BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017509
(370 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225449917|ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
vinifera]
gi|296081305|emb|CBI17749.3| unnamed protein product [Vitis vinifera]
Length = 553
Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust.
Identities = 283/371 (76%), Positives = 325/371 (87%), Gaps = 1/371 (0%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT 60
+KA N P +VK+LLPRGLINSGNLCFLNATLQAL+SC+PF+QLLQELR RDIPK GYPT
Sbjct: 183 LKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPFIQLLQELRIRDIPKVGYPT 242
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
LTAF FVS+FD P+ S KKK+++ ++ GRPFSP+MFE VLKNFTPDVPN ISGRPRQE
Sbjct: 243 LTAFAEFVSEFDMPTDLSLKKKDLNGVETGRPFSPAMFEGVLKNFTPDVPNKISGRPRQE 302
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
DAQEFLSF+MDQMHDELLKL+G +++NG ++LVS AE+DEWETVGPKNKSAVTRTQSF
Sbjct: 303 DAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVSSAEDDEWETVGPKNKSAVTRTQSF 362
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHLDI EA++TIEDALRLFSAPE LE
Sbjct: 363 VPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHLDILPEAIYTIEDALRLFSAPETLE 422
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGR 299
GYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF Y +QGSTKLHK V FPL+LVLGR
Sbjct: 423 GYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFYYDENQGSTKLHKPVTFPLELVLGR 482
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
+LLV+P+ EGRKYELVAT+THHGRDPSKGHYT DAR+ + WL FDD++V + TSKVLH
Sbjct: 483 ELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDARHHSGHWLRFDDSAVNVVSTSKVLH 542
Query: 360 DQAYVLFYKQV 370
+ YVLFYKQV
Sbjct: 543 EHPYVLFYKQV 553
>gi|356542965|ref|XP_003539934.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 530
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 280/363 (77%), Positives = 319/363 (87%)
Query: 8 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGF 67
V VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LRT ++PK GYPTLTAF F
Sbjct: 168 VMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTCNLPKVGYPTLTAFAEF 227
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
++ FD PS KK++ + GRPF P MFE VLKNFTPDVPNSISGRPRQEDAQEFLS
Sbjct: 228 ITQFDMPSITKLKKQDADTFESGRPFRPVMFEGVLKNFTPDVPNSISGRPRQEDAQEFLS 287
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
F+MDQMHDELLKL+G+S+S+NG+ ++LVS E+DEWETVGPKNKSAVTRTQSFLPS LS
Sbjct: 288 FVMDQMHDELLKLEGQSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRTQSFLPSELSG 347
Query: 188 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDAL LFSAPE LEGYRTS T
Sbjct: 348 IFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLT 407
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
AGVVTA+KSV+I TL KI+ILHLMRF YGSQGSTKLHK V FPL+LVLGRDLLV+PS
Sbjct: 408 AKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQGSTKLHKPVHFPLELVLGRDLLVSPST 467
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
EGRKYELVAT+THHG +PSKGHYTADA+Y N +WL FDD SV AIGT+KVLHDQAYVLFY
Sbjct: 468 EGRKYELVATITHHGMEPSKGHYTADAQYPNGRWLRFDDQSVFAIGTNKVLHDQAYVLFY 527
Query: 368 KQV 370
+Q+
Sbjct: 528 RQI 530
>gi|356531617|ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
max]
Length = 532
Score = 582 bits (1500), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/363 (76%), Positives = 318/363 (87%)
Query: 8 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGF 67
V VKD+LPRGLINSGNLCFLNAT+QAL+SCSPFV LLQ+LRTR++PK GYPTLTAF F
Sbjct: 170 VMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVGYPTLTAFAEF 229
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
++ FD PS KK++ + GRPF P MFE VLKNFTPDVPNSISGRPRQEDAQEFLS
Sbjct: 230 IAQFDMPSTTKVKKQDTDTFESGRPFRPVMFEVVLKNFTPDVPNSISGRPRQEDAQEFLS 289
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
F+MDQMHDELLKL+G S+S+NG+ ++LVS E+DEWETVGPKNKSAVTRTQSFLPS LS
Sbjct: 290 FVMDQMHDELLKLEGHSSSLNGSKSSLVSSVEDDEWETVGPKNKSAVTRTQSFLPSDLSG 349
Query: 188 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
IFGGQL+S+V+A+GN+ASATVQP+LLLHLDIY +AVHTIEDAL LFSAPE LEGYRTS T
Sbjct: 350 IFGGQLRSLVRAKGNRASATVQPYLLLHLDIYPDAVHTIEDALHLFSAPETLEGYRTSLT 409
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
AGVVTA+KSV+I TL KI+ILHLMRF YGSQGS KLHK V FPL+LVLGR+LLV+PS
Sbjct: 410 AKAGVVTARKSVRIVTLPKIMILHLMRFGYGSQGSIKLHKPVHFPLELVLGRELLVSPST 469
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
EGRKYELVAT+THHG +PSKGHYTADA+Y N +WL FDD SV AIGT+KVLHDQAYVLFY
Sbjct: 470 EGRKYELVATITHHGTEPSKGHYTADAQYPNGRWLRFDDQSVFAIGTNKVLHDQAYVLFY 529
Query: 368 KQV 370
+Q+
Sbjct: 530 RQM 532
>gi|357450917|ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 532
Score = 569 bits (1466), Expect = e-160, Method: Compositional matrix adjust.
Identities = 273/363 (75%), Positives = 312/363 (85%), Gaps = 3/363 (0%)
Query: 8 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGF 67
V VKDL PRGLINSGNLCFL+AT+QAL++CSPFVQLLQELRTR IPK GYPTL AF F
Sbjct: 173 VMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQLLQELRTRTIPKVGYPTLKAFAEF 232
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
V+ FD PSG + KKK+ + GR F P MFE VLKNFTPDVPNSISGRPRQEDAQEFLS
Sbjct: 233 VTQFDMPSGVNLKKKDTDSFEFGRAFCPVMFEDVLKNFTPDVPNSISGRPRQEDAQEFLS 292
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
F+MDQMHDELLKL+G+S+S+NG+ + LVS E+DEWETVGPKNKSAVTRTQSF+PS L+
Sbjct: 293 FVMDQMHDELLKLEGQSSSLNGSKSFLVSSVEDDEWETVGPKNKSAVTRTQSFIPSELNG 352
Query: 188 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
IFGGQL+S+V +GN+ SAT QP+ L+HLDI+ +AVHTIEDAL LFSAPE LEGYR S +
Sbjct: 353 IFGGQLQSLVITKGNR-SATNQPYRLIHLDIHPDAVHTIEDALHLFSAPETLEGYRASVS 411
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G AG TAKKS+KI+TL K++ILHLMRF YGSQGSTKL K V FPL+LVLGRDLLV+PS
Sbjct: 412 GKAG--TAKKSIKIKTLPKVMILHLMRFGYGSQGSTKLLKPVHFPLELVLGRDLLVSPST 469
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
EGRKYELVAT+THHGR+PSKGHYTADA+Y N +WL FDDASV AI T+KVLHDQAYVLFY
Sbjct: 470 EGRKYELVATITHHGREPSKGHYTADAQYPNGRWLRFDDASVFAIATNKVLHDQAYVLFY 529
Query: 368 KQV 370
KQ+
Sbjct: 530 KQI 532
>gi|255544103|ref|XP_002513114.1| conserved hypothetical protein [Ricinus communis]
gi|223548125|gb|EEF49617.1| conserved hypothetical protein [Ricinus communis]
Length = 605
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 273/337 (81%), Positives = 299/337 (88%), Gaps = 1/337 (0%)
Query: 34 ALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPF 93
AL+SCSPFVQLLQ LRTR+IPK G+PTLTAF FVS+FD PS SS KK+ ++++ GRPF
Sbjct: 270 ALLSCSPFVQLLQNLRTRNIPKVGFPTLTAFAQFVSEFDMPSS-SSLKKDTAIVETGRPF 328
Query: 94 SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 153
SP+MFE VLK FTPDVPN ISGRPRQEDAQEFLSFIMDQMHDELLKL+G+ NGA ++
Sbjct: 329 SPAMFEGVLKKFTPDVPNCISGRPRQEDAQEFLSFIMDQMHDELLKLEGQFACTNGAKSS 388
Query: 154 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 213
LVS E+DEWETVGPKNKSAVTRTQSF+PS LSDIFGGQL+SVVKA GNKASATVQPFLL
Sbjct: 389 LVSSTEDDEWETVGPKNKSAVTRTQSFIPSELSDIFGGQLRSVVKATGNKASATVQPFLL 448
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
LHLDIY EAV TIEDAL LFSA ENLEGYR TG AG+VTA+KSVKIQTLSKI+ILHLM
Sbjct: 449 LHLDIYPEAVRTIEDALHLFSALENLEGYRAPVTGKAGIVTARKSVKIQTLSKIMILHLM 508
Query: 274 RFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTAD 333
RFSYGSQGSTKLHK V FPL+LVLGR+LLV+PS E RKYELVAT+THHGR+PSKGHYTAD
Sbjct: 509 RFSYGSQGSTKLHKPVHFPLELVLGRELLVSPSTESRKYELVATITHHGREPSKGHYTAD 568
Query: 334 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
AR N WLHFDDASVTAIGTSKVLHDQAYVLFY+QV
Sbjct: 569 ARCPNGHWLHFDDASVTAIGTSKVLHDQAYVLFYRQV 605
>gi|297798878|ref|XP_002867323.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
gi|297313159|gb|EFH43582.1| ubiquitin-specific protease 24 [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 264/371 (71%), Positives = 307/371 (82%), Gaps = 3/371 (0%)
Query: 2 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTL 61
K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQLLQ ++ +DIPKA PTL
Sbjct: 181 KVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQRIQLQDIPKADSPTL 240
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+NFTPDV N++SGRPRQED
Sbjct: 241 AAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQED 299
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDEWETVGPKNKSAVTRTQS 179
AQEFLSFIMDQMHDELLKL+ +S + + ++++S A ++DEWETVGPKNKSAVTRTQS
Sbjct: 300 AQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDDDEWETVGPKNKSAVTRTQS 359
Query: 180 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
F+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+L
Sbjct: 360 FVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVKGIEDALHLFSAQEDL 419
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 299
EGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKLHK V+FPL+L L R
Sbjct: 420 EGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLHKGVKFPLELNLNR 479
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
+ LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDD SVTAIGT +VLH
Sbjct: 480 NHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDPSVTAIGTKQVLH 539
Query: 360 DQAYVLFYKQV 370
DQAYVLFYKQV
Sbjct: 540 DQAYVLFYKQV 550
>gi|18417689|ref|NP_567860.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|42573095|ref|NP_974644.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|334187041|ref|NP_001190875.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|75262799|sp|Q9FPS3.1|UBP24_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 24; AltName:
Full=Deubiquitinating enzyme 24; Short=AtUBP24; AltName:
Full=Ubiquitin thioesterase 24; AltName:
Full=Ubiquitin-specific-processing protease 24
gi|11993488|gb|AAG42762.1|AF302672_1 ubiquitin-specific protease 24 [Arabidopsis thaliana]
gi|332660424|gb|AEE85824.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|332660425|gb|AEE85825.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
gi|332660426|gb|AEE85826.1| ubiquitin carboxyl-terminal hydrolase 24 [Arabidopsis thaliana]
Length = 551
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/372 (70%), Positives = 305/372 (81%), Gaps = 3/372 (0%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT 60
+K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQLLQ+++ +DIPKA PT
Sbjct: 181 LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT 240
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
L AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+NFTPDV N++SGRPRQE
Sbjct: 241 LAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQE 299
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED--EWETVGPKNKSAVTRTQ 178
DAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D EWETVGPKNKSAVTRTQ
Sbjct: 300 DAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQ 359
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
SF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+
Sbjct: 360 SFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQED 419
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L
Sbjct: 420 LEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLN 479
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDDASVT IGT VL
Sbjct: 480 RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL 539
Query: 359 HDQAYVLFYKQV 370
HDQAYVLFYKQV
Sbjct: 540 HDQAYVLFYKQV 551
>gi|222423693|dbj|BAH19813.1| AT4G30890 [Arabidopsis thaliana]
Length = 551
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/372 (70%), Positives = 305/372 (81%), Gaps = 3/372 (0%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT 60
+K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQLLQ+++ +DIPKA PT
Sbjct: 181 LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT 240
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
L AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+NFTPDV N++SGRPRQE
Sbjct: 241 LAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQE 299
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED--EWETVGPKNKSAVTRTQ 178
DAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D EWETVGPKNKSAVTRTQ
Sbjct: 300 DAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQ 359
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
SF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+
Sbjct: 360 SFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQED 419
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L
Sbjct: 420 LEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLN 479
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDDASVT IGT VL
Sbjct: 480 RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL 539
Query: 359 HDQAYVLFYKQV 370
HDQAYVLFYKQV
Sbjct: 540 HDQAYVLFYKQV 551
>gi|449507688|ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
sativus]
Length = 542
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/369 (70%), Positives = 303/369 (82%), Gaps = 1/369 (0%)
Query: 2 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTL 61
+A N V S LLPRGLINSGNLCFLN+TLQAL+SC PFV LL+ L+ R+IPK GY TL
Sbjct: 175 RASNVSVTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLQNREIPKVGYSTL 234
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
TAFV F+S + PS + ++++ D+G+PFSP MF+ VLKNF+PD+P+ I GRPRQED
Sbjct: 235 TAFVEFISALEVPSS-TVLNRDVAASDVGKPFSPLMFDGVLKNFSPDLPSGILGRPRQED 293
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
AQEFLSF+MD+MH ELLKL G+S+S NG + +V+ AE+DEWETVG KN++AV RTQSF+
Sbjct: 294 AQEFLSFVMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWETVGRKNRTAVMRTQSFV 353
Query: 182 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 241
PS LS+IFGGQL S+VKA+GNK SAT+QPFL LHLDI +AV TIEDALRLFSAPE LEG
Sbjct: 354 PSELSEIFGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRTIEDALRLFSAPETLEG 413
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 301
YR SS G AGVV A KSVKIQ SKI+ILHL RF YGS GSTKL+K V FPL+LVL RDL
Sbjct: 414 YRPSSAGKAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKLNKPVHFPLELVLNRDL 473
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
LV+ S EGRKYELVAT+THHGR+ SKGHYTAD RY N+QWL FDDASVTAIG + VLHD+
Sbjct: 474 LVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDDASVTAIGKNNVLHDR 533
Query: 362 AYVLFYKQV 370
AYVLFYKQV
Sbjct: 534 AYVLFYKQV 542
>gi|449451721|ref|XP_004143610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
sativus]
Length = 522
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 258/369 (69%), Positives = 302/369 (81%), Gaps = 1/369 (0%)
Query: 2 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTL 61
+A N V S LLPRGLINSGNLCFLN+TLQAL+SC PFV LL+ L+ R+IPK GY TL
Sbjct: 155 RASNVSVTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLQNREIPKVGYSTL 214
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
TAFV F+S + PS + ++++ D+G+PF P MF+ VLKNF+PD+P+ I GRPRQED
Sbjct: 215 TAFVEFISALEVPSS-TVLNRDVAASDVGKPFIPLMFDGVLKNFSPDLPSGILGRPRQED 273
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
AQEFLSF+MD+MH ELLKL G+S+S NG + +V+ AE+DEWETVG KN++AV RTQSF+
Sbjct: 274 AQEFLSFVMDRMHAELLKLDGKSSSTNGGKSFVVASAEDDEWETVGRKNRTAVMRTQSFV 333
Query: 182 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 241
PS LS+IFGGQL S+VKA+GNK SAT+QPFL LHLDI +AV TIEDALRLFSAPE LEG
Sbjct: 334 PSELSEIFGGQLTSMVKAKGNKPSATLQPFLSLHLDICPDAVRTIEDALRLFSAPETLEG 393
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 301
YR SS G AGVV A KSVKIQ SKI+ILHL RF YGS GSTKL+K V FPL+LVL RDL
Sbjct: 394 YRPSSAGKAGVVAASKSVKIQKQSKIMILHLKRFGYGSHGSTKLNKPVHFPLELVLNRDL 453
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
LV+ S EGRKYELVAT+THHGR+ SKGHYTAD RY N+QWL FDDASVTAIG + VLHD+
Sbjct: 454 LVSSSTEGRKYELVATITHHGRESSKGHYTADVRYHNNQWLRFDDASVTAIGKNNVLHDR 513
Query: 362 AYVLFYKQV 370
AYVLFYKQV
Sbjct: 514 AYVLFYKQV 522
>gi|224072837|ref|XP_002303905.1| predicted protein [Populus trichocarpa]
gi|222841337|gb|EEE78884.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/284 (82%), Positives = 255/284 (89%)
Query: 87 LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTS 146
++ GRPF P+MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM QMHDELLKL+G+S+
Sbjct: 12 VETGRPFRPAMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMHQMHDELLKLEGQSSG 71
Query: 147 INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA 206
NG T++VS EEDEWETVGPKNKSAVTRTQSF+PS LSDIFGGQL+SVVKA+GNKASA
Sbjct: 72 TNGFKTSVVSSTEEDEWETVGPKNKSAVTRTQSFIPSELSDIFGGQLRSVVKARGNKASA 131
Query: 207 TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSK 266
TVQPFLLLHLDI+ E V TIEDAL LFSAPENLEGYRTS+ G +GVVTAKKSVKIQTLSK
Sbjct: 132 TVQPFLLLHLDIHLEVVRTIEDALHLFSAPENLEGYRTSAIGKSGVVTAKKSVKIQTLSK 191
Query: 267 ILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPS 326
I+ILHLMRFSYGSQGS KL K V FPL+ +L R+LLV+PS E RKYELVATVTHHGR+PS
Sbjct: 192 IMILHLMRFSYGSQGSAKLLKPVHFPLEFILSRELLVSPSTESRKYELVATVTHHGREPS 251
Query: 327 KGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
KGHYTAD R+ N QWL FDDASVTAI TSKVLHDQAYVLFYKQV
Sbjct: 252 KGHYTADVRHSNGQWLRFDDASVTAITTSKVLHDQAYVLFYKQV 295
>gi|293334949|ref|NP_001170649.1| uncharacterized protein LOC100384703 [Zea mays]
gi|238006636|gb|ACR34353.1| unknown [Zea mays]
gi|414591099|tpg|DAA41670.1| TPA: ubiquitin carboxyl-terminal hydrolase [Zea mays]
Length = 552
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 233/357 (65%), Positives = 281/357 (78%), Gaps = 3/357 (0%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L+P+GL N+GN+CFLNATLQAL+SCSPFV LLQ+LR R IPK GYPTL AFV +S FD
Sbjct: 199 LIPQGLRNTGNICFLNATLQALLSCSPFVHLLQDLRNRSIPKFGYPTLRAFVELISQFDV 258
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+KKK + +P +P+MF+ VL+NFTPDVP I+ RPRQEDAQEFLSF MD++
Sbjct: 259 LDESVNKKKEKATTVAAKPLNPAMFDDVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRV 318
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
HDELLKL G ++ +VS + +D WETVG KNKSA+ RT SF+PS LS IFGGQL
Sbjct: 319 HDELLKLNG--NGLDSKEGMVVSSSADDAWETVGRKNKSAIVRTHSFVPSELSAIFGGQL 376
Query: 194 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 253
+SVVKA GNKASATVQPFLLLHLDI+ +AV T+ DALRLFS PE+LEGYRT++ G AG+V
Sbjct: 377 QSVVKAAGNKASATVQPFLLLHLDIFPDAVQTLNDALRLFSTPESLEGYRTTA-GKAGLV 435
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA+KS KI L KI+ILHL RFSYG+ GSTK++K + F +LVL RDLL +PS EGRKYE
Sbjct: 436 TARKSFKIHALPKIMILHLKRFSYGNNGSTKIYKPLGFTSELVLSRDLLSSPSQEGRKYE 495
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
LVAT+THHGRDP +GHYTA A++ + QWL FDD +V +G + VLHDQAYVLFYKQV
Sbjct: 496 LVATITHHGRDPYRGHYTAHAKHADGQWLRFDDDAVVPVGENDVLHDQAYVLFYKQV 552
>gi|326520702|dbj|BAJ92714.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 739
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 232/359 (64%), Positives = 281/359 (78%), Gaps = 3/359 (0%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K LLP GL N+GN+CFLNATLQA +SC PFVQL+Q+L+ R+IPKAGYPTL+AF+ VS F
Sbjct: 384 KPLLPHGLKNTGNICFLNATLQAFLSCFPFVQLVQDLKNRNIPKAGYPTLSAFIELVSQF 443
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
D + KK L + +P+MF+ VL+NFTPDVP S RPRQEDAQEFLSF MD
Sbjct: 444 DVLDESTMKKDERFALVAAKVINPTMFDQVLRNFTPDVPAGTSARPRQEDAQEFLSFAMD 503
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+MHDELL+L G +N +VS ++D WETVG KNKSA+ RTQSF+PS LS IFGG
Sbjct: 504 RMHDELLRLNG--NGLNSKEGMVVSSDDDDAWETVGRKNKSAIMRTQSFVPSDLSAIFGG 561
Query: 192 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
+L+SVVKA GNKASATVQPFLLLHLDI+ +AV T++DAL LFS PE+LEGYRT++ G AG
Sbjct: 562 KLQSVVKAAGNKASATVQPFLLLHLDIFPDAVQTLDDALHLFSTPESLEGYRTTA-GKAG 620
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
VVTA+KS KI LSKI+ILHL RFSYG++G TKL+K + FPL+LVL RDLL +PS+EGR+
Sbjct: 621 VVTARKSFKIHELSKIMILHLKRFSYGNRGCTKLYKPLHFPLELVLNRDLLSSPSSEGRR 680
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
YELVAT+THHG P++GHYTADA+ QWL FDD V I +KVLH+ AY+LFYKQV
Sbjct: 681 YELVATITHHGSGPARGHYTADAKRDGGQWLRFDDGHVMPIHVNKVLHNPAYILFYKQV 739
>gi|34395185|dbj|BAC83574.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 669
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 283/365 (77%), Gaps = 12/365 (3%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 311 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 370
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
D + KK + PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD
Sbjct: 371 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 430
Query: 132 QMHDELLKLQGESTSINGANTA---LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+MHDEL+KL G NG+N+ +VS ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 431 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 485
Query: 189 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G
Sbjct: 486 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 544
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 545 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 604
Query: 309 ---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
R+YELVAT+TH G +PS+GHYTADA+ + QWL FDD +VT + +KVLHDQAYVL
Sbjct: 605 HMQSRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVL 664
Query: 366 FYKQV 370
FYKQ+
Sbjct: 665 FYKQL 669
>gi|115473875|ref|NP_001060536.1| Os07g0661300 [Oryza sativa Japonica Group]
gi|113612072|dbj|BAF22450.1| Os07g0661300, partial [Oryza sativa Japonica Group]
Length = 489
Score = 469 bits (1208), Expect = e-130, Method: Compositional matrix adjust.
Identities = 230/365 (63%), Positives = 283/365 (77%), Gaps = 12/365 (3%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 131 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 190
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
D + KK + PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD
Sbjct: 191 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 250
Query: 132 QMHDELLKLQGESTSINGANTA---LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+MHDEL+KL G NG+N+ +VS ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 251 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 305
Query: 189 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G
Sbjct: 306 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 364
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 365 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 424
Query: 309 ---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
R+YELVAT+TH G +PS+GHYTADA+ + QWL FDD +VT + +KVLHDQAYVL
Sbjct: 425 HMQSRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPVSLNKVLHDQAYVL 484
Query: 366 FYKQV 370
FYKQ+
Sbjct: 485 FYKQL 489
>gi|147817822|emb|CAN75583.1| hypothetical protein VITISV_036537 [Vitis vinifera]
Length = 275
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 215/275 (78%), Positives = 243/275 (88%), Gaps = 1/275 (0%)
Query: 97 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 156
MFE VLKNFTPDVPN ISGRPRQEDAQEFLSF+MDQMHDELLKL+G +++NG ++LVS
Sbjct: 1 MFEGVLKNFTPDVPNKISGRPRQEDAQEFLSFVMDQMHDELLKLEGFFSNLNGGKSSLVS 60
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
AE+DEWETVGPKNKSAVTRTQSF+PS LS IFGGQL+SVVKA+GNKASATVQPFLLLHL
Sbjct: 61 SAEDDEWETVGPKNKSAVTRTQSFVPSELSKIFGGQLRSVVKARGNKASATVQPFLLLHL 120
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI EA++TIEDALRLFSAPE LEGYRTS TG AG+VTA KSVKIQ LS+I+ILHLMRF
Sbjct: 121 DILPEAIYTIEDALRLFSAPETLEGYRTSGTGKAGLVTASKSVKIQKLSEIMILHLMRFY 180
Query: 277 YG-SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR 335
Y +QGSTKLHK V FPL+LVLGR+LLV+P+ EGRKYELVAT+THHGRDPSKGHYT DAR
Sbjct: 181 YDENQGSTKLHKPVTFPLELVLGRELLVSPTTEGRKYELVATITHHGRDPSKGHYTTDAR 240
Query: 336 YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
+ + WL FDD++V + TSKVLH+ YVLFYKQV
Sbjct: 241 HHSGHWLRFDDSAVNVVSTSKVLHEHPYVLFYKQV 275
>gi|222637619|gb|EEE67751.1| hypothetical protein OsJ_25454 [Oryza sativa Japonica Group]
Length = 738
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/347 (62%), Positives = 267/347 (76%), Gaps = 12/347 (3%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 312 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 371
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
D + KK + PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD
Sbjct: 372 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 431
Query: 132 QMHDELLKLQGESTSINGANTA---LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+MHDEL+KL G NG+N+ +VS ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 432 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 486
Query: 189 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G
Sbjct: 487 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 545
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 546 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 605
Query: 309 ---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI 352
R+YELVAT+TH G +PS+GHYTADA+ + QWL FDD +VT +
Sbjct: 606 HMQSRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPL 652
>gi|218200195|gb|EEC82622.1| hypothetical protein OsI_27205 [Oryza sativa Indica Group]
Length = 737
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 216/347 (62%), Positives = 267/347 (76%), Gaps = 12/347 (3%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K LLP GL N+GN+CFLN++LQAL+SC PFVQLLQ LR ++IPKAGYPTL AF+ F+S F
Sbjct: 311 KPLLPHGLKNTGNICFLNSSLQALLSCWPFVQLLQNLRNQNIPKAGYPTLNAFIEFISQF 370
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
D + KK + PSMF+ VL+NFTPDVP + RPRQEDAQEFLSF MD
Sbjct: 371 DVLDDSNVKKDEKFATIASKSVIPSMFDTVLRNFTPDVPAGTASRPRQEDAQEFLSFAMD 430
Query: 132 QMHDELLKLQGESTSINGANTA---LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+MHDEL+KL G NG+N+ +VS ++D WETVG KNKSA+ R+QSF+PS L+ I
Sbjct: 431 RMHDELVKLNG-----NGSNSKEGMIVSSNDDDAWETVGKKNKSAIMRSQSFVPSELTAI 485
Query: 189 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
FGGQL+S VKA GNKAS TVQPF L+HLDI+ +AV ++DALRLF+APE+LEGYRT++ G
Sbjct: 486 FGGQLQSCVKATGNKASVTVQPFRLIHLDIFPDAVQKLDDALRLFAAPESLEGYRTAA-G 544
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
AG+VTA+KSVKI +LSKI+ILHL RFSYGS G TKL K + FPL+LVL RDLL +PS+E
Sbjct: 545 KAGLVTARKSVKIHSLSKIMILHLKRFSYGSHGCTKLFKPIHFPLELVLSRDLLSSPSSE 604
Query: 309 ---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI 352
R+YELVAT+TH G +PS+GHYTADA+ + QWL FDD +VT +
Sbjct: 605 HMQSRRYELVATITHLGANPSRGHYTADAKSASGQWLRFDDDNVTPL 651
>gi|22022542|gb|AAM83229.1| AT4g30890/F6I18_200 [Arabidopsis thaliana]
gi|23308335|gb|AAN18137.1| At4g30890/F6I18_200 [Arabidopsis thaliana]
Length = 276
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/276 (73%), Positives = 231/276 (83%), Gaps = 2/276 (0%)
Query: 97 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 156
MFE VL+NFTPDV N++SGRPRQEDAQEFLSFIMDQMHDELLKL+ +S + + ++++S
Sbjct: 1 MFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVIS 60
Query: 157 LAEED--EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 214
A +D EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLL
Sbjct: 61 SANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLL 120
Query: 215 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 274
HLDI+ + V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMR
Sbjct: 121 HLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMR 180
Query: 275 FSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA 334
FSYGSQGSTKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DA
Sbjct: 181 FSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDA 240
Query: 335 RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
R N QWL FDDASVT IGT VLHDQAYVLFYKQV
Sbjct: 241 RRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 276
>gi|413968370|gb|AFW90523.1| ubiquitin carboxyl-terminal hydrolase 24-like protein [Phaseolus
vulgaris]
Length = 530
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 170/210 (80%), Positives = 188/210 (89%)
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWETVGPKNKSAVTRTQS PS LS IFGGQL+S+VKA+GNK SATVQP+LLLHLDIY
Sbjct: 321 DEWETVGPKNKSAVTRTQSLAPSELSCIFGGQLQSMVKAKGNKPSATVQPYLLLHLDIYP 380
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 280
+ VHTIEDALRLFSA E LEGYR S T AGVVTA+KSV+I TL KI+ILHLMRF YGSQ
Sbjct: 381 DTVHTIEDALRLFSASEALEGYRASLTAKAGVVTARKSVQIVTLPKIMILHLMRFGYGSQ 440
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 340
GSTKLHK+V FPL+LVLGRDLLV+PS EGRKYELVAT+THHGR+PSKGHYTADA+Y N +
Sbjct: 441 GSTKLHKAVHFPLELVLGRDLLVSPSTEGRKYELVATITHHGREPSKGHYTADAQYPNGR 500
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
WL FDDASV AIGT+KVLHDQAYVLFY+Q+
Sbjct: 501 WLRFDDASVFAIGTNKVLHDQAYVLFYRQL 530
>gi|2980777|emb|CAA18204.1| putative protein [Arabidopsis thaliana]
gi|7269990|emb|CAB79807.1| putative protein [Arabidopsis thaliana]
Length = 463
Score = 340 bits (872), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 171/269 (63%), Positives = 205/269 (76%), Gaps = 22/269 (8%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT 60
+K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQLLQ+++ +DIPKA PT
Sbjct: 181 LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT 240
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-- 118
L AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+NFTPDV N++SGRPR
Sbjct: 241 LAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRLV 299
Query: 119 -----------------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED 161
EDAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D
Sbjct: 300 TPLHSLNFDGSSVLNSSYEDAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDD 359
Query: 162 --EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
EWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+
Sbjct: 360 GDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIH 419
Query: 220 SEAVHTIEDALRLFSAPENLEGYRTSSTG 248
+ V IEDAL LFSA E+LEGYR S TG
Sbjct: 420 PDGVQGIEDALHLFSAQEDLEGYRASVTG 448
>gi|168036283|ref|XP_001770637.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678158|gb|EDQ64620.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 336 bits (861), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 166/277 (59%), Positives = 216/277 (77%), Gaps = 11/277 (3%)
Query: 97 MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVS 156
MF+ VL++F+PD P GRPRQEDAQEFLS +MD++H+ELL L+G S I G N +
Sbjct: 1 MFDDVLRSFSPDQPPR--GRPRQEDAQEFLSHVMDRLHEELLWLEGRS--IVGQN----A 52
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
+ +++EWE VGPKNKSA+TRT + S LSDIFGGQL SVVKA+GNKASATVQPFL+LHL
Sbjct: 53 VVDDEEWEIVGPKNKSALTRTHMTIKSPLSDIFGGQLCSVVKAKGNKASATVQPFLVLHL 112
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+AV +IEDALR F+APE+LEGY+ +S+ + VV+A K++KIQ+L +LI+HLMRFS
Sbjct: 113 DILSDAVQSIEDALRFFAAPESLEGYKAASSKASEVVSASKAIKIQSLPSVLIVHLMRFS 172
Query: 277 YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTAD 333
YG+ GS KL+K++++ L +GR+LL T + EGRKYELVATVTHHG +PS GHYTAD
Sbjct: 173 YGASGSGKLNKAIKYSNSLTIGRELLATSTGSATEGRKYELVATVTHHGNNPSTGHYTAD 232
Query: 334 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
R + +WL FDDA V+ + ++VL + YVLFYK+V
Sbjct: 233 CRQPDGRWLRFDDAVVSVVPINQVLQEHTYVLFYKRV 269
>gi|326669691|ref|XP_685621.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
[Danio rerio]
Length = 865
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/406 (35%), Positives = 226/406 (55%), Gaps = 48/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 469 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLFSETQRPCTS 524
Query: 58 YPTLTAFVGFVSDFDT---PSGG---SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 111
P + F+ V++F PS ++ +K + L +G PF P+ +L + +
Sbjct: 525 TPMMDNFIRLVNEFSNMPVPSKAKQQAAGEKILKDLRVGAPFEPTYVYKLLTL----IKS 580
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANT--------ALVS 156
S+S + RQEDA+E+L FI++ +H+E+L L + ++ + NG + A
Sbjct: 581 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLISPQEEKAPTPNGPESQPGVEEDPAEKE 640
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
+DEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 641 EGSDDEWEQVGPRNKTSITRQADFIRTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 700
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI SE + T+++AL + A E+++GY T S + + V ++ L +L+LHL RF
Sbjct: 701 DIQSEKIRTVQEALEVLVARESVQGYTTKSKQE---IEISRRVTLEELPPVLVLHLKRFV 757
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
+ + G KL K++ +P+ L + +DLL +P G R Y L A V HHG + GH
Sbjct: 758 FEKTGGCQKLIKTIDYPVDLEISKDLL-SPGVRGKTMKGQRTYRLFAVVYHHGNSATGGH 816
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
YT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 817 YTTDVFHIGLNGWLRIDDQAVKIINQHQVVKQTAERTAYLLYYRRV 862
>gi|148225368|ref|NP_001080643.1| ubiquitin carboxyl-terminal hydrolase 10-B [Xenopus laevis]
gi|82176651|sp|Q7ZXR7.1|UB10B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-B; AltName:
Full=Deubiquitinating enzyme 10-B; AltName:
Full=Ubiquitin thioesterase 10-B; AltName:
Full=Ubiquitin-specific-processing protease 10-B
gi|28277342|gb|AAH44285.1| Usp10-prov protein [Xenopus laevis]
Length = 805
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 58 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F + P +K+ K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKVIKDIRPGAPFEPTYIYRLLTVFK----SS 521
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 159
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQE 581
Query: 160 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 217
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 278 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 330
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEVSKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 331 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
T D + WL DD SV I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQSVKVINQYQVVKQTVERTAYLLYYRRV 802
>gi|260805678|ref|XP_002597713.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
gi|229282980|gb|EEN53725.1| hypothetical protein BRAFLDRAFT_217385 [Branchiostoma floridae]
Length = 402
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/391 (36%), Positives = 215/391 (54%), Gaps = 41/391 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L PRGL+N GN C++NATLQA+++C P L++ + P PT T + + +F +
Sbjct: 16 LQPRGLVNKGNWCYINATLQAMVACPPMYNLMKNMPLPSSPNKRGPTATPILDCLMEFTS 75
Query: 74 PSGGS-------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
G + KK L G PF P+ +L + +++S + RQEDA+EFL
Sbjct: 76 EFGSMPNSQKTIAGKKPAQDLRPGSPFEPTYVYHMLSL----IKSTLSSKGRQEDAEEFL 131
Query: 127 SFIMDQMHDELL-KLQGESTSI-----------NGANTALVSLAEE---DEWETVGPKNK 171
S +++ +H+E+ K+ GE T +GA + EE DEWE VGPKNK
Sbjct: 132 SCVLNGIHEEMQPKMNGELTPKSDGPSSPTPREDGAVEGFMMEQEEGDEDEWEQVGPKNK 191
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
S VTRT +F+ + +SDIFGGQL+S+ G + SAT+QPF L LDI SE + T++DAL
Sbjct: 192 STVTRTANFVRTPVSDIFGGQLRSIFHQHGTRESATLQPFFTLQLDIQSEKIWTVKDALE 251
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVR 290
E + GY S T V A + + I+ L +L+LHL RF Y + GS K+ K V
Sbjct: 252 AMVTKETIHGYTCSKTKQE--VEASRRMMIEELPPVLVLHLKRFVYDKTGGSQKVQKRVD 309
Query: 291 FPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 343
F ++L + ++LL +P+ + R Y L A V HHG++ + GHYT D + + WL
Sbjct: 310 FNIELDINKELL-SPAVKNKLHQGQRTYRLFAVVYHHGKNATGGHYTTDVFHVGINGWLR 368
Query: 344 FDDASVTAIGTSKVLH----DQAYVLFYKQV 370
FDD +V + + +V+ Y+L+Y++
Sbjct: 369 FDDQNVKVVTSQQVMKYTPPRVPYLLYYRRC 399
>gi|147902172|ref|NP_001090293.1| ubiquitin carboxyl-terminal hydrolase 10-A [Xenopus laevis]
gi|123895418|sp|Q2NL57.1|UB10A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10-A; AltName:
Full=Deubiquitinating enzyme 10-A; AltName:
Full=Ubiquitin thioesterase 10-A; AltName:
Full=Ubiquitin-specific-processing protease 10-A
gi|84708827|gb|AAI10954.1| MGC132196 protein [Xenopus laevis]
Length = 791
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 49/406 (12%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451
Query: 58 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + +FV +++F P + + + V DI G PF P+ +L F +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 159
S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVNKEEQ 566
Query: 160 ---EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 567 EGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQL 626
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF
Sbjct: 627 DIQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFV 683
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
+ + G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GH
Sbjct: 684 FEKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGH 742
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 743 YTTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 788
>gi|375152198|gb|AFA36557.1| putative ubiquitin-specific protease, partial [Lolium perenne]
Length = 168
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 117/172 (68%), Positives = 138/172 (80%), Gaps = 5/172 (2%)
Query: 110 PNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPK 169
P S RPRQEDAQEFLSF MD+MHDELLKL G N +VS +++D WETVG K
Sbjct: 1 PAGTSARPRQEDAQEFLSFAMDRMHDELLKLNGS----NSKEGMVVSASDDDAWETVGRK 56
Query: 170 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 229
NKSA+ RTQS +PS LS IFGG+L+S+VKA GNK SAT+QPFLLLHLDI+ +AVHT+EDA
Sbjct: 57 NKSAIMRTQSLVPSELSAIFGGELQSMVKAAGNKPSATIQPFLLLHLDIFPDAVHTVEDA 116
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
L LFS PE+LEGYRT++ G AGVVTA+KS +I TLSKI+ILHL RFSYG+ G
Sbjct: 117 LHLFSTPESLEGYRTAA-GKAGVVTARKSFQIHTLSKIMILHLKRFSYGNHG 167
>gi|55742513|ref|NP_001006761.1| ubiquitin carboxyl-terminal hydrolase 10 [Xenopus (Silurana)
tropicalis]
gi|82183396|sp|Q6DIJ4.1|UBP10_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|49522494|gb|AAH75544.1| ubiquitin specific peptidase 10 [Xenopus (Silurana) tropicalis]
gi|89273888|emb|CAJ83514.1| ubiquitin specific protease 10 [Xenopus (Silurana) tropicalis]
Length = 805
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 58 YPTLTAFVGFVSDF-DTP----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F + P + +S +K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIYRLLTVFK----SS 521
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 159
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQE 581
Query: 160 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 217
++EWE VGP++KS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 278 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 330
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 331 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
T D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 802
>gi|387019601|gb|AFJ51918.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crotalus adamanteus]
Length = 783
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 148/404 (36%), Positives = 225/404 (55%), Gaps = 47/404 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL----RTRDIPKA 56
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + +T+ P
Sbjct: 390 VKLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMFSKTQR-PCT 444
Query: 57 GYPTLTAFVGFVSDFDTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + +FV +++F K+ +S DI G F P+ +L + +
Sbjct: 445 STPMIDSFVRLMNEFTNMPVPPKAKQALSDKIARDIRPGAAFEPTYIYRLLTV----IKS 500
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKLQG----ESTSINGANTALVSLAEE------- 160
S+S + RQEDA+E+L FI++ +H+E+L L+ S NG T LV+ +E
Sbjct: 501 SLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSEISNGPETQLVNEEDEQEEQGEG 560
Query: 161 --DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 218
DEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LDI
Sbjct: 561 SEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQLDI 620
Query: 219 YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY- 277
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 621 QSDRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFVYE 677
Query: 278 GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYT 331
+ G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT
Sbjct: 678 KTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHYT 736
Query: 332 ADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 737 TDVFQIGLNGWLRIDDQAVKVITQHQVVKPSAERTAYLLYYRRV 780
>gi|47230410|emb|CAF99603.1| unnamed protein product [Tetraodon nigroviridis]
Length = 832
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 221/406 (54%), Gaps = 47/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 57
+K I++PV L PRGL+N GN C++NATLQAL++C P L++ L P
Sbjct: 435 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALVACPPMYHLMKSIPLLNETQRPCTS 490
Query: 58 YPTLTAFVGFVSDF-DTPSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + FV V++F + P +K++ + V DI G PF P+ +L + +
Sbjct: 491 TPMIDNFVRLVNEFSNMPVPSKAKQQGVGDKVVKDIRPGVPFEPTYIYKLLTL----IKS 546
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 159
S+S + RQEDA+E+L F ++ +H+E+L L Q E + + E
Sbjct: 547 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLVLPQEEKAPPPNGPESQPGMEEDAADKD 606
Query: 160 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 215
EDEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 607 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 666
Query: 216 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 275
LDI SE + T+++AL A E+++GY ++ N + + V ++ L +L+LHL RF
Sbjct: 667 LDIQSEKIRTVQEALETMVARESVQGY---TSKNKQEIEISRRVTLEELPPVLVLHLKRF 723
Query: 276 SY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-----RKYELVATVTHHGRDPSKGH 329
+ + G KL K++ +P+ L + +DLL + R Y L A V HHG + GH
Sbjct: 724 VFEKTGGCQKLSKNIDYPVDLEISKDLLSSGVRSKVLKGQRTYRLFAVVYHHGNSATGGH 783
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
YT D + + WL DD +V I ++L AY+L+Y++V
Sbjct: 784 YTTDVFHIGLNGWLRIDDQAVKVINQYQLLKQSVERTAYLLYYRRV 829
>gi|449282514|gb|EMC89347.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Columba livia]
Length = 787
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 219/406 (53%), Gaps = 48/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
++ I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 391 VRLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 446
Query: 58 YPTLTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 447 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 502
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 156
+S + RQEDA+E+L FI++ +H+E+L L+ E ++ NG V
Sbjct: 503 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLAVSNGPEAQTVHEEEEQDEQG 562
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 563 EGSEDEWEQVGPRNKSSVTRQADFIQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 622
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 623 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 679
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
Y + G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GH
Sbjct: 680 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGH 738
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 739 YTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERSAYLLYYRRV 784
>gi|57524928|ref|NP_001006130.1| ubiquitin carboxyl-terminal hydrolase 10 [Gallus gallus]
gi|75571288|sp|Q5ZJN4.1|UBP10_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|53133460|emb|CAG32059.1| hypothetical protein RCJMB04_16o18 [Gallus gallus]
Length = 785
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444
Query: 58 YPTLTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 156
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 561 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 620
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 621 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 677
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
Y + G KL K++ +P+ L + ++LL +P + R Y L A V HHG + H
Sbjct: 678 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGDH 736
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 737 YTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 782
>gi|149038330|gb|EDL92690.1| ubiquitin specific protease 10 [Rattus norvegicus]
Length = 795
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 43/392 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 70
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 409 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 468
Query: 71 FDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 469 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 524
Query: 126 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 170
L FI++ +H+E+L L+ E S+ NG + L+ E EDEWE VGPKN
Sbjct: 525 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 584
Query: 171 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 585 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 644
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 289
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 645 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 701
Query: 290 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 702 EYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 760
Query: 343 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
DD +V I +V+ AY+L+Y++V
Sbjct: 761 RIDDQTVKVINQYQVVRPSADRTAYLLYYRRV 792
>gi|77628029|ref|NP_001029318.1| ubiquitin carboxyl-terminal hydrolase 10 [Rattus norvegicus]
gi|123780598|sp|Q3KR59.1|UBP10_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|76779344|gb|AAI05893.1| Ubiquitin specific peptidase 10 [Rattus norvegicus]
Length = 794
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 43/392 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 70
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 408 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 467
Query: 71 FDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 468 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 523
Query: 126 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 170
L FI++ +H+E+L L+ E S+ NG + L+ E EDEWE VGPKN
Sbjct: 524 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 583
Query: 171 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 584 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 643
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 289
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 644 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 700
Query: 290 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 701 EYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 759
Query: 343 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
DD +V I +V+ AY+L+Y++V
Sbjct: 760 RIDDQTVKVINQYQVVRPSADRTAYLLYYRRV 791
>gi|414887984|tpg|DAA63998.1| TPA: hypothetical protein ZEAMMB73_048281, partial [Zea mays]
Length = 368
Score = 228 bits (580), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 108/172 (62%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
LLP GL N+GN+CFLNATLQAL+SCSPFV LLQ+LR R IPK GYPTL+AFV +S D
Sbjct: 199 LLPHGLRNTGNICFLNATLQALLSCSPFVYLLQDLRNRRIPKVGYPTLSAFVELISQLDV 258
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P KK + +P +P+MF+AVL+NFTPDVP I+ RPRQEDAQEFLSF MD+M
Sbjct: 259 PDESVIKKNEKVITVAAKPLNPAMFDAVLRNFTPDVPAGITARPRQEDAQEFLSFAMDRM 318
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
HDELLKL G+ +N +VS A++D WETVG KNKSA+ RTQSF+PS L
Sbjct: 319 HDELLKLNGD--GLNSKEGMVVSSADDDAWETVGRKNKSAIVRTQSFVPSEL 368
>gi|410913199|ref|XP_003970076.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Takifugu
rubripes]
Length = 871
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 47/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE---LRTRDIPKAG 57
+K I++PV L PRGL+N GN C++NATLQAL++C P L++ L P
Sbjct: 474 VKLIHKPVS----LQPRGLVNKGNWCYINATLQALIACPPMYHLMKSIPMLSETQRPCTS 529
Query: 58 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + FV V++F+ P +K++ + + DI G PF P+ +L + +
Sbjct: 530 TPMMDNFVRLVNEFNNMPVPSKAKQQAVGDKVMKDIRPGVPFEPTYIYKLLTL----IKS 585
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 159
S+S + RQEDA+E+L F ++ +H+E+L L Q E + + E
Sbjct: 586 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESQSGVEEDAADKD 645
Query: 160 ----EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLH 215
EDEWE VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 646 EEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQ 705
Query: 216 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 275
LDI SE + T+++AL A E+++GY TS T + + V ++ L +L+LHL RF
Sbjct: 706 LDIQSEKIRTVQEALETMVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKRF 762
Query: 276 SY-GSQGSTKLHKSVRFPLQLVLGRDLLV----TPSAEG-RKYELVATVTHHGRDPSKGH 329
+ + G KL K++ +P+ L + +DLL + +G R Y L A V HHG + GH
Sbjct: 763 VFEKTGGCQKLSKNIDYPVDLEISKDLLSSGVRSKVVKGQRTYRLFAVVYHHGNSATGGH 822
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
YT D + + WL DD +V I +L AY+L+Y++V
Sbjct: 823 YTTDVFHIGLNGWLRIDDQAVKVINQYHLLKQSAERTAYLLYYRRV 868
>gi|354465458|ref|XP_003495197.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Cricetulus griseus]
Length = 792
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPTADRTAYLLYYRRV 789
>gi|395508418|ref|XP_003758509.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sarcophilus
harrisii]
Length = 1048
Score = 227 bits (578), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 221/401 (55%), Gaps = 46/401 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 657 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 712
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 713 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 768
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 161
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG T V E ED
Sbjct: 769 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPETHSVPEDEQEQGEGSED 828
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI SE
Sbjct: 829 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSE 888
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 280
+HT++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 889 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 945
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 334
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 946 GCQKLIKNIEYPVDLEISRELL-SPGVKNKNFKGHRNYRLFAVVYHHGNSATGGHYTTDV 1004
Query: 335 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 1005 FQIGLNGWLRIDDQAVKVITQYQVVKPSAERTAYLLYYRRV 1045
>gi|344238013|gb|EGV94116.1| Ubiquitin carboxyl-terminal hydrolase 10 [Cricetulus griseus]
Length = 772
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 435
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + L+ E E
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKLTVSNGPRSHLIEDEEQEDTGEGSE 551
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 669 GGCQKLVKNIDYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 727
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 728 VFQIGLNGWLRIDDQTVKVINQYQVVKPTADRTAYLLYYRRV 769
>gi|334312992|ref|XP_001375064.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Monodelphis domestica]
Length = 825
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/401 (36%), Positives = 219/401 (54%), Gaps = 46/401 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI---PKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 434 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKVQRPCTSTPM 489
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 490 IDSFVRLMNEFTNMPIPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 545
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------ED 161
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + V E ED
Sbjct: 546 KGRQEDAEEYLGFILNGLHEEMLNLKKLLLPNNEKFSVSNGPDAQSVHEDEQGQGEGSED 605
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+
Sbjct: 606 EWEQVGPRNKTSVTRQADFIQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 665
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 280
+HT++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 666 KIHTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 722
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 334
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 723 GCQKLIKNIEYPVDLEISRELL-SPGVKNKNFKGHRNYRLFAVVYHHGNSATGGHYTTDV 781
Query: 335 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 782 FQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 822
>gi|149640242|ref|XP_001510486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
[Ornithorhynchus anatinus]
Length = 793
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/403 (35%), Positives = 222/403 (55%), Gaps = 48/403 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDI-PKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L T++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFVPLYTKEQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F PS + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPSKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + + EE
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKFSVSNGPEAPIANEDEEQDDQGDGS 571
Query: 161 -DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
DEW+ VGP+NK+++TR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI
Sbjct: 572 EDEWKQVGPRNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQ 631
Query: 220 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 278
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEK 688
Query: 279 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTA 332
+ G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT
Sbjct: 689 TGGCQKLIKNIDYPVDLEISKELL-SPGVKSKNFKGHRTYRLFAVVYHHGNSATGGHYTT 747
Query: 333 DARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 DVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 790
>gi|350584818|ref|XP_003126873.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Sus scrofa]
Length = 481
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 89 IHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVFSKVQRPCTSTPM 144
Query: 61 LTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F + P ++ K + + G F P+ +L + +S+S
Sbjct: 145 IDSFVRLMNEFTNMPVPPKPRQALGDKVMRDIRPGAAFEPTYIYRLLTV----IKSSLSE 200
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + LV E E
Sbjct: 201 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPDNEKLTVSNGPQSHLVDEDEQEEPGEGSE 260
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 261 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 320
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 321 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 377
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 378 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 436
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 437 VFQIGLNGWLRIDDQTVKVINQYQVVKPAAERTAYLLYYRRV 478
>gi|328868647|gb|EGG17025.1| ubiquitin hydrolase B [Dictyostelium fasciculatum]
Length = 1019
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/404 (35%), Positives = 207/404 (51%), Gaps = 57/404 (14%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP-KAGYPTLTAFVGFVSD-FDTP 74
+G++N+ N CF+N LQ+L+ C PFV+LL+ + + P + YPTL F D F T
Sbjct: 621 KGMVNTSNTCFMNVILQSLIGCQPFVKLLKSISDSEGPSQTKYPTLHHLKQFHDDYFSTI 680
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS-----------ISGRPR----- 118
++ K +S +P +P F ++K+F + IS + R
Sbjct: 681 QVSNNTSKYVSS---PQPINPKYFGDIVKSFNSKIAPPSPSPIIPFSVPISNKKRTKLTI 737
Query: 119 ------------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----ED 161
Q+DAQEFL++ +D +H+E + L E + + E D
Sbjct: 738 YEAVQQQSLNSCQQDAQEFLTYFLDLIHEEFVSLLKEIEGPKEEKQMVQPILEPTTKDND 797
Query: 162 EWETVGPKNKSAVT--RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
WE VG KNK++ T + S +S IF G ++S V +K S T+QPF LHLD+
Sbjct: 798 GWEIVGAKNKTSTVNDHTTNLNGSPISQIFSGTMRSSVNRSESKESVTLQPFYCLHLDVR 857
Query: 220 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS 279
E+VHT+E+AL LF E LEGY S+ G VTA KS+ I+ L KILI+H RF+Y +
Sbjct: 858 PESVHTLEEALSLFMKEETLEGYTCSTKGVE--VTASKSMSIEVLPKILIVHFKRFAYDT 915
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTP--------------SAEGRKYELVATVTHHGRDP 325
+ KL K + FP L L P +A +KY L++ V+HHG+
Sbjct: 916 EAQ-KLDKFISFPTTLTLKSHNSHAPPPSQPQTFASTILAAASAKKYSLLSVVSHHGKGL 974
Query: 326 SKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
S+GHYT D N QW+ FDDA V+ I +VL+ +AY+L Y+Q
Sbjct: 975 SQGHYTCDVLQPNLQWMRFDDALVSEITEQEVLNREAYLLLYQQ 1018
>gi|326927485|ref|XP_003209923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Meleagris
gallopavo]
Length = 816
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 145/415 (34%), Positives = 219/415 (52%), Gaps = 57/415 (13%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 411 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 466
Query: 58 YPTLTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 467 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 522
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 156
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 523 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVHEEEEQDEQG 582
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 583 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 642
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 643 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 699
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVA---------TVTH 320
Y + G KL K++ +P+ L + ++LL +P + R Y L A V H
Sbjct: 700 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAAHHKFLFSQVVYH 758
Query: 321 HGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
HG + GHYT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 HGNSATGGHYTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 813
>gi|449472364|ref|XP_002194358.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Taeniopygia
guttata]
Length = 792
Score = 224 bits (570), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 146/406 (35%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
++ I++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VRLIHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 451
Query: 58 YPTLTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 112
P L +FV +++F P + V DI G F P+ +L + +S
Sbjct: 452 TPMLDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 507
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 156
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 508 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKVSVSNGPEAQSVPKEEEQEEQG 567
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+Q F L L
Sbjct: 568 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQLFFTLQL 627
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+ + T++DAL A E+++GY T + V + + ++ L +L+LHL RF
Sbjct: 628 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRLTLEKLPPVLVLHLKRFV 684
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
Y + G KL K++ + + L + ++LL +P + R Y L A V HHG + GH
Sbjct: 685 YEKTGGCQKLIKNIEYTVDLEISKELL-SPGVKSKISKGQRTYRLFAVVYHHGNSATGGH 743
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKV----LHDQAYVLFYKQV 370
YT D + WL DD +V I S+V L AY+L+Y+QV
Sbjct: 744 YTTDVFQIGLNGWLRIDDQAVRVIHHSQVVKAALERTAYLLYYRQV 789
>gi|156382482|ref|XP_001632582.1| predicted protein [Nematostella vectensis]
gi|156219640|gb|EDO40519.1| predicted protein [Nematostella vectensis]
Length = 412
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/406 (35%), Positives = 213/406 (52%), Gaps = 59/406 (14%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT--------- 62
K LL RGL+N N C++NATLQAL+ C PF L++++ IP+ T T
Sbjct: 12 KPLLLRGLVNKANWCYINATLQALLVCPPFFNLMRQVEL--IPEREASTSTPILDSIPLV 69
Query: 63 ------AFVGFVSDFDTPS---GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI 113
V + P+ ++ K S G PS +L + +++
Sbjct: 70 TTNINPCMVVIFGNLYCPALLFSANTGKTPKSDFRTGPNLEPSYIGKMLAT----IESTL 125
Query: 114 SGRPRQEDAQEFLSFIMDQMHDELLKL----------------QGESTSINGANTALVSL 157
S + QEDA+EFLS +++ +H+E++ L +G +N ++
Sbjct: 126 SAKGHQEDAEEFLSCLLNGIHEEMIVLSKLDPPLPKPESHESSEGVQDDLNIVAVEGQTM 185
Query: 158 AEEDE----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 213
+E+E WE VGP+NKS++TR SF S +SDIFGG L+S V G K SA V+PF
Sbjct: 186 DKEEEDAGDWEQVGPRNKSSITRVASFPSSLISDIFGGCLRSSVHQTGAKESANVEPFFC 245
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
L LDI + V IEDAL + E L+G+ S T NA + +++ V + L K+LILHL
Sbjct: 246 LQLDI--QNVSCIEDALNHLTVKEELQGFTCSKT-NAQIDVSRR-VSFEVLPKVLILHLK 301
Query: 274 RFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSK 327
RF Y GS KL K V +PL+LV+GR+LL +P+ +G + Y+L A V HHG+ S
Sbjct: 302 RFIYSKNGSQKLQKHVDYPLELVIGRELL-SPNVKGKYTLPKKTYKLCAVVYHHGKISSG 360
Query: 328 GHYTADARYFNDQWLHFDDASVTAIGTSKVLH----DQAYVLFYKQ 369
GHYTAD + W+H DD + + +S VL Y+L+Y++
Sbjct: 361 GHYTADILHPTHGWVHTDDTKLKLVSSSFVLKPSPSKNPYLLYYRR 406
>gi|74138423|dbj|BAE38053.1| unnamed protein product [Mus musculus]
Length = 792
Score = 224 bits (570), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 221/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++++H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNRLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|281339966|gb|EFB15550.1| hypothetical protein PANDA_001250 [Ailuropoda melanoleuca]
Length = 748
Score = 223 bits (569), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 356 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 411
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 412 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 467
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 468 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 527
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 528 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 587
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 588 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 644
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 645 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 703
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 704 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 745
>gi|432104908|gb|ELK31420.1| Ubiquitin carboxyl-terminal hydrolase 10 [Myotis davidii]
Length = 777
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 385 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 440
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 441 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 496
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S SIN E
Sbjct: 497 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLPISNGPKSYSINEEEQEEPGEGSE 556
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 557 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 616
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 617 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 673
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 674 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 732
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD V I +V+ AY+L+Y++V
Sbjct: 733 VFQIGLNGWLRIDDQMVKVINQYQVVKPAADRTAYLLYYRRV 774
>gi|301755200|ref|XP_002913456.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Ailuropoda melanoleuca]
Length = 843
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 451 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 506
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 507 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 562
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 563 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNAKLSISNGPKSHSVNEDEQEEPGEGSE 622
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 623 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 682
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 683 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 739
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 740 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 798
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 799 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 840
>gi|74148888|dbj|BAE32139.1| unnamed protein product [Mus musculus]
Length = 793
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 222/403 (55%), Gaps = 49/403 (12%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456
Query: 61 LTAFVGFVSDFD----TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 114
+ +FV +++F TP + I V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVTPKPRQALGDKI-VRDIRPGAAFEPTYIYRLLTV----IKSSLS 511
Query: 115 GRPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE-------- 159
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E
Sbjct: 512 EKGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGS 571
Query: 160 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
EDEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI
Sbjct: 572 EDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQ 631
Query: 220 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-G 278
S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y
Sbjct: 632 SDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEK 688
Query: 279 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTA 332
+ G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT
Sbjct: 689 TGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTT 747
Query: 333 DARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 DVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|355727892|gb|AES09345.1| ubiquitin specific peptidase 10 [Mustela putorius furo]
Length = 788
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 217/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 396 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 451
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 452 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 507
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 508 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLPVSNGPKSHSVNEDEQEEPGEGSE 567
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 568 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 627
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 628 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 684
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 685 GGCQKLVKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 743
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 744 VFQIGLNGWLRIDDQAVKVISQYQVVKPTAERTAYLLYYRRV 785
>gi|13938036|gb|AAH07134.1| Ubiquitin specific peptidase 10 [Mus musculus]
Length = 792
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|292495057|sp|P52479.3|UBP10_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
Length = 792
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>gi|6678493|ref|NP_033488.1| ubiquitin carboxyl-terminal hydrolase 10 [Mus musculus]
gi|1255636|dbj|BAA12220.1| ubiquitin carboxyl-terminal hydrolase (UBP) [Mus musculus]
gi|74192398|dbj|BAE43006.1| unnamed protein product [Mus musculus]
gi|148679673|gb|EDL11620.1| ubiquitin specific peptidase 10, isoform CRA_b [Mus musculus]
Length = 793
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 456
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 748
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 749 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|148679672|gb|EDL11619.1| ubiquitin specific peptidase 10, isoform CRA_a [Mus musculus]
Length = 822
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 430 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 485
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 486 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 541
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 542 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 601
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 602 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 661
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 662 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 718
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 719 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 777
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 778 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 819
>gi|73957166|ref|XP_536761.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Canis lupus
familiaris]
Length = 834
Score = 222 bits (566), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 442 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 497
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 498 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 553
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSL--------AEE 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E
Sbjct: 554 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTISNGPKSHSVTEDDQEEPGEGSE 613
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 614 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 673
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 674 DRIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 730
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 731 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 789
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 790 VFQIGLNGWLRIDDQAVKVINQYQVVKPTAERTAYLLYYRRV 831
>gi|37359830|dbj|BAC97893.1| mKIAA0190 protein [Mus musculus]
Length = 818
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 426 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 481
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 482 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 537
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 538 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 597
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 598 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 657
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 658 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 714
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 715 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 773
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 774 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 815
