbjct: 125 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIIS 245
E + G T+K+DV+SFG+L+ EI++
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVT 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 62
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTL 96
E + L ++G G FG V+ G ++AVK L KQG F+ E +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLM 62
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++H LV L Q I+ EY+EN SL L T + IKL K D+ IA
Sbjct: 63 KQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIA 119
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+G+AF+ E + +HRD++A+NIL+ + KI DFGLA+L DN +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
APE + G T+K+DV+SFG+L+ EI++
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 13/203 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE---FITEIMTLSNVRHP 102
+ L ++G G FG V+ G ++AVK L KQG F+ E + ++H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQ 63
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
LV L Q I+ EY+EN SL L T + IKL K D+ IA+G+AF+
Sbjct: 64 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFI 120
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
E + +HRD++A+NIL+ + KI DFGLA+L DN + APE +
Sbjct: 121 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAI 177
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
G T+K+DV+SFG+L+ EI++
Sbjct: 178 NYGTFTIKSDVWSFGILLTEIVT 200
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 104/200 (52%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L ++G G FG V+ G ++AVK L + F+ E + ++H LV
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 67
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L Q I+ EY+EN SL L T + IKL K D+ IA+G+AF+ E
Sbjct: 68 RLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HR+++A+NIL+ + KI DFGLA+L DN + APE + G
Sbjct: 125 ---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 181
Query: 226 QLTMKADVYSFGVLVLEIIS 245
T+K+DV+SFG+L+ EI++
Sbjct: 182 TFTIKSDVWSFGILLTEIVT 201
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 66
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 67 QLYAVVSEEPIXI-VTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERM 123
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 124 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 180
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 181 RFTIKSDVWSFGILLTELTT 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 69
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 70 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP--QLVDMAAQIASGMAYVERM 126
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 127 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 183
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 184 RFTIKSDVWSFGILLTELTT 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVERM 130
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 131 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYG 187
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 188 RFTIKSDVWSFGILLTELTT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 73
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 74 QLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQIASGMAYVERM 130
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 131 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 187
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 188 RFTIKSDVWSFGILLTELTT 207
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L ++G G G V+ G ++AVK L + F+ E + ++H LV
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L Q I+ EY+EN SL L T + IKL K D+ IA+G+AF+ E
Sbjct: 72 RLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++A+NIL+ + KI DFGLA+L D + APE + G
Sbjct: 129 ---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG 185
Query: 226 QLTMKADVYSFGVLVLEIIS 245
T+K+DV+SFG+L+ EI++
Sbjct: 186 TFTIKSDVWSFGILLTEIVT 205
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM 299
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 357 RFTIKSDVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 243 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM 299
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 357 RFTIKSDVWSFGILLTELTT 376
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/282 (30%), Positives = 142/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 152 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 206
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 207 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 263
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---L 315
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
+ P EY P+ + M C A RP ++++ ++
Sbjct: 316 LQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 351
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 148
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 205
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 259
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 260 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I++ EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 98 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 152
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 153 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 209
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 263
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 264 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 297
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 94 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 148
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 149 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWM 205
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 259
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 260 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 293
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 103/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L + F+ E + +RH LV
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLV 325
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 326 QLY-AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM 382
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 383 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 439
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 440 RFTIKSDVWSFGILLTELTT 459
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 147
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 258
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 259 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 145
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 146 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 202
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 256
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 257 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 290
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 242
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G T ++L + D+ IA G+A++
Sbjct: 243 QLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM 299
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 300 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 356
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 357 RFTIKSDVWSFGILLTELTT 376
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 102/200 (51%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I++ EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAVVSEEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 147
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD---NITHITTRIAGTTGYL 217
FL + VHRD+ A N +LD++F K+ DFGLA+ D + H T ++
Sbjct: 148 FLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWM 204
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 258
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + M C A RP ++++ ++
Sbjct: 259 -----PEYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 292
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 65
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 66 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 122
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 123 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 179
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 180 RFTIKSDVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 67
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 68 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 124
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 125 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 181
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 182 RFTIKSDVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 111 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 165
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 166 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 222
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 276
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 277 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 112 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 166
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 167 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 223
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 277
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 278 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 146
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 203
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 257
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 258 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 90 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 144
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 145 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 201
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 255
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 256 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 85 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 139
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 140 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 196
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---L 248
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
+ P EY P+ + +V C A RP ++++ ++
Sbjct: 249 LQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 92 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 146
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 147 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWM 203
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---L 255
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
+ P EY P+ + M C A RP ++++ ++
Sbjct: 256 LQP---EYCPDPLYEVM---LKCWHPKAEMRPSFSELVSRIS 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 147
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 258
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 259 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 141/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 93 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 147
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 148 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 204
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L+
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRRLLQ- 258
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
EY P+ + +V C A RP ++++ ++
Sbjct: 259 -----PEYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 88 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 142
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 143 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 199
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---L 251
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
+ P EY P+ + +V C A RP ++++ ++
Sbjct: 252 LQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 142/282 (50%), Gaps = 33/282 (11%)
Query: 49 HLSNKIGRGGFGTVYKGTL--TNGRRI--AVKPLSAESKQG-VREFITEIMTLSNVRHPN 103
H + IGRG FG VY GTL +G++I AVK L+ + G V +F+TE + + + HPN
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 104 LVELIGCCVQGT-RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLA 160
++ L+G C++ ++V Y+++ L + T N + I G +AKG+
Sbjct: 91 VLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMK 145
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN---ITHITTRIAGTTGYL 217
+L + VHRD+ A N +LD++F K+ DFGLA+ D H T ++
Sbjct: 146 YLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWM 202
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLEL 277
A E + + T K+DV+SFGVL+ E+++ G + +N F + L Q + L
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMT---RGAPPYPDVNTF--DITVYLLQGRR---L 254
Query: 278 VDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
+ P EY P+ + +V C A RP ++++ ++
Sbjct: 255 LQP---EYCPDPL---YEVMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ L L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLV 76
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ L L G ++L + D+ IA G+A++
Sbjct: 77 QLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERM 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGLA+L DN + APE L G
Sbjct: 134 ---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG 190
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 191 RFTIKSDVWSFGILLTELTT 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G+G FG V+ GT R+A+K L F+ E + +RH LV
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLV 243
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L V +V EY+ SL L G ++L + D+ IA G+A++
Sbjct: 244 QLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM 300
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD++A+NIL+ + K+ DFGL +L DN + APE L G
Sbjct: 301 ---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYG 357
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ T+K+DV+SFG+L+ E+ +
Sbjct: 358 RFTIKSDVWSFGILLTELTT 377
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 139/279 (49%), Gaps = 29/279 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRR---IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V G L G+R +A+K L S +++ R+F++E + HPN++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + T +++ E++EN SLD L + + + + + GIA G+ +L +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM--- 154
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAPEYVLG 224
+ VHRD+ A NIL++ K+ DFGL++ D+ + T+ + G + APE +
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 225 GQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGE 284
+ T +DV+S+G+++ E++S + W N+ ++ Q ++ P++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS--YGERPYWDMTNQDVINAIEQDYRLPPPMDC------- 265
Query: 285 YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P+ + + M C Q + RP+ Q++ L K IR
Sbjct: 266 --PSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKMIR 299
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 36/307 (11%)
Query: 33 VNHFSYTELRSATDDF---------HLSNKIGRGGFGTVYKGTL-TNGRR---IAVKPLS 79
V+ F++ + A +F + IG G FG V G L G+R +A+K L
Sbjct: 7 VDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLK 66
Query: 80 A-ESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK 138
A + + R+F++E + HPN++ L G + +++ EY+EN SLD L K
Sbjct: 67 AGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL---RK 123
Query: 139 ANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL 198
+ + + + GI G+ +L + VHRD+ A NIL++ K+ DFG++++
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 199 FPDNITHITTRIAGTTG--YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
D+ T G + APE + + T +DV+S+G+++ E++S + W
Sbjct: 181 LEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS--YGERPYWDM 238
Query: 257 MNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIK 316
N+ +++ + ++ P++ I ++ C Q S RP+ Q++
Sbjct: 239 SNQDVIKAIEEGYRLPPPMDCP------------IALHQLMLDCWQKERSDRPKFGQIVN 286
Query: 317 MLTKNIR 323
ML K IR
Sbjct: 287 MLDKLIR 293
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 119/217 (54%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 1 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 60
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L + K +K DI
Sbjct: 61 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQ 116
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 117 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V G L G+R +A+K L A + + R+F++E + HPN++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + +++ EY+EN SLD L K + + + + GI G+ +L +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--- 135
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFG++++ D+ T G + APE + +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 196 FTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPPPMDCP-------- 245
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
I ++ C Q S RP+ Q++ ML K IR
Sbjct: 246 ----IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 278
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 116/217 (53%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R A DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 13 RDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + +V ++ E +SL L + K +K DI
Sbjct: 73 VLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQ 128
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 129 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 13/215 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L ++G G FG V+ G N ++AVK L + V+ F+ E + ++H LV
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 71
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L + ++ EY+ SL L + L K D IA+G+A++ +
Sbjct: 72 RLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK 129
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++A+N+L+ + KI DFGLA++ DN + APE + G
Sbjct: 130 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 186
Query: 226 QLTMKADVYSFGVLVLEIIS-------GRNSGKAM 253
T+K+DV+SFG+L+ EI++ GR + M
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVM 221
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 115/211 (54%), Gaps = 12/211 (5%)
Query: 43 SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGV-REFITEIMTLSNVR 100
S++ F K+G G + TVYKG T G +A+K + +S++G I EI + ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDICVGIAK 157
H N+V L + LV+E+++N+ +D +G T ++LN K + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKY--FQWQLLQ 119
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
GLAF HE I+HRD+K N+L+++ K+GDFGLA+ F + ++ + T Y
Sbjct: 120 GLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWYR 175
Query: 218 APEYVLGGQ-LTMKADVYSFGVLVLEIISGR 247
AP+ ++G + + D++S G ++ E+I+G+
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLT-NGRR---IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V G L G+R +A+K L +++ R+F+ E + HPN++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GI+ G+ +L +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM--- 143
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + APE + +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 204 FTSASDVWSYGIVMWEVVS--YGERPYWEMTNQDVIKAVEEGYRLPSPMDC--------- 252
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ ++++ ML K IR
Sbjct: 253 PAALYQLM---LDCWQKERNSRPKFDEIVNMLDKLIR 286
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 146/300 (48%), Gaps = 30/300 (10%)
Query: 31 RNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLT-NGRR---IAVKPLS-AESKQG 85
R V+ F+ EL ++ + IG G FG V G L G+R +A+K L +++
Sbjct: 31 RAVHQFA-KELDASC--IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQ 87
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNW 145
R+F+ E + HPN+V L G +G ++V E++EN +LD L K + +
Sbjct: 88 RRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTV 144
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
+ + GIA G+ +L + VHRD+ A NIL++ K+ DFGL+++ D+
Sbjct: 145 IQLVGMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA 201
Query: 206 ITTRIAGT--TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLE 263
+ T G + APE + + T +DV+S+G+++ E++S + W N+ +++
Sbjct: 202 VYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIK 259
Query: 264 WAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
+ ++ P++ P + + M C Q + RP+ Q++ +L K IR
Sbjct: 260 AIEEGYRLPAPMDC---------PAGLHQLM---LDCWQKERAERPKFEQIVGILDKMIR 307
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 133/277 (48%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V G L G+R +A+K L A + + R+F++E + HPN++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + +++ EY+EN SLD L K + + + + GI G+ +L +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--- 129
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFG++++ D+ T G + APE + +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 190 FTSASDVWSYGIVMWEVMS--YGERPYWDMSNQDVIKAIEEGYRLPPPMDCP-------- 239
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
I ++ C Q S RP+ Q++ ML K IR
Sbjct: 240 ----IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIR 272
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 118/217 (54%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 13 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 72
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L + K +K DI
Sbjct: 73 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQ 128
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 129 TARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV+E++E+ L R G A L +C+ + +G+A+L E V
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV- 127
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
+HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 128 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 186 SKSDVWSFGVLMWEVFS 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV+E++E+ L R G A L +C+ + +G+A+L E V
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV- 122
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
+HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 123 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 181 SKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV+E++E+ L R G A L +C+ + +G+A+L E V
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV- 124
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
+HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 125 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 183 SKSDVWSFGVLMWEVFS 199
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 112/228 (49%), Gaps = 28/228 (12%)
Query: 50 LSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPN 103
L ++G G FG V+ N +AVK L S ++F E L+N++H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 104 LVELIGCCVQGTRRILVYEYVENNSL---------DRVLLGATKANIKLNWEKRSDICVG 154
+V+ G CV+G I+V+EY+++ L D VL+ +L + I
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
IA G+ +L + H VHRD+ N L+ + KIGDFG+++ D + R+ G T
Sbjct: 137 IAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSR---DVYSTDYYRVGGHT 190
Query: 215 ----GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
++ PE ++ + T ++DV+S GV++ EI + GK W Q++
Sbjct: 191 MLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT---YGKQPWYQLS 235
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV+E++E+ L R G A L +C+ + +G+A+L E
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEE---A 122
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
++HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 183 SKSDVWSFGVLMWEVFS 199
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 99/197 (50%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV+E++E+ L R G A L +C+ + +G+A+L E V
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV- 144
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
+HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 145 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 203 SKSDVWSFGVLMWEVFS 219
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G G FG V+ T ++AVK + S V F+ E + ++H LV
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 73
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I+ E++ SL L + L K D IA+G+AF+ +
Sbjct: 74 KLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 130
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++A+NIL+ KI DFGLA++ DN + APE + G
Sbjct: 131 ---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 187
Query: 226 QLTMKADVYSFGVLVLEIIS 245
T+K+DV+SFG+L++EI++
Sbjct: 188 SFTIKSDVWSFGILLMEIVT 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 138/279 (49%), Gaps = 29/279 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRR---IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V G L G+R +A+K L S +++ R+F++E + HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + T +++ E++EN SLD L + + + + + GIA G+ +L +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM--- 128
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAPEYVLG 224
+ VHR + A NIL++ K+ DFGL++ D+ + T+ + G + APE +
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 188
Query: 225 GQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGE 284
+ T +DV+S+G+++ E++S + W N+ ++ Q ++ P++
Sbjct: 189 RKFTSASDVWSYGIVMWEVMS--YGERPYWDMTNQDVINAIEQDYRLPPPMDC------- 239
Query: 285 YPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P+ + + M C Q + RP+ Q++ L K IR
Sbjct: 240 --PSALHQLM---LDCWQKDRNHRPKFGQIVNTLDKMIR 273
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 117/217 (53%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 85 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQ 140
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 141 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 117/217 (53%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 24 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 83
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 84 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQ 139
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 140 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 98/197 (49%), Gaps = 13/197 (6%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+IG G FG V+ G N ++A+K + E +FI E + + HP LV+L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 112 VQGTRRILVYEYVENNSLD---RVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ LV E++E+ L R G A L +C+ + +G+A+L E V
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEACV- 125
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
+HRD+ A N L+ + K+ DFG+ + D+ +T + +PE + +
Sbjct: 126 --IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 229 MKADVYSFGVLVLEIIS 245
K+DV+SFGVL+ E+ S
Sbjct: 184 SKSDVWSFGVLMWEVFS 200
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 27/286 (9%)
Query: 48 FHLSNKIGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHP 102
H+ IG G G V G L G+R +A+K L A +++ R+F++E + HP
Sbjct: 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHP 110
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N++ L G +G ++V EY+EN SLD L + + + + G+ G+ +L
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPE 220
+ VHRD+ A N+L+D K+ DFGL+++ D+ T G + APE
Sbjct: 168 SDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPE 224
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDP 280
+ + +DV+SFGV++ E+++ + W N+ ++ + ++ P+
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLA--YGERPYWNMTNRDVISSVEEGYRLPAPMGC--- 279
Query: 281 ELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 326
P+ + + M C ++RP+ +Q++ +L IR E
Sbjct: 280 ------PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 6/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G G FG V+ G N ++AVK L + V+ F+ E + ++H LV
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLV 70
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L + ++ E++ SL L + L K D IA+G+A++ +
Sbjct: 71 RLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK 128
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++A+N+L+ + KI DFGLA++ DN + APE + G
Sbjct: 129 ---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 185
Query: 226 QLTMKADVYSFGVLVLEIIS 245
T+K++V+SFG+L+ EI++
Sbjct: 186 CFTIKSNVWSFGILLYEIVT 205
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 39/293 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQG-------VREFITEIMT 95
A ++ +IG+GGFG V+KG L + + A+K L +G +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 210
A G+ ++ + P IVHRD+++ NI L E P K+ DFGL++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGL 186
Query: 211 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 267
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 7/200 (3%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G G FG V+ T ++AVK + S V F+ E + ++H LV
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 246
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I+ E++ SL L + L K D IA+G+AF+ +
Sbjct: 247 KLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 303
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++A+NIL+ KI DFGLA++ DN + APE + G
Sbjct: 304 ---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG 360
Query: 226 QLTMKADVYSFGVLVLEIIS 245
T+K+DV+SFG+L++EI++
Sbjct: 361 SFTIKSDVWSFGILLMEIVT 380
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%), Gaps = 27/285 (9%)
Query: 49 HLSNKIGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHPN 103
H+ IG G G V G L G+R +A+K L A +++ R+F++E + HPN
Sbjct: 52 HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPN 111
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ L G +G ++V EY+EN SLD L + + + + G+ G+ +L
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLS 168
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEY 221
+ VHRD+ A N+L+D K+ DFGL+++ D+ T G + APE
Sbjct: 169 DL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 222 VLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPE 281
+ + +DV+SFGV++ E+++ + W N+ ++ + ++ P+
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVLA--YGERPYWNMTNRDVISSVEEGYRLPAPMGC---- 279
Query: 282 LGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNE 326
P+ + + M C ++RP+ +Q++ +L IR E
Sbjct: 280 -----PHALHQLM---LDCWHKDRAQRPRFSQIVSVLDALIRSPE 316
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGLA++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 25/254 (9%)
Query: 24 GVDGELLRNVNHFSYTELRS-ATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVK 76
G+ G ++ N +FS + D L ++G G FG V+ N +AVK
Sbjct: 18 GLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVK 77
Query: 77 PLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-- 134
L S+ ++F E L+ ++H ++V G C +G ++V+EY+ + L+R L
Sbjct: 78 ALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH 137
Query: 135 ---------GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQE 185
G A L + + +A G+ +L H VHRD+ N L+ Q
Sbjct: 138 GPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQG 194
Query: 186 FNPKIGDFGLAK-LFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
KIGDFG+++ ++ + + R ++ PE +L + T ++DV+SFGV++ EI
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 245 SGRNSGKAMWGQMN 258
+ GK W Q++
Sbjct: 255 T---YGKQPWYQLS 265
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 17 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 76
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 77 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQ 132
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 133 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 18/217 (8%)
Query: 42 RSATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIM 94
R ++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+
Sbjct: 25 RDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 84
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L RH N++ +G + + +V ++ E +SL L K K DI
Sbjct: 85 VLRKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQ 140
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGT 213
A+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + +H +++G+
Sbjct: 141 TAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 214 TGYLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 10/213 (4%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L ++G G FG V+ GT ++A+K L + F+ E + ++H LV
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLV 67
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I V EY+ SL L +KL D+ +A G+A++
Sbjct: 68 QLYAVVSEEPIYI-VTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERM 124
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD++++NIL+ KI DFGLA+L DN + APE L G
Sbjct: 125 ---NYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYG 181
Query: 226 QLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+ T+K+DV+SFG+L+ E+++ G+ + MN
Sbjct: 182 RFTIKSDVWSFGILLTELVT---KGRVPYPGMN 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%), Gaps = 18/215 (8%)
Query: 44 ATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+ L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
RH N++ +G + + +V ++ E +SL L K K DI A
Sbjct: 64 RKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTA 119
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTG 215
+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 120 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 216 YLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%), Gaps = 18/215 (8%)
Query: 44 ATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+ L
Sbjct: 4 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 63
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
RH N++ +G + + +V ++ E +SL L K K DI A
Sbjct: 64 RKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTA 119
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTG 215
+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 120 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 216 YLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 177 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 116/215 (53%), Gaps = 18/215 (8%)
Query: 44 ATDDFHLSN-------KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
++DD+ + + +IG G FGTVYKG + + ++A + Q ++ F E+ L
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
RH N++ +G + + +V ++ E +SL L K K DI A
Sbjct: 61 RKTRHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTA 116
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTG 215
+G+ +LH + I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+
Sbjct: 117 QGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 216 YLAPEYVL---GGQLTMKADVYSFGVLVLEIISGR 247
++APE + + ++DVY+FG+++ E+++G+
Sbjct: 174 WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
+ +IG G FGTVYKG + + ++A + Q ++ F E+ L RH N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ I V ++ E +SL L K K DI A+G+ +LH +
Sbjct: 72 YSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GG 225
I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 226 QLTMKADVYSFGVLVLEIISGR 247
+ ++DVY+FG+++ E+++G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 164
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 225 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 273
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 274 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 307
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQG---VREFITEIMTLSNVRHPNLVELI 108
+IG G FG VY + N +A+K +S KQ ++ I E+ L +RHPN ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
GC ++ LV EY ++ D LL K L + + + G +GLA+LH
Sbjct: 121 GCYLREHTAWLVMEYCLGSASD--LLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH--- 173
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---G 225
+++HRD+KA NILL + K+GDFG A +I GT ++APE +L G
Sbjct: 174 NMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 226 QLTMKADVYSFGVLVLEI 243
Q K DV+S G+ +E+
Sbjct: 229 QYDGKVDVWSLGITCIEL 246
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQG---VREFITEIMTLSNVRHPNLVELI 108
+IG G FG VY + N +A+K +S KQ ++ I E+ L +RHPN ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
GC ++ LV EY ++ D LL K L + + + G +GLA+LH
Sbjct: 82 GCYLREHTAWLVMEYCLGSASD--LLEVHKK--PLQEVEIAAVTHGALQGLAYLHSH--- 134
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG---G 225
+++HRD+KA NILL + K+GDFG A +I GT ++APE +L G
Sbjct: 135 NMIHRDVKAGNILLSEPGLVKLGDFGSA-----SIMAPANXFVGTPYWMAPEVILAMDEG 189
Query: 226 QLTMKADVYSFGVLVLEI 243
Q K DV+S G+ +E+
Sbjct: 190 QYDGKVDVWSLGITCIEL 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 44/295 (14%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
D L ++G G FG V+ N +AVK L + ++F E L+N++
Sbjct: 16 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG------------ATKANIKLNWEKR 148
H ++V+ G C G I+V+EY+++ L++ L +A +L +
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQM 135
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
I IA G+ +L + H VHRD+ N L+ KIGDFG+++ D +
Sbjct: 136 LHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSR---DVYSTDYY 189
Query: 209 RIAGTT----GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQM-NKFLLE 263
R+ G T ++ PE ++ + T ++DV+SFGV++ EI + GK W Q+ N ++E
Sbjct: 190 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT---YGKQPWFQLSNTEVIE 246
Query: 264 WAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
Q E+P P E+ V C Q +R + ++ K+L
Sbjct: 247 CITQGRVLERP---------RVCPKEV---YDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
+ +IG G FGTVYKG + + ++A + Q ++ F E+ L RH N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ +V ++ E +SL L K K DI A+G+ +LH +
Sbjct: 72 YST-APQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GG 225
I+HRD+K++NI L ++ KIGDFGLA + + +H +++G+ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 226 QLTMKADVYSFGVLVLEIISGR 247
+ ++DVY+FG+++ E+++G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL ++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 27/284 (9%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRH 101
+ + +G G FG V G L + +A+K L +++ R+F+ E + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ L G + ++V EY+EN SLD L K + + + + GIA G+ +
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKY 150
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAP 219
L + VHRD+ A NIL++ K+ DFGL+++ D+ T G + +P
Sbjct: 151 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVD 279
E + + T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC-- 263
Query: 280 PELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 264 -------PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 297
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 28/278 (10%)
Query: 54 IGRGGFGTVYKGTL--TNGRR---IAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVEL 107
IG G FG VYKG L ++G++ +A+K L A + R +F+ E + H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
G + +++ EY+EN +LD+ L + + + + + + GIA G+ +L
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL---REKDGEFSVLQLVGMLRGIAAGMKYLANM-- 166
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGG 225
+ VHRD+ A NIL++ K+ DFGL+++ D+ T G + APE +
Sbjct: 167 -NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 226 QLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEY 285
+ T +DV+SFG+++ E+++ + W N +++ + P++
Sbjct: 226 KFTSASDVWSFGIVMWEVMT--YGERPYWELSNHEVMKAINDGFRLPTPMDC-------- 275
Query: 286 PPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P+ I + M C Q +RRP+ ++ +L K IR
Sbjct: 276 -PSAIYQLM---MQCWQQERARRPKFADIVSILDKLIR 309
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQG-------VREFITEIMT 95
A ++ +IG+GGFG V+KG L + + A+K L +G +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 210
A G+ ++ + P IVHRD+++ NI L E P K+ DF L++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGL 186
Query: 211 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 267
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 139/293 (47%), Gaps = 39/293 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQG-------VREFITEIMT 95
A ++ +IG+GGFG V+KG L + + A+K L +G +EF E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+SN+ HPN+V+L G R +V E+V L LL + W + + + I
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDI 131
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLD--QEFNP---KIGDFGLAKLFPDNITHITTRI 210
A G+ ++ + P IVHRD+++ NI L E P K+ DFG ++ H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGL 186
Query: 211 AGTTGYLAPEYVLGGQ--LTMKADVYSFGVLVLEIISGRNS-GKAMWGQMNKFLLEWAWQ 267
G ++APE + + T KAD YSF +++ I++G + +G++ KF+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI-KFI-----N 240
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
+ +EE L PE + PP R V C +RP + ++K L++
Sbjct: 241 MIREEG-LRPTIPE--DCPP----RLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 132/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V EY+EN SLD L K + + + + GIA G+ +L +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 137
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 198 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 246
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 247 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 116/273 (42%), Gaps = 35/273 (12%)
Query: 54 IGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCV 112
+G+G FG K T G + +K L ++ R F+ E+ + + HPN+++ IG
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 113 QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVH 172
+ R + EY++ +L ++ + + W +R IA G+A+LH +I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIH 131
Query: 173 RDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-------------TRIAGTTGYLAP 219
RD+ + N L+ + N + DFGLA+L D T + G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVD 279
E + G K DV+SFG+++ EII N+ + F L V
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN--------------VR 237
Query: 280 PELGEY-PPNEIIRYMKVAFFCTQAAASRRPQM 311
L Y PPN + + C +RP
Sbjct: 238 GFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSF 270
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 107/204 (52%), Gaps = 19/204 (9%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATK--ANIKLNWEKRSDICVGIAKGLAFLH 163
G C RR L+ EY+ SL L + +IKL + S IC KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-LQYTSQIC----KGMEYLG 134
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEY 221
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE
Sbjct: 135 ---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 222 VLGGQLTMKADVYSFGVLVLEIIS 245
+ + ++ +DV+SFGV++ E+ +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 131
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 132 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 15 KSAEREAPQGVDGELLRNVNHFSYT--ELRSATDDFHLSNKIGRGGFGTVYKGTL-TNGR 71
+S +RE PQ V E R + RS D+F KIG G G V T+ ++G+
Sbjct: 45 RSPQRE-PQRVSHEQFRAALQLVVDPGDPRSYLDNF---IKIGEGSTGIVCIATVRSSGK 100
Query: 72 RIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 131
+AVK + +Q E++ + + +H N+VE+ + G +V E++E +L
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 132 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 191
++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL + K+
Sbjct: 161 IV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 212
Query: 192 DFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 213 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 118/235 (50%), Gaps = 16/235 (6%)
Query: 15 KSAEREAPQGVDGELLRNVNHFSYT--ELRSATDDFHLSNKIGRGGFGTVYKGTL-TNGR 71
+S +RE PQ V E R + RS D+F KIG G G V T+ ++G+
Sbjct: 122 RSPQRE-PQRVSHEQFRAALQLVVDPGDPRSYLDNF---IKIGEGSTGIVCIATVRSSGK 177
Query: 72 RIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDR 131
+AVK + +Q E++ + + +H N+VE+ + G +V E++E +L
Sbjct: 178 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 237
Query: 132 VLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 191
++ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL + K+
Sbjct: 238 IV-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLS 289
Query: 192 DFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
DFG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 290 DFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 104/209 (49%), Gaps = 15/209 (7%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
+ + DF + +G G FG V+ + NGR A+K L E + V E + LS
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
V HP ++ + G + ++ +Y+E L +L + + + +++C+
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA--- 118
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
L +LH + I++RD+K NILLD+ + KI DFG AK PD +T + GT Y+
Sbjct: 119 -LEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYI 170
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
APE V D +SFG+L+ E+++G
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 131
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 132 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 130
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 131 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 16 SAEREAPQGVDGELLRNVNHFSYT--ELRSATDDFHLSNKIGRGGFGTVYKGTL-TNGRR 72
S +RE PQ V E R + RS D+F KIG G G V T+ ++G+
Sbjct: 3 SPQRE-PQRVSHEQFRAALQLVVDPGDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKL 58
Query: 73 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 132
+AVK + +Q E++ + + +H N+VE+ + G +V E++E +L +
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 133 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 192
+ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL + K+ D
Sbjct: 119 V-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 170
