BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017508
         (370 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9EQH4|TAF8_MOUSE Transcription initiation factor TFIID subunit 8 OS=Mus musculus
           GN=Taf8 PE=2 SV=1
          Length = 308

 Score = 65.9 bits (159), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 27/193 (13%)

Query: 30  RAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDI 89
           R   ++ V+ +    GF+  + ++++ L+++   YI ++G+++        RT+  L DI
Sbjct: 32  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 91

Query: 90  IRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVE-SKEEIPFAQPIPQYPVIRSRRL 148
           +  + ++    GF               V  +  + + S+  +  A P+   PV      
Sbjct: 92  VVTLVEM----GFN--------------VDTLPAYAKRSQRMVITAPPVTNQPVTPK--- 130

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMAL 208
             +       P   HIPS  P FPDPHTYI TP + E  SD +  + + A QRR  E AL
Sbjct: 131 --ALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQILREKAASQRRDVERAL 188

Query: 209 LSLQQRLVCNGET 221
                 +   GET
Sbjct: 189 TRF---MAKTGET 198


>sp|Q7Z7C8|TAF8_HUMAN Transcription initiation factor TFIID subunit 8 OS=Homo sapiens
           GN=TAF8 PE=1 SV=1
          Length = 310

 Score = 65.9 bits (159), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 27/193 (13%)

Query: 30  RAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDI 89
           R   ++ V+ +    GF+  + ++++ L+++   YI ++G+++        RT+  L DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 90  IRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVE-SKEEIPFAQPIPQYPVIRSRRL 148
           +  + ++    GF               V  +  + + S+  +  A P+   PV      
Sbjct: 94  VVTLVEM----GFN--------------VDTLPAYAKRSQRMVITAPPVTNQPVTPK--- 132

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMAL 208
             +       P   HIPS  P FPDPHTYI TP + E  SD +  + + A QRR  E AL
Sbjct: 133 --ALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

Query: 209 LSLQQRLVCNGET 221
                 +   GET
Sbjct: 191 TRF---MAKTGET 200


>sp|A7MAZ4|TAF8_BOVIN Transcription initiation factor TFIID subunit 8 OS=Bos taurus
           GN=TAF8 PE=2 SV=1
          Length = 310

 Score = 65.9 bits (159), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 85/193 (44%), Gaps = 27/193 (13%)

Query: 30  RAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDI 89
           R   ++ V+ +    GF+  + ++++ L+++   YI ++G+++        RT+  L DI
Sbjct: 34  RRTLQVVVSSLLTEAGFESAEKASVETLTEMLQSYISEIGRSAKSYCEHTARTQPTLSDI 93

Query: 90  IRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVE-SKEEIPFAQPIPQYPVIRSRRL 148
           +  + ++    GF               V  +  + + S+  +  A P+   PV      
Sbjct: 94  VVTLVEM----GFN--------------VDTLPAYAKRSQRMVITAPPVTNQPVTPK--- 132

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMAL 208
             +       P   HIPS  P FPDPHTYI TP + E  SD +  + + A QRR  E AL
Sbjct: 133 --ALTAGQNRPHPPHIPSHFPEFPDPHTYIKTPTYREPVSDYQVLREKAASQRRDVERAL 190

Query: 209 LSLQQRLVCNGET 221
                 +   GET
Sbjct: 191 TRF---MAKTGET 200


>sp|Q7ZYA2|TAF8_XENLA Transcription initiation factor TFIID subunit 8 OS=Xenopus laevis
           GN=taf8 PE=2 SV=1
          Length = 293

 Score = 64.3 bits (155), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 27/193 (13%)

Query: 30  RAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDI 89
           R   ++ V+ +    GF   + +A+++L+++   Y+ ++G+++        RT+  L DI
Sbjct: 24  RRTLQVVVSSLLTEAGFDSAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 90  IRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVE-SKEEIPFAQPIPQYPVIRSRRL 148
           +  + ++    GF               V  +  + + S+  +  A P+   PV+     
Sbjct: 84  VVTLIEM----GFN--------------VDSLPAYAKRSQRMVITAPPVTNNPVVPK--- 122

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMAL 208
             +    +  P   HIPS  P FPDPHTYI TP + E   D +  + + A QRR  E AL
Sbjct: 123 --ALSAGDNKPHPAHIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 180

Query: 209 LSLQQRLVCNGET 221
                +    GET
Sbjct: 181 TRFMAK---TGET 190


>sp|Q6P0T2|TAF8_DANRE Transcription initiation factor TFIID subunit 8 OS=Danio rerio
           GN=taf8 PE=1 SV=1
          Length = 308