>gi|302793823|ref|XP_002978676.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
gi|300153485|gb|EFJ20123.1| hypothetical protein SELMODRAFT_109291 [Selaginella moellendorffii]
Length = 245
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
RQEDA EFL F+++Q+H+ELLKL G + S G +A +DEWETVGPKN++A RT
Sbjct: 1 RQEDAPEFLCFLLNQIHEELLKLDGRTVSEAG-------VAVDDEWETVGPKNRTARVRT 53
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 235
S + S L+DIF GQL + VK +G+KAS V+PF +L LDI S VH++EDAL++
Sbjct: 54 CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
E + YR + + K+ +L K+LIL L+RF YG+ G+ K+ +++ F QL
Sbjct: 114 REGMGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
+G++LL + +YEL+A++ HHG+D + GHYTADA+Y D WL FDD V +
Sbjct: 172 TVGKELLSPGNEATSRYELIASIMHHGKDVTSGHYTADAKY-GDSWLRFDDRMVDKVSVD 230
Query: 356 KVLHDQAYVLFYKQV 370
VL+ QAYVLFY+++
Sbjct: 231 MVLNKQAYVLFYRKL 245
>gi|74192179|dbj|BAE34291.1| unnamed protein product [Mus musculus]
Length = 793
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQGPCTSTPM 456
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 457 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 512
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 513 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 572
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 573 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 632
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 633 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 689
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 690 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 748
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 749 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 790
>gi|338723097|ref|XP_001499923.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Equus
caballus]
Length = 813
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 532
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKSHSVNEDEQEEPDEGSE 592
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 710 GGCQKLVKNIEYPVDLEISKELL-SPGVKNKNLKCHRTYRLFAVVYHHGSSATGGHYTTD 768
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD V + +V+ AY+L+Y++V
Sbjct: 769 VFQIGLNGWLRIDDQMVKVVNQYQVVKPTADRTAYLLYYRRV 810
>gi|345487504|ref|XP_003425704.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 2
[Nasonia vitripennis]
Length = 936
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 33/389 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT--LTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L P P+ + +
Sbjct: 540 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 599
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
F +F S G+ K+ +V+DI G PF PS +LKN + S+ GR
Sbjct: 600 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 659
Query: 117 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 171
QEDA+EFLS +++ + DE+L+L + S+ + ++ E+EW+ +GPKNK
Sbjct: 660 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 717
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
++TR+ F + LSDIF GQL+S V +A+ VQPF L LDI E ++ AL
Sbjct: 718 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 775
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
+ + LEG S T + A K V ++ L ILILHL F Y G +K+ KSV F
Sbjct: 776 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 833
Query: 292 PLQLVLGRDLL-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 345
P+ L + L+ S + R+Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 834 PIDLKIDNKLMSINAKTKLSQKQRQYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 893
Query: 346 DASVTAIGTSKVLHDQ----AYVLFYKQV 370
D+S+ + + VL+ Q Y+L+Y++
Sbjct: 894 DSSLKGVSEANVLNPQPPRVPYLLYYRRC 922
>gi|156549252|ref|XP_001599382.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform 1
[Nasonia vitripennis]
Length = 933
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 205/389 (52%), Gaps = 33/389 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT--LTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L P P+ + +
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSRNPSKHSPSPLIDNMIK 596
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
F +F S G+ K+ +V+DI G PF PS +LKN + S+ GR
Sbjct: 597 FAREFTPLSEGARLARKDRAQKRNEDAVVDIQSGVPFEPSYIYTILKNTSSSGVFSVEGR 656
Query: 117 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNK 171
QEDA+EFLS +++ + DE+L+L + S+ + ++ E+EW+ +GPKNK
Sbjct: 657 --QEDAEEFLSCLLNGISDEMLELMKLANNNDQKSVECIDNSVNYSQGEEEWKVMGPKNK 714
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
++TR+ F + LSDIF GQL+S V +A+ VQPF L LDI E ++ AL
Sbjct: 715 GSITRSTDFGRTPLSDIFRGQLRSRVSRATEQATDYVQPFFTLQLDI--EKAESVRTALE 772
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
+ + LEG S T + A K V ++ L ILILHL F Y G +K+ KSV F
Sbjct: 773 ILVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYNPDGCSKIVKSVEF 830
Query: 292 PLQLVLGRDLL-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 345
P+ L + L+ S + R+Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 831 PIDLKIDNKLMSINAKTKLSQKQRQYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 890
Query: 346 DASVTAIGTSKVLHDQ----AYVLFYKQV 370
D+S+ + + VL+ Q Y+L+Y++
Sbjct: 891 DSSLKGVSEANVLNPQPPRVPYLLYYRRC 919
>gi|344292966|ref|XP_003418195.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Loxodonta
africana]
Length = 958
Score = 221 bits (563), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 566 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPVYSKAQRPCTSTPM 621
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 622 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 677
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E ++ NG + LV+ E
Sbjct: 678 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPNNEKLTVSNGPKSPLVNEEEREEQGEGSE 737
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 738 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQTSKESATLQPFFTLQLDIQS 797
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 798 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 854
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 855 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 913
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V + +V+ AY+L+Y++V
Sbjct: 914 VFQIGLNGWLRIDDQTVKVVTQYQVVRPTAERTAYLLYYRRV 955
>gi|302805713|ref|XP_002984607.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
gi|300147589|gb|EFJ14252.1| hypothetical protein SELMODRAFT_120879 [Selaginella moellendorffii]
Length = 245
Score = 221 bits (562), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/255 (45%), Positives = 166/255 (65%), Gaps = 12/255 (4%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
RQEDA EFL F+++Q+H+ELLKL G + S V +A +DEWETVGPKN++A RT
Sbjct: 1 RQEDAPEFLCFLLNQIHEELLKLDGRTVS-------EVGVAVDDEWETVGPKNRTARVRT 53
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA-- 235
S + S L+DIF GQL + VK +G+KAS V+PF +L LDI S VH++EDAL++
Sbjct: 54 CSRIWSPLTDIFCGQLYNNVKPKGSKASIQVEPFYVLTLDISSGTVHSVEDALKVCQVLT 113
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
E + YR + + K+ +L K+LIL L+RF YG+ G+ K+ +++ F QL
Sbjct: 114 REGVGRYRL--LLYFAFQDSSRGTKVVSLPKVLILQLLRFGYGNSGTRKVSRAIDFSEQL 171
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
+G++LL + +YEL+A++ HHG+D + GHYTADA+Y D WL FDD V +
Sbjct: 172 TVGKELLSPGNEATSRYELIASIMHHGKDVTSGHYTADAKY-GDSWLRFDDRMVDKVSVD 230
Query: 356 KVLHDQAYVLFYKQV 370
VL+ QAYVLFY+++
Sbjct: 231 MVLNKQAYVLFYRKL 245
>gi|410249260|gb|JAA12597.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|395748166|ref|XP_003778720.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 2
[Pongo abelii]
Length = 798
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|1136438|dbj|BAA11507.1| KIAA0190 [Homo sapiens]
Length = 813
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 421 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 476
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 477 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 532
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 533 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 592
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 593 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 652
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 653 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 709
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 710 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 768
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 769 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 810
>gi|410300628|gb|JAA28914.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|60812207|gb|AAX36202.1| ubiquitin specific protease 10 [synthetic construct]
Length = 799
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|119220605|ref|NP_005144.2| ubiquitin carboxyl-terminal hydrolase 10 isoform 2 [Homo sapiens]
gi|2501458|sp|Q14694.2|UBP10_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|189054961|dbj|BAG37945.1| unnamed protein product [Homo sapiens]
Length = 798
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|11360280|pir||T47164 hypothetical protein DKFZp762E1712.1 - human (fragment)
Length = 825
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 433 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 488
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 489 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 544
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 545 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 604
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 605 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 664
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 665 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 721
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 722 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 780
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 781 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 822
>gi|31873306|emb|CAD97644.1| hypothetical protein [Homo sapiens]
Length = 824
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 432 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 487
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 488 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 543
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 544 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 603
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 604 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 663
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 664 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 720
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 721 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 779
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 780 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 821
>gi|410213036|gb|JAA03737.1| ubiquitin specific peptidase 10 [Pan troglodytes]
gi|410331583|gb|JAA34738.1| ubiquitin specific peptidase 10 [Pan troglodytes]
Length = 803
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|297699363|ref|XP_002826757.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 isoform 1
[Pongo abelii]
Length = 802
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNPSVNEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|332246808|ref|XP_003272544.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Nomascus
leucogenys]
Length = 821
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 429 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 484
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 485 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 540
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 541 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEQGEGSE 600
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 601 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 660
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 661 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 717
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 718 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 776
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 777 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 818
>gi|12653005|gb|AAH00263.1| Ubiquitin specific peptidase 10 [Homo sapiens]
gi|61364925|gb|AAX42626.1| ubiquitin specific protease 10 [synthetic construct]
gi|123983753|gb|ABM83479.1| ubiquitin specific peptidase 10 [synthetic construct]
gi|123998177|gb|ABM86690.1| ubiquitin specific peptidase 10 [synthetic construct]
Length = 798
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|52545651|emb|CAB82392.2| hypothetical protein [Homo sapiens]
Length = 798
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|168274448|dbj|BAG09644.1| ubiquitin carboxyl-terminal hydrolase 10 [synthetic construct]
Length = 803
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 411 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 466
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 467 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 522
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 523 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 582
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 583 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 642
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 643 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 699
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 700 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 758
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 759 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 800
>gi|440918695|ref|NP_001259004.1| ubiquitin carboxyl-terminal hydrolase 10 isoform 1 [Homo sapiens]
Length = 802
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|417412642|gb|JAA52698.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Desmodus rotundus]
Length = 772
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 380 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKAQRPCTSTPM 435
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 436 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 491
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + + + E+
Sbjct: 492 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHVENEEEQEEPGEGSE 551
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 552 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 611
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 612 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 668
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 669 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 727
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 728 VFQIGLNGWLRIDDQTVKVISQYQVVKPTADRTAYLLYYRRV 769
>gi|426383094|ref|XP_004058127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Gorilla
gorilla gorilla]
Length = 804
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 412 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 467
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 468 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 523
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 524 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 583
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 584 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 643
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 644 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 700
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 701 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 759
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 760 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 801
>gi|119615877|gb|EAW95471.1| ubiquitin specific peptidase 10, isoform CRA_b [Homo sapiens]
Length = 897
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 505 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 560
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 561 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 616
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 617 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 676
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 677 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 736
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 737 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 793
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 794 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 852
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 853 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 894
>gi|194389058|dbj|BAG61546.1| unnamed protein product [Homo sapiens]
Length = 802
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|291228177|ref|XP_002734058.1| PREDICTED: ubiquitin specific peptidase 10-like [Saccoglossus
kowalevskii]
Length = 986
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 211/387 (54%), Gaps = 35/387 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSD 70
L PRGL N GN C++NATLQAL+SC P LL+ L + + G P + FV++
Sbjct: 602 LQPRGLNNVGNWCYINATLQALLSCPPMYNLLKSLPVTPLFRRGPSCTPMMDCLAHFVTE 661
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
F K+ L G PF P+ +L V +S+S + RQEDA+EFL F++
Sbjct: 662 FTPMPKAGGVKRTAQDLRPGAPFEPTYVYRLLA----LVKSSMSTKGRQEDAEEFLGFVL 717
Query: 131 DQMHDELLK-LQGE-STSINGANTALVSLAEEDEWET--------------VGPKNKSAV 174
+ +H+E+L +QG+ S +NG ++A+ + D T VGPKNKS++
Sbjct: 718 NGLHEEMLACMQGDASAKMNGPSSAVNANGPSDGEVTAVNNDDDDEEEWEQVGPKNKSSI 777
Query: 175 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
TR +F S +S+IFGGQ++S V G+K SAT+QPF L LDI S+ + +++DAL+
Sbjct: 778 TRAANFSKSPISEIFGGQMRSAVHQHGSKESATLQPFFTLQLDIQSDKIWSVKDALQSLV 837
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPL 293
+ E L Y TSS N V + + ++ L +L+LHL RF Y S G K+ K + + +
Sbjct: 838 SRETLHDY-TSSKPNKLEVETIRKISLEELPPVLVLHLKRFVYDKSGGCQKMTKKIDYSV 896
Query: 294 QLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 347
L + ++LL + + R Y+L A V HHG S GHYT D + + W+ DD+
Sbjct: 897 DLEINKELLSSNVRSKLAQTQRSYKLFAVVYHHGVKASGGHYTCDFYHPGINGWVRTDDS 956
Query: 348 SVTAIGTSKVLHDQ----AYVLFYKQV 370
+V A+ +L AY+L+Y++
Sbjct: 957 NVHAVPIPSILRPMPPKFAYLLYYRRC 983
>gi|397500409|ref|XP_003820908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan paniscus]
Length = 802
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F + P ++ K + + G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIMRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 799
>gi|380785811|gb|AFE64781.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
gi|383411655|gb|AFH29041.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
gi|384942978|gb|AFI35094.1| ubiquitin carboxyl-terminal hydrolase 10 [Macaca mulatta]
Length = 798
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 795
>gi|297284590|ref|XP_001111197.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Macaca
mulatta]
Length = 802
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 799
>gi|395836805|ref|XP_003791338.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Otolemur
garnettii]
Length = 798
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKVVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E I NG + L+ E+
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLMISNGPKSHLLDEYEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGGSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>gi|281205802|gb|EFA79991.1| ubiquitin hydrolase B [Polysphondylium pallidum PN500]
Length = 991
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/416 (34%), Positives = 216/416 (51%), Gaps = 54/416 (12%)
Query: 1 MKAINEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSPFVQLLQ------ELRTRD 52
+K +E V K + +GL+N N CF+N LQ+L+ C PFV+LL+ E+
Sbjct: 576 LKTFDEQVHKTKAITFQSKGLVNIANTCFMNVILQSLVGCQPFVKLLKNISSSSEVLDHH 635
Query: 53 IPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVL-------DIGRPFSPSMFEAVLKNF 105
+ YPTL + F +D+ + + ++ + + + I P +P F ++K+F
Sbjct: 636 SQHSKYPTLLNLIQFNNDYFSLTTTTNNQSSSNSSKFMNNNHSIPNPINPKYFSDLVKSF 695
Query: 106 TPDVPN----------SISGRPRQE-------------------DAQEFLSFIMDQMHDE 136
V SI ++ DAQEFL++ +D +H+E
Sbjct: 696 NSKVSPSPPATQPPPLSIPLSKKKSKLMVFEQQQQQLTQQSCQQDAQEFLTYFLDLIHEE 755
Query: 137 LLKLQGESTSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQS--FLPSALSDIFGGQL 193
L+ L E I G L+ + EWE VG KNK++ QS S +S IF G L
Sbjct: 756 LVSLVRE---IEGPKEEPLIPDDLDGEWEVVGQKNKTSTINDQSNTSTSSPISQIFSGTL 812
Query: 194 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 253
+S V +K S T+QPF LHLDI E ++T++DAL LF E LEGY T T +
Sbjct: 813 RSSVNKHESKESITLQPFYCLHLDIRPENIYTLDDALSLFMKEEALEGY-TCQTKKIE-I 870
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA KS+ I+ L +ILI+H RF+Y ++ KL K + FP QL L + + S + +KY
Sbjct: 871 TASKSMSIEILPRILIVHFKRFAYDTKAQ-KLDKHISFPTQLTLKSHMPIK-SDQTKKYS 928
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L + V+HHG+ S+GHYT D N+QW+ FDDAS++ + ++L +AY+L Y+Q
Sbjct: 929 LFSVVSHHGKGLSQGHYTCDVLQQNNQWVKFDDASMSDVTEQEILSREAYLLLYQQ 984
>gi|348509749|ref|XP_003442409.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
[Oreochromis niloticus]
Length = 859
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/408 (34%), Positives = 224/408 (54%), Gaps = 51/408 (12%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD---IPKAG 57
+K I++PV L PRGLIN GN C++NATLQAL++C P L++ + + P
Sbjct: 462 VKLIHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSIPLHNETQRPCTS 517
Query: 58 YPTLTAFVGFVSDFDT-PSGGSSKKKNIS---VLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + FV V++F+ P +K++ + DI G PF P+ +L + +
Sbjct: 518 TPMIDNFVRLVNEFNNMPVPSKAKQQAVGDKVTKDIRPGAPFEPTYIYKLLTL----IKS 573
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANTALVSLAEEDEWE 164
S+S + RQEDA+E+L F ++ +H+E+L L + ++ + NG + EED +
Sbjct: 574 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEEKAPTPNGPESE--PGVEEDGAD 631
Query: 165 T-----------VGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 213
VGP+NK+++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF
Sbjct: 632 KEEEGSEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFT 691
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
L LDI S+ + T+++AL A E+++GY TS T + + V ++ L +L+LHL
Sbjct: 692 LQLDIQSDKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLK 748
Query: 274 RFSY-GSQGSTKLHKSVRFPLQLVLGRDLLV----TPSAEG-RKYELVATVTHHGRDPSK 327
RF + S G KL K++ +P+ L + +DLL + +G R Y L A V HHG +
Sbjct: 749 RFVFEKSGGCQKLTKNIDYPVDLEISKDLLSSGVRSKVVKGQRTYRLFAVVYHHGNSATG 808
Query: 328 GHYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
GHYT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 809 GHYTTDVFHIGLNGWLRIDDQTVKVINQYQVVKQTAERTAYLLYYRRV 856
>gi|149642779|ref|NP_001092394.1| ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
gi|292630919|sp|A5PJS6.1|UBP10_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; AltName: Full=Ubiquitin
thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|148743862|gb|AAI42224.1| USP10 protein [Bos taurus]
gi|296478182|tpg|DAA20297.1| TPA: ubiquitin carboxyl-terminal hydrolase 10 [Bos taurus]
Length = 800
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 215/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 579
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 580 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 639
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 640 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 696
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 697 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 755
Query: 334 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 370
+ WL DD +V + + AY+L+Y++V
Sbjct: 756 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 797
>gi|403260840|ref|XP_003922859.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Saimiri
boliviensis boliviensis]
Length = 802
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV--------SLAEE 160
+ RQEDA+E+L FI++ +H+E++ L+ E +I NG V E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNEKLTISNGPKNHSVREEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 757
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 VFQIGLNGWLRIDDQTVKVINQYQVVRPTAERTAYLLYYRRV 799
>gi|426243414|ref|XP_004023443.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 10 [Ovis aries]
Length = 844
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 143/402 (35%), Positives = 219/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 452 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 507
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 508 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 563
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG + V+ E E
Sbjct: 564 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKSHSVNEDEQEEPGEGSE 623
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 624 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 683
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 684 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 740
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 741 GGCQKLIKNIEYPVDLEISKELL-SPGVKSKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 799
Query: 334 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 370
+ WL DD +V + + AY+L+Y++V
Sbjct: 800 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 841
>gi|440908740|gb|ELR58726.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Bos grunniens
mutus]
Length = 794
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 139/402 (34%), Positives = 213/402 (52%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 402 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 457
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 458 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 513
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 514 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 573
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 574 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 633
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 634 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 690
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 691 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 749
Query: 334 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 370
+ WL DD +V + + AY+L+Y++V
Sbjct: 750 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 791
>gi|390477989|ref|XP_002761263.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Callithrix
jacchus]
Length = 918
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 211/402 (52%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ + P P
Sbjct: 526 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPLYSKVQRPCTSTPM 581
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + DI G F P+ +L +S+S
Sbjct: 582 IDSFVRLMNEFTNMPVPPKPRQALGDKMARDIRPGAAFEPTYIYRLLTVNK----SSLSE 637
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E++ L+ ++ S+ E
Sbjct: 638 KGRQEDAEEYLGFILNGLHEEMVNLKKLLSPNNDKLKISNGPKNHSVREEEQEEQGEGSE 697
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 698 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 757
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 758 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 814
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 815 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 873
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V +V+ AY+L+Y++V
Sbjct: 874 VFQIGLNGWLRIDDQTVKVTNQYQVVRPTAERTAYLLYYRRV 915
>gi|157137881|ref|XP_001664058.1| hypothetical protein AaeL_AAEL003733 [Aedes aegypti]
gi|108880727|gb|EAT44952.1| AAEL003733-PA [Aedes aegypti]
Length = 1584
Score = 213 bits (543), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 212/383 (55%), Gaps = 35/383 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 68
+LPRGLIN N C++NA LQAL++C PF L++ +R+ +P A P + A V
Sbjct: 1147 ILPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHQKPFIDAMSALV 1204
Query: 69 SDFDTPSGGS------SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
+F T S +KK + P P M +L D+ + GR QEDA
Sbjct: 1205 DEFSTLQLRSKVQRDKTKKDETPEIQCDSPMEPLMIHRMLNLLRSDI-FQVEGR--QEDA 1261
Query: 123 QEFLSFIMDQMHDE---LLKLQGESTSINGANTA--LVSLAEEDEWETV-GPKNKSAVTR 176
+EFL ++++++DE L+KL + +NG + A V ++D+W+ + G +NK VTR
Sbjct: 1262 EEFLGCVLNRLNDEMIELMKLSKNESDVNGDDAANGEVHPDDQDDWKVIRGNRNKGTVTR 1321
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
T F S +SDIFGG+L+S V +G+ A+ +QPF L LDI E +++DAL L
Sbjct: 1322 TTDFGRSPMSDIFGGKLRSRVHREGDHATDNIQPFFTLQLDI--EKATSVKDALDLLVGK 1379
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
+ LEG S T + A + V ++ L ++ILHL F Y G TK+ K++ FP++L
Sbjct: 1380 DQLEGVTCSKTKQE--IAAWQQVTLEELPIVMILHLKCFDYKMDGCTKILKALEFPIELK 1437
Query: 297 LGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTA 351
+ L+ + +A+ ++Y+L A V H G++ SKGHY D + W+ +DD++V
Sbjct: 1438 IDSKLMSSKGKSYTAKQKQYKLFAVVYHDGKEASKGHYITDVFHAGYGSWIRYDDSTVKP 1497
Query: 352 IGTSKVLHDQA----YVLFYKQV 370
+ + VLH ++ Y+L+Y+++
Sbjct: 1498 VSENNVLHPKSPRVPYLLYYRRL 1520
>gi|355710448|gb|EHH31912.1| hypothetical protein EGK_13069, partial [Macaca mulatta]
Length = 792
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 218/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PR LI+ GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVTEEEQEEQGEGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQVGPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 789
>gi|432852750|ref|XP_004067366.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Oryzias
latipes]
Length = 855
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 144/407 (35%), Positives = 220/407 (54%), Gaps = 50/407 (12%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + + +
Sbjct: 459 VKLMHKPVS----LQPRGLINKGNWCYINATLQALIACPPMYHLMKSITLHNETQRTCTS 514
Query: 58 YPTLTAFVGFVSDFDTPSGGSSKKKNIS----VLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + FV V++F S K+ + DI G PF P+ +L + +
Sbjct: 515 TPMIDNFVRLVNEFSNMPVPSKTKQQAAGEKVTKDIRPGVPFEPTYIYRLLTL----IKS 570
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEED---- 161
S+S + RQEDA+E+L F ++ +H+E+L L Q E+ + NG + EED
Sbjct: 571 SLSEKGRQEDAEEYLGFTLNGLHEEMLALKKLISPQEETPTPNGPESQ--PGVEEDLPDK 628
Query: 162 -------EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 214
EWE VGP+NK ++TR F+ + ++DIFGG ++SVV Q +K SAT+QPF L
Sbjct: 629 EEEESDDEWEQVGPRNKISITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTL 688
Query: 215 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 274
LDI SE + T+++AL A E+++GY TS T + + V ++ L +L+LHL R
Sbjct: 689 QLDIQSEKIRTVQEALETLVARESVQGY-TSKTKQE--IEISRRVTLEELPPVLVLHLKR 745
Query: 275 FSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-----RKYELVATVTHHGRDPSKG 328
F + + G KL K+V +P+ L + +DLL + R Y L A V HHG + G
Sbjct: 746 FVFEKTGGCQKLTKNVDYPVDLEISKDLLSSGVRSKILKGQRTYRLFAVVYHHGNSATGG 805
Query: 329 HYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
HYT D + + WL DD +V I +V+ AY+L+Y++V
Sbjct: 806 HYTTDVFHIGLNGWLRIDDQTVKIINQYQVVKQTAERTAYLLYYRRV 852
>gi|291414098|ref|XP_002723302.1| PREDICTED: ubiquitin specific protease 10 [Oryctolagus cuniculus]
Length = 790
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/401 (36%), Positives = 217/401 (54%), Gaps = 46/401 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L P P
Sbjct: 399 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFLPLYSKAQRPCTSTPM 454
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 455 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 510
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANT-------ALVSLAEED 161
+ RQEDA+E+L FI++ +H+E+L L+ GE +I NG + E+
Sbjct: 511 KGRQEDAEEYLGFILNGLHEEMLGLKKLLAAHGEQLAIPNGPRSRPGTQEQEEEGEGSEE 570
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+
Sbjct: 571 EWEQVGPRNKTSVTRQADFVQTPITCIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSD 630
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQ 280
+ T++DAL A E+++GY T S V + V ++ L +L+LHL RF Y +
Sbjct: 631 KIRTVQDALESLVARESVQGYTTKSKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTG 687
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA 334
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 688 GCQKLIKNIDYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDV 746
Query: 335 RYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD SV I +V+ AY+L+Y++V
Sbjct: 747 FQIGLNGWLRIDDQSVRVITQYQVVKPAAERTAYLLYYRRV 787
>gi|350408371|ref|XP_003488381.1| PREDICTED: hypothetical protein LOC100746491 [Bombus impatiens]
Length = 928
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 204/389 (52%), Gaps = 34/389 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L ++ K + P + +
Sbjct: 533 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSSNKMSSTPLIDNMIK 592
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
FV +F S G+ +K+ S++DI G F P +LKN + S+ GR
Sbjct: 593 FVHEFTPLSDGARLARKDRANKRGEDSIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 652
Query: 117 PRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPKNKS 172
QEDA+EFLS +++ ++DE+L+L + N + E+EW+ +GPKNK
Sbjct: 653 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNVTNNIENNISYNNGEEEWKVMGPKNKG 710
Query: 173 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
++TR F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 711 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 768
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 292
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP
Sbjct: 769 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 826
Query: 293 LQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 345
+ L L L +P+A + + Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 827 IDLKLDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 885
Query: 346 DASVTAIGTSKVLHDQ----AYVLFYKQV 370
D+S+ + S VL Y+L+Y++
Sbjct: 886 DSSLKGVSESNVLKPTPPRVPYLLYYRRC 914
>gi|70991228|ref|XP_750463.1| ubiquitin C-terminal hydrolase [Aspergillus fumigatus Af293]
gi|66848095|gb|EAL88425.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
Af293]
gi|159130936|gb|EDP56049.1| ubiquitin C-terminal hydrolase, putative [Aspergillus fumigatus
A1163]
Length = 872
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 203/371 (54%), Gaps = 34/371 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 403 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRISHSVQSAFPMVDAMIMFMKEF 462
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 123
S++ K + D G F+P V++ + D+ R Q+DAQ
Sbjct: 463 RVIDAAPSEEQLRLRLKPNELEDYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 517
Query: 124 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEE----DEWETVGPKNKSAVTRTQ 178
EFL F++++MH+E ++ + ST+ A+ S+ +E D W VG K K+A+TR+
Sbjct: 518 EFLGFLLEEMHEECVRAAKNASTTKPAASITAESIDKEEQSGDGWLEVGHKQKAAITRSS 577
Query: 179 SFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGG+++S K GNK S T++P+ L LDI S +H I DAL+ + P
Sbjct: 578 GHITQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDIHNIVDALKGLTKP 637
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 294
E+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL
Sbjct: 638 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 695
Query: 295 LVLGRDLLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
L + R++ A G KY L+ + HHGR+ S GHYT D R + +W+ DD
Sbjct: 696 LEIPREVFAPNKRNVMMAHGGLPKYRLIGVIYHHGRNASGGHYTVDVRRQDGREWIRLDD 755
Query: 347 ASVTAIGTSKV 357
+ I + V
Sbjct: 756 TVIRRIKSEDV 766
>gi|348550306|ref|XP_003460973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Cavia
porcellus]
Length = 945
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 142/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
+++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 553 VHKPV----SLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 608
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 609 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVSK----SSLSE 664
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ---------------GESTSINGANTALVSLAEE 160
+ RQEDA+E+L F+++ +H+E+L L+ S S +G S E
Sbjct: 665 KGRQEDAEEYLGFVLNGLHEEMLSLKKLLSPGSTKLLVSNGPRSPSADGEEQEAGSEGSE 724
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
+EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 725 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 784
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 785 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 841
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 842 GGCQKLAKNIEYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 900
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD SV + +VL AY+L+Y++V
Sbjct: 901 VFQIGLNGWLRMDDQSVRVVPQHQVLRPAAERSAYLLYYRRV 942
>gi|380027295|ref|XP_003697363.1| PREDICTED: uncharacterized protein LOC100867068, partial [Apis
florea]
Length = 917
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 204/389 (52%), Gaps = 34/389 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L P + P + +
Sbjct: 522 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 581
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
FV +F S G+ +K+ +++DI G F P +LKN + S+ GR
Sbjct: 582 FVHEFTPLSDGARLARKDRANKRGEDTIVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 641
Query: 117 PRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAE-EDEWETVGPKNKS 172
QEDA+EFLS +++ ++DE+L KL +I + ++ E+EW+ +GPKNK
Sbjct: 642 --QEDAEEFLSCLLNGINDEMLELIKLVNNDQNITSNIESNINYNNGEEEWKVMGPKNKG 699
Query: 173 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
++TR F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 700 SITRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEI 757
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 292
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP
Sbjct: 758 LVGKDQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFP 815
Query: 293 LQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFD 345
+ L L L +P+A + + Y+L A H G++ +KGHY DA + W+ +D
Sbjct: 816 IDLKLDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYD 874
Query: 346 DASVTAIGTSKVLHDQ----AYVLFYKQV 370
D+S+ I + VL Y+L+Y++
Sbjct: 875 DSSLKGISENNVLKPTPPRVPYLLYYRRC 903
>gi|119496357|ref|XP_001264952.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
gi|119413114|gb|EAW23055.1| ubiquitin C-terminal hydrolase, putative [Neosartorya fischeri NRRL
181]
Length = 863
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/371 (35%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 394 LEPRGLINTGNMCYMNSVLQILVSCIPFYQFLDHVGRRASHSVQSAFPMVDAMIMFMKEF 453
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTP--DVPNSISGRPRQEDAQ 123
S++ K + + G F+P V++ + D+ R Q+DAQ
Sbjct: 454 RVIDAAPSEEQLRLRLKPNELEEYGEAFTPDFVYEVIRQLSRFRDM-----QRGHQQDAQ 508
Query: 124 EFLSFIMDQMHDELLKL-QGESTSINGANTALVSLAEE----DEWETVGPKNKSAVTRTQ 178
EFL F++++MH+E ++ + ST+ A+T S+ +E D W VG K K+AVTR+
Sbjct: 509 EFLGFLLEEMHEECVRAAKNASTTKPAASTTAESIDKEEQSGDGWLEVGHKQKAAVTRSS 568
Query: 179 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGG+++S K GNK S T++P+ L LDI S ++ I DAL+ + P
Sbjct: 569 GHIAQESPITRIFGGKIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKP 628
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 294
E+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL
Sbjct: 629 ESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKIGYPLD 686
Query: 295 LVLGRDLLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
L + R++ A G KY L+ + HHGR+ S GHYT D R + +W+ DD
Sbjct: 687 LEIPREVFAPNKRNIMMAHGGLPKYRLIGVIYHHGRNASGGHYTVDVRRQDGREWIRLDD 746
Query: 347 ASVTAIGTSKV 357
+ I + V
Sbjct: 747 TVIRRIKSEDV 757
>gi|384490748|gb|EIE81970.1| hypothetical protein RO3G_06675 [Rhizopus delemar RA 99-880]
Length = 562
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/391 (35%), Positives = 201/391 (51%), Gaps = 56/391 (14%)
Query: 6 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLT 62
EP + L PRGLIN+ N CF+N LQ L C PF L++ + T+ +I K+ P L
Sbjct: 196 EPTFNAPLLQPRGLINNVNTCFMNVILQPLSHCPPFYNLIKTISTKVAHNI-KSKTPLLD 254
Query: 63 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVL---KNFTPDVPNSISGRPRQ 119
+ + F+++F T ++ S+ G PF P L K F + R RQ
Sbjct: 255 SIIEFINEFQT-------ERLDSLEQYGEPFVPEYVYNALRGQKKFD-------TLRGRQ 300
Query: 120 EDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEEDEWETVGPKNKSAV 174
ED++EFL F++D +H+E++ + E + NG N DEW VG KNK++
Sbjct: 301 EDSEEFLCFLLDGLHEEMINVLKERETKRLEEDNGKN---------DEWLEVGAKNKTSN 351
Query: 175 TRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
RT F S +S IFGG+++SV++ G K S ++P+ L LDI E VH++EDA+ +
Sbjct: 352 LRTTGFDESPISKIFGGKVRSVLRCPGAKDSINLEPYQSLPLDIQPENVHSVEDAIANMT 411
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 293
PE + Y TS G V A K V + L +LILH+ RF + + G KL K V +
Sbjct: 412 LPEIMHDY-TSPKGLK--VEATKQVYFEKLPSVLILHMKRFVFDNVGGVQKLSKRVSYGS 468
Query: 294 QLVLGRDLL--VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 351
QLV+ + + V AE Y+L V HHG GHYT D + N +WLH DD ++T
Sbjct: 469 QLVIDPEWMVHVMRQAEPVTYKLFGIVYHHGSSAGGGHYTCDIKRRNGEWLHIDDTTITP 528
Query: 352 IG-------------TSKVLH--DQAYVLFY 367
+ TS+ +H AY+LFY
Sbjct: 529 VSEKDVLVTEEENTRTSEKIHAGQTAYILFY 559
>gi|431838529|gb|ELK00461.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Pteropus alecto]
Length = 797
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 405 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 460
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 461 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLAV----IKSSLSE 516
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 517 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPKNHSVNEEEQEEPGEGSE 576
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
+EWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 577 EEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 636
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 637 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 693
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 694 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKSFKCHRTYRLFAVVYHHGSSATGGHYTTD 752
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD V I +V+ AY+L+Y++V
Sbjct: 753 VFQIGLNGWLRIDDQMVKVINQYQVVKPTADRTAYLLYYRRV 794
>gi|91092940|ref|XP_972197.1| PREDICTED: similar to CG32479 CG32479-PA [Tribolium castaneum]
gi|270004786|gb|EFA01234.1| ubiquitin-specific protease [Tribolium castaneum]
Length = 633
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 198/378 (52%), Gaps = 29/378 (7%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLL---QELRTRDIPKAGYPTLTAFVGFVSD 70
L PRGLIN N C++N+ LQAL++C P LL E T + P + FV +
Sbjct: 256 LQPRGLINKSNYCYINSILQALLACPPVYNLLVGLSEQNTTAQKEKATPIIDGMCRFVKE 315
Query: 71 FD-TPSG--------GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
F P+G + KK+ ++D PF PS +L D+ + GR QED
Sbjct: 316 FQHLPAGLRVNRRNDKNQKKEQGLMIDYDLPFEPSWIYKMLNGVRSDL-FLVEGR--QED 372
Query: 122 AQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
A+EFL +++ ++DE+L KL +IN + + EW+ +GPKNK ++TR
Sbjct: 373 AEEFLGCLLNGLNDEMLELMKLVKSDLTINKFESKTSDQDTDKEWQVMGPKNKGSITRQM 432
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
F+ + +S+IFGG LKS + G+ ++ +QPF L L+I E V T+ +AL
Sbjct: 433 EFVKTPISNIFGGFLKSRIHRTGDHSTYNIQPFFTLQLNI--EKVKTVREALEALVTKNQ 490
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
LEG T V A + V ++ L ILILHL F + G TK+ K++ FP+ L +
Sbjct: 491 LEGVTNEKTNEE--VEAWQQVTLEELPVILILHLKCFDFKLDGCTKIVKALEFPIDLKID 548
Query: 299 RDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTS 355
LL + S + ++Y+L A V H G++ +KGHY DA + W+ +DDASV ++
Sbjct: 549 SKLLSSKPMSPKEKQYKLFAVVYHDGKEATKGHYITDAFHVGYSSWIRYDDASVKSVQED 608
Query: 356 KVLHDQA----YVLFYKQ 369
VL Q Y+LFY++
Sbjct: 609 YVLKPQGTRVPYLLFYRR 626
>gi|351706494|gb|EHB09413.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Heterocephalus
glaber]
Length = 787
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 142/392 (36%), Positives = 214/392 (54%), Gaps = 43/392 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 70
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 401 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 460
Query: 71 F---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 461 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 516
Query: 126 LSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLA--------EEDEWETVGPKN 170
L FI++ +H+E+L L+ E ++ NG + L A E+EWE VGP+N
Sbjct: 517 LGFILNGLHEEMLSLKRLLSPDSEKLTVSNGPRSPLPKDAAQQEQGEGSEEEWEQVGPRN 576
Query: 171 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 577 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 636
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 289
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 637 ESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLAKNI 693
Query: 290 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 694 DYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 752
Query: 343 HFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
DD V I +VL AY+L+Y++V
Sbjct: 753 RIDDQVVKVIQQYQVLKPAAERTAYLLYYRRV 784
>gi|332846499|ref|XP_511147.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Pan
troglodytes]
Length = 780
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 206/396 (52%), Gaps = 57/396 (14%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 410 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 465
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 466 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 521
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 522 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSSEKLTISNGPKNHSVNEEEQEEQGEGSE 581
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 582 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 641
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 642 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 698
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 338
G KL K++ +P+ L E+ V HHG + GHYT D
Sbjct: 699 GGCQKLIKNIEYPVDL-----------------EISKVVYHHGNSATGGHYTTDVFQIGL 741
Query: 339 DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 742 NGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 777
>gi|322802987|gb|EFZ23111.1| hypothetical protein SINV_02090 [Solenopsis invicta]
Length = 933
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 211/396 (53%), Gaps = 45/396 (11%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 63
K LLPRGL N N C++N+ LQAL++C PF LL L +PK + P +
Sbjct: 537 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 593
Query: 64 FVGFVSDFD--TPSGGSSKKKNI------SVLDI--GRPFSPSMFEAVLKNFTPDVPNSI 113
V FV +F T + +K + +V+DI G F PS +LKN + S+
Sbjct: 594 MVKFVREFSPLTEAARMPRKDRVHKRGEDTVMDIYSGIAFEPSYVYTMLKNASAAGAFSV 653
Query: 114 SGRPRQEDAQEFLSFIMDQMHDELLKL----QGESTSINGANTALVSLAEEDEWETVGPK 169
GR QEDA+EFLS +++ ++DE+L+L + +I+ A + + +E+EW+ +GPK
Sbjct: 654 EGR--QEDAEEFLSCLLNGINDEMLELIKLVSNDQNAISNAKN-VSNEHDEEEWQVMGPK 710
Query: 170 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 229
NK AVTR F + LSDIF GQL+S V G + + VQPF L LD+ + ++ A
Sbjct: 711 NKGAVTRCTEFERTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVRHA 768
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKL 285
L + + +EG S T + A K V ++ L ILILHL F Y S G +K+
Sbjct: 769 LEILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKFSNGCSKI 826
Query: 286 HKSVRFPLQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN- 338
K+V FP+ L + L +P+ + ++Y+L A H G++ +KGHY DA +
Sbjct: 827 LKTVEFPIDLKIDGKFL-SPNTVKKLGPKQKQYKLFAVTYHDGKEATKGHYFTDAFHVGY 885
Query: 339 DQWLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 370
W+ +DD++V ++ S VL + Y+L+Y++
Sbjct: 886 GSWVRYDDSTVKSVPESNVLRPTSPRVPYLLYYRRC 921
>gi|390352547|ref|XP_794239.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-B-like
[Strongylocentrotus purpuratus]
Length = 823
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 214/397 (53%), Gaps = 52/397 (13%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSD 70
+L PRGLIN+ N C++N+ LQAL+SC PF +++ + + + + P L A F+ +
Sbjct: 429 NLQPRGLINTANWCYINSILQALLSCPPFYHIMRNMPLNNGVRKSSSTPMLDAMYKFLKE 488
Query: 71 FDTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN-SISGR-PRQEDAQEFL 126
F G S + S LDI G F P++ +L V N S+S + RQEDA+EFL
Sbjct: 489 FQEMKGLSKR----SPLDIRTGTCFEPTVIYQMLS-----VANTSLSVKHGRQEDAEEFL 539
Query: 127 SFIMDQMHDELLKL---------QGESTSINGANTALVSLA-------------EEDEWE 164
S +++ +HDE+ L Q + NG ++ V++A ++DEWE
Sbjct: 540 SCLLNGLHDEMTSLIQLYNGEDVQANDSKQNGPASSSVAVANGDVGNGHPEEGSDDDEWE 599
Query: 165 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 224
VGP+NK+++TR F S LS IFGG ++S + G+K SAT+QPF L LDI S+ +
Sbjct: 600 QVGPRNKTSITRKAQFSSSPLSKIFGGIMRSALHQHGSKESATLQPFFSLQLDIQSQDIW 659
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGST 283
+++ AL E++ G+ ++ T V A + + ++ L +LILHL RF Y S G
Sbjct: 660 SVQHALDNLGNRESVHGFMSNKTKKE--VEAFRRITLEELPPVLILHLKRFLYDKSGGCQ 717
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF 337
KL K + + +++ + +D L++P+ + R Y+L A V H G++ S GHY D +
Sbjct: 718 KLMKKIEYAMEIEINKD-LISPNTKSRIGLVQRTYKLFAVVYHTGKEASGGHYITDVYHV 776
Query: 338 N-DQWLHFDDASVTAIGTSKVLHDQA----YVLFYKQ 369
WL DD V + ++V+ Y+LFY++
Sbjct: 777 GTSAWLRCDDGIVKPVKAAQVIKPLTTCIPYLLFYRR 813
>gi|452837008|gb|EME38951.1| hypothetical protein DOTSEDRAFT_75600 [Dothistroma septosporum
NZE10]
Length = 897
Score = 203 bits (517), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 198/372 (53%), Gaps = 38/372 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF L ++R R + K+ P + A + FV +F
Sbjct: 433 LEPRGLVNTGNMCYMNSILQVLVFCVPFYSFLDQVRQRTVHSLKSDTPLVDAMIMFVREF 492
Query: 72 D----TPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQ 123
P+ + + K + G P +P V++ +G R Q+DA+
Sbjct: 493 KILARAPTADTLRPVLKQEQLEQYGEPCTPEYVYEVIQRLP-----RFAGMRRGHQQDAE 547
Query: 124 EFLSFIMDQMHDELLK-LQGESTS------INGANTALVSLAEEDEWETVGPKNKSAVTR 176
EFL F+++ +HDE +K +QG++ + I+ + + A +D W VGPK K+A TR
Sbjct: 548 EFLGFLLEGLHDECVKVMQGQTDTHRQQIGISCPGSVASATAADDGWLEVGPKQKAAETR 607
Query: 177 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T Q P+ ++ IFGG L+S ++ G K S T++P+ L LDI ++ V+ I DAL+ +
Sbjct: 608 TAGQQDAPTPITKIFGGHLRSELRVPGKKDSVTLEPYKPLQLDIGAQNVNNIIDALKGLT 667
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPL 293
PE EG GN TAKK V I+TL +L+LHL RF Y S G T K+ K + +PL
Sbjct: 668 IPEAFEG-DFGGRGN----TAKKQVFIETLPPVLVLHLKRFQYDSSGGTQKIWKKIGYPL 722
Query: 294 QLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFD 345
L + +++ G +Y L A V HHG+ + GHYT D R + +W+ D
Sbjct: 723 DLEIPKEVFAPAKRAGMGATKSLPRYRLTAVVYHHGKSAAGGHYTVDVLRQDSREWVRMD 782
Query: 346 DASVTAIGTSKV 357
D + I V
Sbjct: 783 DTIIRRIRPEDV 794
>gi|321457135|gb|EFX68228.1| hypothetical protein DAPPUDRAFT_301522 [Daphnia pulex]
Length = 380
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 126/382 (32%), Positives = 202/382 (52%), Gaps = 34/382 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVGFVSD 70
LLPRGLIN N C++NATLQAL++CSPFV L++ L R ++ P + + + F+
Sbjct: 6 LLPRGLINKSNWCYINATLQALIACSPFVHLVKSLERFTGRKHEESTTPIMDSVIEFIDQ 65
Query: 71 FDT------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
F+ S+KK+ G F PS +L + + RQEDA+E
Sbjct: 66 FEVIPVRIGKERASAKKEEPH---FGTSFEPSSIYKMLSKIRSE---TFKVEGRQEDAEE 119
Query: 125 FLSFIMDQMHDELLKLQGESTSING-----ANTALVSLAEEDEWETVGPKNKSAVTRTQS 179
FLS +++ +HDE++ + + G A +++++W+ +GPKN+ VT +
Sbjct: 120 FLSCLLNGLHDEMIDIVKATNLPVGKTPVQAGEVKPCTSDDEDWQVIGPKNRGCVTHITT 179
Query: 180 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
+ + +S++F GQ++S + G +++AT+QPF L LDI +E V+++ DAL + E L
Sbjct: 180 YSKTPISNLFLGQMRSALHYAGAQSTATLQPFFSLQLDIQNEKVNSVRDALACLVSKEPL 239
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLG 298
GY +G V A + ++ L ILILHL F Y S G KL K V F L L
Sbjct: 240 TGYICPKSGQE--VEASRQTTLEELPPILILHLKCFVYDKSGGCQKLMKRVDFSSDLELS 297
Query: 299 RDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVTA 351
+D L +P+ + R+Y+L A V H G++ +KGHY + + WL FDD+ V
Sbjct: 298 KDFL-SPNQKSKLKEKQRQYKLFAVVYHDGKEATKGHYVTEVHHSGTGSWLRFDDSIVRV 356
Query: 352 IGTSKVLHD---QAYVLFYKQV 370
+ T ++ Y+L Y+++
Sbjct: 357 VETQPFKYNLPRMPYLLLYRKL 378
>gi|391871138|gb|EIT80303.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
Length = 878
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 201/376 (53%), Gaps = 42/376 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 412 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 471
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S++ K + G F P V++ P + G Q+DAQEF
Sbjct: 472 RVIDAAHSEEQLSLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 528
Query: 126 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 174
L F++++MH+E + ST +GA SL+EE D W VG K K AV
Sbjct: 529 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 584
Query: 175 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
TR+ + S + IFGGQ++S K GNK S T++P+ L LDI S ++ I DAL+
Sbjct: 585 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 644
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 290
+ PE+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K V
Sbjct: 645 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 702
Query: 291 FPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QW 341
+PL L + R++L P+ A+G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 703 YPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 761
Query: 342 LHFDDASVTAIGTSKV 357
+ DD + + + V
Sbjct: 762 IRLDDTVIRRVRSEDV 777
>gi|317137707|ref|XP_001727905.2| ubiquitin hydrolase [Aspergillus oryzae RIB40]
Length = 870
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/376 (35%), Positives = 201/376 (53%), Gaps = 42/376 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 404 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 463
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S++ K + G F P V++ P + G Q+DAQEF
Sbjct: 464 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 520
Query: 126 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE---------DEWETVGPKNKSAV 174
L F++++MH+E + ST +GA SL+EE D W VG K K AV
Sbjct: 521 LGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWLEVGHKQKPAV 576
Query: 175 TRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
TR+ + S + IFGGQ++S K GNK S T++P+ L LDI S ++ I DAL+
Sbjct: 577 TRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPEINNIVDALKG 636
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVR 290
+ PE+++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K V
Sbjct: 637 LTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTRGTQKIWKKVG 694
Query: 291 FPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QW 341
+PL L + R++L P+ A+G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 695 YPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 753
Query: 342 LHFDDASVTAIGTSKV 357
+ DD + + + V
Sbjct: 754 IRLDDTVIRRVRSEDV 769
>gi|307204000|gb|EFN82904.1| Ubiquitin carboxyl-terminal hydrolase 10 [Harpegnathos saltator]
Length = 825
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 123/380 (32%), Positives = 197/380 (51%), Gaps = 29/380 (7%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFV 68
L+PRGL N N C++N+ LQALMSCS F L + + + + P++ + + F+
Sbjct: 441 LVPRGLTNRNNYCYINSILQALMSCSLFYNLFKAMPHPKNCNKQNKHSTIPSINSLIRFI 500
Query: 69 SDFDT-------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
+F+ P + K++ +++ G PS +LK + + GR QED
Sbjct: 501 REFNPLPENARLPRKARANKRDDIIIENGVALEPSYMYTMLKYTSSAGVFPVEGR--QED 558
Query: 122 AQEFLSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
A+EFLS +++ ++DE+L L + N N A + +E+EW +GPKNK ++TR+
Sbjct: 559 AEEFLSCLLNAINDEMLDLMKLANNEHNDINNAEKNDGKEEEWRVIGPKNKGSITRSTEL 618
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ LSDIF G+ +S V G + S +QPF L LDI E ++++AL + + + LE
Sbjct: 619 ERTPLSDIFRGKSRSRVSRPGEQPSDNIQPFFTLQLDI--EKADSVKEALDILVSKDRLE 676
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 300
G S T + A K + ++ L +LILHL F Y G +KL KSV FP+ L +
Sbjct: 677 GMTCSKTKKQ--IEAWKQMTLEELPAVLILHLKWFVYKYNGCSKLIKSVEFPIDLKIDNK 734
Query: 301 LLVTPSAEG-----RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGT 354
L +A+ ++Y+L A H G++ +KGHY D + W+ +DD S AI
Sbjct: 735 FLSASTAKKLSPKQKQYKLFAVTYHDGKEATKGHYVTDCFHVGYGTWVRYDDTSAKAISE 794
Query: 355 SKVLHD----QAYVLFYKQV 370
VL Y+L+Y++
Sbjct: 795 GTVLKPVPPRVPYLLYYRRC 814
>gi|296422375|ref|XP_002840736.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636959|emb|CAZ84927.1| unnamed protein product [Tuber melanosporum]
Length = 709
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 197/365 (53%), Gaps = 35/365 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+CF+NA LQ L+ C PF L + K P + A + F+ +F
Sbjct: 305 LEPRGLLNTGNMCFMNAVLQMLVFCGPFYYFLDRVAKEAAHSFKNETPLIDAMIMFMREF 364
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQEFLSFI 129
+ ++K++++ L G PF+P V++N S + R Q+DA+EFL F+
Sbjct: 365 HA-TPMTAKQEDLDAL--GEPFAPEFLYEVIRNT-----KSFAHMRRGHQQDAEEFLGFL 416
Query: 130 MDQMHDELLKLQGES-----TSINGANTALVSLAEEDE--WETVGPKNKSAVTRTQSFLP 182
+D +H+E +K+ +S +SI+G + SL + DE W VG K K+A TRT
Sbjct: 417 LDGLHEEAVKMMMKSDGNGPSSISGDS----SLDDTDESGWMEVGHKQKTATTRTTEISE 472
Query: 183 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
S ++ IFGG+L+SV K S T++P+ L LDI + V ++ DAL+ + PE ++G
Sbjct: 473 SPITKIFGGKLRSVFHVPALKPSVTLEPYTPLQLDIQAPEVRSVVDALKHLTTPEKIQGD 532
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDL 301
S G V AKK V I+TL +LILHL RF Y + G T K+ K + +PL L + +
Sbjct: 533 FKSPKGPN--VAAKKQVFIETLPPVLILHLKRFQYDNTGGTQKIWKKIGYPLVLQIPSEA 590
Query: 302 L-----VTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTS 355
+ PSA KY L+ V HHG+ S GHYT D R W+ DD + + +
Sbjct: 591 MSQAQRAGPSA---KYRLIGVVYHHGKSASGGHYTVDVLRQDAKNWIRLDDTVIRRVRSE 647
Query: 356 KVLHD 360
+V D
Sbjct: 648 EVAVD 652
>gi|440640781|gb|ELR10700.1| hypothetical protein GMDG_04961 [Geomyces destructans 20631-21]
Length = 883
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/373 (34%), Positives = 203/373 (54%), Gaps = 35/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF +LL ++ R K+ P + A + F+ +F
Sbjct: 420 LEPRGLVNTGNMCYMNSVLQVLVFCVPFYELLDQVGKRAAHSFKSDTPLIDAMIMFMREF 479
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
S + K+ + G F+P V++ P S R Q+D +E
Sbjct: 480 PIIDSAVSVEKLRMRLKDNELEKYGDAFTPDFVYEVIRTL----PRFASMRRGHQQDTEE 535
Query: 125 FLSFIMDQMHDELLKLQGESTSINGA----NTALVSLAEE------DEWETVGPKNKSAV 174
FL F+++ +HDE +++ ++S++G+ ++ VS A + W VGPK K+A+
Sbjct: 536 FLGFLLEGLHDECVQVMQSTSSVDGSPIVPSSPAVSQAGSVFGEGANGWLEVGPKQKAAI 595
Query: 175 TRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
TR+ + L S ++ IFGG L+SV++ G K S T++P+ L LDI+ +VH I DAL+
Sbjct: 596 TRSSGTRLDSPITKIFGGTLRSVLRVPGLKDSVTMEPYQPLQLDIHLPSVHNIIDALKGL 655
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFP 292
+ PE + G S G+ VTA K V I+TL +LILHL RF Y + G T K+ K V +P
Sbjct: 656 TKPETITGDFKSPRGSN--VTATKQVSIETLPPMLILHLKRFQYDNSGGTQKIWKKVGYP 713
Query: 293 LQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
L+L + +++ G +Y L A V HHG++ S GHYT D R + +W+
Sbjct: 714 LELEIPKEVFARQKQGGILNHGGLPRYRLTAVVYHHGKNASGGHYTVDVRRQDGREWVRL 773
Query: 345 DDASVTAIGTSKV 357
DD + + + V
Sbjct: 774 DDTVIRRVKSEDV 786
>gi|425774704|gb|EKV13005.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
gi|425780801|gb|EKV18799.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
Length = 708
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/362 (35%), Positives = 194/362 (53%), Gaps = 37/362 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC+PF Q L L R + P + + F+ +F
Sbjct: 255 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDGMIMFMKEF 314
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+ + + P+ E ++F PD V + PR Q+DA
Sbjct: 315 RVIDSATSEDQ------LRLRLKPNELEQYGESFVPDFVYEMVRQLPRFRDMRRGHQQDA 368
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
QEFL F++++MH+E + + + + ++++ D W VG K K+AVT+ L
Sbjct: 369 QEFLGFLLEEMHEECARAESHTVAKESGDSSV------DGWLEVGHKQKAAVTQLSGSLA 422
Query: 183 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S ++ IFGG+L+S K GNK S T++P+ L LDI S VH I DALR + PE+++
Sbjct: 423 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALRGMTKPESIQ 482
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 298
G SS G +TA K + I+TL +LILHL RF Y S G+T K+ K V +PL L L
Sbjct: 483 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 540
Query: 299 RDLL-------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVT 350
R++ + KY L+ + HHG++ S GHYT D R +W+ DD ++
Sbjct: 541 REVFPAHRRNAMASQGGPPKYRLMGVIYHHGKNASGGHYTVDVRRQEGLEWIRMDDTAIR 600
Query: 351 AI 352
+
Sbjct: 601 RV 602
>gi|358368948|dbj|GAA85564.1| ubiquitin C-terminal hydrolase [Aspergillus kawachii IFO 4308]
Length = 854
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 129/369 (34%), Positives = 200/369 (54%), Gaps = 31/369 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+++ K + D G F P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 126 LSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE--DEWETVGPKNKSAVTRTQSF- 180
L F++++MH+E + +T+ AN EE D W VG K K+AVTR+
Sbjct: 513 LGFLLEEMHEECNRAAKDAPATTSASANPEAEVANEESGDGWLEVGHKQKAAVTRSSGHI 572
Query: 181 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
L S ++ IFGG+++S + GNK S T++P+ L LDI + ++ I DAL+ + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 297
+G SS G VTA K + I+T+ +LILHL RF Y S +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690
Query: 298 GRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
R++ P+ A+G KY LV + HHG++ S GHYT D R + +W+ DD
Sbjct: 691 PREVF-PPNKRNIMMAQGGLPKYRLVGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTL 749
Query: 349 VTAIGTSKV 357
+ + + V
Sbjct: 750 IRRVRSEDV 758
>gi|430812378|emb|CCJ30186.1| unnamed protein product [Pneumocystis jirovecii]
Length = 522
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 135/392 (34%), Positives = 204/392 (52%), Gaps = 38/392 (9%)
Query: 7 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAF 64
P K L PRGLIN+GN+CF+N LQ L C PF LL E+ + + + + A
Sbjct: 135 PEKKHYVLQPRGLINTGNVCFMNVILQVLAFCPPFYNLLDEISKKMVNSSVNDVSLINAL 194
Query: 65 VGFVSDFDTPS----GGSSKKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQ 119
+ F+ +F + G+S+ K ++ D G PF P ++ A+ N D R Q
Sbjct: 195 ISFIREFSVITQPVLNGTSQAKKQNIEDFGEPFIPEYVYIAMRGNKLFDS----MRRGHQ 250
Query: 120 EDAQEFLSFIMDQMHDELL-KLQGEST--------SINGANTALVSLAEED----EWETV 166
EDA+EFL ++D +H+E L K++ + +N N S +D EW V
Sbjct: 251 EDAEEFLGLLLDALHEEFLDKMKSDPVISSICTLNRMNCMNFTDFSDHSQDKNDNEWVEV 310
Query: 167 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 226
GPK K+++ R+ + S L+ IF G +S+++ G K S T++P+ L LDI + +I
Sbjct: 311 GPKQKTSIMRSANVSESPLTPIFTGNFRSILRVSGMKPSITLEPYRSLQLDIEPFHIDSI 370
Query: 227 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 285
E+AL+ + PE L G SS G + A K V I+TL ++LILHL RF Y + G T K
Sbjct: 371 EEALQNITQPEVLNGDWHSSLGEK--LKATKQVFIETLPQVLILHLKRFVYDNVGGTQKS 428
Query: 286 HKSVRFPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWL 342
+K+V +PLQ + ++ +P + K+ L A V HHG S GHYT D R W+
Sbjct: 429 YKNVHYPLQFEIPPTVM-SPHRRFEKNMKFVLFAVVYHHGMSASGGHYTVDLRQDTQSWI 487
Query: 343 HFDDASVTAI-------GTSKVLHDQAYVLFY 367
DD ++ I +S++ + AY+LFY
Sbjct: 488 RVDDTHISYILPEHVIPSSSELPNRFAYLLFY 519
>gi|345564452|gb|EGX47415.1| hypothetical protein AOL_s00083g508 [Arthrobotrys oligospora ATCC
24927]
Length = 849
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 136/375 (36%), Positives = 203/375 (54%), Gaps = 33/375 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFVSD 70
+ PRGLIN+GN+CF+N+ LQAL+ C PF L + +R + K P + A + F+ +
Sbjct: 437 MEPRGLINTGNMCFMNSILQALLFCGPFFLFLDAV-SRKVAHNFKNETPLIDAMIMFMRE 495
Query: 71 FDTPSGGSSKKKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQE 124
F + GS + + D+ G PF P ++EAV LK F S R Q+DA+E
Sbjct: 496 FRRVTPGSLLSSDSPISDMTLSGDPFVPEYVYEAVKGLKRF------SSMRRGHQQDAEE 549
Query: 125 FLSFIMDQMHDELLKL--QGESTSINGA----NTALVSLAEEDEWETVGPKNKSAVTRTQ 178
FL+F +D +H+E + GE + A +TA S ++ W VG K K+ +TR
Sbjct: 550 FLNFFLDVLHEECVAAIKSGEGSKQGSAAHPNHTATPSQEDDSGWLEVGHKQKTTITRNI 609
Query: 179 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGGQ+++ ++ G ++S +P+ L LDI + +H+I DALR S P
Sbjct: 610 GHISGISPVTKIFGGQMRNELRISGQRSSVMREPYQSLQLDIQNSNIHSIVDALRQISIP 669
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 295
E L+G S A +A K I +L +LILHL RF Y + G T K+ KS+ +PL L
Sbjct: 670 EQLQGGDFKSARGAS-ASATKQAFIDSLPPVLILHLKRFQYNNTGGTQKIWKSIGYPLDL 728
Query: 296 VLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 351
+ + L +P SA+ +Y+L + V HHG+ + GHYT D + D W+ DD V
Sbjct: 729 EIPSEAL-SPTRRTSAQPARYKLTSVVYHHGKSATNGHYTVDVKR-QDGWIRIDDTVVKR 786
Query: 352 I-GTSKVLHDQAYVL 365
I G V+HD Y L
Sbjct: 787 ITGNDVVVHDGLYNL 801
>gi|405971143|gb|EKC35997.1| Ubiquitin carboxyl-terminal hydrolase 10 [Crassostrea gigas]
Length = 895
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 209/386 (54%), Gaps = 39/386 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLTAFVGFVSD 70
L PRGL+N GN C++NATLQAL+SC PF ++++ + G P + + V FV +
Sbjct: 517 LQPRGLMNRGNWCYINATLQALVSCPPFYNMMKKFPVNAPARKGKSSTPIMDSLVQFVHE 576
Query: 71 FDTPSGGSSK-KKNISVLDIGRPFSP----SMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F + + + +K ++ L G F P +M + + +N + + +QEDA+EF
Sbjct: 577 FHPCARPTERGRKTLTELVPGAAFEPVNVYNMLQVIEENKSFKLG-------KQEDAEEF 629
Query: 126 LSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE------DEWETVGPKNKSAVTR 176
LS+I+D +H+E L+K + ++NG T VSL E D WE VGPK KS +TR
Sbjct: 630 LSYILDGLHEEMTTLIKFANGTPTVNGLTTDDVSLDESSEDVDPDSWEQVGPKKKSVLTR 689
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+F + L++IF G +S + +K SAT+QPF L LDI S+ VH++++A+ +
Sbjct: 690 RANFEKTPLAEIFVGYTRSALYKANSKDSATLQPFFTLQLDIQSDKVHSVKEAMDGLVSR 749
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 295
E++ G+ S T V + + ++ L +LILHL F Y GS KL K+ + + L
Sbjct: 750 ESVSGFTCSKT--KAEVDVVRHLTLEELPPVLILHLKFFVYDKDGGSQKLLKNFEYGIDL 807
Query: 296 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 348
+ +DLL +P+ R Y+L A V HHG+ + GHYT + + W+ DD+
Sbjct: 808 EITKDLL-SPNVRSKYQLHQRSYKLFAVVYHHGKKATGGHYTTAVFHPAINNWIIIDDSL 866
Query: 349 VTAIGTSKVLHD----QAYVLFYKQV 370
V + VL + Y+L+Y+++
Sbjct: 867 VKHVSVGTVLKNIPGRVPYLLYYRRI 892
>gi|67538032|ref|XP_662790.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
gi|40743177|gb|EAA62367.1| hypothetical protein AN5186.2 [Aspergillus nidulans FGSC A4]
gi|259484643|tpe|CBF81041.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
AFUA_1G07160) [Aspergillus nidulans FGSC A4]
Length = 840
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 196/365 (53%), Gaps = 30/365 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 385 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGKRASHSFHSDFPMVDALIMFMKEF 444
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+++ K + G F P V++ P + G Q+DAQEF
Sbjct: 445 RVIDAARNEEQLRMRLKANELEQYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 501
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEE-DEWETVGPKNKSAVTRTQSFLPS- 183
L F++++MH+E + +TS N + + +E D W VG K K AVTR+ + S
Sbjct: 502 LGFLLEEMHEECAR----ATSANSSTEPASTDSENGDGWLEVGHKQKPAVTRSSGHIASE 557
Query: 184 -ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
++ IFGG+++S + GNKAS T++P+ L LDI + +H I DAL+ + PE+++G
Sbjct: 558 SPITKIFGGKIRSEFRVPGNKASVTLEPYQPLQLDIGAPEIHNIVDALKGLTKPESIQGD 617
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 300
SS G VTA K V I++L +LILHL RF Y S G+ K+ K + +PL L + R+
Sbjct: 618 FNSSRGPN--VTATKQVFIESLPPVLILHLKRFQYDSVTHGTQKIWKKIGYPLDLEIPRE 675
Query: 301 LLVTPS-----AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAI 352
+ A+G KY L + HHG++ S GHYT D R + +W+ DD + I
Sbjct: 676 VFPPHRRNVMMAQGGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTVIRRI 735
Query: 353 GTSKV 357
+ V
Sbjct: 736 KSEDV 740
>gi|388578790|gb|EIM19126.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 444
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/392 (35%), Positives = 204/392 (52%), Gaps = 45/392 (11%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVG 66
KS + L RGLIN GNLCF NA Q+L+ C PF QL +L R++P + P L A +
Sbjct: 68 KSPQLLELRGLINQGNLCFANAIFQSLVFCQPFYQLFIQL-GRELPFSFNKTPLLDATIM 126
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP--RQEDAQE 124
F+++F + L G PF+P+ +K + N S +QEDA+E
Sbjct: 127 FLNEFRVLDDDDIQ------LQTGEPFTPTSIYDAMKTY-----NRFSQIQLGQQEDAEE 175
Query: 125 FLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAE----EDEWETVGPKNKSAVT 175
FL F +D +H+ELL + T+++ L+ + +D W VG KNK+ T
Sbjct: 176 FLGFFLDTLHEELLSISPRLKPRTGTTLHEWFDGLLPTDQPAQADDGWLEVGHKNKTLST 235
Query: 176 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
++ + S L+ +FGG+ +SV+K G K S T++PF L LDI + +HTIEDAL +
Sbjct: 236 KSTNTQESPLTKMFGGKFRSVLKTPGQKDSITLEPFQPLQLDIQPDNIHTIEDALINLAQ 295
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQ 294
PE + G +SS G V A+K V I T ILI+HL RF Y S G K +K + +
Sbjct: 296 PETIHGVHSSS--KQGPVDARKQVTIDTCPPILIIHLKRFLYDSIGGVLKSNKKIGYKST 353
Query: 295 LVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVT 350
L + + +++PS AEG Y L A V HHG+ GHYT D R + QW+H DD +
Sbjct: 354 LNIPNE-IISPSKRPAEGLNYRLFAVVYHHGQSSGSGHYTIDVLRQNHKQWVHIDDIVMD 412
Query: 351 AIGTSKVL--HDQ----------AYVLFYKQV 370
+ V+ H+ AY+L Y ++
Sbjct: 413 LLDEKDVVITHNSKQNNNYDDKVAYLLLYSKI 444
>gi|145238800|ref|XP_001392047.1| ubiquitin hydrolase [Aspergillus niger CBS 513.88]
gi|134076546|emb|CAK39738.1| unnamed protein product [Aspergillus niger]
gi|350635972|gb|EHA24333.1| ubiquitin-specific protease [Aspergillus niger ATCC 1015]
Length = 854
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 201/369 (54%), Gaps = 31/369 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R + +P + A + F+ +F
Sbjct: 396 LQPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFNSDFPMIDALIMFMREF 455
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+++ K + D G F P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHTEEQLKLRLKPNELEDYGEAFVPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 126 LSFIMDQMHDELLKLQGES-TSINGANTALVSLAEE---DEWETVGPKNKSAVTRTQSF- 180
L F++++MH+E + ++ + + A +A E D W VG K K+AVTR+
Sbjct: 513 LGFLLEEMHEECNRAAKDAPVTASAAPNPEAEVANEEPGDGWLEVGHKQKAAVTRSSGHI 572
Query: 181 -LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
L S ++ IFGG+++S + GNK S T++P+ L LDI + ++ I DAL+ + PE++
Sbjct: 573 ALESPITKIFGGKIRSEFRVPGNKTSVTLEPYQPLQLDIGAPEINNIVDALKGLTKPESI 632
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVL 297
+G SS G VTA K + I+T+ +LILHL RF Y S +G+ K+ K V +PL L +
Sbjct: 633 QGDFNSSRGPN--VTATKQIFIETMPPVLILHLKRFQYDSVTRGTQKIWKKVGYPLDLEI 690
Query: 298 GRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
R++ P+ A+G KY LV + HHG++ S GHYT D R + +W+ DD
Sbjct: 691 PREVF-PPNKRNIMMAQGGLPKYRLVGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDTL 749
Query: 349 VTAIGTSKV 357
+ + + V
Sbjct: 750 IRRVRSEDV 758
>gi|121702365|ref|XP_001269447.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
gi|119397590|gb|EAW08021.1| ubiquitin C-terminal hydrolase, putative [Aspergillus clavatus NRRL
1]
Length = 870
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 199/370 (53%), Gaps = 32/370 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L P+GL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 400 LEPKGLVNTGNMCYMNSVLQILVSCVPFYQFLDHVGKRATHSVQSEFPVVDAMIMFMREF 459
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S++ K + + G F P V++ P + G Q+DAQEF
Sbjct: 460 RVIDAAHSEEQLRLRLKPNELEEYGEAFIPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 516
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSAVTRTQSF 180
L F++++MH+E + +++ + A + DE W VG K K+A+TR+
Sbjct: 517 LGFLLEEMHEECARAAKDASLADSATSVSAEPPSVDEQSGDGWLEVGHKQKAAITRSSGH 576
Query: 181 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG ++S K GNK S T++P+ L LDI S ++ I DAL+ + PE+
Sbjct: 577 IAQESPITKIFGGNIRSEFKVPGNKTSVTLEPYQPLQLDIGSPDINNIVDALKGLTKPES 636
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 296
++G SS G VTA K + I+ L +LILHL RF Y S +G+ K+ K + +PL L
Sbjct: 637 IQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSATRGTQKIWKKIGYPLDLE 694
Query: 297 LGRDLLVTPS------AEG--RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
+ R++ P+ A+G KY L+ + HHG++ S GHYT D R + +W+ DD
Sbjct: 695 IPREVF-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRLDDT 753
Query: 348 SVTAIGTSKV 357
+ I + V
Sbjct: 754 VIRRIKSEDV 763
>gi|449684800|ref|XP_002158653.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-A-like, partial
[Hydra magnipapillata]
Length = 382
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 124/377 (32%), Positives = 195/377 (51%), Gaps = 22/377 (5%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVG 66
S L RGLIN GN C++N TLQAL++ SP + L+T D+ P + +
Sbjct: 10 SCHHLQLRGLINRGNWCYINTTLQALLAISPISHFYKSLKTFLNTDVSYTSTPLTDSMIA 69
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
F ++F++ + S KK + G F P VL S+S + RQEDA+EFL
Sbjct: 70 FFNEFESINPKISLKKQSEDIKTGASFEPRCIYNVLTTMKA----SLSEKGRQEDAEEFL 125
Query: 127 SFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SFLP 182
S++++ +HDEL+ KL + T N L + ++ W VG K K + S
Sbjct: 126 SYLLNGIHDELVALNKLLSKKTPNGNDNADLDNENDDSSWSQVGTKKKDLAKKVNPSSDS 185
Query: 183 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ + IFGG ++S V+ G K S T+QPF L LDI + + +E A+ + E L+G+
Sbjct: 186 TIIKQIFGGMIRSSVQQSGVKESTTLQPFFTLQLDIQGDEIWCLEKAIESYFVKEILQGF 245
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDL 301
S T V A + + I+ L +LI HL F Y + GS K++K++ P+ L + +D+
Sbjct: 246 TCSKTNTE--VEASRKLSIEELPLVLIFHLKYFVYDRTGGSQKIYKAIDIPVDLEIPKDV 303
Query: 302 L---VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKV 357
L + S R+Y L A + HHG+ + GHYTA + + W++FDD + + ++V
Sbjct: 304 LSPSLKVSLNERQYRLYAVIHHHGKHAAGGHYTASVHHGSPFGWVNFDDNIIKTLNVNQV 363
Query: 358 LHDQA----YVLFYKQV 370
L Q Y+LFY++
Sbjct: 364 LRKQQGSVPYLLFYERC 380
>gi|83770933|dbj|BAE61066.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 966
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/396 (34%), Positives = 202/396 (51%), Gaps = 61/396 (15%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ +P + A + F+ +F
Sbjct: 479 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDHIGRRASHSFQSDFPMIDALIMFMKEF 538
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFT------------------- 106
S++ K + G F P V++
Sbjct: 539 RVIDAAHSEEQLRLRLKPNELEQYGDAFIPEFVYQVIRQLPRFRDMRVRSSLLIQPIYAQ 598
Query: 107 -PDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALVSLAEE--- 160
+ PN G Q+DAQEFL F++++MH+E + ST +GA SL+EE
Sbjct: 599 LTNYPNIQRGH--QQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSA 652
Query: 161 ------DEWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFL 212
D W VG K K AVTR+ + S + IFGGQ++S K GNK S T++P+
Sbjct: 653 ADDESGDGWLEVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQ 712
Query: 213 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 272
L LDI S ++ I DAL+ + PE+++G SS G VTA K + I+ L +LILHL
Sbjct: 713 PLQLDIGSPEINNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHL 770
Query: 273 MRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPS------AEG--RKYELVATVTHHG 322
RF Y S +G+ K+ K V +PL L + R++L P+ A+G KY L+ + HHG
Sbjct: 771 KRFQYDSVTRGTQKIWKKVGYPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHG 829
Query: 323 RDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKV 357
++ S GHYT D R + +W+ DD + + + V
Sbjct: 830 KNASGGHYTVDVRRQDGREWIRLDDTVIRRVRSEDV 865
>gi|401883681|gb|EJT47877.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
2479]
Length = 1047
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/412 (34%), Positives = 211/412 (51%), Gaps = 58/412 (14%)
Query: 7 PVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTA 63
P + ++PRGLIN+GN+CF N LQ L C+PF +L +EL R D+ + P L A
Sbjct: 645 PAGAPAPIVPRGLINTGNMCFANTILQVLRYCTPFTELFEELGKRLKADLARR-TPLLEA 703
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKNFTPDVPNSISGRPR 118
V F+ +F G S+ N + G+ F P ++++A+ +N D R
Sbjct: 704 MVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKENKRFDT----MRRGY 757
Query: 119 QEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVSLA--------EED 161
QEDA+E+L F ++ +H+ELL L +S + NG + + ++D
Sbjct: 758 QEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTIDRPVSPTGRRNDDD 817
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
+W VG K K+ V RT S++S IFGG L+SV+ G+K S T++P+ L LDI +
Sbjct: 818 DWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVTLEPYQPLQLDIQAN 877
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
VHT+ DALR + PE + G S+ NA V A K V ++TL +LILHL RF Y Q
Sbjct: 878 EVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPVLILHLKRFVYDPQE 935
Query: 282 ST--KLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYT-ADAR 335
K K V + +L + + +++P + +G KY L V HHG + GHYT AR
Sbjct: 936 QNVVKRSKPVAYSTELTIPAE-IISPAKRTPQGIKYRLFGVVYHHGHSATGGHYTVCVAR 994
Query: 336 YFNDQWLHFDDASVTAIGTSKVLHDQ-----------------AYVLFYKQV 370
WLHFDD +V + T V+ + AY+LFY++V
Sbjct: 995 PDGTGWLHFDDETVQPVPTEDVIVSEEEERDGRAGTVAGREKCAYLLFYQRV 1046
>gi|255948676|ref|XP_002565105.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592122|emb|CAP98446.1| Pc22g11580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 833
Score = 197 bits (501), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 194/362 (53%), Gaps = 37/362 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC+PF Q L L R + P + A + F+ +F
Sbjct: 380 LEPRGLVNTGNMCYMNSVLQILVSCTPFYQFLDHLGRRAAHTFHSDLPLIDAMIMFMKEF 439
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+++ L P+ E +F P+ V + PR Q+DA
Sbjct: 440 RVIDAATSEEQLRLRL------KPNELEQYGDSFVPEFVYEMVRQLPRFRDMRRGHQQDA 493
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
QEFL F++++MH+E + + + + G +++ D W VG K K+AVT+ L
Sbjct: 494 QEFLGFLLEEMHEECARAETHTATKEGGDSSA------DGWLEVGHKQKAAVTQLSGSLA 547
Query: 183 --SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S ++ IFGG+L+S K GNK S T++P+ L LDI S VH I DAL+ + PE+++
Sbjct: 548 AESPVTRIFGGKLRSEFKVPGNKTSVTLEPYQPLQLDIGSHDVHNILDALKGMTKPESIQ 607
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-QGST-KLHKSVRFPLQLVLG 298
G SS G +TA K + I+TL +LILHL RF Y S G+T K+ K V +PL L L
Sbjct: 608 GDFNSSRGPN--ITATKQIFIETLPPVLILHLKRFQYDSVTGATQKIWKKVGYPLDLELP 665
Query: 299 RDLL-------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVT 350
R++ + KY L+ + HHG++ S GHYT D R +W+ DD +
Sbjct: 666 REVFPAHRRNAMASQGGPPKYRLMGVIYHHGKNASGGHYTVDVRRQEGLEWIRMDDTVIR 725
Query: 351 AI 352
+
Sbjct: 726 RV 727
>gi|332017167|gb|EGI57966.1| Ubiquitin carboxyl-terminal hydrolase 10 [Acromyrmex echinatior]
Length = 917
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 206/394 (52%), Gaps = 45/394 (11%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 63
K LLPRGL N N C++N+ LQAL++C PF LL L +PK + P +
Sbjct: 523 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLTAL---PLPKNRGRNSATPLIDN 579
Query: 64 FVGFVSDFD-------TPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSIS 114
FV +F P K+ +V+DI G F P+ +LK+ + + S
Sbjct: 580 MGKFVREFTPLTEAARMPRKDRVKRGEDTVMDIYSGVAFEPAYVYTMLKHTS-----AFS 634
Query: 115 GRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNK 171
RQEDA+EFLS +++ ++DE+L KL + G + + +E+EW+ +GPKNK
Sbjct: 635 VEGRQEDAEEFLSCLLNGINDEMLDVTKLINNDQNAIGNAKNISNDHDEEEWQVMGPKNK 694
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
AVTR F + +SDIF GQL+S V G + + VQPF L LD+ + +++ AL
Sbjct: 695 GAVTRCTEFERTPISDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKHALE 752
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHK 287
+ + +EG S T + A K V ++ L ILILHL F Y S G +K+ K
Sbjct: 753 ILVGKDQVEGLTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILK 810
Query: 288 SVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQ 340
++ FP+ L + L +P+ A+ ++Y+L A H G++ +KGHY DA +
Sbjct: 811 TMEFPIDLKIDGKFL-SPNTAKKLGAKQKQYKLFAVTYHDGKEATKGHYFTDAFHVGYGC 869
Query: 341 WLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 370
W+ +DD++V ++ + VL + Y+L+Y++
Sbjct: 870 WVRYDDSTVKSVTENNVLRPTSPRVPYLLYYRRC 903
>gi|398388325|ref|XP_003847624.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
gi|339467497|gb|EGP82600.1| hypothetical protein MYCGRDRAFT_77923 [Zymoseptoria tritici IPO323]
Length = 498
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/364 (35%), Positives = 196/364 (53%), Gaps = 37/364 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++R R + K+ P + A + F+ +F
Sbjct: 32 LEPRGLVNTGNMCYMNSILQVLVFCAPFYSFLDQVRQRTVHSMKSDTPLVDAMIMFMREF 91
Query: 72 ----DTPSGGSSKK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
D S + +K K + G P +P V++ +P S R Q+DA+E
Sbjct: 92 KVLADAESADALRKTLKQDQLEVYGDPVTPEYVYEVIRK----LPRFASMRRGHQQDAEE 147
Query: 125 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT--QS 179
FL F+++ +HDE +++ Q + NG + +AE W VGPK K++VTRT Q
Sbjct: 148 FLGFLLEGLHDECVHVMQGQMDEPKENGVTSPDTVIAE--GWLEVGPKQKASVTRTAGQQ 205
Query: 180 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ + E L
Sbjct: 206 DAPSPVTKIFGGHLRSELRVPGQKDSVTLEPYQPLQLDIGAPHVNNIIDALKGITRTETL 265
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
T G G TAKK V I TL +LILHL RF Y + G+ K+ K V +PL+L +
Sbjct: 266 ----TGDFGGKG-STAKKQVFIDTLPPVLILHLKRFQYDNSQTGTQKIWKRVGYPLELEI 320
Query: 298 GRDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDAS 348
+D+ P+ G +Y L V HHG+ + GHYT D R + +W+ DD
Sbjct: 321 PKDVF-PPAKRGGLAVKGGLPRYRLTGVVYHHGKSAAGGHYTVDVLRQDSREWVRMDDTV 379
Query: 349 VTAI 352
+ I
Sbjct: 380 IRRI 383
>gi|427796467|gb|JAA63685.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Rhipicephalus pulchellus]
Length = 827
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/379 (34%), Positives = 198/379 (52%), Gaps = 37/379 (9%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKA-GYPTLTAFVGFVSDFDT 73
PRGL N N C++NA LQAL++C F LL L +P + P + + F+ +
Sbjct: 455 PRGLENGKNWCYINANLQALLACPAFYNLLYSLPLVPGLPGSNATPFMECLIYFLQTYAV 514
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P + KK+ V + + + P F +L PD + +QEDA+EFLSF+++ +
Sbjct: 515 PMVRETGKKDELV--VAKAYDPEHFRDLLMKIKPDC-----KKGKQEDAEEFLSFMLNGL 567
Query: 134 HDELLK-LQGESTSING---------ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
HDE++ ++ S +NG A +E W+TV +N+ VTR+ +LPS
Sbjct: 568 HDEMVSSMRSVSNGLNGQCNGEAQPPVEHADDDDDDEGAWKTVIHRNRHQVTRSAEYLPS 627
Query: 184 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 243
L DIFGG+++S V A G + SA++QPF L LDI + V T+EDAL +A E ++ Y
Sbjct: 628 PLMDIFGGEMRSSVTADG-ETSASLQPFFTLQLDI-QDGVKTVEDALLHLAAEEKVQNYH 685
Query: 244 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLL 302
+S + V A + ++ L ++LILHL RF Y G KL ++ P QL L R L+
Sbjct: 686 SSKSNKE--VDALRRTTLEKLPQVLILHLKRFVYDKNGGCKKLMNAIHIPHQLQLDRKLV 743
Query: 303 VTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSK 356
PS+E R Y L A ++H G KGHY DA + + W DD +V+ I
Sbjct: 744 --PSSERWSNKQRCYILFAVLSHSGERTDKGHYVTDAFHPAGRTWFRCDDDNVSPIAQGD 801
Query: 357 VLHDQ-----AYVLFYKQV 370
+L + Y+LFY++
Sbjct: 802 LLRFENSSLVPYLLFYRRA 820
>gi|328786677|ref|XP_001122220.2| PREDICTED: hypothetical protein LOC726488 [Apis mellifera]
Length = 878
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/385 (34%), Positives = 192/385 (49%), Gaps = 55/385 (14%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L P + P + +
Sbjct: 512 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKNPSKMSSTPLIDNMIK 571
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
FV +F S G+ +K+ V+DI G F P +LKN + S+ GR
Sbjct: 572 FVHEFTPLSDGARLARKDRANKRGEDIVVDIQSGVAFEPFYVYTMLKNTSAAGVFSVEGR 631
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
QEDA+EFLS +++ ++DE+L E +GPKNK ++TR
Sbjct: 632 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 664
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 665 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 722
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
+ LEG S T + A K V ++ L ILILHL F Y G +K+ KSV FP+ L
Sbjct: 723 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDGCSKIVKSVEFPIDLK 780
Query: 297 LGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASV 349
L L +P+A + + Y+L A H G++ +KGHY DA + W+ +DD+S+
Sbjct: 781 LDSKFL-SPNAIKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYDDSSL 839
Query: 350 TAIGTSKVLHDQ----AYVLFYKQV 370
I S VL Y+L+Y++
Sbjct: 840 KGISESNVLKPTPPRVPYLLYYRRC 864
>gi|440470881|gb|ELQ39920.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae Y34]
gi|440485747|gb|ELQ65671.1| ubiquitin carboxyl-terminal hydrolase 10 [Magnaporthe oryzae P131]
Length = 1024
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGLIN+GN+C++N+ LQ L+ C+PF L++ + + P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 123
S + K+ + G PF+P ++EA+ K +P S R Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 174
EFL F ++ +HDE + + + +TA S A+ +++W VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741
Query: 175 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
TR+ S + S ++ IFGG+L+S ++ G K S T++P+ L LDI + V I DALR
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 290
+ PE+L G S G V+A K V I++L +LILHL RF + ++ G+ K+ K V
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859
Query: 291 FPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+PL+L + R++L KY+L+A V HHG++ S GHYTAD R + +W+ DD
Sbjct: 860 YPLELEIPREVLSRAKRTAGSLPKYKLIAAVYHHGKNASGGHYTADVRRQDGTEWIRLDD 919
Query: 347 ASVTAIGTSKV 357
+ + + V
Sbjct: 920 TVIRRVRSEDV 930
>gi|389628378|ref|XP_003711842.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
gi|351644174|gb|EHA52035.1| ubiquitin C-terminal hydrolase [Magnaporthe oryzae 70-15]
Length = 1024
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 204/371 (54%), Gaps = 34/371 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGLIN+GN+C++N+ LQ L+ C+PF L++ + + P + A + F+ DF
Sbjct: 567 IEPRGLINTGNMCYMNSVLQVLLFCTPFYDFLEQAGKKVTHSFNSETPLIDAMIEFMRDF 626
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 123
S + K+ + G PF+P ++EA+ K +P S R Q+DA+
Sbjct: 627 KIIDSAISVDQLRRRLKSEELEQYGEPFTPEFIYEAIRK-----LPRFSSMRRGHQQDAE 681
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE---------EDEWETVGPKNKSAV 174
EFL F ++ +HDE + + + +TA S A+ +++W VGP+ ++A+
Sbjct: 682 EFLGFFLESLHDECSHVMRAAGQQSITSTAPQSSAQTPTTSAPSVDNDWLEVGPRQRAAI 741
Query: 175 TRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
TR+ S + S ++ IFGG+L+S ++ G K S T++P+ L LDI + V I DALR
Sbjct: 742 TRSSGHSDMSSPVTKIFGGELRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRNIVDALRH 801
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVR 290
+ PE+L G S G V+A K V I++L +LILHL RF + ++ G+ K+ K V
Sbjct: 802 LTNPESLRGDFNSPRGKD--VSATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKVG 859
Query: 291 FPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+PL+L + R++L KY+L+A V HHG++ S GHYTAD R + +W+ DD
Sbjct: 860 YPLELEIPREVLSRAKRTAGSLPKYKLIAAVYHHGKNASGGHYTADVRRQDGTEWIRLDD 919
Query: 347 ASVTAIGTSKV 357
+ + + V
Sbjct: 920 TVIRRVRSEDV 930
>gi|402077713|gb|EJT73062.1| ubiquitin C-terminal hydrolase [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1010
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 136/379 (35%), Positives = 203/379 (53%), Gaps = 42/379 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ L+ C PF L++ + + P + A + F+ DF
Sbjct: 543 LEPRGLINTGNMCYMNSVLQVLIFCIPFYDFLEQAGKKVAHSFNSETPLIDAMIEFLRDF 602
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 123
S + KN + G PF P ++EA+ K +P S R Q+DA+
Sbjct: 603 KIIDSAVSVDQLRRRLKNEELEQYGEPFIPEFVYEAIKK-----LPRFSSMRRGHQQDAE 657
Query: 124 EFLSFIMDQMHDE---LLKLQGESTSINGAN-------TALVSLAEEDE------WETVG 167
EFL F+++ +HDE +L+ S++++ A TA VS A D W VG
Sbjct: 658 EFLGFLLESLHDECAHVLRAVPPSSNVSTAPNSSLPTPTASVSSANLDSGDASNVWLEVG 717
Query: 168 PKNKSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
PK +SA+TR+ S S ++ IFGGQL+S ++ G K S T++P+ L LDI + V
Sbjct: 718 PKQRSAITRSSGHSDTSSPITKIFGGQLRSELRVPGLKDSVTLEPYQPLQLDIGAPQVRN 777
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GST 283
I DALR + PE+L G S G VTA K V I++L +LILHL RF + ++ G+
Sbjct: 778 IVDALRHLTNPESLRGDFGSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTV 835
Query: 284 KLHKSVRFPLQLVLGRDLLV----TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN- 338
K+ K + +PL+L + R+++ S KY L+A V HHG++ S GHYT D R +
Sbjct: 836 KIWKKIGYPLELEIPREVVSRAKRNSSTGMPKYRLIAAVYHHGKNASGGHYTVDVRRQDG 895
Query: 339 DQWLHFDDASVTAIGTSKV 357
+W+ DD + I V
Sbjct: 896 SEWVRLDDTVIRRIRAEDV 914
>gi|355757014|gb|EHH60622.1| Ubiquitin carboxyl-terminal hydrolase 10, partial [Macaca
fascicularis]
Length = 792
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 136/402 (33%), Positives = 213/402 (52%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PR LI+ GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRELISKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEEDE------ 162
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E++E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPRNHSVTEEEQEEQGEESE 571
Query: 163 --WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
WE P+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 572 DEWEQADPRNKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A +++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARASVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + G T D
Sbjct: 689 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGQSTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 PFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 789
>gi|367026027|ref|XP_003662298.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
42464]
gi|347009566|gb|AEO57053.1| hypothetical protein MYCTH_2302790 [Myceliophthora thermophila ATCC
42464]
Length = 950
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 199/374 (53%), Gaps = 41/374 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF+ L ++ + K+ P L A + F+ +F
Sbjct: 489 LEPRGLVNTGNMCYMNSVLQVLIFCIPFLDFLDQVSKKAAHSFKSETPLLDAMIMFMREF 548
Query: 72 ---DTPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
D+ + +K + + G PF+P ++ +P S R Q+DAQE
Sbjct: 549 KVIDSATSAEQLRKRLKSEEYEKFGEPFTPEFVYDAIRT----LPRFASMRRGHQQDAQE 604
Query: 125 FLSFIMDQMHDELLKLQ---GESTSINGANTALVSLAEE---------DEWETVGPKNKS 172
FL F+++ +HDE +++ ST+ N++L S D+W VGP+ +S
Sbjct: 605 FLGFLLEGLHDECVQVMRTVPASTASTAPNSSLPSPTSSRANDASEGGDDWLEVGPRQRS 664
Query: 173 AVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
AVTR+ S S ++ IFGGQL+S ++ GNK S T++P+ L LDI S V I DAL
Sbjct: 665 AVTRSSGHSNTLSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEVRNIIDAL 724
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHK 287
+ + PE L G S G V A K V I+++ +LILHL RF + G G+ K+ K
Sbjct: 725 KGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWK 782
Query: 288 SVRFPLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND 339
V +PL+ R++L + ++ +Y L+A V HHG++ S GHYT D R +
Sbjct: 783 KVGYPLEFEFPREVLSRQTRNSILAENSGTPRYRLIAVVYHHGKNASGGHYTVDVRRQDG 842
Query: 340 -QWLHFDDASVTAI 352
+W+ DD + +
Sbjct: 843 REWIRIDDTVIRRV 856
>gi|195129379|ref|XP_002009133.1| GI11427 [Drosophila mojavensis]
gi|193920742|gb|EDW19609.1| GI11427 [Drosophila mojavensis]
Length = 849
Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 203/389 (52%), Gaps = 48/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 429 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 483
Query: 67 FVSDFDT-PSGGSSKKKNISVLDIGR------------PFSPSMFEAVLKNFTPDVPNSI 113
++S+F + PSG + N + G+ F P+ + K + +
Sbjct: 484 YMSNFSSLPSGTRLRLNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEHV 540
Query: 114 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETV-GP 168
G RQEDA+EFL +++++++DE+L++ N + E D+W+ +
Sbjct: 541 EG--RQEDAEEFLGYVLNKLNDEMLEIIKLIAKPNAQQNGVEQEQEIEDGGDDWQMICNN 598
Query: 169 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 228
+NK ++TR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E ++++
Sbjct: 599 RNKGSITRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVKE 656
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 288
AL + + LEG S + V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 657 ALEILVGRDQLEGVTGSKSKQE--VVAWQQMTVEKLPIVLILHLKYFDYRSDGCTKILKK 714
Query: 289 VRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL +
Sbjct: 715 VEFPVELKIDAKILGSKKTSQKQRTYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLRY 773
Query: 345 DDASVTAIGTSKVLHDQA----YVLFYKQ 369
DD+SV IG +VL Y+L+Y++
Sbjct: 774 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 802
>gi|342882079|gb|EGU82833.1| hypothetical protein FOXB_06636 [Fusarium oxysporum Fo5176]
Length = 930
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 194/369 (52%), Gaps = 37/369 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ LM C PF L ++ R + K+ P + A + F+ +F
Sbjct: 486 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLSQISKRAVHSFKSDTPLIDAMIMFMHEF 545
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 123
T + + KN + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 546 KTIKSAAGIESLRTTLKNEELERYGDPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 600
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT---QSF 180
EFL F++ + DE + ST + A ++W VG K K+AV+R+ SF
Sbjct: 601 EFLGFLLQSLDDECTAVLKNSTLPDQERRASSGSGAGEDWLEVGRKQKAAVSRSSGPNSF 660
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
P +S IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+
Sbjct: 661 SP--ISRIFGGSLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRPERLQ 718
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 298
G S G VTA K V I TL +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 719 GDFNSPRGKD--VTATKQVFIDTLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 776
Query: 299 RDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
R+ L S + R KY L++ V HHG++ S GHYT D R +W+ DD
Sbjct: 777 REAL---SRQKRQTYGDDGMPKYRLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTV 833
Query: 349 VTAIGTSKV 357
+ + + V
Sbjct: 834 IRRVRSEDV 842
>gi|242014362|ref|XP_002427860.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512329|gb|EEB15122.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1009
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 199/387 (51%), Gaps = 37/387 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT--AFVGFVSDF 71
L PRGL N N C++NA LQ+L++C PF LL+ L K TL A V + ++F
Sbjct: 623 LQPRGLTNRSNWCYVNAVLQSLIACPPFYNLLKALPVTPNKKGNKQTLIVDALVEYANEF 682
Query: 72 D-----------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
S + + NI + G F PS +L ++ GR QE
Sbjct: 683 SPIPANARIGKREKSARNKDENNIVEIVTGPAFEPSGIYKILDKVRGGSSFNVEGR--QE 740
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSIN-------GANTALVSLAEED--EWETVGPKNK 171
DA+EFLS +++ ++DE+ +L + IN A+ +L ++D EW +GPKNK
Sbjct: 741 DAEEFLSCLLNGLNDEMFELM-KMVGINRLDLANGDAHDSLGGNIDDDDSEWNVMGPKNK 799
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
S++TR + +SDIF GQ +S V+ G +++ TVQPF L LDI E ++++DAL
Sbjct: 800 SSITRRAVCGKTPVSDIFRGQFRSRVQRAGEQSTDTVQPFFTLQLDI--EKANSVKDALE 857
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
LF + LEG S T V A ++ L +LILHL + Y S +K+ K+ F
Sbjct: 858 LFMGKDPLEGVTCSKTHQE--VEAWTQTTLEDLPLVLILHLKCYDYKSDACSKIIKNFDF 915
Query: 292 PLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDA 347
+ L + LL + + R Y+LVA V H G++ SKGHY DA + WL +DD
Sbjct: 916 QVDLRIDAKLLSNRNKYTGKERNYKLVAVVYHDGKEASKGHYVTDAYHVGYGCWLRYDDV 975
Query: 348 SVTAIGTSKVLHDQA----YVLFYKQV 370
V ++ S VL +A Y+L+Y++
Sbjct: 976 IVRSVPESHVLKPRAPRVPYLLYYRRA 1002
>gi|115388639|ref|XP_001211825.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195909|gb|EAU37609.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 858
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 196/376 (52%), Gaps = 45/376 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF Q L + R ++ P + A V F+ +F
Sbjct: 396 LEPRGLVNTGNMCYMNSVLQILVSCVPFYQFLDLVGRRASHSFQSEVPLIDAMVMFMKEF 455
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S++ K + G F+P V++ P + G Q+DAQEF
Sbjct: 456 RIIDAAHSEEQLRLRLKPNELEQYGEAFTPEFVYQVIRQL-PRFRDMRRGH--QQDAQEF 512
Query: 126 LSFIMDQMHDELLKL------------QGESTSINGANTALVSLAEEDEWETVGPKNKSA 173
L F++++MH+E ++ G+ T+ +G + D W VG K K+A
Sbjct: 513 LGFLLEEMHEECARVAKDAPVKTDDAAPGDETAADGESG--------DGWLEVGHKQKAA 564
Query: 174 VTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
VTR+ L S ++ IFGG+++S + GNK S T +P+ L LDI S VH I DAL+
Sbjct: 565 VTRSSGHIALESPITRIFGGKIRSEFRVPGNKTSVTYEPYQPLQLDIGSPDVHNIVDALK 624
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSV 289
+ PE+++G S G VTA K + I+ L +LILHL RF Y S +G+ K+ K +
Sbjct: 625 GLTKPESIQGDFNSPRGPN--VTATKQLFIEVLPPVLILHLKRFQYDSVTRGTQKIWKKI 682
Query: 290 RFPLQLVLGRDLL------VTPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFND-QW 341
+PL L L R++ + S G KY L+ + HHG++ S GHYT D R + +W
Sbjct: 683 GYPLDLELPREVFPPNKRNIMMSQGGLPKYRLIGVIYHHGKNASGGHYTVDVRRQDGREW 742
Query: 342 LHFDDASVTAIGTSKV 357
+ DD + + + V
Sbjct: 743 IRLDDTVIRRVRSEDV 758
>gi|449302518|gb|EMC98527.1| hypothetical protein BAUCODRAFT_66730 [Baudoinia compniacensis UAMH
10762]
Length = 516
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 195/365 (53%), Gaps = 36/365 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++++ LQ L+ C+PF L ++R R + K+ P + A + F+ DF
Sbjct: 49 LEPRGLVNTGNMCYMSSVLQILLFCTPFYHFLDQVRQRTVHSMKSDTPLVDAMIMFMRDF 108
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPN-SISGRPRQEDAQ 123
+ S + K + G P +P ++EAV D+P R Q+DA+
Sbjct: 109 KVLASAESVEALRKTLKQEQLEQFGEPVTPEYVYEAVR-----DLPRFQNMRRGHQQDAE 163
Query: 124 EFLSFIMDQMHDELLKLQGESTS--INGANTALV--SLAEEDEWETVGPKNKSAVTRTQS 179
EFL FI++ +HDE + + ST G + + S + D W VGPK K++VTRT
Sbjct: 164 EFLGFILECLHDECVTVMRSSTESQTEGVTSPSITASPSSADGWLEVGPKQKASVTRTAG 223
Query: 180 F--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ + E
Sbjct: 224 HEDAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGAAHVNNIVDALKGLTRTE 283
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 295
+L G G G + AKK V I T+ +L+LHL RF Y + G+ K+ K + +PL+L
Sbjct: 284 SLTG----EFGGRGNI-AKKQVFIDTVPPVLVLHLKRFQYENNLTGTQKIWKKIGYPLEL 338
Query: 296 VLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDA 347
+ +++ + G KY L++ V HHG+ + GHYT D R +W+ DD
Sbjct: 339 EIPKEVFPSSRRAGLAVKGGLPKYRLISVVYHHGKSAAGGHYTVDVLRQDQREWVRMDDT 398
Query: 348 SVTAI 352
+ I
Sbjct: 399 IIRRI 403
>gi|452987313|gb|EME87069.1| hypothetical protein MYCFIDRAFT_49312 [Pseudocercospora fijiensis
CIRAD86]
Length = 890
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 199/371 (53%), Gaps = 38/371 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF L ++R R + K+G P + A + F+ +F
Sbjct: 423 LEPRGLVNTGNMCYMNSILQVLIFCVPFYNFLDQVRQRTVHSMKSGTPLVDAMIMFMREF 482
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
+ S K + G P +P V++ +P S R Q+DA+E
Sbjct: 483 KVLASAESVDALRALLKQEQLEQYGDPVTPDYVYEVIRK----LPRFASMRRGHQQDAEE 538
Query: 125 FLSFIMDQMHDELLK-LQGE-----STSINGANTALVSLAEEDEWETVGPKNKSAVTRT- 177
FL F+++ +HDE ++ +QG+ S++ +TA+ S D W VGPK K++VTRT
Sbjct: 539 FLGFLLEGLHDECVQVMQGQPDEQPKQSVSLPDTAM-SPGSADGWLEVGPKQKASVTRTA 597
Query: 178 -QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
Q PS ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I DAL+ +
Sbjct: 598 GQQDAPSPITKIFGGHLRSELRVPGLKDSVTLEPYKPLQLDIGASHVNNIVDALKGITYT 657
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQ 294
E L G G G TAKK V I +L +L+LHL RF Y + G+ K+ K V +PL+
Sbjct: 658 EALTG----DFGGKG-TTAKKQVFIDSLPPVLVLHLKRFQYDNSFSGTQKIWKKVGYPLE 712
Query: 295 LVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDD 346
L + +++ P+ + K+ L + V HHG+ + GHYT D R + +W+ DD
Sbjct: 713 LQIPKEVF-PPAKRAQLQISGLPKFRLTSVVYHHGKSAAGGHYTVDVLRQDSREWIRMDD 771
Query: 347 ASVTAIGTSKV 357
+ I V
Sbjct: 772 TVIRRIRPEDV 782
>gi|240273779|gb|EER37298.1| ubiquitin-specific protease [Ajellomyces capsulatus H143]
Length = 739
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 197/371 (53%), Gaps = 34/371 (9%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 262 PRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREFRV 321
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
+S + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 322 IDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 378
Query: 128 FIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 179
F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 379 FLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRSSG 438
Query: 180 FL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ + PE
Sbjct: 439 HISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTKPE 498
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 295
++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 499 TIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLEL 556
Query: 296 VLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
L +++ SA+G KY L + HHG++ S GHYT D R + +W+ DD
Sbjct: 557 ELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLDD 616
Query: 347 ASVTAIGTSKV 357
S+ + + +V
Sbjct: 617 TSIHRVRSEEV 627
>gi|400594709|gb|EJP62542.1| ubiquitin carboxyl-terminal hydrolase [Beauveria bassiana ARSEF
2860]
Length = 810
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/358 (35%), Positives = 195/358 (54%), Gaps = 32/358 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ LM CSPF L ++ R K+ P L A + F+ ++
Sbjct: 361 LEPRGLINTGNMCYMNSVLQVLMFCSPFYDFLDQISKRAAHSFKSETPLLDAMIMFMHEY 420
Query: 72 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 123
P+ +K + + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 421 RVLKSAPTNEQLRKSIRGEEIERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 475
Query: 124 EFLSFIMDQMHDELLKLQGESTSI----NGANTALV--SLAEEDEWETVGPKNKSAVTRT 177
EFL F++ + DE + ++ G+ TA S +W VG K ++AVTR+
Sbjct: 476 EFLGFLLQSLDDECTNVMNNASQTASQAAGSETASADGSTDPSGDWLEVGRKQRAAVTRS 535
Query: 178 Q-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
S + ++ +FGG L+S + G K S T +P+ L LDI S + + DALR + P
Sbjct: 536 SGSNTSTPVTKVFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPEIRNVVDALRGLTRP 595
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL 295
E L+G S G +TA K V I+TL +LILHL RF + ++ G+TK+ K+V +PL L
Sbjct: 596 ERLQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKNVGYPLDL 653
Query: 296 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+ R+ L S + KY+L++ + HHG++ S GHYTAD R + +WL DD
Sbjct: 654 EIPREALSRQSRQSLGVGALPKYKLISVIYHHGKNASGGHYTADVRRQDGREWLRLDD 711
>gi|189202394|ref|XP_001937533.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187984632|gb|EDU50120.1| ubiquitin carboxyl-terminal hydrolase 10 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 870
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 185/368 (50%), Gaps = 34/368 (9%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 66
K V L PRGL+N+GNLC++N+ LQ L+ C PF L ++ R + K+ P + A +
Sbjct: 407 KKVSFLEPRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIM 466
Query: 67 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
F+ DF ++ + K + G P +P V+K P N G+ QE
Sbjct: 467 FLRDFKLIDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QE 523
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVT 175
DA+EFL F++ +HDE + + A+T E + WE VG K K+AVT
Sbjct: 524 DAEEFLGFLLAGLHDECVHIIKTGKQSQPADTITSPKTERSGSVDGGWEEVGHKQKTAVT 583
Query: 176 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
+ + S ++ IFGG+L+S K G KAS T++P+ L LDI + ++ I DAL+
Sbjct: 584 QNSGAIDIESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNL 643
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ E L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL
Sbjct: 644 TRLETLDG------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 697
Query: 294 QLVLGRDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTAD-ARYFNDQWLHF 344
+L L +++ P G +Y L V HHG++ S GHYT D R +W+
Sbjct: 698 ELELPKEVF-PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDIRRQEGREWIRM 756
Query: 345 DDASVTAI 352
DD + I
Sbjct: 757 DDTMIRRI 764
>gi|336269021|ref|XP_003349272.1| hypothetical protein SMAC_12609 [Sordaria macrospora k-hell]
gi|380089845|emb|CCC12378.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1000
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/374 (33%), Positives = 200/374 (53%), Gaps = 38/374 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 539 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 598
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 599 KV------IDSAVSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 652
Query: 123 QEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTR 176
+EFL F+++ +HDE +++ ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 653 EEFLGFLLEGLHDECTHVMRTLPVSTTSTAPNSSLPSPTTSNAGDDWLEVGPRQKAAITR 712
Query: 177 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 713 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 772
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 292
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 773 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 830
Query: 293 LQLVLGRDLLV--------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLH 343
L+L + R+++ +A+ KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 831 LELEIPREVVSRQKRNTIHADNADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 890
Query: 344 FDDASVTAIGTSKV 357
DD + + V
Sbjct: 891 IDDTVIRRVRPEDV 904
>gi|396469489|ref|XP_003838418.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
maculans JN3]
gi|312214986|emb|CBX94939.1| similar to ubiquitin carboxyl-terminal hydrolase 10 [Leptosphaeria
maculans JN3]
Length = 881
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 186/372 (50%), Gaps = 32/372 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 66
K V + PRGL+N+GNLC++N+ LQ L+ C+PF L ++ R K+ P + A +
Sbjct: 418 KKVAFIEPRGLVNTGNLCYMNSILQVLLFCAPFYDFLDQVAKRAAHSFKSETPLVDAMIM 477
Query: 67 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
F+ DF +S + K+ + G P +P V+K P N G +QE
Sbjct: 478 FMRDFKLIDSAASVDQLRLRLKDNELEQYGDPLTPEYVYDVIKRL-PRFDNMKRG--QQE 534
Query: 121 DAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNKSAVT 175
DA+EFL F++ +HDE +L Q +S + T + E W VGPK K+AVT
Sbjct: 535 DAEEFLGFLLAGLHDECAQLIKKDRQNQSQEPLASATGEQPGSGESGWHEVGPKQKTAVT 594
Query: 176 RTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
++ + + ++ IFGG+L+S K G K S T++P+ L LDI ++ I DAL+
Sbjct: 595 QSSGTIEFETPITKIFGGKLRSEYKKPGEKPSVTLEPYQPLQLDIGEPHINNISDALKNL 654
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ E L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL
Sbjct: 655 TRLETLDG------AARGARASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPL 708
Query: 294 QLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTAD-ARYFNDQWLHFD 345
+L L +++ +Y L V HHG++ S GHYT D R +W+ D
Sbjct: 709 ELELPKEVFAQHKRASFQKQGGFPRYRLTGVVYHHGKNASGGHYTVDLRRQEGKEWIRMD 768
Query: 346 DASVTAIGTSKV 357
D + I V
Sbjct: 769 DTIIQRIRAEDV 780
>gi|336472069|gb|EGO60229.1| hypothetical protein NEUTE1DRAFT_119446 [Neurospora tetrasperma
FGSC 2508]
Length = 1079
Score = 192 bits (487), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 617 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 676
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 677 KV------IDSAVSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 730
Query: 123 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 176
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 731 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 790
Query: 177 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 791 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 850
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 292
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 851 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 908
Query: 293 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLH 343
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 909 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 968
Query: 344 FDDASVTAI 352
DD + +
Sbjct: 969 IDDTVIRRV 977
>gi|85098196|ref|XP_960580.1| hypothetical protein NCU04333 [Neurospora crassa OR74A]
gi|28922080|gb|EAA31344.1| predicted protein [Neurospora crassa OR74A]
Length = 1104
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 642 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 701
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 702 KV------IDSAVSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 755
Query: 123 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 176
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 756 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 815
Query: 177 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 816 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 875
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 292
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 876 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 933
Query: 293 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLH 343
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 934 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 993
Query: 344 FDDASVTAI 352
DD + +
Sbjct: 994 IDDTVIRRV 1002
>gi|402909222|ref|XP_003917322.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Papio anubis]
Length = 926
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 208/402 (51%), Gaps = 64/402 (15%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 551 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 606
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 607 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 662
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALVSLAEE-------- 160
+ RQEDA+E+L FI++ +H+E+L L+ E +I NG V+ E+
Sbjct: 663 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNEKLTISNGPQNHSVTEEEQEEQGEGSE 722
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L L
Sbjct: 723 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQL---- 778
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 779 -------------VARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 822
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 823 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 881
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 882 VFQIGLNGWLRIDDQTVKVISQYQVVKPTAERTAYLLYYRRV 923
>gi|383863085|ref|XP_003707013.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Megachile
rotundata]
Length = 880
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 131/385 (34%), Positives = 195/385 (50%), Gaps = 55/385 (14%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPK-AGYPTLTAFVG 66
K LLPRGL N N C++N+ LQAL++C PF LL L ++ + K + P + +
Sbjct: 514 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLMALPHSKSLSKMSSTPLIDNMIK 573
Query: 67 FVSDFDTPSGGS--------SKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGR 116
FV +F S + +K+ +++DI G F PS +LKN + S+ GR
Sbjct: 574 FVHEFTPLSDAARLARKDRANKRGEDTIVDIQSGVAFEPSYVYTMLKNTSAAGVFSVEGR 633
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
QEDA+EFLS +++ ++DE+L E +GPKNK ++TR
Sbjct: 634 --QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNKGSITR 666
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
F + LSDIF GQL+S V G + + VQPF L LDI E +++ AL +
Sbjct: 667 CTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDI--EKAESVKGALEILVGK 724
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
+ LEG S T + A K V ++ L ILILHL F Y +K+ KSV FP+ L
Sbjct: 725 DQLEGMTCSKTKQQ--IEAWKQVTLEELPVILILHLKWFDYKLDVCSKIVKSVEFPVDLK 782
Query: 297 LGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASV 349
L L +P+A + + Y+L A H G++ +KGHY DA + W+ +DD+S+
Sbjct: 783 LDSKFL-SPNAVKKLNPKQKHYKLFAVTYHDGKEATKGHYVTDAFHVGYGGWVRYDDSSL 841
Query: 350 TAIGTSKVLHDQ----AYVLFYKQV 370
+ S VL Y+L+Y++
Sbjct: 842 KGVSESNVLKPTPPRVPYLLYYRRC 866
>gi|350294724|gb|EGZ75809.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 1165
Score = 191 bits (486), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 197/369 (53%), Gaps = 38/369 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L++C PF L ++ + + + P L A + F+ +F
Sbjct: 703 LEPRGLVNTGNMCYMNSILQVLVNCIPFYDFLDQVSKKAVHSFNSETPLLDAMIMFMREF 762
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S+ + R E + FTP+ V ++I PR Q+DA
Sbjct: 763 KV------IDSAVSIDQLKRRLKSEELEQYGEAFTPEFVYDAIRKLPRFASMRRGHQQDA 816
Query: 123 QEFLSFIMDQMHDELLKLQGE---STSINGANTALVSLAEE---DEWETVGPKNKSAVTR 176
+EFL F+++ +HDE + ST+ N++L S D+W VGP+ K+A+TR
Sbjct: 817 EEFLGFLLEGLHDECTHVMSTLPVSTTSTAPNSSLPSPTASNTGDDWLEVGPRQKAAITR 876
Query: 177 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T + S ++ IFGGQL+S ++ G K+S T++P+ L LDI + V I DALR +
Sbjct: 877 TSGYSSSISPITRIFGGQLRSELRIPGLKSSVTLEPYQPLQLDIGAPEVRNIVDALRGLT 936
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFP 292
PE + G S G T K V I++L +LILHL RF + ++ G+ K+ K V +P
Sbjct: 937 RPETIHGDFNSPHGKDAKAT--KQVFIESLPPVLILHLKRFQFDAEGHGTIKIWKKVGYP 994
Query: 293 LQLVLGRDLLV-----TPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLH 343
L+L + R+++ T AE KY L+ V HHG++ S GHYT D R + +W+
Sbjct: 995 LELEIPREVVSRQKRNTTHAENADLLKYRLITVVYHHGKNASGGHYTVDVRRQDGREWVR 1054
Query: 344 FDDASVTAI 352
DD + +
Sbjct: 1055 IDDTVIRRV 1063
>gi|451851979|gb|EMD65274.1| hypothetical protein COCSADRAFT_87496 [Cochliobolus sativus ND90Pr]
Length = 882
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/372 (33%), Positives = 188/372 (50%), Gaps = 42/372 (11%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 66
K V + PRGL+NSGNLC++N+ LQ L+ C PF L ++ R + K+ P + A +
Sbjct: 419 KKVSFIEPRGLVNSGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLIDAMIM 478
Query: 67 FVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
F+ DF ++ + K+ + G P +P V+K P N G +QE
Sbjct: 479 FLRDFKLIDSAATVEQLRLRLKSNDIEQYGDPLAPEYVYDVIKRL-PRFDNMKRG--QQE 535
Query: 121 DAQEFLSFIMDQMHDELLKL---------QGESTSINGANTALVSLAEEDEWETVGPKNK 171
DA+EFL F++ +HDE +++ G TS N T V + WE VG K +
Sbjct: 536 DAEEFLGFLLAGLHDECVQIIKSGKQSQPAGAVTSENSEQTGSV----DGGWEEVGHKQR 591
Query: 172 SAVTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 229
+AVT+ + S ++ IFGG+L+S K G KAS T++P+ L LDI ++ I DA
Sbjct: 592 TAVTQNSGAIDIESPITKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEPNINNISDA 651
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 289
L+ + E L+G G + K V I++L +LILHL RF Y +G K+ K +
Sbjct: 652 LKNLTRLETLDG------AARGAKASTKQVHIESLPPVLILHLKRFHYDEKGPQKIWKKI 705
Query: 290 RFPLQLVLGRDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTAD-ARYFNDQ 340
+PL+L L +++ P G +Y L V HHG++ S GHYT D R +
Sbjct: 706 GYPLELELPKEVF-PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDLRRQEGKE 764
Query: 341 WLHFDDASVTAI 352
W+ DD + I
Sbjct: 765 WIRMDDTIIRRI 776
>gi|330922068|ref|XP_003299682.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
gi|311326539|gb|EFQ92222.1| hypothetical protein PTT_10730 [Pyrenophora teres f. teres 0-1]
Length = 887
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 184/363 (50%), Gaps = 34/363 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GNLC++N+ LQ L+ C PF L ++ R + K+ P + A + F+ DF
Sbjct: 429 IEPRGLVNTGNLCYMNSILQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDAMIMFLRDF 488
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
++ + K + G P +P V+K P N G+ QEDA+EF
Sbjct: 489 KLIDSAATVEQLRLRLKGNDLEQYGEPLTPEYVYDVIKRL-PRFDNMKRGQ--QEDAEEF 545
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAE-----EDEWETVGPKNKSAVTRTQSF 180
L F++ +HDE +++ A+T E + WE VG K K+AVT+
Sbjct: 546 LGFLLAGLHDECVQIIKTGKQSQSADTVTSPKTERSGSVDGGWEEVGHKQKTAVTQNSGA 605
Query: 181 L--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG+L+S K G KAS T++P+ L LDI + ++ I DAL+ + E
Sbjct: 606 IDIESPVTKIFGGKLRSEYKRPGEKASVTLEPYQPLQLDIGEQNINNISDALKNLTRLET 665
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
L+G G + K V I+TL +LILHL RF Y +G K+ K + +PL+L L
Sbjct: 666 LDG------AARGAKASTKQVHIETLPPVLILHLKRFHYDEKGPQKIWKKIGYPLELELP 719
Query: 299 RDLLVTPSAEGR--------KYELVATVTHHGRDPSKGHYTAD-ARYFNDQWLHFDDASV 349
+++ P G +Y L V HHG++ S GHYT D R +W+ DD +
Sbjct: 720 KEVF-PPHKRGSYQVQGGFPRYRLTGVVYHHGKNASGGHYTVDIRRQEGKEWIRMDDTMI 778
Query: 350 TAI 352
I
Sbjct: 779 RRI 781
>gi|154304421|ref|XP_001552615.1| hypothetical protein BC1G_09086 [Botryotinia fuckeliana B05.10]
Length = 880
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 199/379 (52%), Gaps = 43/379 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 416 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 475
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 122
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 476 SVIDSAKSVEQLKMRLKDGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 529
Query: 123 QEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGP 168
+EFL F+++ +HDE + ++ +S N A+T +++ +D W+ VGP
Sbjct: 530 EEFLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGP 589
Query: 169 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 226
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 590 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNI 649
Query: 227 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 285
DALR + E L G S G VTA K V I+T+ +LILHL RF Y + G T K+
Sbjct: 650 VDALRGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKI 707
Query: 286 HKSVRFPLQLVLGRDLLVTP-----SAEG-RKYELVATVTHHGRDPSKGHYTADARYFN- 338
K V +PL+L L +++ + +G KY L+ V HHG++ S GHYT D R +
Sbjct: 708 WKKVEYPLELELPKEVFPRTRRSVFAHDGYPKYRLIGVVYHHGKNASGGHYTVDVRRQDG 767
Query: 339 DQWLHFDDASVTAIGTSKV 357
+W+ DD + + + V
Sbjct: 768 KEWIRLDDTVIKRVRSEDV 786
>gi|195378014|ref|XP_002047782.1| GJ13624 [Drosophila virilis]
gi|194154940|gb|EDW70124.1| GJ13624 [Drosophila virilis]
Length = 1601
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/389 (32%), Positives = 200/389 (51%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY-------PTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1184 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1238
Query: 67 FVSDFDTPSGGSSKKKNISV--------------LDIGRPFSPSMFEAVLKNFTPDVPNS 112
F+S+F + GG+ + N + L F P+ + K +
Sbjct: 1239 FMSNFSSLPGGTRLRLNNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1295
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L+ + + NG + D W+ +
Sbjct: 1296 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNAQQNGEEQEQDTEDGGDVWQMICN 1353
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1354 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1411
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1412 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGCTKILK 1469
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + + WL +
Sbjct: 1470 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNSWLRY 1529
Query: 345 DDASVTAIGTSKVLHDQA----YVLFYKQ 369
DD+SV IG +VL Y+L+Y++
Sbjct: 1530 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 1558
>gi|367039059|ref|XP_003649910.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
gi|346997171|gb|AEO63574.1| hypothetical protein THITE_2109034 [Thielavia terrestris NRRL 8126]
Length = 958
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 197/376 (52%), Gaps = 45/376 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ K+ P + A V F+ +F
Sbjct: 497 LEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVNKNAAHSFKSETPLVDAMVMFMREF 556
Query: 72 ---DTPSGGSSKKKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDA 122
D+ + KK + D G PF+P +++A+ L F + R Q+DA
Sbjct: 557 KVIDSAPSVAQLKKRLKSEDYEKYGEPFTPEFVYDAIRTLPRF------ASMRRGHQQDA 610
Query: 123 QEFLSFIMDQMHDELLKL------------QGESTSINGANTALVSLAEEDEWETVGPKN 170
QEFL F+++ +HDE ++ S ++ A L D+W VGP+
Sbjct: 611 QEFLGFLLEGLHDECAQVMRAAPASTASTAPSSSLPSPTSSRANDPLEGGDDWLEVGPRQ 670
Query: 171 KSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 228
+SAVTR+ S PS ++ IFGGQL+S ++ GNK S T++P+ L LDI S + I D
Sbjct: 671 RSAVTRSSGHSHTPSPVTKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGSPEIRNIID 730
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKL 285
AL+ + PE L G S G V A K V I+++ +LILHL RF + G G+ K+
Sbjct: 731 ALKGLTRPEVLHGDFNSPHGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKI 788
Query: 286 HKSVRFPLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
K V +PL+ R++L + ++ +Y L+A V HHG++ S GHYT D R
Sbjct: 789 WKKVGYPLEFEFPREVLSRQTRNNILAENSGPPRYRLIAVVYHHGKNASGGHYTVDVRRQ 848
Query: 338 ND-QWLHFDDASVTAI 352
+ +W+ DD + +
Sbjct: 849 DGREWIRIDDTVIRRV 864
>gi|320040494|gb|EFW22427.1| ubiquitin C-terminal hydrolase [Coccidioides posadasii str.
Silveira]
Length = 592
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 123 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 182
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 183 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 239
Query: 128 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 180
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 240 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 299
Query: 181 LPSA--LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 300 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 359
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 296
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 360 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 417
Query: 297 L--------GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 418 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 477
Query: 348 SVTAIGTSKV 357
+ + + V
Sbjct: 478 VIRRVRSEDV 487
>gi|225555478|gb|EEH03770.1| ubiquitin-specific protease [Ajellomyces capsulatus G186AR]
Length = 947
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 468 IEPRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREF 527
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+S + K + G F P V+++ P + G Q+DAQEF
Sbjct: 528 RVIDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 584
Query: 126 LSFIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
L F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 585 LGFLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRS 644
Query: 178 QSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ +
Sbjct: 645 SGHISVESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTK 704
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE ++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL
Sbjct: 705 PETIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPL 762
Query: 294 QLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L L +++ SA+G KY L + HHG++ S GHYT D R + +W+
Sbjct: 763 ELELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRL 822
Query: 345 DDASVTAIGTSKV 357
DD S+ + + +V
Sbjct: 823 DDTSIHRVRSEEV 835
>gi|327352557|gb|EGE81414.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ATCC
18188]
Length = 932
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 127/373 (34%), Positives = 200/373 (53%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 453 IEPRGLLNTGNMCYMNSILQILVFCVPFYEFLDKIGRRAVHSFKSDLPLIDAMIMFMREF 512
Query: 72 DTPSGGSSKKK-----NISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+S +K + L++ G F P V+++ P + G Q+DAQEF
Sbjct: 513 RVIDAATSVEKLRLRLKQNELELYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 569
Query: 126 LSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRT 177
L F+++++HDE + ++TS VS E + W VG K K A+TR+
Sbjct: 570 LGFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRS 629
Query: 178 QSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 630 SGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 689
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE ++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V +PL
Sbjct: 690 PETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPL 747
Query: 294 QLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L L ++ SA+G KY L + HHG++ S GHYT D R + +W+
Sbjct: 748 ELELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRL 807
Query: 345 DDASVTAIGTSKV 357
DD + + + V
Sbjct: 808 DDTVIRRVRSEDV 820
>gi|340914994|gb|EGS18335.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1016
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/375 (33%), Positives = 202/375 (53%), Gaps = 39/375 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P L + F+ +F
Sbjct: 554 LEPRGLVNTGNMCYMNSVLQVLLFCTPFYDFLDQVSKKAAHSFKSETPLLDTMIMFMREF 613
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+ S+ + + + P +E FTP+ V ++I PR Q+DA
Sbjct: 614 KAIASASTAEL------LRKRLRPEEYEKYGDPFTPEFVYDTIRKLPRFSSMRRGHQQDA 667
Query: 123 QEFLSFIMDQMHDELLKLQGE-----STSINGANTALVSLAEE-DEWETVGPKNKSAVTR 176
QEFL F+++ +HDE ++ ST+ N + ++ + AE ++W VGP+ +SA+TR
Sbjct: 668 QEFLGFLLEGLHDECSQVTRNVQSTVSTTANSSVSSPTAAAEGGNDWLEVGPRQRSAITR 727
Query: 177 TQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
+ + S ++ IFGGQL+S ++ GNK S T++P+ L LDI + V TI DAL+ +
Sbjct: 728 SSGYSQSSSPITKIFGGQLRSELRVPGNKNSVTLEPYQPLQLDIGAPEVRTIIDALKGLT 787
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 291
PE + G S G V A K V I+++ +LILHL RF + G G+ K+ K V +
Sbjct: 788 HPEAIYGDFNSPRGKD--VRATKQVFIESVPPVLILHLKRFQFDAEGYGGTVKIWKKVGY 845
Query: 292 PLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
PL+ R++L + + +Y L+A V HHG++ S GHYT D R + +W+
Sbjct: 846 PLEFDFPREVLSRSTRNSILNDNTGAPRYRLIAVVYHHGKNASGGHYTVDVRRQDGKEWI 905
Query: 343 HFDDASVTAIGTSKV 357
DD + + +V
Sbjct: 906 RIDDTVIRRVRDEEV 920
>gi|325094789|gb|EGC48099.1| ubiquitin-specific protease [Ajellomyces capsulatus H88]
Length = 924
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/373 (33%), Positives = 198/373 (53%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 445 IEPRGLVNTGNMCYMNSVLQILVFCVPFYEFLDKIGRRAVHTFKSDLPLIDAMIMFMREF 504
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+S + K + G F P V+++ P + G Q+DAQEF
Sbjct: 505 RVIDAATSVEQLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 561
Query: 126 LSFIMDQMHDELLKLQGE--------STSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
L F+++++HDE + + ST + + + S + W VG K + A+TR+
Sbjct: 562 LGFLLEELHDECTQAAKQVSSTGSDISTPVETDSASAASELSVEGWLEVGHKQRPAITRS 621
Query: 178 QSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ +
Sbjct: 622 SGHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVINIIDALKGLTK 681
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE ++G SS G VTA K V I+ L +LILHL RF Y ++G+ K+ K V +PL
Sbjct: 682 PETIQGDFNSSRGPK--VTATKQVFIENLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPL 739
Query: 294 QLVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L L +++ SA+G KY L + HHG++ S GHYT D R + +W+
Sbjct: 740 ELELPKEVFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRL 799
Query: 345 DDASVTAIGTSKV 357
DD S+ + + +V
Sbjct: 800 DDTSIHRVRSEEV 812
>gi|195019971|ref|XP_001985094.1| GH16868 [Drosophila grimshawi]
gi|193898576|gb|EDV97442.1| GH16868 [Drosophila grimshawi]
Length = 1668
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 199/389 (51%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1252 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVMSEVKTPTVNAMMS 1306
Query: 67 FVSDFDTPSGGS----SKKKNISV----------LDIGRPFSPSMFEAVLKNFTPDVPNS 112
F+S+F + GG+ S K + L F P+ + K +
Sbjct: 1307 FMSNFSSLPGGTRLRFSNNKAAQIKGKDEFAGVDLQCDLAFEPT---EIYKLWNDSREEH 1363
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L+ + + NG D W+ +
Sbjct: 1364 VEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPNARQNGEEQEQEPEDGGDVWQMICN 1421
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + LSDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1422 NRNKGSVTRQTDFGRTPLSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1479
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1480 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1537
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + + WL +
Sbjct: 1538 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNSWLRY 1597
Query: 345 DDASVTAIGTSKVLHDQ----AYVLFYKQ 369
DD+SV IG +VL Y+L+Y++
Sbjct: 1598 DDSSVKPIGEKQVLQPHTPRVPYLLYYRR 1626
>gi|406867893|gb|EKD20930.1| putative ubiquitin carboxyl-terminal hydrolase 10 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 852
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/382 (34%), Positives = 202/382 (52%), Gaps = 47/382 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ R K+ P + A + F+ +F
Sbjct: 396 LKPRGLVNTGNMCYMNSVLQVLIFCTPFFSFLDQVSKRAAHNFKSETPLIDAMILFLQEF 455
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S + K + G PF+P V+ N P S R Q+DA+EF
Sbjct: 456 PVIDSAKSVEQLKMRLKEGDLEQYGDPFTPDFVYNVI-NRLPRF--SSMRRGHQQDAEEF 512
Query: 126 LSFIMDQMHDE-LLKLQGESTSIN----------------GANTALVSLAEEDEWETVGP 168
L F+++ +HDE +L ++ S++ N G+ VS A+E+ W VGP
Sbjct: 513 LGFLLEGLHDECVLAMRNGSSNTNSAIATPNGPSSPVSETGSTQGSVS-AKENGWLEVGP 571
Query: 169 KNKSAVTRTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 226
K K+AVTR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI + V+ I
Sbjct: 572 KQKAAVTRSSGTISTGSPVTKIFGGNLRSELRVPGLKDSVTLEPYQPLQLDIGAPNVNNI 631
Query: 227 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 285
DAL+ + E L G S G VTA K V I+TL +LILHL RF Y + G T K+
Sbjct: 632 VDALKGLTRSEVLHGDFKSPKGPN--VTATKQVFIETLPPVLILHLKRFQYDNAGGTQKI 689
Query: 286 HKSVRFPLQLVLGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARY 336
K V +PL+L + +++ S + R KY L+A V HHG++ + GHYT D R
Sbjct: 690 WKKVGYPLELEIPKEVF---SRQKRAAYAHSGLPKYRLIAAVYHHGKNATGGHYTVDVRR 746
Query: 337 FND-QWLHFDDASVTAIGTSKV 357
+ +W+ DD + + + +V
Sbjct: 747 QDGREWVRLDDTVIRRVRSEEV 768
>gi|171694367|ref|XP_001912108.1| hypothetical protein [Podospora anserina S mat+]
gi|170947132|emb|CAP73937.1| unnamed protein product [Podospora anserina S mat+]
Length = 1020
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 197/378 (52%), Gaps = 42/378 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ L+ C PF L ++ + K+ P + A + F+ +F
Sbjct: 565 IEPRGLVNTGNMCYMNSVLQVLIFCIPFYDFLDQVSKKATHSFKSETPLIDALIMFMREF 624
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QEDA 122
+S + R P E ++FTP+ V +I PR Q+DA
Sbjct: 625 KIIDSATSTDL------LQRRLKPEELEQYGESFTPEFVYEAIRKLPRFASMRRGHQQDA 678
Query: 123 QEFLSFIMDQMHDELLKL------QGESTSINGANTALV------SLAEEDEWETVGPKN 170
QEFL F+++ +HDE ++ ST+ N ++ SL D+W VGP+
Sbjct: 679 QEFLGFLLEGLHDECAQVMRTAPVSAVSTAPNSTPSSPTTSKPNGSLEGADDWLEVGPRQ 738
Query: 171 KSAVTRTQSF-LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 229
++AVTR+ L S ++ IFGG+L+S ++ GNK S T++P+ L LDI + + I DA
Sbjct: 739 RAAVTRSSGHSLASPINKIFGGKLRSELRVPGNKTSVTLEPYEPLQLDIGAPEIRNIIDA 798
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLH 286
L+ + PE L G S G V A K + I+++ +LILHL RF + G G+ K+
Sbjct: 799 LKGLTRPETLHGDFNSPHGKN--VKATKQIFIESVPPVLILHLKRFQFDAEGQGGTVKIW 856
Query: 287 KSVRFPL-----QLVLGRDLLVTPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFND- 339
K + +PL Q VL R + EG +Y+L A V HHG++ S GHYT D R +
Sbjct: 857 KKIGYPLEFEFPQEVLSRSQRNSTVHEGVPRYKLTAVVYHHGKNASGGHYTVDVRRQDGR 916
Query: 340 QWLHFDDASVTAIGTSKV 357
+W+ DD + + + V
Sbjct: 917 EWIRIDDTVIRRVRSEDV 934
>gi|453080075|gb|EMF08127.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 920
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 193/369 (52%), Gaps = 33/369 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ R + K+ P + A + F+ +F
Sbjct: 452 LEPRGLVNTGNMCYMNSILQVLVFCVPFYNFLDQVAKRTVHSMKSDTPLVDAMIMFMKEF 511
Query: 72 DTPSGGSSKKKNISVL------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+ +S S+L G +P V++N + N G Q+DA+EF
Sbjct: 512 KPLATAASADAVRSLLKQEQLEQYGDSVTPDYVYEVIRNLS-RFANMRRG--HQQDAEEF 568
Query: 126 LSFIMDQMHDELLKLQ----GESTSINGANTA--LVSLAEEDEWETVGPKNKSAVTRT-- 177
L F+++++HDE +K+ + NGA + ++S + D W VGPK KS +TRT
Sbjct: 569 LGFLLEELHDECVKVMLGQTEQQPQTNGAASPETVLSPSSADGWLEVGPKQKSVITRTTG 628
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
Q + S ++ IF GQ ++ + G K S T++P+ L LDI E V I DAL+ + E
Sbjct: 629 QQDIASPITRIFAGQTRAEFRVPGQKDSVTLEPYKPLQLDIGGEHVSNIVDALKGLTNTE 688
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 295
L G GN TAKK + I+TL +LILHL RF Y S + + K+ K V +PL+L
Sbjct: 689 TLTG-EFGGRGN----TAKKQMFIETLPPVLILHLKRFEYNSSTKATQKIWKKVGYPLEL 743
Query: 296 VLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDAS 348
+ +++ G KY L + V HHG+ + GHYT D R + +W+ DD
Sbjct: 744 QIPKEVFSPAKRAGLQISGLPKYRLTSVVYHHGKSAAGGHYTVDVLRQDSREWIRMDDTI 803
Query: 349 VTAIGTSKV 357
+ I + V
Sbjct: 804 IRRIRSEDV 812
>gi|392862091|gb|EAS37301.2| ubiquitin C-terminal hydrolase [Coccidioides immitis RS]
Length = 892
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539
Query: 128 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 180
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599
Query: 181 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 296
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717
Query: 297 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 777
Query: 348 SVTAIGTSKV 357
+ + + V
Sbjct: 778 VIRRVRSEDV 787
>gi|406702466|gb|EKD05482.1| ubiquitin-specific protease [Trichosporon asahii var. asahii CBS
8904]
Length = 1075
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 143/425 (33%), Positives = 211/425 (49%), Gaps = 71/425 (16%)
Query: 7 PVKSVKDLLPRGLINSGNLCFLNAT-------------LQALMSCSPFVQLLQELRTR-- 51
P + ++PRGLIN+GN+CF N LQ L C+PF +L +EL R
Sbjct: 660 PAGAPAPIVPRGLINTGNMCFANTVGYFCLSCANPPQILQVLRYCTPFTELFEELGKRLK 719
Query: 52 -DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRP----FSP-SMFEAVLKNF 105
D+ + P L A V F+ +F G S+ N + G+ F P ++++A+ +N
Sbjct: 720 ADLARR-TPLLEAMVVFLREFA--PGPSTNGSNGTSTPKGKARDNAFIPENVYDAMKENK 776
Query: 106 TPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ---------GESTSINGANTALVS 156
D R QEDA+E+L F ++ +H+ELL L +S + NG + +
Sbjct: 777 RFDT----MRRGYQEDAEEYLGFFLNTLHEELLDLYSRTAPAKPVAKSAAANGDSERTID 832
Query: 157 LA--------EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV 208
++D+W VG K K+ V RT S++S IFGG L+SV+ G+K S T+
Sbjct: 833 RPVSPKGRRNDDDDWLEVGKKQKTHVVRTAETRESSVSRIFGGSLRSVLHTPGSKDSVTL 892
Query: 209 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 268
+P+ L LDI + VHT+ DALR + PE + G S+ NA V A K V ++TL +L
Sbjct: 893 EPYQPLQLDIQANEVHTLVDALRHLNEPETVPGV-WSAARNAN-VDATKQVYLETLPPVL 950
Query: 269 ILHLMRFSYGSQGST--KLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGR 323
ILHL RF Y Q K K V + +L + + +++P + +G KY L V HHG
Sbjct: 951 ILHLKRFVYDPQEQNVVKRSKPVAYSTELTIPAE-IISPAKRTPQGIKYRLFGVVYHHGH 1009
Query: 324 DPSKGHYT-ADARYFNDQWLHFDDASVTAIGTSKVLHDQ-----------------AYVL 365
+ GHYT AR WLHFDD +V + T V+ + AY+L
Sbjct: 1010 SATGGHYTVCVARPDGTGWLHFDDETVQPVPTEDVIVSEEEERDGRAGTVAGREKCAYLL 1069
Query: 366 FYKQV 370
FY++V
Sbjct: 1070 FYQRV 1074
>gi|303321950|ref|XP_003070969.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240110666|gb|EER28824.1| Ubiquitin carboxyl-terminal hydrolase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 892
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/370 (33%), Positives = 194/370 (52%), Gaps = 33/370 (8%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSILQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFRV 482
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 IGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 539
Query: 128 FIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQSF 180
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 FLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSGH 599
Query: 181 LPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 IASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 659
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLV 296
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 MHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLELE 717
Query: 297 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 IPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDDT 777
Query: 348 SVTAIGTSKV 357
+ + + V
Sbjct: 778 VIRRVRSEDV 787
>gi|392580194|gb|EIW73321.1| hypothetical protein TREMEDRAFT_73044 [Tremella mesenterica DSM 1558]
Length = 1120
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 202/405 (49%), Gaps = 53/405 (13%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVGFVSDFD 72
LPRGLIN+GN+CF N LQ L+ C PF QLL+EL R G P L A + F+ +F+
Sbjct: 719 LPRGLINTGNMCFANTILQVLVFCLPFTQLLEELGKRLKADLGRQTPLLEAMIVFLREFN 778
Query: 73 TPS--GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR--------QED 121
P G++ + + L G S + F P+ V ++ R QED
Sbjct: 779 LPDPVPGAAPSQQRNALINGSKHSRRDKDHRSTAFIPEHVYEAMKANKRFDFVQKGHQED 838
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTAL------------VSLAEEDE--WETVG 167
A+EF F+ D +H+E+LKL S++ ++ L VS ED W VG
Sbjct: 839 AEEFFGFLNDTLHEEILKLVSRSSNRKISSGQLPNGDTDKHIRRPVSPGAEDSSGWLEVG 898
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
K + R+ SA+S +FGG L+SV++ GNK S T++PF L LDI S+ V TIE
Sbjct: 899 KKQRVHQVRSVESHESAISRLFGGTLRSVLRVPGNKDSVTLEPFKTLALDIRSD-VTTIE 957
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKL 285
DALR + PE + G + S V A K V I+T +L+LHL RF Y Q K
Sbjct: 958 DALRHIAEPEIVPGVYSPSRKEK--VDASKQVTIETFPPVLVLHLKRFEYDQVEQRVFKR 1015
Query: 286 HKSVRFPLQLVLGRDLLVTPSAEGR--KYELVATVTHHGRDPSKGHYT-ADARYFNDQWL 342
K V + +L++ + +V+P+ G KY L HHG GHYT A AR W+
Sbjct: 1016 DKPVAYGTELIIPSE-VVSPTKRGHPVKYRLFGVDYHHGASSQGGHYTLAAARQDGSGWI 1074
Query: 343 HFDDASVTAIGTSKVLHDQ-----------------AYVLFYKQV 370
HFDD + +A+ T V+ + AY+LFY++V
Sbjct: 1075 HFDDETHSAVPTEAVVVSESEAVSGRAGLIGGREKCAYLLFYQRV 1119
>gi|346970069|gb|EGY13521.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae
VdLs.17]
Length = 927
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 195/372 (52%), Gaps = 31/372 (8%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFV 65
+ VK + PRGL+N GN+C++N+ LQ L+ C PF L ++ + +P K+ P L A +
Sbjct: 477 EKVKYVEPRGLVNIGNMCYMNSVLQVLLFCVPFYDFLDQI-SEKVPLSFKSQTPILDAMI 535
Query: 66 GFVSDFDTPSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 119
F+ +F + G S K N + G F+P E + + PD R Q
Sbjct: 536 LFMREFQVINSGDSAAKLRKLLKNEELEQYGTSFTP---EFIYQAIEPDKRFENMRRGHQ 592
Query: 120 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTR 176
+DA+EF ++ + DE K+ G ++ N + A S A D W VG K ++AVTR
Sbjct: 593 QDAEEFFGLLLQSLDDECAKVMGVASG-NAPHPAPASANADATADGWLEVGAKQRAAVTR 651
Query: 177 TQSFLPS-ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S ++ IFGG L+S ++ G + S T +P+ L LDI + V + DAL+ +A
Sbjct: 652 SSGASSSTPITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTA 711
Query: 236 PENLE--GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFP 292
E LE G+ + NA VV K I TL +LILHL RF + ++ G+TK+ K V +P
Sbjct: 712 HEKLEGSGFNSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYP 768
Query: 293 LQL-----VLGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFD 345
L+L L R + EG KY+L+A V HHG+ + GHYTAD R ++ +W+ D
Sbjct: 769 LELEIPVQALARQWRASNKGGEGPKYKLIAVVYHHGKHANGGHYTADVRRQDEHEWIRLD 828
Query: 346 DASVTAIGTSKV 357
D + + + V
Sbjct: 829 DTVIRRVRSEDV 840
>gi|307182775|gb|EFN69898.1| Ubiquitin carboxyl-terminal hydrolase 10 [Camponotus floridanus]
Length = 905
Score = 187 bits (476), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 201/394 (51%), Gaps = 68/394 (17%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTA 63
K LLPRGL N N C++N+ LQAL++C PF LL+ + +PK + P +
Sbjct: 535 KQTVSLLPRGLTNRSNYCYINSILQALLACPPFYNLLKAM---PLPKNRGKNSATPLIDN 591
Query: 64 FVGFVSDFDTPSGGSS----------KKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 111
V FV +F TP ++ K+ +V+DI G F PS +LK+ +
Sbjct: 592 MVKFVREF-TPLTEAARMPRKDRVHNKRGEDTVIDIHSGVAFEPSYIYTMLKHTSAAGAF 650
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK 171
S+ GR QEDA+EFLS +++ ++DE+L E +GPKNK
Sbjct: 651 SVEGR--QEDAEEFLSCLLNGINDEML-------------------------EVMGPKNK 683
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
AVTR F + LSDIF GQL+S V G + + VQPF L LD+ + ++++AL
Sbjct: 684 GAVTRCTEFGRTPLSDIFRGQLRSRVSRAGEQPTDNVQPFFTLQLDV--QKAESVKNALE 741