Query: 193 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
FG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 171 FGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 129
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 130 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 134
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 135 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 16 SAEREAPQGVDGELLRNVNHFSYT--ELRSATDDFHLSNKIGRGGFGTVYKGTL-TNGRR 72
S +RE PQ V E R + RS D+F KIG G G V T+ ++G+
Sbjct: 1 SPQRE-PQRVSHEQFRAALQLVVDPGDPRSYLDNF---IKIGEGSTGIVCIATVRSSGKL 56
Query: 73 IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRV 132
+AVK + +Q E++ + + +H N+VE+ + G +V E++E +L +
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 133 LLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGD 192
+ + ++N E+ + +C+ + + L+ LH + ++HRDIK+ +ILL + K+ D
Sbjct: 117 V-----THTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSD 168
Query: 193 FGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
FG + + GT ++APE + + D++S G++V+E++ G
Sbjct: 169 FGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 109/202 (53%), Gaps = 11/202 (5%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
+ +IG G FGTVYKG + + ++A + Q ++ F E+ L RH N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ + +V ++ E +SL L K K DI A+G+ +LH +
Sbjct: 72 YSTK-PQLAIVTQWCEGSSLYHHL---HIIETKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GG 225
I+HRD+K++NI L ++ KIGDFGLA + +H +++G+ ++APE +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 226 QLTMKADVYSFGVLVLEIISGR 247
+ ++DVY+FG+++ E+++G+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 131
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 132 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 136
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 137 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 162
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 163 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 137
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 138 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 138
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 139 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 135
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 136 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 149
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 150 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 149
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 150 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 39/284 (13%)
Query: 54 IGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V +G L G++ +A+K L +++ REF++E + HPN++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV-----GIAKGLAFLH 163
G +++ E++EN +LD L +LN + + I + GIA G+ +L
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVGMLRGIASGMRYLA 133
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTG--YLAP 219
E VHRD+ A NIL++ K+ DFGL++ +N + T+ + G + AP
Sbjct: 134 EM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVD 279
E + + T +D +S+G+++ E++S + W N+ ++ + Q+ + +
Sbjct: 191 EAIAFRKFTSASDAWSYGIVMWEVMS--FGERPYWDMSNQDVIN---AIEQDYR----LP 241
Query: 280 PELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P PP+ ++ C Q + RP+ QV+ L K IR
Sbjct: 242 P-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
D L ++G G FG V+ N +AVK L S+ ++F E L+ ++
Sbjct: 19 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 78
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----------GATKANIKLNWEKRS 149
H ++V G C +G ++V+EY+ + L+R L G A L +
Sbjct: 79 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITT 208
+ +A G+ +L H VHRD+ N L+ Q KIGDFG+++ ++ + +
Sbjct: 139 AVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 195
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
R ++ PE +L + T ++DV+SFGV++ EI + GK W Q++
Sbjct: 196 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLS 242
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ EY+ SL L K +++ K I KG+ +L
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 132
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HR++ NIL++ E KIGDFGL K+ P + + + G + + APE +
Sbjct: 133 -TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 11/198 (5%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
L ++G G FG V G +AVK + E EF E T+ + HP LV+ G
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDVAVK-MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
C + +V EY+ N L L K L + ++C + +G+AFL
Sbjct: 71 VCSKEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLESH---Q 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN--ITHITTRIAGTTGYLAPEYVLGGQL 227
+HRD+ A N L+D++ K+ DFG+ + D+ ++ + T+ + APE +
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFP--VKWSAPEVFHYFKY 182
Query: 228 TMKADVYSFGVLVLEIIS 245
+ K+DV++FG+L+ E+ S
Sbjct: 183 SSKSDVWAFGILMWEVFS 200
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
D L ++G G FG V+ N +AVK L S+ ++F E L+ ++
Sbjct: 13 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ 72
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLL-----------GATKANIKLNWEKRS 149
H ++V G C +G ++V+EY+ + L+R L G A L +
Sbjct: 73 HQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITT 208
+ +A G+ +L H VHRD+ N L+ Q KIGDFG+++ ++ + +
Sbjct: 133 AVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGG 189
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
R ++ PE +L + T ++DV+SFGV++ EI + GK W Q++
Sbjct: 190 RTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT---YGKQPWYQLS 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 104/202 (51%), Gaps = 15/202 (7%)
Query: 53 KIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G+G FG+V Y N G +AVK L +++ +R+F EI L +++H N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 108 IGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C RR L+ E++ SL L K +++ K I KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLG-- 134
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
+HRD+ NIL++ E KIGDFGL K+ P + + G + + APE +
Sbjct: 135 -TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 224 GGQLTMKADVYSFGVLVLEIIS 245
+ ++ +DV+SFGV++ E+ +
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 201
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 39/284 (13%)
Query: 54 IGRGGFGTVYKGTL-TNGRR---IAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G FG V +G L G++ +A+K L +++ REF++E + HPN++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV-----GIAKGLAFLH 163
G +++ E++EN +LD L +LN + + I + GIA G+ +L
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL--------RLNDGQFTVIQLVGMLRGIASGMRYLA 135
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI--TTRIAGTTG--YLAP 219
E VHRD+ A NIL++ K+ DFGL++ +N + T+ + G + AP
Sbjct: 136 EM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVD 279
E + + T +D +S+G+++ E++S + W N+ ++ Q ++ +
Sbjct: 193 EAIAFRKFTSASDAWSYGIVMWEVMSF--GERPYWDMSNQDVINAIEQDYR-------LP 243
Query: 280 PELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P PP+ ++ C Q + RP+ QV+ L K IR
Sbjct: 244 P-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 138
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 192
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 102/208 (49%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T ++GT YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSGTLDYLPP 176
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V E +EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V E +EN SLD L K + + + + GIA G+ +L +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 227 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 275
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 276 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 309
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
RS D+F KIG G G V T+ ++G+ +AVK + +Q E++ + + +
Sbjct: 19 RSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ + + L+
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALS 130
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
LH + ++HRDIK+ +ILL + K+ DFG + + GT ++APE
Sbjct: 131 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPE 186
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISG 246
+ + D++S G++V+E++ G
Sbjct: 187 LISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
RS D+F KIG G G V T+ ++G+ +AVK + +Q E++ + + +
Sbjct: 23 RSYLDNF---IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
H N+VE+ + G +V E++E +L ++ + ++N E+ + +C+ + + L+
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQALS 134
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
LH + ++HRDIK+ +ILL + K+ DFG + + GT ++APE
Sbjct: 135 VLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPE 190
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISG 246
+ + D++S G++V+E++ G
Sbjct: 191 LISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG+G GTVY + G+ +A++ ++ + + I EI+ + ++PN+V +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G +V EY+ SL V+ ++ + + +C + L FLH ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 172 HRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
HRDIK+ NILL + + K+ DFG A++ P+ T + GT ++APE V K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 196
Query: 231 ADVYSFGVLVLEIISG 246
D++S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEG 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + V +HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 127 SYCHSKRV---IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 180
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 120
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 174
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 126
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCGTLDYLPP 176
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY N + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG+G GTVY + G+ +A++ ++ + + I EI+ + ++PN+V +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G +V EY+ SL V+ ++ + + +C + L FLH ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 172 HRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++APE V K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPK 196
Query: 231 ADVYSFGVLVLEIISG 246
D++S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEG 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 131/277 (47%), Gaps = 27/277 (9%)
Query: 54 IGRGGFGTVYKGTLTNGRR----IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G FG V G L + +A+K L +++ R+F+ E + HPN++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G + ++V E +EN SLD L K + + + + GIA G+ +L +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 137
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVLGGQ 226
VHRD+ A NIL++ K+ DFGL+++ D+ T G + +PE + +
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 227 LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYP 286
T +DV+S+G+++ E++S + W N+ +++ + ++ P++
Sbjct: 198 FTSASDVWSYGIVLWEVMS--YGERPYWEMSNQDVIKAVDEGYRLPPPMDC--------- 246
Query: 287 PNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIR 323
P + + M C Q + RP+ Q++ +L K IR
Sbjct: 247 PAALYQLM---LDCWQKDRNNRPKFEQIVSILDKLIR 280
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 125
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 179
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY + + L +K + ++ + +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 180
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 100/201 (49%), Gaps = 10/201 (4%)
Query: 48 FHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
F + K+G G +G+VYK G+ +A+K + ES ++E I EI + P++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVK 88
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G + T +V EY S+ ++ K L ++ + I KGL +LH
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT---LTEDEIATILQSTLKGLEYLH--- 142
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRDIKA NILL+ E + K+ DFG+A D + + GT ++APE +
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQEIG 201
Query: 227 LTMKADVYSFGVLVLEIISGR 247
AD++S G+ +E+ G+
Sbjct: 202 YNCVADIWSLGITAIEMAEGK 222
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG+G GTVY + G+ +A++ ++ + + I EI+ + ++PN+V +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G +V EY+ SL V+ ++ + + +C + L FLH ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 138
Query: 172 HRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++APE V K
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 196
Query: 231 ADVYSFGVLVLEIISG 246
D++S G++ +E+I G
Sbjct: 197 VDIWSLGIMAIEMIEG 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG+G GTVY + G+ +A++ ++ + + I EI+ + ++PN+V +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G +V EY+ SL V+ ++ + + +C + L FLH ++
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 172 HRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
HRDIK+ NILL + + K+ DFG A++ P+ + + GT ++APE V K
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 197
Query: 231 ADVYSFGVLVLEIISG 246
D++S G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEG 213
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 106/209 (50%), Gaps = 26/209 (12%)
Query: 55 GRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQ 113
RG FG V+K L N +AVK + KQ + E+ E+ +L ++H N+++ IG +
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 114 GTR----RILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL--- 166
GT L+ + E SL L KAN+ ++W + I +A+GLA+LHE++
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL----KANV-VSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 167 ----VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTGYLAPEY 221
P I HRDIK+ N+LL I DFGLA F + T GT Y+APE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 222 VLGG-----QLTMKADVYSFGVLVLEIIS 245
+ G ++ D+Y+ G+++ E+ S
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 100/203 (49%), Gaps = 23/203 (11%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L K+G G FG V+ T ++AVK + S V F+ E + ++H LV
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLV 240
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + I+ E++ SL L + L K D IA+G+AF+ +
Sbjct: 241 KLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR 297
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPDNITHITTRIAGTTGYLAPEYV 222
+ +HRD++A+NIL+ KI DFGLA++ FP + APE +
Sbjct: 298 ---NYIHRDLRAANILVSASLVCKIADFGLARVGAKFP-------------IKWTAPEAI 341
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
G T+K+DV+SFG+L++EI++
Sbjct: 342 NFGSFTIKSDVWSFGILLMEIVT 364
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 25/208 (12%)
Query: 48 FHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ + ++G G FG VYK G A K + +S++ + ++I EI L+ HP +V+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFL 162
L+G + ++ E+ ++D ++L G T+ I++ +C + + L FL
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-------VCRQMLEALNFL 125
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR--IAGTTGYLAPE 220
H + I+HRD+KA N+L+ E + ++ DFG++ N+ + R GT ++APE
Sbjct: 126 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPE 179
Query: 221 YVLGGQL-----TMKADVYSFGVLVLEI 243
V+ + KAD++S G+ ++E+
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEM 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 118
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + T + GT YL P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLDYLPP 172
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 25/208 (12%)
Query: 48 FHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ + ++G G FG VYK G A K + +S++ + ++I EI L+ HP +V+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFL 162
L+G + ++ E+ ++D ++L G T+ I++ +C + + L FL
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV-------VCRQMLEALNFL 133
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR--IAGTTGYLAPE 220
H + I+HRD+KA N+L+ E + ++ DFG++ N+ + R GT ++APE
Sbjct: 134 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPE 187
Query: 221 YVLGGQL-----TMKADVYSFGVLVLEI 243
V+ + KAD++S G+ ++E+
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEM 215
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 10/195 (5%)
Query: 53 KIGRGGFGTVYKGTLT-NGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG G G V +GR++AVK + +Q E++ + + +H N+VE+
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G ++ E+++ +L ++ + ++LN E+ + +C + + LA+LH + ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMKA 231
HRDIK+ +ILL + K+ DFG ++ + GT ++APE + +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 232 DVYSFGVLVLEIISG 246
D++S G++V+E++ G
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 121
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 178
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 63
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 121
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 122 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 53 KIGRGGFGTVYKGTLTNGRRIAVKP--LSAESKQGVREFITEIMTLSNVRHPNLVELIGC 110
K+G G +G VYK + GR +A+K L AE + I EI L + HPN+V LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 111 CVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
LV+E++E + LD G + IK+ + +G+A H+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCHQH-- 138
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-Q 226
I+HRD+K N+L++ + K+ DFGLA+ F + T + T Y AP+ ++G +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 227 LTMKADVYSFGVLVLEIISGR 247
+ D++S G + E+I+G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 17/201 (8%)
Query: 53 KIGRGGFGTVYKGTLTNGRRIAVKP--LSAESKQGVREFITEIMTLSNVRHPNLVELIGC 110
K+G G +G VYK + GR +A+K L AE + I EI L + HPN+V LI
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 111 CVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
LV+E++E + LD G + IK+ + +G+A H+
Sbjct: 88 IHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKI-------YLYQLLRGVAHCHQH-- 138
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG-Q 226
I+HRD+K N+L++ + K+ DFGLA+ F + T + T Y AP+ ++G +
Sbjct: 139 -RILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKK 196
Query: 227 LTMKADVYSFGVLVLEIISGR 247
+ D++S G + E+I+G+
Sbjct: 197 YSTSVDIWSIGCIFAEMITGK 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 104/201 (51%), Gaps = 11/201 (5%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
LS +IG G FGTVYKG + + + + + + F E+ L RH N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ I V ++ E +SL + L K + DI A+G+ +LH + +
Sbjct: 100 YMTKDNLAI-VTQWCEGSSLYKHL---HVQETKFQMFQLIDIARQTAQGMDYLHAK---N 152
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPD-NITHITTRIAGTTGYLAPEYVL---GG 225
I+HRD+K++NI L + KIGDFGLA + + + + G+ ++APE +
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNN 212
Query: 226 QLTMKADVYSFGVLVLEIISG 246
+ ++DVYS+G+++ E+++G
Sbjct: 213 PFSFQSDVYSYGIVLYELMTG 233
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 179
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 105/201 (52%), Gaps = 12/201 (5%)
Query: 49 HLSN--KIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+L+N KIG G G V T + G+++AVK + +Q E++ + + H N+V
Sbjct: 46 YLANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVV 105
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
++ + G +V E++E +L ++ + ++N E+ + +C+ + + L++LH +
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIATVCLSVLRALSYLHNQ 160
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
++HRDIK+ +ILL + K+ DFG + + GT ++APE +
Sbjct: 161 ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRL 216
Query: 226 QLTMKADVYSFGVLVLEIISG 246
+ D++S G++V+E+I G
Sbjct: 217 PYGTEVDIWSLGIMVIEMIDG 237
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 147
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPP 201
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 66
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 124
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 125 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 181
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 177
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 75
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 133
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 134 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
D + +K+G G FG VY+G +AVK L ++ + V EF+ E + ++HPNLV
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L+G C + ++ E++ +L L + + + I+ + +L ++
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKK 128
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD+ A N L+ + K+ DFGL++L + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ ++K+DV++FGVL+ EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 125
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 64
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 122
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 123 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 123
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI +FG + P + T + GT YL P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPP 177
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 122
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTLDYLPP 176
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 121
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCGTLDYLPP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI +FG + P + T + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
KIG+G GTVY + G+ +A++ ++ + + I EI+ + ++PN+V +
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
+ G +V EY+ SL V+ ++ + + +C + L FLH ++
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAVCRECLQALEFLHSN---QVI 139
Query: 172 HRDIKASNILLDQEFNPKIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
HR+IK+ NILL + + K+ DFG A++ P+ T + GT ++APE V K
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVGTPYWMAPEVVTRKAYGPK 197
Query: 231 ADVYSFGVLVLEIISG 246
D++S G++ +E+I G
Sbjct: 198 VDIWSLGIMAIEMIEG 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY + + L +K + ++ + +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK----FDEQRTATYITELANAL 126
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXGTLDYLPP 180
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + G K D++S GVL E + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 14/213 (6%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNV 99
A +DF + +G+G FG VY + I A+K L + K GV + E+ S++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
RHPN++ L G TR L+ EY ++ R L +K + ++ + +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK----FDEQRTATYITELANAL 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
++ H + ++HRDIK N+LL KI DFG + P + + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCGTLDYLPP 178
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
E + G K D++S GVL E + G+ +A
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 48/290 (16%)
Query: 54 IGRGGFGTV--YKGTLTN---GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL 107
+G G FG V Y TN G +AVK L A+ R + EI L + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 108 IGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
GCC QG + + LV EYV SL L + +L + I +G+A+LH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQ 136
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
H +HR++ A N+LLD + KIGDFGLAK P+ + R G + + APE +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF----LLEWAWQL 268
+ +DV+SFGV + E+++ +S ++ GQM LLE +L
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ +K P E+ MK C + AS RP +I +L
Sbjct: 254 PRPDK------------CPCEVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
D + +K+G G +G VY+G +AVK L ++ + V EF+ E + ++HPNLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L+G C + ++ E++ +L L + + + I+ + +L ++
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKK 128
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD+ A N L+ + K+ DFGL++L + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYN 185
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ ++K+DV++FGVL+ EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 67
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 125
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 126 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 133/290 (45%), Gaps = 48/290 (16%)
Query: 54 IGRGGFGTV--YKGTLTN---GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL 107
+G G FG V Y TN G +AVK L A+ R + EI L + H ++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 108 IGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
GCC QG + + LV EYV SL L + +L + I +G+A+LH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 136
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
H +HR++ A N+LLD + KIGDFGLAK P+ + R G + + APE +
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF----LLEWAWQL 268
+ +DV+SFGV + E+++ +S ++ GQM LLE +L
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 253
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ +K P E+ MK C + AS RP +I +L
Sbjct: 254 PRPDK------------CPCEVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 62
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQI 120
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HRD+ A N L+ + K+ DFGL++L +
Sbjct: 121 SSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 101/200 (50%), Gaps = 7/200 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
D + +K+G G +G VY+G +AVK L ++ + V EF+ E + ++HPNLV
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 70
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L+G C + ++ E++ +L L + + + I+ + +L ++
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQISSAMEYLEKK 128
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD+ A N L+ + K+ DFGL++L + + APE +
Sbjct: 129 ---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYN 185
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ ++K+DV++FGVL+ EI +
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT 205
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
+DF + +G+G FG VY + I A+K L + K GV + E+ S++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ L G TR L+ EY ++ R L ++ + ++ + +A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSY 127
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
H + ++HRDIK N+LL KI DFG + P + T + GT YL PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLCGTLDYLPPEM 181
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTL-----TNGRRIAVKPLSAES-KQGVREFITEIMTLSNVRHPNLVEL 107
+G G FGTVYKG T +A+K L+ + + EF+ E + ++++ HP+LV L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 108 IGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+G C+ T +++ + EYV + D + + + LNW CV IAKG+
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GSQLLLNW------CVQIAKGM 130
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 218
+L E +VHRD+ A N+L+ + KI DFGLA+L D + ++A
Sbjct: 131 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 187
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIIS 245
E + + T ++DV+S+GV + E+++
Sbjct: 188 LECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 100/207 (48%), Gaps = 17/207 (8%)
Query: 48 FHLSNKIGRGGFGTVY--KGTLTNGRRIAVKPL---SAESKQGVREFITEIMTLSNVRHP 102
+ + +K+G GG TVY + T+ N ++A+K + E ++ ++ F E+ S + H
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLA 160
N+V +I + LV EY+E +L + G + +N+ + I G+
Sbjct: 72 NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQ------ILDGIK 125
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H+ IVHRDIK NIL+D KI DFG+AK + T + GT Y +PE
Sbjct: 126 HAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE 182
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
G D+YS G+++ E++ G
Sbjct: 183 QAKGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 108/207 (52%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTL-----TNGRRIAVKPLSAES-KQGVREFITEIMTLSNVRHPNLVEL 107
+G G FGTVYKG T +A+K L+ + + EF+ E + ++++ HP+LV L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 108 IGCCVQGTRRIL--------VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+G C+ T +++ + EYV + D + + + LNW CV IAKG+
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLLEYVHEHK-DNI-----GSQLLLNW------CVQIAKGM 153
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLA 218
+L E +VHRD+ A N+L+ + KI DFGLA+L D + ++A
Sbjct: 154 MYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMA 210
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIIS 245
E + + T ++DV+S+GV + E+++
Sbjct: 211 LECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV--REHKDNIGSQYLLNW------CVQIA 128
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 241
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 242 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 289
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 129/290 (44%), Gaps = 48/290 (16%)
Query: 54 IGRGGFGTV--YKGTLTN---GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL 107
+G G FG V Y TN G +AVK L A++ R + EI L + H ++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 108 IGCC--VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
GCC LV EYV SL L + +L + I +G+A+LH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 153
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
H +HRD+ A N+LLD + KIGDFGLAK P+ R G + + APE +
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKA-----------MWGQMNKF----LLEWAWQL 268
+ +DV+SFGV + E+++ +S ++ GQM LLE +L
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL 270
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ +K P E+ MK C + AS RP +I +L
Sbjct: 271 PRPDK------------CPAEVYHLMKN---CWETEASFRPTFENLIPIL 305
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 266
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 324
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 325 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 131
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 244
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 245 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 292
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 128
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 241
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 242 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 289
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 130
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 243
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 244 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 308
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + N + I
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQI 366
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 367 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 453
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 242
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 243 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V K +G +A K + E K +R + I E+ L P
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ E + + + +GLA+L
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y+APE +
Sbjct: 132 EKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMAPERLQ 186
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 98/200 (49%), Gaps = 7/200 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
D + +K+G G +G VY G +AVK L ++ + V EF+ E + ++HPNLV
Sbjct: 33 DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLV 91
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L+G C +V EY+ +L L + + + I+ + +L ++
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAV--VLLYMATQISSAMEYLEKK 149
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD+ A N L+ + K+ DFGL++L + + APE +
Sbjct: 150 ---NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN 206
Query: 226 QLTMKADVYSFGVLVLEIIS 245
++K+DV++FGVL+ EI +
Sbjct: 207 TFSIKSDVWAFGVLLWEIAT 226
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 133
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 246
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 247 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 294
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 121
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 234
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 235 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 282
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 26/244 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 140
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 141 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 195
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELG 283
G ++++D++S G+ ++E+ GR + G M F EL+D +
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIF---------------ELLDYIVN 240
Query: 284 EYPP 287
E PP
Sbjct: 241 EPPP 244
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 130
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 243
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 244 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 130
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 243
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 244 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 247
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 248 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 242
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 243 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 152
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 265
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 266 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 313
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 98/205 (47%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
+DF + +G+G FG VY + I A+K L + K GV + E+ S++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ L G TR L+ EY ++ R L ++ + ++ + +A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR----FDEQRTATYITELANALSY 127
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
H + ++HRDIK N+LL KI DFG + P + + GT YL PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPEM 181
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++S GVL E + G
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL A + + + + + + KGL +L
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 183
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 184 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 238
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPN 103
+ +H KIG G +G VYK G A+K + E + +G+ I EI L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L R +LV+E+++ + + LL + ++ K + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH 117
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
+ ++HRD+K N+L+++E KI DFGLA+ F + T I T Y AP+ ++
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLM 173
Query: 224 GG-QLTMKADVYSFGVLVLEIISG 246
G + + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 50/291 (17%)
Query: 54 IGRGGFGTV--YKGTLTN---GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL 107
+G G FG V Y TN G +AVK L +R + EI L + H ++V+
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 108 IGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK-------- 157
GCC QG + + LV EYV SL L CVG+A+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFAQQI 120
Query: 158 --GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
G+A+LH + H +HR + A N+LLD + KIGDFGLAK P+ + R G +
Sbjct: 121 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 216 --YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL----- 268
+ APE + + +DV+SFGV + E+++ +S ++ + + + Q+
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRL 237
Query: 269 -HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
E+ L P+ P EI MK C + AS RP ++ +L
Sbjct: 238 TELLERGERLPRPDRC---PCEIYHLMKN---CWETEASFRPTFQNLVPIL 282
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 130/291 (44%), Gaps = 50/291 (17%)
Query: 54 IGRGGFGTV--YKGTLTN---GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVEL 107
+G G FG V Y TN G +AVK L +R + EI L + H ++V+
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 108 IGCCV-QGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK-------- 157
GCC QG + + LV EYV SL L CVG+A+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------------PRHCVGLAQLLLFAQQI 121
Query: 158 --GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
G+A+LH + H +HR + A N+LLD + KIGDFGLAK P+ + R G +
Sbjct: 122 CEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 216 --YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL----- 268
+ APE + + +DV+SFGV + E+++ +S ++ + + + Q+
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRL 238
Query: 269 -HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
E+ L P+ P EI MK C + AS RP ++ +L
Sbjct: 239 TELLERGERLPRPDRC---PCEIYHLMKN---CWETEASFRPTFQNLVPIL 283
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL A + + + + + + KGL +L
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 148
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 149 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 203
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 130
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 243
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 244 -----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 291
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 37 SYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMT 95
+Y + D + +K+G G +G VY+G +AVK L ++ + V EF+ E
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAV 269
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
+ ++HPNLV+L+G C + ++ E++ +L L + + + I
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQI 327
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + +L ++ + +HR++ A N L+ + K+ DFGL++L +
Sbjct: 328 SSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ APE + + ++K+DV++FGVL+ EI +
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 176
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 137
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 250
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 251 -----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 298
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 40/300 (13%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLS------AESKQGVREFITEIMTLSNV 99
+F +G G FGTVYKG + G ++ + P++ A S + +E + E +++V
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKI-PVAIMELREATSPKANKEILDEAYVMASV 108
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGI 155
+P++ L+G C+ T +++ LD V K NI LNW CV I
Sbjct: 109 DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQI 160
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTT 214
AKG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 161 AKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEK 273
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ--- 274
Query: 274 PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 275 ------------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 322
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 176
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 123
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 179
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPN 103
+ +H KIG G +G VYK G A+K + E + +G+ I EI L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L R +LV+E+++ + + LL + ++ K + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH 117
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
+ ++HRD+K N+L+++E KI DFGLA+ F + T + T Y AP+ ++
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 224 GG-QLTMKADVYSFGVLVLEIISG 246
G + + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 126
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHPN 103
+ +H KIG G +G VYK G A+K + E + +G+ I EI L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L R +LV+E+++ + + LL + ++ K + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDL--KKLLDVCEGGLESVTAK--SFLLQLLNGIAYCH 117
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
+ ++HRD+K N+L+++E KI DFGLA+ F + T + T Y AP+ ++
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 224 GG-QLTMKADVYSFGVLVLEIISG 246
G + + D++S G + E+++G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL A + + + + + + KGL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIAVIKGLTYLR 121
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 122 EKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 176
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 104/204 (50%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 124
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ I + GT Y++PE +
Sbjct: 125 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQ 179
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 176
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 106/204 (51%), Gaps = 11/204 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
DDF +++G G G V+K + +G +A K + E K +R + I E+ L P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V G + E+++ SLD+VL K ++ + + + + KGL +L
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIKGLTYLR 121
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
E+ I+HRD+K SNIL++ K+ DFG++ D++ + GT Y++PE +
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN---SFVGTRSYMSPERLQ 176
Query: 224 GGQLTMKADVYSFGVLVLEIISGR 247
G ++++D++S G+ ++E+ GR
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK------LNWEKRSDI 151
+ +H N+V L+G C G +++ EY L L +A++ L
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I A
Sbjct: 158 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++APE + T+++DV+S+G+L+ EI S
Sbjct: 215 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 54 IGRGGFGTV----YKGTLTN-GRRIAVKPLSAESK-QGVREFITEIMTLSNVRHPNLVEL 107
+G G FG V Y N G ++AVK L ES + + EI L N+ H N+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 108 IGCCVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C + G L+ E++ + SL L K K+N +++ V I KG+ +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
VHRD+ A N+L++ E KIGDFGL K + T + + + APE ++
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKA 252
+ + +DV+SFGV + E+++ +S +
Sbjct: 203 QSKFYIASDVWSFGVTLHELLTYCDSDSS 231
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 54 IGRGGFGTV----YKGTLTN-GRRIAVKPLSAESK-QGVREFITEIMTLSNVRHPNLVEL 107
+G G FG V Y N G ++AVK L ES + + EI L N+ H N+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 108 IGCCVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
G C + G L+ E++ + SL L K K+N +++ V I KG+ +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYVL 223
VHRD+ A N+L++ E KIGDFGL K + T + + + APE ++
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 224 GGQLTMKADVYSFGVLVLEIISGRNSGKA 252
+ + +DV+SFGV + E+++ +S +
Sbjct: 191 QSKFYIASDVWSFGVTLHELLTYCDSDSS 219
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK------LNWEKRSDI 151
+ +H N+V L+G C G +++ EY L L +A++ L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I A
Sbjct: 166 SSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++APE + T+++DV+S+G+L+ EI S
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 50/313 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 200
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 258
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 259 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 306
Query: 319 TKNIRL--NEEEL 329
+ + L N+E L
Sbjct: 307 DRIVALTSNQEXL 319
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 124
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
+G+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 237
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 238 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 285
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 28/226 (12%)
Query: 55 GRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQG 114
RG FG V+K L N +AVK + KQ + EI + ++H NL++ I +G
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSE-REIFSTPGMKHENLLQFIAAEKRG 81
Query: 115 T----RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL---- 166
+ L+ + + SL L K NI + W + + +++GL++LHE++
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL----KGNI-ITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 167 ----VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTGYLAPEY 221
P I HRD K+ N+LL + + DFGLA F P T GT Y+APE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 222 VLGG-----QLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLL 262
+ G ++ D+Y+ G+++ E++S KA G +++++L
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVS---RCKAADGPVDEYML 239
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 12/197 (6%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKP-LSAESKQGVREF-ITEIMTLSNVRHPNLVELIGC 110
+G G +G V K GR +A+K L ++ + V++ + EI L +RH NLV L+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHI 170
C + R LV+E+V++ LD + L L+++ I G+ F H +I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 171 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
+HRDIK NIL+ Q K+ DFG A+ +A T Y APE ++G K
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGK 204
Query: 231 A-DVYSFGVLVLEIISG 246
A DV++ G LV E+ G
Sbjct: 205 AVDVWAIGCLVTEMFMG 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 15/199 (7%)
Query: 52 NKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
++IG+G FG VYKG + + + A+K + E + E I EI LS P + G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 110 CCVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