 Score = 63.2 bits (152), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 89/221 (40%), Gaps = 25/221 (11%)

Query: 1   MNHGGGESTSRSESRTDTSSDRPKAEDFSRAVSKMAVAQICESVGFQGFKDSALDALSDI 60
           M  G   S SRS S    +S     +   R   ++ V+ +    GF   + + ++ L+++
Sbjct: 7   MGSGSLNSGSRSGSSKTCTSPTENYQLARRRTLQVVVSALLTECGFDSAEKAVVETLTEM 66

Query: 61  AIRYICDLGKTSSFQANLACRTECNLFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKE 120
              YI ++G+ +        R+   L D++  + ++                 G  +   
Sbjct: 67  MQSYITEVGRCAKANCEHTARSTPTLSDVVITLVEM-----------------GFNVDTL 109

Query: 121 IIDFVESKEEIPFAQPIPQYPVIRSRRLIPSFEEMNETPPGKHIPSWLPAFPDPHTYIYT 180
            +    S+  +  A PI   PV+       S     +     HIPS  P FPDPHTYI T
Sbjct: 110 PVYAKRSQRMVITAPPITNAPVVPK-----SLTAGQKRTHPAHIPSHFPDFPDPHTYIRT 164

Query: 181 PMWNERKSDPRADKIELARQRRKAEMALLSLQQRLVCNGET 221
           P + E  SD +  + + A QRR  E AL     +    GET
Sbjct: 165 PTFREPVSDYQVVREKAASQRRDVERALTRFMAK---TGET 202


>sp|Q28J24|TAF8_XENTR Transcription initiation factor TFIID subunit 8 OS=Xenopus
           tropicalis GN=taf8 PE=2 SV=1
          Length = 293

 Score = 62.8 bits (151), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 24/180 (13%)

Query: 30  RAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDI 89
           R   ++ V+ +    GF+  + +A+++L+++   Y+ ++G+++        RT+  L DI
Sbjct: 24  RRTLQVVVSSLLTEAGFESAEKAAVESLTEMLQSYLSEIGRSAKSYCEHTARTQPTLPDI 83

Query: 90  IRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVE-SKEEIPFAQPIPQYPVIRSRRL 148
           +  + ++    GF               V+ +  + + S+  +  A P+   PV+  + L
Sbjct: 84  VVTLIEM----GFN--------------VESLPAYAKRSQRMVITAPPVTNNPVV-PKAL 124

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMAL 208
                  N+  P  HIPS  P FPDPHTYI TP + E   D +  + + A QRR  E AL
Sbjct: 125 SAG---QNKQHPA-HIPSHFPEFPDPHTYIKTPTYREPVCDYQVLREKAASQRRDVERAL 180


>sp|Q5F489|TAF3_CHICK Transcription initiation factor TFIID subunit 3 OS=Gallus gallus
           GN=TAF3 PE=2 SV=1
          Length = 930

 Score = 58.9 bits (141), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 20/125 (16%)

Query: 25  AEDFSRAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTEC 84
            E +SR + +++VAQIC+++G+   + SA D L+D+  RY+  LG+         C   C
Sbjct: 2   CETYSRWLLRVSVAQICQALGWDSVQVSACDLLTDVLQRYLQGLGR--------GCHRYC 53

Query: 85  NLFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGI-VKEIIDFVESKEEIPFAQPIPQYPVI 143
            L+     I D           ++G      G+ + E+ D++ + E + FA  IP +PV 
Sbjct: 54  ELYGRTDPILD-----------DVGDAFKLMGVNLHELEDYIHNIEPVTFAHQIPSFPVS 102

Query: 144 RSRRL 148
           ++  L
Sbjct: 103 KNNVL 107


>sp|Q5VWG9|TAF3_HUMAN Transcription initiation factor TFIID subunit 3 OS=Homo sapiens
           GN=TAF3 PE=1 SV=1
          Length = 929

 Score = 56.2 bits (134), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 23/149 (15%)

Query: 26  EDFSRAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECN 85
           E +SR++ +++VAQIC+++G+   + SA   L+D+  RY+  LG+     + L  RT+  
Sbjct: 3   ESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDPI 62

Query: 86  LFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVESKEEIPFAQPIPQYPVIRS 145
           L D+    +        MG +           + E+ D++ + E + F   IP +PV ++
Sbjct: 63  LDDVGEAFQ-------LMGVS-----------LHELEDYIHNIEPVTFPHQIPSFPVSKN 104