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG----SQGSTKLHK 287
+ + +EG S T + A K V ++ L ILILHL F Y S G +K+ K
Sbjct: 742 ILVGKDQVEGMTCSKTRQQ--IEAWKQVTLEELPVILILHLKWFVYKFDKYSNGCSKILK 799
Query: 288 SVRFPLQLVLGRDLLVTPSA------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQ 340
S+ FP+ L + L +P+ + ++Y+L A H G++ +KGHY DA +
Sbjct: 800 SMEFPVDLKIDGKFL-SPNTVKKLGPKQKQYKLFAVTYHDGKEATKGHYITDAFHIGYGS 858
Query: 341 WLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 370
W+ +DD++V ++ S VL + Y+L+Y++
Sbjct: 859 WVRYDDSAVKSVPESNVLRPTSPRVPYLLYYRRC 892
>gi|225682996|gb|EEH21280.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 861
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/372 (33%), Positives = 193/372 (51%), Gaps = 41/372 (11%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R + K+ P + A + F+ +F
Sbjct: 352 PRGLVNTGNMCYMNSILQILVFCVPFYEFLDKISRRAVHSIKSELPLIDAMIMFMREFRV 411
Query: 74 PSGGSSKKK------NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
+S +K + G F P V+++ P + G Q+DAQEFL
Sbjct: 412 IDAATSAEKLRLRLKQNELEQYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 468
Query: 128 FIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQS 179
F+++++H+E + ++TS +T S A E + W VG K K ++TR+
Sbjct: 469 FLLEELHEECTQAGKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVGHKQKPSITRSSG 528
Query: 180 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V I DAL+ + PE
Sbjct: 529 HVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTNIIDALKGLTKPE 588
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 295
++G SS G VTA K V I+TL +LILHL RF Y S +G+ K+ K V +PL+L
Sbjct: 589 TMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQKIWKRVGYPLEL 646
Query: 296 VLGRDLLVTPSAEGR--------------KYELVATVTHHGRDPSKGHYTADARYFND-Q 340
+ R++ P KY L + HHG++ S GHYT D R + +
Sbjct: 647 EVPREVF-PPHRRNNLLAAQGSGGGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGRE 705
Query: 341 WLHFDDASVTAI 352
W+ DD + +
Sbjct: 706 WVRLDDTVIRRV 717
>gi|212538153|ref|XP_002149232.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
gi|210068974|gb|EEA23065.1| ubiquitin hydrolase, putative [Talaromyces marneffei ATCC 18224]
Length = 861
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 124/364 (34%), Positives = 185/364 (50%), Gaps = 27/364 (7%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L C PF Q L + R K+ P + A + F+ +F
Sbjct: 401 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDYIGHRATHSFKSDVPLIDATIMFMREF 460
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S+ K+ + + G F P V++ P + G Q+DAQEF
Sbjct: 461 RVIDAACSEDQLRMRLKHKELEEYGEAFIPEFVYEVIRQL-PRFRDMRRGH--QQDAQEF 517
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL--PS 183
L F ++++H+E T A++ S E W VG K KSA+TR+ + S
Sbjct: 518 LGFFLEELHEECAHALQSGTMQANADSGEPS--EASGWLEVGHKQKSAITRSSGDVDFES 575
Query: 184 ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 243
++ IFGG+++S K GNK S T++P+ L LDI S V+ I DAL+ + PE L G
Sbjct: 576 PITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVNNIIDALKGLTKPETLHGDF 635
Query: 244 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDL 301
+S G V A K V I+TL +LILHL RF Y S G+ K+ K V +PL+L + R++
Sbjct: 636 SSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPREV 693
Query: 302 LVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIG 353
Y L+ + HHG++ S GHYT D R + +W+ DD + +
Sbjct: 694 FPPHRRNAMAIHGGLPHYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRMDDTVIRRVR 753
Query: 354 TSKV 357
+ V
Sbjct: 754 SEDV 757
>gi|156055008|ref|XP_001593428.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980]
gi|154702640|gb|EDO02379.1| hypothetical protein SS1G_04855 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 885
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 127/380 (33%), Positives = 195/380 (51%), Gaps = 45/380 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 409 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSETPLIDAMIMFMREF 468
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 122
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 469 PVIDSAKSVEQLKMRLKEGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 522
Query: 123 QEFLSFIMDQMHDELL---------KLQGESTSINGANTALVSLAE-----EDEWETVGP 168
+EFL F+++ +HDE + K +T +N ++ A +D W+ VGP
Sbjct: 523 EEFLGFLLEGLHDECVHVMKSSDSSKTPAATTPMNAPSSPTSDSASRRGSIDDVWQQVGP 582
Query: 169 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 226
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 583 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPNIHNI 642
Query: 227 EDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KL 285
DAL+ + E L G S G VTA K V I+T+ +LILHL RF Y + G T K+
Sbjct: 643 IDALKGLTHSEVLHGDFKSPKGPN--VTATKQVFIETVPPVLILHLKRFQYDNTGGTQKI 700
Query: 286 HKSVRFPLQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFN 338
K V +PL+L L +++ + G KY L+ V HHG++ S GHYT D R +
Sbjct: 701 WKKVGYPLELELPKEVFPK-TKRGVFAHDGYPKYRLIGVVYHHGKNASGGHYTVDVRRQD 759
Query: 339 -DQWLHFDDASVTAIGTSKV 357
+W+ DD + + + V
Sbjct: 760 GKEWIRLDDTVIKRVRSEDV 779
>gi|119615876|gb|EAW95470.1| ubiquitin specific peptidase 10, isoform CRA_a [Homo sapiens]
Length = 861
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 196/374 (52%), Gaps = 43/374 (11%)
Query: 32 LQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSDFDT---PSGGSSKKKNIS 85
++AL++C P L++ L ++ P P + +FV +++F P +
Sbjct: 493 IKALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKI 552
Query: 86 VLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG- 142
V DI G F P+ +L +S+S + RQEDA+E+L FI++ +H+E+L L+
Sbjct: 553 VRDIRPGAAFEPTYIYRLLTVNK----SSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKL 608
Query: 143 --------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++ S+N EDEWE VGP+NK++VTR F+ + ++ I
Sbjct: 609 LSPSNEKLTISNGPKNHSVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGI 668
Query: 189 FGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
FGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 669 FGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQ 728
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P
Sbjct: 729 E---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGV 784
Query: 308 EG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL-- 358
+ R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 785 KNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKP 844
Query: 359 --HDQAYVLFYKQV 370
AY+L+Y++V
Sbjct: 845 TAERTAYLLYYRRV 858
>gi|358058490|dbj|GAA95453.1| hypothetical protein E5Q_02107 [Mixia osmundae IAM 14324]
Length = 837
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 200/418 (47%), Gaps = 75/418 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
PRGL+N+GNLCF N Q+L+ C PF + LL + + D+ P + A + ++ F
Sbjct: 393 PRGLVNTGNLCFANTIFQSLLYCGPFYNLISLLGQETSSDL-GGKTPLMEAMIVYLQLFR 451
Query: 73 TPSGGSSKKKNISVLDI----------GRPFSPSM-FEAVLKNFTPDVPNSISGRPRQED 121
++ +S LD G PF+P M ++A+ N D R QED
Sbjct: 452 I--MNRQEQDKLSALDASPPEPPTASDGEPFAPEMLYDAMKMNKRFDQ----MRRGLQED 505
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE----EDEWETVGPKNKSAVTRT 177
AQEFL + +D +H+E+L + G T + A +D W VG K ++A TR+
Sbjct: 506 AQEFLGYFLDTLHEEVLSAIDRHDELLGNRTRQAAQASNAPADDGWLEVGNKGRTATTRS 565
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
+ S ++ IFGG+L+SV++ G K S T++PFL L LDI +HTIEDAL S PE
Sbjct: 566 SATRESPITSIFGGRLRSVLRCPGQKDSVTLEPFLQLQLDIEEPGIHTIEDALIGLSQPE 625
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLV 296
L+ + +T VVTA K + ++ + IL+LHL RFSY S G K +K + + L L
Sbjct: 626 LLQDF---ATQQGQVVTASKQLFLEAIPPILVLHLKRFSYTSAGGILKSNKIIGYDLDLD 682
Query: 297 LGRDLLVTPSAEGR----KYELVATVTHHGRDPSKGHYTADARYFN-------------- 338
L +L PS + + +Y+L + V HHG+ GHYT R
Sbjct: 683 LPSAILA-PSLKMQTGIPRYQLTSVVYHHGKSALGGHYTVSVRPPAPFAAKPAGTTAAEV 741
Query: 339 -----DQWLHFDDASVTAIGTSKV----------------------LHDQAYVLFYKQ 369
QW H DD + + ++V + AY+LFY++
Sbjct: 742 SANEAQQWYHLDDTHIRMVPPAQVAVNREKEILRLSLPSASALGGTIEKSAYLLFYRR 799
>gi|242807459|ref|XP_002484960.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
gi|218715585|gb|EED15007.1| ubiquitin C-terminal hydrolase, putative [Talaromyces stipitatus
ATCC 10500]
Length = 861
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L C PF Q L + R K+ P + A + F+ +F
Sbjct: 400 LEPRGLVNTGNMCYMNSVLQILAFCVPFYQFLDHIGHRATHSFKSDVPLIDATIMFMREF 459
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S+ K+ + + G F P V++ P + G Q+DAQEF
Sbjct: 460 RVIDAAKSEDQLRMRLKHKELEEYGDAFIPEYVYDVIRQL-PRFRDMRRGH--QQDAQEF 516
Query: 126 LSFIMDQMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP-- 182
L F ++++H+E LQ + + A + S E D W VG K KSA+TR+ +
Sbjct: 517 LGFFLEELHEECAHALQSGAPQSSAAPSENSS--EADGWLEVGHKQKSAITRSSGDVEFE 574
Query: 183 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
S ++ IFGG+++S K GNK S T++P+ L LDI S V I DAL+ + PE + G
Sbjct: 575 SPITKIFGGKIRSEFKVPGNKNSVTLEPYQPLQLDIGSPEVSNIIDALKGLTKPETIHGD 634
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRD 300
+S G V A K V I+TL +LILHL RF Y S G+ K+ K V +PL+L + R+
Sbjct: 635 FSSPRGPK--VAATKQVFIETLPPVLILHLKRFQYDSVTHGTQKIWKKVGYPLELEIPRE 692
Query: 301 LLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAI 352
+ Y L+ + HHG++ S GHYT D R + +W+ DD + +
Sbjct: 693 VFPPHRRNAMAVHGGLPHYRLIGVIYHHGKNASGGHYTVDVRRQDGREWIRMDDTVIRRV 752
Query: 353 GTSKV 357
+ V
Sbjct: 753 RSEDV 757
>gi|346322680|gb|EGX92278.1| ubiquitin C-terminal hydrolase, putative [Cordyceps militaris CM01]
Length = 913
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 201/370 (54%), Gaps = 34/370 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ LM CSPF L ++ R + + P L A + F+ ++
Sbjct: 464 LEPRGLINTGNMCYMNSVLQVLMYCSPFYDFLDQISKRAVYSFNSETPLLDAMIMFMHEY 523
Query: 72 ----DTPSGGSSKK--KNISVLDIGRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDA 122
P+ +K + + G PF+P ++EA+ L F + R Q+DA
Sbjct: 524 KVLKSAPNNEQLRKLIRGEEIERYGEPFTPDFVYEAIRQLSRF------ASMRRGHQQDA 577
Query: 123 QEFLSFIMDQMHDELLKLQGE----STSINGANTALV--SLAEEDEWETVGPKNKSAVTR 176
+EFL F++ + DE + ++ + ++ A V S+ +W VG K + AVTR
Sbjct: 578 EEFLGFLLQSLDDECTLVMSNASQTASQTDSSDAASVGGSVDATGDWLEVGRKQRPAVTR 637
Query: 177 TQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S + ++ IFGG L+S + G K S T +P+ L LDI + + + DALR +
Sbjct: 638 SSGSNASTPVTKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGAPEIRNVVDALRGLTR 697
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQ 294
PE ++G S G +TA K V I+TL +LILHL RF + ++ G+TK+ K V +PL
Sbjct: 698 PERMQGDFNSPRGKD--ITATKQVFIETLPPVLILHLKRFQFDAEGGTTKIWKKVGYPLD 755
Query: 295 LVLGRDLLVTPS----AEGR--KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
L + R+ L + A+G +Y+L++ + HHG++ S GHYTAD R + +W+ DD
Sbjct: 756 LEIPREALSRQARQSMADGASPRYKLISVIYHHGKNASGGHYTADVRRQDGCEWMRLDDT 815
Query: 348 SVTAIGTSKV 357
+ + + +V
Sbjct: 816 VLRRLRSEEV 825
>gi|258569845|ref|XP_002543726.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237903996|gb|EEP78397.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 886
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 192/370 (51%), Gaps = 33/370 (8%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 418 PRGLVNTGNMCYMNSILQVLIFCVPFYDFLDRISRRAAHSFKSELPFLDAMIMFMREFRV 477
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
+S + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 478 IDSATSVEQLRLRLKQNELEQYGASFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFLG 534
Query: 128 FIMDQMHDELLKLQ------GESTSINGAN-TALVSLAEEDEWETVGPKNKSAVTRTQSF 180
F+ +++H+E L E+ S+N + T++ + + W VG K K AVTR+
Sbjct: 535 FLFEELHEECLHAMKSSATTSETASVNDVDATSMTDDSTTEGWLEVGHKQKPAVTRSAGH 594
Query: 181 LP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ S ++ IFGG+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 595 IAAESPITKIFGGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPET 654
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 296
+ G +SS G TA K V I++L +LILHL RF Y ++G+ K+ K V +PL+L
Sbjct: 655 MHGDFSSSRGTKA--TATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLELE 712
Query: 297 LG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 713 IPKEVFPPHRRNILAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWVRIDDT 772
Query: 348 SVTAIGTSKV 357
+ + + V
Sbjct: 773 VIRRVRSEDV 782
>gi|158296242|ref|XP_316682.4| AGAP006652-PA [Anopheles gambiae str. PEST]
gi|157016417|gb|EAA11019.5| AGAP006652-PA [Anopheles gambiae str. PEST]
Length = 2169
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/391 (31%), Positives = 197/391 (50%), Gaps = 43/391 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 68
++PRGLIN N C++N LQAL++C PF L++ +RT +P A P + A
Sbjct: 1685 MMPRGLINRSNYCYINTILQALIACPPFYHLMRTIRT--LPAAKNSKHPKPFIDAMCALA 1742
Query: 69 SDFDT------PSGGSSKKKN-------ISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 115
++F P + I + + PF P++ +L D+ I G
Sbjct: 1743 NEFSQLPIRSKPQQQQQRGGGDKGKKDDIPEIQVDTPFEPTVIYKMLNGIRSDI-FQIEG 1801
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKL-------QGESTSINGANTALVSLAEEDEWETVGP 168
R QEDA+EFL ++++++DE+++ QG N + + D+W +
Sbjct: 1802 R--QEDAEEFLGCVLNRLNDEMIEFIKFNKTDQGNLNGEEPTNGEVHGEEDADDWMVICK 1859
Query: 169 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 228
NK VTRT F S +SDIF G+L+S V+ G + +QPF L LDI E ++++
Sbjct: 1860 GNKGTVTRTTDFGRSPISDIFRGKLRSRVQRDGVPPTYNIQPFFTLPLDI--EKAASVKE 1917
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 288
AL + LEG S T V A + V ++ L +LILHL F Y G TK+ K+
Sbjct: 1918 ALEQLVGRDELEGVTCSKTKQE--VAAWQQVTLEELPVVLILHLKCFDYKMDGCTKILKT 1975
Query: 289 VRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLH 343
+ FP++L + L+ + SA+ ++Y+L A V H G++ SKGHY D + W+
Sbjct: 1976 LDFPIELKIDSKLMSSKGKSYSAKQKQYKLFAVVYHDGKEASKGHYITDVYHTGYASWIR 2035
Query: 344 FDDASVTAIGTSKVLHDQA----YVLFYKQV 370
+DD+ V + VL +A Y+L+Y+++
Sbjct: 2036 YDDSIVKPVPEYNVLRPRAPRVPYLLYYRRM 2066
>gi|442629286|ref|NP_001261228.1| CG32479, isoform B [Drosophila melanogaster]
gi|440215092|gb|AGB93923.1| CG32479, isoform B [Drosophila melanogaster]
Length = 797
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 387 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 441
Query: 67 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 442 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 498
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 499 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 556
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 557 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 614
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 615 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 672
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 673 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 732
Query: 345 DDASVTAIGTSKVLHDQA----YVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 733 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 761
>gi|307102558|gb|EFN50829.1| hypothetical protein CHLNCDRAFT_55534 [Chlorella variabilis]
Length = 922
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 138/420 (32%), Positives = 198/420 (47%), Gaps = 69/420 (16%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----------AGYPTLTAFV 65
PRGL N GNLCF+N+ LQAL+ S F QLL LR + P+ A F
Sbjct: 507 PRGLFNPGNLCFMNSILQALLGSSRFCQLLAALR-KAAPELDAAATPTLAALAELAAEFK 565
Query: 66 GFVSDFDTPSGGSSKK---------------KNISVLDIG-RPFSPSMFEAVLKNFTPDV 109
+ + GG++ + K +L +G RP P M V+ +F P
Sbjct: 566 PVEAPRERQGGGAAAEDGQQQGVGAAAAGAAKAAGLLMLGDRPLMPGMLMEVVNSFRPHG 625
Query: 110 -------------------------PNSISGRP---------RQEDAQEFLSFIMDQMHD 135
P S+ P QEDA +FL +++D+MH
Sbjct: 626 CGAGGGATSTCSIVLGPGKSNGSTGPMSLQASPCATIAAPRWEQEDAHDFLEYLVDRMHQ 685
Query: 136 ELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
E +L G S + A AEEDEW T + + ++ + +S +F G
Sbjct: 686 EWARLSGGGAALSATAASAAANAAKAAEEDEWLTRSGRRTTKRQPLKTDSETTVSGLFRG 745
Query: 192 QLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
S V QG+ S T QPF+ L L I ++V +++DAL L +A E++ GY+ T +
Sbjct: 746 TTLSTVTCQGHPPSETPQPFVSLSLHILPDSVKSVDDALDLLTATESISGYKPQDT--SA 803
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GR 310
A K V++Q L +L+L LMRF + K+ K V FP +L + R L + S E G
Sbjct: 804 PTEATKVVRLQRLPPLLVLFLMRFDPANL-HQKISKPVAFPPRLKMNRTWLASDSGERGA 862
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
+Y+LV+TVTHHG+ GHYTAD R WLHFDD V + +VL + Y+LFY++V
Sbjct: 863 EYDLVSTVTHHGKTIGSGHYTADVRQPCGAWLHFDDDRVDKVSQQQVLTSRPYLLFYQRV 922
>gi|428169103|gb|EKX38040.1| hypothetical protein GUITHDRAFT_165307 [Guillardia theta CCMP2712]
Length = 634
Score = 184 bits (468), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 179/379 (47%), Gaps = 47/379 (12%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF---- 71
PRG++N GNLCF+NA LQ+L+ C F QLL L IP+ TL++FV S+F
Sbjct: 220 PRGMVNMGNLCFMNAVLQSLIGCRAFFQLLHGLLNSHIPRE-LKTLSSFVSLASEFVELE 278
Query: 72 -------DTPSGGSSKKKNISV-----------LDIGRPFSPSMFEAVLKNFTPDVP-NS 112
D K+ S L P +P F ++ F P P
Sbjct: 279 TAPPPSQDVKDANKEAKETSSTDAAAAAVLVRSLKSSTPLNPGYFFDLVSTFAPTDPVRP 338
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGAN-----------TALVSLAE 159
G+ RQEDAQEFLSF+++ +HDE + + S NG N T + +
Sbjct: 339 GRGKARQEDAQEFLSFLLNCLHDEFVSFENRVLSADGNGPNGGSGEDGGSSTTGADASPD 398
Query: 160 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
+D+W+ VG K R + S +S IFGGQ ++ ++ KASA+++PFL ++LDI
Sbjct: 399 DDDWQEVGGHAKVTFVRKLNMETSPVSKIFGGQFRTTIRYSSTKASASLEPFLCINLDIA 458
Query: 220 SEAVH------TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
E+ H T+ + + + PE L+G A++ +I+ +L+LHL
Sbjct: 459 MESSHKDVKSVTLHEIISSYFKPEKLDGV----VNGCQEGKAQRHAQIEKGPDVLVLHLK 514
Query: 274 RFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTAD 333
RF + + K+ V +P L L + + + Y LVA V+HHG GHYT+
Sbjct: 515 RFRFDGASAHKILTRVSYPDTLSLEEYCVKGVGQDFQHYRLVAVVSHHGSKMHHGHYTSM 574
Query: 334 ARYFNDQWLHFDDASVTAI 352
R QW+ DD ++ +
Sbjct: 575 VRQPTGQWIRLDDHNLEIV 593
>gi|408387754|gb|EKJ67464.1| hypothetical protein FPSE_12383 [Fusarium pseudograminearum CS3096]
Length = 948
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 194/366 (53%), Gaps = 29/366 (7%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGLIN+GN+C++N+ LQ LM C PF L ++ R + K+ P + A + F+ +F
Sbjct: 505 LEPRGLINTGNMCYMNSVLQVLMFCLPFYDFLNQISKRAVHSFKSDTPLIDAMIMFMHEF 564
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 123
T + + KN + G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 565 KTIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 619
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
EFL F++ + DE + T + +A D+W VG K KSAV+R+
Sbjct: 620 EFLGFLLQSLDDECTTVLKNFTPDEAEHQPSAGSDAGGADDWLEVGRKQKSAVSRSSGSN 679
Query: 182 PSALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S+ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+
Sbjct: 680 SSSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQ 739
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 298
G S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 740 GDFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 797
Query: 299 RDLLV-----TPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTA 351
R+ L T EG KY+L++ V HHG++ S GHYT D R +W+ DD ++
Sbjct: 798 REALSRQKRQTLGEEGMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTAIRR 857
Query: 352 IGTSKV 357
+ + V
Sbjct: 858 VRSEDV 863
>gi|315044965|ref|XP_003171858.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
118893]
gi|311344201|gb|EFR03404.1| ubiquitin carboxyl-terminal hydrolase 10 [Arthroderma gypseum CBS
118893]
Length = 926
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 440 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 499
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 500 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 556
Query: 126 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 177
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 557 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDSQSIADDSTGDGWLEVGHKQKASVTRS 616
Query: 178 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 617 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 676
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 677 PETMHGDFQSSRGPK--VNATKQVFIEKLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 734
Query: 294 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L + R+ L + KY L+ + HHG+ S GHYT + R + +W+ F
Sbjct: 735 ELEIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRF 794
Query: 345 DDASVTAIGTSKV 357
DD + + + +V
Sbjct: 795 DDTYIRRVRSEEV 807
>gi|119196183|ref|XP_001248695.1| hypothetical protein CIMG_02466 [Coccidioides immitis RS]
Length = 893
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 194/371 (52%), Gaps = 34/371 (9%)
Query: 16 PRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFD 72
PRGL+N+GN+C++N+ LQ L+ C PF L + R K+ P L A + F+ +F
Sbjct: 423 PRGLVNTGNMCYMNSQVLQVLVFCVPFYDFLDRVSRRAAHSFKSELPLLDAMIMFMREFR 482
Query: 73 TPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
SS + K + G F P V+++ P + G Q+DAQEFL
Sbjct: 483 VIGSASSVEQLRQRLKQTELEQYGSSFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 539
Query: 127 SFIMDQMHDELLKLQGESTSINGANTA----LVSLAEE---DEWETVGPKNKSAVTRTQS 179
F+ +++H+E L S+++ A +A VS+ ++ + W VG K K+AVTR+
Sbjct: 540 GFLFEELHEECLHAIKSSSALPEAASASDVDAVSMTDDSAGEGWLEVGHKQKAAVTRSSG 599
Query: 180 FLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
+ S ++ IFGG L+S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 600 HIASESPITRIFGGNLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTRPE 659
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQL 295
+ G +SS G V A K V I++L +LILHL RF Y S +G+ K+ K + +PL+L
Sbjct: 660 TMHGDFSSSRGTK--VNATKQVFIESLPPVLILHLKRFHYDSVTKGTQKIWKKIGYPLEL 717
Query: 296 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+ R++L KY L + HHG++ S GHYT + R + +W+ DD
Sbjct: 718 EIPKEVFAPHRRNMLAAQGGGLPKYRLTGVIYHHGKNASGGHYTVEIRRQDGREWIRIDD 777
Query: 347 ASVTAIGTSKV 357
+ + + V
Sbjct: 778 TVIRRVRSEDV 788
>gi|327287256|ref|XP_003228345.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like, partial
[Anolis carolinensis]
Length = 334
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 173/309 (55%), Gaps = 36/309 (11%)
Query: 90 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GE 143
G F P+ +L + +S+S + RQEDA+E+L FI++ +H+E+L L+ E
Sbjct: 31 GAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLGFILNGLHEEMLILKKLLSPHSE 86
Query: 144 STSI-NGANTALVSLAEE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++ NG T V+ EE DEWE VGP+NKS+VTR F+ + ++DIFGG +
Sbjct: 87 KLAVSNGPETPSVNEEEEQEEQGEGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHI 146
Query: 194 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 253
+SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T + V
Sbjct: 147 RSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---V 203
Query: 254 TAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG--- 309
+ V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P +
Sbjct: 204 EISRRVTLEELPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIF 262
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQ 361
R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 263 KGQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQAVKVITQYQVVKPSAERT 322
Query: 362 AYVLFYKQV 370
AY+L+Y++V
Sbjct: 323 AYLLYYRRV 331
>gi|410984097|ref|XP_003998368.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10 [Felis catus]
Length = 1051
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 188/335 (56%), Gaps = 36/335 (10%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 516 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 571
Query: 61 LTAFVGFVSDF---DTPSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 572 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 627
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG-------ESTSINGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ + T NG + V E E
Sbjct: 628 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNQKLTVSNGPRSPSVHEDEQDEPGEGSE 687
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP++K++VTR F+ + ++ IFGG ++SVV Q ++ SAT+QPF L LDI S
Sbjct: 688 DEWEQVGPRSKTSVTRQAEFVQTPITGIFGGHIRSVVYQQSSRESATLQPFFTLQLDIQS 747
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 748 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 804
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
G KL KSV +P+ L + ++LL +P + + ++
Sbjct: 805 GGCQKLVKSVEYPVDLEISKELL-SPGVKNKNFKC 838
>gi|194748629|ref|XP_001956747.1| GF24416 [Drosophila ananassae]
gi|190624029|gb|EDV39553.1| GF24416 [Drosophila ananassae]
Length = 1508
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 131/392 (33%), Positives = 201/392 (51%), Gaps = 53/392 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY-------PTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157
Query: 67 FVSDFDT-PSG----------GSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPN 111
F+S+F + PSG GS K S L F P+ + K +
Sbjct: 1158 FMSNFSSLPSGLRLRLNTLNKGSQNKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLK----LQGESTSINGANTALVSLAEE--DEWET 165
+ G RQEDA+EFL +++++++DE+L+ + S NG + S E+ D W+
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPSAQQNGQDQ---SEPEDGGDVWQM 1269
Query: 166 V-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 224
+ +NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E
Sbjct: 1270 ICNNRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAA 1327
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 284
++++AL + + LEG S T V A + + ++ L +LILHL F Y S G TK
Sbjct: 1328 SVKEALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTK 1385
Query: 285 LHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQW 341
+ K V FP++L + +L + + + R Y L A V H G++ SKGHY D + W
Sbjct: 1386 ILKKVEFPVELKIDAKILGSKKTAQKQRAYRLFAVVYHDGKEASKGHYITDVFHSGYSSW 1445
Query: 342 LHFDDASVTAIGTSKVLHDQ----AYVLFYKQ 369
L +DD+SV + VL Y+L+Y++
Sbjct: 1446 LRYDDSSVKPVSEKNVLQPHTPRVPYLLYYRR 1477
>gi|327295689|ref|XP_003232539.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
gi|326464850|gb|EGD90303.1| ubiquitin C-terminal hydrolase [Trichophyton rubrum CBS 118892]
Length = 858
Score = 184 bits (466), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 123/373 (32%), Positives = 196/373 (52%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 431
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 432 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 488
Query: 126 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 177
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 489 LGFLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRS 548
Query: 178 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 549 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 608
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 609 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 666
Query: 294 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L + R+ L + KY L+ + HHG+ S GHYT + R + +W+ F
Sbjct: 667 ELEIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRF 726
Query: 345 DDASVTAIGTSKV 357
DD + + + +V
Sbjct: 727 DDTYIRRVRSEEV 739
>gi|443920841|gb|ELU40673.1| ubiquitin-specific protease [Rhizoctonia solani AG-1 IA]
Length = 1056
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/409 (33%), Positives = 207/409 (50%), Gaps = 60/409 (14%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTL-TAFVGFVSDFD 72
PRGLINSGN+CF N +QAL+ +PFV+L + L +P +G +L A + F+ +F
Sbjct: 647 PRGLINSGNMCFANVVMQALVYSAPFVRLFETL-AHLVPGSLSGKTSLYEATILFLREFT 705
Query: 73 TP--------------SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISG 115
SG S+ PF P + A +K S
Sbjct: 706 PEPESPPPAAPKAKSRSGASTPMPPEQTRQQAWNENPFFPELLYAAMKQNKRFDSMQFSQ 765
Query: 116 RPRQEDAQEFLSFIMDQMHDELL----KLQGESTS-----INGA--------NTALVSLA 158
R QEDA+EFL F +D +H+ELL ++Q E+ NG+ NT V
Sbjct: 766 RGHQEDAEEFLGFFLDTLHEELLSILSRVQTETAPEGTAWTNGSISRTPGVENTREVQRP 825
Query: 159 -----EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFL 212
++ +W VG KNK A+TRT SA++ IFGG+L+SV+ G +K S T++P+
Sbjct: 826 VSPDNKDGDWMEVGKKNKPAITRTTRATESAITRIFGGKLRSVLSIPGSSKDSVTLEPYQ 885
Query: 213 LLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHL 272
L LDI S+ + TIEDAL+ + PE + + S G+V AKK V +++L +LILHL
Sbjct: 886 PLQLDIQSDHIRTIEDALKHITVPEIVSMH---SEARGGMVDAKKQVTLESLPPLLILHL 942
Query: 273 MRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGH 329
R Y ++G K K + + L + R +V+P+ + KY+L V HHG+ + GH
Sbjct: 943 KRLVYDAKGIQKNSKVIEYSTTLEI-RPEIVSPTRRTKQSIKYQLYGVVYHHGKHATGGH 1001
Query: 330 YTADA-RYFNDQWLHFDDASVTAIGTSKVL-HDQ-------AYVLFYKQ 369
YT D R + +W+ DD + + V H++ AY+LFY++
Sbjct: 1002 YTIDVLRQDHSEWVRIDDTHIEPVTEKDVTAHEKHAKADKTAYLLFYRR 1050
>gi|66820366|ref|XP_643807.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
gi|74893995|sp|O96612.1|UBPB_DICDI RecName: Full=Ubiquitin hydrolase B
gi|4028549|gb|AAC97115.1| ubiquitin hydrolase B [Dictyostelium discoideum]
gi|60471837|gb|EAL69791.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
Length = 451
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 156/269 (57%), Gaps = 18/269 (6%)
Query: 111 NSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWE 164
NS+ Q+DAQEFL F++D +H+E L L E +T++V +D WE
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIV----DDNWE 246
Query: 165 TVGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
VG K K+A+ T +Q LP + +S IF G L+S G+K S TV+PF LHLDI E
Sbjct: 247 VVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEE 306
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 282
++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S
Sbjct: 307 INSLEDALKFFMKPEIIEGY-TCSTKKIE-ISASKSWSFESLPRILIVHFKRFAFESDTS 364
Query: 283 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QW 341
KL K +RFP QL L + +KY L + V+HHGR S+GHYT D QW
Sbjct: 365 KKLDKLIRFPTQLSLST---ASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQW 421
Query: 342 LHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
+ +DD++ T + VL+ +AY+L Y+ V
Sbjct: 422 IRYDDSTFTEVKEQDVLNREAYLLLYQLV 450
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-YPTLTAFVGFVSDF 71
RGLIN+ N CF+N LQ+L C F+++++ L D+ G YPTL +F F +++
Sbjct: 19 RGLINTSNTCFMNVILQSLTGCQLFLRVIKNL--SDLEDLGKYPTLHSFNQFYTEY 72
>gi|328768046|gb|EGF78093.1| hypothetical protein BATDEDRAFT_35737 [Batrachochytrium
dendrobatidis JAM81]
Length = 659
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 199/396 (50%), Gaps = 49/396 (12%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTLTAFVGFVS 69
K + PRGL N GN+CF+NA LQ L+ C PF L+ + K+ P + + + ++
Sbjct: 274 KLIRPRGLKNGGNMCFMNAILQPLIHCPPFYNFLKMYENIFKHSFKSTTPLIDSMLQLLN 333
Query: 70 DFDTPSGGSSKKKNISVLDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+F ++ N L RPF VL+ + S + RQEDA+EF
Sbjct: 334 EF------KEEEPNTIPLPPATKDYRPFVGEYVYDVLRKSK----HIESQKGRQEDAEEF 383
Query: 126 LSFIMDQMHDELLKLQG------ESTSINGANTALVSLAEE------------------D 161
L F+++ +H+ELL++ ES S++ + +A + D
Sbjct: 384 LGFLLEGLHEELLRVDNAQEKARESRSMDSHRLSNGMIAPQTTSPTRGAIVDGECTITAD 443
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
W VG K K TRT +A++ IFGGQ++S VK+ G+K S T +PF L LDI S
Sbjct: 444 TWMEVGKKKKVQPTRTVQVKTTAIARIFGGQMRSAVKSFGSKDSTTSEPFQALQLDITSP 503
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
V+TIEDALR + PE +EGY TSS A K ++ L +LILHL RF Y S G
Sbjct: 504 TVNTIEDALRELTLPEVIEGY-TSSEHPDVSSNATKQTFLEVLPAVLILHLKRFVYDSVG 562
Query: 282 ST-KLHKSVRFPLQLVLGRDLL---VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
T K+ K + + +L + D+L V + KY L A V HHG+ + GHYT D
Sbjct: 563 GTLKVSKHIAYSTELKISTDILAPSVRATQNNTKYHLFAIVNHHGKRAAGGHYTCDVLRQ 622
Query: 338 NDQWLHFDDASVTAIG----TSKVLHDQAYVLFYKQ 369
N+ WLH DD+ ++ TS+ Q Y+LF+ +
Sbjct: 623 NESWLHIDDSDISMTTAKAVTSERRDGQPYMLFFAK 658
>gi|195490238|ref|XP_002093054.1| GE21106 [Drosophila yakuba]
gi|194179155|gb|EDW92766.1| GE21106 [Drosophila yakuba]
Length = 1513
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 197/389 (50%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY-------PTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1103 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1157
Query: 67 FVSDFDT-PS-----------GGSSKKKNISV---LDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PS G SK K+ V L F P+ + K +
Sbjct: 1158 FMTNFSSLPSGLRLRLNNLNKGAQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1214
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1215 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1272
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1273 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1330
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1331 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1388
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1389 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1448
Query: 345 DDASVTAIGTSKVLHDQ----AYVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 1449 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1477
>gi|195428110|ref|XP_002062117.1| GK17362 [Drosophila willistoni]
gi|194158202|gb|EDW73103.1| GK17362 [Drosophila willistoni]
Length = 1652
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 197/395 (49%), Gaps = 52/395 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1231 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1285
Query: 67 FVSDFDT-PSG-------------GSSKKKNISV----LDIGRPFSPSMFEAVLKNFTPD 108
F+++F PSG GS K L F P+ + K +
Sbjct: 1286 FMTNFTALPSGLRLRLNNNLNNNKGSQNKGKDEFAGVDLQCDMAFEPT---EIYKLWNDS 1342
Query: 109 VPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-----W 163
+ G RQEDA+EFL +++++++DE+L++ N A+E E W
Sbjct: 1343 REEHVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPNPQQNGQQEQADEPEDDGDVW 1400
Query: 164 ETV-GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
+ + +NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E
Sbjct: 1401 QMICNNRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EK 1458
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 282
++++AL + + LEG S T V A + + ++ L +LILHL F Y S G
Sbjct: 1459 AASVKEALEILIGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPIVLILHLKYFDYRSDGC 1516
Query: 283 TKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 340
TK+ K V FP++L + +L + + + R Y L A V H G++ SKGHY D + Q
Sbjct: 1517 TKILKKVEFPVELKIDAKILGSKKTAQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYQ 1576
Query: 341 -WLHFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
WL +DD+SV I VL Y+L+Y++
Sbjct: 1577 SWLRYDDSSVKPISEKHVLQPHTPRVPYLLYYRRC 1611
>gi|195586799|ref|XP_002083155.1| GD13581 [Drosophila simulans]
gi|194195164|gb|EDX08740.1| GD13581 [Drosophila simulans]
Length = 1051
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/389 (33%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A
Sbjct: 641 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAICL 695
Query: 67 FVSDFDT-PS-----------GGSSKKKNISV---LDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PS G SK K+ V L F P+ + K +
Sbjct: 696 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 752
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 753 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 810
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 811 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 868
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 869 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 926
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 927 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 986
Query: 345 DDASVTAIGTSKVLHDQA----YVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 987 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1015
>gi|195175018|ref|XP_002028260.1| GL16888 [Drosophila persimilis]
gi|194117392|gb|EDW39435.1| GL16888 [Drosophila persimilis]
Length = 1195
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 49/390 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY-------PTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 786 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 840
Query: 67 FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG +K K+ + L F P+ + K +
Sbjct: 841 FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 897
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + S + W+ +
Sbjct: 898 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 955
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 956 NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1013
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + +EG S T V A K + ++ L +LILHL F Y S G TK+ K
Sbjct: 1014 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1071
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLH 343
V FP +L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL
Sbjct: 1072 KVEFPAELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLR 1130
Query: 344 FDDASVTAIGTSKVLHDQA----YVLFYKQ 369
+DD+SV I +VL A Y+L+Y++
Sbjct: 1131 YDDSSVKPISEKQVLQPHAPRVPYLLYYRR 1160
>gi|198465534|ref|XP_001353673.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
gi|198150201|gb|EAL31187.2| GA16935 [Drosophila pseudoobscura pseudoobscura]
Length = 1717
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 201/390 (51%), Gaps = 49/390 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY-------PTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1308 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSDVKTPTVNAMMS 1362
Query: 67 FVSDFDT-PSG-----------GSSKKKNI---SVLDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG +K K+ + L F P+ + K +
Sbjct: 1363 FMTNFSSLPSGLRLRLNTLNKAAQNKGKDEFAGTDLQCDIAFEPT---DIYKLWNDSREE 1419
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + S + W+ +
Sbjct: 1420 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIAKPVPQQNGQEQPESEDGGEVWQKICN 1477
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1478 NRNKGSVTRQTDFGRTPISDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1535
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + +EG S T V A K + ++ L +LILHL F Y S G TK+ K
Sbjct: 1536 EALEILVGRDQIEGVTGSKTKQE--VVAWKQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1593
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARY--FNDQWLH 343
V FP +L + +L + S + R Y L A V H G++ SKGHY D + +N+ WL
Sbjct: 1594 KVEFPAELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYNN-WLR 1652
Query: 344 FDDASVTAIGTSKVLHDQA----YVLFYKQ 369
+DD+SV I +VL A Y+L+Y++
Sbjct: 1653 YDDSSVKPISEKQVLQPHAPRVPYLLYYRR 1682
>gi|194864707|ref|XP_001971067.1| GG14744 [Drosophila erecta]
gi|190652850|gb|EDV50093.1| GG14744 [Drosophila erecta]
Length = 1541
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 196/389 (50%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1131 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1185
Query: 67 FVSDFDT-PSGGSSKKKNI--------------SVLDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG + N+ S L F P+ + K +
Sbjct: 1186 FMTNFSSLPSGLRLRLNNLNKGPQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1242
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1243 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1300
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1301 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1358
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1359 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1416
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1417 KVEFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1476
Query: 345 DDASVTAIGTSKVLHDQ----AYVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 1477 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1505
>gi|24654914|ref|NP_728554.1| CG32479, isoform A [Drosophila melanogaster]
gi|442629288|ref|NP_001261229.1| CG32479, isoform C [Drosophila melanogaster]
gi|21483414|gb|AAM52682.1| LD28815p [Drosophila melanogaster]
gi|23092724|gb|AAF47426.2| CG32479, isoform A [Drosophila melanogaster]
gi|220947592|gb|ACL86339.1| CG32479-PA [synthetic construct]
gi|440215093|gb|AGB93924.1| CG32479, isoform C [Drosophila melanogaster]
Length = 1517
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 199/389 (51%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1107 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1161
Query: 67 FVSDFDT-PSG----------GS-SKKKNISV---LDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG GS SK K+ V L F P+ + K +
Sbjct: 1162 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDDFVGSDLQCDMAFEPT---EIYKLWNDSREE 1218
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1219 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1276
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1277 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1334
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1335 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1392
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1393 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1452
Query: 345 DDASVTAIGTSKVLHDQ----AYVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 1453 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1481
>gi|322694571|gb|EFY86397.1| Ubiquitin carboxyl-terminal hydrolase family protein [Metarhizium
acridum CQMa 102]
Length = 833
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 194/368 (52%), Gaps = 33/368 (8%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDFDT 73
PRGL+N+GN+C++N+ LQ LM C+PF L +L R K+ P + A V F+ +F
Sbjct: 385 PRGLVNTGNMCYMNSVLQVLMFCAPFYDFLDQLSKRAAHSFKSETPLVDAMVMFLQEFKV 444
Query: 74 PSGGSSKKKNISVLD------IGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQEF 125
+ SS K+ L G PF+P ++EA+ + +P S R Q+DA+EF
Sbjct: 445 LASASSSKQLRGTLKSQVFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEEF 499
Query: 126 LSFIMDQMHDELL-----KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRTQS 179
L F++ + DE GE+ + N + + A +W VG K K+AV+R+
Sbjct: 500 LGFLLQSLDDECTLAMNKSFPGETEQVQNEKSIDHEAAAPSGDWLEVGRKQKAAVSRSSG 559
Query: 180 FLPS-ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
S ++ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE
Sbjct: 560 SNTSSPITKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPER 619
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLV 296
L+G S G V A K V I++L +LILHL RF + + G+ K+ K + +PL+L
Sbjct: 620 LQGDFNSPRGKD--VLATKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLELE 677
Query: 297 LGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASV 349
+ R++L + +Y+L++ V HHG++ S GHYT D R + Q W+ DD +
Sbjct: 678 IPREVLSRQRRQNIGDGPLPRYKLISVVYHHGKNASGGHYTVDVRRQDGQEWIRLDDTLL 737
Query: 350 TAIGTSKV 357
I + +V
Sbjct: 738 QRIRSEEV 745
>gi|195336431|ref|XP_002034839.1| GM14362 [Drosophila sechellia]
gi|194127932|gb|EDW49975.1| GM14362 [Drosophila sechellia]
Length = 1427
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 199/389 (51%), Gaps = 47/389 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVG 66
L PRGL N N C++N+ LQAL+ CSPF LL R IPK PT+ A +
Sbjct: 1017 LRPRGLTNRSNYCYINSILQALLGCSPFYNLL-----RSIPKQAAVLSEVKTPTVNAMMS 1071
Query: 67 FVSDFDT-PSG----------GS-SKKKNISV---LDIGRPFSPSMFEAVLKNFTPDVPN 111
F+++F + PSG GS SK K+ V L F P+ + K +
Sbjct: 1072 FMTNFSSLPSGLRLRLNNLNKGSQSKGKDEFVGSDLQCDMAFEPT---EIYKLWNDSREE 1128
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDEWETV-G 167
+ G RQEDA+EFL +++++++DE+L KL + T D W+ +
Sbjct: 1129 HVEG--RQEDAEEFLGYVLNKLNDEMLEVIKLIDKPTPQQNGQEPAEPEDGGDVWQMICN 1186
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
+NK +VTR F + +SDIF G+L+S ++ +G ++ +QPF L L+I E +++
Sbjct: 1187 NRNKGSVTRQTDFGRTPVSDIFRGELRSRLQREGEHSTDVIQPFFTLQLNI--EKAASVK 1244
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
+AL + + LEG S T V A + + ++ L +LILHL F Y S G TK+ K
Sbjct: 1245 EALEILVGRDQLEGVTGSKTKQE--VVAWQQMTLEKLPVVLILHLKYFDYRSDGCTKILK 1302
Query: 288 SVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHF 344
V FP++L + +L + S + R Y L A V H G++ SKGHY D + WL +
Sbjct: 1303 KVDFPVELKIDAKILGSKKTSQKQRAYRLFAVVYHDGKEASKGHYITDVFHTGYSSWLRY 1362
Query: 345 DDASVTAIGTSKVLHDQ----AYVLFYKQ 369
DD+SV + VL Y+L+Y++
Sbjct: 1363 DDSSVKPVSEKHVLQPHTPRVPYLLYYRR 1391
>gi|340514126|gb|EGR44394.1| predicted protein [Trichoderma reesei QM6a]
Length = 791
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 192/375 (51%), Gaps = 33/375 (8%)
Query: 8 VKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFV 65
+ V L PRGLIN+GN+C++N+ LQ L+SC PF L ++ + K+ P + A +
Sbjct: 338 IDKVDFLEPRGLINTGNMCYMNSVLQVLVSCVPFYDFLDQVGKKAAHSFKSETPLVDALI 397
Query: 66 GFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 118
F+ +F K SV + R FE + FTP+ V ++I PR
Sbjct: 398 MFMREFKV------LKSAPSVEQLNRILKSEDFERYGEPFTPEFVYDAIRHLPRFASMRR 451
Query: 119 --QEDAQEFLSFIMDQMHDE----LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKS 172
Q+DA+EFL F++ + DE + L + + +N + S D+W VG K ++
Sbjct: 452 GHQQDAEEFLGFLLQSLDDECTHVMRDLPMGNEEVPSSNASTGSGVASDDWLEVGRKQRA 511
Query: 173 AVTRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
AV+R S ++ IFGG L+S + G K S T + + L LDI S +H + DALR
Sbjct: 512 AVSRLSGHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDIHNVVDALR 571
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSV 289
+ PE L+G S G V A K V I++L +LILHL RF + ++ G+ K+ K +
Sbjct: 572 GLTRPERLQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGRGTVKIWKKI 629
Query: 290 RFPLQLVLGRDLLVT------PSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWL 342
+PL+L + R+ L +A +Y L++ V HHG++ S GHYT D R + +W+
Sbjct: 630 GYPLELEIPREALSRQRRQNLDNASMPRYRLISVVYHHGKNASGGHYTVDVRRQDGREWI 689
Query: 343 HFDDASVTAIGTSKV 357
DD + I V
Sbjct: 690 RLDDTVIRRIRPEDV 704
>gi|380482368|emb|CCF41279.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum higginsianum]
Length = 959
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 121/381 (31%), Positives = 195/381 (51%), Gaps = 40/381 (10%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTL 61
++ P K V+ + PRGLIN+GN+C++N+ LQ L+ C+PF L ++ R + K+ P +
Sbjct: 501 VSNPAK-VQFIEPRGLINTGNMCYMNSVLQVLLFCAPFYNFLDQVSKRAVHKFKSDTPVI 559
Query: 62 TAFVGFVSDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 115
A + F+ +F D+ K K+ + G F P E V K P +
Sbjct: 560 DAMIMFMREFRVIDATDSVEKLRRKLKSEQLEQYGESFIP---EFVYKAIQPLPAFASMR 616
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKL---------QGESTSINGANTALVSLAEEDEWETV 166
R Q+DAQEFL I++ + +E ++ E+ + A +A+ S + W V
Sbjct: 617 RGHQQDAQEFLGLILNAIDEECAQVMSAGGLANGSAETRPTSSAASAVESTDGAEGWFEV 676
Query: 167 GPKNKSAVTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
G + ++ TR+ + + ++ +F GQ +S ++ G K S T +PF L LDI + +H
Sbjct: 677 GSRQRAVETRSSGASSTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPYIHN 736
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 285
+ DA++ + PE L+ G+A +T K I+TL ILILHL RF + ++G+TK+
Sbjct: 737 VVDAIKGLTVPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKI 787
Query: 286 HKSVRFPLQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
K V +PL L L R+ LV A KY L+ V HHG+ + GHYT D R
Sbjct: 788 GKKVGYPLDLQLPVEVLSKRRRNALVAEGAPMPKYRLIGVVYHHGKQANGGHYTVDVRRQ 847
Query: 338 ND-QWLHFDDASVTAIGTSKV 357
+D +W+ DD + + + V
Sbjct: 848 DDNEWIRLDDTVIRRVRSEDV 868
>gi|326483341|gb|EGE07351.1| hypothetical protein TEQG_06257 [Trichophyton equinum CBS 127.97]
Length = 803
Score = 181 bits (458), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 122/373 (32%), Positives = 195/373 (52%), Gaps = 34/373 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF + L ++ R K+ P + A + F+ +F
Sbjct: 317 LEPRGLVNTGNMCYMNSILQVLIFCVPFYEFLDQIGRRAAHSFKSDSPLVDAMIMFLREF 376
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
SS + K + + G F P V+++ P + G Q+DAQEF
Sbjct: 377 RVIDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEF 433
Query: 126 LSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT 177
L F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 434 LGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVGHKQKASVTRS 493
Query: 178 --QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ +
Sbjct: 494 SGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTK 553
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPL 293
PE + G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL
Sbjct: 554 PETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPL 611
Query: 294 QLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
+L + R+ L + KY L+ + HHG+ S G YT + R + +W+ F
Sbjct: 612 ELEIPKEVFPPHRRNALSVQNGSLPKYRLIGVIYHHGKSASGGQYTVEVRRQDGREWVRF 671
Query: 345 DDASVTAIGTSKV 357
DD + + + +V
Sbjct: 672 DDTYIRRVRSEEV 684
>gi|322710343|gb|EFZ01918.1| ubiquitin hydrolase, putative [Metarhizium anisopliae ARSEF 23]
Length = 809
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 126/370 (34%), Positives = 196/370 (52%), Gaps = 33/370 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ LM C+PF L ++ R K+ P + A V F+ +F
Sbjct: 359 IEPRGLVNTGNMCYMNSVLQVLMFCAPFYDFLDQVSKRAAHSFKSETPLVDAMVMFLQEF 418
Query: 72 DTPSGGSSKKKNISVLD------IGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQ 123
+ SS K+ S L G PF+P ++EA+ + +P S R Q+DA+
Sbjct: 419 KVLASASSSKQLRSTLKSQVFELYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAE 473
Query: 124 EFLSFIMDQMHDELL-----KLQGESTSI-NGANTALVSLAEEDEWETVGPKNKSAVTRT 177
EFL F++ + DE GE+ + + + + A +W VG K K+AV+R+
Sbjct: 474 EFLGFLLQSLDDECTLVMNKSFPGETEQVPDEKSIDHEAAAPSGDWLEVGRKQKAAVSRS 533
Query: 178 QSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
S+ ++ IFGG L+S + G K S T +P+ L LDI S V + DALR + P
Sbjct: 534 SGSNTSSPITKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSPDVRNVVDALRGLTRP 593
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQ 294
E L+G S G V A K V I++L +LILHL RF + + G+ K+ K + +PL+
Sbjct: 594 ERLQGDFNSPRGKD--VLATKQVFIESLPPVLILHLKRFQFDATANGTIKIWKKIGYPLE 651
Query: 295 LVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDA 347
L + R+ L + +Y+L++ V HHG++ S GHYT D R + Q W+ DD
Sbjct: 652 LEIPREALSRQRRQNIGDGPLPRYKLISVVYHHGKNASGGHYTVDVRRQDGQEWIRMDDT 711
Query: 348 SVTAIGTSKV 357
+ I + +V
Sbjct: 712 VLQRIRSEEV 721
>gi|310796856|gb|EFQ32317.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 947
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 193/381 (50%), Gaps = 40/381 (10%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTL 61
+ P K V+ + PRGLIN+GN+C++N+ LQ L+ C+PF L ++ R + K+ P +
Sbjct: 489 VGNPAK-VQFIEPRGLINTGNMCYMNSVLQVLLFCAPFYNFLDQVSKRAVHKFKSDTPVI 547
Query: 62 TAFVGFVSDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG 115
A + F+ +F D+ K K+ + G F P E V K P +
Sbjct: 548 DAMIMFMREFRVIDATDSVEKLRRKLKSEQLEQYGESFIP---EFVYKAIQPLPAFASMR 604
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQGESTSING-----ANTALVSLAEE----DEWETV 166
R Q+DAQEFL I++ + +E ++ NG ++ S+ E D W V
Sbjct: 605 RGHQQDAQEFLGLILNAIDEECAQVMSAGGVSNGLAEARPTSSAASVVESNDGADGWFEV 664
Query: 167 GPKNKSAVTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
G + ++ TR+ + + ++ +F GQ +S ++ G K S T +PF L LDI + +H
Sbjct: 665 GSRQRAVETRSSGASSTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPHIHN 724
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 285
+ DA++ + PE L+ G+A +T K I+TL ILILHL RF + ++G+TK+
Sbjct: 725 VVDAIKGLTVPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKI 775
Query: 286 HKSVRFPLQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
K V +PL L L R+ LV A KY L+ V HHG+ + GHYT D R
Sbjct: 776 AKKVGYPLDLQLPAEVLSKRRRNALVAEGAPMPKYRLIGVVYHHGKQANGGHYTVDVRRQ 835
Query: 338 ND-QWLHFDDASVTAIGTSKV 357
+D +W+ DD + + + V
Sbjct: 836 DDNEWIRLDDTVIRRVRSEDV 856
>gi|407918479|gb|EKG11750.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 878
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 189/370 (51%), Gaps = 35/370 (9%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
+ PRGL+N+GN+C++N+ LQ L+ C PF L ++ R K+ P L A + F+ +F
Sbjct: 414 IEPRGLVNTGNMCYMNSILQTLVFCIPFYNFLDQVGKRAAYSFKSETPLLDAMIMFMREF 473
Query: 72 DTPSGGSSKK------KNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDAQE 124
S++ K+ + G F P V+K +P S R Q+DA+E
Sbjct: 474 PIIDSADSEEQLRLRLKDTELEKYGDAFIPEFVYDVIKR----LPRFSHMRRGHQQDAEE 529
Query: 125 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEEDE---WETVGPKNKSAVTRTQ 178
FL FI+ +HDE ++K S S T+ S E D+ W VGPK K +VTR+
Sbjct: 530 FLGFILAGLHDECGHIMKSAPASASTTTEPTS-PSGTEPDQAEGWLEVGPKQKPSVTRSS 588
Query: 179 SFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGG +S ++A G K S T +PF L LDI + V+ I DA++ + P
Sbjct: 589 GTVGSETPITKIFGGMFRSEIRAPGEKPSITKEPFQPLQLDIGAPHVNNIVDAMKALTRP 648
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQL 295
E ++ Y++S N + A K V I TL +LILHL RF Y + G T K+ K V +PL L
Sbjct: 649 EPVD-YKSSRGPN---IMAMKQVFIDTLPSVLILHLKRFQYDNTGGTQKIWKKVGYPLDL 704
Query: 296 VLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDA 347
L +++ G KY L + HHG+ S GHYT D R + +W+ DD
Sbjct: 705 ELPKEVFPQHKRPGLSVKGGEPKYRLTGVIYHHGKTASGGHYTVDVRRQDGREWIRMDDT 764
Query: 348 SVTAIGTSKV 357
+ I + V
Sbjct: 765 ILRRIRSEDV 774
>gi|449547151|gb|EMD38119.1| hypothetical protein CERSUDRAFT_113250 [Ceriporiopsis subvermispora
B]
Length = 872
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/396 (34%), Positives = 196/396 (49%), Gaps = 52/396 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--------PTLTAFV 65
L PRGL+N+GN+CF NA LQ L+ C PF +L ELR AG P + A
Sbjct: 484 LRPRGLVNTGNMCFANAVLQILVYCPPFHKLFSELRKYLSSPAGAQKDRSQATPLVDATT 543
Query: 66 GFVSDF--------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKN---FTPDVPNSIS 114
F+ +F ++ G ++++ LD F P+ V+K F N I
Sbjct: 544 QFLKEFLPEVPDPAESRGKGKEREEDFDELDS---FIPTYVYDVMKEKKRFA----NMIG 596
Query: 115 GRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSA 173
G QEDA+EFL F +D + +ELL L S S A++DE W VG KN++
Sbjct: 597 GH--QEDAEEFLGFYLDTLEEELLSL-ANSLSAGAPAAPEREEAQQDEGWHEVGKKNRAV 653
Query: 174 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
+TRT S ++ IFGG+ +S + A + S V+ + L LDI E V TI+DALR
Sbjct: 654 LTRTVKSTESPITRIFGGKFRSTLSAPRQRESVIVEDWRSLRLDIQREQVSTIQDALRHI 713
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRF 291
S P+ ++ TS T ++ A + I+ L IL+LHL RF Y + K+ K + F
Sbjct: 714 SDPQPVQ--ITSPTQPGVIIDATQQALIEALPPILVLHLKRFLYDTSIGDVVKVGKQIAF 771
Query: 292 PLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFN--------DQ 340
+L + D L++PS + KY+L A + HHG S GHYT D + N
Sbjct: 772 TPELDVTPD-LISPSRKATHPVKYQLFAVLYHHGLSASGGHYTLDVLHPNRGLSERPRPG 830
Query: 341 WLHFDDASVTAIGTSKVL----HDQ--AYVLFYKQV 370
W+ DD V+ I V H+ AY+LFY++V
Sbjct: 831 WIRIDDELVSDIRNEDVFGGLDHNDRCAYLLFYRRV 866
>gi|19113320|ref|NP_596528.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe
972h-]
gi|24638294|sp|O94269.1|UBP3_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 3;
AltName: Full=Deubiquitinating enzyme 3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|3810845|emb|CAA21806.1| ubiquitin C-terminal hydrolase Ubp3 [Schizosaccharomyces pombe]
Length = 512
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 197/407 (48%), Gaps = 77/407 (18%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFV 68
+ + PRG IN+GN+CF+N+ LQALM C PF LL+++ R +P + P + +
Sbjct: 128 RPIQPRGFINTGNICFMNSILQALMYCVPFYNLLKQI-NRMVPYNFERTTPLIESLTMLS 186
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPR--------Q 119
DF R +S F+ + P+V S + G PR Q
Sbjct: 187 RDF-------------------REYS-EKFDLQGDSILPEVVYSATKGNPRFEMLQTGEQ 226
Query: 120 EDAQEFLSFIMDQMHDELLK------LQGESTS-------INGANTALVSL-----AEED 161
EDA+EFL+ +D++H+E ++ L+ + + NG + L S E
Sbjct: 227 EDAEEFLNLFLDELHEEFVRERRHYLLKNDERNPKSDIKISNGIKSGLDSFDDQSSVEAS 286
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E
Sbjct: 287 GWTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAE 346
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
+H++ DAL +APE L + +S G VTA K + I++L +LILHL RF Y + G
Sbjct: 347 DIHSVIDALEHMTAPEILPEWHSS----KGNVTATKQMYIESLPPVLILHLKRFFYEASG 402
Query: 282 ST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYF 337
T K +K + +P +L + +++ +PS G +Y+L A V HHG S GHYT D +
Sbjct: 403 GTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQL 461
Query: 338 NDQ-WLHFDDASVTAIGTSKVLHDQ----------------AYVLFY 367
+ W DD + + V + + AY+LFY
Sbjct: 462 DKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFY 508
>gi|328715698|ref|XP_001946389.2| PREDICTED: hypothetical protein LOC100160238 isoform 3
[Acyrthosiphon pisum]
gi|328715700|ref|XP_003245698.1| PREDICTED: hypothetical protein LOC100160238 isoform 2
[Acyrthosiphon pisum]
Length = 922
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 127/385 (32%), Positives = 199/385 (51%), Gaps = 43/385 (11%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-------TRDIPKAGYPTLTAFVG 66
L PRGL N C++NATLQAL++C PF L++ ++ R K+ P L + V
Sbjct: 537 LQPRGLTNRNTRCYINATLQALLTCPPFFNLMRSVQFKLKNRNNRGPQKSQTPILESMVQ 596
Query: 67 FVSDFDTPS---GGSSKKKNIS-------VLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 116
F+ +F S G +++++ + D G F PS +L F G
Sbjct: 597 FIGEFQQLSIKNGRTTQQQRQATSVATQETPDTGPAFEPSYVYKILPAFE-------EG- 648
Query: 117 PRQEDAQEFLSFIMDQMHDELLKL--QGESTSINGANTALV-SLAEEDEWETVGPKNKSA 173
RQEDA+EF+S++++ ++DE+++L +S NG A V ++ +EW+ V K+K
Sbjct: 649 -RQEDAEEFMSYLLNGINDEMIELIKMSKSNISNGETQAEVDAIDNNNEWKEVNGKHK-M 706
Query: 174 VTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
VTR + LS+IF GQL++ VK N+ + ++PF L LDI E ++ +AL +
Sbjct: 707 VTRRTVMEKTPLSEIFRGQLRTRTVKNGENEPTENIEPFFTLKLDI--EKAKSVREALDM 764
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 292
+ LEG T + A + V I L +L+LHL F Y Q TK+ K+V F
Sbjct: 765 LVNKDTLEGLTCPKTNRE--LDAYQQVTIDELPYVLLLHLKCFEYKQQKLTKIVKNVEFS 822
Query: 293 LQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 348
+ L + L+ S + R+Y+L A V H G++ +KGHY AD Y +WL FDDAS
Sbjct: 823 VDLKIEPRLISKNSKINMKTRQYKLFAVVYHDGKEANKGHYFADVFYVALGRWLRFDDAS 882
Query: 349 VTAIGTSKVLHDQ----AYVLFYKQ 369
V + +V + Y+L+Y++
Sbjct: 883 VRFVTDKEVCQPKPPCMPYLLYYRR 907
>gi|378728768|gb|EHY55227.1| ubiquitin thiolesterase [Exophiala dermatitidis NIH/UT8656]
Length = 898
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 119/378 (31%), Positives = 194/378 (51%), Gaps = 40/378 (10%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAG 57
M ++ E + L PRGL+N+GN+C++N+ LQ L+ C PF L ++ R P K+
Sbjct: 420 MNSVPEKPSKISFLKPRGLVNTGNMCYMNSVLQVLVFCLPFYDFLAKVAQR-APHAFKSD 478
Query: 58 YPTLTAFVGFVSDFDTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 111
P + A + F+ ++ +S + K + G F P A +K D+P
Sbjct: 479 TPLIDAIIMFIQEYPVICSANSVEQLRLRLKAEDYENYGDSFIPEYVYAAIK----DLPR 534
Query: 112 -SISGRPRQEDAQEFLSFIMDQMHDELLKL---------QGESTSINGANTALVSLAEED 161
R Q+DAQEFL F+++++H+E + G ++ I + + E
Sbjct: 535 FREMRRGHQQDAQEFLGFLLEELHEECARAMRSAGPSSNSGRASPIGSVSNTSEHVDAEG 594
Query: 162 EWETVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIY 219
W VG K K A+TR + S +++IFGG+L+S +K GNK S T++ + L LDI
Sbjct: 595 GWMEVGHKQKPAITRLSGAVSGESPITNIFGGKLRSELKVSGNKLSVTLEQYSPLQLDIG 654
Query: 220 SEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG- 278
S VH I DAL+ + PE+++G + G TA K + I+TL +LILHL RF Y
Sbjct: 655 SPQVHNIIDALKGMTRPESMQGDFYTPRGQKA--TATKQIFIETLPPVLILHLKRFHYDN 712
Query: 279 -SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR--------KYELVATVTHHGRDPSKGH 329
++ K+ K + +PL+L + +++ A + KY+L + + HHG++ + GH
Sbjct: 713 TTKRVEKIWKKIGYPLELEIPKEVFPM-QARNKYTVHGTLPKYQLASVIYHHGKNANGGH 771
Query: 330 YTADARYFND-QWLHFDD 346
YT D R + +W+ DD
Sbjct: 772 YTVDIRRQDGREWIRMDD 789
>gi|384248322|gb|EIE21806.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 282
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/259 (42%), Positives = 160/259 (61%), Gaps = 16/259 (6%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--EEDEWETVGPKNKSAVT 175
+QEDAQEFL F++D H+ELL+L+ + G N A S A +++EW G K
Sbjct: 29 QQEDAQEFLGFLLDSAHEELLRLRLLHAASLG-NPAEGSEAGGDDEEWLMAGRSKKKKAG 87
Query: 176 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
T + S +FGG L+S VKA G ASAT++P ++HLDI +AV ++ DAL F++
Sbjct: 88 GT-----TLASAVFGGALRSEVKAAGAPASATLEPCFVVHLDIQPDAVRSVSDALHAFTS 142
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
PE + GY+ N+ VTA+K V++ L +IL+LHL RFSYG G+ K+HK+V + +L
Sbjct: 143 PETISGYKVRD--NSEGVTARKVVQLYALPRILVLHLKRFSYGLTGTGKIHKTVHYGDRL 200
Query: 296 VLGRDLLV--TPSAE---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
+ + P A G Y+L+A V HHGR P+ GHYTAD R + +WL FDDA +
Sbjct: 201 RVQPSWMAEGCPDARHRGGADYDLIAVVHHHGRTPAAGHYTADVRQPDGKWLRFDDADLM 260
Query: 351 AIGTSKVLHD-QAYVLFYK 368
++ ++V+ D +AY+LFY+
Sbjct: 261 SVPLARVVDDNKAYLLFYQ 279
>gi|196004276|ref|XP_002112005.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
gi|190585904|gb|EDV25972.1| hypothetical protein TRIADDRAFT_55609 [Trichoplax adhaerens]
Length = 624
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 180/367 (49%), Gaps = 29/367 (7%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT-----RDIPKAGYPTLTAFVGFVSD 70
PRGL N + CF+N+TLQ+L+ CSP + L+++ + + I P + FV+
Sbjct: 230 PRGLTNKASFCFINSTLQSLLVCSPIHRALRKIGSFPTLQQTIGDCRTPAINGMAAFVNQ 289
Query: 71 FDTPSGGSSKKKNISVLDIGR------PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
FD +K +L G+ PF P +L P S++ RQEDA+E
Sbjct: 290 FDLLERQEYEKTFGKLLKAGKEVRFDNPFEPQCIYEMLAILRP----SMAKGERQEDAEE 345
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSL----AEEDEWETVGPKNKSAVTRTQSF 180
FL ++D +H+E++ + E +S + + + + + EW+ K KSA++RT +
Sbjct: 346 FLGCMLDNLHEEIVSISPEKSSASDQASCENDIDNINSGDGEWQQALSKKKSAISRTIAQ 405
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S +S+ FGG+++S +K K S T QPF L LDI+ + I+DA++ E +E
Sbjct: 406 NHSLISETFGGEIRSSIKYTNEKQSNTSQPFFTLQLDIHDSEISHIKDAIKKSMGSEQVE 465
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 300
Y + + G V A K + + L KILILHL RF + KL K V + LQL + ++
Sbjct: 466 HYISGNDGKKTKVEATKKMSFERLPKILILHLKRFIFDHGICQKLTKDVNYDLQLEIDKE 525
Query: 301 LLVTPSAE----GRKYELVATVT-----HHGRDPSKGHYTADARYFN-DQWLHFDDASVT 350
LL + G +L HHG + GHYT DA + + +W+ DD
Sbjct: 526 LLSRECKQSLNVGELKKLTIVTIVVVVFHHGLRAAGGHYTCDAYHASFKRWIRHDDTMAK 585
Query: 351 AIGTSKV 357
I ++
Sbjct: 586 TISDKEL 592
>gi|343424851|emb|CBQ68389.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Sporisorium
reilianum SRZ2]
Length = 919
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 145/441 (32%), Positives = 192/441 (43%), Gaps = 99/441 (22%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDFD 72
PRGL+N GN CF NA LQAL+ C+PF L L R++P P + A + F+ +F
Sbjct: 378 PRGLVNKGNFCFANAILQALVYCAPFYNLFS-LVGREVPADFGNATPLMEAVIHFLREFH 436
Query: 73 TPSGGSSKKKNISVL--DIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
GSS + L D PF P +++A+ N D R QEDAQEFL F
Sbjct: 437 PVHTGSSHALDSPQLAHDASEPFVPEFVYDAMRLNKRFDQ----MRRGHQEDAQEFLGFF 492
Query: 130 MDQMH-----------------------------DELLKLQG---------------EST 145
+D +H DE KL G + +
Sbjct: 493 LDTLHEELISAQRRSAIKLAHSAGGPNGLLANMSDEDKKLNGVSDDDLRRLGVRVGKQDS 552
Query: 146 SINGANTALVSLAEEDE----------------WETVGPKNKSAVTRTQSFLPSALSDIF 189
+ + L S + DE W VG K K+A TRT S S ++ IF
Sbjct: 553 AADAIGLGLDSAFDPDEIVEREVLRPVSPSEEGWMEVGQKGKTAYTRTTSTSESPITRIF 612
Query: 190 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
GG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G + S
Sbjct: 613 GGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPGVWSPS--R 670
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP---- 305
A V A K V +++L +L+LHL RF Y G + + P L G L + P
Sbjct: 671 AAEVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQ-----KSPKPLSYGTTLEIAPEVLS 725
Query: 306 ----SAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVL-- 358
S +Y L V HHGR S GHYT D R WLH DD I T V+
Sbjct: 726 PTMRSQPRPRYRLFGIVYHHGRYASGGHYTVDVLRQDGHSWLHIDDTMFHTIPTEHVVRN 785
Query: 359 ---------HDQ-AYVLFYKQ 369
HD AY+LFY++
Sbjct: 786 AASPSRDYGHDGLAYLLFYRR 806
>gi|302913332|ref|XP_003050898.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
77-13-4]
gi|256731836|gb|EEU45185.1| hypothetical protein NECHADRAFT_41715 [Nectria haematococca mpVI
77-13-4]
Length = 920
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/369 (34%), Positives = 191/369 (51%), Gaps = 51/369 (13%)
Query: 14 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
L PRGLIN+GN+C++N+ + +A+ S K+ P + A + F+ +F
Sbjct: 491 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSETPLIDAMIMFMHEFK 534
Query: 73 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
SS + KN + G PF+P ++EA+ + +P S R Q+DA+E
Sbjct: 535 IIKSASSVEPLRRSLKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 589
Query: 125 FLSFIMDQMHDELLKLQGEST---SINGANTALVSLAEEDEWETVGPKNKSAVTRTQ-SF 180
FL F++ + DE + ST AN A + D+W VG K K+AVTR+ S
Sbjct: 590 FLGFLLQSLDDECTSVMNSSTLAEQSEKANAAEGAAGTSDDWLEVGRKQKAAVTRSAGSN 649
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S +S IFGG L+S + G K S T +P+ L LDI S V + DALR + PE ++
Sbjct: 650 SSSPISKIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERIQ 709
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLG 298
G S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L +
Sbjct: 710 GDFNSPRGKD--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIP 767
Query: 299 RDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
RD+L S + R KY+L++ V HHG++ S GHYT D R +W+ DD
Sbjct: 768 RDVL---SRQKRQTYTDGAMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTV 824
Query: 349 VTAIGTSKV 357
+ + + V
Sbjct: 825 IRRVRSEDV 833
>gi|336367502|gb|EGN95847.1| hypothetical protein SERLA73DRAFT_162553 [Serpula lacrymans var.
lacrymans S7.3]
Length = 676
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 197/402 (49%), Gaps = 55/402 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------RTRDIPKAGYPTLTAFVGF 67
+ PRGLIN+GN+CF NA LQ L+ C PF +L EL K P + A V F
Sbjct: 277 IRPRGLINNGNMCFANAVLQVLVYCPPFWRLFTELGRFLGENGTQEEKTKIPLVDATVQF 336
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR-------- 118
+ +F + K K + D G + E +F P V +++ + +
Sbjct: 337 LKEFQPKASVQGKGKGVE-RDYG--YREDQEEDGFDSFLPTHVYDAMKEKKQFDHMRGGH 393
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE--------WETVGPKN 170
QEDA+EF F +D + +ELL + + A + E +E W VG +N
Sbjct: 394 QEDAEEFFGFYLDTLEEELLSIVSSISPATSKPNAHAHVEEREEAAPPPESGWLEVGRRN 453
Query: 171 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
K+ VTRT S ++ IFGG+ +S ++A K S V+ + L LDI E ++TI+DAL
Sbjct: 454 KTVVTRTIKTAESPITRIFGGKFRSTLRAPQQKDSVIVEDWRSLRLDIQREQIYTIKDAL 513
Query: 231 RLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHK 287
SAP++++ +S GVV A + V+I+ L IL+LH+ RF Y + G K+ K
Sbjct: 514 AYISAPQSVQ---VTSPARPGVVIDASQLVQIEALPPILVLHMKRFLYDMNAGGVAKVGK 570
Query: 288 SVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFN---- 338
V F +L +G D++ A GRK Y+L + HHG S GHYT D + N
Sbjct: 571 QVSFGPELEIGPDIM----APGRKVQPTRYKLFGVLYHHGLSASGGHYTLDVLHPNRDMS 626
Query: 339 ----DQWLHFDDASVTAIGTSKVL-----HDQ-AYVLFYKQV 370
+ W+ DD V+ + V D+ AY+LFY+++
Sbjct: 627 TKPREAWIRIDDELVSDVRAEDVFGGLERDDRCAYLLFYRRL 668
>gi|440795054|gb|ELR16195.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 649
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 118/361 (32%), Positives = 179/361 (49%), Gaps = 61/361 (16%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
RGL N GN CFLNAT+Q L++C PF+ L+ LR R +P V F F+
Sbjct: 330 RGLHNEGNTCFLNATVQCLLACPPFIGFLRSLRGRGLP----------VRFAEAFEL--- 376
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMHD 135
KK N ++ + + + F AV+K ++G P RQEDA EFLS ++D +H+
Sbjct: 377 --EKKANTQLVPLA---AKAHFAAVIKK--------LAGTPGRQEDAHEFLSLLLDTVHE 423
Query: 136 ELLKLQGES-----TSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
EL ++ + +GA+ + E +EW VG KNK++ RT F +A++ IFG
Sbjct: 424 ELRAGSAKARAGGGSGESGAHHKTAAHNETNEWNEVGRKNKTSKLRTAEFEDTAVTRIFG 483
Query: 191 GQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
+L+S +K++G K S T + F L LD+ + +++DAL F + E+L+
Sbjct: 484 CKLRSCLKSRGAKQSITQELFNALPLDVSVHQIRSLDDALLGFMSAESLDWE-------- 535
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
V A K K + + +L++HL RF++ + G K+ K + E R
Sbjct: 536 --VRASKEYKFERMPGVLVVHLKRFAFSAAGGDKIAKHI---------------DEKERR 578
Query: 311 KYELVATVTHHGRDPSKGHYTA----DARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y+L V HHG GHYTA D ++ H DD ++ VL QAY+LF
Sbjct: 579 SYDLFGVVEHHGHTLQSGHYTASIKRDQHWYYYYPYHVDDTTINPTTIQTVLRRQAYLLF 638
Query: 367 Y 367
Y
Sbjct: 639 Y 639
>gi|388855962|emb|CCF50537.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Ustilago
hordei]
Length = 901
Score = 174 bits (441), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 202/447 (45%), Gaps = 108/447 (24%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF- 71
PRGL+N GN CF NA LQ L+ C+PF L L R +P P + A + F+ +F
Sbjct: 363 PRGLVNKGNFCFANAILQTLVYCAPFYNLFN-LIARQVPADFGNATPLMEAVIHFLREFL 421
Query: 72 --------DTP---SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
D+P GGS+ + +L +++A+ N D R QE
Sbjct: 422 PADAANAIDSPFPGHGGSAAAASEPIL------PEYVYDAMRLNKRFDQMR----RGHQE 471
Query: 121 DAQEFLSFIMDQMHDELL----------------------KLQGESTSING--------- 149
DA+EFL F +D +H+EL+ K+ E +NG
Sbjct: 472 DAEEFLGFFLDTLHEELIAAQRKSAIKLAQSAGGPNGLLAKMSEEEKKLNGVSDDDLRRL 531
Query: 150 ---------ANTAL---------------------VSLAEEDEWETVGPKNKSAVTRTQS 179
A AL VS +EE W VG K K+A TRT S
Sbjct: 532 GVRVGKQGAAGDALGLDLEAVLDENEIIEREVMRPVSPSEEG-WMEVGQKGKTAYTRTTS 590
Query: 180 FLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
S ++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE +
Sbjct: 591 TSESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALFHLNEPETI 650
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLG 298
G + S G V A K V I++L +L+LHL RF Y G K K + + L +
Sbjct: 651 PGVWSPSRG--AEVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGTTLEIA 708
Query: 299 RDLLVTPS--AEGR-KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGT 354
++L +P+ A+GR +Y L V HHGR S GHYT D R WLH DD + T
Sbjct: 709 PEVL-SPAMRAQGRPRYRLFGIVYHHGRYASGGHYTVDVLRQDGHSWLHIDDTLYHTVPT 767
Query: 355 SKVL-----------HDQ-AYVLFYKQ 369
V+ HD AY+LFY++
Sbjct: 768 EHVVRNAASPVKDYGHDGLAYLLFYRR 794
>gi|302830983|ref|XP_002947057.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
nagariensis]
gi|300267464|gb|EFJ51647.1| hypothetical protein VOLCADRAFT_120420 [Volvox carteri f.