++ T+ ++ EY+ S LD + G + + I I KGL +LH E
Sbjct: 85 SYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI------ATILREILKGLDYLHSE--- 135
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGTTGYLAPEYVLGGQL 227
+HRDIKA+N+LL ++ + K+ DFG+A D T I GT ++APE +
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 228 TMKADVYSFGVLVLEIISG 246
KAD++S G+ +E+ G
Sbjct: 194 DFKADIWSLGITAIELAKG 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 106/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E+V+ + L + + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 22/219 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----------ANIKLNWEK 147
+ +H N+V L+G C G +++ EY L L ++ AN L+
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 148 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 207
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 208 TRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E+V + L + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F + G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 247
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 248 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 131
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 244
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 245 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 292
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 29/221 (13%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSA---ESKQGVREF-- 89
F TELR +G G FGTV+KG + G I + P+ E K G + F
Sbjct: 28 FKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKI-PVCIKVIEDKSGRQSFQA 79
Query: 90 ITE-IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLL--GATKANIKLNW 145
+T+ ++ + ++ H ++V L+G C G+ LV +Y+ SL D V GA + LNW
Sbjct: 80 VTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 138
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
V IAKG+ +L E +VHR++ A N+LL ++ DFG+A L P +
Sbjct: 139 ------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 189
Query: 206 ITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 190 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 242
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 243 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F + G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GL+F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLSFC 119
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 127
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 240
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 241 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 288
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 29/221 (13%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSA---ESKQGVREF-- 89
F TELR +G G FGTV+KG + G I + P+ E K G + F
Sbjct: 10 FKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKI-PVCIKVIEDKSGRQSFQA 61
Query: 90 ITE-IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL---DRVLLGATKANIKLNW 145
+T+ ++ + ++ H ++V L+G C G+ LV +Y+ SL R GA + LNW
Sbjct: 62 VTDHMLAIGSLDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW 120
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
V IAKG+ +L E +VHR++ A N+LL ++ DFG+A L P +
Sbjct: 121 ------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171
Query: 206 ITTRIAGT-TGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ A T ++A E + G+ T ++DV+S+GV V E+++
Sbjct: 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F + G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFGLAKL + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 247
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 248 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 247
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 248 -----------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 137 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 189
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 190 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL--GGSPYPGVPV 247
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 248 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 295
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 296 DRIVALTSNQ 305
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 13/207 (6%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREFI-TEIMTLSNVRHPN 103
D F K+G G FG V+ ++G +K ++ + Q E I EI L ++ HPN
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++++ +V E E L ++ A L+ +++ + LA+ H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
+ H+VH+D+K NIL Q+ +P KI DFGLA+LF + +T AGT Y+AP
Sbjct: 142 SQ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAP 195
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISG 246
E V +T K D++S GV++ +++G
Sbjct: 196 E-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAE---SKQGVREFITEIMT 95
+++ +DF L +G+G FG V+ + A+K L + V + E
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 96 LSNV-RHPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
LS HP L + C Q + V EY+ L + ++ K + + +
Sbjct: 72 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAA 126
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIA 211
I GL FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T
Sbjct: 127 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFC 180
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 248
GT Y+APE +LG + D +SFGVL+ E++ G++
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 200
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 258
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 259 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 306
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 307 DRIVALTSNQ 316
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 189 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 241
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 242 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 299
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 300 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 347
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 348 DRIVALTSNQ 357
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 141 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 193
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 194 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 251
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 252 EELFKLLKEGHRMDKPSNCT---------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 299
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 300 DRIVALTSNQ 309
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 140 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 192
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 193 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 250
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 251 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 298
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 299 DRIVALTSNQ 308
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD----- 150
+ +H N++ L+G C Q ++ EY +L L ++ ++ +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 151 -------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 200
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 258
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 259 EELFKLLKEGHRMDKPSNCT---------NELYMMMR---DCWHAVPSQRPTFKQLVEDL 306
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 307 DRIVALTSNQ 316
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T ++++ LD V K NI LNW CV IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 242
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 243 -----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 139
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK 197
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 121
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 139/313 (44%), Gaps = 50/313 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI------------KL 143
+ +H N++ L+G C Q ++ EY +L L + +L
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 144 NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+ + +A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 148 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 200
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 201 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT--LGGSPYPGVPV 258
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 259 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 306
Query: 319 TKNIRL--NEEEL 329
+ + L N+E L
Sbjct: 307 DRIVALTSNQEYL 319
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+ + +++ +GV I EI L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 119
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+ + +++ +GV I EI L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 118
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + T + T Y APE +
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGC 110
KIG+G FG V+KG +++ A+K + E + E I EI LS P + + G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 111 CVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
++ T+ ++ EY+ S LD + G L+ + + I I KGL +LH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILREILKGLDYLHSE---K 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
+HRDIKA+N+LL + K+ DFG+A D T + GT ++APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 183
Query: 230 KADVYSFGVLVLEIISG 246
KAD++S G+ +E+ G
Sbjct: 184 KADIWSLGITAIELARG 200
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 123
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 124 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 181
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 182 FSSKSDIWAFGVLMWEIYS 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 119
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 120 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 177
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 178 FSSKSDIWAFGVLMWEIYS 196
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDVAIK-MIKEGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 139
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 140 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 197
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 198 FSSKSDIWAFGVLMWEIYS 216
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVRHP 102
++F KIG G +G VYK G +A+K + +++ +GV I EI L + HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V+L+ + LV+E++ + L + + + I L K + +GLAF
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLAFC 120
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE +
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 223 LGGQLTMKA-DVYSFGVLVLEIISGR 247
LG + A D++S G + E+++ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 38/299 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRI----AVKPL-SAESKQGVREFITEIMTLSNVR 100
+F +G G FGTVYKG + G ++ A+K L A S + +E + E +++V
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIK----LNWEKRSDICVGIA 156
+P++ L+G C+ T +++ LD V K NI LNW CV IA
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYV--REHKDNIGSQYLLNW------CVQIA 129
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAGTTG 215
KG+ +L + +VHRD+ A N+L+ + KI DFG AKL + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLEWAWQLHQEEKP 274
++A E +L T ++DV+S+GV V E+++ G + +LE +L Q
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ---- 242
Query: 275 LELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPG 333
PP I + C A RP+ ++I +K R + L G
Sbjct: 243 -----------PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQG 290
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 182
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 54 IGRGGFGTVYKGT-LTNGRRI----AVKPLSAE-SKQGVREFITEIMTLSNVRHPNLVEL 107
+G G FGTVYKG + +G + A+K L S + +E + E ++ V P + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+G C+ T +++ LD V G + LNW C+ IAKG+++L +
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLEDV 138
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYV 222
+VHRD+ A N+L+ + KI DFGLA+L +I G ++A E +
Sbjct: 139 ---RLVHRDLAARNVLVKSPNHVKITDFGLARLL--DIDETEYHADGGKVPIKWMALESI 193
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
L + T ++DV+S+GV V E+++
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 130
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 131 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK 188
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 189 FSSKSDIWAFGVLMWEIYS 207
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 136/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K ++AVK L ++ +++ + + I+E+ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI------------KL 143
+ +H N++ L+G C Q ++ EY +L L + +L
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 144 NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+ + +A+G+ +L + +HRD+ A N+L+ ++ KI DFGLA+ +I
Sbjct: 133 SSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DI 185
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
HI T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTL--GGSPYPGVPV 243
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 244 EELFKLLKEGHRMDKPSNCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 291
Query: 319 TKNIRLNEEE 328
+ + L +
Sbjct: 292 DRIVALTSNQ 301
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 13/207 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAES--KQG-VREFITEIMTLSNVRH 101
+DF + N +G+G F VY+ ++ G +A+K + ++ K G V+ E+ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P+++EL LV E N ++R L K + + I G+ +
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLY 127
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPE 220
LH I+HRD+ SN+LL + N KI DFGLA +L + H T + GT Y++PE
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+++DV+S G + ++ GR
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAV-KPLSAESKQGVREFITEIMTLSNVRHPNL 104
D + + ++G G FG VYK +A K + +S++ + +++ EI L++ HPN+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLG----ATKANIKLNWEKRSDICVGIAKGLA 160
V+L+ ++ E+ ++D V+L T++ I++ +C L
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALN 149
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR--IAGTTGYLA 218
+LH+ I+HRD+KA NIL + + K+ DFG++ N I R GT ++A
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDXFIGTPYWMA 203
Query: 219 PEYVL-----GGQLTMKADVYSFGVLVLEI 243
PE V+ KADV+S G+ ++E+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + + I L K + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPLPLIK--SYLFQLLQGLA 118
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 7/199 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
D ++G G FG V G +A+K + E EFI E + N+ H LV+
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L G C + ++ EY+ N L L + + ++ ++C + + + +L +
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK- 124
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
+HRD+ A N L++ + K+ DFGL++ D+ + + PE ++ +
Sbjct: 125 --QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK 182
Query: 227 LTMKADVYSFGVLVLEIIS 245
+ K+D+++FGVL+ EI S
Sbjct: 183 FSSKSDIWAFGVLMWEIYS 201
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 25/210 (11%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAV-KPLSAESKQGVREFITEIMTLSNVRHPNL 104
D + + ++G G FG VYK +A K + +S++ + +++ EI L++ HPN+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLG----ATKANIKLNWEKRSDICVGIAKGLA 160
V+L+ ++ E+ ++D V+L T++ I++ +C L
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALN 149
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR--IAGTTGYLA 218
+LH+ I+HRD+KA NIL + + K+ DFG++ N I R GT ++A
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRXIQRRDSFIGTPYWMA 203
Query: 219 PEYVL-----GGQLTMKADVYSFGVLVLEI 243
PE V+ KADV+S G+ ++E+
Sbjct: 204 PEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAV-KPLSAESKQGVREFITEIMTLSNVRHPNL 104
D + + ++G G FG VYK +A K + +S++ + +++ EI L++ HPN+
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNI 96
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLG----ATKANIKLNWEKRSDICVGIAKGLA 160
V+L+ ++ E+ ++D V+L T++ I++ +C L
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALN 149
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+LH+ I+HRD+KA NIL + + K+ DFG++ I + I GT ++APE
Sbjct: 150 YLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPE 205
Query: 221 YVL-----GGQLTMKADVYSFGVLVLEI 243
V+ KADV+S G+ ++E+
Sbjct: 206 VVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGC 110
KIG+G FG V+KG +++ A+K + E + E I EI LS P + + G
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 111 CVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
++ T+ ++ EY+ S LD + G L+ + + I I KGL +LH E
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILREILKGLDYLHSE---K 144
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
+HRDIKA+N+LL + K+ DFG+A D T + GT ++APE +
Sbjct: 145 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQSAYDS 203
Query: 230 KADVYSFGVLVLEIISGR 247
KAD++S G+ +E+ G
Sbjct: 204 KADIWSLGITAIELARGE 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGC 110
KIG+G FG V+KG +++ A+K + E + E I EI LS P + + G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 111 CVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
++ T+ ++ EY+ S LD + G L+ + + I I KGL +LH E
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILREILKGLDYLHSE---K 139
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGTTGYLAPEYVLGGQLT 228
+HRDIKA+N+LL + K+ DFG+A D T I GT ++APE +
Sbjct: 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 229 MKADVYSFGVLVLEIISG 246
KAD++S G+ +E+ G
Sbjct: 198 SKADIWSLGITAIELARG 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 22/219 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK----------ANIKLNWEK 147
+ +H N+V L+G C G +++ EY L L ++ AN +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 148 RSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT 207
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +I
Sbjct: 166 LLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 208 TRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 38/305 (12%)
Query: 23 QGVDGELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLT----NGRRIAVKPL 78
+ +D LL V R T H IG+G FG VY G N + A+K L
Sbjct: 1 RDLDSALLAEVKDVLIPHERVVT---HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL 57
Query: 79 SAESK-QGVREFITEIMTLSNVRHPNLVELIGCCV--QGTRRILVYEYVENNSLDRVLLG 135
S ++ Q V F+ E + + + HPN++ LIG + +G +L+ + L +
Sbjct: 58 SRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSP 117
Query: 136 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 195
+K + +A+G+ +L E+ VHRD+ A N +LD+ F K+ DFGL
Sbjct: 118 QRNPTVK----DLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGL 170
Query: 196 AKLFPDN-----ITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSG 250
A+ D H R+ + A E + + T K+DV+SFGVL+ E+++ G
Sbjct: 171 ARDILDREYYSVQQHRHARLP--VKWTALESLQTYRFTTKSDVWSFGVLLWELLT---RG 225
Query: 251 KAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQ 310
+ ++ F L H + L P EY P+ + + M+ C +A + RP
Sbjct: 226 APPYRHIDPFDLT-----HFLAQGRRLPQP---EYCPDSLYQVMQQ---CWEADPAVRPT 274
Query: 311 MNQVI 315
++
Sbjct: 275 FRVLV 279
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLV 105
+G G FG V + T +AVK L + RE ++E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 106 ELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWEKRSDI 151
L+G C G +++ EY L D + T I L+ E
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++ A
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQ 267
++APE + T ++DV+S+G+ + E+ S +S G + + K + E
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 291 LSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 53 KIGRGGFGTVYKGTLTNGRR---IAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVELI 108
++G G FG+V +G ++ +A+K L K E + E + + +P +V LI
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--------IAKGLA 160
G C Q +LV E L + L+G KR +I V ++ G+
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVG-----------KREEIPVSNVAELLHQVSMGMK 124
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLA 218
+L E+ + VHRD+ A N+LL KI DFGL+K + ++ T R AG + A
Sbjct: 125 YLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYA 181
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIIS-GRNSGKAMWG 255
PE + + + ++DV+S+GV + E +S G+ K M G
Sbjct: 182 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 100/198 (50%), Gaps = 15/198 (7%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGC 110
KIG+G FG V+KG +++ A+K + E + E I EI LS P + + G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 111 CVQGTRRILVYEYVENNS-LDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
++ T+ ++ EY+ S LD + G L+ + + I I KGL +LH E
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEPGP------LDETQIATILREILKGLDYLHSE---K 124
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT-TRIAGTTGYLAPEYVLGGQLT 228
+HRDIKA+N+LL + K+ DFG+A D T I GT ++APE +
Sbjct: 125 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 229 MKADVYSFGVLVLEIISG 246
KAD++S G+ +E+ G
Sbjct: 183 SKADIWSLGITAIELARG 200
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLV 105
+G G FG V + T +AVK L + RE ++E+ LS + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 106 ELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWEKRSDI 151
L+G C G +++ EY L D + T I L+ E
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++ A
Sbjct: 151 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQ 267
++APE + T ++DV+S+G+ + E+ S +S G + + K + E
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 267
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 268 LSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 306
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPL-SAESKQGVREFITEIMTLSNVR 100
R+ + +IG+G +G V+ G G ++AVK + E RE TEI +R
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRE--TEIYQTVLMR 89
Query: 101 HPNLVELIGCCVQGT----RRILVYEYVENNSLDRVLLGAT---KANIKLNWEKRSDICV 153
H N++ I ++GT + L+ +Y EN SL L T K+ +KL + S
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVS---- 145
Query: 154 GIAKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI-- 206
GL LH E+ P I HRD+K+ NIL+ + I D GLA F + +
Sbjct: 146 ----GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDI 201
Query: 207 --TTRIAGTTGYLAPEYVLGGQLT-------MKADVYSFGVLVLEI 243
TR+ GT Y+ PE VL L + AD+YSFG+++ E+
Sbjct: 202 PPNTRV-GTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLV 105
+G G FG V + T +AVK L + RE ++E+ LS + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 106 ELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWEKRSDI 151
L+G C G +++ EY L D + T I L+ E
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++ A
Sbjct: 174 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQ 267
++APE + T ++DV+S+G+ + E+ S +S G + + K + E
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 290
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 291 LSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 329
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLV 105
+G G FG V + T +AVK L + RE ++E+ LS + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 106 ELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWEKRSDI 151
L+G C G +++ EY L D + T I L+ E
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++ A
Sbjct: 167 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQ 267
++APE + T ++DV+S+G+ + E+ S +S G + + K + E
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 283
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 284 LSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 322
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 19/217 (8%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAE---SKQGVREFITEIMT 95
+++ +DF L +G+G FG V+ + A+K L + V + E
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 96 LSNV-RHPNLVELIGCCVQGTRRIL-VYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
LS HP L + C Q + V EY+ L + ++ K + + +
Sbjct: 71 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDL----MYHIQSCHKFDLSRATFYAA 125
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI--THITTRIA 211
I GL FLH + IV+RD+K NILLD++ + KI DFG+ K +N+ T
Sbjct: 126 EIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFC 179
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 248
GT Y+APE +LG + D +SFGVL+ E++ G++
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 127/295 (43%), Gaps = 45/295 (15%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVRE-FITEIMTLSNV-RHPNLV 105
+G G FG V + T +AVK L + RE ++E+ LS + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 106 ELIGCCVQGTRRILVYEYVENNSL--------DRVLLGATKANI------KLNWEKRSDI 151
L+G C G +++ EY L D + T I L+ E
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+AKG+AFL + + +HRD+ A NILL KI DFGLA+ ++ ++ A
Sbjct: 169 SYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 212 G-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS---GKAMWGQMNKFLLEWAWQ 267
++APE + T ++DV+S+G+ + E+ S +S G + + K + E
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM 285
Query: 268 LHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
L E P E+ D MK C A +RP Q+++++ K I
Sbjct: 286 LSPEHAPAEMYD-------------IMKT---CWDADPLKRPTFKQIVQLIEKQI 324
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + I L K + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPLPLIK--SYLFQLLQGLA 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV-----RH 101
DF L IGRG + V L RI + + E I + T +V H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV L C +R V EYV L + + KL E I+ L +
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLAP 219
LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+AP
Sbjct: 137 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 190
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRN 248
E + G D ++ GVL+ E+++GR+
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
+D L +IGRG FG V+ G L + +AVK ++ +F+ E L HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V LIG C Q +V E V+ L +L + + A G+ +L
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYV 222
+ +HRD+ A N L+ ++ KI DFG+++ D + + + + APE +
Sbjct: 231 SKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEAL 287
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
G+ + ++DV+SFG+L+ E S
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV-----RH 101
DF L IGRG + V L RI + + E I + T +V H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV L C +R V EYV L + + KL E I+ L +
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLAP 219
LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+AP
Sbjct: 122 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 175
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRN 248
E + G D ++ GVL+ E+++GR+
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 25 VDGELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPL 78
V+ E + + E A + +S ++G+G FG VY+G R+A+K +
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 79 SAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLL 134
+ + R EF+ E + ++V L+G QG +++ E + L R L
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 135 GATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 191
A N L + K + IA G+A+L+ VHRD+ A N ++ ++F KIG
Sbjct: 124 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180
Query: 192 DFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
DFG+ + +I G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 181 DFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 108/221 (48%), Gaps = 24/221 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------- 150
+ +H N+V L+G C G +++ EY L L ++ ++ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 151 -----ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+ ++ +
Sbjct: 166 RDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 206 ITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
I A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 223 IVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV-----RH 101
DF L IGRG + V L RI + + E I + T +V H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV L C +R V EYV L + + KL E I+ L +
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLAP 219
LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+AP
Sbjct: 126 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAP 179
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRN 248
E + G D ++ GVL+ E+++GR+
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 9/203 (4%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPN 103
+D L +IGRG FG V+ G L + +AVK ++ +F+ E L HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V LIG C Q +V E V+ L +L + + A G+ +L
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLTFL---RTEGARLRVKTLLQMVGDAAAGMEYLE 230
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYV 222
+ +HRD+ A N L+ ++ KI DFG+++ D + + + + APE +
Sbjct: 231 SKCC---IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEAL 287
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
G+ + ++DV+SFG+L+ E S
Sbjct: 288 NYGRYSSESDVWSFGILLWETFS 310
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-E 88
F E + + L ++G+G FG VY+G + R+AVK ++ + R E
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 89 FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN---- 144
F+ E + ++V L+G +G ++V E + + L + L + + + N
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRP 122
Query: 145 ---WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
++ + IA G+A+L+ + VHRD+ A N ++ +F KIGDFG+ +
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 175
Query: 202 NITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+I G G ++APE + G T +D++SFGV++ EI S
Sbjct: 176 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 224
Query: 257 MNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 315
L E +Q E+ L+ V D + P N R + C Q RP +++
Sbjct: 225 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
Query: 316 KMLTKNI 322
+L ++
Sbjct: 281 NLLKDDL 287
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + I L K + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK--SYLFQLLQGLA 120
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 134/307 (43%), Gaps = 43/307 (14%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-E 88
F E + + L ++G+G FG VY+G + R+AVK ++ + R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 89 FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN---- 144
F+ E + ++V L+G +G ++V E + + L + L + + + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRP 125
Query: 145 ---WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
++ + IA G+A+L+ + VHRD+ A N ++ +F KIGDFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 202 NITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+I G G ++APE + G T +D++SFGV++ EI S
Sbjct: 179 DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 257 MNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 315
L E +Q E+ L+ V D + P N R + C Q RP +++
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 316 KMLTKNI 322
+L ++
Sbjct: 284 NLLKDDL 290
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 103/227 (45%), Gaps = 38/227 (16%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITE--IMTLSNVRHPN 103
D+ L IGRG +G VYKG+L + R +AVK S ++Q FI E I + + H N
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDN 68
Query: 104 LVELIGCCVQGT-----RRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
+ I + T +LV EY N SL + L T +W + + +G
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRG 123
Query: 159 LAFLHEEL------VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-------PDNITH 205
LA+LH EL P I HRD+ + N+L+ + I DFGL+ P +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMK--------ADVYSFGVLVLEII 244
GT Y+APE VL G + ++ D+Y+ G++ EI
Sbjct: 184 AAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGV-REFITEIMTLSNVR 100
+ ++F KIG G +G VYK G +A+K + +++ +GV I EI L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HPN+V+L+ + LV+E++ + L + + I L K + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPLPLIK--SYLFQLLQGLA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
F H ++HRD+K N+L++ E K+ DFGLA+ F + + T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 221 YVLGGQLTMKA-DVYSFGVLVLEIISGR 247
+LG + A D++S G + E+++ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 43/293 (14%)
Query: 50 LSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHP 102
L ++G+G FG VY+G + R+AVK ++ + R EF+ E +
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 155
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 139
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 140 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKG 192
Query: 216 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 270
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 193 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 237
Query: 271 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
E+ L+ V D + P N R + C Q + RP +++ +L ++
Sbjct: 238 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRR-IAVKPLSAESKQ------GVREFITEIMT 95
A + +IG G +G V+K L NG R +A+K + ++ + +RE + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRH 67
Query: 96 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVL-LGATKANIKLNWE 146
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 207 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 50/313 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEEEL 329
+ + L NEE L
Sbjct: 314 DRILTLTTNEEYL 326
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 94/209 (44%), Gaps = 17/209 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV-----RH 101
DF L IGRG + V L RI + + E I + T +V H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV L C +R V EYV L + + KL E I+ L +
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDL----MFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--LFPDNITHITTRIAGTTGYLAP 219
LHE I++RD+K N+LLD E + K+ D+G+ K L P + T + GT Y+AP
Sbjct: 169 LHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAP 222
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRN 248
E + G D ++ GVL+ E+++GR+
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 50 LSNKIGRGGFGTVYKGTLT-NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLV 105
L + +G G FG V G G ++AVK L+ + S V + EI L RHP+++
Sbjct: 20 LGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHII 79
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + +V EYV L N +L+ ++ + I G+ + H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGEL----FDYICKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+V VHRD+K N+LLD N KI DFGL+ + D G+ Y APE V+ G
Sbjct: 136 MV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISG 189
Query: 226 QLTM--KADVYSFGVLVLEIISG 246
+L + D++S GV++ ++ G
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCG 212
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNG-RRIAVKPLSAESKQ------GVREFITEIMT 95
A + +IG G +G V+K L NG R +A+K + ++ + +RE + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRH 67
Query: 96 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVL-LGATKANIKLNWE 146
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 207 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 138/313 (44%), Gaps = 50/313 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEEEL 329
+ + L NEE L
Sbjct: 314 DRILTLTTNEEYL 326
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRI--AVKPLSA-ESKQGVREFITEIMTLSNV-R 100
+D + IG G FG V K + +G R+ A+K + SK R+F E+ L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 148
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
+A+G+ +L ++ +HRD+ A NIL+ + + KI DFGL++ +
Sbjct: 135 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 268
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 192 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL--GGTPYCGMTCAELYEKLPQG 247
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 248 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 287
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRI--AVKPLSA-ESKQGVREFITEIMTLSNV-R 100
+D + IG G FG V K + +G R+ A+K + SK R+F E+ L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 148
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
+A+G+ +L ++ +HRD+ A NIL+ + + KI DFGL++ +
Sbjct: 145 LHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 268
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 202 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS--LGGTPYCGMTCAELYEKLPQG 257
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 258 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 297
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 32/237 (13%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNG-RRIAVKPLSAESKQ------GVREFITEIMT 95
A + +IG G +G V+K L NG R +A+K + ++ + +RE + +
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRH 67
Query: 96 LSNVRHPNLVELIGCCV-----QGTRRILVYEYVENN---SLDRVL-LGATKANIKLNWE 146
L HPN+V L C + T+ LV+E+V+ + LD+V G IK
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK---- 123
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
D+ + +GL FLH +VHRD+K NIL+ K+ DFGLA+++ +
Sbjct: 124 ---DMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMA 175
Query: 207 TTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
T + T Y APE +L D++S G + E+ + G + Q+ K L
Sbjct: 176 LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 53 KIGRGGFGTVYKGTL------TNGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLV 105
++G FG VYKG L + +A+K L +++ +RE F E M + ++HPN+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLL--------GATKAN--IKLNWEKRS--DICV 153
L+G + +++ Y + L L+ G+T + +K E +
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 212
IA G+ +L H+VH+D+ N+L+ + N KI D GL + ++ + +
Sbjct: 153 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++APE ++ G+ ++ +D++S+GV++ E+ S
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L + R +AVK L A+ + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 126
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD--NITHITTRIAGTT 214
+ L F H+ I+HRD+K +NIL+ K+ DFG+A+ D N T + GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTA 183
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 43/315 (13%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-E 88
F E + + L ++G+G FG VY+G + R+AVK ++ + R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 89 FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN---- 144
F+ E + ++V L+G +G ++V E + + L + L + + + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRP 125
Query: 145 ---WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
++ + IA G+A+L+ + VHRD+ A N ++ +F KIGDFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 202 NITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+I G G ++APE + G T +D++SFGV++ EI S
Sbjct: 179 DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 257 MNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 315
L E +Q E+ L+ V D + P N R + C Q RP +++
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 316 KMLTKNIRLNEEELT 330
+L ++ + E++
Sbjct: 284 NLLKDDLHPSFPEVS 298
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 53 KIGRGGFGTVYKGTL------TNGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLV 105
++G FG VYKG L + +A+K L +++ +RE F E M + ++HPN+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLL--------GATKAN--IKLNWEKRS--DICV 153
L+G + +++ Y + L L+ G+T + +K E +
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAG 212
IA G+ +L H+VH+D+ N+L+ + N KI D GL + ++ + +
Sbjct: 136 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++APE ++ G+ ++ +D++S+GV++ E+ S
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 110/239 (46%), Gaps = 25/239 (10%)
Query: 25 VDGELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPL 78
V+ E + + E A + +S ++G+G FG VY+G R+A+K +
Sbjct: 4 VNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTV 63
Query: 79 SAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLL 134
+ + R EF+ E + ++V L+G QG +++ E + L R L
Sbjct: 64 NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 135 GATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIG 191
+ N L + K + IA G+A+L+ VHRD+ A N ++ ++F KIG
Sbjct: 124 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 180
Query: 192 DFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
DFG+ + +I G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 181 DFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCV 112
+G+G +G VY G L+N RIA+K + + + EI +++H N+V+ +G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 113 QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVH 172
+ + E V SL LL + +K N + I +GL +LH+ IVH
Sbjct: 90 ENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 173 RDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ--LTM 229
RDIK N+L++ KI DFG +K I T GT Y+APE + G
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 230 KADVYSFGVLVLEIISGR 247
AD++S G ++E+ +G+
Sbjct: 205 AADIWSLGCTIIEMATGK 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L A N L +
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 181
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 182 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 116/257 (45%), Gaps = 29/257 (11%)
Query: 11 FHSKKSAEREAP----QGVDGELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGT 66
FH K++ R V+ E + + E A + +S ++G+G FG VY+G
Sbjct: 8 FHRKRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGV 67
Query: 67 LTN------GRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCCVQGTRRIL 119
R+A+K ++ + R EF+ E + ++V L+G QG ++
Sbjct: 68 AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 127
Query: 120 VYEYVENNSLD---RVLLGATKANIKL---NWEKRSDICVGIAKGLAFLHEELVPHIVHR 173
+ E + L R L + N L + K + IA G+A+L+ VHR
Sbjct: 128 IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHR 184
Query: 174 DIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLT 228
D+ A N ++ ++F KIGDFG+ + +I G G +++PE + G T
Sbjct: 185 DLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 240
Query: 229 MKADVYSFGVLVLEIIS 245
+DV+SFGV++ EI +
Sbjct: 241 TYSDVWSFGVVLWEIAT 257
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L + R +AVK L A+ + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 126
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTT 214
+ L F H+ I+HRD+K +NI++ K+ DFG+A+ D+ +T A GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L + R +AVK L A+ + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 126
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTT 214
+ L F H+ I+HRD+K +NI++ K+ DFG+A+ D+ +T A GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 43/315 (13%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-E 88
F E + + L ++G+G FG VY+G + R+AVK ++ + R E
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 89 FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN---- 144
F+ E + ++V L+G +G ++V E + + L + L + + + N
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRP 125
Query: 145 ---WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
++ + IA G+A+L+ + VHRD+ A N ++ +F KIGDFG+ +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR---- 178
Query: 202 NITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+I G G ++APE + G T +D++SFGV++ EI S
Sbjct: 179 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS----------- 227
Query: 257 MNKFLLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVI 315
L E +Q E+ L+ V D + P N R + C Q RP +++
Sbjct: 228 ----LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 283
Query: 316 KMLTKNIRLNEEELT 330
+L ++ + E++
Sbjct: 284 NLLKDDLHPSFPEVS 298
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 106/210 (50%), Gaps = 14/210 (6%)
Query: 53 KIGRGGFGTVYKGTLTNGRR---IAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVELI 108
++G G FG+V +G ++ +A+K L K E + E + + +P +V LI
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
G C Q +LV E L + L+G + ++ +++ ++ G+ +L E+
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKRE---EIPVSNVAELLHQVSMGMKYLEEK--- 455
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGGQ 226
+ VHR++ A N+LL KI DFGL+K + ++ T R AG + APE + +
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 227 LTMKADVYSFGVLVLEIIS-GRNSGKAMWG 255
+ ++DV+S+GV + E +S G+ K M G
Sbjct: 516 FSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCV 112
+G+G +G VY G L+N RIA+K + + + EI +++H N+V+ +G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 113 QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVH 172
+ + E V SL LL + +K N + I +GL +LH+ IVH
Sbjct: 76 ENGFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 173 RDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ--LTM 229
RDIK N+L++ KI DFG +K I T GT Y+APE + G
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 230 KADVYSFGVLVLEIISGR 247
AD++S G ++E+ +G+
Sbjct: 191 AADIWSLGCTIIEMATGK 208
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 11/203 (5%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIGC 110
+IG+G FG V+KG +++ A+K + E + E I EI LS + + G
Sbjct: 30 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHI 170
++G++ ++ EY+ S +L ++ + + I KGL +LH E
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI-----ATMLKEILKGLDYLHSE---KK 141
Query: 171 VHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTMK 230
+HRDIKA+N+LL ++ + K+ DFG+A D T + GT ++APE + K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQSAYDSK 200