Query: 146 RRL---IPSFEEMNETPPGKHIPSWLPAF 171
             L    P  ++  E    ++IP +LP  
Sbjct: 105 NVLQFPQPGSKDAEER--KEYIPDYLPPI 131


>sp|Q03750|TAF8_YEAST Transcription initiation factor TFIID subunit 8 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=TAF8 PE=1
           SV=1
          Length = 510

 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 45/79 (56%)

Query: 159 PPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEMALLSLQQRLVCN 218
           P  K IPSWLP FP  HTY +TP +N   +D +  K E+ ++ +++E ALL+L + L   
Sbjct: 170 PLEKQIPSWLPNFPPDHTYKFTPEFNHPITDLKTIKKEIVKESQESEKALLNLNKSLSHI 229

Query: 219 GETGTSASRPANDEEELLK 237
                +   P  D+E+ ++
Sbjct: 230 SSASNTPQPPGLDDEDAIE 248


>sp|Q5HZG4|TAF3_MOUSE Transcription initiation factor TFIID subunit 3 OS=Mus musculus
           GN=Taf3 PE=1 SV=2
          Length = 932

 Score = 55.1 bits (131), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 23/150 (15%)

Query: 25  AEDFSRAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTEC 84
            E +SR++ +++VAQIC+++G+   + SA   L+D+  RY+  LG+     + L  RT+ 
Sbjct: 2   CESYSRSLLRVSVAQICQALGWDSVQLSACHLLTDVLQRYLQQLGRGCHRYSELYGRTDP 61

Query: 85  NLFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVESKEEIPFAQPIPQYPVIR 144
            L D+    +        MG             + E+ D++ + E + F   IP +PV +
Sbjct: 62  ILDDVGEAFQ-------LMGVN-----------LHELEDYIHNIEPVTFPHQIPSFPVSK 103

Query: 145 SRRL---IPSFEEMNETPPGKHIPSWLPAF 171
           +  L    P  ++  E     +IP +LP  
Sbjct: 104 NNVLQFPQPGSKDAEER--KDYIPDYLPPI 131


>sp|Q5ZMS1|TAF8_CHICK Transcription initiation factor TFIID subunit 8 OS=Gallus gallus
           GN=TAF8 PE=2 SV=1
          Length = 244

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 27/159 (16%)

Query: 64  YICDLGKTSSFQANLACRTECNLFDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIID 123
           YI ++G+++        RT+  L DI+  + ++    GF               V+ +  
Sbjct: 5   YISEIGRSAKSYCEHTARTQPTLSDIVVTLVEM----GFN--------------VETLPA 46

Query: 124 FVE-SKEEIPFAQPIPQYPVIRSRRLIPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPM 182
           + + S+  +  A P+   PV        +       P   HIP + P FPDPHTYI TP 
Sbjct: 47  YAKRSQRMVITAPPVTNQPVTPK-----ALTAGQNKPHPSHIPGYFPEFPDPHTYIKTPT 101

Query: 183 WNERKSDPRADKIELARQRRKAEMALLSLQQRLVCNGET 221
           + E  SD +  + + A QRR  E AL      +   GET
Sbjct: 102 YREPVSDYQVLREKAASQRRDVERALTRF---MAKTGET 137


>sp|Q9VWY6|TAF8_DROME Transcription initiation factor TFIID subunit 8 OS=Drosophila
           melanogaster GN=Taf8 PE=1 SV=1
          Length = 328

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 22/182 (12%)

Query: 27  DFSRAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNL 86
           D  R +    V+Q+    G     + +L+ L+ +    I ++G ++     L+ RT   +
Sbjct: 13  DPYRRILNKVVSQLLLDKGAGQASNHSLETLTQMLQALIWEIGNSAHNYCELSGRTMPTV 72

Query: 87  FDIIRGIEDLEVLKGFMGAAEIGKCLVGSGIVKEIIDFVESKEEIPFAQPIPQYPVIRSR 146
            D+                      L+  GI    +D    KE      PIP  P    +
Sbjct: 73  GDV-------------------SLALINMGISISNLDPYMRKET---HVPIPLPPQQTQQ 110

Query: 147 RLIPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQRRKAEM 206
           R +   +   + P   ++PS+ P  PDPH YI TP   +  ++  A + + A Q+R  E 
Sbjct: 111 RPLSLLQAGIKAPHPHYVPSYFPPMPDPHAYIRTPTHKQPVTEYEAIREKAACQKRDIEK 170

Query: 207 AL 208
           AL
Sbjct: 171 AL 172


>sp|Q9P6P0|TAF3_SCHPO Transcription initiation factor TFIID subunit 3
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=taf3 PE=3 SV=1
          Length = 155