nagariensis]
Length = 2032
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/330 (36%), Positives = 175/330 (53%), Gaps = 40/330 (12%)
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-------------RQE 120
PS G S VL G+P PSM + F P + SI+ + Q+
Sbjct: 1700 PSSGPSASGKEVVLG-GQPLVPSMLSGIAAAFNPRI--SIAEKQTMAKVLSKSVVEQEQQ 1756
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA----EEDEWETVGPKNKSAVTR 176
DAQEF F+++++H+E+L L+ A S A + +EW VG KNK+ VTR
Sbjct: 1757 DAQEFFQFLVNRVHEEVLGLRKAHGLAAAPAAASASAAGGSDDGEEWSQVGRKNKATVTR 1816
Query: 177 TQSFLP-------SALSDIFGGQLKSVVKAQ----GNKASATVQPFLLLHLDIYSEAVHT 225
Q P S ++ IF G +KS ++ Q K SAT++ F +LHLDI +E V+T
Sbjct: 1817 -QVGTPADDASSRSPVTAIFSGLVKSTIRFQQPHANYKPSATIEVFNMLHLDIAAEGVNT 1875
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--- 282
+EDALR S PEN+E Y+ G + ++ AKK V++ L ++L+LHL RF+Y + G
Sbjct: 1876 LEDALRHHSVPENIE-YKPE--GASEMLPAKKDVRLYRLPEVLVLHLKRFTYTAAGGGHY 1932
Query: 283 TKLHKSVRFPLQLVLGRDLLV--TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ 340
TKL KSV F L L +L P +Y L AT+ HHGR + GHY AD + +
Sbjct: 1933 TKLQKSVAFNCLLRLEGKVLAEDCPDRANAEYRLFATINHHGRSIAGGHYIADVQQPDGC 1992
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
WL F+D V + VL ++ Y+LFY++V
Sbjct: 1993 WLRFNDEHVLLVSEGDVLRERPYLLFYQRV 2022
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL 48
+LPRGL N+GN CF+NAT+QAL++C+PF +L L
Sbjct: 1576 ILPRGLKNTGNTCFINATMQALLACAPFASVLSRL 1610
>gi|443682890|gb|ELT87325.1| hypothetical protein CAPTEDRAFT_168563 [Capitella teleta]
Length = 383
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 132/392 (33%), Positives = 193/392 (49%), Gaps = 48/392 (12%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTAFVGFVS 69
+PRGL N GN C++NATLQAL++C PF L++ L D P + P + V FV+
Sbjct: 1 MPRGLHNKGNWCYVNATLQALLACPPFYHLMKSLP--DFPALARGPSSTPVIDCLVEFVN 58
Query: 70 DFDTPSGGSSKKKNISV-------LDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
F T +K ++ + G PF P+ +L D RQEDA
Sbjct: 59 AFSTMQYKPLEKSALNAKGTVRQDIQTGIPFEPTYVYKMLHVIKNDTGFQ---HGRQEDA 115
Query: 123 QEFLSFIMDQMHDELLK----LQGESTS---------INGANTALVSLAEEDEWETVGPK 169
+EFLS +++ +HDE+L LQ S +NG E VGPK
Sbjct: 116 EEFLSCLLNALHDEMLASLQTLQPPSEELPPSDPVPEVNGDGEEQEEGWE-----QVGPK 170
Query: 170 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDA 229
NKS +TR F S +S + GQL+SV+ G + SAT++PF L LDI + + ++EDA
Sbjct: 171 NKSVLTREAKFKTSPVSAMMRGQLRSVLHKTGARESATLEPFFSLQLDIQGKDIRSVEDA 230
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH-KS 288
L ++ E L G+ S T V A + + ++ L +LILHL FSY G + + K
Sbjct: 231 LGGLTSRETLHGFTCSKTKQE--VDATQRLLLEELPPVLILHLKWFSYDKSGGIQKNVKQ 288
Query: 289 VRFPLQLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
V F L + +DLL ++ RKY+L A V H G GHY D + + W+
Sbjct: 289 VDFAADLEINKDLLSANAKSRLTSAQRKYKLFAVVNHLGGRAIGGHYITDVFHPGINSWV 348
Query: 343 HFDDASVTAIGTSKVLH----DQAYVLFYKQV 370
DD+ V ++ SKVL Y+L+Y+++
Sbjct: 349 RCDDSHVYSLPLSKVLKYVSPKVPYLLYYRRL 380
>gi|213405707|ref|XP_002173625.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212001672|gb|EEB07332.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 524
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 192/384 (50%), Gaps = 42/384 (10%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT---LTAFVGFVS 69
++ PRG +N+ N+CF+N+ QAL+ C PF L++ L + +P+ L + +
Sbjct: 156 NIQPRGFVNTSNMCFMNSIFQALLYCVPFYVLMRNL-GKKLPRLFRDKGSLLGSVITLTQ 214
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+F ++ G + P + V+KN P +G QEDA+EFL+
Sbjct: 215 EFRENWQPGEEE--------GDAYIPEVVYRVMKN-NPRFDLVQTGE--QEDAEEFLNLF 263
Query: 130 MDQMHDELLK---LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+D+MH+E ++ L+ S+ A EE+ W VG K K +TR+ + S ++
Sbjct: 264 LDEMHEEFVRTGNLEKASSPNADAVDKDKEDKEEEGWLEVGKKQKPVITRSATVSHSPIT 323
Query: 187 DIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
+IFGGQL+SV+K + S ++P+ L LDI + +H++ DA+ + PE L+G+R+
Sbjct: 324 EIFGGQLRSVLKVPNARDSVLLEPYQPLPLDIQPDHIHSVLDAMDHLTTPETLKGWRSP- 382
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVT 304
VTA K V I+ L +LILHL RF Y Q G+ K K + +PL+L + +++
Sbjct: 383 --KGHTVTATKQVFIEKLPAVLILHLKRFLYDDQAGGTLKNTKLISYPLRLEIPTR-VIS 439
Query: 305 PSAE---GRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHD 360
P +Y+L A V HHG GHYT D ++ W+ DD ++ I S V
Sbjct: 440 PGKRPLGPARYQLTAVVYHHGLSAQGGHYTVDVHQHDGSSWIRIDDTTIRTISESDVEVT 499
Query: 361 Q--------------AYVLFYKQV 370
+ AY+LFY +
Sbjct: 500 ENEATVNSSASSDRCAYLLFYTRC 523
>gi|164657422|ref|XP_001729837.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
gi|159103731|gb|EDP42623.1| hypothetical protein MGL_2823 [Malassezia globosa CBS 7966]
Length = 540
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/430 (30%), Positives = 190/430 (44%), Gaps = 99/430 (23%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF 71
+P GL+N GN CF +A LQ L+ C P L +LR +P+ P L A F S+
Sbjct: 132 VPVGLVNQGNSCFASAVLQMLVFCRPLYMFLTQLRMM-VPQDLSNSTPLLEAIFRFYSEI 190
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR------------Q 119
S ++ V K+ P +P+ I R Q
Sbjct: 191 PV-------------------VSKQLYGLVEKSVDPILPDYIYDAMRLHKRFDLFQLGHQ 231
Query: 120 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLA--------------------- 158
EDA+EFLS I+ +H+E++ + + ++ +L A
Sbjct: 232 EDAEEFLSLILSTLHEEVVLVFARAMQRKKSSASLQQRAPKKSVAMGDPYAAYPPPMESD 291
Query: 159 -------------------EEDEWETVGPKNKSAVTRT--QSFLPSALSDIFGGQLKSVV 197
E+DEW VG K ++++TRT + S ++ +F G+L+S +
Sbjct: 292 NSSDEEDILAMEVQRPPSPEQDEWLEVGQKGRTSLTRTSGNTDTHSPVTRMFDGKLRSTL 351
Query: 198 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 257
G K S V+P+ L LDI S VHTIEDALR + PE + G S V A K
Sbjct: 352 SCPGAKTSVMVEPYRSLPLDIQSSHVHTIEDALRHITEPELISG--VWSPQRNAYVDATK 409
Query: 258 SVKIQTLSKILILHLMRFS----YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG---R 310
V+I+ L +L+LHL RF YG Q ST K + F + L + D+L TP
Sbjct: 410 QVRIEALPPVLVLHLKRFVFDEFYGVQKST---KPIHFGMSLEISPDILSTPCRRACSLT 466
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVL---------HD 360
KY L V HHGR S GHYT R +D W+H DD + I +V+ +
Sbjct: 467 KYALFGVVYHHGRLASGGHYTVAVRRQDDSGWIHIDDTYASQISAEEVMFTGHRSSTHNG 526
Query: 361 QAYVLFYKQV 370
QAY+LFY++V
Sbjct: 527 QAYLLFYQKV 536
>gi|170109677|ref|XP_001886045.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638975|gb|EDR03249.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 949
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/406 (33%), Positives = 196/406 (48%), Gaps = 58/406 (14%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAFVGF 67
RGL+NSGN+CF N+ LQ L+ C+PF QL EL R P G P + A V F
Sbjct: 550 RGLVNSGNMCFANSVLQILVYCAPFYQLFGELGRVMPEPVVGKESQSQKEQPLVAATVAF 609
Query: 68 VSDF---DTPSGGSSKKKNI----------SVLDI--GRPFSPS-MFEAVLKNFTPDVPN 111
+ +F D G ++ ++ LD G F PS +++A+ + D N
Sbjct: 610 LKEFKGKDVVGAGGARNGSVGRKGKEREEREQLDDWDGDSFLPSYVYDAMKEKKRFD--N 667
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE------EDEWE 164
G QEDA+EFL F +D + +ELL L S S A A V E +D W
Sbjct: 668 MRGGH--QEDAEEFLGFYLDTLEEELLSILHSVSPSRQKAAPAPVEEKEEAAPPEQDGWL 725
Query: 165 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 224
VG +N++ VTRT S ++ IFGG+ +S ++A K S V+ + L LDI E +H
Sbjct: 726 EVGKRNRTVVTRTIKATESPITRIFGGKFRSTLRAPRQKDSVIVEDWRSLRLDIQREQIH 785
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 282
TI+DAL S P+ ++ S G + A + V I L ILILH+ RF Y + G
Sbjct: 786 TIQDALSYISHPQPVQVTHPSQPGI--TIDATQQVLIDALPPILILHIKRFCYDTTVGGV 843
Query: 283 TKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-- 338
K+ K V F +L +G DL+ T + KY+L + HHG S GHYT D + N
Sbjct: 844 VKVGKQVLFGPELEIGPDLMSTTVRKSHPTKYKLFGALYHHGHSASGGHYTLDVLHPNRY 903
Query: 339 -------DQWLHFDDASVTAIGTSKVL-------HDQAYVLFYKQV 370
+ W+ DD V+ + V AY+LFY+++
Sbjct: 904 PGATKSREGWVRIDDELVSDVRYEDVFGVSERDDSRCAYLLFYRRI 949
>gi|395333867|gb|EJF66244.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 925
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/401 (32%), Positives = 199/401 (49%), Gaps = 57/401 (14%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT----------RDIPKAGYPTLTA 63
+ PRGL+N+GN+CF NA LQ L+ C PF + +L+ R+ KA P + A
Sbjct: 529 IRPRGLVNTGNMCFANAVLQILVYCPPFHRFFSDLKKHLAGPVVGSQREGSKA-TPLVDA 587
Query: 64 FVGFVSDF--DTPS-----------GGSSKKKNISVLDIGRPFSPS-MFEAVL--KNFTP 107
+ F+ +F D P+ G + N LD F PS +++A+ K F
Sbjct: 588 TIQFLKEFVPDPPANANVNANMKSKGKEREDDNFDELDS---FIPSYVYDAMKEKKRFA- 643
Query: 108 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG 167
N I G QEDA+EFL F +D + +ELL + +S A TA A +D W VG
Sbjct: 644 ---NMIGGH--QEDAEEFLGFYLDTLEEELLSI-SQSLQPQDAPTAPEEEAHDDGWLEVG 697
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
KNK+ TRT S ++ IFGG+ +S ++A + S T++ + L LDI E V T+
Sbjct: 698 KKNKAVATRTAKSTESPITRIFGGKFRSALRAPHQRESVTIEDWRSLQLDIQPENVKTLR 757
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKL 285
DAL S P+ ++ + G ++ A++ V I+ L +LILH+ RF Y ++ K+
Sbjct: 758 DALLHISQPQQVQISIPTRPG--ALLDAQQQVLIEALPPVLILHMKRFLYDTKVGDVVKV 815
Query: 286 HKSVRFPLQLVLGRDLL--VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ--- 340
K V F +L + +++ V + + KY+L + HHG S GHYT D + N +
Sbjct: 816 GKQVSFASELDVPPEIISQVKRTTQPVKYQLFGVLYHHGMTASGGHYTLDVLHPNRELSE 875
Query: 341 -----WLHFDDASVTAIGTSKVL------HDQAYVLFYKQV 370
W+ DD V+ + V Q Y+LFY+++
Sbjct: 876 RPRAAWIRIDDELVSDVRPDDVFGGQEREDRQPYLLFYRRM 916
>gi|429849220|gb|ELA24624.1| ubiquitin c-terminal hydrolase [Colletotrichum gloeosporioides Nara
gc5]
Length = 906
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 190/374 (50%), Gaps = 40/374 (10%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFV 68
V+ + PRGLIN+GN+C++N+ LQ L+ C PF L ++ R + K+ P + A + F+
Sbjct: 455 VQFIEPRGLINTGNMCYMNSVLQVLLFCIPFYDFLDQVSKRAVHKFKSDTPVIDAMIMFM 514
Query: 69 SDF------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
+F D+ K KN + G F P E V K P + R Q+DA
Sbjct: 515 REFRVIDSTDSVEKLRKKLKNEQLEQYGDSFIP---EFVYKAIQPLPAFASMRRGHQQDA 571
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGA-----NTALVSLAEE----DEWETVGPKNKSA 173
QEFL I++ + +E ++ T+ NGA ++ S+AE D W VG + ++
Sbjct: 572 QEFLGLILNAIDEECAQVMSSGTA-NGAPEVRPTSSAASVAESQDGVDGWFEVGSRQRAV 630
Query: 174 VTRTQ-SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
TR+ + ++ +F GQ +S ++ G K S T +PF L LDI + ++ + DA++
Sbjct: 631 ETRSSGGSQTTPITRLFSGQYRSELRRPGVKDSVTTEPFQSLQLDIGAPYINNVVDAIKG 690
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP 292
+ PE L+ G+A +T K I+TL ILILHL RF + ++G+TK+ K V +
Sbjct: 691 LTLPERLQ-------GDAAPMT--KQTLIETLPPILILHLKRFKFDTEGTTKIGKKVGYA 741
Query: 293 LQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLH 343
L L L R+ LV A KY L V HHG+ + GHYT D R ++ +W+
Sbjct: 742 LDLQLPAEVLSKRRRNALVAEGAGMPKYRLTGVVYHHGKQANGGHYTVDVRRQDENEWIR 801
Query: 344 FDDASVTAIGTSKV 357
DD + + + V
Sbjct: 802 LDDTVIRRVRSEDV 815
>gi|260949681|ref|XP_002619137.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
gi|238846709|gb|EEQ36173.1| hypothetical protein CLUG_00296 [Clavispora lusitaniae ATCC 42720]
Length = 933
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 206/442 (46%), Gaps = 96/442 (21%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY----PTLTAFVGFV 68
++ PRGL NSGN+C++NA LQ L+ C PF +LL+ ++ + I G P L A + F+
Sbjct: 504 EVKPRGLTNSGNICYMNAVLQCLVMCEPFNKLLRHVQEKSIGTLGKTSPTPLLDATISFI 563
Query: 69 SDF-DTPSGGSSKKKNISVLD-----IGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQED 121
DF + PS S K N+S L+ +G+P SP S++ +++N P + G+ QED
Sbjct: 564 EDFINIPS---SSKPNVSSLNSEGIVVGKPLSPESLYMKLIEN--PKFKHLKWGQ--QED 616
Query: 122 AQEFLSFIMDQMHDEL--------------------------------LKLQGESTSING 149
A+EFL +++D +H+E LK++ + +
Sbjct: 617 AEEFLGYLLDGLHEEFVKAEASVSPEMLEMLYNKYSQSLDPHLAEQLKLKMKSGARLVRS 676
Query: 150 ANTALVSLAEEDE-----WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 204
+ V +EE E W VG K R PS +++IFGG +SV+ K
Sbjct: 677 TESKEVEDSEESEGDHSGWSEVGSGKKVNKKRVMEVEPSPITEIFGGSFRSVLTVPKAKV 736
Query: 205 SA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 262
S T+ P+ + +DI + + TIEDAL + E + Y+ + V A+K I+
Sbjct: 737 SQSITIDPYRSIQVDISHKEIETIEDALLRITEVEKIP-YKIEA---GKEVIARKQSFIE 792
Query: 263 TLSKILILHLMRFSY------------GSQGST-----------KLHKSVRFPLQLVLGR 299
L ++LIL L RFS+ G Q S K+ K++++ L L +
Sbjct: 793 KLPQVLILQLKRFSFEHQQPQIATSENGEQDSKSISTHHIGTIEKVMKNIKYGLDLTVPL 852
Query: 300 DLL---VTPSAEGRKYELVATVTHHGRDPSKGHYTADA--RYFNDQWLHFDDASVTAIGT 354
+ L V P+ E R Y L+ V HHGR+ GHYT D +WL DD +V I
Sbjct: 853 ECLSSGVRPT-EKRDYRLIGVVYHHGRNAEGGHYTCDVLRNKREKKWLRIDDTAVETITA 911
Query: 355 SKVL------HDQAYVLFYKQV 370
V+ AY+L Y++V
Sbjct: 912 DMVVDVPDARDKSAYILMYQRV 933
>gi|198427145|ref|XP_002120858.1| PREDICTED: similar to ubiquitin specific peptidase 10 [Ciona
intestinalis]
Length = 714
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 119/392 (30%), Positives = 192/392 (48%), Gaps = 50/392 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT----RDIPKAGYPTLTAFVGFVS 69
+PRGL N+ N C++NATLQAL+ C PF Q L+ + T P + +F+ S
Sbjct: 335 FIPRGLTNTSNWCYINATLQALLVCPPFYQFLKSISTFTPLSQKTVTCSPIIDSFLQLAS 394
Query: 70 DF---DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
+F T G +K+ + G PF P +L + +S+S + RQEDA+EF
Sbjct: 395 EFRPLSTKRGFVTKE-----VRHGPPFEPRYIYDMLTL----IKSSLSEKGRQEDAEEFQ 445
Query: 127 SFIMDQMHDELLKL-------------QGESTSINGANTA---LVSLAEEDEWETV--GP 168
S +++ +H+E+ +L + S + ++T+ + AE++EWE V
Sbjct: 446 SCVLNGLHEEMTQLFTYLNDSANSQSPESHSEQDDSSSTSEELMNGDAEKEEWEEVMATK 505
Query: 169 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 228
KNKSAVTR + +SD+F G+L + V G K S + +PF L L + ++ ++D
Sbjct: 506 KNKSAVTRRADDTRTPISDMFRGELCTSVFRPGQKVSVSYEPFFSLPLSVPADHACNVDD 565
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHK 287
AL + E+ G A + +++L I ILHL RF Y G K+ K
Sbjct: 566 ALMSLTDKESFLA------DGEGQSDASRQQTLESLPPIFILHLKRFVYDKSGGLKKIDK 619
Query: 288 SVRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
V + +V+G+++L S R Y+L A V HHG + GHYT D + WL
Sbjct: 620 KVEYKTDMVIGKEMLSKSARKLSINQRTYKLFAVVYHHGEKATGGHYTTDVFHIGLSSWL 679
Query: 343 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
DD ++ + ++V AY+L+Y+++
Sbjct: 680 RIDDQNIKTVHHTEVTRHNPSRTAYLLYYRRI 711
>gi|116197711|ref|XP_001224667.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
gi|88178290|gb|EAQ85758.1| hypothetical protein CHGG_07011 [Chaetomium globosum CBS 148.51]
Length = 915
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/343 (33%), Positives = 181/343 (52%), Gaps = 36/343 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C PF L ++ + K+ P + A V F+ +F
Sbjct: 482 LEPRGLVNTGNMCYMNSVLQVLIFCVPFFDFLDQVSKKATHSFKSDTPLVDAMVMFMREF 541
Query: 72 ---DTPSGGSSKKKNISVLDI---GRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
D+ + KK + + G PF+P+ ++N +P S R QEDAQE
Sbjct: 542 KSIDSAASADQLKKRLKSEEYEKYGEPFTPAFVYEAIRN----LPRFASMRRGHQEDAQE 597
Query: 125 FLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAEE-----DEWETVGPKNKSAVTR 176
FL F+++ +HDE +++ ST+ + S A E D+W VGP+ +SAVTR
Sbjct: 598 FLGFLLEGLHDECAQVMRAAPNSTASTAPPSPTSSRANESVEGTDDWLEVGPRQRSAVTR 657
Query: 177 T--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
+ S S ++ IFGG L+S + G K S T++P+ L LDI S V I DAL+ +
Sbjct: 658 SSGHSHTLSPINKIFGGHLRSEFRVPGKKNSVTLEPYQPLQLDIGSPEVRNIIDALKGLT 717
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---GSQGSTKLHKSVRF 291
E L G S G V A K V I+++ +L+LHL RF + G G+ K+ K + +
Sbjct: 718 RSEVLHGDFNSPHGKD--VRATKQVFIESVPPVLVLHLKRFQFDAEGYGGTVKIWKKIGY 775
Query: 292 PLQLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPS 326
PL+ R++L + ++ +Y L++ + HHG++ S
Sbjct: 776 PLEFEFPREVLSRQTRNNILAGNSGAPRYRLISVIYHHGKNAS 818
>gi|405119403|gb|AFR94176.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1109
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 203/443 (45%), Gaps = 98/443 (22%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSD 70
++PRGLIN+GN+CF N LQ L+ C PF +L +E R D+ + P L A + F+ +
Sbjct: 678 MVPRGLINTGNMCFANTILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIVFLRE 736
Query: 71 F-----------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 119
F TP G K + I ++++A+ +N D S+ R Q
Sbjct: 737 FVSSPEPSTSTTSTPKGKGKDKDSRKEAFIPE----NVYDAMKENKRFD---SMR-RGYQ 788
Query: 120 EDAQEFLSFIMDQMHDELLKL----------------------QGESTSINGANTALVSL 157
EDA+E+L F ++ +H+E++ L + E GA +
Sbjct: 789 EDAEEYLGFFLNTLHEEIIYLLSRTSTTSSSIPNGQPSDSSSREVERPVSPGAAGINGNA 848
Query: 158 AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 217
W VG K K+ V R SA+S +FGG+L+S++ G K S T++P+ L LD
Sbjct: 849 DSSSGWLEVGKKQKTHVVRATESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLD 908
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I + A+ +I DALR S PE + G +++ G G V A K+V ++T K+LI HL RF Y
Sbjct: 909 ITAPAILSITDALRAISTPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVY 966
Query: 278 GSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTA 332
++ G K K+V + + L + + +++P+ KY L V HHG S GHYT
Sbjct: 967 DTEEGGVVKRSKAVAYGVDLAIPNE-IISPARRTSTPIKYALFGVVYHHGSSASGGHYTV 1025
Query: 333 D-AR---------------------------YFNDQWLHFDDASVTAIGTSKVL--HDQ- 361
AR +WLHFDD +V + V+ DQ
Sbjct: 1026 SVARPSSSSSSSTPSTSVQSPVGASSPSSISSATSRWLHFDDENVREVREDDVVVSMDQA 1085
Query: 362 --------------AYVLFYKQV 370
AY+LFYK+V
Sbjct: 1086 KGGESGSVGGREKCAYLLFYKRV 1108
>gi|443896840|dbj|GAC74183.1| ubiquitin-specific protease [Pseudozyma antarctica T-34]
Length = 854
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 140/445 (31%), Positives = 194/445 (43%), Gaps = 102/445 (22%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVSDF- 71
PRGL+N GN CF NA LQ L+ C+PF L L ++P P + A + F+ +F
Sbjct: 335 PRGLVNKGNFCFANAILQTLVYCAPFYNLFT-LVGNEVPADFGNATPLMEAVIHFLREFL 393
Query: 72 ---------DTPSGGSSKKKNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSISGRPRQED 121
D P G + PF P +++A+ N D R QED
Sbjct: 394 PADASHALNDGPLPGQDASTAAAA---SEPFLPEFVYDAMRLNKRFDQ----MRRGHQED 446
Query: 122 AQEFLSFIMDQMHDELLKLQGEST-----SINGANTALVSLA------------------ 158
A+EFL F +D +H+EL+ Q S S +G N L ++
Sbjct: 447 AEEFLGFFLDTLHEELISAQRRSALKLAQSASGPNGLLAKMSEEEKKLNGVSDDDLRRLG 506
Query: 159 ---------------------EEDE----------------WETVGPKNKSAVTRTQSFL 181
++DE W VG K K+A TRT S
Sbjct: 507 VRINKDGSSADAVGLGLEAALDDDEIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTS 566
Query: 182 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 241
S ++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G
Sbjct: 567 ESPITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPEIIPG 626
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRD 300
S A V A K V +++L +L+LHL RF Y G K K + + L + +
Sbjct: 627 --VWSPARAAQVDATKQVFVESLPPVLVLHLKRFIYDEIGGVQKSQKPLAYGTTLDIAPE 684
Query: 301 LLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSK 356
+L +P+ + +Y L V HHGR S GHYT D R WLH DD I T
Sbjct: 685 VL-SPAMRAQPRPRYRLFGIVYHHGRHASGGHYTVDVLRQDGHSWLHIDDTLFHPIPTEH 743
Query: 357 VL-----------HDQ-AYVLFYKQ 369
V+ HD AY+LFY++
Sbjct: 744 VVRNAASANKDHGHDGLAYLLFYRR 768
>gi|290986388|ref|XP_002675906.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
gi|284089505|gb|EFC43162.1| ubiquitin carboxyl-terminal peptidase [Naegleria gruberi]
Length = 719
Score = 168 bits (425), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/396 (30%), Positives = 188/396 (47%), Gaps = 63/396 (15%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
+ PRG+ N N C++NA LQ L+S F +++ L + YP FV V+++ T
Sbjct: 274 IQPRGMTNINNSCYMNAVLQTLVSLPQFYHVMKRLGKISLDNEEYPLTNKFVRLVNEYQT 333
Query: 74 ------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------QE 120
SG +KK+ + F + E ++ ++ D S Q
Sbjct: 334 MKTHRPQSGKEGEKKD------RKYFINASTEHLVPSYIVDYIQQSSTNLEDAFLLGTQH 387
Query: 121 DAQEFLSFIMDQMHDELLKLQG------------------ESTSINGANTALVSLAEEDE 162
DA EFL+ I+ ++H+EL K + E+TS + + +EE
Sbjct: 388 DAHEFLNHILQRLHEELKKTEATLGRKSPSASKKKSNKKQEATSEQAEQPSTETTSEE-- 445
Query: 163 WETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYS 220
W+ VG KNK+ R S+ ++ F G++KS V+ QG +K S+ V+PF LHL I
Sbjct: 446 WKEVGKKNKANPMREHEMGDSSVIARTFAGKMKSFVQKQGESKGSSVVEPFFSLHLPIKD 505
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS- 279
E + ++ ALR + EN+ S+ I L K+L+LHL RF + S
Sbjct: 506 ENIKGVKFALREMTKEENVSDKNAKSS-------------IYQLPKVLLLHLRRFDFSST 552
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GR---KYELVATVTHHGRDPSKGHYTAD 333
+G K+ K +RF +L + D V P+ + GR KY L + + HHG+D + GHY+
Sbjct: 553 EGVQKISKRIRFDYELNI--DEKVVPNVKAISGRPSLKYRLASVICHHGKDATSGHYSTY 610
Query: 334 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
++ +W+H DD VT + VL QAY+L Y Q
Sbjct: 611 IQHGCGKWIHIDDTKVTVVSLQHVLDQQAYILTYVQ 646
>gi|71019387|ref|XP_759924.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
gi|46099579|gb|EAK84812.1| hypothetical protein UM03777.1 [Ustilago maydis 521]
Length = 918
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 197/442 (44%), Gaps = 98/442 (22%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFDT 73
PRGL+N GN CF NA LQ L+ C+PF L + + G P + A + F+ +F
Sbjct: 385 PRGLVNKGNFCFANAILQTLVYCAPFYNLFNLVANQISADFGNATPLMEAVIQFLREF-L 443
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSIS--------GRPRQEDAQE 124
P S+ LD P A + F P+ V +++ R QEDA+E
Sbjct: 444 PVDSSTS------LDARHPGQDGFIAAASEPFVPEFVYDAMRLNKRFDQMRRGHQEDAEE 497
Query: 125 FLSFIMDQMHDEL--------LKLQGESTSING--------------------------- 149
FL F +D +H+EL LKL +++ NG
Sbjct: 498 FLGFFLDTLHEELISAQRRSALKLAQSASAPNGLLSKMSDDEKKLNGVSDDDLKRLGVRV 557
Query: 150 ----ANTALVSLA-----EEDE----------------WETVGPKNKSAVTRTQSFLPSA 184
A+ V L +ED+ W VG K K+A TRT S S
Sbjct: 558 GKDAASADAVGLGLDAAFDEDDIVEREVMRPVSPSEQGWMEVGQKGKTAYTRTTSTSESP 617
Query: 185 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 244
++ IFGG+L+SV+K G K S T++P+ L LDI V +IEDAL + PE + G +
Sbjct: 618 ITRIFGGKLRSVLKTPGAKDSVTLEPYQPLQLDIQPAHVQSIEDALLHLTEPETIPGVWS 677
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLV 303
S + V A K V I++L +L+LHL RF Y G K K + + L + D+L
Sbjct: 678 PS--RSAQVDATKQVFIESLPPVLVLHLKRFIYDEIGGVQKSQKPLSYGSTLEIAPDVL- 734
Query: 304 TPSAEGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVL- 358
+P+ + +Y L V HHGR S GHYT D R WLH DD + T V+
Sbjct: 735 SPAMRSQPRPRYRLFGIVYHHGRHASGGHYTVDVLRQDGLSWLHIDDTLFYNVATEHVVR 794
Query: 359 ----------HDQ-AYVLFYKQ 369
HD AY+LFY++
Sbjct: 795 NAASTSKDHAHDGLAYLLFYRR 816
>gi|255727604|ref|XP_002548728.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
gi|240134652|gb|EER34207.1| hypothetical protein CTRG_03025 [Candida tropicalis MYA-3404]
Length = 534
Score = 167 bits (424), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 188/403 (46%), Gaps = 72/403 (17%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLTAFVGFVS 69
D+ PRGL NSGN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 159 DVKPRGLTNSGNICYMNSILQILLYCEPFNRLLKLIETKSIGSLGVSPTPLLDATITFFN 218
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
F S P SP F + L T S +QEDA+EFL +
Sbjct: 219 QFQEDSKA--------------PVSPEDFYSSL---TKQDKFSHLKWGQQEDAEEFLGYY 261
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEED---------------------------- 161
+D ++DE+L + +S S + + + + ++E
Sbjct: 262 IDGLNDEMLN-EIKSVSTSQVDKLIQTYSQEHDSESSAKFKYNIKSTIRRIKNEEEEEDG 320
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHLD 217
EW V K S T+ + P+ L+ IFGGQ KSVV ++ + S T+ PF + LD
Sbjct: 321 EWSQVNNKKNSTTTKIE-VDPTPLNMIFGGQFKSVVTIPKQSSSFQRSITLDPFQHVQLD 379
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I AV TIEDA + + EN+ S T N + KK I+ L +LI+HL RFSY
Sbjct: 380 I--SAVDTIEDAFKHLNELENI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRFSY 432
Query: 278 GSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA 334
G KL K + + L++ +++L T + KY+L A V HHG GHYT+D
Sbjct: 433 LKDQEIGVEKLRKKIDYSHDLIIPKEVLATEPSTPIKYQLSAVVYHHGSSADAGHYTSDI 492
Query: 335 RYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 370
+ W DD V I +VL+ AY+L Y ++
Sbjct: 493 -HNAGVWWRIDDTFVKQIKNEEVLNAGTEENIKNAYILLYSRI 534
>gi|342319815|gb|EGU11761.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 974
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 129/396 (32%), Positives = 186/396 (46%), Gaps = 69/396 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDI----------PKAGYPTLT 62
PRGLIN+GNLCF NATLQAL+ C F + L++ +D+ K+ +
Sbjct: 530 PRGLINNGNLCFANATLQALVYCGAFWNLLGLIERGTKKDLREAMAGKTEKDKSERSAVE 589
Query: 63 AFVGFVSDFDT----------PSGGSSKKKNISVLDIG------RPFSPSMFEAVLK--- 103
A + F+++F T P+ +S N PF+ ++ +
Sbjct: 590 AMIAFLAEFRTSVSSTSPAFDPAQNTSSSANADASTSSGTSTPKPPFNNNVHPPISSASS 649
Query: 104 --------------NFTPDVPNSISGRPR--------QEDAQEFLSFIMDQMHDELLK-- 139
+ TP + +S+ PR QEDA+EFL F ++ +H+E++K
Sbjct: 650 VASSSSATSQPAPLSPTP-IHDSLRHNPRFDAMRRGTQEDAEEFLGFFLETLHEEVVKIM 708
Query: 140 -LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK 198
L+ + G A+ ++ WE VG K + A TRT S ++ IFGG+L+SV++
Sbjct: 709 ELEEKKEQGKGKGKAISQAGGDEGWEEVGSKGRVATTRTTETKESPITRIFGGKLRSVLR 768
Query: 199 AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKS 258
G K S T++PF L LDI + V +IEDAL +APE+L Y TS + A K
Sbjct: 769 CPGQKDSVTIEPFQRLQLDIQPDHVLSIEDALVQLTAPESLPDYVTS---RGRTLDATKQ 825
Query: 259 VKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTP-----SAEGRKY 312
V + L +LILHL RF Y G K K V + +L + ++ P G KY
Sbjct: 826 VFLDALPPVLILHLKRFLYDEVGGVQKSTKKVAYGTELAIDERVMSAPLKAQVGRAGAKY 885
Query: 313 ELVATVTHHGRDPSKGHYTADAR--YFNDQWLHFDD 346
EL V HHG S GHYT R Y + WL DD
Sbjct: 886 ELFGVVYHHGLHASGGHYTVAVRRGYHSPTWLELDD 921
>gi|328854199|gb|EGG03333.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 692
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 184/389 (47%), Gaps = 63/389 (16%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR--TRDIPKAGYPTLTAFVG 66
K V ++PRGLIN+GN+CF NA LQ L+ C PF LL+ L T K+ P L A +G
Sbjct: 291 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLNLYTSHDFKSQTPLLDAMIG 350
Query: 67 FVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 118
F+++F++ P K+ ++ R P+ + + + F + V + G R
Sbjct: 351 FINEFESIPLSELEPIKDPKTSNVLRYHLPTHLKKIGEPFIAESVWIATKGNSRFDAMRG 410
Query: 119 --QEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE-- 160
QEDAQEFL F +D +H+ELL +L +T+ + L A E
Sbjct: 411 GQQEDAQEFLCFFLDTLHEELLTAIDRHDGPIRLRQQLADAATNTTNKDNHLKPPANELD 470
Query: 161 ------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 214
D W VG K + +VTR+ + S L+ IFG +S++ K S T +P +L
Sbjct: 471 QPNSSSDGWMEVGSKGRPSVTRSTDSILSPLTSIFGFNTRSILHKPKQKDSVTFEPNNML 530
Query: 215 HLDIYSEAVHTIEDALRLFSAPE------NLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 268
L I S + TIE+AL FS PE N G ++S+T K + I++ +
Sbjct: 531 QLSIESPNIKTIEEALLNFSTPEIISDMMNKNGIKSSAT---------KQIFIESFPPVF 581
Query: 269 ILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-------KYELVATVTHH 321
ILHL RF Y K KS++F G L + S G Y+L A V HH
Sbjct: 582 ILHLKRFGYFEGEVKKNSKSIKF------GNFLKIPASVRGPAQRNEEVSYKLFAVVYHH 635
Query: 322 GRDPSKGHYTADAR-YFNDQWLHFDDASV 349
G S GHYT + D+W++FDD +
Sbjct: 636 GLMASGGHYTVSIKQQITDEWIYFDDTII 664
>gi|330792183|ref|XP_003284169.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
gi|325085866|gb|EGC39265.1| hypothetical protein DICPUDRAFT_52731 [Dictyostelium purpureum]
Length = 442
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 152/269 (56%), Gaps = 28/269 (10%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGE-------------STSINGANTALVSLAEEDEWET 165
Q+DAQEFL F++D +++E L L + S+S + +++ S D+WE
Sbjct: 180 QQDAQEFLVFLLDLINEEFLTLLKDIDIKDEEKSLLSPSSSSSSSSSKDSSELNSDDWEV 239
Query: 166 VGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAV 223
VG K+AV T +Q LP + +S IF G L+S G K S TV+PF LHLDI E +
Sbjct: 240 VGKNGKTAVFTNSQQELPKTPISQIFSGVLRSSFNRTGQKESITVEPFYCLHLDIRPEEI 299
Query: 224 HTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
+++EDAL+ F PE +E Y + +TA KS ++L +ILI+HL RF++ S S
Sbjct: 300 NSLEDALKFFMKPEIIEDY--TCPNKKTEITASKSWSFESLPRILIIHLKRFAFESDASR 357
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ--- 340
KL K + FP QL + T ++ +KY L++ V+HHGR S+GHYT D F Q
Sbjct: 358 KLDKKISFPTQLP-----ITTANSVHKKYSLLSVVSHHGRGLSQGHYTCDI--FEQQKNI 410
Query: 341 WLHFDDAS-VTAIGTSKVLHDQAYVLFYK 368
W+ +DDA + I VL +AY+L Y+
Sbjct: 411 WIRYDDAQIINDIKEKDVLEREAYLLLYQ 439
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
PRGLIN+ N CF+N LQ+L C F+++++ ++ D YPTL +F F +++
Sbjct: 18 PRGLINTSNTCFMNVILQSLTGCQLFLKVIKNIQDLDNLHI-YPTLNSFNQFYAEY 72
>gi|444722234|gb|ELW62932.1| Ubiquitin carboxyl-terminal hydrolase 10 [Tupaia chinensis]
Length = 881
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 182/356 (51%), Gaps = 67/356 (18%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNA------------------TLQALMSCSPFVQLL 45
I++PV L PRGLIN GN C++NA TLQAL++C P L+
Sbjct: 401 IHKPVS----LQPRGLINKGNWCYINAEVPRARFFPLRFLTAHVQTLQALVACPPMYHLM 456
Query: 46 Q--ELRTR-DIPKAGYPTLTAFVGFVSDF---DTPSGGSSKKKNISVLD--IGRPFSPSM 97
+ L ++ P P + +FV +++F P + ++ +++ P P
Sbjct: 457 KFIPLYSKVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQGEYHVRLMNEFTNMPVPPKP 516
Query: 98 FEAV----LKNFTPD--------------VPNSISGRPRQEDAQEFLSFIMDQMHDELLK 139
+A+ +++ P + +S+S + RQEDA+E+L FI++ +H+E+L
Sbjct: 517 RQALGDKTVRDIRPGAAFEPTYIYRLLTVIKSSLSEKGRQEDAEEYLGFILNGLHEEMLN 576
Query: 140 LQG---------------ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
L+ +S S++ E+EWE VGP+NKS+VTR F+ +
Sbjct: 577 LKKLLSPSNEKLPVSNGPKSHSVSEEEQEEQGAGSEEEWEQVGPRNKSSVTRQAEFVQTP 636
Query: 185 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 244
++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T
Sbjct: 637 ITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTT 696
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGR 299
+ V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + +
Sbjct: 697 KTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISK 749
>gi|320590158|gb|EFX02601.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 926
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 186/384 (48%), Gaps = 80/384 (20%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 69
SV + PRGLIN+GN+C++N+ LQ L+ C+PF L +
Sbjct: 490 SVAFIEPRGLINTGNMCYMNSVLQVLIFCTPFYDFLDQ---------------------- 527
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQEFL 126
N + G F+P ++EA+ L F S+ R Q+DA+EFL
Sbjct: 528 -------------NDDLERYGDAFTPEFVYEAIKQLSRF-----ESMR-RGHQQDAEEFL 568
Query: 127 SFIMDQMHDELLKL-QGESTSINGANTALVS-----------LAEEDEWETVGPKNKSAV 174
F+++ +++E K+ Q S + N ++T + + L+ D W VGP+ ++A+
Sbjct: 569 GFLLECLNEECTKVVQDSSRATNPSSTQVTTPTASVTSEIPDLSGGDGWLEVGPRQRAAI 628
Query: 175 TRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
TR+ S+ ++ IF G+L+S ++ G K S T++P+ L LDI S V I DALR
Sbjct: 629 TRSSGHTSSSPVNSIFSGKLRSELRVPGLKDSVTLEPYQSLQLDIDSPQVRNILDALRGL 688
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRF 291
+ PE L G S G V+ K V I+TL +LILHL RF + Q G+ K+ K + +
Sbjct: 689 TKPEVLNGDFGSPHGKD--VSVTKQVFIETLPPVLILHLKRFQFDWQGNGTVKIWKKIGY 746
Query: 292 PLQLVLGRDLLVTPSAEGR------------KYELVATVTHHGRDPSKGHYTADA-RYFN 338
PL+L + R++ GR KY L A V HHG+ S GHYT D R
Sbjct: 747 PLELEIPREIF------GRQKRNKLLTERLPKYRLNAVVYHHGKQASGGHYTVDVLREDG 800
Query: 339 DQWLHFDDASVTAIGTSKVLHDQA 362
+W+ DD + I + V A
Sbjct: 801 REWIRLDDTVIRRIRSEDVAESGA 824
>gi|410076176|ref|XP_003955670.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
gi|372462253|emb|CCF56535.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
Length = 829
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 136/447 (30%), Positives = 205/447 (45%), Gaps = 92/447 (20%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
+K + PRG+IN+ N+CFL++ LQ L+ C PF+ +L L TR+ I + L A +
Sbjct: 386 LKSIFPRGIINTANVCFLSSVLQVLLYCQPFIDVLNVLSTRNVHSRIASSQSKLLDACIT 445
Query: 67 FVSDFDTPSGGSSKKKNISVLD-IGRPFSPSMFEAVLKNFTPD-VPNSISGRPR------ 118
FD + SKK+ SV D I + +V+ PD +IS P+
Sbjct: 446 IYKQFDRENFLESKKRQQSVEDEIEDNEKTPTYGSVIDAINPDEFYRTISTIPKFKDLQW 505
Query: 119 --QEDAQEFLSFIMDQMHDELL---------KLQGESTSINGA----------------- 150
QEDA+EFL+ ++DQ+H+EL+ ++Q SIN
Sbjct: 506 GQQEDAEEFLTHLLDQLHEELVASINLLSENEIQNILQSINDQELKVFFIRNLSRFKKSE 565
Query: 151 --NTALVSLAE-------------EDEWETVG------PKNKSAVTRTQSFLPSALSDIF 189
N A V L E ED W V KNK+A RT +PS +S +F
Sbjct: 566 FLNNASVQLQELISKYGNASEENEEDGWHEVSSSGKRSKKNKTAAKRTVEVIPSPISKLF 625
Query: 190 GGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
GGQ +SV+ NK S T+ PF + LDI +V +E A + FS E L +RTSS
Sbjct: 626 GGQFRSVLDIPNNKERQSITLDPFQTIQLDISDSSVIDLEGAFKKFSEFE-LIPFRTSSG 684
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GST--------------KLHKSVRFP 292
+ V AKK I L ++L++ L RFS+ S G + K+ K + +
Sbjct: 685 TD---VEAKKQTFIDKLPEVLLIQLKRFSFVSNVGKSNDMTNYNAYNGRIEKIRKKINYG 741
Query: 293 LQLVLGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVT 350
+L++ + + + + R+Y L + HHG P GHYTAD + + +W DD ++
Sbjct: 742 HELIIPSESVSSNATMSNREYSLTGVIYHHGLSPDGGHYTADVLHSESKKWYRIDDVNIN 801
Query: 351 AIGTSKVLH--------DQAYVLFYKQ 369
+ VL AY+L Y++
Sbjct: 802 ELEEDDVLKGGEEDNDSRTAYILMYQK 828
>gi|353236272|emb|CCA68270.1| related to Ubiquitin carboxyl-terminal hydrolase 10 [Piriformospora
indica DSM 11827]
Length = 814
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 201/435 (46%), Gaps = 103/435 (23%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQE-----LRTRDIPKAGYPTLTAFVGFV 68
++PRGL+N+GNLCF NA LQAL+ PF +L + L + +A P + A + F+
Sbjct: 403 IVPRGLVNTGNLCFANAILQALVYTPPFWKLFNDIAATGLTAQRTGRAATPMVDATIAFL 462
Query: 69 SDFDT------------PSGGSSKKKNISVLDIGRPFSPSMFEAVLKN-FTP-DVPNSIS 114
++F P+ ++ + I +P S + +N FT ++ NS+
Sbjct: 463 NEFKPAFTPIPVDLSAFPTAQAAASMSTPKPAINKPTSSRDSNILPRNSFTASELYNSLK 522
Query: 115 GRP--------RQEDAQEFLSFIMDQMHDEL---LKLQGESTS----------INGANTA 153
+P QEDA+EFL F +D +H+EL L G+S I+ A
Sbjct: 523 SKPTFDGMRLGHQEDAEEFLGFFLDALHEELCGLLNALGDSAQADAVKDSDRDIDKLEPA 582
Query: 154 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 213
+ + + DEW+ VG +N++ VTRT SA++ IFGG+ +S+++A G SA+V+ +
Sbjct: 583 IDVVQDGDEWQEVGRRNRATVTRTTQGTESAITAIFGGKFRSLLRASGRPDSASVEEWRC 642
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENL-----EGYRTSSTGNAGVVTAKKSVKIQTLSKIL 268
L LDI + +IEDAL SA E + +GY + +T K + ++ L IL
Sbjct: 643 LQLDIQPPHIRSIEDALYALSAVETVTIQSHQGYPSEAT---------KQMFVEHLPPIL 693
Query: 269 ILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE---GRKYELVATVTHHGRDP 325
ILHL RF Y Q G ++L S RKY+L V HHG
Sbjct: 694 ILHLKRFIYDPQ----------------TGIEMLSAASKHRPFSRKYQLYGVVYHHGLAA 737
Query: 326 SKGHYTADARY---------------FNDQWLHFDDASVTAIGTSKVL------------ 358
+ GHYT + + + W+ FDD +V + V
Sbjct: 738 TGGHYTLEVLHPTANAYMPARDHSSNSTEGWMRFDDETVRLLTPDDVFGSQAQPTHHGWA 797
Query: 359 -HDQ--AYVLFYKQV 370
HD+ AY+LFY++V
Sbjct: 798 GHDERVAYILFYRRV 812
>gi|328850830|gb|EGF99990.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 659
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 190/405 (46%), Gaps = 47/405 (11%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR---TRDIPKAGYPTLTAFV 65
K V ++PRGLIN+GN+CF NA LQ L+ C PF LL+ L T D K+ P L A +
Sbjct: 258 KHVPFIVPRGLINNGNICFANAILQVLVYCVPFYNLLKHLSLYTTHDF-KSQTPLLDAMI 316
Query: 66 GFVSDFDT-PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---VPNSISGR----- 116
GF+++F++ P K+ ++ R P+ + + + F + + ++ R
Sbjct: 317 GFINEFESIPLSELEPIKDPKTSNVLRYHLPTYLKKIGEPFIAESVWIATKVNSRFDAMR 376
Query: 117 -PRQEDAQEFLSFIMDQMHDELL--------------KLQGESTSINGANTALVSLAEE- 160
+QEDAQ+FL F +D +H++LL +L G + + + + A E
Sbjct: 377 GGQQEDAQKFLCFFLDTLHEKLLSAIERHDGLIRLRQQLAGAAPNATNKDNLIKPPANEL 436
Query: 161 -------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLL 213
D W VG K + +VTR+ + S L+ IFG +S++ K S T +P +
Sbjct: 437 DQPNPSSDGWMEVGSKGRPSVTRSTDSISSPLTSIFGFNTRSILHKPKQKDSVTFEPNNM 496
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
L L I S + TIE+AL FS PE + T N +A K + I++ + ILH
Sbjct: 497 LQLSIESPNIKTIEEALLNFSTPEIISDMMTK---NGIKSSATKQIFIESFPPVFILHSK 553
Query: 274 RFSYGSQGSTKLHKSVRFPLQLVLGRDLL-VTPSAEGRKYELVATVTHHGRDPSKGHYTA 332
RF Y K KS++F L + + T E Y+L A V HHG S GHYT
Sbjct: 554 RFGYFEGEVKKNSKSIKFGNLLKIPASVRGSTQRTEEVSYKLFAVVYHHGLMASGGHYTV 613
Query: 333 DAR-YFNDQWLHFDDASVT----AIGTSKVLHD--QAYVLFYKQV 370
+ D W++FDD + A D YVLFY +
Sbjct: 614 SIKQQVTDDWIYFDDTMIKDHHQAFPNEDFHQDLKTPYVLFYTRC 658
>gi|357627999|gb|EHJ77487.1| hypothetical protein KGM_16487 [Danaus plexippus]
Length = 1123
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 199/392 (50%), Gaps = 47/392 (11%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLT 62
N PV L PRGL N N C++NA LQAL++C PF +L+ L +TR K+ P +
Sbjct: 738 NRPV----SLTPRGLTNHSNYCYVNAILQALIACPPFYNMLKALPYQTRRG-KSSTPVID 792
Query: 63 AFVGFVSDFDT-PSG-----GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 116
+ V F PS G S + P S VL+ P P S G
Sbjct: 793 SMVELCYAFGPLPSANRRGRGESGASGAPAVPAMSPLDGSAGLRVLRALRP-FPGSQEG- 850
Query: 117 PRQEDAQEFLSFIMDQMHDELLKL-----QGESTSINGANTALVSLAE-------EDEWE 164
RQEDA+EFL +++ ++DE+L+L E +NG +V+ + +DEW+
Sbjct: 851 -RQEDAEEFLGCLLNSLNDEMLELIKLVEPEEPKDLNGKPNGIVAQEQPPDEDNDDDEWK 909
Query: 165 TVGPKNKSAVTRTQSFLPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAV 223
+GP+N+ AV R + + ++DIF G+ + + +A + + VQPF L LDI E
Sbjct: 910 VMGPRNRGAVERRWAARRTPVADIFRGRTRLRLHRAPNHDVTDAVQPFFTLQLDI--ERS 967
Query: 224 HTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
T++DAL L + + LE GV A + + ++ L +L+LHL F S+G T
Sbjct: 968 TTVKDALELLAGKDTLE----------GVSDAWQQLSLEQLPVVLLLHLKCFQLDSEGHT 1017
Query: 284 -KLHKSVRFPLQLVLGRDLLVTP-SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 341
K+ K++ FP+ L + ++ + + + R Y+L A V H G + KGHY D + W
Sbjct: 1018 AKIVKNIDFPIDLKIDPKIISSKHTTKQRLYKLFAVVYHEGVEAVKGHYLTDTFHGQVGW 1077
Query: 342 LHFDDASVTAIGTSKVLHDQ----AYVLFYKQ 369
+ +DD++VT + ++VL + Y+L Y++
Sbjct: 1078 IRYDDSTVTQVTDAQVLKPKPPRMPYLLMYRR 1109
>gi|68491385|ref|XP_710490.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
gi|46431699|gb|EAK91232.1| hypothetical protein CaO19.6319 [Candida albicans SC5314]
Length = 482
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 187/405 (46%), Gaps = 76/405 (18%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 69
D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 107 DIKPRGLTNTGNICYMNSILQILIHCEPFNRLLKLIETKSIGSLGPSSTPLLDATIIFFN 166
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
F G+ SP F A L S +QEDA+EFL +
Sbjct: 167 QFQENVKGA--------------ISPESFYASLTKLDK---FSHLKWGQQEDAEEFLGYY 209
Query: 130 MDQMHDELL------------------------------KLQGESTSINGANTALVSLAE 159
+D +++E L K +ST N A A+
Sbjct: 210 LDGLNEEFLGAIKQLNTPQIDSLIQVYAQDHDAEATAKFKFNVKSTIKRIKNDAE---AD 266
Query: 160 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLH 215
+ EW V K S T+ + P+ L+ IFGG+ KSVV ++ + S T+ PF +
Sbjct: 267 DGEWNQVNKKKNSTTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDPFQHVQ 325
Query: 216 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 275
LD+ S TIEDA++ + E++ S T N + KK I+ L +LI+HL RF
Sbjct: 326 LDVSS--ADTIEDAIKHLNESESI-----SYTNNNKEIQVKKQTFIEKLPNVLIIHLKRF 378
Query: 276 SYGSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTA 332
SY G KL K V + L++ ++++ + KY+LV+ V HHG GHYT+
Sbjct: 379 SYLKDQEIGVEKLRKKVDYNHDLIIPKEVMARDTGMPIKYQLVSVVYHHGSSADAGHYTS 438
Query: 333 DARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 370
D Y QW DD +V I +VL+ AY+L Y+++
Sbjct: 439 DI-YNAGQWWRIDDTAVKQIQNEEVLNAGTEENIKNAYILLYRRI 482
>gi|321264227|ref|XP_003196831.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317463308|gb|ADV25044.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1089
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 133/434 (30%), Positives = 206/434 (47%), Gaps = 85/434 (19%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSD 70
++PRGLIN+GN+CF N LQ L+ C PF +L +E R D+ + P L A + F+ +
Sbjct: 663 MVPRGLINTGNMCFANTILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIIFLRE 721
Query: 71 F------DTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
F T + + K K F P ++++A+ +N D S+ R QEDA+
Sbjct: 722 FVSSPESSTSTTSTPKGKGKDKDSRKEAFIPENVYDAMKENKRFD---SMR-RGYQEDAE 777
Query: 124 EFLSFIMDQMHDELLKL------------QGESTS---------INGANTALVSLAEEDE 162
E+L F ++ +H+E++ L G+S+ I+ A +
Sbjct: 778 EYLGFFLNTLHEEIIYLLSRTSTTSSSIPNGQSSDPSSRKIERPISPGAGANGNADSSSG 837
Query: 163 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
W VG K K+ V R S++S +FGG+L+S++ G K S T++P+ L LDI
Sbjct: 838 WLEVGKKQKTHVVRATESRESSVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITGAT 897
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-- 280
+ +I DALR S PE + G +++ G G V A K+V ++T K+LI HL RF Y ++
Sbjct: 898 ILSITDALRAISTPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTEEG 955
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTAD-AR- 335
G K K+V + + L++ ++ ++P+ KY L V HHG S GHYT AR
Sbjct: 956 GVVKRSKAVAYGVDLMIPNEI-ISPARRTSSPIKYALFGVVYHHGSSASGGHYTVSVARP 1014
Query: 336 ----------------------YFNDQWLHFDDASVTAIGTSKVL--HDQ---------- 361
+WLHFDD +V + V+ DQ
Sbjct: 1015 SLSSSASSTPAGTSISTSSSSTTMATRWLHFDDENVREVREEDVVVSLDQAKGGESGLVG 1074
Query: 362 -----AYVLFYKQV 370
AY+LFY++V
Sbjct: 1075 GRERCAYLLFYRRV 1088
>gi|389748481|gb|EIM89658.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 1043
Score = 164 bits (414), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 143/442 (32%), Positives = 216/442 (48%), Gaps = 91/442 (20%)
Query: 2 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT- 60
KA ++P K + PRGL+NSGN+CF NA LQ L+ C PF +L+ EL + +P++ PT
Sbjct: 614 KAASQPPK----IRPRGLVNSGNMCFANAVLQLLVYCPPFWKLMTEL-GKLLPESQGPTP 668
Query: 61 -----------------------LTAFVGFVSDFDT-----------PSGGSSKKKNISV 86
+ A + F+ +F P+G K+
Sbjct: 669 GQASGTATPVNGVKVHEEGDTPLVDATIRFLKEFGPVEPKEKEKERRPNGYGKGKERREQ 728
Query: 87 LDIGR-----PFSPS-MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKL 140
D G F P+ +++A+ + D N G QEDA+EF F +D + +L
Sbjct: 729 EDEGEGDGLDSFMPTYVYDAMKEKKRFD--NMRGGH--QEDAEEFFGFYLDTL---EEEL 781
Query: 141 QGESTSINGANTA----LVSLAE-------EDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
++IN + A V++ E E+ W VG KNKS VTRT S ++ IF
Sbjct: 782 LSLLSAINPPSKAEKEKPVNIEEKVEEPPQEEGWMEVGKKNKSVVTRTVKSTESPITRIF 841
Query: 190 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
GG+ +S ++A G + S V+ + L LDI E+VHTI+DAL S P++++ T+ST
Sbjct: 842 GGKFRSTLRAPGQRDSVMVEDWRSLQLDIQPESVHTIKDALARISIPQSVQ--VTNSTTR 899
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLVLGRDLL----- 302
V A + + I+ L +IL+LHL RF Y ++G KL K V F +L +G DL+
Sbjct: 900 V-PVEASQQILIEALPRILVLHLKRFLYDVDAKGVVKLGKMVEFGPELDIGSDLMAPGKK 958
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN--------DQWLHFDDASVTAIGT 354
V P A +Y+L + HHG S GHYT D + N + W+ DD V+ +
Sbjct: 959 VGPPA---RYQLYGVLYHHGLSASGGHYTLDVLHPNRDGGVKPREGWIRIDDELVSDVRQ 1015
Query: 355 SKVLH--DQ----AYVLFYKQV 370
V D+ AY+LFY+++
Sbjct: 1016 EDVFSGLDRDDRCAYLLFYRRL 1037
>gi|58260736|ref|XP_567778.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|57229859|gb|AAW46261.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1099
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 203/444 (45%), Gaps = 95/444 (21%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSD 70
++PRGLIN+GN+CF N LQ L+ C PF +L +E R D+ + P L A + F+ +
Sbjct: 663 MVPRGLINTGNMCFANTILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIIFLRE 721
Query: 71 F------DTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
F T + + K K F P ++++A+ +N D R QEDA+
Sbjct: 722 FVSSPESSTSTTSTPKGKGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAE 777
Query: 124 EFLSFIMDQMHDELLKL----------------------QGESTSINGANTALVSLAEED 161
E+L F ++ +H+E++ L Q E A + A+
Sbjct: 778 EYLGFFLNTLHEEIIYLLSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSS 837
Query: 162 E-WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
W VG K K+ V R SA+S +FGG+L+S++ G K S T++P+ L LDI
Sbjct: 838 SGWLEVGKKQKTHVVRATESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITG 897
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 280
A+ +I DALR S PE + G +++ G G V A K+V ++T K+LI HL RF Y ++
Sbjct: 898 PAILSITDALRAISTPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTE 955
Query: 281 --GSTKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTAD-A 334
G K K+V + + L + + +++P ++ KY L V HHG S GHYT A
Sbjct: 956 EGGVVKRSKAVAYGVDLAIPNE-IISPARRTSTSIKYALFGVVYHHGSSASGGHYTVSVA 1014
Query: 335 R-------------------------------YFNDQWLHFDDASVTAIGTSKVL--HDQ 361
R +WLHFDD +V + V+ DQ
Sbjct: 1015 RPSSSSSSSTSSTSIQSPAGTSSSLPPPPSSTTIASRWLHFDDENVREVREEDVVVSLDQ 1074
Query: 362 ---------------AYVLFYKQV 370
AY+LFYK+V
Sbjct: 1075 AKGGETGSVGGRERCAYLLFYKRV 1098
>gi|134117471|ref|XP_772629.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255246|gb|EAL17982.1| hypothetical protein CNBK3330 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1092
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 135/444 (30%), Positives = 202/444 (45%), Gaps = 95/444 (21%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSD 70
++PRGLIN+GN+CF N LQ L+ C PF +L +E R D+ + P L A + F+ +
Sbjct: 656 MVPRGLINTGNMCFANTILQVLVYCPPFTELFEEFGKRLKADLARK-TPLLEAMIIFLRE 714
Query: 71 F------DTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
F T + + K K F P ++++A+ +N D R QEDA+
Sbjct: 715 FVSSPESSTSTTSTPKGKGKDKDSRKEAFIPENVYDAMKENKRFDS----MRRGYQEDAE 770
Query: 124 EFLSFIMDQMHDELLKL----------------------QGESTSINGANTALVSLAEED 161
E+L F ++ +H+E++ L Q E A + A+
Sbjct: 771 EYLGFFLNTLHEEIIYLLSQTSTTSSSMPNGQPSDSSSRQVERPVSPRAGAGINGNADSS 830
Query: 162 E-WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
W VG K K+ V R SA+S +FGG+L+S++ G K S T++P+ L LDI
Sbjct: 831 SGWLEVGKKQKTHVVRATESRESAVSRLFGGKLRSILHTPGQKDSVTIEPYQPLQLDITG 890
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 280
A+ +I DALR S PE + G +++ G G V A K+V ++T K+LI HL RF Y ++
Sbjct: 891 PAILSITDALRAISTPEIIHGVYSAAKG--GEVDATKTVYVETWPKVLICHLKRFVYDTE 948
Query: 281 --GSTKLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTAD-A 334
G K K+V + + L + + +++P+ KY L V HHG S GHYT A
Sbjct: 949 EGGVVKRSKAVAYGVDLAIPNE-IISPARRTSTPIKYALFGVVYHHGSSASGGHYTVSVA 1007
Query: 335 R-------------------------------YFNDQWLHFDDASVTAIGTSKVL--HDQ 361
R +WLHFDD +V + V+ DQ
Sbjct: 1008 RPSSSSSSSTSSTSIQSPAGTSSSLPPPSSSTTIASRWLHFDDENVREVREEDVVVSLDQ 1067
Query: 362 ---------------AYVLFYKQV 370
AY+LFYK+V
Sbjct: 1068 AKGGETGSVGGRERCAYLLFYKRV 1091
>gi|241956180|ref|XP_002420810.1| ubiquitin carboxyl-terminal hydrolase, putative; ubiquitin
thioesterase, putative [Candida dubliniensis CD36]
gi|223644153|emb|CAX40960.1| ubiquitin carboxyl-terminal hydrolase, putative [Candida
dubliniensis CD36]
Length = 639
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/404 (30%), Positives = 188/404 (46%), Gaps = 73/404 (18%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVS 69
D+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + T+ I G P L A + F +
Sbjct: 263 DIKPRGLTNTGNICYMNSILQILIHCDPFSRLLKLIETKSIGSLGPSSTPLLDATIAFFN 322
Query: 70 DF-DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
F DT G S PF + + L F S +QEDA+EFL +
Sbjct: 323 QFQDTSKGAVS----------AEPFYTHLTK--LDKF------SHLKWGQQEDAEEFLGY 364
Query: 129 IMDQMHDELLK-------------LQGESTSINGANTALVSL------------AEED-- 161
+D +++E L +Q + + A ++D
Sbjct: 365 YLDALNEEFLAAIKQLNTPQVDSLIQAYAQDHDAEAVATFKFNVKSTIKRIKNDTDQDTD 424
Query: 162 -EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKASATVQPFLLLHL 216
EW V K S+ T+ + P+ L+ IFGG+ KSVV ++ + S T+ PF + L
Sbjct: 425 GEWSQVNKKKNSSTTKIE-IDPTPLNMIFGGEFKSVVTIPKQSSSFQKSITLDPFQHVQL 483
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S V TIEDA + + E + S T N + KK I+ +LI+HL RFS
Sbjct: 484 DISS--VDTIEDAFKHLNESEII-----SYTNNNKEIQVKKQTFIEKFPNVLIIHLKRFS 536
Query: 277 YGSQ---GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTAD 333
Y G KL K V + L++ ++++ + +Y+LV+ V HHG GHYT+D
Sbjct: 537 YLKDHEIGVEKLRKKVDYNHDLIIPKEVMAKDTGVPIRYQLVSVVYHHGSSADAGHYTSD 596
Query: 334 ARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 370
Y QW DD +V I +VL+ AY+L Y+++
Sbjct: 597 I-YNVGQWWRIDDTAVKQINNEEVLNAGTEENIKNAYILLYRRI 639
>gi|169594854|ref|XP_001790851.1| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
gi|160700955|gb|EAT91651.2| hypothetical protein SNOG_00156 [Phaeosphaeria nodorum SN15]
Length = 862
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 121/373 (32%), Positives = 186/373 (49%), Gaps = 45/373 (12%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVG 66
K V L PRGLI LQ L+ C PF L ++ R + K+ P + A +
Sbjct: 411 KKVTFLEPRGLI-----------LQVLLFCVPFYDFLDQVAKRAVHSFKSETPLVDALIM 459
Query: 67 FVSDFD-TPSGGSSKKKNISVLD-----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
F+ DF S + +K + + D G P +P V++ P N G+ QE
Sbjct: 460 FMRDFKLIDSAATVEKLRLRLKDKELEQYGDPLTPEYVYDVIRRL-PRFDNMKRGQ--QE 516
Query: 121 DAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSLAE--EDEWETVGPKNKSAVT 175
DA+EFL F++ +HDE ++K ++ NG + +E + W VG K KSA T
Sbjct: 517 DAEEFLGFLLAGLHDEAAHIIKSDKQNQVSNGVTSPSAEQSESVDGGWMEVGAKQKSANT 576
Query: 176 RTQSFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLF 233
++ + + ++ IFGG+L+S K G KAS T++P+ L LDI ++ I DAL+
Sbjct: 577 QSSGAIEFETPITKIFGGKLRSEYKKPGEKASVTLEPYQPLQLDIGEPNINNISDALKNL 636
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ E L+G G + K V I++L +LILHL RF Y +QG K+ K V +PL
Sbjct: 637 TRLETLDG------AVRGARASTKQVHIESLPPVLILHLKRFHYDAQGPQKIWKKVGYPL 690
Query: 294 QLVLGRDLL--------VTPSAEGRKYELVATVTHHGRDPSKGHYTAD-ARYFNDQWLHF 344
+L + +++ +T A R Y L++ V HHG++ S GHYT D R ++W+
Sbjct: 691 ELEIPKEVFPPHKRNSYMTHGAFPR-YRLISVVYHHGKNASGGHYTVDLRRQEGNEWIRM 749
Query: 345 DDASVTAIGTSKV 357
DD ++ I V
Sbjct: 750 DDTTLRRIRAEDV 762
>gi|403413792|emb|CCM00492.1| predicted protein [Fibroporia radiculosa]
Length = 877
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 136/395 (34%), Positives = 197/395 (49%), Gaps = 50/395 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIPKAG--------YPTLTAF 64
+ PRGL+N+GN+CF NA LQ L+ C PF +LL EL + P G P + A
Sbjct: 487 IQPRGLVNTGNMCFANAVLQILVYCPPFHRLLTELSKYLSGPVVGPQKEGTRATPLIDAT 546
Query: 65 VGFVSDFDTPSGGSSKKKNISVLD-IGRP--FSPS-MFEAVL--KNFTPDVPNSISGRPR 118
+ F+ +F S K K D P F P+ +++A+ K F + I G
Sbjct: 547 IQFMKEFVPESSLDKKAKGKERDDDFYEPESFIPTYVYDAMKEKKRFA----SMIGGH-- 600
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE-WETVGPKNKSAVTRT 177
QEDA+EFL F +D + +ELL L S + ++D+ W VG KN+S VTRT
Sbjct: 601 QEDAEEFLGFYLDTLEEELLSLSSSLLSKTPPKVDEEPVPQQDDGWYEVGKKNRSVVTRT 660
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
S+++ IFGG+ +S ++A K S TV+ + L LDI E VH+I+DAL+ S P+
Sbjct: 661 TKSTESSITRIFGGKFRSTLRAPHQKDSITVEDWRSLRLDIQREQVHSIKDALQHISHPQ 720
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 297
++ + + G VV A + I+ L +LILHL RF Y T + V+ Q+
Sbjct: 721 PVQISQPTRPGV--VVEAAQQALIEALPSVLILHLKRFLY----DTNVGDVVKIGKQVTY 774
Query: 298 GRDLLVTPS--AEGR------KYELVATVTHHGRDPSKGHYTADARYFN--------DQW 341
G +L ++P A R KY+L + HHG S GHYT D + N W
Sbjct: 775 GPELDISPDLMAPTRRTTYPIKYQLFGVLYHHGSSASGGHYTLDVLHPNRDLSDRPRSAW 834
Query: 342 LHFDDASVTAI------GTSKVLHDQAYVLFYKQV 370
+ DD V+ I G+S AY+LFY++V
Sbjct: 835 IRIDDELVSDIRPDDVFGSSDRDDRCAYLLFYRRV 869
>gi|261193134|ref|XP_002622973.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
gi|239589108|gb|EEQ71751.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis SLH14081]
Length = 907
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 186/372 (50%), Gaps = 50/372 (13%)
Query: 14 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 66
+ PRGL+N+GN+C++N+ L L + PF + ++E R D T+
Sbjct: 446 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVID-------AATSVEK 498
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
K+N L G F P V+++ P + G Q+DAQEFL
Sbjct: 499 LRLRL---------KQNELEL-YGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 545
Query: 127 SFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQ 178
F+++++HDE + ++TS VS E + W VG K K A+TR+
Sbjct: 546 GFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRSS 605
Query: 179 SFLP--SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+ + P
Sbjct: 606 GHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKP 665
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQ 294
E ++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V +PL+
Sbjct: 666 ETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLE 723
Query: 295 LVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFD 345
L L ++ SA+G KY L + HHG++ S GHYT D R + +W+ D
Sbjct: 724 LELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLD 783
Query: 346 DASVTAIGTSKV 357
D + + + V
Sbjct: 784 DTVIRRVRSEDV 795
>gi|239613681|gb|EEQ90668.1| ubiquitin C-terminal hydrolase [Ajellomyces dermatitidis ER-3]
Length = 906
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 186/372 (50%), Gaps = 50/372 (13%)
Query: 14 LLPRGLINSGNLCFLNA------TLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVG 66
+ PRGL+N+GN+C++N+ L L + PF + ++E R D T+
Sbjct: 445 IEPRGLLNTGNMCYMNSISLPLLLLPLLTAIPPFRIMFMREFRVID-------AATSVEK 497
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
K+N L G F P V+++ P + G Q+DAQEFL
Sbjct: 498 LRLRL---------KQNELEL-YGESFIPEYVYQVIRHL-PRFRDMRRGH--QQDAQEFL 544
Query: 127 SFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVGPKNKSAVTRTQ 178
F+++++HDE + ++TS VS E + W VG K K A+TR+
Sbjct: 545 GFLLEELHDECTQAVKQATSTASDISTAVEADFVSATSEPSVEGWLEVGHKQKPAITRSS 604
Query: 179 SFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ S ++ IFGG+L+S + GNK S T++P+ L LDI S V+ I DAL+ + P
Sbjct: 605 GHISAESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKP 664
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQ 294
E ++G SS G VTA K V I++L +LILHL RF Y ++G+ K+ K V +PL+
Sbjct: 665 ETMQGDFNSSRGPK--VTATKQVFIESLPPVLILHLKRFQYDNVTKGTQKIWKKVGYPLE 722
Query: 295 LVLGRDLLVTP-----SAEGR---KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFD 345
L L ++ SA+G KY L + HHG++ S GHYT D R + +W+ D
Sbjct: 723 LELPKEAFPPHRRNIISAQGSGLPKYRLTGVIYHHGKNASGGHYTVDVRRQDGREWIRLD 782
Query: 346 DASVTAIGTSKV 357
D + + + V
Sbjct: 783 DTVIRRVRSEDV 794
>gi|294654613|ref|XP_456675.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
gi|199429014|emb|CAG84631.2| DEHA2A07942p [Debaryomyces hansenii CBS767]
Length = 876
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 135/467 (28%), Positives = 200/467 (42%), Gaps = 125/467 (26%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPT 60
N P+ VK PRGL N+GN+C++NA LQ L+ C PF + L+ + ++ I K+ P
Sbjct: 434 NCPIFRVK---PRGLTNTGNICYMNAILQVLLYCEPFNKTLKLVESKSIGSLSQKSTTPL 490
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
L + F +F PS +P SP F L T + + + +QE
Sbjct: 491 LDIVIKFWKEFSQPSSM-------------KPISPDNFYMSL--ITHEKFSHLKWG-QQE 534
Query: 121 DAQEFLSFIMDQMHDEL-----------------------------------------LK 139
DA+EFL + +D +H+E +K
Sbjct: 535 DAEEFLGYFLDGLHEEFVGSIKGLNTPQTDLLIQQFQQQNEDIDQLKLNAFKLNIKNTMK 594
Query: 140 LQGESTSINGANT--ALVSLAEEDEWETVGPKNKS-AVTRTQSFLPSALSDIFGGQLKSV 196
+ +S S N T VS E + W VG NK + RT PS ++ IFGGQ +SV
Sbjct: 595 IIKKSKSENQDTTHQEEVSDHESNGWSEVGSNNKKISAKRTVEIEPSPITTIFGGQFRSV 654
Query: 197 VKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
++ NK S T+ PF + LDI ++ T+EDA + + PEN+ Y++SS V
Sbjct: 655 LQIPKNKESQSITLDPFQCIQLDISDSSITTVEDAFKQLNEPENI-PYKSSSNKE---VI 710
Query: 255 AKKSVKIQTLSKILILHLMRFSY------------------GSQGS------TKLHKSVR 290
AKK I L ILI+HL RFSY S GS KL K +
Sbjct: 711 AKKQTFIDQLPNILIIHLKRFSYQQEKEKESTPSNEQSSNTSSNGSRPLGSIEKLRKKIE 770
Query: 291 FPLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADA----------- 334
+ L + ++L +P + Y+L V HHG GHYT+D
Sbjct: 771 YSHHLTIPNEVL-SPLYKHSGNISNHYKLFGVVYHHGVSAEGGHYTSDVLRKSSVFDNEE 829
Query: 335 ----RYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 370
+ ++QW+ DD +T + +VL+ AY+LFY++
Sbjct: 830 ESNDKKVDNQWIRIDDTQITELEKDEVLNGGDEETTKNAYILFYQKT 876
>gi|46137553|ref|XP_390468.1| hypothetical protein FG10292.1 [Gibberella zeae PH-1]
Length = 927
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 187/365 (51%), Gaps = 44/365 (12%)
Query: 14 LLPRGLINSGNLCFLNA-TLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
L PRGLIN+GN+C++N+ + +A+ S K+ P + A + F+ +F
Sbjct: 501 LEPRGLINTGNMCYMNSISKRAVHSF----------------KSDTPLIDAMIMFMHEFK 544
Query: 73 TPSGGSSKK------KNISVLDIGRPFSPS-MFEAVLKNFTPDVPNSIS-GRPRQEDAQE 124
T + + KN + G PF+P ++EA+ + +P S R Q+DA+E
Sbjct: 545 TIKSAAGVEPLRLALKNEELERYGEPFTPEFVYEAIRQ-----LPRFASMRRGHQQDAEE 599
Query: 125 FLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
FL F++ + DE + T + +A D+W VG K KSAV+R+
Sbjct: 600 FLGFLLQSLDDECTTVLKNFTPDEAEHQLSAGSDAGGADDWLEVGRKQKSAVSRSSGSNS 659
Query: 183 SALSD-IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 241
S+ IFGG L+S + G K S T +P+ L LDI S V + DALR + PE L+G
Sbjct: 660 SSPISRIFGGLLRSEFRVPGLKDSITTEPYQPLQLDIGSSDVRNVVDALRGLTRPERLQG 719
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 299
S G VTA K V I++L +LILHL RF + ++ G+ K+ K + +PL+L + R
Sbjct: 720 DFNSPRGKE--VTATKQVFIESLPPVLILHLKRFQFDAEGNGTVKIWKKIGYPLELEIPR 777
Query: 300 DLLV-----TPSAEG-RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAI 352
+ L T EG KY+L++ V HHG++ S GHYT D R +W+ DD S+ +
Sbjct: 778 EALSRQKRQTLGEEGMPKYKLISVVYHHGKNASGGHYTVDVRRQEGREWIRIDDTSIRRV 837
Query: 353 GTSKV 357
+ V
Sbjct: 838 RSEDV 842
>gi|238489993|ref|XP_002376234.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
gi|220698622|gb|EED54962.1| ubiquitin C-terminal hydrolase, putative [Aspergillus flavus
NRRL3357]
Length = 411
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 150/266 (56%), Gaps = 31/266 (11%)
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQGE--STSINGANTALVSLAEE---------DEWE 164
R Q+DAQEFL F++++MH+E + + ST +GA SL+EE D W
Sbjct: 52 RGHQQDAQEFLGFLLEEMHEECARAAKDAPSTKTDGA----ASLSEEPSAADDESGDGWL 107
Query: 165 TVGPKNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
VG K K AVTR+ + S + IFGGQ++S K GNK S T++P+ L LDI S
Sbjct: 108 EVGHKQKPAVTRSSGHMSYESPIMRIFGGQIRSEFKVPGNKTSVTLEPYQPLQLDIGSPE 167
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 280
++ I DAL+ + PE+++G SS G VTA K + I+ L +LILHL RF Y S +
Sbjct: 168 INNIVDALKGLTKPESIQGDFNSSRGPN--VTATKQIFIENLPPVLILHLKRFQYDSVTR 225
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPS------AEGR--KYELVATVTHHGRDPSKGHYTA 332
G+ K+ K V +PL L + R++L P+ A+G KY L+ + HHG++ S GHYT
Sbjct: 226 GTQKIWKKVGYPLDLEIPREVL-PPNRRNIMMAQGGLPKYRLIGVIYHHGKNASGGHYTV 284
Query: 333 DARYFND-QWLHFDDASVTAIGTSKV 357
D R + +W+ DD + + + V
Sbjct: 285 DVRRQDGREWIRLDDTVIRRVRSEDV 310
>gi|302510725|ref|XP_003017314.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
gi|291180885|gb|EFE36669.1| hypothetical protein ARB_04194 [Arthroderma benhamiae CBS 112371]
Length = 837
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 184/371 (49%), Gaps = 51/371 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L PRGL+N+GN+C++N+ + R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
SS + K + + G F P V+++ R ++DAQEFL
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469
Query: 128 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT-- 177
F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 295
+ G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647
Query: 296 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+ R+ L + KY L+ + HHG+ S GHYT + R + +W+ FDD
Sbjct: 648 EIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDD 707
Query: 347 ASVTAIGTSKV 357
+ + + +V
Sbjct: 708 TYIRRVRSEEV 718
>gi|302656314|ref|XP_003019911.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
gi|291183687|gb|EFE39287.1| hypothetical protein TRV_06012 [Trichophyton verrucosum HKI 0517]
Length = 837
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 184/371 (49%), Gaps = 51/371 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L PRGL+N+GN+C++N+ + R K+ P + A + F+ +F
Sbjct: 372 LEPRGLVNTGNMCYMNSIGR---------------RAAHSFKSDSPLVDAMIMFLREFRV 416
Query: 74 PSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
SS + K + + G F P V+++ R ++DAQEFL
Sbjct: 417 IDAASSVEKLRLRLKQNELEEYGESFIPEYVYQVIRHLP-------RFRDMRQDAQEFLG 469
Query: 128 FIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT-- 177
F+++++HDE L + +S ++ S+A++ D W VG K K++VTR+
Sbjct: 470 FLLEELHDECLLATKNAMADKSDVSTSSDVDAHSIADDSTGDGWLEVGHKQKASVTRSSG 529
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
S S ++ IF G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE
Sbjct: 530 DSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPE 589
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQL 295
+ G SS G V A K V I+ L +LILHL RF Y + G+ K+ K + +PL+L
Sbjct: 590 TMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQKIWKKIGYPLEL 647
Query: 296 VLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDD 346
+ R+ L + KY L+ + HHG+ S GHYT + R + +W+ FDD
Sbjct: 648 EIPKEVFPPHRRNALSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDD 707
Query: 347 ASVTAIGTSKV 357
+ + + +V
Sbjct: 708 TYIRRVRSEEV 718
>gi|406607793|emb|CCH40898.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 869
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/428 (27%), Positives = 191/428 (44%), Gaps = 92/428 (21%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 69
++PRGL+N+GN+CF+++ LQ L+ C PF ++L + R I + P + A + F
Sbjct: 463 IIPRGLVNTGNICFMSSILQLLLYCQPFYKILNVISIRTIHSINGTSSTPLIDALIEFYK 522
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PRQEDAQ 123
+F+ KK G P F + S++ R +QEDA+
Sbjct: 523 NFNIKLDNPDKK-------FGDSLVPEEFYKKI---------SLNERFQHLKWGQQEDAE 566
Query: 124 EFLSFIMDQMHDELLK--------------------------------------LQGEST 145
EF +++D +H+E + + +
Sbjct: 567 EFFGYLLDGLHEEFISSVKSIKPTETKTLIDSITTEDVRQSIRQSLKQFSDDDDFKSSNE 626
Query: 146 SINGANTALVSLAEEDEWETVGP-KNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGN 202
S G N+ +L +D W VG KNK + RT PS + +FGGQ +S+ + Q
Sbjct: 627 SNGGINSTSNNLTSDDGWHEVGSTKNKISAKRTVEVKPSPIRQLFGGQFRSILDIPKQRE 686
Query: 203 KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQ 262
S T+ PF + LDI ++++T+EDA + S N+E S + V+ AKK I
Sbjct: 687 SQSITLDPFQQIQLDISDDSINTLEDAFKNIS---NIEEIPYKSNDGSEVI-AKKQTFID 742
Query: 263 TLSKILILHLMRFSYGSQGSTKLH-------KSVRFPLQLVLGRDLLVTPSAE-----GR 310
L ++L++HL RFS+ S+ + +L+ K + + +L + + +++PS
Sbjct: 743 KLPEVLVVHLKRFSFISKSNNQLYGHIEKIRKKISYKSELKIPEE-VISPSTRKFNSINL 801
Query: 311 KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLH-------DQA 362
Y+L V HHG GHYT D D+W+ FDD +T + VL A
Sbjct: 802 NYKLTGIVYHHGISSEGGHYTVDVLNQSKDEWIRFDDTIITELSLDDVLSGGDDDGVKTA 861
Query: 363 YVLFYKQV 370
Y+L Y++V
Sbjct: 862 YILMYERV 869
>gi|367008410|ref|XP_003678705.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
gi|359746362|emb|CCE89494.1| hypothetical protein TDEL_0A01620 [Torulaspora delbrueckii]
Length = 795
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 201/451 (44%), Gaps = 98/451 (21%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLT---AFV 65
S++++ PRG+IN N+CF+++ +Q L+ C PF+ +L + TR++ +AG P T A V
Sbjct: 351 SIREVAPRGIINRANICFMSSVMQVLLYCKPFINILNVVGTRNLNARAGTPECTLLDACV 410
Query: 66 GFVSDFDTPSGGSSKKKNI---------SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR 116
F FD S +K + SV I P F + L P + G
Sbjct: 411 NFYKQFDKERLESERKPQLKSKQQQTVNSVASIADAIKPDDFYSALSKI-PKFKDLKWGH 469
Query: 117 PRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTALV------------ 155
QEDA+EFL+ ++DQ+H+E + ++ SIN ++
Sbjct: 470 --QEDAEEFLTHLLDQLHEEFISFIDCLTDNEISNLLQSINDEELKIILHQKSTKIQECR 527
Query: 156 -----------------SLAEEDE-----WETV------GPKNKSAVTRTQSFLPSALSD 187
S+ ++D W V G KNK+A RT PS +S
Sbjct: 528 IYKNPSASLKELIIKYGSINDDDNEDGNGWHEVSGTSKKGKKNKTAAKRTVEVEPSPMSC 587
Query: 188 IFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 245
+FGGQ +SV+ NK S T+ PF + LDI +V+ +E A + FS E L S
Sbjct: 588 LFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISERSVNDLETAFKKFSEYELLP--FKS 645
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------KLHKSVR 290
S+GN V AKK I L ++L++ L RF + + K+ K +
Sbjct: 646 SSGND--VEAKKQTFIDKLPQVLLIQLKRFQFINNTDKDNSMINYNAYNGRIEKIRKKIN 703
Query: 291 FPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 346
+ +L++ + + + +A E R+Y L + HHG GHYTAD + D+W DD
Sbjct: 704 YEHELMIPIESISSTNALRDEDRQYSLSGVIYHHGLSSDGGHYTADVYHKETDKWYRIDD 763
Query: 347 ASVTAIGTSKVLHD--------QAYVLFYKQ 369
++T + VL AY+L Y++
Sbjct: 764 INITEVQKDSVLKGGEDGVDSRTAYILMYQK 794
>gi|358388036|gb|EHK25630.1| hypothetical protein TRIVIDRAFT_113185, partial [Trichoderma virens
Gv29-8]
Length = 877
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 119/364 (32%), Positives = 183/364 (50%), Gaps = 48/364 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L PRGLIN+GN+C++N+ + + S F K+ P + A + F+ +++
Sbjct: 445 LEPRGLINTGNMCYMNSVIGKKAAHS-F-------------KSETPLIDALIMFMREYNV 490
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD-VPNSISG--------RPRQEDAQE 124
K + SV + R E + FTP+ V ++I R Q+DA+E
Sbjct: 491 ------LKSSASVDQLNRALKSEDLERYGEPFTPEFVYDAIRQLSRFASMRRGHQQDAEE 544
Query: 125 FLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
FL F++ + DE L + E + A+T S+A D+W VG K ++AV+R
Sbjct: 545 FLGFLLQSLDDECTHVMKDLPVGHEEVPSSDASTG-GSVAASDDWLEVGRKQRAAVSRLS 603
Query: 179 SFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
S ++ IFGG L+S + G K S T + + L LDI S V + DALR + PE
Sbjct: 604 GHNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIGSPDVRNVVDALRGLTRPE 663
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 295
L+G S G VTA K V I+TL +LILHL RF + ++ G+ K+ K + +PL+L
Sbjct: 664 RLQGDFNSPRGKD--VTATKQVFIETLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLEL 721
Query: 296 VLGRDLLVTP------SAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
+ R+ L A +Y+L++ V HHG++ S GHYT D R + +W+ DD
Sbjct: 722 EIPREALSRQKRQNLDDASMPRYKLISVVYHHGKNASGGHYTVDVRRQDGREWIRLDDTV 781
Query: 349 VTAI 352
+ I
Sbjct: 782 IRRI 785
>gi|343961587|dbj|BAK62383.1| ubiquitin carboxyl-terminal hydrolase 10 [Pan troglodytes]
Length = 252