Query: 231 ADVYSFGVLVLEIISGRNSGKAM 253
AD++S G+ +E+ G M
Sbjct: 201 ADIWSLGITAIELAKGEPPNSDM 223
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 176
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 177 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 314 DRILTLTTNEE 324
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 53 KIGRGGFGTVYKG-TLTNGRRIAVKP-LSAESKQGVREF-ITEIMTLSNVRHPNLVELIG 109
KIG G +G V+K G+ +A+K L +E +++ + EI L ++HPNLV L+
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 110 CCVQGTRRILVYEYVEN---NSLDRVLLGATKANIK-LNWEKRSDICVGIAKGLAFLHEE 165
+ R LV+EY ++ + LDR G + +K + W+ + + F H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCHKH 121
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ +HRD+K NIL+ + K+ DFG A+L + +A T Y +PE ++G
Sbjct: 122 ---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGD 177
Query: 226 -QLTMKADVYSFGVLVLEIISG 246
Q DV++ G + E++SG
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSG 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 136/308 (44%), Gaps = 44/308 (14%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +NI
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 210
Query: 204 THITTRIAG--TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 211 DYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPVEEL 268
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKN 321
+ + H+ +KP NE+ M+ C A S+RP Q+++ L +
Sbjct: 269 FKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDLDRI 316
Query: 322 IRL--NEE 327
+ L NEE
Sbjct: 317 LTLTTNEE 324
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXET 185
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 186 DXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 314 DRILTLTTNEE 324
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 130/293 (44%), Gaps = 43/293 (14%)
Query: 50 LSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHP 102
L ++G+G FG VY+G + R+AVK ++ + R EF+ E +
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------WEKRSDICVGI 155
++V L+G +G ++V E + + L + L + + + N ++ + I
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTLQEMIQMAAEI 138
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
A G+A+L+ + VHRD+ A N ++ +F KIGDFG+ + +I G G
Sbjct: 139 ADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKG 191
Query: 216 -----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 270
++APE + G T +D++SFGV++ EI S L E +Q
Sbjct: 192 LLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLS 236
Query: 271 EEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI 322
E+ L+ V D + P N R + C Q RP +++ +L ++
Sbjct: 237 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVRHP 102
+F + KIGRG F VY+ L +G +A+K + + + I EI L + HP
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+++ ++ +V E + L R++ K + V + L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
H ++HRDIK +N+ + K+GD GL + F T + + GT Y++PE +
Sbjct: 153 HSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSPERI 208
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
K+D++S G L+ E+ +
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAA 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
DDF + +G+G FG VY + I A+K L S K+GV + EI S++RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ + R L+ E+ L + L + + + + ++ + +A L +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHY 129
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
HE V +HRDIK N+L+ + KI DFG + P + + GT YL PE
Sbjct: 130 CHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEM 183
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++ GVL E + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 52 NKIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+++G+G FG+V Y N G +AVK L R+F EI L + +V+
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 107 LIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
G R+ L V EY+ + L L + +L+ + I KG+ +L
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGS 145
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYV 222
VHRD+ A NIL++ E + KI DFGLAKL P + + R G + + APE +
Sbjct: 146 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
+ ++DV+SFGV++ E+ +
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 314 DRILTLTTNEE 324
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
DDF + +G+G FG VY + I A+K L S K+GV + EI S++RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ + R L+ E+ L + L + + + + ++ + +A L +
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHY 130
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
HE V +HRDIK N+L+ + KI DFG + P + + GT YL PE
Sbjct: 131 CHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEM 184
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++ GVL E + G
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 108/225 (48%), Gaps = 32/225 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D +L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ D
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKTPEDLYKDFL 145
Query: 151 -----ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---P 200
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Query: 201 DNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
D + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 203 DXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 42/307 (13%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +NI
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNI 256
Query: 204 THITTRIAG--TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFL 261
+ G ++APE + T ++DV+SFGVL+ EI + G G + L
Sbjct: 257 DYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPVEEL 314
Query: 262 LEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKN 321
+ + H+ +KP NE+ M+ C A S+RP Q+++ L +
Sbjct: 315 FKLLKEGHRMDKPANCT---------NELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 362
Query: 322 IRLNEEE 328
+ L E
Sbjct: 363 LTLTTNE 369
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 36 FSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-E 88
F E A + +S ++G+G FG VY+G R+A+K ++ + R E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 89 FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL-- 143
F+ E + ++V L+G QG +++ E + L R L + N L
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 144 -NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN 202
+ K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----D 178
Query: 203 ITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
I G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 179 IYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 52 NKIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+++G+G FG+V Y N G +AVK L R+F EI L + +V+
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 107 LIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
G R+ L V EY+ + L L + +L+ + I KG+ +L
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGS 132
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYV 222
VHRD+ A NIL++ E + KI DFGLAKL P + + R G + + APE +
Sbjct: 133 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
+ ++DV+SFGV++ E+ +
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 20/197 (10%)
Query: 57 GGFGTVYKGTLTNGRRIAV-KPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGT 115
G FG VYK +A K + +S++ + +++ EI L++ HPN+V+L+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 116 RRILVYEYVENNSLDRVLL----GATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
++ E+ ++D V+L T++ I++ +C L +LH+ I+
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQV-------VCKQTLDALNYLHDN---KII 130
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL-----GGQ 226
HRD+KA NIL + + K+ DFG++ GT ++APE V+
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 227 LTMKADVYSFGVLVLEI 243
KADV+S G+ ++E+
Sbjct: 191 YDYKADVWSLGITLIEM 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 52 NKIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+++G+G FG+V Y N G +AVK L R+F EI L + +V+
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 107 LIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
G R+ L V EY+ + L L + +L+ + I KG+ +L
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGS 133
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYV 222
VHRD+ A NIL++ E + KI DFGLAKL P + + R G + + APE +
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
+ ++DV+SFGV++ E+ +
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 31/228 (13%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GR-----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
++ +G G FG V + T G+ ++AVK L + + +E ++E+ +S+
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 99 V-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------- 150
+ +H N+V L+G C G +++ EY L L +A + + D
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 151 ------------ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL 198
+A+G+AFL + + +HRD+ A N+LL KIGDFGLA+
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 199 FPDNITHITTRIAG-TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ +I A ++APE + T+++DV+S+G+L+ EI S
Sbjct: 208 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
DDF + +G+G FG VY + I A+K L S K+GV + EI S++RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ + R L+ E+ L + L + + + + ++ + +A L +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALHY 129
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
HE V +HRDIK N+L+ + KI DFG + P + + GT YL PE
Sbjct: 130 CHERKV---IHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPPEM 183
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++ GVL E + G
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 53/336 (15%)
Query: 24 GVDGELLRNVNHFSYTE---LRSATDDFHLSNKIGRGGFGTVY--------KGTLTNGRR 72
+D +L V+ + E D L +G G FG V K
Sbjct: 2 AMDTPMLAGVSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVT 61
Query: 73 IAVKPLSAE-SKQGVREFITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLD 130
+AVK L + +++ + + ++E+ + + +H N++ L+G C Q ++ EY +L
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 131 RVLLGATKANIKLNWE-----------KRSDICV-GIAKGLAFLHEELVPHIVHRDIKAS 178
L ++ +++ K C +A+G+ +L + +HRD+ A
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 179 NILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG-----YLAPEYVLGGQLTMKADV 233
N+L+ + KI DFGLA+ +I +I T G ++APE + T ++DV
Sbjct: 179 NVLVTENNVMKIADFGLAR----DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 234
Query: 234 YSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRY 293
+SFGVL+ EI + G G + L + + H+ +KP NE+
Sbjct: 235 WSFGVLMWEIFT--LGGSPYPGIPVEELFKLLKEGHRMDKPANCT---------NELYMM 283
Query: 294 MKVAFFCTQAAASRRPQMNQVIKMLTKNIRL--NEE 327
M+ C A S+RP Q+++ L + + L NEE
Sbjct: 284 MRD---CWHAVPSQRPTFKQLVEDLDRILTLTTNEE 316
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 178
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 184
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 8 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 64
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 119
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 180 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 7 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 63
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 118
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 179 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRI--AVKPLSA-ESKQGVREFITEIMTLSNV-R 100
+D + IG G FG V K + +G R+ A+K + SK R+F E+ L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL------------DRVLLGATKANIKLNWEKR 148
HPN++ L+G C L EY + +L D A L+ ++
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
+A+G+ +L ++ +HR++ A NIL+ + + KI DFGL++ +
Sbjct: 142 LHFAADVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQL 268
R+ ++A E + T +DV+S+GVL+ EI+S G G L E Q
Sbjct: 199 RLP--VRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSL--GGTPYCGMTCAELYEKLPQG 254
Query: 269 HQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
++ EKPL D E+ M+ C + RP Q++ L +
Sbjct: 255 YRLEKPLNCDD---------EVYDLMRQ---CWREKPYERPSFAQILVSLNR 294
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 41 LRSATDD------FHLSNKIGRGGFGTV--YKGTLTNGRRIAVKPLSAE--SKQGVREFI 90
+ SATD+ + L IG+G F V + LT GR +AVK + + +++
Sbjct: 4 ITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLF 62
Query: 91 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 150
E+ + + HPN+V+L LV EY + L+ + K E R+
Sbjct: 63 REVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAK 119
Query: 151 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 210
I + + H++ +IVHRD+KA N+LLD + N KI DFG + F + +
Sbjct: 120 FR-QIVSAVQYCHQK---YIVHRDLKAENLLLDGDMNIKIADFGFSNEF--TVGNKLDTF 173
Query: 211 AGTTGYLAPEYVLGGQLT-MKADVYSFGVLVLEIISG 246
G+ Y APE G + + DV+S GV++ ++SG
Sbjct: 174 CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 184
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 185 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N ++ ++F KIGDFG+ + +I
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYET 185
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 186 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 107/214 (50%), Gaps = 11/214 (5%)
Query: 53 KIGRGGFG-TVYKGTLTNGRRIAVKPL--SAESKQGVREFITEIMTLSNVRHPNLVELIG 109
KIG G FG + + +GR+ +K + S S + E E+ L+N++HPN+V+
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ +V +Y E L + + + + ++ D V I L +H+
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALKHVHDR---K 145
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
I+HRDIK+ NI L ++ ++GDFG+A++ ++ + GT YL+PE
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVL-NSTVELARACIGTPYYLSPEICENKPYNN 204
Query: 230 KADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLE 263
K+D+++ G ++ E+ + +++ +A G M +L+
Sbjct: 205 KSDIWALGCVLYELCTLKHAFEA--GSMKNLVLK 236
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L R +AVK L A+ + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 71 HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 126
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTT 214
+ L F H+ I+HRD+K +NI++ K+ DFG+A+ D+ +T A GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 196
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 197 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPV 254
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 255 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 302
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 303 DRILTLTTNEE 313
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S + H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 211
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + +I DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 314 DRILTLTTNEE 324
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 13 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 69
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 124
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 185 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 10 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 66
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 121
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 182 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 185 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 237
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 102
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 157
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 218 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 29/214 (13%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELI 108
L IG+G FG V++G G +AVK S+ E + RE EI +RH N++ I
Sbjct: 33 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGFI 89
Query: 109 GCCVQG----TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+ T+ LV +Y E+ SL L T + E + + A GLA LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHM 144
Query: 165 ELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLA---KLFPDNITHITTRIAGTTGY 216
E+V P I HRD+K+ NIL+ + I D GLA D I GT Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 217 LAPEYVLGGQLTMK-------ADVYSFGVLVLEI 243
+APE VL + MK AD+Y+ G++ EI
Sbjct: 205 MAPE-VLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 175 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 227
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
A +D L+ +G G FG VY+G TN + +AVK + +E F++E + + N
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 99 VRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEKRSD 150
+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-------- 133
Query: 151 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 210
I K +A+L + VHRDI NIL+ K+GDFGL++ D + +
Sbjct: 134 ----ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 186
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 270
+++PE + + T +DV+ F V + EI+S +G+ F LE +
Sbjct: 187 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDVIGV 238
Query: 271 EEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 327
EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 239 LEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVRE--FITEIMTLSNV 99
S +D+ + IG G +G K ++G+ + K L S + ++E+ L +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 100 RHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
+HPN+V + T L V EY E L V+ TK L+ E + +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 158 GLAFLHEELV--PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
L H ++HRD+K +N+ LD + N K+GDFGLA++ + + T GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT-FVGTPY 181
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
Y++PE + K+D++S G L+ E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 107/225 (47%), Gaps = 33/225 (14%)
Query: 50 LSNKIGRGGFGTVYKGTLTN--GR----RIAVKPLSAE-SKQGVREFITEIMTLSNVRHP 102
L +G G FG V K T + GR +AVK L S +R+ ++E L V HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IKLNWEKRSD 150
++++L G C Q +L+ EY + SL L + K L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 151 ICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN 202
+ +G I++G+ +L E +VHRD+ A NIL+ + KI DFGL++ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEE 203
Query: 203 ITHITTRIAG--TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+++ R G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 204 DSYV-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
A +D L+ +G G FG VY+G TN + +AVK + +E F++E + + N
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 99 VRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEKRSD 150
+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-------- 117
Query: 151 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 210
I K +A+L + VHRDI NIL+ K+GDFGL++ D + +
Sbjct: 118 ----ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 170
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 270
+++PE + + T +DV+ F V + EI+S +G+ F LE +
Sbjct: 171 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDVIGV 222
Query: 271 EEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 327
EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 223 LEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 173 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 225
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 210
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 158 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 210
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 133/297 (44%), Gaps = 42/297 (14%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTLTNGR----RIAVKPLSAESKQGVRE-FITEIMTLSN 98
A +D L+ +G G FG VY+G TN + +AVK + +E F++E + + N
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 99 VRHPNLVELIGCCVQGTRRILVY--------EYVENNSLDRVLLGATKANIKLNWEKRSD 150
+ HP++V+LIG + I++ Y+E N +L +++
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ-------- 121
Query: 151 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 210
I K +A+L + VHRDI NIL+ K+GDFGL++ D + +
Sbjct: 122 ----ICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT 174
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQ 270
+++PE + + T +DV+ F V + EI+S +G+ F LE +
Sbjct: 175 RLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS--------FGKQPFFWLENKDVIGV 226
Query: 271 EEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEE 327
EK L P+L PP + Y + C S RP+ +++ L+ ++ ++
Sbjct: 227 LEKGDRLPKPDLC--PP---VLYTLMT-RCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLV 105
+ + ++G GGFG V + + G ++A+K E RE + EI + + HPN+V
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 106 EL------IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+ +L EY E L R L + L + I+ L
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 160 AFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+LHE I+HRD+K NI+L Q KI D G AK + + T GT Y
Sbjct: 136 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 190
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
LAPE + + T+ D +SFG L E I+G
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 43 SATDDFHLSNK-------IGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FI 90
S+T D+ + + IG G FG V++G + +A+K + VRE F+
Sbjct: 28 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 87
Query: 91 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 150
E +T+ HP++V+LIG + I++ E L R L K ++ L S
Sbjct: 88 QEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SL 141
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
I ++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + +
Sbjct: 142 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 198
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
+ ++APE + + T +DV+ FGV + EI+
Sbjct: 199 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 234
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLV 105
+ + ++G GGFG V + + G ++A+K E RE + EI + + HPN+V
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 106 EL------IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+ +L EY E L R L + L + I+ L
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 160 AFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
+LHE I+HRD+K NI+L Q KI D G AK + + T GT Y
Sbjct: 135 RYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQY 189
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
LAPE + + T+ D +SFG L E I+G
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 211
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L R +AVK L A+ + F E + +
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 71 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 126
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTT 214
+ L F H+ I+HRD+K +NI++ K+ DFG+A+ D+ +T A GT
Sbjct: 127 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 183
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 150 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 202
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 23/216 (10%)
Query: 43 SATDDFHLSNK-------IGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FI 90
S+T D+ + + IG G FG V++G + +A+K + VRE F+
Sbjct: 5 SSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 91 TEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 150
E +T+ HP++V+LIG + I++ E L R L K ++ L S
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SL 118
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
I ++ LA+L + VHRDI A N+L+ K+GDFGL++ D+ + +
Sbjct: 119 ILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 175
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
+ ++APE + + T +DV+ FGV + EI+
Sbjct: 176 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 43/311 (13%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E + + L ++G+G FG VY+G + R+AVK ++ + R EF+ E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------W 145
+ ++V L+G +G ++V E + + L + L + + + N
Sbjct: 72 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTL 130
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
++ + IA G+A+L+ + VHR++ A N ++ +F KIGDFG+ + +I
Sbjct: 131 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYE 183
Query: 206 ITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKF 260
G G ++APE + G T +D++SFGV++ EI S
Sbjct: 184 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 228
Query: 261 LLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
L E +Q E+ L+ V D + P N R + C Q + RP +++ +L
Sbjct: 229 LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 288
Query: 320 KNIRLNEEELT 330
++ + E++
Sbjct: 289 DDLHPSFPEVS 299
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 138/311 (44%), Gaps = 43/311 (13%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E + + L ++G+G FG VY+G + R+AVK ++ + R EF+ E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLN-------W 145
+ ++V L+G +G ++V E + + L + L + + + N
Sbjct: 71 ASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDL-KSYLRSLRPEAENNPGRPPPTL 129
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
++ + IA G+A+L+ + VHR++ A N ++ +F KIGDFG+ + +I
Sbjct: 130 QEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTR----DIYE 182
Query: 206 ITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKF 260
G G ++APE + G T +D++SFGV++ EI S
Sbjct: 183 TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS--------------- 227
Query: 261 LLEWAWQLHQEEKPLELV-DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLT 319
L E +Q E+ L+ V D + P N R + C Q + RP +++ +L
Sbjct: 228 LAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLK 287
Query: 320 KNIRLNEEELT 330
++ + E++
Sbjct: 288 DDLHPSFPEVS 298
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 165 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRASYYRKGGCAMLPVK 217
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D +L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK--------LNWEKR 148
+ H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 147 IXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 204 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 8/210 (3%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVRE--FITEIMTLSNV 99
S +D+ + IG G +G K ++G+ + K L S + ++E+ L +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 100 RHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
+HPN+V + T L V EY E L V+ TK L+ E + +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 158 GLAFLHEELV--PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
L H ++HRD+K +N+ LD + N K+GDFGLA++ ++ T GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDTSFAKAFVGTPY 181
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
Y++PE + K+D++S G L+ E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 159 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAQ---DIYRASYYRKGGCAMLPVK 211
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ L IG+G FG V G G ++AVK + ++ + F+ E ++ +RH NLV+
Sbjct: 22 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQ 78
Query: 107 LIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L+G V+ + +V EY+ SL L ++ L + + + + + +L
Sbjct: 79 LLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 136
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A N+L+ ++ K+ DFGL K + T T ++ + APE +
Sbjct: 137 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREK 189
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ + K+DV+SFG+L+ EI S
Sbjct: 190 KFSTKSDVWSFGILLWEIYS 209
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 50 LSNKIGRGGFGTVYKGTLTN----GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNL 104
L IG G FG V++G + +A+K + VRE F+ E +T+ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFL 162
V+LIG + I++ E L R L K ++ L S I ++ LA+L
Sbjct: 74 VKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILYAYQLSTALAYL 127
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
+ VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE +
Sbjct: 128 ESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 223 LGGQLTMKADVYSFGVLVLEII 244
+ T +DV+ FGV + EI+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 101/200 (50%), Gaps = 13/200 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ L IG+G FG V G G ++AVK + ++ + F+ E ++ +RH NLV+
Sbjct: 13 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQ 69
Query: 107 LIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L+G V+ + +V EY+ SL L ++ L + + + + + +L
Sbjct: 70 LLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 127
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A N+L+ ++ K+ DFGL K + T T ++ + APE +
Sbjct: 128 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKL--PVKWTAPEALREA 180
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ K+DV+SFG+L+ EI S
Sbjct: 181 AFSTKSDVWSFGILLWEIYS 200
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 134/306 (43%), Gaps = 48/306 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ EY +L L ++ +++
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DI 194
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 195 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTL--GGSPYPGIPV 252
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 253 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 300
Query: 319 TKNIRL 324
+ + L
Sbjct: 301 DRILTL 306
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 49 HLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FITEIMTLSNVRHPN 103
L IG G FG V++G + +A+K + VRE F+ E +T+ HP+
Sbjct: 10 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 69
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAF 161
+V+LIG + I++ E L R L K ++ L S I ++ LA+
Sbjct: 70 IVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILYAYQLSTALAY 123
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 222 VLGGQLTMKADVYSFGVLVLEII 244
+ + T +DV+ FGV + EI+
Sbjct: 181 INFRRFTSASDVWMFGVCMWEIL 203
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ L IG+G FG V G G ++AVK + ++ + F+ E ++ +RH NLV+
Sbjct: 7 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQ 63
Query: 107 LIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L+G V+ + +V EY+ SL L ++ L + + + + + +L
Sbjct: 64 LLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 121
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A N+L+ ++ K+ DFGL K + T T ++ + APE +
Sbjct: 122 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREK 174
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ + K+DV+SFG+L+ EI S
Sbjct: 175 KFSTKSDVWSFGILLWEIYS 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 17/212 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVR---EFITEIMTLSNVR 100
+D + L +G GG V+ L R +AVK L A+ + F E + +
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 101 HPNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
HP +V + G +V EYV+ +L ++ K E +D C
Sbjct: 88 HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC---- 143
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA--GTT 214
+ L F H+ I+HRD+K +NI++ K+ DFG+A+ D+ +T A GT
Sbjct: 144 QALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTA 200
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
YL+PE G + ++DVYS G ++ E+++G
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 25/224 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITE 92
E A + +S ++G+G FG VY+G R+A+K ++ + R EF+ E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLD---RVLLGATKANIKL---NWE 146
+ ++V L+G QG +++ E + L R L + N L +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI 206
K + IA G+A+L+ VHRD+ A N + ++F KIGDFG+ + +I
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR----DIYET 178
Query: 207 TTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
G G +++PE + G T +DV+SFGV++ EI +
Sbjct: 179 DYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 49 HLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FITEIMTLSNVRHPN 103
L IG G FG V++G + +A+K + VRE F+ E +T+ HP+
Sbjct: 15 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAF 161
+V+LIG + I++ E L R L K ++ L S I ++ LA+
Sbjct: 75 IVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILYAYQLSTALAY 128
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 222 VLGGQLTMKADVYSFGVLVLEII 244
+ + T +DV+ FGV + EI+
Sbjct: 186 INFRRFTSASDVWMFGVCMWEIL 208
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 50 LSNKIGRGGFGTVYKGTLTN--GR----RIAVKPLSAE-SKQGVREFITEIMTLSNVRHP 102
L +G G FG V K T + GR +AVK L S +R+ ++E L V HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IKLNWEKRSD 150
++++L G C Q +L+ EY + SL L + K L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 151 ICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN 202
+ +G I++G+ +L E +VHRD+ A NIL+ + KI DFGL++ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSR----D 199
Query: 203 ITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ + + + G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 39/228 (17%)
Query: 50 LSNKIGRGGFGTVYKGTLTN--GR----RIAVKPLSAE-SKQGVREFITEIMTLSNVRHP 102
L +G G FG V K T + GR +AVK L S +R+ ++E L V HP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKAN------------IKLNWEKRSD 150
++++L G C Q +L+ EY + SL L + K L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 151 ICVG--------IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDN 202
+ +G I++G+ +L E +VHRD+ A NIL+ + KI DFGL++ +
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSR----D 199
Query: 203 ITHITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+ + + + G ++A E + T ++DV+SFGVL+ EI++
Sbjct: 200 VYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+ L IG+G FG V G G ++AVK + ++ + F+ E ++ +RH NLV+
Sbjct: 194 ELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQ 250
Query: 107 LIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
L+G V+ + +V EY+ SL L ++ L + + + + + +L
Sbjct: 251 LLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN 308
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A N+L+ ++ K+ DFGL K + T T ++ + APE +
Sbjct: 309 ---NFVHRDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLP--VKWTAPEALREK 361
Query: 226 QLTMKADVYSFGVLVLEIIS 245
+ + K+DV+SFG+L+ EI S
Sbjct: 362 KFSTKSDVWSFGILLWEIYS 381
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPLS-AESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 199 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAGYYRKGGCAMLPVK 251
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 50 LSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FITEIMTLSNVRHPNL 104
L IG G FG V++G + +A+K + VRE F+ E +T+ HP++
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 73
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAFL 162
V+LIG + I++ E L R L K ++ L S I ++ LA+L
Sbjct: 74 VKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILYAYQLSTALAYL 127
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYV 222
+ VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE +
Sbjct: 128 ESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 223 LGGQLTMKADVYSFGVLVLEII 244
+ T +DV+ FGV + EI+
Sbjct: 185 NFRRFTSASDVWMFGVCMWEIL 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 25/210 (11%)
Query: 54 IGRGGFGTVYKGTLT------NGRRIAVKPL-SAESKQGVREFITEIMTLSNVRHPNLVE 106
+G G FG VY+G ++ + ++AVK L S+Q +F+ E + +S H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD---ICVGIAKGLAFLH 163
IG +Q R ++ E + L L + + D + IA G +L
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 164 EELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT----G 215
E H +HRDI A N LL P KIGDFG+A+ D R G
Sbjct: 176 EN---HFIHRDIAARNCLLTCP-GPGRVAKIGDFGMAR---DIYRAGYYRKGGCAMLPVK 228
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++ PE + G T K D +SFGVL+ EI S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 49 HLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAESKQGVRE-FITEIMTLSNVRHPN 103
L IG G FG V++G + +A+K + VRE F+ E +T+ HP+
Sbjct: 16 ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 75
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAF 161
+V+LIG + I++ E L R L K ++ L S I ++ LA+
Sbjct: 76 IVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKYSLDLA----SLILYAYQLSTALAY 129
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 222 VLGGQLTMKADVYSFGVLVLEII 244
+ + T +DV+ FGV + EI+
Sbjct: 187 INFRRFTSASDVWMFGVCMWEIL 209
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 136/311 (43%), Gaps = 50/311 (16%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ Y +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRL--NEE 327
+ + L NEE
Sbjct: 314 DRILTLTTNEE 324
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 49 HLSNKIGRGGFGTVYKGTLTN----GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPN 103
L IG G FG V++G + +A+K + VRE F+ E +T+ HP+
Sbjct: 13 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAF 161
+V+LIG + I++ E L R L K ++ L S I ++ LA+
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKFSLDLA----SLILYAYQLSTALAY 126
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 183
Query: 222 VLGGQLTMKADVYSFGVLVLEII 244
+ + T +DV+ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK----------LNWE 146
+ H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNI 203
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 149 HLIXYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 204 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 206 RKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 22/201 (10%)
Query: 54 IGRGGFGTVYKGTLTN----GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNLVELI 108
IG G FG V++G + +A+K + VRE F+ E +T+ HP++V+LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANI---KLNWEKRSDICVG--IAKGLAFLH 163
G + I+ ++ LG ++ + K + + S I ++ LA+L
Sbjct: 458 GVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
+ VHRDI A N+L+ K+GDFGL++ D+ + ++ ++APE +
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 224 GGQLTMKADVYSFGVLVLEII 244
+ T +DV+ FGV + EI+
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + +++ +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKEAPEDLYKDF 146
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 204 PDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D +L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIK--------LNWEKR 148
+ H N+V L+G C + G +++ E+ + +L L + L E
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
+AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 147 ICYSFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 203
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 204 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 49 HLSNKIGRGGFGTVYKGTLTN----GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPN 103
L IG G FG V++G + +A+K + VRE F+ E +T+ HP+
Sbjct: 13 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPH 72
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG--IAKGLAF 161
+V+LIG + I++ E L R L K ++ L S I ++ LA+
Sbjct: 73 IVKLIGVITENPVWIIM-ELCTLGEL-RSFLQVRKFSLDLA----SLILYAYQLSTALAY 126
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + VHRDI A N+L+ K+GDFGL++ D+ ++ ++APE
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPES 183
Query: 222 VLGGQLTMKADVYSFGVLVLEII 244
+ + T +DV+ FGV + EI+
Sbjct: 184 INFRRFTSASDVWMFGVCMWEIL 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 31/220 (14%)
Query: 54 IGRGGFGTVYKGTLTN------GRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVE 106
IG G FG V++ +AVK L E+ ++ +F E ++ +PN+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLG--------------ATKANIK------LNWE 146
L+G C G L++EY+ L+ L +T+A + L+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITH 205
++ I +A G+A+L E VHRD+ N L+ + KI DFGL++ ++ +
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
A ++ PE + + T ++DV+++GV++ EI S
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 48/310 (15%)
Query: 46 DDFHLSNKIGRGGFGTVY--------KGTLTNGRRIAVKPLSAE-SKQGVREFITEIMTL 96
D L +G G FG V K +AVK L + +++ + + ++E+ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 97 SNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE--------- 146
+ +H N++ L+G C Q ++ Y +L L ++ +++
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 147 --KRSDICV-GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
K C +A+G+ +L + +HRD+ A N+L+ + KI DFGLA+ +I
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 204 THITTRIAGTTG-----YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
+I T G ++APE + T ++DV+SFGVL+ EI + G G
Sbjct: 208 NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT--LGGSPYPGIPV 265
Query: 259 KFLLEWAWQLHQEEKPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKML 318
+ L + + H+ +KP NE+ M+ C A S+RP Q+++ L
Sbjct: 266 EELFKLLKEGHRMDKPANCT---------NELYMMMRD---CWHAVPSQRPTFKQLVEDL 313
Query: 319 TKNIRLNEEE 328
+ + L E
Sbjct: 314 DRILTLTTNE 323
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 96/203 (47%), Gaps = 15/203 (7%)
Query: 52 NKIGRGGFGTV----YKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+++G+G FG+V Y N G +AVK L R+F EI L + +V+
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 107 LIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
G R LV EY+ + L L + +L+ + I KG+ +L
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLGS 129
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--YLAPEYV 222
VHRD+ A NIL++ E + KI DFGLAKL P + R G + + APE +
Sbjct: 130 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 223 LGGQLTMKADVYSFGVLVLEIIS 245
+ ++DV+SFGV++ E+ +
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 22/205 (10%)
Query: 50 LSNKIGRGGFGTVYKGTLTN----GRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNL 104
L IG G FG V++G + +A+K + VRE F+ E +T+ HP++
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHI 453
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANI---KLNWEKRSDICVG--IAKGL 159
V+LIG + I+ ++ LG ++ + K + + S I ++ L
Sbjct: 454 VKLIGVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
A+L + VHRDI A N+L+ K+GDFGL++ D+ + ++ ++AP
Sbjct: 505 AYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 220 EYVLGGQLTMKADVYSFGVLVLEII 244
E + + T +DV+ FGV + EI+
Sbjct: 562 ESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 8/210 (3%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVRE--FITEIMTLSNV 99
S +D+ + IG G +G K ++G+ + K L S + ++E+ L +
Sbjct: 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL 62
Query: 100 RHPNLVELIGCCVQGTRRIL--VYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
+HPN+V + T L V EY E L V+ TK L+ E + +
Sbjct: 63 KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTL 122
Query: 158 GLAFLHEELV--PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
L H ++HRD+K +N+ LD + N K+GDFGLA++ ++ GT
Sbjct: 123 ALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL-NHDEDFAKEFVGTPY 181
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
Y++PE + K+D++S G L+ E+ +
Sbjct: 182 YMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGR-RIAVKPLSAESKQ-GVREFITEIMTLSNVRHPN 103
DD+ L IG G V + ++A+K ++ E Q + E + EI +S HPN
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLL-----GATKANIKLNWEKRSDICVGIAKG 158
+V V LV + + S+ ++ G K+ + L+ + I + +G
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIATILREVLEG 133
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD--NITHITTR--IAGTT 214
L +LH+ +HRD+KA NILL ++ + +I DFG++ +IT R GT
Sbjct: 134 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 215 GYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 246
++APE + + KAD++SFG+ +E+ +G
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 193 PDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 193 PDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 16/213 (7%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGR-RIAVKPLSAESKQ-GVREFITEIMTLSNVRHPN 103
DD+ L IG G V + ++A+K ++ E Q + E + EI +S HPN
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLL-----GATKANIKLNWEKRSDICVGIAKG 158
+V V LV + + S+ ++ G K+ + L+ + I + +G
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGV-LDESTIATILREVLEG 128
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD--NITHITTR--IAGTT 214
L +LH+ +HRD+KA NILL ++ + +I DFG++ +IT R GT
Sbjct: 129 LEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 215 GYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 246
++APE + + KAD++SFG+ +E+ +G
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 117
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYL 217
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT YL
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 172
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 120
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYL 217
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT YL
Sbjct: 121 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 175
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + D + GV++ E++ GR
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVR 100
++ + +G G FG V T G+++A+K L+ QG E EI L +R
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HP++++L I+V EY N D ++ K++ ++ I +
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVE 117
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+ H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y APE
Sbjct: 118 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 172
Query: 221 YVLGGQLTM--KADVYSFGVLVLEIISGR 247
V+ G+L + DV+S GV++ ++ R
Sbjct: 173 -VISGKLYAGPEVDVWSCGVILYVMLCRR 200
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 202 PDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 202 PDXVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVR 100