 Score = 38.9 bits (89), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 41/71 (57%)

Query: 31  AVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDII 90
           ++ ++  +Q   + G    K S L++ +DI IRYI  L +T+  +A +  R+ C+L D+ 
Sbjct: 12  SLMRIFCSQTLRAAGIDRTKVSLLNSFTDITIRYIRLLSETAMAKAEVGRRSCCDLGDLR 71

Query: 91  RGIEDLEVLKG 101
             +E++ +L G
Sbjct: 72  LAMEEIGLLNG 82


>sp|O94706|TAF8_SCHPO Transcription initiation factor TFIID subunit 8
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=taf8 PE=3 SV=1
          Length = 222

 Score = 35.0 bits (79), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 47/198 (23%), Positives = 81/198 (40%), Gaps = 17/198 (8%)

Query: 36  AVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTECNLFDIIRGIED 95
            +A I + +GF     +A  +  +   +Y+ +  +  +    L+  T     D+   +  
Sbjct: 4   VIANILQQLGFDSMTKAAEASFVEAVDKYLRNSFRELALHTQLSKHTIPTTKDVALWLNL 63

Query: 96  LEVLKGFMGAAEIGKCL--VGSGIVKEIIDFVESKEEIP--FAQPIPQYPVIRSRRLIPS 151
           L +    +   E+ K L  +   I  E+       ++IP  F   +    V    +L+ S
Sbjct: 64  LNIPMSSLQT-ELEKYLKPLPPAINDELDRLANESQDIPSKFKSSLDSKMV---SQLLGS 119

Query: 152 FEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKIELARQR-RKAEMALLS 210
                  P   ++ + LP FP  HTY+ TP++  R + P+  + ELA Q  R AE AL  
Sbjct: 120 LAVSQNRP--AYVVNHLPPFPASHTYMATPVYPVRPTSPKQIR-ELATQESRLAEHAL-- 174

Query: 211 LQQRLVCNGETGTSASRP 228
              R + N     SA  P
Sbjct: 175 ---RKILNVNQPRSADSP 189


>sp|Q12297|TAF3_YEAST Transcription initiation factor TFIID subunit 3 OS=Saccharomyces
           cerevisiae (strain ATCC 204508 / S288c) GN=TAF3 PE=1
           SV=1
          Length = 353

 Score = 33.1 bits (74), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)

Query: 27  DFSRAVSKMAVAQICESVGFQGFKDSALDALSDIAIRYICDLGKTSSFQANLACRTE--C 84
           DF  A+ ++++ Q+ ++ GF   + S +D ++D+  +++  L    S  A   C  +   
Sbjct: 6   DFYFALLRISILQLLKAQGFDRARPSLVDVMTDLYAKFLSLLASEVSSIAQARCDQDDTI 65

Query: 85  NLFDIIRGIEDLEVLK 100
            L DI   +E+L ++K
Sbjct: 66  ALQDITLALENLGIVK 81


>sp|Q61468|MSLN_MOUSE Mesothelin OS=Mus musculus GN=Msln PE=1 SV=1
          Length = 625

 Score = 33.1 bits (74), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 22/95 (23%)

Query: 36  AVAQI-CESVGFQGFKDSALDALSDIAIRYICD---------------------LGKTSS 73
           A+A + C   G     +  + AL DI + Y+CD                     L K S 
Sbjct: 413 AIALVACYLRGGGQLDEDMVKALGDIPLSYLCDFSPQDLHSVPSSVMWLVGPQDLDKCSQ 472

Query: 74  FQANLACRTECNLFDIIRGIEDLEVLKGFMGAAEI 108
               L  +  C+ F  + G+E  E +K F+G A +
Sbjct: 473 RHLGLLYQKACSAFQNVSGLEYFEKIKTFLGGASV 507


>sp|Q3U4I7|PYRD2_MOUSE Pyridine nucleotide-disulfide oxidoreductase domain-containing
           protein 2 OS=Mus musculus GN=Pyroxd2 PE=2 SV=2
          Length = 580

 Score = 32.3 bits (72), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 149 IPSFEEMNETPPGKHIPSWLPAFPDPHTYIYTPMWNERKSDPRADKI 195
           IPS  +    PPG H+ S    +  P+T     +WNE++ +  ADK+
Sbjct: 437 IPSSLDPTLAPPGCHVVSLFTQY-TPYTLAGGKVWNEQEKNTYADKV 482


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.316    0.133    0.387 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 143,209,637
Number of Sequences: 539616
Number of extensions: 6377241
Number of successful extensions: 15245
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 15218
Number of HSP's gapped (non-prelim): 30
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)