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 89/237 (37%), Positives = 133/237 (56%), Gaps = 16/237 (6%)
Query: 146 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKAS 205
S+N EDEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K S
Sbjct: 17 SVNEEEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKES 76
Query: 206 ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLS 265
AT+QPF L LDI S+ + T++DAL A E+++GY T + V + V ++ L
Sbjct: 77 ATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLP 133
Query: 266 KILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATV 318
+L+LHL RF Y + G KL K++ +P+ L + ++LL +P + R Y L A V
Sbjct: 134 PVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVV 192
Query: 319 THHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
HHG + GHYT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 193 YHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 249
>gi|393220282|gb|EJD05768.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 1072
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 191/393 (48%), Gaps = 49/393 (12%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG----------YPT 60
V + PRGL+N+GN+CF NA LQ L+ PF +L EL + I G P
Sbjct: 516 VPQIRPRGLVNTGNMCFANAVLQTLVYTPPFFRLFTEL-GKFIDGTGPNATKWAGKDTPL 574
Query: 61 LTAFVGFVSDFDTPSGGSSK--KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR 118
+ A V F+ +F SS+ +++ D F PS +K + N G+
Sbjct: 575 VDATVEFLKEFKPKVKDSSRDSQEDDEDYDAIDSFIPSYVYDAMKEKS-RFDNMGGGQ-- 631
Query: 119 QEDAQEFLSFIMDQMHDELLKLQG---ESTSINGANTALVSLAEEDEWETVGPKNKSAVT 175
QEDA+EF F +D + +ELL + + + I + S +E D+W VG KNK V
Sbjct: 632 QEDAEEFFGFFLDTLEEELLAISKSLTDGSQIKSSGQERNS-SEGDDWLEVGKKNKPVVA 690
Query: 176 RTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
R+ + S ++ IFG + +S +K G + S V+ + L LDI E V +IEDALR S
Sbjct: 691 RSTKSVDSPMTRIFGFKFRSTLKVPGQRDSVMVEDWKSLKLDIQREQVESIEDALRYISH 750
Query: 236 PENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPL 293
P+ ++ +S T +V A + V + TL IL+ HL RF Y + K+HK V +
Sbjct: 751 PQPVQ--MSSVTKGGALVEASQQVLVDTLPPILVCHLKRFLYDTTAKDVIKVHKQVTYGP 808
Query: 294 QLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTADARYFN----------DQ 340
+L + D ++P +A KY+L A + GHYT D + N +
Sbjct: 809 ELEVPSD-AISPARRTAHPVKYKLFAA--------AGGHYTLDVLHPNRNADTNAKPREG 859
Query: 341 WLHFDDASVTAIGTSKVL---HDQAYVLFYKQV 370
W+ DD V+ + T V D AY+LFY+++
Sbjct: 860 WIRIDDELVSDLRTEDVFGTDRDCAYLLFYRRI 892
>gi|449018518|dbj|BAM81920.1| similar to ubiquitin carboxyl-terminal hydrolase 10
[Cyanidioschyzon merolae strain 10D]
Length = 633
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 138/413 (33%), Positives = 186/413 (45%), Gaps = 74/413 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-----RTRDIPKAGYPTLTAFVGFVSDFD 72
G +N+GN C+LNA LQAL++ F L RD+ + L A G++ D
Sbjct: 231 GFVNTGNSCYLNAVLQALLAIDEFRLTWTALGALLPTQRDLLEKCNCHLVA--GWLRLID 288
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP------DVPNSISGRPRQEDAQEFL 126
+ + L GR F A P + S G QEDAQE L
Sbjct: 289 EWQALCQQTR----LQRGR------FGAAAPMLRPTYFWENERLASTVGSGHQEDAQELL 338
Query: 127 SFIMDQMHDELLKLQ---GESTSINGANTALV-SLAEED-----EWETVGPKNKSAVTRT 177
++D +H ELL+L+ GE + + A SL + D EWETV + +SA+ RT
Sbjct: 339 MIMLDGLHSELLELRSLLGEKSKLASLERAASPSLTDSDATSDTEWETVDRRGRSAIVRT 398
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
+ ++ IFGG L+S V+ G K SA +PFL+L LDI + + T++DA R F PE
Sbjct: 399 HQVRKTFITSIFGGALRSEVRKAGAKRSAVREPFLMLSLDIEDQRIRTLDDAFRYFMEPE 458
Query: 238 NLEG-------YRTSSTGNAGVVTAKKSVKIQT-LSKILILHLMRFSYGSQGS---TKLH 286
LE RT + A + +K V + T L + LI+HL RFS S G+ KLH
Sbjct: 459 FLEAPDERDSSARTRTRVAANLDPLRKHVTLDTPLPQALIIHLKRFSVASDGTGQGKKLH 518
Query: 287 KSVRFPLQLVLGRDLL--VTPSAE-----GRKYELVATVTHHGRDPSKGHYTAD--ARYF 337
K + FP Q VL P A+ R+Y LVA +TH G D + GHY AD A
Sbjct: 519 KELSFPPQFVLNASWFSAAVPKAQLGEACSRRYRLVAVITHLGTDLANGHYIADVLASGT 578
Query: 338 NDQ----------------------WLHFDDASVTAIGTSKVLHDQAYVLFYK 368
N W DD V + S VL AYVL Y+
Sbjct: 579 NSTWSLSKSRNAPRGLTRSVDADAIWWQCDDQDVQMVSASTVLSRAAYVLVYR 631
>gi|392595347|gb|EIW84670.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 917
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 125/409 (30%), Positives = 186/409 (45%), Gaps = 65/409 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL-RTRDIP--------------KAGYPTLT 62
GL+N+GN+CF N LQ L+ C PF +L EL R D+ + P +
Sbjct: 511 GLVNTGNMCFANVVLQVLVYCPPFWRLFTELGRLVDVDGEKDKHGEKGKQKRETKTPMID 570
Query: 63 AFVGFVSDF--DTPSGGSSK-------KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI 113
A + F+ +F P G K ++ + F P++ LK N
Sbjct: 571 ASIRFLREFMPKKPVEGKGKGVDREYYRQEEDEQEFYSSFVPTVVYDALKEKK-QFDNMR 629
Query: 114 SGRPRQEDAQEFLSFIMDQMHDEL------LKLQGESTSINGANTALVSLAEEDEWETVG 167
G QEDA+EFL F +D + +E L + NG + +++D W VG
Sbjct: 630 GGH--QEDAEEFLGFYLDTLEEEFNIMSSSLAPPAPRPAQNGHVPSGNEASQDDGWLEVG 687
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIE 227
K + VTRT S ++ IFGG+ +S ++ K SA V+ + L LDI E + TI+
Sbjct: 688 KKQRPTVTRTVKSTESPITRIFGGKFRSTLRVPHQKDSAVVEDWRSLRLDIQREQIATIK 747
Query: 228 DALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKL 285
DAL S P +++ TS T + A + V ++ L +LILHL RF Y + G K+
Sbjct: 748 DALACISHPSSVQ--VTSVTKPGVTLDATQQVHVEALPPVLILHLKRFLYDANAGGVAKV 805
Query: 286 HKSVRFPLQLVLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFN-- 338
K V F +L +G +L+ A G+K Y+L + HHG S GHYT D + N
Sbjct: 806 CKHVSFGPELEIGSELM----APGKKVLTTRYKLFGALYHHGLSASGGHYTLDVLHPNVD 861
Query: 339 ----------DQWLHFDDASVTAIGTSKVL-------HDQAYVLFYKQV 370
+ W+ DD V+ + V H AY+LFY++V
Sbjct: 862 MASGGNTKPREGWIRIDDELVSDVRAEDVFGEQQAPDHRHAYLLFYRRV 910
>gi|452822851|gb|EME29867.1| ubiquitin carboxyl-terminal hydrolase 1 [Galdieria sulphuraria]
Length = 594
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/288 (36%), Positives = 149/288 (51%), Gaps = 41/288 (14%)
Query: 119 QEDAQEFLSFIMDQMHDEL----------------LKLQGESTSING------ANTALVS 156
QED+QEFL I++++H+E+ L+ G+S +N +
Sbjct: 303 QEDSQEFLIHILNELHEEIRTLRKYLEEHLLSSSELQTDGDSEYPKSGIEHHLSNLSFCR 362
Query: 157 LAEEDE--WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLL 214
+ D+ WE VG K KSA+ R F S +S IFGG L+S + G+K+S + +PFL L
Sbjct: 363 DNDSDDGFWEEVGRKGKSAIIRPFQFQSSWISFIFGGILRSELHRIGSKSSVSREPFLFL 422
Query: 215 HLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 274
LDI S VH + DALRL+ PE+L+ + +T V A+K V I+ L ++ IL L R
Sbjct: 423 ELDIQSPHVHNLYDALRLYIEPESLDDVFSETTKQK--VQARKQVTIERLPRVFILQLKR 480
Query: 275 FSY--GSQGSTKLHKSVRFPLQLVLGRDLLVTPSA----EGRKYELVATVTHHGRDPSKG 328
F+ G + KL K + FP+ L L LL + + R Y L A VTH GR+ G
Sbjct: 481 FTLRNGDEVYRKLGKHIDFPVDLCLPSMLLTFSHSYTKPQNRSYSLAAVVTHLGRELVGG 540
Query: 329 HYTADARYF---------NDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
HY D R+ WL+ DD+S++ I VL+ QAY+LFY
Sbjct: 541 HYICDIRWRVPLKSGQREETVWLNCDDSSISCISEKTVLNRQAYLLFY 588
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPF 41
+PRG+IN GN CF++A LQAL++ F
Sbjct: 130 VPRGIINRGNTCFISAVLQALLAVDSF 156
>gi|358390185|gb|EHK39591.1| hypothetical protein TRIATDRAFT_82240 [Trichoderma atroviride IMI
206040]
Length = 862
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/359 (31%), Positives = 186/359 (51%), Gaps = 46/359 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
L PRGLIN+GN+C++N+ +A S K+ P + A + F+ ++
Sbjct: 439 LEPRGLINTGNMCYMNS--RAAHSF----------------KSETPMIDALIMFMREYRV 480
Query: 74 PSGGSSK---KKNISVLDI---GRPFSPS-MFEAV--LKNFTPDVPNSISGRPRQEDAQE 124
+S +N+ D+ G PF+P +++A+ L F +S+ R Q+DA+E
Sbjct: 481 LKSSASADQLNRNLKSEDLERYGEPFTPEFVYDAIRQLSRF-----DSMR-RGHQQDAEE 534
Query: 125 FLSFIMDQMHDELLKLQGE----STSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQS 179
FL F++ + DE + + + +NT+ S+A D+W VG K ++AV+R
Sbjct: 535 FLGFLLQSLDDECTHVMKDLSIVPEEVPSSNTSTGGSVAASDDWLEVGRKQRAAVSRLSG 594
Query: 180 FLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
S ++ IFGG L+S + G K S T + + L LDI S V + DALR + PE
Sbjct: 595 HNTSTPITKIFGGLLRSEFRVPGLKDSITTERYQPLQLDIQSPDVRNVVDALRGLTRPER 654
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLV 296
++G S G V A K V I++L +LILHL RF + ++ G+ K+ K + +PL+L
Sbjct: 655 IQGDFNSPRGKD--VVATKQVFIESLPPVLILHLKRFQFDAEGHGTVKIWKKIGYPLELE 712
Query: 297 LGRDLLVTPSAEGR--KYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAI 352
+ R+ L + +Y+L++ V HHG++ S GHYT D R + +W+ DD + I
Sbjct: 713 IPREALSRQKRDSSMPRYKLISVVYHHGKNASGGHYTVDVRRQDGREWIRLDDTVIRRI 771
>gi|254567223|ref|XP_002490722.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
pastoris GS115]
gi|238030518|emb|CAY68442.1| Ubiquitin-specific protease that interacts with Bre5p [Komagataella
pastoris GS115]
gi|328351106|emb|CCA37506.1| ubiquitin carboxyl-terminal hydrolase 10 [Komagataella pastoris CBS
7435]
Length = 591
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/440 (28%), Positives = 187/440 (42%), Gaps = 96/440 (21%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVGFVS 69
LLP GLIN GN+C++N+ LQ + C P ++L+ +R + I + P L A +
Sbjct: 163 LLPHGLINRGNICYMNSVLQLFIFCKPLFRVLRCIREKTIAHVSGTSDTPILDALTLLLE 222
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
F S SV D G P S F + + P + G+ QEDA+EF+ ++
Sbjct: 223 RFQHKESHES----ASVDDFGEPLSQESFYTSIISL-PKFSHLRWGQ--QEDAEEFMGYV 275
Query: 130 MDQMHDELLKLQGEST---------SINGANTA-LVSLA--------------------- 158
+D++H+E + + T S+N + +S A
Sbjct: 276 LDELHEEFISQMTKLTDTEKSQLLASVNNVESKKQISEALNLIQKKPGSSPKSKYDTEDK 335
Query: 159 -EEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV--VKAQGNKASATVQPFLLLH 215
++D W VG NK + RT PS +++IFGGQ +SV V Q N S T+ PFL +
Sbjct: 336 HDDDGWCEVGSNNKLSAKRTVEVKPSPITEIFGGQFRSVLNVPRQKNGRSITLDPFLHVQ 395
Query: 216 LDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 275
LDI V ++EDA S E + Y++S N +V A K I L ++LI+HL RF
Sbjct: 396 LDISEPNVSSVEDAFTYLSQIEVIP-YKSS---NGNLVQATKQNMIDKLPEVLIIHLKRF 451
Query: 276 SYGSQGST----------------------------------------KLHKSVRFPLQL 295
SY Q S+ K+ K ++F L
Sbjct: 452 SYVRQESSSDVGTPVPQSSSPSPSPSPSGSTQNGFHSKNNDAEMGCIQKIQKIIKFGHAL 511
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT----- 350
+ L + +Y+L + HHG GHYT D + D WL DD ++
Sbjct: 512 TIPEACL-SRGETNNEYQLQGVIYHHGNSTEGGHYTIDVKNDRDSWLRIDDTNIVPLTPQ 570
Query: 351 -AIGTSKVLHDQAYVLFYKQ 369
+G S AY+L Y++
Sbjct: 571 QVVGASTNDGKDAYILVYQK 590
>gi|390597718|gb|EIN07117.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 980
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 139/431 (32%), Positives = 193/431 (44%), Gaps = 90/431 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSP----FVQLLQELRTR---DIPKAG------------- 57
GLIN+GN+CF NA LQ L+ C P F +L + L T D P G
Sbjct: 556 GLINTGNMCFANAVLQVLVYCPPFWRLFRELGKYLPTTVAFDGPVVGKEREKEKDEKKSP 615
Query: 58 YPTLTAFVGFVSDFDTPSG---GSSKKKNIS------------------------VLDIG 90
P + A V F+S+F P+ G K K+ +D
Sbjct: 616 VPLVEATVQFLSEF-VPAEDKEGHGKDKDRGREGGKGKKSGKGREVSMDGEDEDWAMDS- 673
Query: 91 RPFSPSMFEAVL---KNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK-LQGESTS 146
F PS V+ K F ++G QEDA+EF F +D + +ELL L +
Sbjct: 674 --FIPSTVYDVVRATKRF-----GGMTGG-HQEDAEEFFGFYLDTLEEELLSILHSIAPE 725
Query: 147 INGANTALV---------SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+N A + V S ED W VG KN+S VTRT S ++ +FGG+ +S +
Sbjct: 726 LNAAASPAVPDEPRDVAGSSQHEDGWLEVGKKNRSVVTRTTKSTESPITRLFGGKFRSTL 785
Query: 198 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKK 257
+A K S V+ + L LDI E VHTI DAL S P+ ++ + G VV A +
Sbjct: 786 RAPHQKDSVIVEDWRELQLDISREQVHTIADALAHLSHPQPVQIALPTRPGY--VVDATQ 843
Query: 258 SVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGR--KYE 313
V I L IL+LHL RF Y ++ K+ K V +LV+ D++ G +Y+
Sbjct: 844 HVLIDALPPILVLHLKRFLYDTKVGDVVKIGKKVALEPELVIPADIIAPTRRAGPPARYK 903
Query: 314 LVATVTHHGRDPSKGHYTADARYFN--------DQWLHFDDASVTAIGTSKVLHDQ---- 361
L + V HHG S GHYT D + N + W+ DD V+ I V Q
Sbjct: 904 LFSVVYHHGLSASGGHYTLDVLHPNRDLSTKPREAWIRIDDELVSDIRPEDVFGGQERDD 963
Query: 362 --AYVLFYKQV 370
AY+LFY++V
Sbjct: 964 RCAYLLFYRKV 974
>gi|344299919|gb|EGW30259.1| hypothetical protein SPAPADRAFT_57083 [Spathaspora passalidarum
NRRL Y-27907]
Length = 511
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 130/415 (31%), Positives = 186/415 (44%), Gaps = 92/415 (22%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG---YPTLTAFVGFVSDFD 72
PRGL N+GN+C++N+ LQ L+ C PF +LL+ + + I G P L A + + F
Sbjct: 129 PRGLANTGNICYMNSILQILLYCEPFNRLLKLIHDKSIGNLGASPTPMLDATIKLFNQFK 188
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDAQE 124
+ P SP F NS++ +P+ QEDA+E
Sbjct: 189 PDEESKT------------PISPDEFY-----------NSLTAQPKFSHLKWGQQEDAEE 225
Query: 125 FLSFIMDQMHDELL------------------KLQGESTSIN----GANTALVSLAEEDE 162
FL + +D +++E L L+ ++N T + + E +
Sbjct: 226 FLGYYLDGLNEEFLGVLKKLNTPMIDSLIQHYSLENGVETVNKFKYNVKTTMKKVRNESK 285
Query: 163 WE--------------TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV----KAQGNKA 204
E VGPK K V RT P+ L+ IFGGQ KSV+ +
Sbjct: 286 EENDESEDDDDEGEWNEVGPKKKIHVKRTVEVEPTPLNMIFGGQFKSVLTIPKSTNSFQK 345
Query: 205 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 264
S T PF + LDI SEA TIE AL + E + Y++S+ + KK + L
Sbjct: 346 SITFDPFQHVQLDI-SEA-STIEGALEHLNKVEAI-SYKSSNKE----IQIKKQTFLDKL 398
Query: 265 SKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHG 322
+LI+HL RFSY +Q KL K + + L++ +D+L T SAE KY L + V HHG
Sbjct: 399 PPVLIIHLKRFSYSNQDVAIEKLKKKIDYNHDLIIPKDVLST-SAE-IKYRLTSVVYHHG 456
Query: 323 RDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLH------DQAYVLFYKQV 370
GHYT D +D QW DDA+ I T V + AY+L YK+V
Sbjct: 457 SSADAGHYTTDVFKSDDSQWWRIDDANFKEISTDDVQNHGGDDIKNAYILLYKKV 511
>gi|50552594|ref|XP_503707.1| YALI0E08844p [Yarrowia lipolytica]
gi|49649576|emb|CAG79296.1| YALI0E08844p [Yarrowia lipolytica CLIB122]
Length = 749
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 185/389 (47%), Gaps = 55/389 (14%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA---GYPTLTAFVGFVSDF- 71
PRG++N+GN+CF+N+ LQ L+ C PF +L+ +R + +P++ P A V F+ D+
Sbjct: 382 PRGIVNNGNVCFMNSILQILVHCLPFSRLIDLIREK-VPRSLDGDSPLTEAVVDFLDDYK 440
Query: 72 ----DTPSGGS----SKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN-SISGRPRQEDA 122
+ +GGS SK +I++ S +++++ VP S R +QEDA
Sbjct: 441 RGAVNGVNGGSTPATSKLPDITI--------DSFYKSIVS-----VPRFSHFQRGKQEDA 487
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
+EFL +++D +H+E + + G AE W VG K K++ TR+ F
Sbjct: 488 EEFLGYLLDGLHEEFVAVIGAREEAAAKEEGATGSAE---WTQVGAK-KNSTTRSPQFPW 543
Query: 183 SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
S +SDIFGG+ +S + S ++PF ++HLD+ + + ++E + SA E +E
Sbjct: 544 SPVSDIFGGKFESNLDVPRQSVSKVLEPFHVIHLDVENPNITSVESGFKALSAKEQVE-- 601
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-----STKLHKSVRFPLQLVL 297
T G + A K ++ L +IL++ L RF+Y K++K + + L +
Sbjct: 602 -TFGEGGRPITGASKQTLLEELPRILVVQLKRFTYCGDDLMDLQVRKINKKISYGADLSV 660
Query: 298 --------GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
+ + +Y LV V HHG + GHYT + +W DD +
Sbjct: 661 PMESLSLKAKQQFRASGGKSNQYNLVGVVFHHGTSTTTGHYTVNVLVGGTKWYRIDDVKI 720
Query: 350 TAIGTSKVLHDQ--------AYVLFYKQV 370
AI + AY+L Y++V
Sbjct: 721 EAIRNENWYAKEEDGKDDKTAYLLIYQRV 749
>gi|448114672|ref|XP_004202635.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
gi|359383503|emb|CCE79419.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
Length = 868
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 196/458 (42%), Gaps = 110/458 (24%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 64
N PV +K RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ + G + T
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLIETKTVGNLGNKSSTPL 483
Query: 65 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQED 121
+ V F S + N S + F+ F L + N +QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNAS----NKAFAVENFYLSL------IANEKFQHLKWGQQED 533
Query: 122 AQEFLSFIMDQMHDELLKLQGESTS--ING------------------------------ 149
A+EFL +++D +H+E + T+ ++G
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQVDGLIQNFQKMHDGNDDYTVHEFKANVKNTMKI 593
Query: 150 -------ANTALVSLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 201
AN + ++ D W VG N K + RT PS +++IFGGQ +SV++
Sbjct: 594 LKKYAEPANEREDAESDNDGWAEVGSNNRKVSAKRTVEIEPSPITNIFGGQFRSVLQIPK 653
Query: 202 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 259
+K S T+ P+ + LDI A+ TIE+A + + PE + Y++++ V AKK
Sbjct: 654 SKESESITLDPYQCIQLDISDPAIGTIEEAFKHMNEPEKIP-YKSANK----EVIAKKQT 708
Query: 260 KIQTLSKILILHLMRFSY---------------------GSQGSTKLHKSVRFPLQLVLG 298
I L L++HL RFSY G G KL K + + L +
Sbjct: 709 FIDQLPNALVIHLKRFSYQQGTRDGSDAGDDSAQPRSNGGIGGIEKLRKKITYSHTLTIP 768
Query: 299 RDLLV----TPSAEGRKYELVATVTHHGRDPSKGHYTADA---------------RYFND 339
++L SA G Y+L V HHG GHYT D + ++
Sbjct: 769 NEVLSPITQKQSANGYHYKLFGVVYHHGIGAEGGHYTCDVLRKSSLHDSQEESNDKKIDN 828
Query: 340 QWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 370
+W+ DD V +I ++VL AY+LFY+++
Sbjct: 829 EWIRIDDTQVESIDKNEVLDSGSEESSKNAYILFYQKI 866
>gi|50290211|ref|XP_447537.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526847|emb|CAG60474.1| unnamed protein product [Candida glabrata]
Length = 816
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 135/462 (29%), Positives = 210/462 (45%), Gaps = 101/462 (21%)
Query: 3 AINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPT- 60
A NE +++++PRG+IN+ N+CF+++ LQ L+ C+PFV +L + TR++ K+G +
Sbjct: 360 AKNEDKLPIREIIPRGIINNANICFMSSVLQVLLYCAPFVDILNVVSTRNMNAKSGSSSA 419
Query: 61 --LTAFVGFVSDFDTPSGGSSKKKNISVLDIG-RPFSPSMFEAVLKNFTPD-VPNSISGR 116
L A + FD + K+K G + SP + ++ + PD S+S
Sbjct: 420 KLLDACLTIYKKFDKANYEKEKEKESEKEKPGSKKSSPPAYASITEAVNPDEFYRSLSTI 479
Query: 117 PR--------QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED------- 161
P+ QEDA+EFL+ ++DQ+H+EL+ +S S N L S+ +ED
Sbjct: 480 PKFKDLRWGHQEDAEEFLTHLLDQLHEELISAI-DSLSENEILNLLQSIHDEDLKIYIIR 538
Query: 162 --------EW-ETVGPKNKSAVT---------------------------------RTQS 179
E+ + + P+ K + RT
Sbjct: 539 NLSRYKDAEFIKNMSPQLKDQINKYGTISDDSEEGNGWHEVSGSSKKGKKTKTAAKRTVE 598
Query: 180 FLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
F+PS +S++FGGQ +SV+ NK S T+ PF + LDI V ++E AL+ FS E
Sbjct: 599 FIPSPISNLFGGQFRSVLDIPQNKESQSITLDPFQTIQLDISDPGVDSLEAALKKFSEYE 658
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-------------- 283
L SS+GN V AKK I L +IL++ L RFS+ S
Sbjct: 659 LLP--FKSSSGND--VEAKKQTFIDKLPQILLIQLKRFSFISNADKDNGMTNYNAYSGRI 714
Query: 284 -KLHKSVRFPLQLVLGRDLLVTPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFND 339
K+ K + + L + + L + + + YEL + HHG P GHYTAD F+
Sbjct: 715 EKIRKKISYGHTLEIPDETLASSALRNNSSKTYELSGVIYHHGMSPDGGHYTADV--FHK 772
Query: 340 Q---WLHFDDASVTAIGTSKVLHD--------QAYVLFYKQV 370
Q W DD ++T + VL AY+L Y+ V
Sbjct: 773 QTKTWYRIDDVNITKLEDDDVLKGGEDNMDSRTAYILMYQNV 814
>gi|320583155|gb|EFW97371.1| Ubiquitin-specific protease [Ogataea parapolymorpha DL-1]
Length = 493
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 185/436 (42%), Gaps = 106/436 (24%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK--AGYPTLTAFVGFVSDF 71
L P GL+N+GN+C++NA LQAL +C PF Q+L +R + + + P + A V F
Sbjct: 81 LAPHGLVNNGNICYMNAILQALFACRPFSQMLFAVRHLSLGRLESHTPIMDALVALHDAF 140
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ K + VL +P+ F + P + G RQEDA+EFL +++D
Sbjct: 141 N--------KSSPEVL------TPTGFYGSIARL-PRFSHLKWG--RQEDAEEFLGYLLD 183
Query: 132 QMHDEL---LKLQGES------------TSINGANTALVSL----------AEEDEWETV 166
+H+E +K ES ++ N+AL + E++ W V
Sbjct: 184 GLHEEFVDSIKRLAESDIADLRASIKDPQTLKTLNSALEMIKTGQINGSTEKEDNGWMEV 243
Query: 167 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHT 225
G K AV R PS + +FGG +SV++ NK S+ T+ PF+ + L+I + ++
Sbjct: 244 GANQKMAVKRQVDVKPSPVVQMFGGHFRSVLQVPNNKKSSITLDPFMHVQLEISDKDINN 303
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-- 283
+ A F+ E + + G TAKK I L +LI+HL RFS+ + +
Sbjct: 304 LYTAFEKFATVEEI---------SYGDQTAKKQNLIDKLPTVLIIHLKRFSFVANDDSNE 354
Query: 284 ----------------------------------------KLHKSVRFPLQLVLGRDLLV 303
KLHK + +P +L L +
Sbjct: 355 NFNDYEIVSSKQRRNKTSASQTLPPVPTHTKTPETGGRIEKLHKKIEYPHRLTLPASCIS 414
Query: 304 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD--- 360
E Y L A V HHGR +GHYTAD +D W DD VT I + +
Sbjct: 415 PNVMEEPTYRLTAVVYHHGRSTEEGHYTADVLGADDSWTRVDDTLVTRISAEDAVENGHG 474
Query: 361 -------QAYVLFYKQ 369
AY+L Y++
Sbjct: 475 GGATNGKSAYILMYEK 490
>gi|302422160|ref|XP_003008910.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
gi|261352056|gb|EEY14484.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
Length = 879
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 174/363 (47%), Gaps = 62/363 (17%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
+ VK + PRGL+N GN+C++N+ PF QE T +P F
Sbjct: 478 EKVKYVEPRGLVNIGNMCYMNSRK------GPF--EFQEPNT-------HPGRNYGTSFT 522
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+F +++A+ PD R Q+DA+EF
Sbjct: 523 PEF-------------------------IYQAI----EPDKRFENMRRGHQQDAEEFFGL 553
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSL---AEEDEWETVGPKNKSAVTRTQSFLPSA- 184
++ + DE K+ G + S N + A S A D W VG K ++AVTR+ S
Sbjct: 554 LLQSLDDECAKVMGVA-SGNAPHPAPASANADATADGWLEVGAKQRAAVTRSSGASSSTP 612
Query: 185 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE--GY 242
++ IFGG L+S ++ G + S T +P+ L LDI + V + DAL+ +A E LE G+
Sbjct: 613 ITQIFGGLLRSELRVTGKQDSITTEPYQALQLDIGANDVRNVVDALKRLTAHEKLEGSGF 672
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ-GSTKLHKSVRFPLQL-----V 296
+ NA VV K I TL +LILHL RF + ++ G+TK+ K V +PL+L
Sbjct: 673 NSPHGKNATVV---KQTLIDTLPPVLILHLKRFHFDAEGGTTKIWKKVGYPLELEIPVQA 729
Query: 297 LGRDLLVT-PSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGT 354
L R + EG KY+L+A V HHG+ + GHYTAD R ++ +W+ DD + + +
Sbjct: 730 LARQWRASNKGGEGPKYKLIAVVYHHGKHANGGHYTADVRRQDEHEWIRLDDTVIRRVRS 789
Query: 355 SKV 357
V
Sbjct: 790 EDV 792
>gi|448112101|ref|XP_004202009.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
gi|359464998|emb|CCE88703.1| Piso0_001480 [Millerozyma farinosa CBS 7064]
Length = 868
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 196/458 (42%), Gaps = 110/458 (24%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 64
N PV +K RGL N+GN+C++NA LQ L+ C PF ++L+ + T+ + G + T
Sbjct: 427 NTPVYKIKK---RGLTNTGNICYMNAILQILLYCEPFNKMLKLVETKTVGNLGNKSSTPL 483
Query: 65 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQED 121
+ V F S + N ++ +PF+ F L + N +QED
Sbjct: 484 LDLVIKFFNEFSSSQRNSNGTI----KPFAVENFYLSL------IANEKFQHLKWGQQED 533
Query: 122 AQEFLSFIMDQMHDELLKLQGESTS--------------------------INGANTALV 155
A+EFL +++D +H+E + T+ N NT +
Sbjct: 534 AEEFLGYLLDGLHEEFVNATKSLTTPQIDGLIQDFQKMHDGSDDYTVREFKANVKNTMKI 593
Query: 156 -------------SLAEEDEWETVGPKN-KSAVTRTQSFLPSALSDIFGGQLKSVVKAQG 201
+ ++ D W VG + K + RT PS ++ IFGGQ +SV++
Sbjct: 594 LKKYTEPASEREDTESDNDGWAEVGSNHRKVSAKRTVEIEPSPITSIFGGQFRSVLQIPK 653
Query: 202 NKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSV 259
+K S T+ P+ + LDI ++ TIE+A + + PE + Y+ ++ V AKK
Sbjct: 654 SKESESITLDPYQCIQLDISDPSIGTIEEAFKHMNEPEKIP-YKAANK----EVIAKKQT 708
Query: 260 KIQTLSKILILHLMRFSY---------------------GSQGSTKLHKSVRFPLQLVLG 298
I L +L++HL RFSY G G KL K + + L +
Sbjct: 709 FIDQLPNVLVIHLKRFSYQQGARDGSDAGDDSTQPRSNGGLGGIEKLRKKITYSHTLTIP 768
Query: 299 RDLLV----TPSAEGRKYELVATVTHHGRDPSKGHYTADA---------------RYFND 339
++L SA G Y+L V HHG GHYT D + ++
Sbjct: 769 NEVLSPITQKQSANGYHYKLFGVVYHHGIGAEGGHYTCDVLRKSSLHDSQEESNDKKIDN 828
Query: 340 QWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 370
+W+ DD V +I ++VL AY+LFY+++
Sbjct: 829 EWIRIDDTQVESIDKNEVLDSGSEESSKNAYILFYQKI 866
>gi|302309414|ref|NP_986805.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|299788348|gb|AAS54629.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|374110054|gb|AEY98959.1| FAGR139Cp [Ashbya gossypii FDAG1]
Length = 813
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 130/465 (27%), Positives = 199/465 (42%), Gaps = 114/465 (24%)
Query: 6 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 62
E K++K +PRG++N GN+CF+++ LQ L+ C PF+++L + R K+ P L
Sbjct: 362 ESAKAIKLGIPRGIMNKGNICFMSSVLQVLLFCEPFIEMLNVVHARTGVKSWTLLPPLLG 421
Query: 63 AFVGFVSDF----------DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 112
+ + F +F D S G+ K + P F + P +
Sbjct: 422 SCLEFYKEFEKLHADKDKNDKQSNGNGKSAKANRSSQPDAIDPEHFYKCISKL-PMFKDL 480
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA-----LVSLAEED------ 161
G QEDA+EFL+ +DQ+H+E + +SIN + + L SL+++D
Sbjct: 481 QWGH--QEDAEEFLTHFLDQLHEEFV------SSINSLSCSDMIHLLQSLSDDDLKAEFV 532
Query: 162 ------------------------------------------EWETV---GPKNKSAVTR 176
EW V G K ++ V R
Sbjct: 533 RSLSKYKRAEFIKNMSSELKALIDKYGSALEYDTSEGSENSSEWHEVSKKGKKTRNTVKR 592
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKAS--ATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T PS + IFGG+ +SV+ NK S T+ PF LHL I V+ +E A + FS
Sbjct: 593 TTELEPSPIMSIFGGEYRSVLDIPQNKESHSITLDPFYTLHLHISDPEVNDLESAFKKFS 652
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST----------- 283
E L Y+ S GN V AKK + L ++L++ L RF + + S
Sbjct: 653 DFEYL-SYKADS-GND--VEAKKQAFLDRLPRVLLIQLKRFEFVNNSSERRELINYNAYN 708
Query: 284 ----KLHKSVRFPLQLVLGRDLLVTPSAE----GRK--YELVATVTHHGRDPSKGHYTAD 333
K+ K +R+ +L + ++ L + +A+ G+ Y L V HHG PS GHYTAD
Sbjct: 709 GRIEKIRKWIRYDQELTIPKEALSSVNAKFYLSGKDTTYRLTGVVYHHGLSPSGGHYTAD 768
Query: 334 ARY-FNDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 369
+ D+W DD +VT I V AY+L Y++
Sbjct: 769 VLHQTQDKWYRIDDNNVTEIRQEDVFKRGDEASDSKTAYILIYQR 813
>gi|226290446|gb|EEH45930.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 897
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 141/264 (53%), Gaps = 30/264 (11%)
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQGESTSI-----NGANTALVSLAEE---DEWETVG 167
R Q+DAQEFL F+++++H+E + ++TS +T S A E + W VG
Sbjct: 541 RGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTPVDTDSASAASEPSVEGWLEVG 600
Query: 168 PKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
K K ++TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S V
Sbjct: 601 HKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVTN 660
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--QGST 283
I DAL+ + PE ++G SS G VTA K V I+TL +LILHL RF Y S +G+
Sbjct: 661 IIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTKGTQ 718
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGR--------------KYELVATVTHHGRDPSKGH 329
K+ K V +PL+L + R++ P KY L + HHG++ S GH
Sbjct: 719 KIWKRVGYPLELEVPREVF-PPHRRNNLLAAQGSGGGSGLPKYRLTGVIYHHGKNASGGH 777
Query: 330 YTADARYFND-QWLHFDDASVTAI 352
YT D R + +W+ DD + +
Sbjct: 778 YTVDVRRQDGREWVRLDDTVIRRV 801
>gi|448534206|ref|XP_003870774.1| Ubp3 protein [Candida orthopsilosis Co 90-125]
gi|380355129|emb|CCG24646.1| Ubp3 protein [Candida orthopsilosis]
Length = 706
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 117/402 (29%), Positives = 192/402 (47%), Gaps = 70/402 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 67
V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+ D+ + P + +
Sbjct: 333 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVISSQPLIDTTIKL 392
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
++F S K +S+ PF ++ + KNF +QEDA+EFL
Sbjct: 393 FNEF----KPSDNKLPVSI----EPFYSAL--SKHKNF------QHLKWGQQEDAEEFLG 436
Query: 128 FIMDQMHDELLKLQGESTSIN---------------------GANTALVSLA------EE 160
+ +D +++E++ G +N T + + EE
Sbjct: 437 YYLDALNEEMI---GALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIKRIKKDEQEDEE 493
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK----AQGNKASATVQPFLLLHL 216
EW VG +K +T+ + P+ L+ IFGG+ KSV+ + + S T+ PF + L
Sbjct: 494 SEWNEVG--SKKNITKIE-VDPTPLNMIFGGEFKSVITIPKVSSTFQKSITLDPFQHVQL 550
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI + ++IE+A + E + Y+ N V KK I+ L ++LI+HL RFS
Sbjct: 551 DISNS--NSIEEAFIHLNELETI-SYKG---NNNKEVEVKKQTFIEKLPQVLIIHLKRFS 604
Query: 277 YGSQGST---KLHKSVRFPLQLVLGRDLLVTPSA-EGRKYELVATVTHHGRDPSKGHYTA 332
Y KL K++ + L + ++L P +Y+L++ V HHG GHYT+
Sbjct: 605 YSKDQENAIEKLAKNISYDHTLTIPNEILSQPQGVTSNQYQLISVVYHHGSSADAGHYTS 664
Query: 333 DARYF-NDQWLHFDDASVTAIGTSKVLH---DQAYVLFYKQV 370
D F N+QW DD V I +VL + AY+L Y ++
Sbjct: 665 DTFDFENNQWWEIDDTIVKPIKDDEVLSSGINNAYILLYSKI 706
>gi|50307989|ref|XP_453994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643129|emb|CAG99081.1| KLLA0E01013p [Kluyveromyces lactis]
Length = 774
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 135/463 (29%), Positives = 199/463 (42%), Gaps = 121/463 (26%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY--PTLTAFVG 66
K + +L+PRG+ N G++CF+++ LQ L+ C FV LL + T + + P L A +
Sbjct: 329 KLITELVPRGIYNKGSICFISSVLQLLIHCRSFVNLLNVIHTTTVSRTNSVSPLLNACMD 388
Query: 67 FVSDFD----------------TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVP 110
FD T S S+ +NI +D PF S+ + P
Sbjct: 389 VFKRFDRETIVNELNETRENSKTKSKSSNLNENIISID-PEPFYKSI------STLPKFK 441
Query: 111 NSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALV-----SLAEED---- 161
+ GR QEDA+EFL+ ++DQ+H+E + SIN N+ + SL E+D
Sbjct: 442 DLTWGR--QEDAEEFLTHMLDQLHEEFI------GSINTLNSNDILNIFQSLQEDDQKVF 493
Query: 162 ----------------------------------------EWETV---GPKNKSAVTRTQ 178
EW+ V G K+K+A R
Sbjct: 494 FLKYISKYKSASFAEKPEQSLKALFEKYKQTNDLSDEEDKEWKEVSKKGKKSKNASKRIT 553
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATV--QPFLLLHLDIYSEAVHTIEDALRLFSAP 236
S +S IFGGQ +SV+ NK S ++ PF + LDI S V +E A + FS
Sbjct: 554 EVESSPISTIFGGQFRSVLDTPQNKESQSITYDPFQTIQLDISSPDVIDLESAFKKFSEQ 613
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 283
E++E SS+GN V AKK I L + L++ RFS+ SQ S
Sbjct: 614 ESIE--LKSSSGND--VEAKKHTCIDKLPQALLIQFKRFSFVSQSSKNDLSNYNSFNGRI 669
Query: 284 -KLHKSVRFPLQLVLGRDLL------VTPSAEGRKYELVATVTHHGRDPSKGHYTADARY 336
K+ K V++ +L + ++ + + S E KY L + HHG PS GHYT D
Sbjct: 670 EKIRKMVKYNHELTIPKESISPNLVSTSNSEESFKYYLSGVIYHHGVSPSGGHYTCDVYD 729
Query: 337 FN-DQWLHFDDASVTAI---------GTSKVLHDQAYVLFYKQ 369
+ D+W DD +V I G S AY+L Y++
Sbjct: 730 KDLDKWYRIDDVNVDEIKNKEDILRSGDSASDSRTAYILLYEK 772
>gi|295659066|ref|XP_002790092.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281994|gb|EEH37560.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 914
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/266 (36%), Positives = 145/266 (54%), Gaps = 28/266 (10%)
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSING-----ANTALVSLAEE---DEWE 164
++ R Q+DAQEFL F+++++H+E + ++TS +T S A E + W
Sbjct: 506 MNSRGHQQDAQEFLGFLLEELHEECTQAVKQATSTGPDIPTHVDTDSASAASEPSVEGWL 565
Query: 165 TVGPKNKSAVTRTQSFLPS--ALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
VG K K ++TR+ + S ++ IFGG+L+S + GNK S T++P+ L LDI S
Sbjct: 566 EVGHKQKPSITRSSGHVASESPITKIFGGKLRSEFRVPGNKNSVTLEPYQSLQLDIGSPQ 625
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS--Q 280
V I DAL+ + PE ++G SS G VTA K V I+TL +LILHL RF Y S +
Sbjct: 626 VTNIIDALKGLTKPETMQGDFNSSRGPK--VTATKQVFIETLPPVLILHLKRFQYDSVTK 683
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTP------SAEGR-------KYELVATVTHHGRDPSK 327
G+ K+ K V +PL+L + R++ SA+G KY L + HHG++ S
Sbjct: 684 GTQKIWKRVGYPLELEVPREVFPPHRRNNLLSAQGSGGGSGLPKYRLTGVIYHHGKNASG 743
Query: 328 GHYTADA-RYFNDQWLHFDDASVTAI 352
GHYT D R +W+ DD + +
Sbjct: 744 GHYTVDVLRQDGREWVRLDDTVIRRV 769
>gi|150865443|ref|XP_001384663.2| hypothetical protein PICST_59800 [Scheffersomyces stipitis CBS
6054]
gi|149386699|gb|ABN66634.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 489
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 190/416 (45%), Gaps = 82/416 (19%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI----PKAGYPTLTAFVGFVS 69
+ PRGL N+GN+C++N+ LQ L+ C PF +LL+ + + I + P L A + F +
Sbjct: 94 IAPRGLTNTGNICYMNSILQMLLYCVPFNRLLKLIEDKSIGTLNRASPTPLLDATIKFFN 153
Query: 70 DF-DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-------RQED 121
DF D SG SS+ ++ S I SP F L IS +QED
Sbjct: 154 DFSDKTSGLSSEVEDASESAI----SPETFYMTL----------ISHEKFSHLKWGQQED 199
Query: 122 AQEFLSFIMDQMHDELL----KLQGEST-------SINGANTALVSLAEEDEWET----- 165
A+EFL + +D +H+E L KL S S N VS+ + + T
Sbjct: 200 AEEFLGYYLDGLHEEFLSEIRKLNTPSVDSLIQTFSNENENVEKVSMFKFNIKNTVKLIK 259
Query: 166 ------------VGPKNKS-AVTRTQSFLPSALSDIFGGQLKSVV---KAQGN---KASA 206
VG NK +V RT PS ++ IFGG KSV+ KA + S
Sbjct: 260 NENKNNDNEWNEVGSNNKKISVKRTVEIEPSPINMIFGGSFKSVLIVPKANNPNQFQKSI 319
Query: 207 TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSK 266
T+ PF L LDI SEA TIEDA + E + S N V KK I L +
Sbjct: 320 TLDPFQNLQLDI-SEA-DTIEDAFLNMNKLE-----KISYKNNDKEVQLKKQTFIDRLPE 372
Query: 267 ILILHLMRFSY---GSQGSTKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTH 320
+LI+HL RFSY G KL K V + L + ++L S ++L+ V H
Sbjct: 373 VLIIHLKRFSYLKDKEVGIEKLRKKVDYAHDLHVPSEVLSNKNIISNAATSFKLIGVVYH 432
Query: 321 HGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQ 369
HG GHYT+D+ ND WL DD ++ I +VL+ AY+L Y++
Sbjct: 433 HGSSAEGGHYTSDSNVAND-WLRIDDTTLKPISVDEVLNGGTEESIKNAYILLYER 487
>gi|159485266|ref|XP_001700667.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272099|gb|EDO97905.1| predicted protein [Chlamydomonas reinhardtii]
Length = 634
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/357 (33%), Positives = 178/357 (49%), Gaps = 70/357 (19%)
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV---------------------PNSIS-- 114
SSK +++L G+P PSM ++ F P + P+
Sbjct: 280 SSKDAVMALLLGGKPLVPSMLNGIVAAFNPRISIASASSTSSAGAGAGGGGGKPSMAQLL 339
Query: 115 --GRPRQEDA-----------QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAE-- 159
G R A QEF+ F++D+ H+E++ L+ ++ ++ A A S ++
Sbjct: 340 SKGGGRSAGAVLVEQQEQQDAQEFVHFLVDRAHEEMVALR-KAHGLDEAQHAQGSASDGG 398
Query: 160 ------EDEWETVG-PKNKSAVTRTQSFLP-------SALSDIFGGQLKSVVKAQ---GN 202
DEW VG KNK+ VTR Q P SA+S IFGG LKS ++ Q G+
Sbjct: 399 AQNGDDADEWAQVGRKKNKATVTR-QVGAPAGDASSRSAVSAIFGGLLKSTIRFQPPHGH 457
Query: 203 -KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKI 261
K S T+Q F +LHLDI + ++EDALR S PE++E Y+ G + ++ KK V++
Sbjct: 458 YKPSTTIQSFNMLHLDIAGNEISSLEDALRHHSVPESIE-YKPD--GASEMLPVKKDVRL 514
Query: 262 QTLSKILILHLMRFSYGSQ------GSTKLHKSVRFPLQLVLGRDLLV--TPSAEGRKYE 313
L + L+LHL RF+Y + G +KLHK V F L L +L P +Y
Sbjct: 515 YRLPECLVLHLKRFTYSATAGGHGGGYSKLHKMVAFGNSLRLDSKVLADDCPDRSQPEYR 574
Query: 314 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L ATV HHGR + GHYTAD + WL F+DA V + + VL ++ Y+LFY++
Sbjct: 575 LFATVIHHGRSIAGGHYTADVLQPDGVTWLRFNDAVVDVVPEAAVLGERPYLLFYQR 631
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTL 61
E +S L PRGL+N+GN CF+NATLQAL++C PF +L L +P A PTL
Sbjct: 119 GEQAESQSLLQPRGLVNTGNTCFINATLQALIACRPFASVLSRLPGV-VPLLEPAKCPTL 177
Query: 62 TAFVGFVSDF 71
F S+
Sbjct: 178 YGLAQFASEM 187
>gi|363753770|ref|XP_003647101.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890737|gb|AET40284.1| hypothetical protein Ecym_5544 [Eremothecium cymbalariae
DBVPG#7215]
Length = 834
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 207/464 (44%), Gaps = 106/464 (22%)
Query: 6 EPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGY---PTLT 62
E K++ ++PRG++N GN+CF+++ LQ L+ C PF+ +L + TR K+ P L
Sbjct: 378 ETTKAINTIVPRGILNKGNICFMSSVLQVLLFCKPFISMLNAVCTRTGTKSSCSLPPLLD 437
Query: 63 AFVGFVSDFD------------TPSGGSSK-KKNISVLDIGRPFSPSMFEAVLKNFTPDV 109
A + F +FD + SG + K K ++ L + P F + + +
Sbjct: 438 ACLDFYKEFDKGNFEKERGEKQSISGNNGKASKGVTRLPLADVIDPESFYKSISKLS--M 495
Query: 110 PNSISGRPRQEDAQEFLSFIMDQMHDELL------------------------------- 138
+ QEDA+EFL+ +DQ+H+E +
Sbjct: 496 FRELQW-GHQEDAEEFLTHFLDQLHEEFVSAINTLSSNEIMNLLQSISDDELKTEFIRSL 554
Query: 139 ----------KLQGESTSI---NGAN--TALVSLAEED--EWETV---GPKNKSAVTRTQ 178
K+ E ++ G+N + S +ED EW V G + K+AV RT
Sbjct: 555 PKYKSSDFVRKMSAELKTLIENYGSNPESESNSNGDEDICEWHEVSKKGKRAKNAVKRTM 614
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
PS + IFGG+ +SV+ NK S T+ PF LHL I V+ +E A + FS
Sbjct: 615 EVEPSPIMSIFGGEYRSVLDIPQNKESQSITLDPFYTLHLHISDPEVNDLESAFKKFSDF 674
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 283
E L Y+ S GN V AKK I L ++L++ L RF + + S
Sbjct: 675 EYLP-YKADS-GND--VEAKKQAFIDRLPQVLLIQLKRFEFVNNNSERRELVNYNAYNGR 730
Query: 284 --KLHKSVRFPLQLVLGRDLLVTPSAE------GRKYELVATVTHHGRDPSKGHYTADAR 335
K+ K +++ L + ++ L + +A+ Y+L V HHG S GHYTAD
Sbjct: 731 IEKICKWIKYDHDLTIPKEALSSINAKFLFSDNDTSYKLTGVVYHHGLSSSGGHYTADVL 790
Query: 336 YFNDQ-WLHFDDASVTAIGTSKVL-------HDQ-AYVLFYKQV 370
+ +++ W DD +VT I +V+ H + AY+L Y++
Sbjct: 791 HQDEEKWYRIDDTTVTEINKEEVVTGGEEGSHSRTAYILIYQRA 834
>gi|348669889|gb|EGZ09711.1| hypothetical protein PHYSODRAFT_564244 [Phytophthora sojae]
Length = 625
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 132/445 (29%), Positives = 196/445 (44%), Gaps = 93/445 (20%)
Query: 2 KAINEPVKSV------KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK 55
+AI E +K + K++ RGL+N GN CF N +Q++++C PF+ LL E+ P
Sbjct: 104 EAIQETLKGLDVSAPAKEMKKRGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISAATAPT 163
Query: 56 ----AGYPTLTAF---VGFVSDFDTPS------GGSSKKKNISVLDIGRPFS---PSMFE 99
A T A+ V F +F+ P+ +S ++N + + P + F
Sbjct: 164 SEMMASTSTFKAWRHMVAFAREFEEPTLAQLHLQAASGERNPNDMHGKVPQAIRISGYFM 223
Query: 100 AVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQGESTSING 149
VL F R QEDA EFL F ++ +H E K Q + ++
Sbjct: 224 DVLSAFQ-------KMRGEQEDALEFLEFFLEYLHSEYEKSGLELPASCEEQTKRSAAKK 276
Query: 150 ANTALV------SLAEEDEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLKSVVKAQG 201
N A+V + A +D W VG K KS+V R + S ++ +F G L+S +K G
Sbjct: 277 QNGAVVDADLENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALRSELKQNG 336
Query: 202 NKASA-TVQPFLLLHLDIYSEAVH------------------TIEDALRLFSAPENLEGY 242
+ S+ TV+PF LHL++ EA TIE+ +R E +E
Sbjct: 337 KRQSSITVEPFHCLHLNLDYEAQDPSFVTGANGLAKPLSTPITIEEMIRKSFDVEVIEDV 396
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVL---- 297
V T KK +++L +L L + RF+Y QG KL + V++P L
Sbjct: 397 NQ-------VPTMKKFTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYPPSLEFPTQF 449
Query: 298 ---------GRDLLVTPSAEGR------KYELVATVTHHGRDPSKGHYTADARYFNDQWL 342
G D+ S G YEL A V+H G+ GHYT R DQW
Sbjct: 450 MSTTCRAENGMDIPGVASISGAGFSTPPMYELFAVVSHLGKFVVGGHYTCVCRDNKDQWF 509
Query: 343 HFDDASVTAIGTSKVLHDQAYVLFY 367
+DD VT+I + L + AY+LFY
Sbjct: 510 RYDDEHVTSISEATALSETAYLLFY 534
>gi|367001536|ref|XP_003685503.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
gi|357523801|emb|CCE63069.1| hypothetical protein TPHA_0D04350 [Tetrapisispora phaffii CBS 4417]
Length = 854
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 130/454 (28%), Positives = 198/454 (43%), Gaps = 106/454 (23%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPT---LTAFVG 66
+K+++PRG+INS N+CF+++ LQ L+SC+PF+ +L + +I K G L A +
Sbjct: 413 IKNIVPRGIINSANICFMSSVLQVLLSCAPFINILNVVSINSNIMKPGVNQTKLLDACIK 472
Query: 67 FVSDFDTPSGGSSKKKN-----------ISVLDIGRPFSPSMFEAVLKNFTP--DVPNSI 113
S FD S + K+K SP F VL + D+
Sbjct: 473 LYSRFDKESFEAEKEKEKDNESSSKKQSSQYNAKATAISPEEFYKVLSTISKFKDL---- 528
Query: 114 SGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------- 160
QEDA+EFL+ ++DQ+H+E + + ES + N + S+++E
Sbjct: 529 -KWGHQEDAEEFLTHLLDQLHEEFISV-IESLTNNEVMNLINSISDEELKIFVIKNIAQY 586
Query: 161 ----------------------------DEWETVGPKNKSAVT------RTQSFLPSALS 186
D W V +K RT PS +S
Sbjct: 587 TKAGFNKTPSPQLKALLNKYSSSIESEGDGWHEVSGSSKKGKKTKTAAKRTVEVEPSPIS 646
Query: 187 DIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 244
++FGGQ +SV+ NK S T+ PF + LDI + TIE A + FS E L ++
Sbjct: 647 NLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKETDTIESAFKKFSEYE-LLPFKA 705
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------KLHKSV 289
SS GN V AKK I L ++L++ L RFS+ + K+ K +
Sbjct: 706 SS-GND--VEAKKQTFIDRLPQVLLVQLKRFSFVNNEDKDNNMMNYNSINGRIEKIRKKI 762
Query: 290 RFPLQLVLGRDLLV--TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN---DQWLHF 344
+ +LV+ + L + S RKY+L + HHG GHYTAD FN D+W
Sbjct: 763 SYGHELVIPEESLSPHSWSQTNRKYQLTGVIYHHGLSSDGGHYTADV--FNKTADKWYRI 820
Query: 345 DDASVTAIGTSKVLHD--------QAYVLFYKQV 370
DD ++T + VL AY+L Y+++
Sbjct: 821 DDINITELKKDDVLKGGEDGTDTRTAYILMYQKL 854
>gi|361129295|gb|EHL01207.1| putative ubiquitin carboxyl-terminal hydrolase 3 [Glarea lozoyensis
74030]
Length = 608
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 174/375 (46%), Gaps = 61/375 (16%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+SC PF L ++ R K+ P + A + F+ ++
Sbjct: 178 LKPRGLVNTGNMCYMNSVLQVLVSCVPFYSFLDQVGKRAAHSFKSDTPLIDAMIMFMREY 237
Query: 72 DTPSGGSS------KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
S + K + D G F P V K+ T
Sbjct: 238 PVIDSAVSVEKLRMRLKQGELEDYGEAFIPEFVYDVTKHLT------------------- 278
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTAL-----------VSLAEEDEWETVGPKNKSAV 174
F ++H+E ++ STS + + A A E+ W VG K K++
Sbjct: 279 -RFSAMRLHEECERIMRASTSNSASAIATPKNNPASPTEDAPSANENGWLEVGRKQKAST 337
Query: 175 TRTQSF--LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
T++ +PS +++IFGG+L++ V+ G S T+ F L LDI + V+ I +AL+
Sbjct: 338 TQSSGIIAIPSPITNIFGGKLRTEVRRPGQTDSVTITHFETLQLDIGAPNVNNIVEALKG 397
Query: 233 FSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVR 290
S E LE +S G K + +L +LILHL RF Y + ++K+ K V
Sbjct: 398 LSRSEILE----TSAGRGA-----KQDFLDSLPSVLILHLKRFQYDEKTNATSKIWKKVG 448
Query: 291 FPLQLVLGRDLLVTPSAEG-------RKYELVATVTHHGRDPSKGHYTADARYFND-QWL 342
+PL L + +++ T G +Y L A V HHG++ S GHYT D R + +W+
Sbjct: 449 YPLDLEIPKEVF-TRQKRGVYSHGGLPRYRLTAVVYHHGKNASGGHYTVDVRRQDGREWI 507
Query: 343 HFDDASVTAIGTSKV 357
DD V + + V
Sbjct: 508 RIDDTLVRRVRSEDV 522
>gi|409081963|gb|EKM82321.1| hypothetical protein AGABI1DRAFT_124803 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 753
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 144/283 (50%), Gaps = 33/283 (11%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQ-------GESTSINGANTALVSLAEE------DEWE 164
+QEDA+EFL F +D + +ELL +Q +++ V EE D W
Sbjct: 472 QQEDAEEFLGFYLDTLEEELLSIQHSLAPPPQKTSKQQQHQPHPVEEKEELEPPVGDGWL 531
Query: 165 TVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVH 224
VG KN+ +TRT S ++ +FGG+ KS +KA G K S V+ + L LD+ +++H
Sbjct: 532 EVGKKNRMIITRTIKAAESPITRMFGGKFKSTLKAPGQKDSVLVEDWRSLRLDVQPDSIH 591
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GS 282
TI++AL + P++++ S G + A + V ++ L +L+LH+ RF Y G
Sbjct: 592 TIQEALTQITHPQSIQMTHPSQPGI--TIDANQKVLVEALPPVLVLHVKRFWYDVTVGGV 649
Query: 283 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA----RY-- 336
K+ K VRF +L +G D++V P KY L + HHG S GHYT D RY
Sbjct: 650 VKVMKQVRFEPELEIGSDMMV-PGKRSTKYRLFGAIYHHGHSASGGHYTLDILHQNRYPG 708
Query: 337 --FNDQWLHFDDASVTAIGTSKVLH-------DQAYVLFYKQV 370
+ W+ DD V+ + + V + AY+LFY+++
Sbjct: 709 AKLREGWIRIDDELVSDVRSEDVFNAWDKDEMRNAYLLFYRRI 751
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL 48
RGLINSGN+CF NA LQ L+ C+PF +L EL
Sbjct: 288 RGLINSGNMCFANAVLQVLVYCAPFRRLFIEL 319
>gi|344230727|gb|EGV62612.1| hypothetical protein CANTEDRAFT_115137 [Candida tenuis ATCC 10573]
Length = 428
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 118/421 (28%), Positives = 181/421 (42%), Gaps = 102/421 (24%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQL---LQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
RGL NSGN+C++N+ LQ L+ C PF +L L++ T + ++ P + A + DF T
Sbjct: 43 RGLTNSGNICYMNSILQVLIYCEPFNKLFRILEQKSTGSLNESKTPLIDAIISIFRDFST 102
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--------QEDAQEF 125
SG S SP F L SG + QEDA+EF
Sbjct: 103 -SGTKS-------------LSPEGFYMKL-----------SGHRKFQHLKWGQQEDAEEF 137
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------------------- 160
L +++D +H+EL+ SI N +SL E
Sbjct: 138 LGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKIIKKLNNSS 191
Query: 161 ---------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSVVKAQGNK- 203
+ W +G +K + RT PS + IFGGQ +SV++ K
Sbjct: 192 NGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSVLQIPNKKD 251
Query: 204 ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQT 263
S T+ PF + LDI ++ ++ IEDA + + PE + + V AKK I +
Sbjct: 252 QSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLAKKQTFIDS 307
Query: 264 LSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLLVT-PSAEGRKYELVATVT 319
L +L++HL RFS+ + + KL K + + +L + +L + R Y+L V
Sbjct: 308 LPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELFSNWRKSVNRDYKLTGVVY 367
Query: 320 HHGRDPSKGHYTADARY-----FNDQWLHFDDASVTAIGTSKVLHD-----QAYVLFYKQ 369
HHG GHYT D + +W+ DD S+ I VL + AY+LFY++
Sbjct: 368 HHGIIAEGGHYTCDVLRPMTVSDSSRWIRIDDTSINNIDEDDVLSNDDDTKNAYLLFYQK 427
Query: 370 V 370
+
Sbjct: 428 L 428
>gi|149235975|ref|XP_001523865.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452241|gb|EDK46497.1| hypothetical protein LELG_04678 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 942
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 191/412 (46%), Gaps = 78/412 (18%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVGFVS 69
D+ P+GL N+GN+CF+N+ LQ L+ C PF +LL+ + T+ I + + P L A + +
Sbjct: 555 DVKPKGLTNTGNICFMNSILQILLYCQPFNRLLKLIETKSISELVNSSLPLLDATIKLFN 614
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
DF P S +I+ P P + A+ K+ S +QEDA+EFL +
Sbjct: 615 DFK-PVHSDSSNGSINNGKAAVPIEP-FYHALSKHSK----FSHLRWGQQEDAEEFLGYY 668
Query: 130 MDQMHDELLKLQGESTSINGANTALVSL-------------------------------- 157
+D +++E L T++ NT+ V
Sbjct: 669 LDALNEEFL------TALRRLNTSQVDTLIQSYSQEDSHELTKFKYNVKTCIRRIKKEND 722
Query: 158 -AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGNKASATVQPFLL 213
+EDEW VG K VT+ + P+ L+ IFGG+ KS++ K + S T+ PF
Sbjct: 723 GEDEDEWNQVGAKKN--VTKVE-VEPTPLNMIFGGEFKSIITIPKGSSFQKSITIDPFQQ 779
Query: 214 LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLM 273
L LDI +I+DA + E++ + + N + KK + L ++LI+HL
Sbjct: 780 LQLDI--SQSDSIDDAFLHLNEVESI----SYMSNNNSELQVKKQTFVSKLPEVLIIHLK 833
Query: 274 RFSYGSQGST---KLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATVTHHGRDPS 326
RFSY KL K V + +L + +L SAE + Y+L + V HHG +
Sbjct: 834 RFSYLKDQEVAIEKLKKLVAYNHKLSVPSQIL---SAEAQASVSTYQLSSVVYHHGANAD 890
Query: 327 KGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHD-------QAYVLFYKQV 370
GHYT+D Y QW DD V +I ++VL+ AY+L Y+++
Sbjct: 891 TGHYTSDIYDYELKQWWRIDDTIVNSIKANEVLNSGNDENSKNAYILVYEKI 942
>gi|349577813|dbj|GAA22981.1| K7_Ubp3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 912
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 200/461 (43%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 PF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYDHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|256272053|gb|EEU07065.1| Ubp3p [Saccharomyces cerevisiae JAY291]
Length = 912
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/462 (26%), Positives = 201/462 (43%), Gaps = 106/462 (22%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFV 65
+V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 453 AVHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACL 512
Query: 66 GFVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGR 116
FD + + + + D + F+ A PD ++S
Sbjct: 513 TMYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTI 572
Query: 117 PR--------QEDAQEFLSFIMDQMHDELLK-------------LQ-------------- 141
P+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 573 PKFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRN 632
Query: 142 ----GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSF 180
G++ I A+ L L EE+ W V G K K+A RT
Sbjct: 633 LSRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEI 692
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E
Sbjct: 693 VPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYEL 752
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST--------------- 283
L SS+GN V AKK I L ++L++ RFS+ + +
Sbjct: 753 LP--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIE 808
Query: 284 KLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARY 336
K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 809 KIRKKIKYDHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYH 868
Query: 337 F-NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 869 REHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|326472284|gb|EGD96293.1| ubiquitin C-terminal hydrolase [Trichophyton tonsurans CBS 112818]
Length = 879
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 143/263 (54%), Gaps = 23/263 (8%)
Query: 116 RPRQEDAQEFLSFIMDQMHDELL-----KLQGESTSINGANTALVSLAEE---DEWETVG 167
R Q+DAQEFL F+++++HDE L + +S ++ S+A++ D W VG
Sbjct: 500 RGHQQDAQEFLGFLLEELHDECLLATKNAMADKSDVSTSSDMDAHSIADDSTGDGWLEVG 559
Query: 168 PKNKSAVTRT--QSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
K K++VTR+ S S ++ IF G+++S + GNK S T++P+ L LDI S V+
Sbjct: 560 HKQKASVTRSSGDSSGESPITRIFSGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNN 619
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGST 283
I DAL+ + PE + G SS G V A K V I+ L +LILHL RF Y + G+
Sbjct: 620 IIDALKGLTKPETMHGDFQSSRGPK--VNATKQVFIENLPPVLILHLKRFQYDNVTNGTQ 677
Query: 284 KLHKSVRFPLQLVLG--------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR 335
K+ K + +PL+L + R+ L + KY L+ + HHG+ S GHYT + R
Sbjct: 678 KIWKKIGYPLELEIPKEVFPPHRRNALSVQNGSLPKYRLIGVIYHHGKSASGGHYTVEVR 737
Query: 336 YFND-QWLHFDDASVTAIGTSKV 357
+ +W+ FDD + + + +V
Sbjct: 738 RQDGREWVRFDDTYIRRVRSEEV 760
>gi|151944869|gb|EDN63128.1| ubiquitin-specific protease [Saccharomyces cerevisiae YJM789]
gi|190405710|gb|EDV08977.1| ubiquitin carboxyl-terminal hydrolase 3 [Saccharomyces cerevisiae
RM11-1a]
Length = 912
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 200/461 (43%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 P--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|398364935|ref|NP_011078.3| Ubp3p [Saccharomyces cerevisiae S288c]
gi|401244|sp|Q01477.1|UBP3_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|173130|gb|AAA35191.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae]
gi|603391|gb|AAB64678.1| Ubp3p: ubiquitin-specific protease [Saccharomyces cerevisiae]
gi|285811784|tpg|DAA07812.1| TPA: Ubp3p [Saccharomyces cerevisiae S288c]
Length = 912
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 200/461 (43%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 P--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|146420045|ref|XP_001485981.1| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
6260]
Length = 726
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 182/409 (44%), Gaps = 83/409 (20%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 73
+GL N+GN+C++NA LQ L+ C PF ++L+ + T+ + K+ P L A + F D
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P + + SP F ++ D + + +QEDA+EFL+ +D +
Sbjct: 403 P--------------LKKALSPDDF--YMRLIAHDKFSHLKWG-QQEDAEEFLNLFLDGL 445
Query: 134 HDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKSA 173
+E +L+ G+ T A+ + ++ + W V K++
Sbjct: 446 REEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKAS 505
Query: 174 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALR 231
RT PS +S IFGGQ +SV++ +K S T+ PFL + LDI +++ TIEDA
Sbjct: 506 AKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFLCVPLDISDDSITTIEDAFV 565
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLHK 287
F E L ++ V AKK I L IL++ L RF Y + G KL K
Sbjct: 566 RFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFLYQLGENAGGIEKLKK 616
Query: 288 SVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTAD-------- 333
V + L L + L +P+ A + Y L+A V HHG GHYT D
Sbjct: 617 KVAYSHTLTLPNECL-SPALRKHAGAGSKTYRLLAVVYHHGVGAEGGHYTCDVLRKLSLY 675
Query: 334 -------ARYFNDQWLHFDDASVTAIGTSKVLH------DQAYVLFYKQ 369
+ + +W+ DD + + +VL AY+L Y++
Sbjct: 676 DHEHESEGKMVDAEWIRIDDTHIEVVERDEVLEGSEDSTKNAYILMYQR 724
>gi|190345632|gb|EDK37554.2| hypothetical protein PGUG_01652 [Meyerozyma guilliermondii ATCC
6260]
Length = 726
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 181/410 (44%), Gaps = 85/410 (20%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDT 73
+GL N+GN+C++NA LQ L+ C PF ++L+ + T+ + K+ P L A + F D
Sbjct: 343 KGLTNTGNICYMNAVLQVLLYCEPFNRMLKAIETKTAASLGKSDTPLLDATIKFFEDMSE 402
Query: 74 PSGGSSKKKNISVLDI-GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
PS KK +S D R + F + +QEDA+EFL+ +D
Sbjct: 403 PS-----KKALSPDDFYMRLIAHDKFSHLKWG-------------QQEDAEEFLNLFLDG 444
Query: 133 MHDE---------------LLKLQGESTSINGANTALVSLAEEDE-----WETVGPKNKS 172
+ +E +L+ G+ T A+ + ++ + W V K+
Sbjct: 445 LREEFIAVVRGLTPEQVNRVLEHGGDETYRQNVKAAVNMIQKKKDDNDEGWNEVAGTKKA 504
Query: 173 AVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDAL 230
+ RT PS +S IFGGQ +SV++ +K S T+ PF + LDI +++ TIEDA
Sbjct: 505 SAKRTVQVEPSPISMIFGGQFRSVLQVPKSKEAQSITLDPFSCVPLDISDDSITTIEDAF 564
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY----GSQGSTKLH 286
F E L ++ V AKK I L IL++ L RFSY + G KL
Sbjct: 565 VRFGETEEL-AFKE--------VVAKKQTFIDQLPPILLIQLKRFSYQLGENAGGIEKLK 615
Query: 287 KSVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTAD------- 333
K V + L L + L +P+ A + Y L A V HHG GHYT D
Sbjct: 616 KKVAYSHTLTLPNECL-SPALRKHAGAGSKTYRLSAVVYHHGVGAEGGHYTCDVLRKSSL 674
Query: 334 --------ARYFNDQWLHFDDASVTAIGTSKVLH------DQAYVLFYKQ 369
+ + +W+ DD + + +VL AY+L Y++
Sbjct: 675 YDHEHESEGKMVDAEWIRIDDTHIEVVERDEVLEGSEDSTKNAYILMYQR 724
>gi|444315796|ref|XP_004178555.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
gi|387511595|emb|CCH59036.1| hypothetical protein TBLA_0B01930 [Tetrapisispora blattae CBS 6284]
Length = 1019
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 197/466 (42%), Gaps = 115/466 (24%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK----AGYPTLTAFVG 66
+K ++PRG+IN+ N+CF+++ LQ L+ C PF+ +L + R+ + + + A V
Sbjct: 563 IKSIVPRGIINNANICFMSSVLQVLLYCKPFIDILNVISLRNTNSKSNASSFKLIDACVE 622
Query: 67 FVSDFDTPS----------------GGSSKKKNISVLDIGR------PFSPSMFEAVLKN 104
F FD + GS+ K+ + P +P F + L
Sbjct: 623 FYKQFDEETVAKEKLDAINKTTLQDAGSNNKQKAHSASVNNNNGNPSPLNPEQFYSALST 682
Query: 105 FTP--DVPNSISGRPRQEDAQEFLSFIMDQMHDELL---------KLQGESTSINGANTA 153
D+ G QEDA+EFL+ ++DQ+H+E + ++Q S+N +
Sbjct: 683 IYKFKDL-----GWGHQEDAEEFLTHMLDQLHEEFIAGIYFLTDNEIQNLLQSVNDPDLK 737
Query: 154 LV-----------------------------SLAEEDE-----WETVGPK------NKSA 173
+ S+ + +E W V +SA
Sbjct: 738 IYFIRCLSQYKKAEFMKNISSSLKELISKYGSINDTNEDGSNGWHEVSSSSKKGKKTRSA 797
Query: 174 VTRTQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALR 231
RT S +S +FGGQ +SV+ NK S T+ PF + LDI AV+ ++ A +
Sbjct: 798 AKRTFEIESSPISCLFGGQFRSVLDVPSNKESQSITLDPFQTIQLDISDPAVNDLDSAFK 857
Query: 232 LFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-------- 283
FS E + +++SS + V AKK I L +L++HL RFS+ +
Sbjct: 858 KFSEFEFIP-FKSSSGAD---VEAKKQTFIDKLPTVLLIHLKRFSFINNTDKDNSMANYN 913
Query: 284 -------KLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTHHGRDPSKGHYTAD 333
K+ K + + +LV+ + + + E R YEL V HHG GHYTAD
Sbjct: 914 AYHGRIEKIRKKISYNHELVIPAETITNGKQLAPENRTYELTGVVYHHGLSSDGGHYTAD 973
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQV 370
+ D+W DD +VT + VL AY+L Y+++
Sbjct: 974 IYHKEVDKWYRIDDVTVTELEKDDVLKGGENSTDSRTAYILMYQKL 1019
>gi|320168898|gb|EFW45797.1| hypothetical protein CAOG_03781 [Capsaspora owczarzaki ATCC 30864]
Length = 517
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 171/334 (51%), Gaps = 37/334 (11%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTRDIPKAGYPTLTAFVGFVS 69
++ PRGL+N GN C++N LQ L++ P LL ELR+ + + Y A
Sbjct: 95 REFQPRGLVNKGNACYINTVLQVLLATPPVHALLHHAELRSFLLQQNAYDEYLA-----R 149
Query: 70 DFDTPSGGSSKKKNISVLDIGR-----------------PFSPSMFEAVLKNFTPDVPNS 112
+P+ + + + + + R PF + + + + +S
Sbjct: 150 TMRSPAAVTDRVSRLLLFSLARLSHEFKILTPQAALKEGPFGQPLLPGYVHDAVVHLRSS 209
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELL----KLQGESTSINGANTALVSLAEEDEWETVGP 168
S + RQEDA+EFL F++D++H+EL+ K S+S + + A+ S A E EWE VG
Sbjct: 210 DSFQFRQEDAEEFLGFVLDRLHNELVGEMRKSAHFSSSYDVSAAAITSGAAE-EWEEVGK 268
Query: 169 KNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIED 228
KNK+AVTR S +S IF G L+S VK +G KAS T+QPF L L+I +V+++ D
Sbjct: 269 KNKTAVTRRLDQEASPISQIFRGFLRSSVKQRGVKASDTLQPFYTLPLEITHHSVNSVVD 328
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHK 287
ALR+ PE++ G+ + + +A A K + ++ L IL+L L RF Y G K K
Sbjct: 329 ALRVHVLPESISGF--ARSKDALDNEASKQLLLEELPPILVLQLKRFVYDLYGGVQKSLK 386
Query: 288 SVRFPLQLVLGRDLLVTPS-----AEGRKYELVA 316
V +P L L +L P+ + R+Y L+A
Sbjct: 387 FVEYPATLDLSTELFSLPARSKYGPKQRQYRLLA 420
>gi|207345812|gb|EDZ72512.1| YER151Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 912
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 199/461 (43%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKEIYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 P--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|301113318|ref|XP_002998429.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262111730|gb|EEY69782.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 620
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/430 (28%), Positives = 187/430 (43%), Gaps = 76/430 (17%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA------- 56
++ P K +K RGL+N GN CF N +Q++++C PF+ LL E+ + P A
Sbjct: 119 VSSPAKEMKK---RGLVNQGNTCFQNVIMQSVLACPPFLNLLAEISSTSPPTAEMLASTS 175
Query: 57 GYPTLTAFVGFVSDFDTPS------GGSSKKKNISVLDIGRPFS---PSMFEAVLKNFTP 107
+ V F +F+ P+ ++ ++N++ + P + F VL F
Sbjct: 176 TFKAWRHMVAFTREFEEPTLAQLQLQAANGERNLNDMHGKTPQAIRISGYFMDVLSAFQ- 234
Query: 108 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLK----------LQGESTSINGANTALVSL 157
R QEDA EFL F ++ +H E K Q + A A +
Sbjct: 235 ------KMRGEQEDALEFLEFFLEYLHTEYEKSGLELPSSCEKQTKRRPSTAAKPAEADV 288
Query: 158 AEE------DEWETVGPKNKSAVTRTQSF--LPSALSDIFGGQLKSVVKAQGNKASA-TV 208
A E D W VG K KS+V R + S ++ +F G L+S +K G + S+ TV
Sbjct: 289 AFENAQAFDDGWAEVGKKGKSSVLRQNPVDTIRSPINWLFKGALRSELKQNGKRQSSITV 348
Query: 209 QPFLLLHLDIYSEA-----VHTIEDALRLFSAPENLE-----GYRTSSTGNAGVV-TAKK 257
+PF LHL++ E V + + SAP ++ + +A + T KK
Sbjct: 349 EPFHCLHLNLDYETQDPSFVTGVYGLAKPLSAPITIQDMIRKSFDVEVIEDANQIPTMKK 408
Query: 258 SVKIQTLSKILILHLMRFSYG-SQGSTKLHKSVRFPLQLVLGRDLLVT----------PS 306
+++L +L L + RF+Y QG KL + V++P L + T P
Sbjct: 409 FTTVESLPVVLTLSVKRFTYHPEQGPVKLQQFVKYPPFLEFPTQFMSTTCRAENGMDVPG 468
Query: 307 AEGRK---------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
A YEL A V+H G+ GHYT R DQW +DD VT+I +
Sbjct: 469 AAAISGAGFSTPPMYELFAVVSHLGKFVIGGHYTCVCRDNKDQWFRYDDEHVTSISEATA 528
Query: 358 LHDQAYVLFY 367
L + AY+L Y
Sbjct: 529 LSETAYLLLY 538
>gi|296810276|ref|XP_002845476.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
gi|238842864|gb|EEQ32526.1| ubiquitin-specific protease [Arthroderma otae CBS 113480]
Length = 863
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 181/361 (50%), Gaps = 47/361 (13%)
Query: 20 INSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSS 79
++ GN+C++N+ LQ L+ C PF + L ++ R A F SD S
Sbjct: 412 LSRGNMCYMNSILQVLIFCVPFYEFLDQIGRR-----------AAHSFKSD--------S 452
Query: 80 KKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK 139
+ V+D S E + + R Q+DAQEFL F+++++H+E L
Sbjct: 453 PLVDAMVIDAA-----SSVEKLRLRLKQNELEEDMRRGHQQDAQEFLGFLLEELHEECLH 507
Query: 140 -----LQGESTSINGANTALVSLAEE---DEWETVGPKNKSAVTRT--QSFLPSALSDIF 189
+ +S + ++ S+ +E D W VG K K++VTR+ S ++ IF
Sbjct: 508 ATKNAIADKSDASTSSDVDAHSIGDESTGDGWLEVGHKQKASVTRSSGDGSGESPITRIF 567
Query: 190 GGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
G+++S + GNK S T++P+ L LDI S V+ I DAL+ + PE + G SS G
Sbjct: 568 SGKIRSEFRVPGNKNSVTLEPYQSLQLDIGSPQVNNIIDALKGLTKPETMHGDFQSSRGP 627
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLLV---- 303
V A K V I+ L +L+LHL RF Y + G+ K+ K + +PL+L + +++
Sbjct: 628 K--VNATKQVFIEHLPPVLVLHLKRFQYDNVTNGTQKIWKKIGYPLELEIPKEVFPPHRR 685
Query: 304 -TPSAEG---RKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVL 358
T SA+ KY L+ + HHG+ S GHYT + R + +W+ FDD + + + +V
Sbjct: 686 NTLSAQNGSLPKYRLIGVIYHHGKSASGGHYTVEVRRQDGREWVRFDDTYIRRVRSEEVA 745
Query: 359 H 359
+
Sbjct: 746 Y 746
>gi|427794549|gb|JAA62726.1| Putative ubiquitin carboxyl-terminal hydrolase 10, partial
[Rhipicephalus pulchellus]
Length = 741
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 21/246 (8%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKA-GYPTLTAFVGFVSDF 71
+ PRGL N N C++NA LQAL++C F LL L +P + P + + F+ +
Sbjct: 450 IQPRGLENGKNWCYINANLQALLACPAFYNLLYSLPLVPGLPGSNATPFMECLIYFLQTY 509
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
P + KK+ L + + + P F +L PD + +QEDA+EFLSF+++
Sbjct: 510 AVPMVRETGKKD--ELVVAKAYDPEHFRDLLMKIKPDC-----KKGKQEDAEEFLSFMLN 562
Query: 132 QMHDELLK-LQGESTSING---------ANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
+HDE++ ++ S +NG A +E W+TV +N+ VTR+ +L
Sbjct: 563 GLHDEMVSSMRSVSNGLNGQCNGEAQPPVEHADDDDDDEGAWKTVIHRNRHQVTRSAEYL 622
Query: 182 PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG 241
PS L DIFGG+++S V A G + SA++QPF L LDI + V T+EDAL +A E ++
Sbjct: 623 PSPLMDIFGGEMRSSVTADG-ETSASLQPFFTLQLDI-QDGVKTVEDALLHLAAEEKVQN 680
Query: 242 YRTSST 247
Y +S +
Sbjct: 681 YHSSKS 686
>gi|354543189|emb|CCE39907.1| hypothetical protein CPAR2_603260 [Candida parapsilosis]
Length = 907
Score = 137 bits (345), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 119/408 (29%), Positives = 196/408 (48%), Gaps = 74/408 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGF 67
V D+ P+GL N+GN+CF+N+ LQ+L+ C PF +LL+ + T+ D+ ++ P + A +
Sbjct: 525 VFDIKPKGLTNTGNICFMNSILQSLLYCKPFNKLLKLIETKSIGDLVESSQPLIDATIKL 584
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
++F S K +S+ PF ++ + K F + G +QEDA+EFL
Sbjct: 585 FNEF----KPSDNKLPVSI----EPFYSAL--SKHKKFQ----HLKWG--QQEDAEEFLG 628
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEED-------------------------- 161
+ +D +++E++ L + + + + S ++D
Sbjct: 629 YYLDALNEEMI-LALKKLNTPQVDQLIQSYTQDDVAKFKYNVKTCIRKIKKDDDQEDEEN 687
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV---KAQGN-KASATVQPFLLLHLD 217
EW VGPK +T+ + P+ L+ IF G+ KSV+ K N + S T+ PF + LD
Sbjct: 688 EWNEVGPKKN--ITKIE-VDPTPLNMIFSGEFKSVITIPKPSSNFQKSITLDPFQHVQLD 744
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I + ++IE+A + E + Y+ N V KK I+ L ++LI+HL RFSY
Sbjct: 745 ISNS--NSIEEAFLHLNELETI-SYK---GNNNKEVEVKKQTFIERLPQVLIIHLKRFSY 798
Query: 278 GSQGST---KLHKSVRFPLQLVLGRDLL-------VTPSA-EGRKYELVATVTHHGRDPS 326
KL K++ + L + ++L P+ KY+L + V HHG
Sbjct: 799 SKDQENAIEKLAKNISYDHTLTIPNEILSQQQQQQQQPAPLTSFKYQLTSVVYHHGSSAD 858
Query: 327 KGHYTADARYF-NDQWLHFDDASVTAIGTSKVLH---DQAYVLFYKQV 370
GHYT+D F N+QW DD V I +VL + AY+L Y ++
Sbjct: 859 AGHYTSDTFDFENNQWWEIDDTIVKPIKDDEVLSSGINNAYILLYSKI 906
>gi|385302493|gb|EIF46622.1| ubiquitin-specific protease [Dekkera bruxellensis AWRI1499]
Length = 714
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/443 (26%), Positives = 180/443 (40%), Gaps = 101/443 (22%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFD 72
P GLIN+ ++C++N+ LQ L C PF Q+L +R I ++ P + A + + D
Sbjct: 285 PHGLINTSSICYMNSVLQMLFECEPFSQVLNIIRBSTMGSIGESKMPLVDALL-MLQDLF 343
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+K +V+ P F +K N G RQEDA+EFL +++D
Sbjct: 344 KKKRIPAKSITSTVIPRRXSIDPMPFYTAIKKLD-RFSNLEWG--RQEDAEEFLGYLLDG 400
Query: 133 MHDELL-------------------------KLQGESTSI-----NGANTALVSLAEEDE 162
+H+E + K++ TSI G T + E
Sbjct: 401 LHEEFITSIEDMPLSAAQXFENGLTDPVAVEKVRYAVTSIKNSKGKGCGTEERQEPDGHE 460
Query: 163 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDIYSE 221
W V K +V R+ F PS ++ +FGGQ +SV++ + K+S T+ PF+ + LDI
Sbjct: 461 WNEVSANRKISVKRSFEFKPSPIALLFGGQFRSVLQPSNTKKSSVTLDPFMHIQLDISDA 520
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY---- 277
T+E A FS E + + GN +A+K I L ILI+HL RFS+
Sbjct: 521 TTSTLEGAFEKFSEIEEI------TFGNQ---SARKQNLIDKLPMILIIHLKRFSFVKRD 571
Query: 278 -------------------------------------GSQGST-KLHKSVRFPLQLVLGR 299
S+G K+ K + + +L L
Sbjct: 572 QSENEADAYEIVSSKQKKRKHXKQTKEQELMLSDFKGASEGHIEKISKPIAYKAKLTLPS 631
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
+ T Y+LV + HHGR GHYT D W+H DD +T I VL
Sbjct: 632 SCISTSIEGNXTYKLVGVIYHHGRSAEGGHYTVDVLEPTGGWIHIDDTLITHITEGDVLE 691
Query: 360 D------------QAYVLFYKQV 370
+ AY+L Y+++
Sbjct: 692 NGIKGGDLTNNSKSAYLLMYQRL 714
>gi|393245707|gb|EJD53217.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 826
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 132/419 (31%), Positives = 194/419 (46%), Gaps = 78/419 (18%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL-----------------------RT 50
+ PRGLIN GNLCF NA LQAL+ C+PF +L EL R
Sbjct: 415 IRPRGLINGGNLCFANAILQALVYCTPFHRLFVELGRLSAAAAAAPATQSKLRGAVGARL 474
Query: 51 RDIPKAGYPTLTAFVGFVSDF-DTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKN--- 104
P P + A + F+ +F P+ +S++++ + G F P+ LK
Sbjct: 475 GATPT---PLVDATINFLDEFAPVPAQTASEERDRARSPSGDSDAFIPTYIYDALKEKKR 531
Query: 105 FTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSINGANTALVSLA 158
F +S+ R QEDA+EFL F +D + +ELL L + G A +
Sbjct: 532 F-----DSMR-RGHQEDAEEFLGFYLDTLEEELLALLADLSPAASGSKQPGPVAAKSEVV 585
Query: 159 EE---------DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGN-KASATV 208
EE + W VG +N++ V S +S +FGG+ +SV++ G + S V
Sbjct: 586 EESGSELGVNEEGWTEVGRRNRAVVVTNIKTTESPISRVFGGKFRSVLRTPGTGRDSVMV 645
Query: 209 QPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKIL 268
Q + L LDI V++I DALR SAPE ++ +S+ A K V++ L +L
Sbjct: 646 QDWNRLQLDIQPPHVNSITDALRNLSAPELVQVGPSST-------EATKQVQLDVLPAVL 698
Query: 269 ILHLMRFSYG----SQGSTKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHG 322
+LHL RF+Y G K K + F +L G D++ SA +Y+L A V HHG
Sbjct: 699 VLHLKRFAYDPTLGGGGVVKNGKRIAFEPELEFGNDVMAPARRSARPPRYKLYAVVYHHG 758
Query: 323 RDPSKGHYTAD-----ARYFNDQWLHFDDASVTAIGTSKVL-HD-----QAYVLFYKQV 370
+ + GHYT D + W+ DD ++ + T V HD AY+LFY+ V
Sbjct: 759 QSATGGHYTLDVLHPAPGHVGTPWVRLDDDIISRVRTEDVFGHDGADDKSAYLLFYRPV 817
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 170/355 (47%), Gaps = 26/355 (7%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+++QAL + P + +L ++I L++ V F