++ + +G G FG V T G+++A+K L+ QG E EI L +R
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HP++++L I+V EY N D ++ K++ ++ I +
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVE 127
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+ H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y APE
Sbjct: 128 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 182
Query: 221 YVLGGQLTM--KADVYSFGVLVLEIISGR 247
V+ G+L + DV+S GV++ ++ R
Sbjct: 183 -VISGKLYAGPEVDVWSCGVILYVMLCRR 210
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 144
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 202 PDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVR 100
++ + +G G FG V T G+++A+K L+ QG E EI L +R
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HP++++L I+V EY N D ++ K++ ++ I +
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVE 126
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+ H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y APE
Sbjct: 127 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 181
Query: 221 YVLGGQLTM--KADVYSFGVLVLEIISGR 247
V+ G+L + DV+S GV++ ++ R
Sbjct: 182 -VISGKLYAGPEVDVWSCGVILYVMLCRR 209
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 21/209 (10%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNVR 100
++ + +G G FG V T G+++A+K L+ QG E EI L +R
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
HP++++L I+V EY N D ++ K++ ++ I +
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVE 121
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+ H IVHRD+K N+LLD+ N KI DFGL+ + D T+ G+ Y APE
Sbjct: 122 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE 176
Query: 221 YVLGGQLTM--KADVYSFGVLVLEIISGR 247
V+ G+L + DV+S GV++ ++ R
Sbjct: 177 -VISGKLYAGPEVDVWSCGVILYVMLCRR 204
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 117
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGYL 217
L +LH +V+RDIK N++LD++ + KI DFGL K D T T GT YL
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYL 172
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + D + GV++ E++ GR
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 135/303 (44%), Gaps = 52/303 (17%)
Query: 34 NHFSYTELRSATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPL--SAESKQGVREFI 90
H+ +T +D +IGRG +G+V K +G+ +AVK + + + K+ + +
Sbjct: 15 QHWDFT-----AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLM 69
Query: 91 TEIMTLSNVRHPNLVELIGC---------CVQ--GTRRILVYEYVENNSLDRVLLGATKA 139
+ + + P +V+ G C++ T Y+YV + LD V+
Sbjct: 70 DLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYV-YSVLDDVIPEEILG 128
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 199
I L K L L E L I+HRDIK SNILLD+ N K+ DFG++
Sbjct: 129 KITL----------ATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQ----LTMKADVYSFGVLVLEIISGRNSGKAMWG 255
D+I TR AG Y+APE + +++DV+S G+ + E+ +GR W
Sbjct: 177 VDSIAK--TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP-YPKWN 233
Query: 256 QMNKFLLEWAWQLHQEEK--PLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQ 313
+ QL Q K P +L + E E+ P+ ++ C S+RP+ +
Sbjct: 234 SVFD-------QLTQVVKGDPPQLSNSEEREFSPS----FINFVNLCLTKDESKRPKYKE 282
Query: 314 VIK 316
++K
Sbjct: 283 LLK 285
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTV-YKGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R ++F +G+G FG V GR A+K L E +K V +TE L
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N RHP L L R V EY L ++ + + ++ I
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEIVS 259
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGY 216
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T T GT Y
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 315
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 316 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 93/211 (44%), Gaps = 13/211 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTV-YKGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R ++F +G+G FG V GR A+K L E +K V +TE L
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N RHP L L R V EY L ++ + + ++ I
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEIVS 262
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGY 216
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T T GT Y
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEY 318
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 319 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 117
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGTTGY 216
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT Y
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEY 171
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 112/216 (51%), Gaps = 23/216 (10%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLS----AESKQGV-REFITEI 93
+++S + + +G G F TVYK N +I A+K + +E+K G+ R + EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 94 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL----LGATKANIKLNWEKRS 149
L + HPN++ L+ + LV++++E + L+ ++ L T ++IK
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD-LEVIIKDNSLVLTPSHIKA------ 116
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 209
+ +GL +LH+ I+HRD+K +N+LLD+ K+ DFGLAK F +
Sbjct: 117 -YMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQ 172
Query: 210 IAGTTGYLAPEYVLGGQLT-MKADVYSFGVLVLEII 244
+ T Y APE + G ++ + D+++ G ++ E++
Sbjct: 173 VV-TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 193 PDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 181
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 239 PDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 107/226 (47%), Gaps = 33/226 (14%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT------LTNGRRIAVKPLSAESKQGV-REFITEIMTLSN 98
D L +GRG FG V + R +AVK L + R ++E+ L +
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 99 V-RHPNLVELIGCCVQ-GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD------ 150
+ H N+V L+G C + G +++ E+ + +L L +K N + ++ +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYL--RSKRNEFVPYKVAPEDLYKDF 135
Query: 151 ------ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--- 199
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
PD + R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 193 PDYVRKGDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 117
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGTTGY 216
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT Y
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEY 171
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 31 RNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVK--PLSAESKQGVR 87
R+++ + LR F L +G G +G VYKG + G+ A+K ++ + ++ ++
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK 68
Query: 88 EFITEIMTLSNVRHPNLVELIGCCVQ------GTRRILVYEYVENNSLDRVLLGATKANI 141
+ I + S+ H N+ G ++ + LV E+ S+ ++ +
Sbjct: 69 QEINMLKKYSH--HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 142 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
K W + IC I +GL+ LH+ V +HRDIK N+LL + K+ DFG++
Sbjct: 127 KEEW--IAYICREILRGLSHLHQHKV---IHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQ-----LTMKADVYSFGVLVLEIISG 246
+ T I GT ++APE + + K+D++S G+ +E+ G
Sbjct: 182 TVGRRNTFI-GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNL 104
D + + ++G G FG V++ T G A K + + EI T+S +RHP L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
V L +++YE++ L + K++ ++ + + KGL +HE
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 165 ELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEY 221
+ VH D+K NI+ + + K+ DFGL A L P +TT GT + APE
Sbjct: 168 N---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 221
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
G + D++S GVL ++SG
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSG 246
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 66
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 122
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGTTGY 216
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT Y
Sbjct: 123 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEY 176
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 38/239 (15%)
Query: 41 LRSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
LR A+D F +G+G FG V K + R A+K + +++ + ++E+M L+++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 100 RHP-------------NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 146
H N V+ + + + + EY EN +L ++ N+ +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI---HSENLNQQRD 116
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--------- 197
+ + I + L+++H + I+HRD+K NI +D+ N KIGDFGLAK
Sbjct: 117 EYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 198 -----LFPDNITHITTRIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 250
P + ++T+ I GT Y+A E + G G K D+YS G++ E+I ++G
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 108/228 (47%), Gaps = 38/228 (16%)
Query: 48 FHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPL--SAESKQGVREFITEIMTLSNVR-HPN 103
+ L K+G+G +G V+K G +AVK + + ++ + EIM L+ + H N
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 104 LVELIGCCVQGTRR--ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
+V L+ R LV++Y+E + L +ANI L + + + K + +
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRANI-LEPVHKQYVVYQLIKVIKY 124
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI----------- 210
LH ++HRD+K SNILL+ E + K+ DFGL++ F NI +T I
Sbjct: 125 LHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRSFV-NIRRVTNNIPLSINENTENF 180
Query: 211 ----------AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGR 247
T Y APE +LG + T D++S G ++ EI+ G+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 46 DDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLSN 98
+DF +G+G FG V K T GR A+K L E +K V +TE L N
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
RHP L L R V EY L ++ + E+ I
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL---FFHLSRERV-FTEERARFYGAEIVSA 117
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--RIAGTTGY 216
L +LH +V+RDIK N++LD++ + KI DFGL K + I+ T GT Y
Sbjct: 118 LEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEY 171
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 172 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 38/239 (15%)
Query: 41 LRSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
LR A+D F +G+G FG V K + R A+K + +++ + ++E+M L+++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 100 RHP-------------NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 146
H N V+ + + + + EY EN +L ++ N+ +
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI---HSENLNQQRD 116
Query: 147 KRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK--------- 197
+ + I + L+++H + I+HRD+K NI +D+ N KIGDFGLAK
Sbjct: 117 EYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDIL 173
Query: 198 -----LFPDNITHITTRIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNSG 250
P + ++T+ I GT Y+A E + G G K D+YS G++ E+I ++G
Sbjct: 174 KLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V + +G +IAVK LS +S + E+ L +++H N++ L+
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
T E + L L+GA NI KL + + I +GL ++H
Sbjct: 119 FTPATS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 173
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 174 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 226
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
M D++S G ++ E+++GR
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 13/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNL 104
D + + ++G G FG V++ T G A K + + EI T+S +RHP L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
V L +++YE++ L + K++ ++ + + KGL +HE
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 165 ELVPHIVHRDIKASNILLDQEFNP--KIGDFGL-AKLFPDNITHITTRIAGTTGYLAPEY 221
+ VH D+K NI+ + + K+ DFGL A L P +TT GT + APE
Sbjct: 274 N---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEV 327
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
G + D++S GVL ++SG
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 181
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 73 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 128
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 223
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 69 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 124
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 125 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 181
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 182 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 219
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLT-NGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R + L + +G G FG V G G ++AVK L+ + S V + EI L
Sbjct: 7 RVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK 66
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
RHP++++L T +V EYV L + + E R + I
Sbjct: 67 LFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARR-LFQQILS 122
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
+ + H +V VHRD+K N+LLD N KI DFGL+ + D T+ G+ Y
Sbjct: 123 AVDYCHRHMV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYA 177
Query: 218 APEYVLGGQLTM--KADVYSFGVLVLEIISG 246
APE V+ G+L + D++S GV++ ++ G
Sbjct: 178 APE-VISGRLYAGPEVDIWSCGVILYALLCG 207
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 79 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 134
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 191
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 229
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AVK + + +++ E+ + + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 72
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 73 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 128
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 129 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWC 185
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 186 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 223
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 100/221 (45%), Gaps = 19/221 (8%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLT--NGRRIAV-----KPLSAESKQGVREFITEIMTLSNV 99
D L K+G G FG V +G +G+ ++V KP + + +FI E+ + ++
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 78
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
H NL+ L G + +++ + LDR L + + L S V +A+G+
Sbjct: 79 DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDR--LRKHQGHFLLG--TLSRYAVQVAEGM 134
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT--GYL 217
+L + +HRD+ A N+LL KIGDFGL + P N H + +
Sbjct: 135 GYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWC 191
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMN 258
APE + + +D + FGV + E+ + G+ W +N
Sbjct: 192 APESLKTRTFSHASDTWMFGVTLWEMFT---YGQEPWIGLN 229
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + GR +A+K + + +++ E+ + + HPN
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L L+ EY + L+ + K E RS I + + H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKFR-QIVSAVQYCH 128
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 129 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDTFCGSPPYAAPELFQ 183
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AVK + + +++ E+ + + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLT-NGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R D+F +G+G FG V + G AVK L + V +TE LS
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 98 NVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
R HP L +L C R V E+V L + + + + + + I
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL----MFHIQKSRRFDEARARFYAAEII 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTT 214
L FLH++ I++RD+K N+LLD E + K+ DFG+ K + I + T GT
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTP 188
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
Y+APE + D ++ GVL+ E++ G +A
Sbjct: 189 DYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK---------QGVREFITEI 93
AT + +IG G +GTVYK +G +A+K + + VRE + +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALL 65
Query: 94 MTLSNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKR 148
L HPN+V L+ C + R I LV+E+V+ + L L A L E
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETI 122
Query: 149 SDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT 208
D+ +GL FLH IVHRD+K NIL+ K+ DFGLA+++ + T
Sbjct: 123 KDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALT 177
Query: 209 RIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
+ T Y APE +L D++S G + E+
Sbjct: 178 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVR 100
R+ D L +G+G +G V++G+ G +AVK S+ + K RE TE+ +R
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLR 60
Query: 101 HPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
H N++ I + T+ L+ Y E SL L T + I + IA
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIA 115
Query: 157 KGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--- 208
GLA LH E+ P I HRD+K+ NIL+ + I D GLA + + +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 209 -RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 243
R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 176 PRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 50 LSNKIGRGGFGTVYKGTLT-NGRRIAVKPLSAE---SKQGVREFITEIMTLSNVRHPNLV 105
L + +G G FG V G G ++AVK L+ + S V + EI L RHP+++
Sbjct: 15 LGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHII 74
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L T +V EYV L + + E R + I + + H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVE---EMEARR-LFQQILSAVDYCHRH 130
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+V VHRD+K N+LLD N KI DFGL+ + D G+ Y APE V+ G
Sbjct: 131 MV---VHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VISG 184
Query: 226 QLTM--KADVYSFGVLVLEIISG 246
+L + D++S GV++ ++ G
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCG 207
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AV+ + + +++ E+ + + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 36/220 (16%)
Query: 43 SATDDFHLSNKIGRGGFGTVYKG--TLTNGRRIAVKPLSAE-SKQGVR-EFITEIMTLSN 98
++ D + K+G G +G VYK T+TN +A+K + E ++GV I E+ L
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTN-ETVAIKRIRLEHEEEGVPGTAIREVSLLKE 89
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK- 157
++H N++EL R L++EY EN ++K +K D+ + + K
Sbjct: 90 LQHRNIIELKSVIHHNHRLHLIFEYAEN-------------DLKKYMDKNPDVSMRVIKS 136
Query: 158 -------GLAFLHEELVPHIVHRDIKASNILL---DQEFNP--KIGDFGLAKLFPDNITH 205
G+ F H +HRD+K N+LL D P KIGDFGLA+ F I
Sbjct: 137 FLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQ 193
Query: 206 ITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
T I T Y PE +LG + + D++S + E++
Sbjct: 194 FTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AVK + + +++ E+ + + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII-----G 105
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANI-KLNWEKRSDICV---GIAKGLAFLHEELV 167
+ R E +++ L L+GA + K IC I +GL ++H
Sbjct: 106 INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 163
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGG 225
+++HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L
Sbjct: 164 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 226 Q-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
+ T D++S G ++ E++S R GK Q+N L
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 34 NHFSYTELRSATDDF---------HLSNKIGRGGFGTVYKGTLTN------GRRIAVKPL 78
N + Y + R D +G G FG V T ++AVK L
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83
Query: 79 SAESKQGVRE-FITEIMTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGA 136
++ RE ++E+ ++ + H N+V L+G C L++EY L L
Sbjct: 84 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 137 ----TKANIKLNWEKRSD-------------ICVG--IAKGLAFLHEELVPHIVHRDIKA 177
++ I+ +KR + +C +AKG+ FL VHRD+ A
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAA 200
Query: 178 SNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TGYLAPEYVLGGQLTMKADVYSF 236
N+L+ KI DFGLA+ + ++ A ++APE + G T+K+DV+S+
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 237 GVLVLEIIS 245
G+L+ EI S
Sbjct: 261 GILLWEIFS 269
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQ------GVREFITEIMTL 96
AT + +IG G +GTVYK +G +A+K + + + VRE + + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRRL 60
Query: 97 SNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 151
HPN+V L+ C + R I LV+E+V+ + L L A L E D+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKDL 117
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVV 172
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
T Y APE +L D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQ------GVREFITEIMTL 96
AT + +IG G +GTVYK +G +A+K + + + VRE + + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRRL 60
Query: 97 SNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 151
HPN+V L+ C + R I LV+E+V+ + L L A L E D+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKDL 117
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV- 173
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
T Y APE +L D++S G + E+
Sbjct: 174 -TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + GR +A+K + + +++ E+ + + HPN
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L L+ EY + L+ + K E RS I + + H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK---EARSKF-RQIVSAVQYCH 131
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 132 QK---RIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPELFQ 186
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG 210
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 47 DFHLSN-----KIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSN 98
D H+ N IG+G F V + G+ +AVK + + +++ E+ +
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKV 62
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG---I 155
+ HPN+V+L LV EY + L+ W K + I
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH-------GWMKEKEARAKFRQI 115
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ + H++ IVHRD+KA N+LLD + N KI DFG + F + G+
Sbjct: 116 VSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPP 170
Query: 216 YLAPEYVLGGQLT-MKADVYSFGVLVLEIISG 246
Y APE G + + DV+S GV++ ++SG
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 25 VDGELLRNVNHFSYTELRSATDDFHLSNKI-GRGGFGTVYKGTL-TNGRRIAVKPLSAES 82
+D + + + E + +D+ L ++ GRGGFG V+ + G+ A K L+ +
Sbjct: 163 LDSKYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR 222
Query: 83 KQ---GVREFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKA 139
+ G + + E L+ V +V L T LV + + + +
Sbjct: 223 LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDED 282
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF 199
N + I GL LH+ +I++RD+K N+LLD + N +I D GLA
Sbjct: 283 NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVEL 339
Query: 200 PDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
T T AGT G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 340 KAGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AV+ + + +++ E+ + + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G+ Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQ------GVREFITEIMTL 96
AT + +IG G +GTVYK +G +A+K + + + VRE + + L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRRL 60
Query: 97 SNVRHPNLVELIGCCV--QGTRRI---LVYEYVENNSLDRVLLGATKANIKLNWEKRSDI 151
HPN+V L+ C + R I LV+E+V+ + L L A L E D+
Sbjct: 61 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-LRTYLDKAPPPG--LPAETIKDL 117
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIA 211
+GL FLH IVHRD+K NIL+ K+ DFGLA+++ + +
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALDPVV 172
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
T Y APE +L D++S G + E+
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTV-YKGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R ++F +G+G FG V GR A+K L E +K V +TE L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N RHP L L R V EY L ++ + + ++ I
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEIVS 120
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGY 216
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT Y
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 176
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 177 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTV-YKGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R ++F +G+G FG V GR A+K L E +K V +TE L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N RHP L L R V EY L ++ + + ++ I
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEIVS 121
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGY 216
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT Y
Sbjct: 122 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 177
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 178 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 13/211 (6%)
Query: 42 RSATDDFHLSNKIGRGGFGTV-YKGTLTNGRRIAVKPLSAE---SKQGVREFITEIMTLS 97
R ++F +G+G FG V GR A+K L E +K V +TE L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N RHP L L R V EY L ++ + + ++ I
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGEL---FFHLSRERV-FSEDRARFYGAEIVS 119
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL-FPDNITHITTRIAGTTGY 216
L +LH E ++V+RD+K N++LD++ + KI DFGL K D T GT Y
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEY 175
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
LAPE + D + GV++ E++ GR
Sbjct: 176 LAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 35 HFSYTELRSATDDFHLSNKI-GRGGFGTVYKGTL-TNGRRIAVKPLSAESKQ---GVREF 89
+ + E + +D+ L ++ GRGGFG V+ + G+ A K L+ + + G +
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 90 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 149
+ E L+ V +V L T LV + + + + N +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 209
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKG 348
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
AGT G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 147 HRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 35 HFSYTELRSATDDFHLSNKI-GRGGFGTVYKGTL-TNGRRIAVKPLSAESKQ---GVREF 89
+ + E + +D+ L ++ GRGGFG V+ + G+ A K L+ + + G +
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 90 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 149
+ E L+ V +V L T LV + + + + N +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 209
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKG 348
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
AGT G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 116/244 (47%), Gaps = 19/244 (7%)
Query: 50 LSNKIGRGGFGTVYKGTLTN----GRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
L +G G FG+V +G L ++AVK + + S++ + EF++E + + HPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 104 LVELIGCCVQGTRR-----ILVYEYVENNSLDRVLLGA--TKANIKLNWEKRSDICVGIA 156
++ L+G C++ + + +++ +++ L LL + + + V IA
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT-TG 215
G+ +L + +HRD+ A N +L + + DFGL+K + RIA
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPL 275
++A E + T K+DV++FGV + EI + + G N + ++ H+ ++P
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYP--GVQNHEMYDYLLHGHRLKQPE 272
Query: 276 ELVD 279
+ +D
Sbjct: 273 DCLD 276
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 9/223 (4%)
Query: 35 HFSYTELRSATDDFHLSNKI-GRGGFGTVYKGTL-TNGRRIAVKPLSAESKQ---GVREF 89
+ + E + +D+ L ++ GRGGFG V+ + G+ A K L+ + + G +
Sbjct: 173 QWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGA 232
Query: 90 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRS 149
+ E L+ V +V L T LV + + + + N +
Sbjct: 233 MVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 209
I GL LH+ +I++RD+K N+LLD + N +I D GLA T T
Sbjct: 293 FYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKG 348
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKA 252
AGT G++APE +LG + D ++ GV + E+I+ R +A
Sbjct: 349 YAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRA 391
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 16/209 (7%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAE---SKQGVREFITEIMTLSNVRH 101
D F + IG+G FG V + +++ A+K ++ + + VR E+ + + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV L +V + + L L + N+ E + L +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDY 130
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + I+HRD+K NILLD+ + I DF +A + P T ITT +AGT Y+APE
Sbjct: 131 LQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEM 185
Query: 222 V---LGGQLTMKADVYSFGVLVLEIISGR 247
G + D +S GV E++ GR
Sbjct: 186 FSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 88/203 (43%), Gaps = 27/203 (13%)
Query: 53 KIGRGGFGTVYKGTLTNGR------RIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVE 106
+IGRG F TVYKG T + + L+ +Q +E E L ++HPN+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 107 LIG---CCVQGTRRI-LVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAKGLA 160
V+G + I LV E + +L L K + +W C I KGL
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW------CRQILKGLQ 143
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
FLH P I+HRD+K NI + KIGD GLA L + GT + AP
Sbjct: 144 FLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAP 199
Query: 220 EYVLGGQLTMKADVYSFGVLVLE 242
E + DVY+FG LE
Sbjct: 200 E-XYEEKYDESVDVYAFGXCXLE 221
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKCQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 92
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 54 IGRGGFGTVYK-GTLTNGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGC 110
+G+G FG V K + AVK ++ S + + E+ L + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 111 CVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ +V E Y D ++ + + + I + G+ ++H+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 170 IVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
IVHRD+K NILL +++ + KI DFGL+ F N T + RI GT Y+APE VL G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 227 LTMKADVYSFGVLVLEIISG 246
K DV+S GV++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 151
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 144
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVE----L 107
IG G +G V R+A+K +S E + + + EI L RH N++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
++ R + + + + L ++L +N + + I +GL ++H
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSA-- 163
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAPEYVLGG 225
+++HRD+K SN+L++ + KI DFGLA++ H T T Y APE +L
Sbjct: 164 -NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 226 Q-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
+ T D++S G ++ E++S R GK Q+N L
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 152
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 213 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 143
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 204 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 144
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 205 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 98
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 99 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 154
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 215 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 90
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 91 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 207 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 97/205 (47%), Gaps = 14/205 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPL--SAESKQGV-REFITEIMTLSNVRH 101
DDF + +G+G FG VY I A+K L S K+GV + EI +++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN++ L R L+ EY L + L + + + ++ + I +A L +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY 138
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
H + V +HRDIK N+LL + KI DFG + P ++ T + GT YL PE
Sbjct: 139 CHGKKV---IHRDIKPENLLLGLKGELKIADFGWSVHAP-SLRRKT--MCGTLDYLPPEM 192
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ G K D++ GVL E++ G
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 110
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 111 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 166
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 227 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQG-VREFITEIMTLSNVR 100
R+ L +G+G +G V++G L +G +AVK S+ +Q RE TEI +R
Sbjct: 4 RTVARQVALVECVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLR 60
Query: 101 HPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGAT-KANIKLNWEKRSDICVGI 155
H N++ I + T+ L+ Y E+ SL L T + ++ L + V
Sbjct: 61 HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALR------LAVSA 114
Query: 156 AKGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHI---- 206
A GLA LH E+ P I HRD K+ N+L+ I D GLA + ++
Sbjct: 115 ACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGN 174
Query: 207 TTRIAGTTGYLAPEYVLGGQLTMKA-------DVYSFGVLVLEI 243
R+ GT Y+APE VL Q+ D+++FG+++ EI
Sbjct: 175 NPRV-GTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 10/202 (4%)
Query: 48 FHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAES-KQGVREFITEIMTLSNVRHPNLV 105
+ L IG GGF V + G +A+K + + + TEI L N+RH ++
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 106 ELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+L + +V EY L ++ + L+ E+ + I +A++H +
Sbjct: 72 QLYHVLETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQ 127
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG- 224
HRD+K N+L D+ K+ DFGL N + G+ Y APE + G
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 225 GQLTMKADVYSFGVLVLEIISG 246
L +ADV+S G+L+ ++ G
Sbjct: 185 SYLGSEADVWSMGILLYVLMCG 206
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 43/230 (18%)
Query: 47 DFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNL 104
DF +GRGGFG V++ + A+K + +++ RE + E+ L+ + HP +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 105 VELIGCCVQG--TRRIL-----VYEYVENNSLDRVLLGATKANIKLNW--------EKRS 149
V ++ T ++ VY Y++ + K N+K +W E+
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQ-------MQLCRKENLK-DWMNGRCTIEERER 117
Query: 150 DICV----GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
+C+ IA+ + FLH + ++HRD+K SNI + K+GDFGL +
Sbjct: 118 SVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 206 IT-----------TRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
T T GT Y++PE + G + K D++S G+++ E++
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 54 IGRGGFGTVYK-GTLTNGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGC 110
+G+G FG V K + AVK ++ S + + E+ L + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 111 CVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ +V E Y D ++ + + + I + G+ ++H+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 170 IVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
IVHRD+K NILL +++ + KI DFGL+ F N T + RI GT Y+APE VL G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 227 LTMKADVYSFGVLVLEIISG 246
K DV+S GV++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 99/200 (49%), Gaps = 18/200 (9%)
Query: 54 IGRGGFGTVYK-GTLTNGRRIAVKPLSAES--KQGVREFITEIMTLSNVRHPNLVELIGC 110
+G+G FG V K + AVK ++ S + + E+ L + HPN+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 111 CVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ +V E Y D ++ + + + I + G+ ++H+ +
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII-----KRKRFSEHDAARIIKQVFSGITYMHKH---N 141
Query: 170 IVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
IVHRD+K NILL +++ + KI DFGL+ F N T + RI GT Y+APE VL G
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGT 198
Query: 227 LTMKADVYSFGVLVLEIISG 246
K DV+S GV++ ++SG
Sbjct: 199 YDEKCDVWSAGVILYILLSG 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 27/211 (12%)
Query: 53 KIGRGGFGTVYKGTLTNGR-RIAVKPLS---------AESKQGVREF----ITEIMTLSN 98
K+G G +G V NG A+K + ++ + + +F EI L +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
+ HPN+++L LV E+ E L ++ K + ++I I G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANIMKQILSG 158
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQE---FNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ +LH+ +IVHRDIK NILL+ + N KI DFGL+ F + + R+ GT
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTAY 213
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE VL + K DV+S GV++ ++ G
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDII 92
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 93 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 209 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKGTL-----TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + A E + E + + +P +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKGTL-----TNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + A E + E + + +P +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 146
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 147 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 205
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 206 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 244
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 13/204 (6%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPN 103
++ L IG+G F V + G+ +AVK + + +++ E+ + HPN
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
+V+L LV EY + L+ + K E R+ I + + H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK---EARAKFR-QIVSAVQYCH 130
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
++ IVHRD+KA N+LLD + N KI DFG + F + G Y APE
Sbjct: 131 QKF---IVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQ 185
Query: 224 GGQLT-MKADVYSFGVLVLEIISG 246
G + + DV+S GV++ ++SG
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG 209
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVR 100
R+ L +G+G +G V++G+ G +AVK S+ + K RE TE+ +R
Sbjct: 4 RTVAHQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLR 60
Query: 101 HPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
H N++ I + T+ L+ Y E SL L T + I + IA
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIA 115
Query: 157 KGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--- 208
GLA LH E+ P I HRD+K+ NIL+ + I D GLA + + +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 209 -RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 243
R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 176 PRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 489
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 490 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 549 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 587
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 144
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 145 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 203
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 204 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 242
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 488
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 489 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 548 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 17/246 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRH 101
DD ++GRG +G V K + +G+ +AVK + A S++ R + +++ V
Sbjct: 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 109
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P V G + + E + + SLD+ + + I V I K L
Sbjct: 110 PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 168
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +L ++HRD+K SN+L++ K+ DFG++ D++ T AG Y+APE
Sbjct: 169 LHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPER 224
Query: 222 V---LGGQ-LTMKADVYSFGVLVLEIISGRNSGKAMWG----QMNKFLLEWAWQLHQEEK 273
+ L + ++K+D++S G+ ++E+ R + WG Q+ + + E + QL ++
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-WGTPFQQLKQVVEEPSPQLPADKF 283
Query: 274 PLELVD 279
E VD
Sbjct: 284 SAEFVD 289
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A++ +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 136
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 137 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 195
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 196 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 234
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 189
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 126
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 127 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 185
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 186 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 224
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 124
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT--TGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K + + + G + APE +
Sbjct: 125 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 183
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 184 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 222
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 18/207 (8%)
Query: 48 FHLSNKIGRGGFGTVY---KGTLTNGRRIAVKPLSAESKQGVREFITEIM---TLSNVRH 101
F L +G+G FG V+ K + ++ R++ + ++ VR+ + M L V H
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNH 85
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P +V+L + L+ +++ L + E +A L
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGTTGYLAP 219
LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT Y+AP
Sbjct: 142 LHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAP 195
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISG 246
E V T AD +SFGVL+ E+++G
Sbjct: 196 EVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 100 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 154
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 155 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 207
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGTLTNGRR-IAVKPLSAE-SKQGVREFITEIMTLSNVRHP 102
+D F + +++GRG VY+ ++ A+K L K+ VR TEI L + HP
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVR---TEIGVLLRLSHP 108
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+++L T LV E V L DR++ + +D I + +A+
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE-----RDAADAVKQILEAVAY 163
Query: 162 LHEELVPHIVHRDIKASNILLDQ---EFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
LHE IVHRD+K N+L + KI DFGL+K+ + T + GT GY A
Sbjct: 164 LHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYCA 218
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE + G + D++S G++ ++ G
Sbjct: 219 PEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 53 KIGRGGFGTVYKG-----TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL 107
++G G FGTV KG + + + A E + E + + +P +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 108 IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
IG C + +LV E E L++ L + N + + ++ ++ G+ +L E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL----QQNRHVKDKNIIELVHQVSMGMKYLEES-- 130
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLF--PDNITHITTRIAGTTGYLAPEYVLGG 225
+ VHRD+ A N+LL + KI DFGL+K +N T + APE +
Sbjct: 131 -NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYY 189
Query: 226 QLTMKADVYSFGVLVLEIIS-GRNSGKAMWGQMNKFLLE 263
+ + K+DV+SFGVL+ E S G+ + M G +LE
Sbjct: 190 KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 228
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 94
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L C + Y +N L + + +G+ + I
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 148
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 149 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNA 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
IG G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 42 RSATDDFHLSNKIGRGGFGTVY---KGTLTNGRRIAVKPLSAESKQGVREFITEIM---T 95
++ F L +G+G FG V+ K + ++ R++ + ++ VR+ + M
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L V HP +V+L + L+ +++ L + E +
Sbjct: 80 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 135
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 213
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 136 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 189
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 42 RSATDDFHLSNKIGRGGFGTVY---KGTLTNGRRIAVKPLSAESKQGVREFITEIM---T 95
++ F L +G+G FG V+ K + ++ R++ + ++ VR+ + M
Sbjct: 21 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 80
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L V HP +V+L + L+ +++ L + E +
Sbjct: 81 LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAEL 136
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAGT 213
A L LH I++RD+K NILLD+E + K+ DFGL+K ++I H GT
Sbjct: 137 ALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGT 190
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE V T AD +SFGVL+ E+++G
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 109 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSA-ESKQGVREFITEIMTLSNVR 100
R+ L +G+G +G V++G+ G +AVK S+ + K RE TE+ +R
Sbjct: 33 RTVARQITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRE--TELYNTVMLR 89
Query: 101 HPNLVELIGCCV----QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
H N++ I + T+ L+ Y E SL L T + I + IA
Sbjct: 90 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIA 144
Query: 157 KGLAFLHEELV-----PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITT--- 208