Sbjct: 69 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHIKEINPEN--PLSSQGNIVKSFAQLIR 126
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+K + D + P+ F + + N+ P I QEDA EF++F++D +H++
Sbjct: 127 LLWQKVDQYQYDDMKVLKPTQFISTVGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 181
Query: 137 LLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L +++ + T + + D EW+ +N+S + D+F GQ+
Sbjct: 182 LNRIKKKPYVEQAKFTKFPTNEDADAEWKKYLSRNQSIIV-----------DLFQGQMLD 230
Query: 196 VVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
+ K+S +PF+ L + + + +++ + F E L+G + N
Sbjct: 231 TLSCLTCKSSRYCFEPFMYLSVPVLNRECE-LQECIEEFLKKETLKGDEGWNCTNCNQRR 289
Query: 255 -AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
+ K + + ++ ILI+HL RF + SQ K+ V++PLQ + +L+ T E Y+
Sbjct: 290 DSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVKYPLQNLSFENLVCTKQVEKPTYD 349
Query: 314 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G S GHYTA + +D W HF+D+ VT + + L+D AY+LFY
Sbjct: 350 LYAVINHSGTLTS-GHYTAYGKNRDDLHWYHFNDSLVTPVQQPESLND-AYLLFY 402
>gi|313242252|emb|CBY34415.1| unnamed protein product [Oikopleura dioica]
Length = 927
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 167/367 (45%), Gaps = 57/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ +Q+L S +P V+ L + DI K + G V++
Sbjct: 586 GLKNLGNTCYMNSIIQSLGSLAPLVEKFLTDKYRADINKKNF---LGHKGLVAE------ 636
Query: 77 GSSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
+ +V+ G + F P MF+ L + P I G +Q+DAQE L F++
Sbjct: 637 ------HFAVVAKGLWHGGFKNFQPRMFKEALASCNP-----IFGNYKQQDAQELLIFLL 685
Query: 131 DQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
D +H++L K++ E +G LV+ ++ WE NKS +
Sbjct: 686 DGLHEDLNKVKDRRYIEEKDADGRPDQLVA---DESWENHTRLNKSIIV----------- 731
Query: 187 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RT 244
D+F GQ K+ +K K S F+ L L I + T+E L LF E L G R
Sbjct: 732 DLFQGQFKATIKCLSCKFTSVKFDAFMFLSLPIPTSGKATLESCLNLFQQTEKLTGDDRW 791
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVT 304
+ A++++++ + +LI+HL RF + +K+ ++ +P G DL
Sbjct: 792 TCPKCKRARDAERTLRLWRMPTLLIIHLKRFKSDGRWKSKVSTNISYP---TTGFDL--K 846
Query: 305 PSAEGRK----YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 360
P G+K Y L+A H G GHY A R W+ DDA VTAI SK +
Sbjct: 847 PQTLGKKKQPPYNLIAVTHHIGASTDSGHYVASCRRAKG-WVKADDAEVTAISESKAISP 905
Query: 361 QAYVLFY 367
AY+LFY
Sbjct: 906 TAYILFY 912
>gi|325186573|emb|CCA21120.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 565
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 187/414 (45%), Gaps = 76/414 (18%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-----AGYPTLTAF---VGFV 68
RGL+N GN CF N +Q+LM+CSPF+ L + +R + + T A+ V F
Sbjct: 117 RGLVNQGNTCFQNVIMQSLMACSPFLNLFISI-SRQVASNKELLSSSNTFRAWKYMVAFT 175
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQEFLS 127
+F+ PS + + S LD S ++ ++ + +V +++ R +EDA EFL
Sbjct: 176 REFEEPSLMQLRAIS-SYLDNDERTSKAI---RIRGYFMEVLSALQKSRGDEEDALEFLE 231
Query: 128 FIMDQMHDEL----LKLQGEST---SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
F +D +H E L+L T + + ++ +D W +G K K++ R SF
Sbjct: 232 FFLDYLHSEYVTSGLRLPAVCTRNVGMQAKENEVSTIESDDGWAEIGKKGKTSTIRQTSF 291
Query: 181 LPSA--LSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI------------------- 218
S ++ +F G L+S ++ G K S ++ F LHL++
Sbjct: 292 DSSVSPINWLFRGSLRSELQQAGKKQNSINIEAFHCLHLNLDHQEGAQMAIPGNQHGVGP 351
Query: 219 ---YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRF 275
E+V E L FS E + + G+ K+ ++++L +L L++ RF
Sbjct: 352 GASKKESVKLEEMILETFS-----EEFLDDDSNPGGM---KRLTRMESLPIVLTLNIKRF 403
Query: 276 SYGSQ-GSTKLHKSVRFPLQL-----VLGRDLLVTPSAEGRK----------------YE 313
+Y + G KL + V++P + ++ + A R YE
Sbjct: 404 TYDPKLGPVKLQQFVKYPAKFEFPLHLMSKACRAEHVASIRGAIDQSTSDYGSIAPPVYE 463
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A VTHHG+ + GHYT R DQW H+DD V+ + + L + AY+LFY
Sbjct: 464 LCAVVTHHGKYVAGGHYTCVCRDNKDQWFHYDDERVSLVTEACALQENAYLLFY 517
>gi|392299855|gb|EIW10947.1| Ubp3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 912
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 197/461 (42%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETVGPKNKSAVT------RTQSFL 181
G++ I A+ L L EE+ W V +K RT +
Sbjct: 634 SRYGKAEFIKNASPGLKELIEKYGVINDDSTEENGWHEVSGSSKKGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS---------------TK 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 P--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>gi|254578874|ref|XP_002495423.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
gi|238938313|emb|CAR26490.1| ZYRO0B11044p [Zygosaccharomyces rouxii]
Length = 826
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 189/461 (40%), Gaps = 108/461 (23%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 66
VK + PRG++N N+CF+++ LQ L+ C PF+ +L + R++ P L A +
Sbjct: 373 VKSVAPRGIVNRANVCFMSSVLQVLLYCRPFINILNVVSVRNVVARAGPIQSKLLDACLN 432
Query: 67 FVSDFDTPS----------GGSSKKKNIS---------VLDIGRPFSPSMFEAVLKNFTP 107
FD + GS N+ V I P F L P
Sbjct: 433 IYKQFDKDTVELEKKNAAKNGSGNNSNVGSGSIRQSNVVSSISEAIKPDEFYEALSTI-P 491
Query: 108 DVPNSISGRPRQEDAQEFLSFIMDQMHDE----------------LLKLQGESTSI---- 147
+ G QEDA+EFL+ ++DQ+H+E L + E I
Sbjct: 492 KFKDLKWGH--QEDAEEFLTHLLDQLHEEFISSICSLGDNEILNLLQSINDEELRIFFVR 549
Query: 148 --------------NGANTALVSL---------AEEDEWETVGPKNKSAVT------RTQ 178
G L+S E D W V +K RT
Sbjct: 550 NLPRYKKAEFLKSSPGQLKDLISTYGTVSEDNDEEGDGWHEVSGSSKKGKKTKTAAKRTV 609
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
PS +S +FGGQ +SV+ NK S T+ PF + LDI ++V+ +E A + FS
Sbjct: 610 EMEPSPMSCLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDKSVNDLETAFKKFSEY 669
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST------------- 283
E L +++SS + V AKK I L ++L++ L RF + +
Sbjct: 670 E-LLPFKSSSGYD---VEAKKQTFIDRLPQVLLIQLKRFQFINNTDKDNSMVNYNAYNGR 725
Query: 284 --KLHKSVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYF- 337
K+ K + + +L++ + + + +A E R+Y L + HHG GHYTAD +
Sbjct: 726 IEKIRKKINYEHELIIPIESISSANAYKDENRRYHLTGVIYHHGVSSDGGHYTADVYHRE 785
Query: 338 NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQV 370
+D+W DD S+ + VL AY+L Y+++
Sbjct: 786 SDKWYRIDDVSIIELEKEDVLKGGEESGDSRTAYILMYQKI 826
>gi|358341643|dbj|GAA49264.1| ubiquitin carboxyl-terminal hydrolase 2 [Clonorchis sinensis]
Length = 655
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 167/362 (46%), Gaps = 36/362 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGY---PTLTAFVGFVSDFDT 73
GL N GN CF+N+ +Q L + P ++ + E D+ K+ TA+ +++
Sbjct: 320 GLNNLGNTCFMNSIIQCLSNTHPLLEYCISERYVNDLNKSSTMRGNLFTAYASLMNELWD 379
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P S SP F+ ++ F P Q+D+QEFL ++++ +
Sbjct: 380 PEMFESST------------SPMQFKTQIQRFAPRFVGY-----SQQDSQEFLRYVLEGL 422
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + A LA+ D+ + R S SA+ D+F GQL
Sbjct: 423 HNEVNRVTKRPHPVTPDYAAEDKLADRDKADLYW-------KRYLSMDNSAIVDLFVGQL 475
Query: 194 KSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
S ++ A+ S T PF L L I +A I D LRLF++ E+L+G+ G V
Sbjct: 476 MSTLECAECGFKSTTFDPFWDLSLPIPKKANVNIMDCLRLFTSKEDLDGHERPMCGRCKV 535
Query: 253 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 310
K +Q +IL+LHL RFS G + +K+ V +PL L +PS + R
Sbjct: 536 RRRCTKHFSLQKFPRILVLHLKRFS-GERFRSKMSVLVDYPLN-DLNLSEFASPSCQQRY 593
Query: 311 -KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
+Y L A H G GHYTA R+ + + W ++D+ V T V+ + YVLFY+
Sbjct: 594 ARYNLYAVSNHSG-SVYAGHYTAICRHHYRNSWYDYNDSRVRPTSTQSVVSAEGYVLFYE 652
Query: 369 QV 370
+
Sbjct: 653 LI 654
>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
magnipapillata]
Length = 995
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 165/363 (45%), Gaps = 41/363 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++N+ +Q L +C+ +P Y T + ++ +T +
Sbjct: 656 GLKNLGNTCYMNSVIQCL-ACT-------------LPLGKYFTTGMYEKHLNLCNTNAHP 701
Query: 78 SSKKKNISVLDI------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ ++ L I R SP F+ L F PD SG +Q+DA E L F MD
Sbjct: 702 GELARELAFLIIVISAGEYRSVSPIDFKIALGKFAPD----FSGF-KQQDAHELLMFFMD 756
Query: 132 QMHDELLKL-QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
+H+++ K+ + E + + +A + W+ N S + D+F
Sbjct: 757 GLHEDVNKIVKKEIIKVKETDNLSDEIAADIAWKDYKLNNDSVIV-----------DLFQ 805
Query: 191 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
GQ +S V NK S T F L L + S T+E+ ++ F+ E + G + N
Sbjct: 806 GQFRSTVTCLSCNKRSKTFDAFNCLQLPLPSNQSTTLENCIQTFTKAEKIGGNDSWKCSN 865
Query: 250 AGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
A K+++I L +LI+ L RF + + K+ +V FP+Q +V P +
Sbjct: 866 CKRYREASKTIEIWKLPPVLIIQLKRFHFDGRWHNKIQTTVNFPMQNFNMSKYIVAPQSI 925
Query: 309 GRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L A + H+G S GHYTA+ + ++W +FDD+ V I + + + AY+LFY
Sbjct: 926 HTKYHLYAVINHYGSFES-GHYTANCVNPYYEKWYNFDDSIVKEIDVNSIKTNTAYLLFY 984
Query: 368 KQV 370
V
Sbjct: 985 TAV 987
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 131 bits (329), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 180/389 (46%), Gaps = 63/389 (16%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQG 281
++ D LR F+ E L+ T +KS K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELD--ETELYMCHKCRKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYL 420
Query: 282 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFN 338
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A++
Sbjct: 421 RNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYAKH-E 479
Query: 339 DQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+W HF+D++VT V+ +AY+LFY
Sbjct: 480 GRWFHFNDSTVTLADEDTVVKAKAYILFY 508
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ P NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSPSNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|255719840|ref|XP_002556200.1| KLTH0H07370p [Lachancea thermotolerans]
gi|238942166|emb|CAR30338.1| KLTH0H07370p [Lachancea thermotolerans CBS 6340]
Length = 781
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 198/452 (43%), Gaps = 101/452 (22%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK---AGYPTLTAFVG 66
+++ ++PRG++N+GN+CF+++ LQ L+ C PFV L+ + + K G+ L A +
Sbjct: 340 ALQSVIPRGIVNTGNICFMSSILQVLLFCEPFVNLMNLISVKTSAKMGSTGFLLLDACLE 399
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR-------- 118
FD + +++ S G S ++ +A+ + D ++S P+
Sbjct: 400 LYRKFDK---QAFEREKASRSSSGVNISSALADAIKPD---DFYKTLSKLPKFKDLRWGH 453
Query: 119 QEDAQEFLSFIMDQMHDELLK----------------LQGESTS---------------I 147
QEDA+EFL+ ++DQ+H+E + + E T I
Sbjct: 454 QEDAEEFLTHLLDQLHEEFVNSIDSLSDSEVISLINSINDEDTKTVFIRNLAKYKDAKFI 513
Query: 148 NGANTALVSLAEE-------------DEWETVGPKNKSAVT------RTQSFLPSALSDI 188
++ + S+ E+ + W+ V +K RT PS +S I
Sbjct: 514 KDSSNEIKSMLEKYDADVDDADDTSGNGWQEVSSTSKKGKKTKTAAKRTVVVEPSPISVI 573
Query: 189 FGGQLKSVVKAQGNKA--SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
FGGQ +SV+ NK S T+ PF + LDI V+ ++ A FS E+L ++TSS
Sbjct: 574 FGGQFRSVLDVPQNKEPQSITLDPFQTIQLDISDPDVNDLDSAFLKFSEMEHLP-FKTSS 632
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSY--------------GSQGSTKLHKSVRFP 292
N V AKK I L ++ ++ L RFS+ S K+ K + +
Sbjct: 633 GNN---VEAKKQTFIDKLPEVFLIQLKRFSFINNTDKSKIVNYNAYSGHVEKIRKKIHYG 689
Query: 293 LQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDD 346
+L + + + + G Y+L+ V HHG PS GHYT D ++W DD
Sbjct: 690 HELAIPDATISSVHSSFYKEAGTNYKLIGVVYHHGVSPSGGHYTCDVYQETLNKWYRIDD 749
Query: 347 ASVTAIGTSKVLHD--------QAYVLFYKQV 370
+V I +VL AY+L Y+++
Sbjct: 750 TNVQEIEKDEVLKGGEEGNDSRTAYILIYQKL 781
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 175/388 (45%), Gaps = 61/388 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSK-------KKNISVLDIGRP--FSP-SMFEAVLKNFTPDVPNSISGR 116
+ T S G + +K + L G P FSP S+F V K +PN G
Sbjct: 206 ----YHTRSQGDNNVSLVEEFRKTLCALWQGSPTAFSPESLFYVVWK----IMPN-FRGY 256
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 -QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCING 305
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AV 223
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 306 AST----VVTAIFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPV 361
Query: 224 HTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 282
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 362 CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR 421
Query: 283 TKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFND 339
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A +
Sbjct: 422 NKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAFATH-EG 480
Query: 340 QWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+W HF+D++VT VL +AY+LFY
Sbjct: 481 RWFHFNDSTVTLTDEETVLKAKAYILFY 508
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 169/360 (46%), Gaps = 36/360 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+++QAL + P + +L ++I L++ V F
Sbjct: 50 GLTNLGNTCFLNSSIQALSNTQPLTDYFMSQLHVKEINPDN--PLSSQGNIVQSFAQLIR 107
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+K + L+ + P+ F + + N+ P I QEDA EF++F++D +H++
Sbjct: 108 LLWQKVDQYTLEEIQALKPTQFISTIGNYNP-----IFAEGTQEDAHEFIAFLLDMIHED 162
Query: 137 LLKLQGESTSINGANTALVSLAEED----EWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
L +++ + T L D EW +N+S + D+F G
Sbjct: 163 LNRIKKKPYV---EQTKFTKLPTNDDAHQEWTKYLSRNQSIIV-----------DLFQGH 208
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTG 248
+ + K+S +PF+ L + + S +E + F E L EG+ + T
Sbjct: 209 MLDTLSCLTCKSSRYCFEPFMYLSVPVLSRECDLLE-CIEEFLKTETLTGDEGW--NCTK 265
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ + K + + ++ ILI+HL RF + SQ K+ VR+PLQ + +L+ T E
Sbjct: 266 CSQRRDSNKKIDLWSMPNILIIHLKRFKFNSQFRAKIRSLVRYPLQNLSFENLVCTKQIE 325
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y+L A + H G S GHYTA A+ +D QW H++D+ V+ + + D AY+LFY
Sbjct: 326 KPTYDLYAVINHSGTLTS-GHYTAYAKNRDDLQWYHYNDSLVSPVSQPENQSD-AYLLFY 383
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 122 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 175
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + +++ L E T+ NK +
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQEN---ATLSASNKCCINGA 276
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 277 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENGPMC 332
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
T+ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 333 TLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 451
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 452 WFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|351694798|gb|EHA97716.1| Ubiquitin carboxyl-terminal hydrolase 10 [Heterocephalus glaber]
Length = 668
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 143/302 (47%), Gaps = 47/302 (15%)
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
PS + K + + G F P+ +L + +S+S + RQEDA+E+L I++ +
Sbjct: 406 PSCQALGDKIMRAIHPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEYLDLILNGL 461
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+L L+ S N E+EWE VGP+NK +VT F+ ++ IFGG +
Sbjct: 462 HEEMLSLK-RSPLTNNEEQQEQGEGHEEEWEQVGPRNKMSVTHQADFIQIPITSIFGGHI 520
Query: 194 KSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV 253
+SVV Q +K SAT+QPF +L LDI S+ + T+EDAL A E+++GY T + V
Sbjct: 521 RSVVYQQSSKESATLQPFFMLQLDIKSDKICTMEDALESLVARESVQGYTTKTKQE---V 577
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
+ V ++ L + +LHL F Y
Sbjct: 578 EISRRVTLEKLPPVFVLHLKCF----------------------------------MTYR 603
Query: 314 LVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYK 368
L+A V HH + GHYT + + WL ++ V I KVL Y+L+Y+
Sbjct: 604 LIAVVYHHCNSATGGHYTTNVFQIGLNSWLCINNQMVKVIQQYKVLKPTDERTTYLLYYR 663
Query: 369 QV 370
++
Sbjct: 664 RM 665
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLFASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVVKAKAYILFY 508
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 262
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 122 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 175
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 176 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 226
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 227 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 276
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 277 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 332
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 333 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 392
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 393 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 451
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 452 WFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 178/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 67 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 121 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 171
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ T+ NK +
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA 221
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 277
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEPENSGLESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 396
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 397 WFHFNDSTVTLTDEETVVKAKAYILFY 423
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 262
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 124 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 177
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 178 ----YHTRSQG---ENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 228
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + S+ +E+ T+ NK +
Sbjct: 229 QQQDAHEFMRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGA 278
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+
Sbjct: 279 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTC 334
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 335 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 394
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 395 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 453
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT VL +AY+LFY
Sbjct: 454 WFHFNDSTVTLTDEDTVLKAKAYILFY 480
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 123 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 176
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 177 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 227
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 228 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 277
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 278 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 333
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 334 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 393
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 394 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 452
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 453 WFHFNDSTVTLTDEETVVKAKAYILFY 479
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 284
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 284
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKS-VKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L+ IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHRCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 63 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + E T+ NK +
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAIL----QENSTLSASNKCCINGA 217
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 392
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 393 WFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 284
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 284
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 63 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 116
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 117 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 167
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + E T+ NK +
Sbjct: 168 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAIL----QENSTLSASNKCCINGA 217
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 218 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 273
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 274 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 333
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 334 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 392
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 393 WFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 262
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 318
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEDTVVKAKAYILFY 464
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 99 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 152
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G N+S+++ R ++++ F+P+ +PN G
Sbjct: 153 ----YHTRSQGDV---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY- 203
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 204 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SASNKCCINGA 253
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 254 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 309
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 310 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 369
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 370 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-KGR 428
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 429 WFHFNDSTVTLTEEETVAKAKAYILFY 455
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 175/379 (46%), Gaps = 59/379 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 74
GL N GN CF+NA LQ+L + F +EL R+ AG T + T
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 209
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 125
S G S N+S+++ R ++++ F+P+ +PN G +Q+DA EF
Sbjct: 210 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 264
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
+ +++D +H L+LQG NG + + S+ +E+ T+ NK + + +
Sbjct: 265 MRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGAST----VV 310
Query: 186 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 232
+ IFGG L++ V S PFL L LDI S+ ++ D LR
Sbjct: 311 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 370
Query: 233 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
F+ E L E + K IQ L K+L LHL RF + + K+ V F
Sbjct: 371 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 430
Query: 292 PLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 348
PL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++
Sbjct: 431 PLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDST 489
Query: 349 VTAIGTSKVLHDQAYVLFY 367
VT V+ +AY+LFY
Sbjct: 490 VTLTDEDTVVKAKAYILFY 508
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 177/389 (45%), Gaps = 59/389 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 81 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 134
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 135 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 185
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 186 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSCSPI-LQENS---TLSASNKCCINGA 235
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 236 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 291
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 292 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 351
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 352 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 410
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
W HF+D++VT V+ +AY+LFY +
Sbjct: 411 WFHFNDSTVTLTEEDTVVKAKAYILFYAE 439
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 175/379 (46%), Gaps = 59/379 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTP 74
GL N GN CF+NA LQ+L + F +EL R+ AG T + T
Sbjct: 116 GLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTR 165
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEF 125
S G S N+S+++ R ++++ F+P+ +PN G +Q+DA EF
Sbjct: 166 SQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEF 220
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
+ +++D +H L+LQG NG + + S+ +E+ T+ NK + + +
Sbjct: 221 MRYLLDHLH---LELQG---GFNGISRS--SILQENS--TLSASNKCCINGAST----VV 266
Query: 186 SDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRL 232
+ IFGG L++ V S PFL L LDI S+ ++ D LR
Sbjct: 267 TAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCSLRDCLRS 326
Query: 233 FSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
F+ E L E + K IQ L K+L LHL RF + + K+ V F
Sbjct: 327 FTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEF 386
Query: 292 PLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 348
PL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++
Sbjct: 387 PLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDST 445
Query: 349 VTAIGTSKVLHDQAYVLFY 367
VT V+ +AY+LFY
Sbjct: 446 VTLTDEDTVVKAKAYILFY 464
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + +++ L E ++ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 307 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 207
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G N+S+++ R ++++ F+P+ +PN G
Sbjct: 208 ----YHTRSQGDV---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY- 258
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SACNKCCINGA 308
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-KGR 483
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 484 WFHFNDSTVTLTEEETVAKAKAYILFY 510
>gi|123479953|ref|XP_001323132.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121905991|gb|EAY10909.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 393
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 158/370 (42%), Gaps = 54/370 (14%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT-----RDIPKAGYPTLTAFVGFVSD 70
PRGL+N G +CF NA++Q L + PFV ++T D + P+ TA F+++
Sbjct: 60 PRGLMNRGLMCFANASIQLLFASPPFVSFANFMKTYYPLFSDKQREVIPSWTALYKFLNN 119
Query: 71 FDTPSGGSSKK-----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F SS K++ ++D + + V F N+ QEDA EF
Sbjct: 120 FKFSDSASSDGVYTSLKSLDLIDKASATNTDILNEVFGPF-----NAKRKPKTQEDASEF 174
Query: 126 LSFIMDQMHDELLKL-----QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
LS+ ++++HDEL L ES+ N T +G K + V TQ
Sbjct: 175 LSYFLNKLHDELCSLIELYPVPESSDPNNRRTV------------IGGKIQQIVD-TQGK 221
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
L S LS IF ++S S + L+L L IY + ++ A+R + E +
Sbjct: 222 L-SPLSKIFATFVRSETLDHHKVRSVNAEVTLVLQLPIYE--IKSLGQAIRRYLEVEQIT 278
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 300
T K + L LI+ RF + G KL V +P L L D
Sbjct: 279 D------------TISKRNHLTALPMSLIIGFTRFGFNDYGPMKLTGIVEYPEILRLEAD 326
Query: 301 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 360
E Y+L A V H G P GHY AR F+ QWL FDD V+ +G L
Sbjct: 327 ------DEKFSYQLSAVVEHIGTRPDAGHYVCYARRFDGQWLKFDDDKVSELGDEGHLGL 380
Query: 361 QAYVLFYKQV 370
QAY+L Y ++
Sbjct: 381 QAYMLLYNRI 390
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGFLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDIYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 176/383 (45%), Gaps = 59/383 (15%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSD 70
L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 276 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT---------- 325
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQED 121
+ T S G + N+S+++ R ++++ F+P+ +PN G +Q+D
Sbjct: 326 YHTRSQGDN---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY-QQQD 380
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EF+ +++D +H L+LQG NG + +++ L E ++ NK + + +
Sbjct: 381 AHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGASTVV 430
Query: 182 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 228
+ IFGG L++ V S PFL L LDI S+ + T+ D
Sbjct: 431 TA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQESGPMCTLRD 486
Query: 229 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 487 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 546
Query: 288 SVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHF 344
V FPL+ + + L+ P G + Y+LVA V HHG GHYTA A + +W HF
Sbjct: 547 YVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVHHGSGVGSGHYTAYAAH-EGRWFHF 605
Query: 345 DDASVTAIGTSKVLHDQAYVLFY 367
+D++VT V +AY+LFY
Sbjct: 606 NDSTVTLTDEETVGKAKAYILFY 628
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 67 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 120
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 121 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 171
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + S+ +E+ T+ NK +
Sbjct: 172 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 221
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 222 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 277
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 278 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 337
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 338 KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 396
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 397 WFHFNDSTVTVTDEETVGKAKAYILFY 423
>gi|156847299|ref|XP_001646534.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156117212|gb|EDO18676.1| hypothetical protein Kpol_1055p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 822
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 195/461 (42%), Gaps = 102/461 (22%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPT 60
NE + + ++PRG++N N+CF+++ LQ L+ C PF+ +L TR+ +
Sbjct: 365 NESILPIGSIIPRGIVNRANICFMSSVLQVLLYCRPFISVLNIASTRNSYSKVNSNSSKL 424
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP--------DVPNS 112
L A V FD + K+ + + ++ E + NF P D
Sbjct: 425 LDACVTIYKQFDKQTYQKEKENDKNKDKKSN--GKAVEEKPMNNFAPASDAINPDDFYKI 482
Query: 113 ISGRPR--------QEDAQEFLSFIMDQMHDEL--------------------------- 137
+S P+ QEDA+EFL+ ++DQ+H+E
Sbjct: 483 LSTLPKFKDLQWGHQEDAEEFLTHLLDQLHEEFICSINSLTDNEILNIVQSISDEELKVF 542
Query: 138 ----LKLQGESTSINGANTALVSL------AEEDEWETVG-----------PKNKSAVTR 176
L ++ + A+ L SL +D+ ET G K K+A R
Sbjct: 543 FVRNLPQYKKADFMKNASYQLKSLISKYGPMSDDDDETNGWHEVSSTSKKGKKTKTAAKR 602
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFS 234
T S +S++FGGQ +SV+ NK S T+ PF + LDI ++ +E A + FS
Sbjct: 603 TVEIEQSPISNLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDSSIDDLETAFKKFS 662
Query: 235 APENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST----------- 283
E L +++SS + V AKK I L ++L++ L RFS+ +
Sbjct: 663 EYE-LLPFKSSSGSD---VEAKKQTFIDKLPQVLLVQLKRFSFINNTDKDNNMTNYNAYN 718
Query: 284 ----KLHKSVRFPLQLVLGRDLLVTPS--AEGRKYELVATVTHHGRDPSKGHYTADARYF 337
K+ K +++ +L + + L S + R YEL + HHG GHYTAD +
Sbjct: 719 GRIEKIRKKIKYDHELTIPLESLSPASIDTKNRAYELTGVIYHHGLSSDGGHYTADVYHK 778
Query: 338 N-DQWLHFDDASVTAIGTSKVLH--------DQAYVLFYKQ 369
D+W DD ++ + VL AY+L Y++
Sbjct: 779 ELDKWYRIDDVNIIELEKDDVLKGGEDGNDTRTAYILIYRK 819
>gi|326433796|gb|EGD79366.1| hypothetical protein PTSG_09776 [Salpingoeca sp. ATCC 50818]
Length = 612
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 178/377 (47%), Gaps = 43/377 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTPSG 76
G++N GN C++NA LQ L S P V+ + L +P + TLT A F+ +F + S
Sbjct: 240 GILNEGNTCYMNAPLQLLFSL-PHVRRV--LLGASVPPS---TLTYALQSFLREFISTSR 293
Query: 77 GS--SKKKNIS-VLDIGRPFSPSMFEAVLKNFTP---DVPNSISGRPRQEDAQEFLSFIM 130
++++ +L + +P S + A + + P D N Q DA+E L+F++
Sbjct: 294 LDVLDPRQDVDRILRVAKPLSAAAVYAGIGSRNPSLFDFSN------MQHDAEEVLTFLL 347
Query: 131 DQMHDELLK--------LQGESTSINGANTALVSLAEEDE------WETVGPKNKSAVTR 176
+HDELLK GE + GA A + A+ + WE VGPK SA
Sbjct: 348 STVHDELLKHCPTFTGLAPGERDASGGARNADDADADAGDDAGDDGWEEVGPKKTSARLN 407
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
SA+S + G +S + + + S +QPF +L +DI E +E+A+ +P
Sbjct: 408 EVKAKLSAVSRVLQGTFRSTIAYKSGQRSIVLQPFFVLQVDIKPE-TKRLEEAIDATFSP 466
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
E +EG + S G VTA+K + ++ +L++ L R+ + Q TKL V F L
Sbjct: 467 ETIEGVQRS--GAPAAVTARKQLHLERAPPVLLIQLKRYHFDGQQITKLTNHVDFTETLT 524
Query: 297 LGRDLL-VTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L + L V AE +Y L V H G +GHYT R + WL F+D + I
Sbjct: 525 LKQSWLSVKAQAEQECEYHLHGVVFHIGSLAVQGHYTCSVRS-SCGWLDFNDKKIKRIDP 583
Query: 355 SKVL----HDQAYVLFY 367
V +QAY+L Y
Sbjct: 584 MFVYRPAEREQAYMLAY 600
>gi|347441714|emb|CCD34635.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 617
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 133/255 (52%), Gaps = 33/255 (12%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP--KAGYPTLTAFVGFVSDF 71
L PRGL+N+GN+C++N+ LQ L+ C+PF L ++ + K+ P + A + F+ +F
Sbjct: 357 LEPRGLVNTGNMCYMNSVLQVLVFCTPFYDFLDQVSKKAAHSFKSQTPLIDAMIMFMREF 416
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-PR--------QEDA 122
S ++ L G E +FTPD + R PR Q+DA
Sbjct: 417 SVIDSAKSVEQLKMRLKDGE------LEQYGDSFTPDFVYDVMRRLPRFVTMQRGHQQDA 470
Query: 123 QEFLSFIMDQMHDELLK-LQGESTSINGANTALVSLAE-------------EDEWETVGP 168
+EFL F+++ +HDE + ++ +S N A+T +++ +D W+ VGP
Sbjct: 471 EEFLGFLLEGLHDECVHVMKSSESSKNSADTTPMNVPSSPISDTASRRGSVDDVWQQVGP 530
Query: 169 KNKSAVTRTQSFL--PSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTI 226
K K+A+TR+ + S ++ IFGG L+S ++ G K S T++P+ L LDI S +H I
Sbjct: 531 KQKAAITRSSGTILTGSPVTKIFGGSLRSELRVPGLKDSITLEPYQPLQLDIGSPDIHNI 590
Query: 227 EDALRLFSAPENLEG 241
DALR + E L G
Sbjct: 591 VDALRGLTHSEVLHG 605
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 134 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 187
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 188 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 238
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + S+ +E+ T+ NK +
Sbjct: 239 QQQDAHEFMRYLLDHLH---LELQG---GFNGVPRS--SILQEN--STLSANNKCCINGA 288
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 289 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQESGPVC 344
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 345 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 404
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 405 KVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 463
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 464 WFHFNDSTVTVTDEETVGKAKAYILFY 490
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 154 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 207
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G N+S+++ R ++++ F+P+ +PN G
Sbjct: 208 ----YHTRSQGDV---NVSLVEEFRKTLCALWQGNQTAFSPESLFYVVWKIMPN-FRGY- 258
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQGE +G++ +++S A NK +
Sbjct: 259 QQQDAHEFMRYLLDHLH---LELQGE---FDGSSHSVLSQANCSR----SVSNKCCINGA 308
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + S +FGG L++ V S PFL L LDI S+
Sbjct: 309 STVVTS----VFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRCKNQENGPTC 364
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
T+ D LR F+ E L E + + K IQ L K+L LHL RF + +
Sbjct: 365 TLRDCLRSFTDLEELDETELYTCLKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 424
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 425 KVDTYVDFPLRGLDMKSFLLEPENIGPESCLYDLEAVVVHHGSGVGSGHYTAYATH-EGR 483
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 484 WFHFNDSTVTLTEEETVAKAKAYILFY 510
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 175/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 213 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 262
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHY A A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYIAYATH-EGR 437
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 173/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
RQ+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 RQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSANNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 S----TVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V+FPL+ + + L+ P G Y+L A HHG GHYTA A + +
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVFVHHGSGVGSGHYTAYAVH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 104 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 157
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 158 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 208
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + E + NK +
Sbjct: 209 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAIL----QENSALSASNKCCINGA 258
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 259 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 314
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 315 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 374
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 375 KVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 433
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 434 WFHFNDSTVTLTDEDTVVKAKAYILFY 460
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 177/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 135 STTGICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 188
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 189 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 239
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + ++ +E+ + NK +
Sbjct: 240 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRS--AILQENS--ALSGSNKCCINGA 289
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 290 ----STVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPVC 345
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 346 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 405
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 406 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 464
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 465 WFHFNDSTVTLTDEDTVVKAKAYILFY 491
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 108 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 161
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 162 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 212
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H EL NG + + + L E T+ NK + +
Sbjct: 213 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHSAI-LQENS---TLSTSNKCCINGS 262
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 263 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 318
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 319 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 378
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 379 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 437
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 438 WFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 117/390 (30%), Positives = 177/390 (45%), Gaps = 65/390 (16%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + +++ L E N S +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQE----------NSSLTASS 299
Query: 178 QSFLPSA---LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------ 221
+ + A ++ IFGG L++ V S PFL L LDI S+
Sbjct: 300 KCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRTKNQENG 359
Query: 222 AVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 280
+ T+ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 360 PMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAY 419
Query: 281 GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYF 337
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A +
Sbjct: 420 LRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAAH- 478
Query: 338 NDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+W HF+D++VT V+ +AY+LFY
Sbjct: 479 EGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 175/382 (45%), Gaps = 61/382 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 74
GL N GN CF+NA LQ+L + F +EL P++ G + + T
Sbjct: 164 GLRNLGNTCFMNAILQSLSNIQVFSCYFKEL----------PSVALRSGKTAGRRMYHTR 213
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 126
S G S ++S+++ R S+++ F+PD + S G +Q+DA EFL
Sbjct: 214 SQGDS---SVSLVEEFRKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGY-QQQDAHEFL 269
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+++D +H E+ QG NG+ + V+ E + ++K + T + + S
Sbjct: 270 RYLLDHLHREM---QGNK---NGSPSPPVTSDEPNH----ASESKCFINGTSTIVTS--- 316
Query: 187 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 233
+FGG L++ V S PFL L LDI ++ T+ D LR F
Sbjct: 317 -VFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSDCLRSF 375
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
+ E L+ T +KS K IQ L K+L LHL RF + + K+ V
Sbjct: 376 TDLEELD--ETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVE 433
Query: 291 FPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA 347
FP+ + + L+ P E Y+L A V HHG GHYTA R+ QW HF+D+
Sbjct: 434 FPMCGLDMKSYLLEPENSLPERCLYDLAAVVVHHGSGIGSGHYTAYGRH-EGQWYHFNDS 492
Query: 348 SVTAIGTSKVLHDQAYVLFYKQ 369
+VT + VL +AY+LFY +
Sbjct: 493 TVTLVSEEAVLKAKAYILFYTE 514
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 114/387 (29%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H EL NG + + + L E T+ NK + +
Sbjct: 257 QQQDAHEFMRYLLDHLHLEL------QDGFNGVSHSAI-LQENS---TLSTSNKCCINGS 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 126 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRT------ 179
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 180 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 230
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + +++ L E + NK +
Sbjct: 231 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---GLSASNKCCINGA 280
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ +
Sbjct: 281 S----TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPMC 336
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 337 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 396
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 397 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 455
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 456 WFHFNDSTVTLTDEETVVKAKAYILFY 482
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 130 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 183
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 184 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 234
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E + NK +
Sbjct: 235 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSTI-LQENS---ALSASNKCCINGA 284
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 285 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 340
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 341 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 400
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G Y+L A V HHG GHYTA A + +
Sbjct: 401 KVDTYVEFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 459
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 460 WFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V+FPL+ + + L+ P G Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|40555741|gb|AAH64516.1| USP10 protein, partial [Homo sapiens]
Length = 194
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 109/195 (55%), Gaps = 16/195 (8%)
Query: 188 IFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T +
Sbjct: 1 IFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTK 60
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
V + V ++ L +L+LHL RF Y + G KL K++ +P+ L + ++LL +P
Sbjct: 61 QE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPG 116
Query: 307 AEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL- 358
+ R Y L A V HHG + GHYT D + WL DD +V I +V+
Sbjct: 117 VKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVK 176
Query: 359 ---HDQAYVLFYKQV 370
AY+L+Y++V
Sbjct: 177 PTAERTAYLLYYRRV 191
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 174/388 (44%), Gaps = 61/388 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSK-------KKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGR 116
+ T S G S +K + L G FSP S+F V K +PN G
Sbjct: 206 ----YHTRSQGDSSVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWK----IMPN-FRGY 256
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
+Q+DA EF+ +++D +H L+LQG ++G TA++ E ++ NK +
Sbjct: 257 -QQQDAHEFMRYLLDHLH---LELQGGFNGVSG--TAIL-----QENSSLAASNKCCING 305
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AV 223
+ ++ +FGG L++ V S PFL L LDI S+ V
Sbjct: 306 AS----TVVTAVFGGVLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPV 361
Query: 224 HTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 282
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 362 CSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLR 421
Query: 283 TKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFND 339
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A +
Sbjct: 422 NKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVH-EG 480
Query: 340 QWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+W HF+D++VT V +AY+LFY
Sbjct: 481 RWFHFNDSTVTLTDEDTVGKAKAYILFY 508
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 173/384 (45%), Gaps = 53/384 (13%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 69
S L GL N GN CF+NA LQ+L + F +EL P + G +
Sbjct: 343 STTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKEL----------PAVELRNGKTA 392
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQE 120
T S N+S+++ R ++++ F+P+ +PN G +Q+
Sbjct: 393 GRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQ 450
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
DA EF+ +++D +H L+LQG NG + +++ L E ++ NK +
Sbjct: 451 DAHEFMRYLLDHLH---LELQG---GFNGVSRSVI-LQENS---SLSASNKCCINGAS-- 498
Query: 181 LPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIE 227
+ ++ IFGG L++ V S PFL L LDI S+ + ++
Sbjct: 499 --TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPLCSLR 556
Query: 228 DALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 286
D LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 557 DCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVD 616
Query: 287 KSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLH 343
V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +W H
Sbjct: 617 TYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFH 675
Query: 344 FDDASVTAIGTSKVLHDQAYVLFY 367
F+D++VT V+ +AY+LFY
Sbjct: 676 FNDSTVTLTDEETVVKAKAYILFY 699
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 167/383 (43%), Gaps = 58/383 (15%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAF------ 64
L GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 157 LCATGLRNLGNTCFMNAILQSLSNIQQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNG 216
Query: 65 VGFVSDFDTPSGGSSKKKNISVLDIGR--PFSP-SMFEAVLKNFTPDVPNSISGRPRQED 121
V V +F +K + L G FSP S+F V K +PN G +Q+D
Sbjct: 217 VSLVEEF---------RKTLCALWQGSQAAFSPESLFYVVWK----IMPN-FRGY-QQQD 261
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EF+ +++D +H EL QG NG + + V L E G + +
Sbjct: 262 AHEFMRYLLDHLHREL---QG---GFNGVSRSSVLLQENSGLSAGGRCCINGAS------ 309
Query: 182 PSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIED 228
+ ++ IFGG L++ V S PFL L LDI S+ T+ D
Sbjct: 310 -TVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRNKRSKNQENGPTCTLRD 368
Query: 229 ALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 369 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDT 428
Query: 288 SVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHF 344
V FPL+ + + L+ P E Y+L A V HHG GHYTA A + +W HF
Sbjct: 429 YVEFPLRGLDMKCFLLEPENSRPENCLYDLAAVVVHHGSGVGSGHYTAYAAH-EGRWFHF 487
Query: 345 DDASVTAIGTSKVLHDQAYVLFY 367
+D++VT VL +AY+LFY
Sbjct: 488 NDSTVTLTDEETVLRAKAYILFY 510
>gi|170038530|ref|XP_001847102.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167882245|gb|EDS45628.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1984
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 31/229 (13%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-----GYPTLTAFVGFV 68
+ PRGLIN N C++NA LQAL++C PF L++ +R+ +P A P + A V
Sbjct: 1389 IQPRGLINRSNYCYINAILQALVACPPFYHLMRAIRS--LPAARNSKHPKPFIDAMTALV 1446
Query: 69 SDFDT-P-----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
++F T P + +KK + P P + +L D+ + GR QEDA
Sbjct: 1447 AEFSTLPLRSKVARDKTKKDETPDITTDTPLEPVVIHKILALLRSDI-FQVEGR--QEDA 1503
Query: 123 QEFLSFIMDQMHDELL---KLQGESTSINGANTALVSLAEEDE---------WETV-GPK 169
+EFL ++++++DE+L KL + +NG++ S AEE W+ + G +
Sbjct: 1504 EEFLGCVLNRLNDEMLELMKLSKNESEVNGSSGN--SSAEESGDGHGDDQDDWKVIRGNR 1561
Query: 170 NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDI 218
NK +TRT F S +SDIFGG+L+S V +G+ + +QPF L LDI
Sbjct: 1562 NKGTITRTTDFGRSPMSDIFGGKLRSRVHREGDHPTDNIQPFFTLQLDI 1610
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 88/155 (56%), Gaps = 11/155 (7%)
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 284
+++DAL L + LEG S T + A + V ++ L ++ILHL F Y G TK
Sbjct: 1758 SVKDALDLLVGKDQLEGMTCSKTKQE--IQAWQQVTLEELPIVMILHLKCFDYKMDGCTK 1815
Query: 285 LHKSVRFPLQLVLGRDLLVTP----SAEGRKYELVATVTHHGRDPSKGHYTADARYFN-D 339
+ K++ FP++L + L+ + +A+ ++Y+L A V H G++ SKGHY D +
Sbjct: 1816 ILKTLEFPIELKIDSKLMSSKGKAYTAKQKQYKLFAVVYHDGKEASKGHYITDVFHAGYG 1875
Query: 340 QWLHFDDASVTAIGTSKVLHDQA----YVLFYKQV 370
W+ +DD++V A+ VLH +A Y+L+Y+++
Sbjct: 1876 TWIRYDDSTVRAVPEFNVLHPKAPRVPYLLYYRRL 1910
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 167/380 (43%), Gaps = 60/380 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 74
GL N GN CF+NA LQ+L + F +EL P ++ G + + T
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTR 210
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 126
S G S ++S+++ R S+++ F+PD + S G +Q+DA EF+
Sbjct: 211 SQGDS---SVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFM 266
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+++D +H EL G N A + + +D K + T S + S
Sbjct: 267 RYLLDHLHRELQY---------GRNGASHAASPQDGVRLSAADGKCCINGTASVVTS--- 314
Query: 187 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 233
IFGG L++ V S PFL L LDI S+ T+ D LR F
Sbjct: 315 -IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSF 373
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
+ E L+ T +KS K +Q L K+L LHL RF + + K+ V
Sbjct: 374 TDLEELD--ETELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVE 431
Query: 291 FPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA 347
FPL+ + R L+ P E Y+LVA V HHG GHYTA + W HF+D+
Sbjct: 432 FPLKGLDMRGYLLEPENSLPESCVYDLVAVVVHHGSGVGSGHYTAYGSH-EGCWYHFNDS 490
Query: 348 SVTAIGTSKVLHDQAYVLFY 367
+VT V +AY+LFY
Sbjct: 491 TVTLTNEDAVRKAKAYILFY 510
>gi|403334902|gb|EJY66621.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 716
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 167/380 (43%), Gaps = 56/380 (14%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPT--LTAFVGFVS 69
D L +GL N+ N CF+N LQ+L+S F +L + +++ K P L FV ++S
Sbjct: 366 DKLNKGLTNTTNCCFMNVILQSLLSIPAFFNMLVAISDNQEVMKELGPDSLLRKFV-YLS 424
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPS------MFEAVLKNFTPDVPNSISGRPRQEDAQ 123
+ P + +D PF+ + +F + +NF P +D
Sbjct: 425 MYFNP---------MLQMDRKSPFAANPVDAEKIFAELNQNFNP--------HQEHQDCH 467
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAV--TRTQSFL 181
EFL+ ++D +HDEL KL + + DEW+ VG KN Q
Sbjct: 468 EFLAMLLDLLHDEL-KLIYVPPDVKDKEAVV------DEWQEVGNKNSKCKFNNDQQQIS 520
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
S ++DIFGG +++ + + S T +PF L+L++ ++E+ L F + +
Sbjct: 521 QSLINDIFGGIVRNEFQIDRSTNVSVTFEPFFFLNLEV--NRSESLEECLNNFFRSKIIN 578
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 300
Y+ +V A +I+ L ILIL L RF Y G K+ + + FP L + +
Sbjct: 579 DYKLE----GKIVRATHQQQIEKLPNILILQLKRFVY-RDGPVKIGEFIEFPEVLRIEDN 633
Query: 301 LLVT-----------PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
L T GR Y L + H G S+GHY ++ W+ +DD +
Sbjct: 634 CLSTHLKLGTFNKEERDKNGRSYRLTSIGIHKGTQLSRGHYICYVLDASNNWIQYDDNKI 693
Query: 350 TA-IGTSKVLHDQAYVLFYK 368
I T V QAY+LFY+
Sbjct: 694 KKMIDTDTVFDSQAYLLFYE 713
>gi|429240193|ref|NP_595732.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe
972h-]
gi|384872646|sp|O60139.2|UBP4_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 4;
AltName: Full=Deubiquitinating enzyme 4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|347834304|emb|CAA18405.2| ubiquitin C-terminal hydrolase Ubp4 [Schizosaccharomyces pombe]
Length = 593
Score = 122 bits (305), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 171/395 (43%), Gaps = 77/395 (19%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 62
S ++ P GL N GN C++N LQ L +C P +Q LLQ + T++ G +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279
Query: 63 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
AF + G R SP F ++++ D SI G Q DA
Sbjct: 280 AFFSLLQSVLLNHG-------------QRSISPRNFLEIVQSLNRDF--SIDG---QCDA 321
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---------------EWETVG 167
QEFL+F +D++H++L + N + + + L E+ EW
Sbjct: 322 QEFLNFFLDKLHEDL--------NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHL 373
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPF--LLLHLDIYSEAVH 224
NKS V F GQL S + + S T PF L + +D S V
Sbjct: 374 RSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV- 421
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++++ L FSAPE L+G+ V +AKK + I L + LI+ + RF G
Sbjct: 422 SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRK 481
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF 337
K+ + LQ + +LV PS + Y L A + H+G+ GHY +D F
Sbjct: 482 KIDTPLGLSLQ--IPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQ-LENGHYISDV-LF 537
Query: 338 NDQWLHFDDASVTAIGTSKVLHDQ---AYVLFYKQ 369
N++W H DD+ V +G L + +Y+LFYK+
Sbjct: 538 NNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKR 572
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 73
GL N GN CF+N+ LQ L + LQ RD+ + P ++ F + T
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTPLMSEFAKLIQLLWT 106
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
S N SV SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 107 SS------PNDSV-------SPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 148
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 149 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 198
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 199 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 256
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 257 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 315
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 316 NHAVYNLYAVANHSGTT-MGGHYTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLF 374
Query: 367 YK 368
Y+
Sbjct: 375 YE 376
>gi|349603765|gb|AEP99510.1| Ubiquitin carboxyl-terminal hydrolase 8-like protein, partial
[Equus caballus]
Length = 394
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 54 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 107
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 108 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 157
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 158 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 206
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 207 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 266
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 267 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 326
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 327 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 382
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 166/386 (43%), Gaps = 57/386 (14%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTL----- 61
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STAAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQ 211
Query: 62 -TAFVGFVSDFDTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPR 118
V V +F +K + L G FSP V+ P+ +
Sbjct: 212 GDTSVSLVEEF---------RKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGY-----Q 257
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
Q+DA EF+ +++D +H L+LQG NG + + V L E T+ +K V
Sbjct: 258 QQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAV-LQENS---TLSASSKCCVNGAS 307
Query: 179 SFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHT 225
+ + + IFGG L++ V S PFL L LDI S+ V +
Sbjct: 308 TVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCS 363
Query: 226 IEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 284
+ D LR F+ E L E + K IQ L K+L LHL RF + + K
Sbjct: 364 LRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNK 423
Query: 285 LHKSVRFPLQLVLGRDLLVTPSA---EGRKYELVATVTHHGRDPSKGHYTADARYFNDQW 341
+ V FPL+ + + L+ P E Y+L A V HHG GHYTA A + +W
Sbjct: 424 VDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRW 482
Query: 342 LHFDDASVTAIGTSKVLHDQAYVLFY 367
HF+D++VT V +AY+LFY
Sbjct: 483 FHFNDSTVTLTDEETVGKAKAYILFY 508
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 157/364 (43%), Gaps = 45/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDI----PKAGYPTLTAFVGFVSDFD 72
GL N GN CF+N+++Q L +P V++ L RD+ P L G +
Sbjct: 4 GLSNLGNTCFMNSSVQCLAHAAPLVRVFLTGAYKRDLNPDNPLGNKGELAEAFGSLMKLL 63
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
G S SP F+A L F P G Q+D+QE L+F++D
Sbjct: 64 WQGGVGS-------------VSPKGFKAALARFAPQF-----GGYSQQDSQELLAFLLDG 105
Query: 133 MHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+H++L +++ E G +V+ + W+ +N S V D
Sbjct: 106 LHEDLNRVRQKPYVEEADAEGRPDKVVA---AEAWDNYRKRNDSVVV-----------DH 151
Query: 189 FGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL-RLFSAPENLEGYRTSS 246
F G KS +V Q + +S PF+ L L + S T+ L F PE L+ +
Sbjct: 152 FQGLYKSTLVCPQCSFSSVKFDPFMYLSLPLPSSKTRTLYITLIYAFLQPEQLDAADSWY 211
Query: 247 TGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
G V A+K + + +L ++L++HL RFSY KL V FPL + L+
Sbjct: 212 CGRCKEHVRAEKKLDLWSLPELLVVHLKRFSYSRHSRDKLDAPVHFPLSALDLSSFLLRE 271
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
Y+L A H G GHYTA R +D W FDD+ V+ S V AY+L
Sbjct: 272 QDVAPVYDLYAVSNHFG-GLGGGHYTAYCRMDDDGWHCFDDSHVSPADESSVQSKAAYLL 330
Query: 366 FYKQ 369
FY++
Sbjct: 331 FYRR 334
>gi|213407610|ref|XP_002174576.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212002623|gb|EEB08283.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 473
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/395 (29%), Positives = 168/395 (42%), Gaps = 61/395 (15%)
Query: 4 INEPVKSVKDLL---PRGLINSGNLCFLNATLQALMSCSPFV------QLLQELRTRDIP 54
+N P K K+ + P GL N GN C++N+ LQ +CSPFV Q L+ L +
Sbjct: 108 LNSPAKVGKNTISISPVGLTNLGNSCYMNSILQCCFACSPFVSLFIDGQALRSLNQNNPL 167
Query: 55 KAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS 114
G TAF +S + L SP F A + + + +
Sbjct: 168 GTGGKLTTAF-------------TSLSHQVRALQGQGVCSPKDFLANVCSIYSEFDTA-- 212
Query: 115 GRPRQEDAQEFLSFIMDQMHDELLKLQGE------STSINGANTAL-VSLAEEDEWETVG 167
Q DAQEFL+F +D +H++L G+ +T A L +S EW
Sbjct: 213 ---SQHDAQEFLNFFLDSLHEDLNSSAGKAPLPELTTEQQAAKERLPMSHLANIEWNIYK 269
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH-T 225
+N S + +D+F GQL S +K + S T PF L L I T
Sbjct: 270 RRNSSPI-----------ADLFFGQLASQIKCLTCQRTSTTFAPFSSLALPIKDTTTSCT 318
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTK 284
+E + FS E L+G V AKK++ + L +LI L RF K
Sbjct: 319 LETCISAFSMQEVLQGNNAWHCPKCDVPRDAKKTMSVSRLPSVLIFQLKRFRMIGTTHRK 378
Query: 285 LHKSVRFPLQLVLGRDLLVTPS------AEGRKYELVATVTHHGRDPSKGHYTADARYFN 338
+ S+ F ++ G ++V PS E YEL A V H+G D GHYTA + N
Sbjct: 379 IETSLEFKKRISSG--MIVPPSFQSSIYYEPVDYELFAFVNHYG-DLENGHYTATV-FHN 434
Query: 339 DQWLHFDDASVTAIGTSKVLHDQ---AYVLFYKQV 370
W + DDA V + K ++ AY+LFY++V
Sbjct: 435 YDWYYCDDAIVQPVTDFKRIYQNFSTAYILFYQKV 469
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 163/361 (45%), Gaps = 40/361 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSDFDTPS 75
GL N GN CF+N+ +Q L P ++ L++ T +I A F F + +
Sbjct: 2 GLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATLMKSIW 61
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
S+ + IS P F + ++ F P Q+D+QEFL +++ +H+
Sbjct: 62 RSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLLQGLHE 107
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
++ ++ + E D+ + K A R F S + D F GQLKS
Sbjct: 108 DINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFVGQLKS 158
Query: 196 VVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
+K G+K S T PF L L I S++V TI+ L LF+ E L+G + N
Sbjct: 159 TLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPTCSNCK 216
Query: 252 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
KS I KIL+LHL RFS G + KL+ V FPL +L + P
Sbjct: 217 TRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLT-----NLDLCPYMSNS 271
Query: 311 KYEL--VATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y + + V++H GHYTA + + +W +D VT + +S+V +AYVLFY
Sbjct: 272 HYVMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFY 331
Query: 368 K 368
+
Sbjct: 332 E 332
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 158/365 (43%), Gaps = 63/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 437 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIHLLLRLHSKDCCSKNWCLMCELEQYAS 496
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 497 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 536
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 537 VMSMQAACLD------GLGGEKQVEQSLQET----------------------TLIQQMF 568
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 569 GGRLKSKVKCLRCHHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 627
Query: 249 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 628 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 681
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 682 AGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSLNQVMSEGA 741
Query: 363 YVLFY 367
Y+LFY
Sbjct: 742 YMLFY 746
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 70
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 71 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 229
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 230 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 288
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 289 NHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLF 347
Query: 367 YK 368
Y+
Sbjct: 348 YE 349
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 379 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 438
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 439 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 478
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 479 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 510
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 511 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 569
Query: 249 NAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 570 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 623
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 624 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 683
Query: 363 YVLFY 367
Y+LFY
Sbjct: 684 YMLFY 688
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 167/364 (45%), Gaps = 44/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+N+ LQ L + + + ++ F+S + G
Sbjct: 4 GLKNLGNTCFMNSILQCLSNTKALTSFVLD--------------NSYSRFISGKSSMHGK 49
Query: 78 -----SSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+S +++ D SP+ F++ ++ F P Q+DAQEFL F++
Sbjct: 50 LMEAYASLMRSMWKSDTKETALSPATFKSQIQRFAPRFVGY-----SQQDAQEFLRFLLA 104
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT--QSFLPSALSDIF 189
+H++LL E I +S E DE + P++K+ +S S ++++F
Sbjct: 105 GLHEDLLHNSREKPKI-------ISTEEYDE---LQPEDKAVYCWKLYKSTDDSKVAELF 154
Query: 190 GGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSS 246
GQLKS ++ K S T PF L L I + T+ D L+LF+ E L G T S
Sbjct: 155 VGQLKSTLECTVCKNQSVTFDPFWDLSLPIPKISTITLLDCLKLFTREETLSGDNMPTCS 214
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
V KK + +Q +IL++H RFS G TKL+ + FP+ + + T S
Sbjct: 215 KCKTKTVCTKK-LSVQKFPQILVIHFKRFS-GIHYRTKLNTLIDFPIDKLDLLNFAGTTS 272
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVL 365
KY L A H G GHYTA + + Q W F+D V + +++V QAYVL
Sbjct: 273 TISCKYNLYAISNHSGSTVG-GHYTAYCKSPHTQTWYMFNDTRVQPVSSNEVKSSQAYVL 331
Query: 366 FYKQ 369
FY+Q
Sbjct: 332 FYEQ 335
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 435 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 494
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 495 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 534
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 535 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 566
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 567 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 625
Query: 249 NAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 626 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 679
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 680 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 739
Query: 363 YVLFY 367
Y+LFY
Sbjct: 740 YMLFY 744
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 63/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 268 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCCSKNWCLMCELEQYAS 327
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 328 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 367
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 368 VMSMQGACLD------GLGGEKQVEASLQET----------------------TLIQQMF 399
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 400 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 458