GLA LH E+ P I HRD+K+ NIL+ + I D GLA + + +
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 204
Query: 209 -RIAGTTGYLAPEYVLGGQLTM-------KADVYSFGVLVLEI 243
R+ GT Y+APE VL + + + D+++FG+++ E+
Sbjct: 205 PRV-GTKRYMAPE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T Y APE +L + T
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 11/215 (5%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA-ESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
IG G +G V N R+A+K +S E + + + EI L RH N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIV 171
T + Y+ + ++ L K L+ + I +GL ++H +++
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYKLLKTQ-HLSNDHICYFLYQILRGLKYIHSA---NVL 151
Query: 172 HRDIKASNILLDQEFNPKIGDFGLAKLF-PD-NITHITTRIAGTTGYLAPEYVLGGQ-LT 228
HRD+K SN+LL+ + KI DFGLA++ PD + T T Y APE +L + T
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 229 MKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
D++S G ++ E++S R GK Q+N L
Sbjct: 212 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 101 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 154
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 155 -ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 96 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 -ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 117/246 (47%), Gaps = 17/246 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRH 101
DD ++GRG +G V K + +G+ +AVK + A S++ R + +++ V
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDC 65
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P V G + + E + + SLD+ + + I V I K L
Sbjct: 66 PFTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 124
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +L ++HRD+K SN+L++ K+ DFG++ D++ AG Y+APE
Sbjct: 125 LHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPER 180
Query: 222 V---LGGQ-LTMKADVYSFGVLVLEIISGRNSGKAMWG----QMNKFLLEWAWQLHQEEK 273
+ L + ++K+D++S G+ ++E+ R + WG Q+ + + E + QL ++
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDS-WGTPFQQLKQVVEEPSPQLPADKF 239
Query: 274 PLELVD 279
E VD
Sbjct: 240 SAEFVD 245
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 95 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 89 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 143
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 144 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 196
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 97 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 151
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 152 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 204
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 147 --DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 87 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 102 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 156
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 157 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 92 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 101 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 156 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 95/212 (44%), Gaps = 15/212 (7%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAE---SKQGVREFITEIMTLS 97
R DF+ +G+G FG V + A+K L + V + E L+
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 98 NVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
+ P + + C Q R+ V EYV L + + K + I+
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL----MYHIQQVGKFKEPQAVFYAAEIS 130
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR-IAGTTG 215
GL FLH+ I++RD+K N++LD E + KI DFG+ K + +TTR GT
Sbjct: 131 IGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTPD 185
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
Y+APE + D +++GVL+ E+++G+
Sbjct: 186 YIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 113 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 167
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 168 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 220
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 87 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVL 223
I+HRD+K SN+ ++++ KI DFGLA+ H +AG T Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 195
Query: 224 GG-QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVL 223
I+HRD+K SN+ ++++ KI DFGLA+ H +AG T Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 195
Query: 224 GG-QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 88 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 142
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 143 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 195
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 109 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D +T ++ TR Y APE +L
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 47 DFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAES---KQGVREFITEI-MTLSNVRH 101
DFH IG+G FG V AVK L ++ K+ + ++E + L NV+H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSL------DRVLLGATKANIKLNWEKRSDICVG- 154
P LV L + V +Y+ L +R L E R+
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFL-----------EPRARFYAAE 147
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH--ITTRIAG 212
IA L +LH +IV+RD+K NILLD + + + DFGL K +NI H T+ G
Sbjct: 148 IASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCG 201
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG------RNSGKAMWGQMNKFL 261
T YLAPE + D + G ++ E++ G RN+ + +NK L
Sbjct: 202 TPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL 256
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 52 NKIGRGGFGTVYKGT--LTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELI 108
+K+G G + TVYKG LT+ +A+K + E ++G I E+ L +++H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 109 GCCVQGTRRILVYEYVENN---SLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
LV+EY++ + LD N+KL + +GLA+ H +
Sbjct: 67 DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL-------FLFQLLRGLAYCHRQ 119
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGL--AKLFPDNITHITTRIAGTTGYLAPEYVL 223
++HRD+K N+L+++ K+ DFGL AK P T T Y P+ +L
Sbjct: 120 ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIP---TKTYDNEVVTLWYRPPDILL 173
Query: 224 GG-QLTMKADVYSFGVLVLEIISGR 247
G + + D++ G + E+ +GR
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 19/202 (9%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG- 225
I+HRD+K SN+ ++++ KI DFGLA+ D + T T Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----TGXVATRWYRAPEIMLNWM 198
Query: 226 QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 25/205 (12%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 86 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYVL 223
I+HRD+K SN+ ++++ KI DFGLA+ H +AG T Y APE +L
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 191
Query: 224 GG-QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTNGR----RIAVKPLSAE--SKQGVREFITEIMTLSNVRH 101
F L +G+G FG+V + L ++AVK L A+ + + EF+ E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 102 PNLVELIGCCVQGTRR------ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDI--CV 153
P++ +L+G ++ + +++ ++++ L LL + N ++ + V
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAG 212
IA G+ +L + +HRD+ A N +L ++ + DFGL+ K++ +
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
+LA E + T+ +DV++FGV + EI++
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Query: 54 IGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G G FG V T +++A+K +S + K + + EI L +RHP++++L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
T ++V EY D ++ ++ ++ I + + H
Sbjct: 77 VITTPTDIVMVIEYAGGELFDYIV-----EKKRMTEDEGRRFFQQIICAIEYCHRH---K 128
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
IVHRD+K N+LLD N KI DFGL+ + D T+ G+ Y APE V+ G+L
Sbjct: 129 IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VINGKLYA 185
Query: 230 --KADVYSFGVLVLEIISGR 247
+ DV+S G+++ ++ GR
Sbjct: 186 GPEVDVWSCGIVLYVMLVGR 205
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI D+GLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAES---KQGVREFITEIMTLSN 98
D + + +G G F V L +R +A+K ++ E+ K+G E EI L
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN+V L G L+ + V L DR++ S + +
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLD 127
Query: 158 GLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + + GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GY+APE + + D +S GV+ ++ G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAES---KQGVREFITEIMTLSN 98
D + + +G G F V L +R +A+K ++ E+ K+G E EI L
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN+V L G L+ + V L DR++ S + +
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLD 127
Query: 158 GLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + + GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GY+APE + + D +S GV+ ++ G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 119 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAG 202
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 14/205 (6%)
Query: 48 FHLSNKIGRGGFGTVY---KGTLTNGRRIAVKPLSAESKQGVREFITEIM---TLSNVRH 101
F L +G+G FG V+ K T + + + ++ VR+ + M L++V H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P +V+L + L+ +++ L + E +A GL
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH I++RD+K NILLD+E + K+ DFGL+K D+ + GT Y+APE
Sbjct: 146 LHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-FCGTVEYMAPEV 201
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
V + AD +S+GVL+ E+++G
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 121 LHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 26/212 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSAES---KQGVREFITEIMTLSN 98
D + + +G G F V L +R +A+K ++ E+ K+G E EI L
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHK 72
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN+V L G L+ + V L DR++ S + +
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLD 127
Query: 158 GLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + + GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GY+APE + + D +S GV+ ++ G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G +G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 28 ELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGV 86
E L+ V++ E+ AT ++GRG FG V++ G + AVK + E +
Sbjct: 60 EKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA- 114
Query: 87 REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 146
E+M + + P +V L G +G + E +E SL +++ K L E
Sbjct: 115 ----EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-E 165
Query: 147 KRSDICVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNI 203
R+ +G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 166 DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 222
Query: 204 TH---ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 223 GKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGL + D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 28 ELLRNVNHFSYTELRSATDDFHLSNKIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGV 86
E L+ V++ E+ AT ++GRG FG V++ G + AVK + E +
Sbjct: 79 EKLKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA- 133
Query: 87 REFITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWE 146
E+M + + P +V L G +G + E +E SL +++ K L E
Sbjct: 134 ----EELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLV----KEQGCLP-E 184
Query: 147 KRSDICVGIA-KGLAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLA-KLFPDNI 203
R+ +G A +GL +LH I+H D+KA N+LL + + + DFG A L PD +
Sbjct: 185 DRALYYLGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGL 241
Query: 204 TH---ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
I GT ++APE VLG K DV+S ++L +++G
Sbjct: 242 GKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTNGR--------RIAVKPLSAESKQGVREFITEIMTLSNV 99
F L +G+GG+G V++ G ++ K + + + E L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+HP +V+LI G + L+ EY+ L + + I + + I+ L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEISMAL 134
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT Y+AP
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAP 190
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISG 246
E ++ D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 111/241 (46%), Gaps = 42/241 (17%)
Query: 41 LRSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNV 99
LR A+D F +G+G FG V K + R A+K + +++ + ++E+ L+++
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 100 RHPNLVELIGCCVQGTRRILV---------------YEYVENNSLDRVLLGATKANIKLN 144
H +V ++ RR V EY EN +L ++ N+
Sbjct: 60 NHQYVVRYYAAWLE--RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI---HSENLNQQ 114
Query: 145 WEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK------- 197
++ + I + L+++H + I+HR++K NI +D+ N KIGDFGLAK
Sbjct: 115 RDEYWRLFRQILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLD 171
Query: 198 -------LFPDNITHITTRIAGTTGYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRNS 249
P + ++T+ I GT Y+A E + G G K D YS G++ E I ++
Sbjct: 172 ILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFST 230
Query: 250 G 250
G
Sbjct: 231 G 231
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 19/202 (9%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 110 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG- 225
I+HRD+K SN+ ++++ KI DFGLA+ D + T Y APE +L
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM----XGXVATRWYRAPEIMLNWM 218
Query: 226 QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
R L E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPA--RSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 143
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DF LA+ D +T ++ TR Y APE +L
Sbjct: 144 -ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 16/207 (7%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTNGR--------RIAVKPLSAESKQGVREFITEIMTLSNV 99
F L +G+GG+G V++ G ++ K + + + E L V
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+HP +V+LI G + L+ EY+ L + + I + + I+ L
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFME-DTACFYLAEISMAL 134
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAP 219
LH++ I++RD+K NI+L+ + + K+ DFGL K + T +T GT Y+AP
Sbjct: 135 GHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAP 190
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISG 246
E ++ D +S G L+ ++++G
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 113 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS-- 166
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI DFGLA+ D + ++ TR Y APE +L
Sbjct: 167 -ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNW 220
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 26/212 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR----IAVKPLSA---ESKQGVREFITEIMTLSN 98
D + + +G G F V L +R +A+K ++ E K+G E EI L
Sbjct: 18 DIYDFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHK 72
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN+V L G L+ + V L DR++ S + +
Sbjct: 73 IKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE-----RDASRLIFQVLD 127
Query: 158 GLAFLHEELVPHIVHRDIKASNIL---LDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH+ IVHRD+K N+L LD++ I DFGL+K+ ++ + + GT
Sbjct: 128 AVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GY+APE + + D +S GV+ ++ G
Sbjct: 183 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 66
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 120
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 121 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 178 VSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 67
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 121
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K ++ EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 65
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 119
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 120 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 177 VSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 64
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 118
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 119 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 176 VSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 43 SATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH 101
S D + + ++G G FG V++ GR K ++ EI ++ + H
Sbjct: 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH 107
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLA 160
P L+ L +L+ E++ L DR+ + K++ + + +GL
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQACEGLK 163
Query: 161 FLHEELVPHIVHRDIKASNILLD--QEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYL 217
+HE IVH DIK NI+ + + + KI DFGLA KL PD I +TT T +
Sbjct: 164 HMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFA 217
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
APE V + D+++ GVL ++SG
Sbjct: 218 APEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 140
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 144
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V +G ++A+K LS +S+ + E++ L +++H N++ L+
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 111 CVQGTRRILVYEY-----VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+ Y++ L +++ +K + EK + + KGL ++H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIM------GLKFSEEKIQYLVYQMLKGLKYIHS- 144
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYV 222
+VHRD+K N+ ++++ KI DFGLA+ H + G T Y APE +
Sbjct: 145 --AGVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVI 195
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
L D++S G ++ E+++G+ GK Q+ + L
Sbjct: 196 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 141
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 141
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 140
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 141 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 198 VSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 144
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 145 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 202 VSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 141
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLS-AESKQGV-REFITEIMTLSNVRHPNLVELIG 109
KIG G +GTV+K I A+K + + +GV + EI L ++H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ LV+E+ + + L + N L+ E + KGL F H +
Sbjct: 69 VLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL-T 228
++HRD+K N+L+++ K+ DFGLA+ F + + + T Y P+ + G +L +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 229 MKADVYSFGVLVLEIISG 246
D++S G + E+ +
Sbjct: 181 TSIDMWSAGCIFAELANA 198
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 71
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 126 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 183 VSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 53 KIGRGGFGTVY--KGTLTNGRR-IAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIG 109
K+G G +G V + +T+ R I + ++ S + + E+ L + HPN+++L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 110 CCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
LV E + L D ++ +K N + I + G+ +LH+
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEII-----HRMKFNEVDAAVIIKQVLSGVTYLHKH--- 155
Query: 169 HIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGG 225
+IVHRD+K N+LL+ + KI DFGL+ +F +N + R+ GT Y+APE VL
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRK 212
Query: 226 QLTMKADVYSFGVLVLEIISG 246
+ K DV+S GV++ +++G
Sbjct: 213 KYDEKCDVWSIGVILFILLAG 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI FGLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 248
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGT-VYKGTLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F T V L R A+K L E + ++E ++T E +S +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 141
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 142 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 199 VSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI D GLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 109/244 (44%), Gaps = 25/244 (10%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPL--SAESKQGVREFITEIMTLSN 98
++ +D ++G G G V+K G IAVK + S ++ R + + L +
Sbjct: 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS 80
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVEN--NSLDRVLLGATKANIKLNWEKRSDICVGIA 156
P +V+ G + T + E + L + + G I + V I
Sbjct: 81 HDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERI------LGKMTVAIV 134
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGY 216
K L +L E+ ++HRD+K SNILLD+ K+ DFG++ D+ R AG Y
Sbjct: 135 KALYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAY 190
Query: 217 LAPEYVLGGQLT-----MKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQE 271
+APE + T ++ADV+S G+ ++E+ +G+ K K E ++ QE
Sbjct: 191 MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC-----KTDFEVLTKVLQE 245
Query: 272 EKPL 275
E PL
Sbjct: 246 EPPL 249
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
I GL LH E IV+RD+K NILLD + +I D GLA P+ T I R+ GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN 248
GY+APE V + T D ++ G L+ E+I+G++
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQS 383
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 92
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 146
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 147 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 204 VSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE----FIT-EIMTLSNV 99
+DF +G G F TV L R A+K L E + ++E ++T E +S +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVL--LGATKANIKLNWEKRSDICVGIAK 157
HP V+L + Y +N L + + +G+ + I
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFY------TAEIVS 143
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAK-LFPDNITHITTRIAGTTGY 216
L +LH + I+HRD+K NILL+++ + +I DFG AK L P++ GT Y
Sbjct: 144 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++PE + +D+++ G ++ ++++G
Sbjct: 201 VSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRHP 102
+D+ L +G G G V +AVK + + E I EI + H
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+V+ G +G + L EY L DR+ + +I + + G+ +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-----EPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFP-DNITHITTRIAGTTGYLAPE 220
LH I HRDIK N+LLD+ N KI DFGLA +F +N + ++ GT Y+APE
Sbjct: 120 LHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 221 YVLGGQLTMK-ADVYSFGVLVLEIISG 246
+ + + DV+S G+++ +++G
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG 203
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKGT-----LTNGRRIAVKPLSAESKQGV--REFITEIMTLSN 98
D + + ++G G F V K L + K S S++GV E E+ L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQ 71
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V HPN++ L T +L+ E V L L A K + L+ E+ + I G
Sbjct: 72 VLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQILDG 127
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH I H D+K NI+L + P K+ DFGLA D + I GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI D GLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVY--KGTLTNGRRIAVKPLS---AESKQGVREFITEIMTLSNV 99
+D + +G+G FG V K +T G+ AVK +S + K + E+ L +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 100 RHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
HPN+++L LV E Y D ++ + + + + I + G
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSG 144
Query: 159 LAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I GT
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAY 199
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE VL G K DV+S GV++ ++SG
Sbjct: 200 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 15/206 (7%)
Query: 53 KIGRGGFGTVYKGTLTNGRRI-AVKPLS-AESKQGV-REFITEIMTLSNVRHPNLVELIG 109
KIG G +GTV+K I A+K + + +GV + EI L ++H N+V L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
+ LV+E+ + + L + N L+ E + KGL F H +
Sbjct: 69 VLHSDKKLTLVFEFCDQD-LKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL-T 228
++HRD+K N+L+++ K+ +FGLA+ F + + + T Y P+ + G +L +
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 229 MKADVYSFGVLVLEIISGRNSGKAMW 254
D++S G + E+ N+G+ ++
Sbjct: 181 TSIDMWSAGCIFAELA---NAGRPLF 203
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLT-NGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V T G R+AVK LS +S + E+ L +++H N++ L+
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
E + L L+GA NI KL + + I +GL ++H
Sbjct: 90 FTPARS----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ KI D GLA+ D +T ++ TR Y APE +L
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 51 SNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELI 108
S +G G + V +L NG+ AVK + ++ E+ TL + + N++ELI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
TR LV+E ++ S+ L + N + S + +A L FLH
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLH---TK 130
Query: 169 HIVHRDIKASNILLD--QEFNP-KIGDFGLAK--LFPDNITHIT----TRIAGTTGYLAP 219
I HRD+K NIL + ++ +P KI DF L ++ T IT T G+ Y+AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 220 EY--VLGGQLTM---KADVYSFGVLVLEIISG 246
E V Q T + D++S GV++ ++SG
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 42 RSATDDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIM 94
R DF+ +G+G FG V KGT AVK L + V + E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 95 TLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVL--LGATKANIKLNWEKRSDI 151
L+ P + + C Q R+ V EYV L + +G K + +
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------ 126
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR- 209
IA GL FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+
Sbjct: 127 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 180
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
GT Y+APE + D ++FGVL+ E+++G+
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 21/202 (10%)
Query: 54 IGRGGFGTVY--KGTLTNGRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G+G FG V K +T G+ AVK +S + K + E+ L + HPN+++L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 109 GCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
LV E Y D ++ + + + + I + G+ ++H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSGITYMHKN-- 145
Query: 168 PHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG 224
IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I GT Y+APE VL
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAYYIAPE-VLH 201
Query: 225 GQLTMKADVYSFGVLVLEIISG 246
G K DV+S GV++ ++SG
Sbjct: 202 GTYDEKCDVWSTGVILYILLSG 223
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVY--KGTLTNGRRIAVKPLS---AESKQGVREFITEIMTLSNV 99
+D + +G+G FG V K +T G+ AVK +S + K + E+ L +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 100 RHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
HPN+++L LV E Y D ++ + + + + I + G
Sbjct: 107 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSG 161
Query: 159 LAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I GT
Sbjct: 162 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAY 216
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE VL G K DV+S GV++ ++SG
Sbjct: 217 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 42 RSATDDFHLSNKIGRGGFGTVY----KGTLTNGRRIAVKPLSAE---SKQGVREFITEIM 94
R DF+ +G+G FG V KGT AVK L + V + E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 95 TLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVL--LGATKANIKLNWEKRSDI 151
L+ P + + C Q R+ V EYV L + +G K + +
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY------ 447
Query: 152 CVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI-THITTR- 209
IA GL FL + I++RD+K N++LD E + KI DFG+ K +NI +TT+
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 501
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGR 247
GT Y+APE + D ++FGVL+ E+++G+
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 39/297 (13%)
Query: 54 IGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ 113
IG+G FG VY G I + + +++ ++ F E+M RH N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 114 GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHR 173
++ + +L V+ A I L+ K I I KG+ +LH + I+H+
Sbjct: 101 PPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHK 154
Query: 174 DIKASNILLDQEFNPK--IGDFGL---AKLFPDNITHITTRIA-GTTGYLAPEYVLGGQ- 226
D+K+ N+ D N K I DFGL + + RI G +LAPE +
Sbjct: 155 DLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSP 211
Query: 227 --------LTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELV 278
+ +DV++ G + E+ + K Q + ++ WQ+ KP L
Sbjct: 212 DTEEDKLPFSKHSDVFALGTIWYELHAREWPFKT---QPAEAII---WQMGTGMKP-NLS 264
Query: 279 DPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNIRLNEEELTAPGLF 335
+G+ + + FC RP +++ ML K + N L+ PG F
Sbjct: 265 QIGMGKEISD-------ILLFCWAFEQEERPTFTKLMDMLEKLPKRN-RRLSHPGHF 313
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVY--KGTLTNGRRIAVKPLS---AESKQGVREFITEIMTLSNV 99
+D + +G+G FG V K +T G+ AVK +S + K + E+ L +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 100 RHPNLVELIGCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
HPN+++L LV E Y D ++ + + + + I + G
Sbjct: 108 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSG 162
Query: 159 LAFLHEELVPHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTG 215
+ ++H+ IVHRD+K N+LL+ ++ N +I DFGL+ F + + +I GT
Sbjct: 163 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GTAY 217
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
Y+APE VL G K DV+S GV++ ++SG
Sbjct: 218 YIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAES---KQGVREFITEIMTLSNVRH 101
+DF + IGRGGFG VY + G+ A+K L + KQG + E + LS V
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKR-----SDI---CV 153
+ I C + Y + + L +L ++ + + +D+
Sbjct: 248 GD-CPFIVC--------MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 298
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 213
I GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT
Sbjct: 299 EIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 352
Query: 214 TGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 248
GY+APE + G AD +S G ++ +++ G +
Sbjct: 353 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAES---KQGVREFITEIMTLSNVRH 101
+DF + IGRGGFG VY + G+ A+K L + KQG + E + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKR-----SDI---CV 153
+ I C + Y + + L +L ++ + + +D+
Sbjct: 249 GD-CPFIVC--------MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 213
I GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT
Sbjct: 300 EIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 214 TGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 248
GY+APE + G AD +S G ++ +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAES---KQGVREFITEIMTLSNVRH 101
+DF + IGRGGFG VY + G+ A+K L + KQG + E + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKR-----SDI---CV 153
+ I C + Y + + L +L ++ + + +D+
Sbjct: 249 GD-CPFIVC--------MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 213
I GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT
Sbjct: 300 EIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 214 TGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 248
GY+APE + G AD +S G ++ +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSAES---KQGVREFITEIMTLSNVRH 101
+DF + IGRGGFG VY + G+ A+K L + KQG + E + LS V
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKR-----SDI---CV 153
+ I C + Y + + L +L ++ + + +D+
Sbjct: 249 GD-CPFIVC--------MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGT 213
I GL +H V V+RD+K +NILLD+ + +I D GLA F H + GT
Sbjct: 300 EIILGLEHMHNRFV---VYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GT 353
Query: 214 TGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 248
GY+APE + G AD +S G ++ +++ G +
Sbjct: 354 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 15/245 (6%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRH 101
DD ++GRG +G V K + +G+ AVK + A S++ R ++ V
Sbjct: 33 ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDC 92
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P V G + + E + + SLD+ + + I V I K L
Sbjct: 93 PFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEH 151
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +L ++HRD+K SN+L++ K DFG++ D++ AG Y APE
Sbjct: 152 LHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID--AGCKPYXAPER 207
Query: 222 V---LGGQ-LTMKADVYSFGVLVLEIISGR---NSGKAMWGQMNKFLLEWAWQLHQEEKP 274
+ L + ++K+D++S G+ +E+ R +S + Q+ + + E + QL ++
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFS 267
Query: 275 LELVD 279
E VD
Sbjct: 268 AEFVD 272
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 104/222 (46%), Gaps = 30/222 (13%)
Query: 54 IGRGGFGTVYKG-TLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V +G ++A+K LS +S+ + E++ L +++H N++ L+
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 111 CVQGTRRILVYEY-----VENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEE 165
+ Y++ L +++ ++ + EK + + KGL ++H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIM------GMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 166 LVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTGYLAPEYV 222
+VHRD+K N+ ++++ KI DFGLA+ H + G T Y APE +
Sbjct: 164 ---GVVHRDLKPGNLAVNEDCELKILDFGLAR-------HADAEMTGYVVTRWYRAPEVI 213
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
L D++S G ++ E+++G+ GK Q+ + L
Sbjct: 214 LSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 53 KIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
++GRG FG V++ G + AVK + E + + E++ + + P +V L G
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 135
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA-KGLAFLHEELVPHI 170
+G + E +E SL +++ + E R+ +G A +GL +LH I
Sbjct: 136 REGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR---RI 187
Query: 171 VHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---ITTRIAGTTGYLAPEYVLGG 225
+H D+KA N+LL + + + DFG A L PD + I GT ++APE V+G
Sbjct: 188 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 247
Query: 226 QLTMKADVYSFGVLVLEIISG 246
K D++S ++L +++G
Sbjct: 248 PCDAKVDIWSSCCMMLHMLNG 268
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHP 102
D++ + IG G +G V G+++A+K P + + + + E+ L + +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 103 NLVELIGCCVQGTRRILVYE-----YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N++ + R + Y YV + ++ L ++ L E + +
Sbjct: 115 NIIAIKDIL----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 170
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTT 214
GL ++H ++HRD+K SN+L+++ KIGDFG+A+ P + T T
Sbjct: 171 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 215 GYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRN 248
Y APE +L + T D++S G + E+++ R
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 53 KIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
++GRG FG V++ G + AVK + E + + E++ + + P +V L G
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 119
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA-KGLAFLHEELVPHI 170
+G + E +E SL +++ + E R+ +G A +GL +LH I
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR---RI 171
Query: 171 VHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---ITTRIAGTTGYLAPEYVLGG 225
+H D+KA N+LL + + + DFG A L PD + I GT ++APE V+G
Sbjct: 172 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 231
Query: 226 QLTMKADVYSFGVLVLEIISG 246
K D++S ++L +++G
Sbjct: 232 PCDAKVDIWSSCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 20/201 (9%)
Query: 53 KIGRGGFGTVYK-GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
++GRG FG V++ G + AVK + E + + E++ + + P +V L G
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYGAV 133
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA-KGLAFLHEELVPHI 170
+G + E +E SL +++ + E R+ +G A +GL +LH I
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYLGQALEGLEYLHTR---RI 185
Query: 171 VHRDIKASNILLDQEFN-PKIGDFGLA-KLFPDNITH---ITTRIAGTTGYLAPEYVLGG 225
+H D+KA N+LL + + + DFG A L PD + I GT ++APE V+G
Sbjct: 186 LHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGK 245
Query: 226 QLTMKADVYSFGVLVLEIISG 246
K D++S ++L +++G
Sbjct: 246 PCDAKVDIWSSCCMMLHMLNG 266
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 54 IGRGGFGTVY--KGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCC 111
+G G F V+ K LT G+ A+K + EI L ++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLT-GKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY 75
Query: 112 VQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPH 169
T LV + V L DR+L EK + + + + + +LHE
Sbjct: 76 ESTTHYYLVMQLVSGGELFDRILERGVYT------EKDASLVIQQVLSAVKYLHEN---G 126
Query: 170 IVHRDIKASNIL-LDQEFNPKI--GDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQ 226
IVHRD+K N+L L E N KI DFGL+K+ + I + GT GY+APE +
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM---STACGTPGYVAPEVLAQKP 183
Query: 227 LTMKADVYSFGVLVLEIISG 246
+ D +S GV+ ++ G
Sbjct: 184 YSKAVDCWSIGVITYILLCG 203
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 104/231 (45%), Gaps = 21/231 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLT-NGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHP 102
D++ + IG G +G V G+++A+K P + + + + E+ L + +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 103 NLVELIGCCVQGTRRILVYE-----YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N++ + R + Y YV + ++ L ++ L E + +
Sbjct: 114 NIIAIKDIL----RPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLR 169
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIAGTT 214
GL ++H ++HRD+K SN+L+++ KIGDFG+A+ P + T T
Sbjct: 170 GLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 215 GYLAPEYVLG-GQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLL 262
Y APE +L + T D++S G + E+++ R GK Q+ ++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 34 NHFSYTELRSATDDFHLSNK---IGRGGFGTVYKGTLT-NGRRIAVKPLSAESKQGVREF 89
+H T + A + F+ +K +G G FG V+K T G ++A K + + E
Sbjct: 74 DHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV 133
Query: 90 ITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKR 148
EI ++ + H NL++L +LV EYV+ L DR++ + N +
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII------DESYNLTEL 187
Query: 149 SDICV--GIAKGLAFLHEELVPHIVHRDIKASNIL-LDQEFNP-KIGDFGLAKLF-PDNI 203
I I +G+ +H+ +I+H D+K NIL ++++ KI DFGLA+ + P
Sbjct: 188 DTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK 244
Query: 204 THITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNS--GKAMWGQMNKFL 261
+ GT +LAPE V ++ D++S GV+ ++SG + G +N +
Sbjct: 245 LKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNN-I 300
Query: 262 LEWAWQLHQEE 272
L W L EE
Sbjct: 301 LACRWDLEDEE 311
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLS----AESKQGV--REFITEIMT 95
D + + ++G G F V KGT G+ A K + + S++GV E E+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 68
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 69 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 124
Query: 156 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 210
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 125 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 178
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 110/252 (43%), Gaps = 42/252 (16%)
Query: 21 APQGVDGELLRNVNHFSYTELRSAT----------DDFHLSNKIGRGGFGTVY-----KG 65
A G GE L V H ELR+A ++F L +G G +G V+ G
Sbjct: 23 ADGGDGGEQLLTVKH----ELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISG 78
Query: 66 TLTNGRRIAVKPLS-------AESKQGVREFITEIMTLSNVRH-PNLVELIGCCVQGTRR 117
T G+ A+K L A++ + R TE L ++R P LV L T+
Sbjct: 79 HDT-GKLYAMKVLKKATIVQKAKTTEHTR---TERQVLEHIRQSPFLVTLHYAFQTETKL 134
Query: 118 ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLAFLHEELVPHIVHRDIK 176
L+ +Y+ L L + E I VG I L LH+ I++RDIK
Sbjct: 135 HLILDYINGGELFTHLSQRERFT-----EHEVQIYVGEIVLALEHLHK---LGIIYRDIK 186
Query: 177 ASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL--TMKADVY 234
NILLD + + DFGL+K F + T GT Y+AP+ V GG D +
Sbjct: 187 LENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWW 246
Query: 235 SFGVLVLEIISG 246
S GVL+ E+++G
Sbjct: 247 SLGVLMYELLTG 258
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 15/221 (6%)
Query: 34 NHFSYTELRSAT----DDFHLSNKIGRGGFGTVYKGTLTN-GRRIAVKPLSA--ESKQGV 86
N F E+ +T + IG G G V T G +AVK LS +++
Sbjct: 8 NQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHA 67
Query: 87 REFITEIMTLSNVRHPNLVELIGCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNW 145
+ E++ L V H N++ L+ Q T Y+ +D L +++L+
Sbjct: 68 KRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI--HMELDH 125
Query: 146 EKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITH 205
E+ S + + G+ LH I+HRD+K SNI++ + KI DFGLA+ N
Sbjct: 126 ERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF-- 180
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+ T T Y APE +LG D++S G ++ E++ G
Sbjct: 181 MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLTNGR-RIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V R ++AVK LS +S R E+ L +++H N++ L+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
T E L L+GA NI L+ E + + +GL ++H
Sbjct: 88 FTPATS----IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 141
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ +I DFGLA+ + +T ++ TR Y APE +L
Sbjct: 142 -AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNW 195
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E++ G+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 21/203 (10%)
Query: 54 IGRGGFGTVYKGTLTNGR-RIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
+G G +G+V R ++AVK LS +S R E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 111 CVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHEEL 166
T E L L+GA NI L+ E + + +GL ++H
Sbjct: 96 FTPATS----IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS-- 149
Query: 167 VPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVLGG 225
I+HRD+K SN+ ++++ +I DFGLA+ + +T ++ TR Y APE +L
Sbjct: 150 -AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIMLNW 203
Query: 226 -QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E++ G+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLS----AESKQGV--REFITEIMT 95
D + + ++G G F V KGT G+ A K + + S++GV E E+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 117
Query: 156 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 210
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 118 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 171
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 172 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
+G G +G+V Y L +++AVK LS +S R E+ L +++H N++ L+
Sbjct: 36 VGSGAYGSVCSAYDARLR--QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 109 GCCVQGTRRILVYEYVENNSLDRVLLGATKANI----KLNWEKRSDICVGIAKGLAFLHE 164
T E L L+GA NI L+ E + + +GL ++H
Sbjct: 94 DVFTPATS----IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 165 ELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNIT-HITTRIAGTTGYLAPEYVL 223
I+HRD+K SN+ ++++ +I DFGLA+ + +T ++ TR Y APE +L
Sbjct: 150 ---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 224 GG-QLTMKADVYSFGVLVLEIISGR 247
D++S G ++ E++ G+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
DF IG GGFG V+K +G+ +K + +++ RE + L+ + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 106 ELIGC----------CVQGTRR------ILVYEYVENNSLDRVLLGATKANIKLNWEKRS 149
GC + + R + E+ + +L++ + + KL+
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLAL 125
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR 209
++ I KG+ ++H + +++RD+K SNI L KIGDFGL ++ R
Sbjct: 126 ELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XR 180
Query: 210 IAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
GT Y++PE + + D+Y+ G+++ E++
Sbjct: 181 SKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 99/209 (47%), Gaps = 19/209 (9%)
Query: 53 KIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVR-EFITEIMTLSNVRHPNLVELIGCC 111
K+GRG +G VYK +G+ L G+ EI L ++HPN++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 112 VQGTRR--ILVYEYVENNSLDRVLLG-ATKAN---IKLNWEKRSDICVGIAKGLAFLHEE 165
+ R L+++Y E++ + A+KAN ++L + I G+ +LH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 166 LVPHIVHRDIKASNILLDQEFNP-----KIGDFGLAKLFPDNITHIT--TRIAGTTGYLA 218
V +HRD+K +NIL+ E P KI D G A+LF + + + T Y A
Sbjct: 148 WV---LHRDLKPANILVMGE-GPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 219 PEYVLGGQLTMKA-DVYSFGVLVLEIISG 246
PE +LG + KA D+++ G + E+++
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELIGC 110
IG G G V T G +AVK LS +++ + E++ L V H N++ L+
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV 89
Query: 111 CV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVPH 169
Q T Y+ +D L +++L+ E+ S + + G+ LH
Sbjct: 90 FTPQKTLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHSA---G 144
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
I+HRD+K SNI++ + KI DFGLA+ N + T T Y APE +LG
Sbjct: 145 IIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRAPEVILGMGYKE 202
Query: 230 KADVYSFGVLVLEIISG 246
D++S G ++ E++ G
Sbjct: 203 NVDIWSVGCIMGELVKG 219
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 111/241 (46%), Gaps = 31/241 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL----- 107
+G GG G V+ + +R+A+K + Q V+ + EI + + H N+V++
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 108 ---------IGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
+G + +V EY+E + L L E + +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETD------LANVLEQGPLLEEHARLFMYQLLRG 132
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQE-FNPKIGDFGLAKLFPDNITHITTRIAG--TTG 215
L ++H +++HRD+K +N+ ++ E KIGDFGLA++ + +H G T
Sbjct: 133 LKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKW 189
Query: 216 YLAPEYVLGGQLTMKA-DVYSFGVLVLEIISGRN--SGKAMWGQMNKFLLEWAWQLHQEE 272
Y +P +L KA D+++ G + E+++G+ +G QM + +LE +H+E+
Sbjct: 190 YRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQM-QLILESIPVVHEED 248
Query: 273 K 273
+
Sbjct: 249 R 249
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 124
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 179
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 103/216 (47%), Gaps = 28/216 (12%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLS----AESKQGV--REFITEIMT 95
D + + ++G G F V KGT G+ A K + S++GV E E+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L +RHPN++ L T +L+ E V L L A K + L ++ + I
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES--LTEDEATQFLKQI 138
Query: 156 AKGLAFLHEELVPHIVHRDIKASNI-LLDQEF-NPKIG--DFGLA-KLFPDNITHITTRI 210
G+ +LH + I H D+K NI LLD+ NP+I DFG+A K+ N I
Sbjct: 139 LDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNI 192
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 193 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVY--KGTLTNGRRIA--VKPLSAESKQGVREFITEIMTLSNVR 100
+D + K+G G +G V K LT R +K S + + E+ L +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
HPN+++L LV E L D ++L + + + I + G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-----AAVIMKQVLSGT 134
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 216
+LH+ +IVHRD+K N+LL+ + KI DFGL+ F + GT Y
Sbjct: 135 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYY 189
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+APE VL + K DV+S GV++ ++ G
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 124
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 125 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 179
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 180 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S GV++ E+I G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 45 TDDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTL 96
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQIL 124
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAG 212
G+ +LH I H D+K NI+L PK I DFGLA + + I G
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFG 179
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
T ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVVAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S GV++ E+I G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 21/214 (9%)
Query: 45 TDDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTL 96
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSIL 68
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 69 KEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQIL 124
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAG 212
G+ +LH I H D+K NI+L PK I DFGLA + + I G
Sbjct: 125 NGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFG 179
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
T ++APE V L ++AD++S GV+ ++SG
Sbjct: 180 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 19/210 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVY--KGTLTNGRRIA--VKPLSAESKQGVREFITEIMTLSNVR 100
+D + K+G G +G V K LT R +K S + + E+ L +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
HPN+++L LV E L D ++L + + + I + G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD-----AAVIMKQVLSGT 117
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 216
+LH+ +IVHRD+K N+LL+ + KI DFGL+ F + GT Y
Sbjct: 118 TYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYY 172
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+APE VL + K DV+S GV++ ++ G
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRH 101
+D + L IG G FG + + N +AVK + E + + E + EI+ ++RH
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQAN-ELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN+V + T +V EY L + A + + ++ + G+++
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSY 130
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTRIA-GTTGYLA 218
H + HRD+K N LLD P KI DFG +K ++ H + A GT Y+A
Sbjct: 131 AH---AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKA---SVLHSQPKSAVGTPAYIA 184
Query: 219 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 246
PE +L + K ADV+S GV + ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 95/215 (44%), Gaps = 20/215 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT--------LTNGRRIAVKPLSAESKQGVREFITEIMTL 96
+D + +G+G F ++KG + + +K L + F +
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
S + H +LV G CV G ILV E+V+ SLD L K I + W + ++ +A
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQLA 123
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR----IAG 212
+ FL E ++H ++ A NILL +E + K G+ KL I+ IT +
Sbjct: 124 AAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQE 179
Query: 213 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 246
++ PE + + L + D +SFG + EI SG
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 97/226 (42%), Gaps = 37/226 (16%)
Query: 47 DFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
DF IG GGFG V+K +G+ ++ + +++ RE + L+ + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 106 ELIGCC-------VQGTRRILVYEYVENNSLDRVLLGATKANIKLNW----------EKR 148
GC + +Y NS + I++ + EKR
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 149 S----------DICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL 198
++ I KG+ ++H + ++HRD+K SNI L KIGDFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
++ TR GT Y++PE + + D+Y+ G+++ E++
Sbjct: 186 LKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFH-LSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 54 IGRGGFGTVY--KGTLTNGRRIAVKPLS---AESKQGVREFITEIMTLSNVRHPNLVELI 108
+G+G FG V K +T G+ AVK +S + K + E+ L + HPN+ +L
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 109 GCCVQGTRRILVYE-YVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
LV E Y D ++ + + + + I + G+ + H+
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII-----SRKRFSEVDAARIIRQVLSGITYXHKN-- 145
Query: 168 PHIVHRDIKASNILLD---QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLG 224
IVHRD+K N+LL+ ++ N +I DFGL+ F + GT Y+APE VL
Sbjct: 146 -KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VLH 201
Query: 225 GQLTMKADVYSFGVLVLEIISG 246
G K DV+S GV++ ++SG
Sbjct: 202 GTYDEKCDVWSTGVILYILLSG 223
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 100/213 (46%), Gaps = 21/213 (9%)
Query: 46 DDFHLS-NKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV-REFIT-EIMTLS 97
DD++ + ++G G F V K L + K + S++GV RE I E+ L
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 98 NVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
++HPN++ L T IL+ E V L L A K + L E+ ++ I
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKES--LTEEEATEFLKQILN 125
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPK----IGDFGLAKLFPDNITHITTRIAGT 213
G+ +LH I H D+K NI+L PK I DFGLA + + I GT
Sbjct: 126 GVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGT 180
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 181 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 13/210 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNV 99
D + L IG+G F V + G++ AVK ++ + E +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+HP++VEL+ +V+E+++ L ++ A + S I + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 216
+ H+ +I+HRD+K N+LL + N K+GDFG+A ++ R+ GT +
Sbjct: 144 RYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHF 199
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+APE V DV+ GV++ ++SG
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV--REFITEIMTLSN 98
D + + ++G G F V K L + K S S++GV E E+ L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V H N++ L T +L+ E V L L A K + L+ E+ + I G
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQILDG 127
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH I H D+K NI+L + P K+ DFGLA D + I GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIG 109
KIG+G FG V+K G+++A+K + E+ K+G + EI L ++H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 110 CC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAK 157
C +G+ LV+++ E++ L VL+ T + IK + +
Sbjct: 85 ICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLN 136
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TT 214
GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F R T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 215 GYLAPEYVLG 224
Y PE +LG
Sbjct: 194 WYRPPELLLG 203
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV--REFITEIMTLSN 98
D + + ++G G F V K L + K S S++GV E E+ L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V H N++ L T +L+ E V L L A K + L+ E+ + I G
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQILDG 127
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH I H D+K NI+L + P K+ DFGLA D + I GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIG 109
KIG+G FG V+K G+++A+K + E+ K+G + EI L ++H N+V LI
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 110 CC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAK 157
C +G+ LV+++ E++ L VL+ T + IK + +
Sbjct: 84 ICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLN 135
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TT 214
GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F R T
Sbjct: 136 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 215 GYLAPEYVLG 224
Y PE +LG
Sbjct: 193 WYRPPELLLG 202
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLXGIKHLHSA-- 138
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 139 -GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F IG G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV--REFITEIMTLSN 98
D + + ++G G F V K L + K S S++GV E E+ L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V H N++ L T +L+ E V L L A K + L+ E+ + I G
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQILDG 127
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH I H D+K NI+L + P K+ DFGLA D + I GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV--REFITEIM 94
+ D + + ++G G F V K L + K S S++GV E E+
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 95 TLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG 154
L V H N++ L T +L+ E V L L A K + L+ E+ +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQ 123
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRI 210
I G+ +LH I H D+K NI+L + P K+ DFGLA D + I
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNI 178
Query: 211 AGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GT ++APE V L ++AD++S GV+ ++SG
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 95/212 (44%), Gaps = 20/212 (9%)
Query: 46 DDFHLSNKIGRGGFGTVYK-----GTLTNGRRIAVKPLSAESKQGV--REFITEIMTLSN 98
D + + ++G G F V K L + K S S++GV E E+ L
Sbjct: 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQ 71
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V H N++ L T +L+ E V L L A K + L+ E+ + I G
Sbjct: 72 VLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES--LSEEEATSFIKQILDG 127
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNP----KIGDFGLAKLFPDNITHITTRIAGTT 214
+ +LH I H D+K NI+L + P K+ DFGLA D + I GT
Sbjct: 128 VNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTP 182
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE V L ++AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 94/190 (49%), Gaps = 29/190 (15%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIG 109
KIG+G FG V+K G+++A+K + E+ K+G + EI L ++H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 110 CC---------VQGTRRILVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAK 157
C +G+ LV+++ E++ L VL+ T + IK + +
Sbjct: 85 ICRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLN 136
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TT 214
GL ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F R T
Sbjct: 137 GLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 215 GYLAPEYVLG 224
Y PE +LG
Sbjct: 194 WYRPPELLLG 203
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 91/189 (48%), Gaps = 27/189 (14%)
Query: 53 KIGRGGFGTVYKGT-LTNGRRIAVKPLSAES-KQGVR-EFITEIMTLSNVRHPNLVELIG 109
KIG+G FG V+K G+++A+K + E+ K+G + EI L ++H N+V LI
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 110 CCVQGTRRI--------LVYEYVENNS---LDRVLLGATKANIKLNWEKRSDICVGIAKG 158
C LV+++ E++ L VL+ T + IK + + G
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK-------RVMQMLLNG 137
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAG---TTG 215
L ++H I+HRD+KA+N+L+ ++ K+ DFGLA+ F R T
Sbjct: 138 LYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLW 194
Query: 216 YLAPEYVLG 224
Y PE +LG
Sbjct: 195 YRPPELLLG 203
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 22/204 (10%)
Query: 54 IGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQ 113
IG G FG V++ L +A+K + + + RE +IM + V+HPN+V+L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNREL--QIMRI--VKHPNVVDLKAFFYS 103
Query: 114 -GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC----VGIAKGLAFLHEELVP 168
G ++ V+ + + + A++ KL + + + LA++H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI--- 160
Query: 169 HIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLG 224
I HRDIK N+LLD K+ DFG AK+ N++ I +R Y APE + G
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPELIFG 215
Query: 225 G-QLTMKADVYSFGVLVLEIISGR 247
T D++S G ++ E++ G+
Sbjct: 216 ATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLXQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 88
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 89 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 144
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 145 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 237
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 146
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 147 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 48 FHLSNKIGRGGFG-TVYKGTLTNGRRIAVKPLSAESKQGVREFI-TEIMTLSNVRHPNLV 105
F +G G F V G+ AVK + ++ +G I EI L ++H N+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 106 ELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
L LV + V L DR++ + S + + + +LH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTE-----KDASTLIRQVLDAVYYLHR 138
Query: 165 ELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
IVHRD+K N+L D+E I DFGL+K+ + + + GT GY+APE
Sbjct: 139 ---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEV 193
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+ + D +S GV+ ++ G
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 82
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 138
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 139 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 139
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 140 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 238
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 83
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 139
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 140 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRH 101
+D + L IG G FG + + +N +AVK + E + + E + EI+ ++RH
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRH 73
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN+V + T +V EY L + A + + ++ + G+++
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSY 129
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTTGYLA 218
H + HRD+K N LLD P KI DFG +K ++ H + GT Y+A
Sbjct: 130 CH---AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIA 183
Query: 219 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 246
PE +L + K ADV+S GV + ++ G
Sbjct: 184 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 90
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 91 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 146
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 147 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 239
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 183
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 184 -GIIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISG 246
D++S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISG 246
D++S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL 127
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q T Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 183
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 184 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 241 KENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F IG G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY+ + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRH 101
+D + IG G FG + + LT +AVK + E + E + EI+ ++RH
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTK-ELVAVKYI--ERGAAIDENVQREIINHRSLRH 75
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN+V + T ++ EY L + A + + ++ + G+++
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSY 131
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTTGYLA 218
H I HRD+K N LLD P KI DFG +K ++ H + GT Y+A
Sbjct: 132 CHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIA 185
Query: 219 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 246
PE +L + K ADV+S GV + ++ G
Sbjct: 186 PEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 201 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 258 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F IG G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY+ + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 33 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 146
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 147 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 228 TMKADVYSFGVLVLEIISG 246
D++S G ++ E+I G
Sbjct: 204 KENVDIWSVGCIMGEMIKG 222
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 196 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 253 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 203 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 260 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 10/100 (10%)
Query: 151 ICVG--IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITH 205
IC +AKG+ FL +HRD+ A NILL ++ KI DFGLA+ PD +
Sbjct: 194 ICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 206 ITTRIAGTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
R+ ++APE + T+++DV+SFGVL+ EI S
Sbjct: 251 GDARLP--LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRH 101
+D++ + ++G+G F V + T G A K ++ + S + ++ E ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLA 160
PN+V L + + LV++ V L ++ + E + C+ I + +A
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 142
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGYL 217
+ H IVHR++K N+LL + K+ DFGLA N + AGT GYL
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 197
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
+PE + + D+++ GV++ ++ G
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRH 101
+D++ + ++G+G F V + T G A K ++ + S + ++ E ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLA 160
PN+V L + + LV++ V L ++ + E + C+ I + +A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFN---PKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
+ H IVHR++K N+LL + K+ DFGLA N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
+PE + + D+++ GV++ ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRH 101
+D++ + ++G+G F V + T G A K ++ + S + ++ E ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLA 160
PN+V L + + LV++ V L ++ + E + C+ I + +A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 119
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFN---PKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
+ H IVHR++K N+LL + K+ DFGLA N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
+PE + + D+++ GV++ ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 109 GC-----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ + + + + + +L +V+ ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCGIKHLH 143
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVL 223
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +L
Sbjct: 144 SA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVIL 198
Query: 224 GGQLTMKADVYSFGVLVLEIISG 246
G D++S G ++ E+I G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 17/209 (8%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRH 101
+D++ + ++G+G F V + T G A K ++ + S + ++ E ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLA 160
PN+V L + + LV++ V L ++ + E + C+ I + +A
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 118
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFN---PKIGDFGLAKLFPDNITHITTRIAGTTGYL 217
+ H IVHR++K N+LL + K+ DFGLA N + AGT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
+PE + + D+++ GV++ ++ G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIG 109
+G+GGF Y+ T + + + V P S K +E + TEI ++ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E++ V+L + L KR +G+
Sbjct: 110 -------------FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+LH ++HRD+K N+ L+ + + KIGDFGLA + T + GT Y+APE
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPE 212
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+ + + D++S G ++ ++ G+
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 20/215 (9%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT--------LTNGRRIAVKPLSAESKQGVREFITEIMTL 96
+D + +G+G F ++KG + + +K L + F +
Sbjct: 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMM 66
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
S + H +LV G C G ILV E+V+ SLD L K I + W + ++ +A
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQLA 123
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR----IAG 212
+ FL E ++H ++ A NILL +E + K G+ KL I+ IT +
Sbjct: 124 WAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQE 179
Query: 213 TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISG 246
++ PE + + L + D +SFG + EI SG
Sbjct: 180 RIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF---PDNITHITTRIA 211
+A+G+ FL +HRD+ A NILL + KI DFGLA+ PD + TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 212 GTTGYLAPEYVLGGQLTMKADVYSFGVLVLEIIS 245
++APE + + K+DV+S+GVL+ EI S
Sbjct: 265 --LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Query: 44 ATDDFHLSNKIGRGGFGTVYKGTL------TNGRRIAVKPLS-AESKQGVREFITEIMTL 96
A + L +GRG FG V + + R +AVK L + + +TE+ L
Sbjct: 25 ARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKIL 84
Query: 97 SNV-RHPNLVELIGCCV-QGTRRILVYEYVENNSLDRVL 133
+++ H N+V L+G C QG +++ EY + +L L
Sbjct: 85 THIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + ++E + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFGLAK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 15/199 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISG 246
D++S G ++ E+I G
Sbjct: 203 KENVDIWSVGCIMGEMIKG 221
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRHP 102
+D + L IG G FG + + +N +AVK + K EI+ ++RHP
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYIERGEKIAAN-VKREIINHRSLRHP 75
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
N+V + T +V EY L + A + + ++ + G+++
Sbjct: 76 NIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSYC 131
Query: 163 HEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTTGYLAP 219
H + HRD+K N LLD P KI DFG +K ++ H + GT Y+AP
Sbjct: 132 HAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAP 185
Query: 220 EYVLGGQLTMK-ADVYSFGVLVLEIISG 246
E +L + K ADV+S GV + ++ G
Sbjct: 186 EVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%), Gaps = 26/219 (11%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTL-TNGRRIAVKPL--SAESKQGVREFITEIMTL 96
E+R+ D +G G +G V G ++A+K L +S+ + E+ L
Sbjct: 22 EVRAVYRDLQ---PVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLL 78
Query: 97 SNVRHPNLVELIGCCVQG------TRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSD 150
++RH N++ L+ T LV ++ + LG + KL ++
Sbjct: 79 KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTD------LGKLMKHEKLGEDRIQF 132
Query: 151 ICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRI 210
+ + KGL ++H I+HRD+K N+ ++++ KI DFGLA+ +
Sbjct: 133 LVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVV-- 187
Query: 211 AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEIISGRN 248
T Y APE +L + T D++S G ++ E+I+G+
Sbjct: 188 --TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIM-TLSNV 99
R D F + G+G FGTV G + G +A+K + + + RE +IM L+ +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL--QIMQDLAVL 76
Query: 100 RHPNLVELIGCCV---QGTRRIL----VYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 152
HPN+V+L + RR + V EYV + +L R + +
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFL 135
Query: 153 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQ-EFNPKIGDFGLA-KLFPD--NITHITT 208
+ + + LH V ++ HRDIK N+L+++ + K+ DFG A KL P N+ +I +
Sbjct: 136 FQLIRSIGCLHLPSV-NVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICS 194
Query: 209 RIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFL 261
R Y APE + G Q T D++S G + E++ G G GQ+++ +
Sbjct: 195 RY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 34 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 91
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 92 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 147
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T Y APE +LG
Sbjct: 148 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 228 TMKADVYSFGVLVLEIISG 246
D++S G ++ E+I G
Sbjct: 205 KENVDIWSVGCIMGEMIKG 223
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 54 IGRGGFGTVYKGT-LTNGRRIAVK-------PLSAESKQGVREFIT-EIMTLSNVR-HPN 103
IGRG V + G AVK LS E + VRE E L V HP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ LI + LV++ + L L + L+ ++ I + + ++FLH
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLH 217
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAPEYV 222
+IVHRD+K NILLD ++ DFG + L P + GT GYLAPE +
Sbjct: 218 AN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPE-I 270
Query: 223 LGGQLT-------MKADVYSFGVLVLEIISG 246
L + + D+++ GV++ +++G
Sbjct: 271 LKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTNGRRI--AVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L N IGRG +G V K + G RI A K + + V F EI + ++ HPN++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 106 ELIGCCVQGTRRILVYEYVENNSL------DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
L T LV E L RV + A I + + +
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD----------VLSAV 119
Query: 160 AFLHEELVPHIVHRDIKASNILL--DQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGY 216
A+ H+ ++ HRD+K N L D +P K+ DFGLA F + T++ GT Y
Sbjct: 120 AYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYY 174
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++P+ VL G + D +S GV++ ++ G
Sbjct: 175 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 28/210 (13%)
Query: 48 FHLSNKIGRGGFGTVYKGTLTNGRRI--AVKPLSAESKQGVREFITEIMTLSNVRHPNLV 105
+ L N IGRG +G V K + G RI A K + + V F EI + ++ HPN++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 106 ELIGCCVQGTRRILVYEYVENNSL------DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
L T LV E L RV + A I + + +
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKD----------VLSAV 136
Query: 160 AFLHEELVPHIVHRDIKASNILL--DQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGY 216
A+ H+ ++ HRD+K N L D +P K+ DFGLA F + T++ GT Y
Sbjct: 137 AYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYY 191
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++P+ VL G + D +S GV++ ++ G
Sbjct: 192 VSPQ-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIG 109
+G+GGF Y+ T + + + V P S K +E + TEI ++ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E++ V+L + L KR +G+
Sbjct: 110 -------------FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 219
+LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT Y+AP
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKXLCGTPNYIAP 211
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + + + D++S G ++ ++ G+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 78 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 135
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 45 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 102
Query: 136 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 195
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 103 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 157
Query: 196 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 245
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 158 SCQLDPGEKLR---EVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 211
Query: 246 G 246
G
Sbjct: 212 G 212
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIG 109
+G+GGF Y+ T + + + V P S K +E + TEI ++ +P++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E++ V+L + L KR +G+
Sbjct: 94 -------------FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 140
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 219
+LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT Y+AP
Sbjct: 141 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAP 195
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + + + D++S G ++ ++ G+
Sbjct: 196 EVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 78 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 135
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 136 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 195
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 196 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 245
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 171 SCQLDPGEKLR---EVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 246 G 246
G
Sbjct: 225 G 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 32/208 (15%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFI-TEIMTLSNVRHPNLVELIG 109
+G+GGF Y+ T + + + V P S K +E + TEI ++ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E++ V+L + L KR +G+
Sbjct: 110 -------------FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQ 156
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAGTTGYLAP 219
+LH ++HRD+K N+ L+ + + KIGDFGLA K+ D + GT Y+AP
Sbjct: 157 YLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG--ERKKDLCGTPNYIAP 211
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGR 247
E + + + D++S G ++ ++ G+
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 45 TDDFHLSNKIGRGGFGTV---YKGTLTN---GRRIAVKPLSAESKQGVREFITEIMTLSN 98
TDD+ L ++G+G F V K T T + I K LSA Q + E
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRL 86
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAK 157
++HPN+V L + LV++ V L ++ + E + C+ I +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIHQILE 141
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFN---PKIGDFGLAKLFPDNITHITTRIAGTT 214
+ +H+ IVHRD+K N+LL + K+ DFGLA + AGT
Sbjct: 142 SVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTP 197
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GYL+PE + D+++ GV++ ++ G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 86/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T +AGT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + ++E + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ ++ DFGLAK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 142
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 143 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEI 195
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 25/181 (13%)
Query: 78 LSAESKQGVREF-ITEIMTLSNVR-HPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLG 135
SAE Q +RE + E+ L V HPN+++L T LV++ ++ L L
Sbjct: 58 FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 136 ATKANIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGL 195
+ L+ ++ I + + + LH+ +IVHRD+K NILLD + N K+ DFG
Sbjct: 116 --TEKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGF 170
Query: 196 A-KLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM---------KADVYSFGVLVLEIIS 245
+ +L P + GT YLAPE + + +M + D++S GV++ +++
Sbjct: 171 SCQLDPGEKLR---SVCGTPSYLAPEII---ECSMNDNHPGYGKEVDMWSTGVIMYTLLA 224
Query: 246 G 246
G
Sbjct: 225 G 225
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 26 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 83
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 84 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 139
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 140 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 197 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 99/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 37 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 94
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 95 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 150
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T T Y APE +LG
Sbjct: 151 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 208 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 105/270 (38%), Gaps = 78/270 (28%)
Query: 47 DFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVRE-FITEIMTLSNVRHPNL 104
DF +GRGGFG V++ + A+K + +++ RE + E+ L+ + HP +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 105 VELIGCCVQGTRRILVYE----YVENNSLDRVLLGAT----------------------- 137
V ++ E ++++ S D L +
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 138 ------------------KANIKLNW--------EKRSDIC----VGIAKGLAFLHEELV 167
K N+K +W ++ +C + IA+ + FLH +
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLK-DWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK-- 183
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKL-------------FPDNITHITTRIAGTT 214
++HRD+K SNI + K+GDFGL P TH GT
Sbjct: 184 -GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTK 240
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEII 244
Y++PE + G + K D++S G+++ E++
Sbjct: 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKET---GNHFAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 98 VNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 154 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 206
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 41 LRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAES--KQGVREFITE---IM 94
L+ +D+ + IGRG FG V +++ A+K LS K+ F E IM
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 95 TLSNVRHPNLVELIGCCVQGTRRI-LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
+N P +V+L C Q + + +V EY+ L ++ + ++ W K V
Sbjct: 130 AFAN--SPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEV 183
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAG 212
+A L +H ++HRD+K N+LLD+ + K+ DFG K+ + H T + G
Sbjct: 184 VLA--LDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-G 237
Query: 213 TTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 246
T Y++PE + G + D +S GV + E++ G
Sbjct: 238 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 146
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 199
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRH 101
+D + L IG G FG + + +N +AVK + E + + E + EI+ ++RH
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN+V + T +V EY L + A + + ++ + G+++
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSY 130
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTTGYLA 218
H + HRD+K N LLD P KI FG +K ++ H + GT Y+A
Sbjct: 131 CH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIA 184
Query: 219 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 246
PE +L + K ADV+S GV + ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 20/209 (9%)
Query: 45 TDDFHLSNKIGRGGFGT--VYKGTLTNGRRIAVKPLSAESKQGVREFIT-EIMTLSNVRH 101
+D + L IG G FG + + +N +AVK + E + + E + EI+ ++RH
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSN-ELVAVKYI--ERGEKIDENVKREIINHRSLRH 74
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
PN+V + T +V EY L + A + + ++ + G+++
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSY 130
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAKLFPDNITHITTR-IAGTTGYLA 218
H + HRD+K N LLD P KI FG +K ++ H + GT Y+A
Sbjct: 131 CH---AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIA 184
Query: 219 PEYVLGGQLTMK-ADVYSFGVLVLEIISG 246
PE +L + K ADV+S GV + ++ G
Sbjct: 185 PEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 87/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 118
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + + I
Sbjct: 119 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 174
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 175 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 227
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 177
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEI 230
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK------GTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
S TD++ L ++G+G F V + G + I K LSA Q + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARIC 57
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++HPN+V L + LV++ V L ++ + +D I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQ 110
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGT 213
+ L ++ + IVHRD+K N+LL + K+ DFGLA + AGT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGT 169
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GYL+PE + D+++ GV++ ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 90
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EYV + + + I
Sbjct: 91 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----FSHLRRIGRFXEPHARFYAAQIVLT 146
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLA
Sbjct: 147 FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLA 199
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 200 PEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 91/213 (42%), Gaps = 20/213 (9%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK------GTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
S TD++ L ++G+G F V + G + I K LSA Q + E
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER---EARIC 57
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIA 156
++HPN+V L + LV++ V L ++ + +D I
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR-------EYYSEADASHCIQ 110
Query: 157 KGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGT 213
+ L ++ + IVHRD+K N+LL + K+ DFGLA + AGT
Sbjct: 111 QILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGT 169
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GYL+PE + D+++ GV++ ++ G
Sbjct: 170 PGYLSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 175
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 176 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 228
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 289 TEFKFPQIKAHPWTKVFR 306
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 96/232 (41%), Gaps = 31/232 (13%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR-IAVKPLSA--ESKQGVREFITEIMTLSNVRHP 102
D++ + + IGRG +G VY N + +A+K ++ E + + EI L+ ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
++ L + Y+ D L K I L + I + G F+
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-PDNITHITTRIAG--------- 212
HE I+HRD+K +N LL+Q+ + KI DFGLA+ D HI +
Sbjct: 148 HES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGP 204
Query: 213 --------------TTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRNS 249
T Y APE +L + T D++S G + E+++ S
Sbjct: 205 HNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKS 256
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 111
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 169
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 170 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 222
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 223 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 282
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 283 TEFKFPQIKAHPWTKVFR 300
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ +VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 88
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 146
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 147 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 199
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 200 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 259
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 260 TEFKFPQIKAHPWTKVFR 277
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 119
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 177
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 178 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 230
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 231 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 290
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 291 TEFKFPQIKAHPWTKVFR 308
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQ--GVREFITEIMTLSNVRH 101
+ DF L + +G G +G V T G +A+K + K +R + EI L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 102 PNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N++ + + + + + + L RV+ ++ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLR 123
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT---------T 208
+ LH +++HRD+K SN+L++ + K+ DFGLA++ ++ + T
Sbjct: 124 AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 209 RIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 247
T Y APE +L + + DV+S G ++ E+ R
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTV----YKGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSN 98
D F +G G FG V +K T G A+K L + +++ + E L
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKET---GNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKG 158
V P LV+L + +V EY + + + + I
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLA 218
+LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLA
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLA 207
Query: 219 PEYVLGGQLTMKADVYSFGVLVLEIISG 246
PE +L D ++ GVL+ E+ +G
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 96
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 154
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 155 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 207
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 208 FGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 26/220 (11%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQ--GVREFITEIMTLSNVRH 101
+ DF L + +G G +G V T G +A+K + K +R + EI L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 102 PNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N++ + + + + + + L RV+ ++ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLR 123
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT---------T 208
+ LH +++HRD+K SN+L++ + K+ DFGLA++ ++ + T
Sbjct: 124 AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 209 RIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 247
T Y APE +L + + DV+S G ++ E+ R
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 121
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 179
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 180 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 232
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 233 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 292
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 293 TEFKFPQIKAHPWTKVFR 310
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 162
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 220
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 221 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 273
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 274 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 333
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 334 TEFKFPQIKAHPWTKVFR 351
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 85 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+LH ++HRD+K N+ L+++ KIGDFGLA + T + GT Y+APE
Sbjct: 132 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+ + + DV+S G ++ ++ G+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 45 TDDFHLSNKIGRGGFGT----VYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
TD + + IG G + ++K T AVK + + E EI+ L +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NMEFAVKIIDKSKRDPTEEI--EIL-LRYGQ 74
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
HPN++ L G +V E ++ L D++L + + S + I K +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF-----FSEREASAVLFTITKTV 129
Query: 160 AFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAGTT 214
+LH + +VHRD+K SNIL +D+ NP +I DFG AK L +N +T T
Sbjct: 130 EYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTA 184
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE + D++S GVL+ +++G
Sbjct: 185 NFVAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 97/230 (42%), Gaps = 38/230 (16%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRR-IAVKPLSA--ESKQGVREFITEIMTLSNVRHP 102
D++ + + IGRG +G VY N + +A+K ++ E + + EI L+ ++
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 103 NLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFL 162
++ L + Y+ D L K I L E I + G F+
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 163 HEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLF-------------------PDN- 202
HE I+HRD+K +N LL+Q+ + K+ DFGLA+ P N
Sbjct: 146 HES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNK 202
Query: 203 ------ITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIIS 245
+H+ TR Y APE +L + T D++S G + E+++
Sbjct: 203 NLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 85 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 131
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+LH ++HRD+K N+ L+++ KIGDFGLA + T + GT Y+APE
Sbjct: 132 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+ + + DV+S G ++ ++ G+
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 89 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 135
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+LH ++HRD+K N+ L+++ KIGDFGLA + T + GT Y+APE
Sbjct: 136 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+ + + DV+S G ++ ++ G+
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 151
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 152 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 204
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLTM 229
+++RD+K N+L+DQ+ K+ DFG AK + T + GT YLAPE +L
Sbjct: 163 LIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNK 218
Query: 230 KADVYSFGVLVLEIISG 246
D ++ GVL+ E+ +G
Sbjct: 219 AVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EY + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 177
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 178 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 230
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAES--KQGVREFITE---I 93
+LR +D+ + IGRG FG V + R++ A+K LS K+ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 94 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
M +N P +V+L +V EY+ L ++ + ++ W + V
Sbjct: 128 MAFAN--SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEV 182
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAG 212
+A L +H +HRD+K N+LLD+ + K+ DFG K+ + + T + G
Sbjct: 183 VLA--LDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 213 TTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 246
T Y++PE + G + D +S GV + E++ G
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + QG E+ + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 255 TEFAFPQIKAHPWTKVFR 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P L +L + +V EY + + + + I +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 83 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 129
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IAGTTGYL 217
+LH ++HRD+K N+ L+++ KIGDFGLA + + R + GT Y+
Sbjct: 130 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLCGTPNYI 182
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + + + DV+S G ++ ++ G+
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P L +L + +V EY + + + + I +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAES--KQGVREFITE---I 93
+LR +D+ + IGRG FG V + R++ A+K LS K+ F E I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 94 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
M +N P +V+L +V EY+ L ++ + ++ W + V
Sbjct: 123 MAFAN--SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEV 177
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAG 212
+A L +H +HRD+K N+LLD+ + K+ DFG K+ + + T + G
Sbjct: 178 VLA--LDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 231
Query: 213 TTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 246
T Y++PE + G + D +S GV + E++ G
Sbjct: 232 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 22/218 (10%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAES--KQGVREFITE---I 93
+LR +D+ + IGRG FG V + R++ A+K LS K+ F E I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 94 MTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
M +N P +V+L +V EY+ L ++ + ++ W + V
Sbjct: 128 MAFAN--SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEV 182
Query: 154 GIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLA-KLFPDNITHITTRIAG 212
+A L +H +HRD+K N+LLD+ + K+ DFG K+ + + T + G
Sbjct: 183 VLA--LDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-G 236
Query: 213 TTGYLAPEYVLG----GQLTMKADVYSFGVLVLEIISG 246
T Y++PE + G + D +S GV + E++ G
Sbjct: 237 TPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ ++ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 107 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 153
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IAGTTGYL 217
+LH ++HRD+K N+ L+++ KIGDFGLA + + R + GT Y+
Sbjct: 154 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLCGTPNYI 206
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + + + DV+S G ++ ++ G+
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 54 IGRGGFGTVYKGTLTNGRRI---AVKPLSAESKQGVREFIT-EIMTLSNVRHPNLVELIG 109
+G+GGF ++ + + + + + P S K RE ++ EI ++ H ++V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 110 CCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV---------GIAKGLA 160
+ E+N V+L + L KR I G
Sbjct: 109 -------------FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ 155
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTR---IAGTTGYL 217
+LH ++HRD+K N+ L+++ KIGDFGLA + + R + GT Y+
Sbjct: 156 YLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLAT----KVEYDGERKKVLCGTPNYI 208
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISGR 247
APE + + + DV+S G ++ ++ G+
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 175
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 176 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 228
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 229 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 288
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 289 TEFKFPQIKAHPWTKVFR 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 84
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 142
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 143 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 195
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 196 FGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 95/220 (43%), Gaps = 26/220 (11%)
Query: 45 TDDFHLSNKIGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQ--GVREFITEIMTLSNVRH 101
+ DF L + +G G +G V T G +A+K + K +R + EI L + +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 102 PNLVELIGC----CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAK 157
N++ + + + + + + L RV+ ++ + + +
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQY-----FIYQTLR 123
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHIT---------T 208
+ LH +++HRD+K SN+L++ + K+ DFGLA++ ++ +
Sbjct: 124 AVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 209 RIAGTTGYLAPEYVL-GGQLTMKADVYSFGVLVLEIISGR 247
T Y APE +L + + DV+S G ++ E+ R
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 153
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 154 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 206
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 143
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+D++ ++ DFG AK + T + GT YLAPE
Sbjct: 144 LHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 196
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 87
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 145
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 146 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 198
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 199 FGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 91
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 149
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 150 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 202
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 203 FGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 153
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 154 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 206
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 207 FGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + + + RE + + + H N+V L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 102
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 160
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 161 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 213
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 214 FGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 82/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V + G A+K L + +++ + E L V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P L +L + +V EY + + + I +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEM----FSHLRRIGRFXEPHARFYAAQIVLTFEY 157
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ K+ DFG AK + T + GT YLAPE
Sbjct: 158 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 17/216 (7%)
Query: 54 IGRGGFGTV---YKGTLTNGRRIAVKPLSA--ESKQGVREFITEIMTLSNVRHPNLVELI 108
IG G G V Y L R +A+K LS +++ + E++ + V H N++ L+
Sbjct: 32 IGSGAQGIVCAAYDAILE--RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 109 GCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELV 167
Q + Y+ +D L + ++L+ E+ S + + G+ LH
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA-- 145
Query: 168 PHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQL 227
I+HRD+K SNI++ + KI DFGLA+ + + T Y APE +LG
Sbjct: 146 -GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 228 TMKADVYSFGVLVLEIISGR--NSGKAMWGQMNKFL 261
D++S G ++ E++ + G+ Q NK +
Sbjct: 203 KENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 35/297 (11%)
Query: 48 FHLSNKIGRGGFGTVYKGT-LTNGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHPNL 104
+ + +IG G FG +++GT L N +++A+K P +++ Q E+ T + PN+
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+G +LV + + + D + L K ++K + + + LA +
Sbjct: 72 YYF---GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQS 121
Query: 165 ELVPHIVHRDIKASNILLDQEFNPK------IGDFGLAKLFPDNIT--HITTR----IAG 212
+V+RDIK N L+ + N K + DFG+ K + D +T HI R ++G
Sbjct: 122 IHEKSLVYRDIKPDNFLIGRP-NSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 180
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEE 272
T Y++ LG + + + D+ + G + + + G + + NK E + ++
Sbjct: 181 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-KKQS 239
Query: 273 KPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI-RLNEEE 328
PL EL P E +YM + A P + + + +K + RLN E
Sbjct: 240 TPLR----ELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTE 289
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + QG E+ + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N+++I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR 247
G T DV+S G ++ E++ G+
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 130/297 (43%), Gaps = 35/297 (11%)
Query: 48 FHLSNKIGRGGFGTVYKGT-LTNGRRIAVK--PLSAESKQGVREFITEIMTLSNVRHPNL 104
+ + +IG G FG +++GT L N +++A+K P +++ Q E+ T + PN+
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 105 VELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHE 164
+G +LV + + + D + L K ++K + + + LA +
Sbjct: 71 YYF---GQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-------VAMAAKQMLARVQS 120
Query: 165 ELVPHIVHRDIKASNILLDQEFNPK------IGDFGLAKLFPDNIT--HITTR----IAG 212
+V+RDIK N L+ + N K + DFG+ K + D +T HI R ++G
Sbjct: 121 IHEKSLVYRDIKPDNFLIGRP-NSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 179
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEE 272
T Y++ LG + + + D+ + G + + + G + + NK E + ++
Sbjct: 180 TARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE-KKQS 238
Query: 273 KPLELVDPELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTKNI-RLNEEE 328
PL EL P E +YM + A P + + + +K + RLN E
Sbjct: 239 TPLR----ELCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTE 288
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++AVK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+L+D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNV 99
D + L IG+G F V + G++ AVK ++ + E +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+HP++VEL+ +V+E+++ L ++ A + S I + L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 216
+ H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT +
Sbjct: 146 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHF 201
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+APE V DV+ GV++ ++SG
Sbjct: 202 MAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+++DQ+ ++ DFG AK + T + GT YLAPE
Sbjct: 157 LHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
++ D ++ GVL+ E+ +G
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVK-----PLSAESKQGVREFITEIMTLSNV 99
D + L IG+G F V + G++ AVK ++ + E +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 100 RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGL 159
+HP++VEL+ +V+E+++ L ++ A + S I + L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 160 AFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGY 216
+ H+ +I+HRD+K +LL + N K+G FG+A ++ R+ GT +
Sbjct: 144 RYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHF 199
Query: 217 LAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
+APE V DV+ GV++ ++SG
Sbjct: 200 MAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT YLAP
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Query: 45 TDDFHLSNKIGRGGFGT----VYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
TD + + IG G + ++K T AVK + + E EI+ L +
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKAT---NXEFAVKIIDKSKRDPTEEI--EIL-LRYGQ 74
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGL 159
HPN++ L G +V E + L D++L + + S + I K +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF-----FSEREASAVLFTITKTV 129
Query: 160 AFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTG 215
+LH + V VHRD+K SNIL +D+ NP +I DFG AK + T T
Sbjct: 130 EYLHAQGV---VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TAN 185
Query: 216 YLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE + D++S GVL+ ++G
Sbjct: 186 FVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 32/258 (12%)
Query: 54 IGRGGFGTVYKGTLTN-GRRIAVKPLSAESKQGVREFITEIMTLSNVRHPNLVEL-IGCC 111
IG G FG VY+ L + G +A+K + QG E+ + + H N+V L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVRLRYFFY 83
Query: 112 VQGTRRILVY-----EYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
G ++ VY +YV ++ RV ++A L + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF- 141
Query: 167 VPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYV 222
I HRDIK N+LLD + K+ DFG AK N++ I +R Y APE +
Sbjct: 142 --GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPELI 194
Query: 223 LGG-QLTMKADVYSFGVLVLEIISGR-----NSGKAMWGQMNKFLLEWAWQLHQEEKP-- 274
G T DV+S G ++ E++ G+ +SG ++ K L + +E P
Sbjct: 195 FGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNY 254
Query: 275 LELVDPELGEYPPNEIIR 292
E P++ +P ++ R
Sbjct: 255 TEFAFPQIKAHPWTKVFR 272
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 22/214 (10%)
Query: 43 SATDDFHLSNKIGRGGFGTVYK------GTLTNGRRIAVKPLSAESKQGVREFITEIMTL 96
S TD++ L IG+G F V + G + I K LSA Q + E
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER---EARIC 57
Query: 97 SNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-I 155
++H N+V L + LV++ V L ++ + E + C+ I
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQI 112
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAG 212
+ + H+ V VHRD+K N+LL + K+ DFGLA + AG
Sbjct: 113 LEAVLHCHQMGV---VHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAG 168
Query: 213 TTGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
T GYL+PE + D+++ GV++ ++ G
Sbjct: 169 TPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 18/204 (8%)
Query: 51 SNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESK-QGVR-EFITEIMTLSNVRH-PNLVE 106
S ++GRG F V + + + G+ A K L + Q R E + EI L + P ++
Sbjct: 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVIN 93
Query: 107 LIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEEL 166
L + IL+ EY + + L + N R + I +G+ +LH+
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR--LIKQILEGVYYLHQN- 150
Query: 167 VPHIVHRDIKASNILLDQEF---NPKIGDFGLAKLFPDNITHITT--RIAGTTGYLAPEY 221
+IVH D+K NILL + + KI DFG+++ I H I GT YLAPE
Sbjct: 151 --NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEI 204
Query: 222 VLGGQLTMKADVYSFGVLVLEIIS 245
+ +T D+++ G++ +++
Sbjct: 205 LNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 45 TDDFHLSNKIGRGGFG----TVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
+D + + IG G + V+K T AVK + + E EI+ L +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEI--EIL-LRYGQ 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAKG 158
HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKT 133
Query: 159 LAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAGT 213
+ +LH + +VHRD+K SNIL +D+ NP +I DFG AK L +N +T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYT 188
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE + D++S G+L+ +++G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A+K +S A TE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 122
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 123 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 172
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 15/205 (7%)
Query: 46 DDFHLSNKIGRGGFGTVY-KGTLTNGRRIAVKPLSAESKQGVREF---ITEIMTLSNVRH 101
D F +G G FG V +G A+K L + +++ + E L V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
P LV+L + +V EYV + + + + I +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVLTFEY 156
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
LH +++RD+K N+L+DQ+ ++ DFG AK + T + GT LAPE
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEI 209
Query: 222 VLGGQLTMKADVYSFGVLVLEIISG 246
+L D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A+K +S A TE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 122
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 123 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 172
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A+K +S A TE
Sbjct: 5 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 64
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 65 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 121
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 122 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 171
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 172 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVRE---FITEIMT 95
E++ +DF + IGRG FG V + N RI A+K L+ E F E
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG- 154
L N + L LV +Y L +L +K KL E + +G
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLP-EDMARFYIGE 183
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ + +H+ H VHRDIK N+LLD + ++ DFG D+ T ++ GT
Sbjct: 184 MVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 240
Query: 215 GYLAPEYVLG-----GQLTMKADVYSFGVLVLEIISG 246
Y++PE + G+ + D +S GV + E++ G
Sbjct: 241 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A+K +S A TE
Sbjct: 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 66 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 122
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 123 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 172
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 173 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 28/213 (13%)
Query: 45 TDDFHLSNKIGRGGFG----TVYKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR 100
+D + + IG G + V+K T AVK + + E EI+ L +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEI--EIL-LRYGQ 79
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICV-GIAKG 158
HPN++ L G LV E + L D++L K E+ + + I K
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL------RQKFFSEREASFVLHTIGKT 133
Query: 159 LAFLHEELVPHIVHRDIKASNIL-LDQEFNP---KIGDFGLAK-LFPDNITHITTRIAGT 213
+ +LH + +VHRD+K SNIL +D+ NP +I DFG AK L +N +T T
Sbjct: 134 VEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYT 188
Query: 214 TGYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
++APE + D++S G+L+ +++G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVRE---FITEIMT 95
E++ +DF + IGRG FG V + N RI A+K L+ E F E
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG- 154
L N + L LV +Y L +L +K KL E + +G
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLL---SKFEDKLP-EDMARFYIGE 199
Query: 155 IAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTT 214
+ + +H+ H VHRDIK N+LLD + ++ DFG D+ T ++ GT
Sbjct: 200 MVLAIDSIHQ---LHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTP 256
Query: 215 GYLAPEYVLG-----GQLTMKADVYSFGVLVLEIISG 246
Y++PE + G+ + D +S GV + E++ G
Sbjct: 257 DYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A+K +S A TE
Sbjct: 12 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 71
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 72 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 128
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 129 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 178
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 179 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 113/280 (40%), Gaps = 41/280 (14%)
Query: 53 KIGRGGFGTVYKGTLTNGRRIAVKPLSAE--SKQGVREFITEIMTLSNVRHPNLVELIGC 110
K+ G ++KG G I VK L S + R+F E L HPN++ ++G
Sbjct: 17 KLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 111 CVQ--GTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLHEELVP 168
C L+ ++ SL VL T N ++ + + +A+G+AFLH L P
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHT-LEP 132
Query: 169 HIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEYVLGGQLT 228
I + + ++++D++ +I ++ + AP +V L
Sbjct: 133 LIPRHALNSRSVMIDEDMTARI-----------SMADVKFSFQSPGRMYAPAWVAPEALQ 181
Query: 229 MK--------ADVYSFGVLVLEIISGRNSGKAMWGQMNKFLLEWAWQLHQEEKPLELVDP 280
K AD++SF VL+ E+++ R A M + + LE + P
Sbjct: 182 KKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGM----------KVALEGLRP 230
Query: 281 ELGEYPPNEIIRYMKVAFFCTQAAASRRPQMNQVIKMLTK 320
+ PP K+ C ++RP+ + ++ +L K
Sbjct: 231 TI---PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 91/217 (41%), Gaps = 17/217 (7%)
Query: 40 ELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRI-AVKPLSAESKQGVRE---FITEIMT 95
++R +DF + IGRG FG V L N ++ A+K L+ E F E
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 96 LSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGI 155
L N + L LV +Y L +L +K +L E +
Sbjct: 128 LVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL---SKFEDRLPEEMARFYLAEM 184
Query: 156 AKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFG-LAKLFPDNITHITTRIAGTT 214
+ +H+ H VHRDIK NIL+D + ++ DFG KL D + + GT
Sbjct: 185 VIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTP 240
Query: 215 GYLAPEYVLG-----GQLTMKADVYSFGVLVLEIISG 246
Y++PE + G+ + D +S GV + E++ G
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 86 VREFITEIMTLSNVRHPNLVELIGCCVQGTRR--ILVYEYVENNSLDRV--LLGATKANI 141
+ + EI L + HPN+V+L+ +V+E V + V L ++
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 142 KLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPD 201
+ ++ + KG+ +LH + I+HRDIK SN+L+ ++ + KI DFG++ F
Sbjct: 140 RFYFQD-------LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG 189
Query: 202 NITHITTRIAGTTGYLAPEYVLGGQ--LTMKA-DVYSFGVLVLEIISGR 247
+ ++ + GT ++APE + + + KA DV++ GV + + G+
Sbjct: 190 SDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A++ +S A TE
Sbjct: 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 190
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 191 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 247
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 248 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 297
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 298 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 42 RSATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLS--------AESKQGVREFITE 92
++ D++ +S +G G G V +++A++ +S A TE
Sbjct: 145 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETE 204
Query: 93 IMTLSNVRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATK---ANIKLNWEKRS 149
I L + HP +++ I +V E +E L ++G + A KL + +
Sbjct: 205 IEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ-- 261
Query: 150 DICVGIAKGLAFLHEELVPHIVHRDIKASNILL---DQEFNPKIGDFGLAKLFPDNITHI 206
+ + +LHE I+HRD+K N+LL +++ KI DFG +K+ + T +
Sbjct: 262 -----MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSL 311
Query: 207 TTRIAGTTGYLAPEYVLG---GQLTMKADVYSFGVLVLEIISG 246
+ GT YLAPE ++ D +S GV++ +SG
Sbjct: 312 MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 89/209 (42%), Gaps = 22/209 (10%)
Query: 48 FHLSNKIGRGGFGTVYK------GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH 101
+ L ++G+G F V + G + I K LSA Q + E ++H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKH 80
Query: 102 PNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAKGLA 160
PN+V L + L+++ V L ++ + E + C+ I + +
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQILEAVL 135
Query: 161 FLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTTGYL 217
H+ V VHRD+K N+LL + K+ DFGLA + + AGT GYL
Sbjct: 136 HCHQMGV---VHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYL 191
Query: 218 APEYVLGGQLTMKADVYSFGVLVLEIISG 246
+PE + D+++ GV++ ++ G
Sbjct: 192 SPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 108/256 (42%), Gaps = 50/256 (19%)
Query: 21 APQGVDGELLRNVNHFSY-----TELRSATDDFHLSNKIGRGGFGTV------------- 62
P G ++L N ++ Y E +D+ + + +G F +
Sbjct: 1 GPLGSMKDILSNYSNLIYLNKYVKEKDKYINDYRIIRTLNQGKFNKIILCEKDNKFYALK 60
Query: 63 -YKGTLTNGRRIAVKP----LSAESKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRR 117
Y+ +L +R K +S +SK +F E+ ++++++ + G
Sbjct: 61 KYEKSLLEKKRDFTKSNNDKISIKSKYD--DFKNELQIITDIKNEYCLTCEGIITNYDEV 118
Query: 118 ILVYEYVENNSLDR------VLLGATKANIKLNWEKRSDICV--GIAKGLAFLHEELVPH 169
++YEY+EN+S+ + VL I + K C+ + +++H E +
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK----CIIKSVLNSFSYIHNE--KN 172
Query: 170 IVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG---YLAPEYVLGGQ 226
I HRD+K SNIL+D+ K+ DFG ++ D +I G+ G ++ PE+
Sbjct: 173 ICHRDVKPSNILMDKNGRVKLSDFGESEYMVD------KKIKGSRGTYEFMPPEFFSNES 226
Query: 227 LT--MKADVYSFGVLV 240
K D++S G+ +
Sbjct: 227 SYNGAKVDIWSLGICL 242
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN R+ VK L K+ + E+ L N+R N
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKI---KREVKILENLRGGTN 94
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
+++LI + LV+EY+ N ++ T +I+ + K L +
Sbjct: 95 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------YMYELLKALDY 147
Query: 162 LHEELVPHIVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H + I+HRD+K N+++D Q+ ++ D+GLA+ + R+A + + PE
Sbjct: 148 CHSK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY-HPAQEYNVRVA-SRYFKGPE 202
Query: 221 YVLGGQL-TMKADVYSFGVLVLEIISGR 247
++ Q+ D++S G ++ +I R
Sbjct: 203 LLVDYQMYDYSLDMWSLGCMLASMIFRR 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 47 DFHLSNK-IGRGGFGTVYKGTLTNGRR-IAVKPLSAESKQGVREFITEIMTLSNVRHPNL 104
D L +K +G G F K + AVK +S + ++ IT + HPN+
Sbjct: 11 DLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNI 68
Query: 105 VELIGCCVQGTRRILVYEYVENNSL-DRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
V+L LV E + L +R+ K + + S I + ++ +H
Sbjct: 69 VKLHEVFHDQLHTFLVMELLNGGELFERI-----KKKKHFSETEASYIMRKLVSAVSHMH 123
Query: 164 EELVPHIVHRDIKASNILLDQE---FNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
+ +VHRD+K N+L E KI DFG A+L P + + T T Y APE
Sbjct: 124 D---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPE 179
Query: 221 YVLGGQLTMKADVYSFGVLVLEIISGR 247
+ D++S GV++ ++SG+
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 22/212 (10%)
Query: 45 TDDFHLSNKIGRGGFGTVYK------GTLTNGRRIAVKPLSAESKQGVREFITEIMTLSN 98
T+++ L ++G+G F V + G I K LSA Q + E
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 99 VRHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVG-IAK 157
++HPN+V L + L+++ V L ++ + E + C+ I +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQILE 121
Query: 158 GLAFLHEELVPHIVHRDIKASNILLDQEFNP---KIGDFGLAKLFPDNITHITTRIAGTT 214
+ H+ V VHR++K N+LL + K+ DFGLA + + AGT
Sbjct: 122 AVLHCHQMGV---VHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTP 177
Query: 215 GYLAPEYVLGGQLTMKADVYSFGVLVLEIISG 246
GYL+PE + D+++ GV++ ++ G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN R+ VK L K+ + E+ L N+R N
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKI---KREVKILENLRGGTN 99
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
+++LI + LV+EY+ N ++ T +I+ + K L +
Sbjct: 100 IIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------YMYELLKALDY 152
Query: 162 LHEELVPHIVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H + I+HRD+K N+++D Q+ ++ D+GLA+ + R+A + + PE
Sbjct: 153 CHSK---GIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFY-HPAQEYNVRVA-SRYFKGPE 207
Query: 221 YVLGGQL-TMKADVYSFGVLVLEIISGR 247
++ Q+ D++S G ++ +I R
Sbjct: 208 LLVDYQMYDYSLDMWSLGCMLASMIFRR 235
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 45/255 (17%)
Query: 54 IGRGGFGT-VYKGTLTNGRRIAVKPLSAESKQ-GVREFITEIMTLSNVRHPNLVELIGCC 111
+G G GT VY+G N R +AVK + E RE +++ S+ HPN++ C
Sbjct: 32 LGHGAEGTIVYRGMFDN-RDVAVKRILPECFSFADRE--VQLLRESD-EHPNVIRYF--C 85
Query: 112 VQGTRRI----------LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
+ R+ + EYVE + L I L + S GLA
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEP----ITLLQQTTS--------GLAH 133
Query: 162 LHEELVPHIVHRDIKASNILLDQ-----EFNPKIGDFGLAKLFPDNITHITTR--IAGTT 214
LH +IVHRD+K NIL+ + I DFGL K + R + GT
Sbjct: 134 LHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTE 190
Query: 215 GYLAPEYV---LGGQLTMKADVYSFGVLVLEIIS--GRNSGKAMWGQMNKFLLEWAWQLH 269
G++APE + T D++S G + +IS GK++ Q N L +
Sbjct: 191 GWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCL 250
Query: 270 QEEKPLELVDPELGE 284
EK +++ EL E
Sbjct: 251 HPEKHEDVIARELIE 265
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 43/233 (18%)
Query: 54 IGRGGFGTV-YKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCC 111
+G G GTV ++G+ GR +AVK + + + EI L+ HPN++ C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 76
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGIAKGLAFLHEEL 166
+ T R L Y +E +L+ L +K N+KL E + IA G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 167 VPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDNITHITTRI--- 210
I+HRD+K NIL+ DQ+ + I DFGL K + T +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 211 AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 242
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 26/241 (10%)
Query: 39 TELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQG-----------VR 87
EL + + + I G +G V G + G +A+K + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 88 EFITEIMTLSNVRHPNLVELIGCCVQ----GTRRILVYEYVENNSLDRVLLGATKANIKL 143
+ EI L++ HPN++ L V ++ + + L +V+ I +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVI 131
Query: 144 NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+ + I GL LHE V VHRD+ NILL + I DF LA+ D
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 204 THITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKF 260
T Y APE V+ + T D++S G ++ E+ + + G + Q+NK
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246
Query: 261 L 261
+
Sbjct: 247 V 247
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 96/241 (39%), Gaps = 26/241 (10%)
Query: 39 TELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQG-----------VR 87
EL + + + I G +G V G + G +A+K + G +
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCK 74
Query: 88 EFITEIMTLSNVRHPNLVELIGCCVQ----GTRRILVYEYVENNSLDRVLLGATKANIKL 143
+ EI L++ HPN++ L V ++ + + L +V+ I +
Sbjct: 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI---HDQRIVI 131
Query: 144 NWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNI 203
+ + I GL LHE V VHRD+ NILL + I DF LA+ D
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGV---VHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 204 THITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKF 260
T Y APE V+ + T D++S G ++ E+ + + G + Q+NK
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKI 246
Query: 261 L 261
+
Sbjct: 247 V 247
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 92
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 145
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 146 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 200
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMI 225
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 92
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 145
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 146 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 200
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 201 LLVDYQMYDYSLDMWSLGCMLASMI 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 91
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 144
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 145 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 199
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 200 LLVDYQMYDYSLDMWSLGCMLASMI 224
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 98
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRF-------YMYEILKALDY 151
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 152 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 206
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 207 LLVDYQMYDYSLDMWSLGCMLASMI 231
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 47 DFHLSNKIGRGGFGTVYK-GTLTNGRRIAVK----PLSAESKQGVREFITEIMTLSNV-R 100
F +++G G +G V+K + +GR AVK P + + + E+ + V +
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARK--LAEVGSHEKVGQ 115
Query: 101 HPNLVELIGCCVQGTRRILVYEYVENNSLDR--VLLGATKANIKLNWEKRSDICVGIAKG 158
HP V L +G L E SL + GA+ ++ W D +
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQV-WGYLRDTLLA---- 169
Query: 159 LAFLHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTG--- 215
LA LH + +VH D+K +NI L K+GDFGL + + T AG
Sbjct: 170 LAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL-------LVELGTAGAGEVQEGD 219
Query: 216 --YLAPEYVLGGQLTMKADVYSFGVLVLEIISGRN--SGKAMWGQMNKFLL 262
Y+APE +L G ADV+S G+ +LE+ G W Q+ + L
Sbjct: 220 PRYMAPE-LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL 269
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 54 IGRGGFGTV-YKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCC 111
+G G GTV ++G+ GR +AVK + + + EI L+ HPN++ C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGIAKGLAFLHEEL 166
+ T R L Y +E +L+ L +K N+KL E + IA G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 167 VPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDNITHITTRI--- 210
I+HRD+K NIL+ DQ+ + I DFGL K +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 211 AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 103/229 (44%), Gaps = 39/229 (17%)
Query: 54 IGRGGFGTV-YKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCC 111
+G G GTV ++G+ GR +AVK + + + EI L+ HPN++ C
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 94
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGIAKGLAFLHEEL 166
+ T R L Y +E +L+ L +K N+KL E + IA G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 167 VPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDNITHITTRI--- 210
I+HRD+K NIL+ DQ+ + I DFGL K +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 211 AGTTGYLAPEYV---LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 256
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 46 DDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVRH-PN 103
DD+ L K+GRG + V++ +TN ++ VK L K+ + EI L N+R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKI---KREIKILENLRGGPN 93
Query: 104 LVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
++ L R LV+E+V N ++ T +I+ I K L +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRF-------YMYEILKALDY 146
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRIAGTTGYLAPE 220
H I+HRD+K N+++D E ++ D+GLA+ + + R+A + + PE
Sbjct: 147 CHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY-NVRVA-SRYFKGPE 201
Query: 221 YVLGGQL-TMKADVYSFGVLVLEII 244
++ Q+ D++S G ++ +I
Sbjct: 202 LLVDYQMYDYSLDMWSLGCMLASMI 226
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 104/263 (39%), Gaps = 56/263 (21%)
Query: 35 HFSYTELRSATDDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVRE------ 88
+F L +HL IG+G +G V + + N R A++ + +K +R+
Sbjct: 15 YFQGGSLLELQKKYHLKGAIGQGSYGVV-RVAIENQTR-AIRAIKIMNKNKIRQINPKDV 72
Query: 89 --FITEIMTLSNVRHPNLVELIGCCVQGTRRILVYEYVE------------NNSLDRVLL 134
TE+ + + HPN+ L LV E ++S + +
Sbjct: 73 ERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAM 132
Query: 135 GATKANI--------------------KLNWEKR----SDICVGIAKGLAFLHEELVPHI 170
K I L++ +R S+I I L +LH + I
Sbjct: 133 DVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GI 189
Query: 171 VHRDIKASNILL--DQEFNPKIGDFGLAKLF---PDNITHITTRIAGTTGYLAPEYVLGG 225
HRDIK N L ++ F K+ DFGL+K F + + T AGT ++APE +
Sbjct: 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTT 249
Query: 226 QLTM--KADVYSFGVLVLEIISG 246
+ K D +S GVL+ ++ G
Sbjct: 250 NESYGPKCDAWSAGVLLHLLLMG 272
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 9 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 68
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 69 KKKKIKREIKILQNLCG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 126
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 127 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 177 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 29 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 88
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 89 KKKKIKREIKILQNLXG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 146
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 147 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 196
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 197 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 241
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNLCG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 104/244 (42%), Gaps = 46/244 (18%)
Query: 38 YTELRSATDDFHLSNKIGRGGFGTVYKGT--LTNG--RRIAVKPLSAESKQGVREFITEI 93
Y + ++ F + +KIG G F +VY T L G +IA+K L S +R E+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIR-IAAEL 70
Query: 94 MTLSNV-RHPNLVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDIC 152
L+ N++ + C + ++ Y+E+ S +L L++++ +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS-------LSFQEVREYM 123
Query: 153 VGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKLFPDNITHITTRI- 210
+ + K L +H+ IVHRD+K SN L ++ + DFGLA+ D + +
Sbjct: 124 LNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 211 --------------------------AGTTGYLAPEYVLGG-QLTMKADVYSFGVLVLEI 243
AGT G+ APE + T D++S GV+ L +
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSL 240
Query: 244 ISGR 247
+SGR
Sbjct: 241 LSGR 244
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 10 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 69
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 70 KKKKIKREIKILQNLCG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 127
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 128 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 177
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 178 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 222
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNLCG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 9 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 68
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 69 KKKKIKREIKILQNLXG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 126
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 127 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 176
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 177 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 221
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNLXG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNLXG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNLXG--GPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 18/209 (8%)
Query: 46 DDFHLSNKIGRGGFGTVYKGTLTNGRRIAVKPLSAESKQGVREFIT--EIMTLSNVRHPN 103
+ + ++ +GRG FG V++ T+ ++ + +G + + EI L+ RH N
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV--KVKGTDQVLVKKEISILNIARHRN 62
Query: 104 LVELIGCCVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
++ L ++++E++ + LD + + +LN + + + L FLH
Sbjct: 63 ILHLHESFESMEELVMIFEFI--SGLD-IFERINTSAFELNEREIVSYVHQVCEALQFLH 119
Query: 164 EELVPHIVHRDIKASNILLDQEFNP--KIGDFGLAK-LFP-DNITHITTRIAGTTGYLAP 219
+ H DI+ NI+ + KI +FG A+ L P DN + T Y AP
Sbjct: 120 SHNIGHF---DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT----APEYYAP 172
Query: 220 EYVLGGQLTMKADVYSFGVLVLEIISGRN 248
E ++ D++S G LV ++SG N
Sbjct: 173 EVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 26 DGELLRNVNHFSYTELR---SATDDFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAE 81
D +LR ++ Y L DD+ + K+GRG + V++G + N + +K L
Sbjct: 8 DVNVLRPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV 67
Query: 82 SKQGVREFITEIMTLSNVRHPNLVELIGCCVQGTRRI--LVYEYVENNSLDRVLLGATKA 139
K+ ++ I + L + PN+V+L+ + L++EYV N + T
Sbjct: 68 KKKKIKREIKILQNL--MGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDY 125
Query: 140 NIKLNWEKRSDICVGIAKGLAFLHEELVPHIVHRDIKASNILLDQEFNP-KIGDFGLAKL 198
+I+ + K L + H + I+HRD+K N+++D E ++ D+GLA+
Sbjct: 126 DIRY-------YIYELLKALDYCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 175
Query: 199 FPDNITHITTRIAGTTGYLAPEYVLGGQ-LTMKADVYSFGVLVLEII 244
+ + R+A + + PE ++ Q D++S G + +I
Sbjct: 176 YHPGKEY-NVRVA-SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMI 220
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 95/216 (43%), Gaps = 28/216 (12%)
Query: 47 DFHLSNKIGRGGFGTVYKG-TLTNGRRIAVKPLSAESKQG---VREFIT---EIMTLSNV 99
++ L +G+GGFGTV+ G LT+ ++A+K + G + + +T E+ L V
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 100 R----HPNLVELIGC--CVQGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICV 153
HP ++ L+ +G +L + D + K + E S
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLG---EGPSRCFF 145
Query: 154 G-IAKGLAFLHEELVPHIVHRDIKASNILLD-QEFNPKIGDFGLAKLFPDNITHITTRIA 211
G + + H +VHRDIK NIL+D + K+ DFG L D T
Sbjct: 146 GQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE---PYTDFD 199
Query: 212 GTTGYLAPEYVLGGQL-TMKADVYSFGVLVLEIISG 246
GT Y PE++ Q + A V+S G+L+ +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 103/233 (44%), Gaps = 43/233 (18%)
Query: 54 IGRGGFGTV-YKGTLTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCC 111
+G G GTV ++G+ GR +AVK + + + EI L+ HPN++ C
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 76
Query: 112 VQGTRRILVYEYVENNSLDRVLLGATK----ANIKLNWEKRS-DICVGIAKGLAFLHEEL 166
+ T R L Y +E +L+ L +K N+KL E + IA G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 167 VPHIVHRDIKASNILL--------DQEFNPK-----IGDFGLAKLFPDNITHITTRI--- 210
I+HRD+K NIL+ DQ+ + I DFGL K +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 211 AGTTGYLAPEYV-------LGGQLTMKADVYSFGVLVLEIISGRNSGKAMWGQ 256
+GT+G+ APE + +LT D++S G + I+S GK +G
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS---KGKHPFGD 242
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 52 NKIGRGGFGTVYKGT-LTNGRRIAVKPLSAE--------SKQGVREFITEIMTLSNVRHP 102
+ +G G FG V+ + + VK + E + + EI LS V H
Sbjct: 30 SPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHA 89
Query: 103 NLVELIGCCV-QGTRRILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAF 161
N+++++ QG ++++ ++ + LD L + +L+ S I + + +
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKH--GSGLD--LFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 162 LHEELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKLFPDNITHITTRIAGTTGYLAPEY 221
L + I+HRDIK NI++ ++F K+ DFG A T GT Y APE
Sbjct: 146 LR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYT--FCGTIEYCAPEV 200
Query: 222 VLGGQLT-MKADVYSFGVLVLEIISGRN 248
++G + +++S GV + ++ N
Sbjct: 201 LMGNPYRGPELEMWSLGVTLYTLVFEEN 228
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 54 IGRGGFGTVYKGT-LTNGRRIAVKPLSAESKQGVREFITEIMTLSNVR-HPNLVELIGCC 111
+ GGF VY+ + +GR A+K L + ++ R I E+ + + HPN+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 112 VQGTRR--------ILVYEYVENNSLDRVLLGATKANIKLNWEKRSDICVGIAKGLAFLH 163
G +L+ E + ++ L ++ L+ + I + + +H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVE--FLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 164 EELVPHIVHRDIKASNILLDQEFNPKIGDFGLAKL---FPD 201
+ P I+HRD+K N+LL + K+ DFG A +PD
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPD 193
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,429,038
Number of Sequences: 62578
Number of extensions: 436873
Number of successful extensions: 3934
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 190
Number of HSP's that attempted gapping in prelim test: 1214
Number of HSP's gapped (non-prelim): 1155
length of query: 370
length of database: 14,973,337
effective HSP length: 100
effective length of query: 270
effective length of database: 8,715,537
effective search space: 2353194990
effective search space used: 2353194990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)