Query: 249 NAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 459 RCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPDML----DMVPFVTG 512
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 513 AGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLNQVMSEGA 572
Query: 363 YVLFY 367
Y+LFY
Sbjct: 573 YMLFY 577
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ F+G + G
Sbjct: 726 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQVDINRSN------FLGHKGEVAEEFG 779
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 780 IIMK-----ALWAGQYRYISPKDFKMTIGK----INDQFAGY-SQQDSQELLLFLMDDLH 829
Query: 135 DELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L D W N+S + +F GQ
Sbjct: 830 EDLNKADNRKRYKEENNDDLDDPKAADLAWHKHKQLNESIIVA-----------LFQGQF 878
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ RLFS E L + R +
Sbjct: 879 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECFRLFSKEEKLTDNNRFYCSHCKT 938
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + ++
Sbjct: 939 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDVSQYVIGPKSNSKR 998
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A H+G GHYTA + Q W FDD V+ I TS V AY+LFY
Sbjct: 999 YNLFAVSNHYG-GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1054
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/380 (29%), Positives = 157/380 (41%), Gaps = 72/380 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLT-----------AFV 65
GL N GN CFLNATLQ L P Q L + +P P ++
Sbjct: 137 GLYNLGNTCFLNATLQCLAYLPPLAQYFLSKKEEERVPSVLSPGAGQGHRGGGQARGGWL 196
Query: 66 GFVSDF------DTPSGGSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPR 118
G V D + +GG + ++ + GR P SP LK N R
Sbjct: 197 GLVRDLIANMHTGSGAGGGDRGDGLARREGGRSPISPKAIVGNLKAL-----NRHFRVGR 251
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
QEDA EFL ++D + L+ R +
Sbjct: 252 QEDAHEFLRHLLDALQSGCLQ----------------------------------AARVK 277
Query: 179 SFLPSALSD------IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALR 231
S P L++ IFGG L+S V+ Q S T FL L L+I+ + V +E+AL
Sbjct: 278 SNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGK-VGRLEEALA 336
Query: 232 LFSAPENLE-GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
F+A E L+ R + +V A+K + T + + L RF +GS+ S+KL K+V
Sbjct: 337 RFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSR-SSKLSKNVA 395
Query: 291 FPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
+P L L L P R Y L + H G + GHY + + N W DDA V
Sbjct: 396 YPESLRLS---LSGPEGSAR-YRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVR 451
Query: 351 AIGTSKVLHDQAYVLFYKQV 370
+G VLH AY+LFY +V
Sbjct: 452 QVGLPTVLHQHAYLLFYVKV 471
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 212 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 262
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 263 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 313
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 314 HSEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 363
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 364 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 421
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 422 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLSTFVNFPLKDLDLRE-FASQSC 480
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 481 NHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLF 539
Query: 367 YK 368
Y+
Sbjct: 540 YE 541
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 288 GLRNLGNTCFMNSILQCLSNSKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 338
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 339 ----AKLIQLLWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 389
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ A+T + +DE K++ R Q S +SD+F GQL
Sbjct: 390 HSEVNRVLVRPR----ASTDSLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 439
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 440 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 497
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS S+KL V FPL+ + R+ + S
Sbjct: 498 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDLDLRE-FASQSC 556
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 557 NHAVYNLYAVSNHSGTT-MGGHYTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLF 615
Query: 367 YK 368
Y+
Sbjct: 616 YE 617
>gi|326427127|gb|EGD72697.1| hypothetical protein PTSG_04426 [Salpingoeca sp. ATCC 50818]
Length = 1574
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 163/358 (45%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++NA LQ L + R R+ + S F
Sbjct: 1241 GLKNLGNTCYMNAVLQCLAHTKQLATYFVQKRYRN-----------HLNRRSKFGCKGEV 1289
Query: 78 SSKKKNISVLDIGRPF---SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ + + + R + SPSMF+ V ++ P Q+D QEF S ++D++H
Sbjct: 1290 AEELAELLTVLTSRQYRHLSPSMFKEVFASYCPQFAGY-----DQQDCQEFASMLLDKLH 1344
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L ++ + + + + + ++ A + W K + R S + +D+F GQ
Sbjct: 1345 EDLNRVVAKPPAKDLDLSGMDAVRAGNEAW-------KQCIARDNSII----TDLFQGQF 1393
Query: 194 KSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
+SV + + SAT PF L L + +++ +RLFS EN+ G
Sbjct: 1394 RSVTRCNTCRYESATYSPFTSLSLPVPPHGRYSLHHCIRLFSRQENMTGNNQWKCPKCKA 1453
Query: 253 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K + I L + L++HL RF + K++ + FP L LG+D +++ S ++
Sbjct: 1454 YRDAIKFMGIWRLPRCLLIHLKRFYFNGPFRDKINTMIDFPQNLQLGKDDVMSFSRPEQR 1513
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A H+G + GHY A A++ +W +DD+ V+ + +V+ AYVLFY
Sbjct: 1514 ENYSLYAVANHYG-TLTGGHYIAFAKHAG-RWEKYDDSVVSPMAPQQVVTPAAYVLFY 1569
>gi|198433676|ref|XP_002129026.1| PREDICTED: similar to ubiquitin specific protease 41 [Ciona
intestinalis]
Length = 543
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 165/367 (44%), Gaps = 51/367 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-----TRDIPKAGYPTLTAFVGFVSDFD 72
GL N GN CF+N+ LQ L + + + + R+ P G + AFV +
Sbjct: 202 GLRNIGNTCFMNSILQCLSNTTILREYCMDETYKGEINRNSPMKG-DLMRAFVEVLVRLW 260
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
P+G S SP+ F++ ++ F+P Q+D QEFL F+++
Sbjct: 261 KPNGIS--------------HSPNNFKSKIQKFSPRFMGY-----EQQDCQEFLRFLLEG 301
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+H+++ +++ +S L L+ E T+ SF+ D+F GQ
Sbjct: 302 LHEDINRVRIKSKE------PLRELSHLSPQEKARATWSWYTTKDDSFI----FDLFVGQ 351
Query: 193 LKSVVKAQGNK-ASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSST 247
L+S ++ Q + S T PF L L I YS V TI D L F+ E L+
Sbjct: 352 LESSLECQECRHTSLTYDPFWDLSLPISKKMYSNEVTTITDCLDNFTREETLDKDEKPIC 411
Query: 248 GNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
V T K + I K+L+LHL RF+ GS+ KL+ V+FP+ + R+ + +
Sbjct: 412 ERCKVRRTMTKKLSIHKFPKVLVLHLKRFNEGSRYRQKLNNLVKFPVTSLNLRN-FASKT 470
Query: 307 AEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ---WLHFDDASVTAIGTSKVLHD 360
EG Y+L A H G GHYTA +N WL ++D+SV I V
Sbjct: 471 REGNLPPTYDLYAVSNHCG-SCYGGHYTAYC--YNSSSHAWLEYNDSSVNPISDGDVCTK 527
Query: 361 QAYVLFY 367
+AYVLFY
Sbjct: 528 EAYVLFY 534
>gi|149691949|ref|XP_001501973.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Equus
caballus]
Length = 1117
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 880
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1049
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 1105
>gi|338716960|ref|XP_003363554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Equus caballus]
Length = 1011
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 774
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 943
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 944 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDIAVSSVKSSAAYILFY 999
>gi|426233322|ref|XP_004010666.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Ovis
aries]
Length = 1086
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 746 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 799
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 800 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 849
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 850 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 898
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 899 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 958
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 959 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1018
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1019 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1074
>gi|402874297|ref|XP_003900978.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
8 [Papio anubis]
Length = 1109
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 769 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 822
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 823 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 872
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 873 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 921
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 922 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 981
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 982 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1041
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1042 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1097
>gi|426233324|ref|XP_004010667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Ovis
aries]
Length = 1009
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 669 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 722
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 723 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 772
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 773 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 821
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 822 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 881
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 882 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 941
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 942 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 997
>gi|194034734|ref|XP_001927765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Sus scrofa]
Length = 1117
Score = 117 bits (293), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSN------LLGHKGEVAEEFG 830
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 880
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLAQYVIGPKNNLKK 1049
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1105
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 162/377 (42%), Gaps = 54/377 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+NA LQ+L + F +EL P + G +
Sbjct: 161 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVALRSGKTAGRRMYHTR 210
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 129
S ++S+++ R S+++ F+PD + S G +Q+DA EF+ ++
Sbjct: 211 SQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYL 269
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D +H EL S NGA+ L + +D K T S + S IF
Sbjct: 270 LDHLHREL------QYSRNGASHPL---SPQDGVRLSSTDGKCCTNGTASVVTS----IF 316
Query: 190 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAP 236
GG L++ V S PFL L LDI S+ T+ D L F+
Sbjct: 317 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDL 376
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
E L+ T +KS K IQ L K+L LHL RF + + K+ V FPL
Sbjct: 377 EELDD--TELYYCHKCKKRQKSTKKFWIQKLPKVLCLHLKRFHWTAFLRNKVDTYVEFPL 434
Query: 294 QLVLGRDLLVTPSAE---GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
+ + R L+ P Y+LVA V HHG GHYTA + +W HF+D++VT
Sbjct: 435 KGLDMRGYLLEPEKSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSH-EGRWYHFNDSTVT 493
Query: 351 AIGTSKVLHDQAYVLFY 367
V +AY+LFY
Sbjct: 494 LTNEDTVRKAKAYILFY 510
>gi|115497674|ref|NP_001069594.1| ubiquitin carboxyl-terminal hydrolase 8 [Bos taurus]
gi|113911783|gb|AAI22572.1| Ubiquitin specific peptidase 8 [Bos taurus]
gi|296483106|tpg|DAA25221.1| TPA: ubiquitin specific peptidase 8 [Bos taurus]
Length = 1085
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 745 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 798
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 799 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 848
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 849 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 897
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 898 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 957
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 958 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1017
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1018 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISISSVKSSAAYILFY 1073
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 155/371 (41%), Gaps = 57/371 (15%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
K V + P GL N GN CFLNATLQ L P Q L + P+ G
Sbjct: 62 KQVHRMGP-GLRNLGNTCFLNATLQCLSYLPPLAQHLLKGFYGQGPQ----------GIA 110
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN------SISGRP----R 118
S P GG + + +L + + + P + GR R
Sbjct: 111 SRGPRPMGGFREFTKVEILAAMEQHTKQVHQGQFTGLGAISPKVLVQNLRMIGRQFRQGR 170
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
QEDA EFL ++D+M D LK +G +S A R
Sbjct: 171 QEDAHEFLRHLLDKMVDCYLKRRGVKSS--------------------------APNRLA 204
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
P ++ IFGG L+S +K + S T PF+ L +D+ S V +I+ ALR F A E
Sbjct: 205 ETTP--INRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDL-SRGVRSIDVALRRFVATE 261
Query: 238 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
L G G V A+KS+ + L+L L RF + ++ ++K+ ++F L
Sbjct: 262 RLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVF-TRKASKIKDHIQFADVL- 319
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
+L V+ Y+L V H G S GHY A R W DD SV+ +
Sbjct: 320 ---NLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWSRMDDCSVSKVKRET 376
Query: 357 VLHDQAYVLFY 367
VL DQAYVLFY
Sbjct: 377 VLRDQAYVLFY 387
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 154/356 (43%), Gaps = 53/356 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL+N+ N CFLNA L L +P Q LL + ++ G+ L A V+ T +
Sbjct: 78 GLVNAFNTCFLNAVLCCLTYTAPLTQYLLTDNHKKNCTIHGFCGLCAMSEHVNKCFTTAK 137
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ IS P+ F + LK + ++ + GR QEDA EF F++D
Sbjct: 138 SLMRFSAIS---------PNYFTSNLKKISSNL---LLGR--QEDAHEFFMFLLDAFTKS 183
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + T EED + IFGG+L+S
Sbjct: 184 YTPLNSKLTP-----------QEEDA--------------------GLVHTIFGGKLQSQ 212
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 255
V KA S + FL L + I E +I++AL F + ++GY + V A
Sbjct: 213 VTCNNCKANSNSYDRFLDLSVQINGEK--SIQNALSRFIEADTIDGYNCDACKQK--VRA 268
Query: 256 KKSVKIQTLSKILILHLMRFSYG--SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K + + L++HL RF Y S G K+HKSV+FP L + + + +Y+
Sbjct: 269 YKQMTANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKEKKVQAAEYK 328
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY A + WL +D +V + ++VL +AY+LFY+Q
Sbjct: 329 LYAVLVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYMLFYEQ 384
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 164/364 (45%), Gaps = 47/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----SAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 161 HNEVNRV----TVRPKSNPENLDRLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + + S PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 211 KSSLTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 249 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
G K+ +K IQ KIL+LHL RFS ++KL V FPL+ + R+ +
Sbjct: 269 RCGA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVSFPLRDLDLRE-FASE 325
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L A H G GHYTA R +W F+D+SVT + +S+V AY+
Sbjct: 326 NTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYL 384
Query: 365 LFYK 368
LFY+
Sbjct: 385 LFYE 388
>gi|167518329|ref|XP_001743505.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778604|gb|EDQ92219.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 91 RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGA 150
R +P F+A L +F P + +Q+DAQEF SF +D +H++L +++ + N
Sbjct: 56 RYLAPKFFKATLASFAPQFEGT-----QQQDAQEFASFFLDGLHEDLNRVRKKVCDCN-L 109
Query: 151 NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQ 209
+ LA + W ++ S + D+F GQ +S ++ S
Sbjct: 110 DGMPDHLAADKAWNEYLTRHNSIIV-----------DLFQGQYRSAMRCLTCGHESLNFS 158
Query: 210 PFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILI 269
PF+ L L I + I L+ F E + G+R A A K++ I L +L+
Sbjct: 159 PFMFLTLPIPANPSVDIRACLQEFVRAERVNGWRCPKCKCAR--DASKTLSIWRLPPLLM 216
Query: 270 LHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP--SAEGRKYELVATVTHHGRDPSK 327
+HL RF++ KL V FPL + +D + P + R Y+L H+G + S
Sbjct: 217 IHLKRFTFSGPFRDKLSTRVDFPLTNLKIQDGVANPKLQEQKRDYKLFGVSNHYG-NMSG 275
Query: 328 GHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFY 367
GHY A R F +W FDD++V+ + S+V + AY+LFY
Sbjct: 276 GHYIAFCRDFQSRRWYKFDDSAVSPMPESQVCSNAAYLLFY 316
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 270 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 320
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 321 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 371
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 372 HNEVNRVTARPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 421
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGY-RTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 422 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGEEKPTCC 479
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 480 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 538
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVTA+ +S+V AY+LF
Sbjct: 539 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLF 597
Query: 367 YK 368
Y+
Sbjct: 598 YE 599
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 120/254 (47%), Gaps = 40/254 (15%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
RQED+ EFL ++D MH+ LK ++ P +A T
Sbjct: 33 RQEDSHEFLRCLLDAMHEACLK----------------------RFKPKPPPELAATT-- 68
Query: 178 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+ IFGG+L+S ++ +G + S T PFL L L+I ++E AL F+AP
Sbjct: 69 ------FVYRIFGGRLRSQIECEGVDYVSRTYDPFLDLSLEI--NRAQSLERALSAFTAP 120
Query: 237 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
E L+G YR N +V A K + ++ +L +H RF YG G+ K++K V F
Sbjct: 121 EVLDGPNKYRCPK--NNKLVRAVKRISVEEAPNVLTVHFKRFEYGGFGA-KINKKVDFGT 177
Query: 294 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 353
QL L R + + YEL + HHG + GHY + N W DD VTA+G
Sbjct: 178 QLDL-RPYMSNVKGPQQLYELYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVG 236
Query: 354 TSKVLHDQAYVLFY 367
VL +AY+LFY
Sbjct: 237 ERTVLDQRAYILFY 250
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 158/365 (43%), Gaps = 64/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
V+ + PRGL N GN C+ NA LQ LM P + LL L ++D K G + + S
Sbjct: 430 VRGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSKNGC-LMCELEQYAS 488
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 489 ---------------TLRESGGPVSPSRILSNLRNIGCRL-----GGGSQEDAHEFLRHL 528
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 529 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 560
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 561 GGRLKSKVKCLRCLHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGENMYKCG 619
Query: 249 NA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL + L RF G G K++K V FP L D++ +
Sbjct: 620 RCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYG--KINKCVTFPEML----DMVPFVTG 673
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V A+ ++V+ + A
Sbjct: 674 AGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSPNQVMSEGA 733
Query: 363 YVLFY 367
Y+LFY
Sbjct: 734 YMLFY 738
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 72
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 145 MHESCLR---------------------------GCKQSETTSKDSSLI----YDIFGGQ 173
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA- 250
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGRCR 231
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 232 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 288
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 289 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 73
GL N GN CF+N+ LQ L + LQ RD+ + ++ F + T
Sbjct: 113 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 172
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
SS +N+S PS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 173 ----SSPNENVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 214
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ A+T + +DE K++ R Q S +SD+F GQL
Sbjct: 215 HSEVNRVLVRPR----ASTDTLDHLPDDE------KSRQMWRRYQEREDSRISDLFVGQL 264
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 265 KSSLTCSECGYCSTAFDPFWDLSLPIPKKSYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 322
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V F L+ + R+ + S
Sbjct: 323 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRTSKLTTFVNFQLKDLDLRE-FASQSC 381
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 382 NHAVYNLYAVSNHSG-TTMGGHYTAYCKNPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLF 440
Query: 367 YK 368
Y+
Sbjct: 441 YE 442
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 72
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 52 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCNMCAMEAHVTQSLLH 109
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 110 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNT 144
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 145 MHESCLR---------------------------GCKQSETTSKDSSLI----YDIFGGQ 173
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA- 250
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 174 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKVEELQGDNAYYCGRCR 231
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 232 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 288
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 289 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 347
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 149/361 (41%), Gaps = 71/361 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 93 GLWNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKSSCHIAGFCALCAIQNHVS------- 145
Query: 77 GSSKKKNISVLDIGRPFSPS----MFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
++ GR SP + +NF + RQEDA E++ +++
Sbjct: 146 -------CALQATGRIVSPQDMVGNLRCISRNFR---------KARQEDAHEYMVNLLES 189
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
MH L G + GA F S + IFGG+
Sbjct: 190 MHKCCLP-SGVPSESPGA-----------------------------FEKSLVHKIFGGR 219
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSST 247
L+S VK Q + +S PFL L L+I +++ AL F+A E L+G Y
Sbjct: 220 LRSQVKCRQCSYSSNKFDPFLDLSLEILK--ADSLQKALANFTAAELLDGGEKQYHCQRC 277
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A K + I +L +HL RF Y + K+ K VRF L L V+ S+
Sbjct: 278 KQK--VQAVKQLTIHKAPYVLAIHLKRF-YAHDPNIKIKKKVRFDSALNL--KPFVSGSS 332
Query: 308 EGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
+G KY L + H G GHY R N+ W DD V+ +G +VL+ QAY+LF
Sbjct: 333 DGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVLNQQAYMLF 392
Query: 367 Y 367
Y
Sbjct: 393 Y 393
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 155/365 (42%), Gaps = 63/365 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVS 69
+ + PRGL N GN C+ NA LQ LM P + LL L ++D + + + S
Sbjct: 431 ARGISPRGLFNCGNSCYANAVLQCLMCTKPLMIYLLLRLHSKDCSSKNWCLMCELEQYAS 490
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
++ + G P SPS + L+N + G QEDA EFL +
Sbjct: 491 ---------------TLRESGGPLSPSRILSNLRNIGCRL-----GGGTQEDAHEFLRHL 530
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L + G SL E + + +F
Sbjct: 531 VMSMQAACLD------GLGGEKHVEPSLQET----------------------TLIQQMF 562
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+LKS VK + S + + L L+I+ V +++DAL F+APE+L+G G
Sbjct: 563 GGRLKSKVKCLRCYHESERYENIMDLTLEIHG-WVESLQDALTQFTAPEDLDGDNMYKCG 621
Query: 249 NAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
V A+K + + + IL L L RF G G K++K V FP L D++ +
Sbjct: 622 RCSAYVKARKQLSVHEVPNILTLVLKRFQSGKYG--KINKCVTFPDML----DMVPFVTG 675
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + + GHY + + WL DD+ V + ++V+ + A
Sbjct: 676 SGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGA 735
Query: 363 YVLFY 367
Y+LFY
Sbjct: 736 YMLFY 740
>gi|363737748|ref|XP_413830.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Gallus
gallus]
Length = 1125
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 785 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 838
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 839 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 888
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 889 EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIVA-----------LFQGQF 937
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 938 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 997
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 998 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1057
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1058 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1113
>gi|365985329|ref|XP_003669497.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
gi|343768265|emb|CCD24254.1| hypothetical protein NDAI_0C05950 [Naumovozyma dairenensis CBS 421]
Length = 1080
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 151/335 (45%), Gaps = 90/335 (26%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE------------------ 160
QEDA+EFL+ ++DQ+H+E++ E + N L S+ +E
Sbjct: 750 QEDAEEFLTQLLDQLHEEIISA-IECLTDNEIENLLQSITDEQLKIFIIRNLSRYNKAEF 808
Query: 161 -----------------------------DEWETV------GPKNKSAVTRTQSFLPSAL 185
+EW V G KNK+AV RT PS +
Sbjct: 809 ITKISPKLKELINKYGTMTDDTNDSGDSSNEWHEVSGTSKKGKKNKTAVKRTVDVTPSPI 868
Query: 186 SDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 243
S+IFGGQ +SV+ NK S T+ PF + LDI ++ +E A + FS E L ++
Sbjct: 869 SNIFGGQFRSVLDIPFNKESQSITLDPFQTIQLDISDPMINDLETAFKKFSEFE-LLPFK 927
Query: 244 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGS-----QGST----------KLHKS 288
+SS + V AKK I L ++L++ L RFS+ S G T K+ K
Sbjct: 928 SSSGKD---VEAKKQTFIDKLPQVLLIQLKRFSFVSNIGKDNGMTNYNSYNGRIEKIRKK 984
Query: 289 VRFPLQLVLGRD----LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND--QWL 342
+ + +L++ + ++ + RKY+L A V HHG P GHYTAD Y D +W
Sbjct: 985 INYNHELLVPVESVSSAILKNNESSRKYKLRAVVYHHGSSPDGGHYTADI-YNKDLKKWF 1043
Query: 343 HFDDASVTAIGTSKVLH--------DQAYVLFYKQ 369
DD ++T + + V++ AY+L Y++
Sbjct: 1044 MIDDVNITELEDADVVNGGDNGLDTRTAYILMYEK 1078
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT----LTAFVG 66
+K ++ RG++N N+CF+++ LQ L+SC PF+ +L TR++ P+ L A V
Sbjct: 560 IKSIVSRGIVNVANICFMSSILQMLLSCKPFIDVLNVTSTRNLNSRVGPSSTKLLDACVA 619
Query: 67 FVSDFD 72
S+FD
Sbjct: 620 LYSEFD 625
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 162/373 (43%), Gaps = 48/373 (12%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGF 67
K+V+ L GL N GN CF+N+ LQ L + LQ RD+ + F
Sbjct: 321 KTVQGLT--GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYVRDLNNNSRMQMNLMAEF 378
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
K I L P SPS F+ ++ + P Q+DAQE
Sbjct: 379 A-------------KLIQALWTSSPNESVSPSEFKTQIQRYAPRFVGY-----NQQDAQE 420
Query: 125 FLSFIMDQMHDE----LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
FL F++D +H E L++ +G G++ +L L +E+ K + R +
Sbjct: 421 FLRFLLDGLHSEVNRILVRPKG------GSSDSLDHLPDEE-------KGRQMWMRYLAR 467
Query: 181 LPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPE 237
S + D+F GQLKS + S PF L L I ++ + D LRLF+ +
Sbjct: 468 EDSRIGDLFVGQLKSSLTCSVCGHCSTAFDPFWDLSLPIAKKSYGEVNLADCLRLFTKED 527
Query: 238 NLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
L+G + + T K IQ KIL+LHL RFS S+KL V FPL+ +
Sbjct: 528 ILDGDEKPTCCHCKARTKCTKKFSIQRFPKILVLHLKRFSEARIRSSKLTTFVNFPLKDL 587
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTS 355
R+ + S Y L A H G GHYTA + + +W F+D+ VT + S
Sbjct: 588 DLRE-FASQSCNHAVYNLYAVSNHSGTT-MGGHYTAYCKNPVSGEWHAFNDSRVTPLSAS 645
Query: 356 KVLHDQAYVLFYK 368
V AY+LFY+
Sbjct: 646 HVRSSDAYLLFYE 658
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 161/371 (43%), Gaps = 50/371 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 71
GLIN GN CF+N+ LQ L + P E+ ++ +G + AF V
Sbjct: 168 GLINLGNTCFMNSALQCLSNLQPLTDYCLQNKEDNEINIQNPMGSGGVVIKAFANLVRQI 227
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
S SP F V+ F N I RQ+D+QEFL +++D
Sbjct: 228 WNQKEDS--------------VSPDEFLRVISYF-----NKIYSSGRQQDSQEFLLYLLD 268
Query: 132 QMHDELLKLQG-----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
Q+H++L +++ + N + D W +NKS +
Sbjct: 269 QIHEDLNRVEKKPYVEQKEYFKNLNQKELEKLAADSWGDYLKRNKSVIV----------- 317
Query: 187 DIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEG-Y 242
D+F GQLK+ +K K A +PF+ L + I +A + I+D + F+ E L+G
Sbjct: 318 DLFQGQLKNTLKCLKCKTAKYQFEPFMYLTVPIPQKAENEINIQDCIEQFTEKEILDGDE 377
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDL 301
+ ++K + + L IL++ + RF Y +Q K+ V+FP+Q + +
Sbjct: 378 KWFCPECKDFQKSEKKIDLWKLPPILMICMKRFQYTAQSKKKITTKVQFPVQHFDMSEFI 437
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIG--TSKVL 358
T E Y+L + ++H G + GHY A + D QW F+D+ + I +
Sbjct: 438 PKTLQKEKPIYDLFSVISHKGY-LNFGHYVAYCKNQEDKQWYLFNDSKTSLIQDPEENIP 496
Query: 359 HDQAYVLFYKQ 369
+AYVLFY++
Sbjct: 497 KKEAYVLFYQK 507
>gi|363737746|ref|XP_003641901.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Gallus
gallus]
Length = 1116
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSN------FLGHKGEVAEEFG 829
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 830 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 879
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRYKEENNDHLDDLKAAELAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 988
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1048
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1104
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 166/364 (45%), Gaps = 43/364 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 75
GL N GN CF+N+ +Q L + ++ LLQ+ DI T +A G + F
Sbjct: 425 GLKNIGNTCFMNSVIQCLSNTKTLLEYLLQDHYVNDIN----TTTSAMKGSLIKAF---- 476
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
KK S R + S ++ ++ F P Q+DAQEFL ++++ +H+
Sbjct: 477 -AEVIKKLWSQDASDRVVNTSSLKSQIQRFAPRFIGYA-----QQDAQEFLRYLLEGLHE 530
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
++ +++ + I + E DE T K+ + R S + D F GQLKS
Sbjct: 531 DVNRVKEKPKPI---------ITEIDEKLTDSEKSAESWNRYLRMDNSKIVDYFVGQLKS 581
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHT-IEDALRLFSAPENLEG-YRTSSTGNAGV 252
+K S T PF L L I A + L F+ E L+G + + +
Sbjct: 582 TLKCTHCGHCSVTFDPFWDLSLPIPQRAGQVRLAQCLDSFTREETLDGDEKPTCSKCKER 641
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL------VTPS 306
KS IQ KIL++HL RFS + KL +V FPL+ G D+ +TP
Sbjct: 642 RKCTKSFTIQKFPKILVIHLKRFSLAERFRGKLSVTVDFPLE---GLDMSNYAADNITPC 698
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+Y L A H G S GHYTA R+ + W ++D+ V++I + ++ +AYVL
Sbjct: 699 ----RYNLYAISNHSGTTYS-GHYTAYCRHPYTKAWHEYNDSRVSSISSKAIVSGEAYVL 753
Query: 366 FYKQ 369
FY+Q
Sbjct: 754 FYEQ 757
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 150/358 (41%), Gaps = 58/358 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 76
GL+N GN CFLN+ LQ L P L + R + G + + +G
Sbjct: 108 GLVNLGNTCFLNSALQCLTYTPPLANYLMSNQHRAQCRVNGQFCMLCSLQHHQSASFGNG 167
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
G S RP + +LKN + GR QEDA EF+ + +D M
Sbjct: 168 GKSI----------RPMN------ILKNLRIIAKHLQFGR--QEDAHEFIRYSVDAMQRS 209
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L I+ T LV IFGG L+S
Sbjct: 210 CLFGLPSKLDIHTKTTTLVY------------------------------QIFGGYLRSR 239
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK + +A S T PFL L LDI + + + L F PE L G Y+ +
Sbjct: 240 VKCRQCRAVSDTFDPFLDLSLDINKQESNDLRKCLENFVKPELLHGDNLYKCYQCKKS-- 297
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A K+ I +L + L RFS S K+++ + +P +L LG + EG Y
Sbjct: 298 VPASKTFSIHRPPNVLTVQLKRFS--SFMGNKINRDITYPSKLNLG-PYTSSDRNEGPIY 354
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
+L A + H G + GHY A A+ N QW F+D+SV + + + L+ QAY+LFY +V
Sbjct: 355 DLYAVLVHSGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQALNQQAYLLFYHRV 412
>gi|449471131|ref|XP_002197001.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Taeniopygia
guttata]
Length = 1087
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 160/357 (44%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYQADINRSN------FLGHKGEVAEEFG 800
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + + SG Q+D+QE L F+MD +H
Sbjct: 801 VIMK-----ALWAGQYKYISPKDFKITIGK----INDQFSGYS-QQDSQELLLFLMDGLH 850
Query: 135 DELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L S A E W N+S + +F GQ
Sbjct: 851 EDLNKADNRKRYKEENNDHLDDSSAAEIAWHKHKQLNESIIVA-----------LFQGQF 899
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKRSRTFEAFMYLSLPLASSSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 959
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKTSLKR 1019
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1075
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 163/377 (43%), Gaps = 54/377 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+NA LQ+L + F +EL P + G +
Sbjct: 85 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVALRSGKTAGRRMYHTR 134
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFLSFI 129
S ++S+++ R S+++ F+PD + S G +Q+DA EF+ ++
Sbjct: 135 SQGDNSVSLVEEFRKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGY-QQQDAHEFMRYL 193
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D +H EL S NGA+ + + +D + K PS ++ IF
Sbjct: 194 LDHLHREL------QYSRNGASHPV---SPQDGVRLSSAEGKCCTNGA----PSVVTSIF 240
Query: 190 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAP 236
GG L++ V S PFL L LDI S+ T+ D L F+
Sbjct: 241 GGLLQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDL 300
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
E L+ T +KS K I L K+L LHL RF + + K+ V FPL
Sbjct: 301 EELD--ETELYYCHKCKKRQKSTKKFWIHNLPKVLCLHLKRFHWTAFLRNKIDTYVEFPL 358
Query: 294 QLVLGRDLLVTP--SAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
+ + R L+ P S G Y+LVA V HHG GHYTA + W HF+D++VT
Sbjct: 359 KGLDMRGYLLEPENSLPGSCLYDLVAVVVHHGSGVGSGHYTAYGSH-EACWYHFNDSTVT 417
Query: 351 AIGTSKVLHDQAYVLFY 367
V +AY+LFY
Sbjct: 418 LTNEDTVRKAKAYILFY 434
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 74 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 124
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 125 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 175
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 176 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 225
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 226 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 283
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 284 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 342
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 343 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 401
Query: 367 YK 368
Y+
Sbjct: 402 YE 403
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT---LTAFVGFVSD--FD 72
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 380 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 437
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 438 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 472
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 473 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 501
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA- 250
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 502 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 559
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 560 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 616
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 617 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 675
>gi|402218406|gb|EJT98483.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 865
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 182/415 (43%), Gaps = 71/415 (17%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG--YPTLTAFVGFVSDFD 72
+P GL N+GNLCF N LQ L+ C PF +L+ E+ R G P L A V F+
Sbjct: 462 VPMGLWNTGNLCFANCILQTLVYCGPFYELVTEIGQRIGGAVGGRTPFLDAMVLFLRQIP 521
Query: 73 TPSGGSSKKKNISVLD---IGRPFSPSMFEAVLKN-----FTPD-VPNSISGRPR----- 118
+ K + +D +G P S + V+K PD V N +S P+
Sbjct: 522 ITTSPDPWKARLDEVDFPGLGGPASEAAKMEVIKQKESQGMVPDYVYNGLSDYPKSKQIL 581
Query: 119 ---QEDAQEFLSFIMDQMHDE---LLKLQGESTSINGANTALVSL--------------- 157
QED EF F++D + +E +LK+ + + A++ S
Sbjct: 582 KGGQEDVDEFFCFLLDVLEEELLTVLKIFSANPTPASASSTQASFGGKKLTPGKPDDEFE 641
Query: 158 -------------AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA 204
AE+ EW VG +NK V+R+ +A++ +F + ++V + G K
Sbjct: 642 VRRPVSPGTAARGAEDGEWTEVGKRNKKVVSRSILAAETAITKLFCLKTRTVDRRPGAKD 701
Query: 205 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 264
+ ++P L L + E + IE AL F++ E +EG S + V + TL
Sbjct: 702 AVLIEPQQRLSLSVIDEKITNIEQALHAFASVETMEGTNLS-----------RQVMLDTL 750
Query: 265 SKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTP---SAEGRKYELVATVTH 320
+L+L L R+ G K K + L + + L +P SA KY L A + H
Sbjct: 751 PPVLVLQLQRWGPRRNGRWEKTEKEIAITQILEIPNEAL-SPARRSAILPKYRLFAVLYH 809
Query: 321 HGRDPSKGHYTADA-RYFNDQWLHFDDASV---TAIGTSKVLHDQ-AYVLFYKQV 370
G +GHYT D R +W+H+D+ + + G K+ + AY+L+Y ++
Sbjct: 810 DGLSAQQGHYTLDVLRQDCSEWIHYDNEQISLASPPGEEKLRDGRVAYMLYYLRI 864
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ T + G + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S ++ L L +++ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLRE-FASENT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|326926643|ref|XP_003209508.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Meleagris
gallopavo]
Length = 1124
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 161/357 (45%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + + L DI ++ F+G + G
Sbjct: 784 GLRNLGNTCYMNSILQCLCNAPHLAEYFNRNLYHDDINRSN------FLGHKGEVAEEFG 837
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 838 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 887
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 888 EDLNKADNRKRYKEENNDHLDDLRAAELAWQKHKQLNESIIVA-----------LFQGQF 936
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 937 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 996
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 997 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1056
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1057 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1112
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 151/366 (41%), Gaps = 65/366 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ L P + LL +R + + + V
Sbjct: 375 VIDLTPRGLVNCGNSCYANAVLQCLTCTKPLIVFLLHRSHSRACCEIDWCLMCELEQHV- 433
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P SPS ++N + G QEDA EFL +
Sbjct: 434 --------------MMLRECGGPLSPSRILLHMRNINHQI-----GDGSQEDAHEFLRLL 474
Query: 130 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+ M L KL GE + V P+ + + +
Sbjct: 475 IASMQSICLEKLGGE--------------------DKVDPRLQET---------TFIQHT 505
Query: 189 FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
FGG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE L+G
Sbjct: 506 FGGRLRSKVKCLRCHHESERYENIMDLTLEIFG-WVKSLEDALTQFTTPEELDGENMYRC 564
Query: 248 GN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
G A V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 565 GRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFPDML----DMIPFMT 618
Query: 307 AEGRK---YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
G Y L A V H GHY A + W DD V + S+V+ +
Sbjct: 619 GTGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQVMLEG 678
Query: 362 AYVLFY 367
AY+LFY
Sbjct: 679 AYILFY 684
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 165/376 (43%), Gaps = 75/376 (19%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 69
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 394 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFRK---------TLCALWQ--- 435
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
GS FSP S+F V K +PN G +Q+DA EF+ +
Sbjct: 436 -------GSQTA-----------FSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 471
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D +H L+LQG NG + + + L E T+ NK + + ++ I
Sbjct: 472 LLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGAST----VVTAI 517
Query: 189 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 235
FGG L++ V S PFL L LDI S+ V ++ D LR F+
Sbjct: 518 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 577
Query: 236 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 294
E L E + K IQ L K+L LHL RF + + K+ V FPL+
Sbjct: 578 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLR 637
Query: 295 LVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 351
+ + L+ P G + Y+L A V HHG GHYTA A + +W HF+D++VT
Sbjct: 638 GLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTL 696
Query: 352 IGTSKVLHDQAYVLFY 367
V+ +AY+LFY
Sbjct: 697 TDEETVVKAKAYILFY 712
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/361 (30%), Positives = 158/361 (43%), Gaps = 43/361 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 128 GLGNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 178
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 179 ----AKLIQLLWTSSPNHSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 229
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD+F QL
Sbjct: 230 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVAQL 279
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 280 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 337
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 338 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 396
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 397 NHAVYNLYAVSNHSGATMG-GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVPTSDAYLLF 455
Query: 367 Y 367
Y
Sbjct: 456 Y 456
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A V +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYVRDLHHSS----NAHTALVEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ +A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVAPRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + A + +F
Sbjct: 262 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 312
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + I SPS F+ ++ F P Q+DAQEFL F++D +H+E
Sbjct: 313 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 366
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ ++ S N N L L +E+ K + + S + D+F GQLKS
Sbjct: 367 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 416
Query: 197 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 250
+ +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 417 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 474
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 475 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 533
Query: 311 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 534 VYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 591
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 326
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 377
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 378 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 427
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 428 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 485
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 486 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 544
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 545 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 603
Query: 367 YK 368
Y+
Sbjct: 604 YE 605
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD--FD 72
GL N GN C+LNA LQ L P + L + YP + A V+
Sbjct: 97 GLQNIGNSCYLNAVLQCLTHTPPLADYM--LSQEHSQRCCYPEGCKMCAMEAHVTQSLLH 154
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ SGG K PS ++ S + RQEDA EFL F ++
Sbjct: 155 SHSGGVMK--------------PS-----------EILTSTFHKHRQEDAHEFLMFTLNA 189
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
MH+ L+ G K ++ S + DIFGGQ
Sbjct: 190 MHESCLR---------------------------GCKQSETSSKDSSLI----YDIFGGQ 218
Query: 193 LKSVVKAQGNKAS-ATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA- 250
++S +K + + + PFL L LDI S +++ AL E L+G G
Sbjct: 219 MRSQIKCHHCQGTLDSYDPFLNLFLDICS--AQSVKQALEDLVKLEELQGDNAYYCGRCR 276
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ A K+ K+QT SK+L+L L R SY G KL++ V +P L L + L P+A
Sbjct: 277 EKMPASKTTKVQTASKVLLLVLNR-SYDF-GGDKLNRVVSYPEYLDL-QPYLSQPTAGPL 333
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G S GHY + + +W DD+ VT S VL + AY+LFY Q
Sbjct: 334 PYALYAVLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQ 392
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 41 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 91
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 92 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 142
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 143 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 192
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 193 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 250
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 251 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 309
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 310 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 368
Query: 367 YK 368
Y+
Sbjct: 369 YE 370
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 148/371 (39%), Gaps = 64/371 (17%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGF 67
K V + P GL+N GN CF NA LQ L P L + + ++ I + G A
Sbjct: 30 KHVNKIGP-GLLNVGNTCFCNAVLQCLTYTPPLANLCKAQEHSKRITRDGQGKFDALKEV 88
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS---ISGR---PRQED 121
T S + + VLK ++ NS I R RQED
Sbjct: 89 ERHIITSSRCT--------------------QGVLK--PSNIVNSFRKIGARLRLGRQED 126
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EF +M+ MH A+ A E P +++A T
Sbjct: 127 AHEFTRLLMEAMHL--------------ADLAACRFTE-------SPYSRAAQT------ 159
Query: 182 PSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ IFGG L+S V+ + + S T FL L L+I + I DALRLF+ PE L+
Sbjct: 160 -GLVHGIFGGHLRSQVRCETCRYNSNTYDAFLDLSLEI--KKADNITDALRLFTKPEILD 216
Query: 241 GYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLG 298
G + G T A K + +L LHL RF G S KL K V F L L
Sbjct: 217 GNNKYKCSHCGCKTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTLQLD 276
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
+ G +Y L V H G GHY A + N W DD SV + S V
Sbjct: 277 -PYMSEGEKAGSRYNLYGVVVHSGHSMKSGHYYAFVKNSNGVWYEMDDDSVRQVSYSAVA 335
Query: 359 HDQAYVLFYKQ 369
QAY+LFY Q
Sbjct: 336 RQQAYMLFYVQ 346
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 282 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 332
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 333 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 383
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 384 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 433
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 434 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 491
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 492 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 550
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 551 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 609
Query: 367 YK 368
Y+
Sbjct: 610 YE 611
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 162/359 (45%), Gaps = 37/359 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + A + +F
Sbjct: 263 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLNSSSH----AHTALMEEF----- 313
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + I SPS F+ ++ F P Q+DAQEFL F++D +H+E
Sbjct: 314 -AKLIQTIWTSSANDVVSPSEFKTQIQRFAPRFVGY-----NQQDAQEFLRFLLDGLHNE 367
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ ++ S N N L L +E+ K + + S + D+F GQLKS
Sbjct: 368 VNRVTVRPKS-NPEN--LDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQLKSS 417
Query: 197 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 250
+ +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 418 LTCTECGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 475
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 476 ARKRCIKKFSIQKFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 534
Query: 311 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 535 VYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 592
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ T + G + +F
Sbjct: 274 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSH----TSSVHTGLMEEF----- 324
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 325 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 375
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S ++ L L +++ K + + S + D+F GQL
Sbjct: 376 HNEVNRVAVRPKS---SHENLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 425
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 426 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 483
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 484 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLSTFVNFPLRDLDLRE-FASENT 542
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 543 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 601
Query: 367 YK 368
Y+
Sbjct: 602 YE 603
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 165/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 56 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 106
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 107 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 157
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 158 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 207
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 208 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 265
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 266 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 324
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 325 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 383
Query: 367 YK 368
Y+
Sbjct: 384 YE 385
>gi|255083302|ref|XP_002504637.1| predicted protein [Micromonas sp. RCC299]
gi|226519905|gb|ACO65895.1| predicted protein [Micromonas sp. RCC299]
Length = 368
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 166/396 (41%), Gaps = 76/396 (19%)
Query: 6 EPVK---SVKDLLP---RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP 59
EPV +V D +P RGL N GN CFLN+ LQAL +P +L R
Sbjct: 14 EPVDLRWTVGDDVPPVGRGLRNLGNSCFLNSILQALTHTAPLAKLCLARRH--------- 64
Query: 60 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR-PFSPSMFEAVLKNFTPDVPNSISGRPR 118
TA ++ ++ + I R +P E V N + + GR
Sbjct: 65 --TANCAL----------TNAREPCAFCIIERHAIAP---EEVFGNLRLLARHFVRGR-- 107
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
QEDA E L ++ M D L G ++ G + S+ + E T +
Sbjct: 108 QEDAHELLRLSLEAMDDSCLANCGRPSARRGGHRGQSSVVFDPE------------TGAR 155
Query: 179 SFLPSALSDIFGGQLKSVVK-AQGNKASATVQPFLLLHLDI------------------- 218
P+A+ IF G+ +++V+ A+ S T PFL + L++
Sbjct: 156 LAPPTAVERIFQGKFRNLVRCARCGHESKTYDPFLDVSLELPGREDRSSHGGGYGPGYLR 215
Query: 219 -YSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMR 274
A ++E AL+ F+ E LEG YR + + A K + I IL++HL R
Sbjct: 216 GSGSARGSVESALKNFTEEERLEGENAYRCERCKD--LCPATKRLTIHEAPAILVVHLKR 273
Query: 275 FS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTAD 333
F YG K++ V F +L LG + G Y L A VTH G D Y A
Sbjct: 274 FDHYGG----KINSPVDFTERLTLGGHMSEDAEEAGPAYRLYAMVTHSGNDAIASFYGAA 329
Query: 334 ARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
+D+W DD+SV + + V +QAYVLFY++
Sbjct: 330 TNASDDEWYLCDDSSVRRVNRADVFDEQAYVLFYER 365
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 66
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 67 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 117
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 118 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 167
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 225
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 226 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 284
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 285 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 343
Query: 367 YK 368
Y+
Sbjct: 344 YE 345
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 169/384 (44%), Gaps = 68/384 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN F+N+ LQ L + +P L++ +I + D P G
Sbjct: 10 GLGNLGNTXFMNSALQCLSNTAPLTDYFLKDEYEAEINR----------------DNPLG 53
Query: 77 -----GSSKKKNISVLDIGRP--FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + I + GR +P MF+ + F P SG +Q+D+QE L+F+
Sbjct: 54 MKGEIAEAYAELIKQMWSGRDAHVAPRMFKTQVGRFAP----QFSGY-QQQDSQELLAFL 108
Query: 130 MDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
+D +H++L +++ E NG A+V+ ++ WE +N S +
Sbjct: 109 LDGLHEDLNRVKKKPYLELKDANGRPDAVVA---KEAWENHRLRNDSVIV---------- 155
Query: 186 SDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIE----------------- 227
D F G KS +V + K S T PF L L + + +E
Sbjct: 156 -DTFHGLFKSTLVCPECAKVSVTFDPFCYLTLPLPLKKDRVMEGPMLQPQKKKKTTVALR 214
Query: 228 DALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLH 286
D + LF+ E L + N A K + +L KIL++HL RFSY KL
Sbjct: 215 DCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRFSYNRYWRDKLD 274
Query: 287 KSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFD 345
V FP++ + + + SA Y+L+A H+G GHYTA A+ N +W +FD
Sbjct: 275 TVVEFPIRGLNMSEFVCNLSARPYVYDLIAVSNHYGA-MGVGHYTAYAKNKLNGKWYYFD 333
Query: 346 DASVTAIGTSKVLHDQAYVLFYKQ 369
D++V+ +++ AYVLFY++
Sbjct: 334 DSNVSLASEDQIVTKAAYVLFYQR 357
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 172/365 (47%), Gaps = 46/365 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+N+ LQ L S QL A Y ++ + D ++ G
Sbjct: 7 GLRNLGNTCFMNSILQCL---SHTKQL-----------ADYCMNENYIFDLKDSNSSMKG 52
Query: 78 SSKKKNISVL-DIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ K +++ + R SPS F+A ++ F P Q+D+QEFL F+++
Sbjct: 53 ALMKAFANLIRQMWRGSSDAVSPSAFKAQIQKFAPRFVGY-----NQQDSQEFLRFLLEG 107
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP--SALSDIFG 190
+HD++ K+Q + S ++++E E + + K+ + L S ++D+F
Sbjct: 108 LHDDINKVQVKPKP---------SYSDDEEIEKLSDERKARHAWNKYLLRDNSQITDLFV 158
Query: 191 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR--TSST 247
GQLKSV++ S T PF L L I ++ + D LR F E L+G T S
Sbjct: 159 GQLKSVLQCTHCQHCSVTFDPFWDLSLPIPKKSSIDVRDCLRDFVEEEILDGDEKPTCSK 218
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
A K+ +Q L KIL+LHL RFS G + KL +V FPL L P +
Sbjct: 219 CKARRKCTKRFF-LQRLPKILVLHLKRFS-GMRYRQKLSTTVNFPLA-KLNLQEFTCPES 275
Query: 308 EGRK---YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAY 363
G Y+L A H G GHYTA +Y W F+D+ V++I S V+ +AY
Sbjct: 276 RGSAPATYDLYAVSNHSG-TTFGGHYTAYCKYPTTGDWHCFNDSRVSSISASSVISSEAY 334
Query: 364 VLFYK 368
VLFY+
Sbjct: 335 VLFYE 339
>gi|313233845|emb|CBY10014.1| unnamed protein product [Oikopleura dioica]
Length = 1046
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 167/376 (44%), Gaps = 53/376 (14%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL------------RTRDIPKAGYP--- 59
+PRGLIN N C++N+ LQ + C P LL +L T++I + G
Sbjct: 678 VPRGLINQANSCWVNSILQTALVCDPLYHLLCKLLKYTSNSNGENQNTKEIARIGAEIKR 737
Query: 60 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 119
L FD I V G + + P + S+ Q
Sbjct: 738 MLPTCAKLAEVFD----------QIVVNKGGMAYEAKDIYGHISTLNPTI--SVG----Q 781
Query: 120 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT-- 177
+DA+E LS +++ MHDE++ L+ ++ IN + V+ A E W+ G + AV +
Sbjct: 782 QDAEEGLSLLLNAMHDEIVALK-KAAGINTKASQAVTSAGEG-WQVSGRQRAFAVATSAT 839
Query: 178 -QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIY------SEAVHTIEDA 229
+F + +S F G +S +K +++ T +PF L +++ SE +IE+
Sbjct: 840 GSAFDETPISAGFRGISQSSIKLPSHQSPPPTEEPFFTLKVEVPPPPMPGSEKAISIEEC 899
Query: 230 LRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG--STKLHK 287
LRL E L+ YR TG + VTA + V + L LILH+ RF + + K+ +
Sbjct: 900 LRLTPKEETLDEYRL-KTGQS--VTATRKVSLAALPPFLILHMKRFQFNPRTLEVKKIDR 956
Query: 288 SV----RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLH 343
V R ++ L L + G YEL V HHG GHYTA+ + +W
Sbjct: 957 KVTVKERITIEPYLQSPALREQTRGGVDYELRGMVLHHGISAEGGHYTAEVKR-GTKWYR 1015
Query: 344 FDDASVTAIGTSKVLH 359
DD V+ + S+VLH
Sbjct: 1016 IDDNRVSEMKLSEVLH 1031
>gi|323305299|gb|EGA59046.1| Ubp3p [Saccharomyces cerevisiae FostersB]
Length = 497
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 172/404 (42%), Gaps = 97/404 (24%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 83 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 142
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 143 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 202
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 203 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 262
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 263 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 322
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 323 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 382
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 383 PF--KSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 438
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHH 321
+ K +++ +L++ + + T + R+Y+L + H
Sbjct: 439 IRKKIKYXHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHQ 482
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 166/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARPKP---SPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 550 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 608
Query: 367 YK 368
Y+
Sbjct: 609 YE 610
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 166/386 (43%), Gaps = 65/386 (16%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K L GL N GN CF+NA LQ+L + F +Q+L P+L + S
Sbjct: 147 KRLRRSGLRNLGNTCFMNAVLQSLSNIQTFCGYIQQL----------PSLEQKM---SKK 193
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR--PR-----QEDAQE 124
+ ++ ++ V++ R ++++ +P+ S+ + PR Q+DA E
Sbjct: 194 KITTRSCTEGNDVFVVEELRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHE 253
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
F+ +++D++H EL+ L + ++ N+ V P KS+V
Sbjct: 254 FMRYLLDRLHTELMTLIPYNATVR-PNSPYVG----------SPLGKSSV---------- 292
Query: 185 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS------------EAVHTIEDALR 231
++ IFGG L+S V S PFL + LDI S E V + D L
Sbjct: 293 VTAIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSKFTCKTPNPKNGEIVCDLSDCLS 352
Query: 232 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
F+ E LE N + K I+ L +L LHL RF + + K+ +
Sbjct: 353 SFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLCLHLKRFRWSTYLRVKVDTHIN 412
Query: 291 FPLQLVLGRDLLVTPSAEGR---------KYELVATVTHHGRDPSKGHYTADARYFNDQW 341
FPL+ + ++ E R KY+L A V HHG GHYT+ A + W
Sbjct: 413 FPLRGLEMNHFMLDNLHETRNSSASGSQSKYDLAAVVVHHGSGAGSGHYTSYAVH-EGGW 471
Query: 342 LHFDDASVTAIGTSKVLHDQAYVLFY 367
HF+D+SVT V +AY+LFY
Sbjct: 472 YHFNDSSVTQCDEETVAKCKAYILFY 497
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARPKP---SPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 550 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 608
Query: 367 YK 368
Y+
Sbjct: 609 YE 610
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 166/387 (42%), Gaps = 88/387 (22%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAGYPTLTAFVGFVSDFDTP 74
GL N GN C+LNA LQ+L + PF + + R+ D K + T G
Sbjct: 142 GLKNLGNTCYLNAILQSLSNIDPFCRYFKTFRSLTDSDPRKEKHAHNTRAQG-------- 193
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR-----PR-----QEDAQE 124
N+ ++D R + E + + + PNS PR Q+DA E
Sbjct: 194 -------DNVCIVDELRKVLDGLGE--ISSSSYYSPNSFLTAICKLIPRFRGYHQQDAHE 244
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
F+ +++D++H EL +++ G K S T F S
Sbjct: 245 FMRYLLDRLHTELGRMRAP---------------------YYGNKQVSNTIVTTLFRGSL 283
Query: 185 LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE--------------AVHTIEDAL 230
L+++ + + N S FL L LDI SE ++ + D L
Sbjct: 284 LNEV------NCLVCDIN--SRKTDSFLDLSLDIPSEFISRRNKSIGDNDISICKLTDCL 335
Query: 231 RLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
F+ E LE Y SS + T K ++I+TL ++L LHL RF + S KL
Sbjct: 336 SSFTELEKLEDSELYYCSSCTKKQLST--KQLRIKTLPRVLCLHLKRFRWSSCIRKKLDI 393
Query: 288 SVRFPLQLVLGRD----LLVTPSAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQWL 342
V FP+ +G D L + ++ GR Y+L+A V HHG GHYTA A + D W
Sbjct: 394 YVEFPM---IGLDMKPYLTLKQTSNGRSMYDLIAVVEHHGSGYGSGHYTAYA--YKDGWY 448
Query: 343 HFDDASVTAIGTSKVLHDQAYVLFYKQ 369
HF+D++V+ V+ +AY+LFY Q
Sbjct: 449 HFNDSTVSVAMEEHVIKCKAYILFYVQ 475
>gi|387019607|gb|AFJ51921.1| Ubiquitin carboxyl-terminal hydrolase 21 [Crotalus adamanteus]
Length = 629
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 155/362 (42%), Gaps = 34/362 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+NA LQ L S P R T ++D
Sbjct: 282 GLRNLGNTCFMNAVLQCLSSTKPLRDYCLRREFRQEQPCTLRTQQELTEALADV------ 335
Query: 78 SSKKKNISVL---DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
I+ L D +PS F++V + + P S +G Q+DAQEFL F+MD++H
Sbjct: 336 ------IATLWHPDTSEAANPSRFKSVFQKYVP----SFTGY-SQQDAQEFLKFLMDRLH 384
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
E+ + +G + ++ S+ E+ E + + R S + D+F GQLK
Sbjct: 385 VEINR-KGRKSPCILSDAKWPSVLEDSETLSDDEQANQMWKRYLEREDSKIVDLFVGQLK 443
Query: 195 SVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
S +K Q S T + F L L I ++ ++ D LF+ E L+
Sbjct: 444 SCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLLDCFNLFTKEEELDSENAPVCDK 503
Query: 250 AGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
T + K + IQ +IL+LHL RFS K V FPLQ L + A
Sbjct: 504 CRQRTRSTKKLTIQRFPRILVLHLNRFSTTRYSIKKCSVYVDFPLQ-QLNLKEFASEKAG 562
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQ--WLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + DQ W F+D+ V+ I +++ + YVLF
Sbjct: 563 TPVYNLYALCNHSG-SVHYGHYTA---FCKDQSGWRVFNDSRVSPISENQIPSSEGYVLF 618
Query: 367 YK 368
Y+
Sbjct: 619 YE 620
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 352
Query: 367 YK 368
Y+
Sbjct: 353 YE 354
>gi|449268039|gb|EMC78912.1| Ubiquitin carboxyl-terminal hydrolase 8 [Columba livia]
Length = 1110
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 159/357 (44%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + L DI ++ F+G + G
Sbjct: 770 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNLYQDDINRSN------FLGHKGEVAEEFG 823
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 824 VIMK-----ALWTGQYKYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 873
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W N+S + +F GQ
Sbjct: 874 EDLNKADNRKRYKEENNDHLDDLRAAELAWHKHKQLNESIIVA-----------LFQGQF 922
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T+++ LRLFS E L + R +
Sbjct: 923 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEKLTDNNRFYCSHCKT 982
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 983 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLETLDLSQYVIGPKNNLKR 1042
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + + Q W FDD V+ I S V AY+LFY
Sbjct: 1043 YNLFSVSNHYG-GLDGGHYTAYCKNASKQRWFKFDDHEVSEISASSVKSSAAYILFY 1098
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 149/362 (41%), Gaps = 62/362 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN CFLNA LQ L Q LL + TR G L V + S
Sbjct: 203 GLVNMGNTCFLNAVLQCLTYTPALAQFLLSDDCTRMSRNKGPDALHNLATHVRRALSSSA 262
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
G S V S + K F RQEDA EF+ F+++ +
Sbjct: 263 GPSITPQAIV---------SKLRTIYKRFRLG---------RQEDAHEFMRFLIEALQ-- 302
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+A+ ++ + DE +S T S + IFGG L+S
Sbjct: 303 --------------KSAVSTVGQLDE--------RSKTT-------SVIHGIFGGYLRSQ 333
Query: 197 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGV 252
V+ K S T PFL L L+I T++ ALR F +PE L YR G
Sbjct: 334 VRCLSCKYESNTYDPFLDLSLEIGK--CQTLDKALRHFFSPEKLLRENQYRCD--GCRKY 389
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA----E 308
V A K L +L + L RFS+ S +K+ + V++P L + + T A
Sbjct: 390 VDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDMAPYVNKTQQASMTDR 449
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
G +Y L A + H G GHY R N+ W DDA V+ +V+ QAY+LFY
Sbjct: 450 GTRYRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQEVMRQQAYILFYT 509
Query: 369 QV 370
++
Sbjct: 510 RI 511
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 160/364 (43%), Gaps = 71/364 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDT 73
GL N GN C++N+ +Q+L+ P F L Q+L G P + AF V + F
Sbjct: 201 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNV-AFDAVAAMQTFAK 259
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP----RQEDAQEFLSFI 129
S SK N +P F LK F RP RQEDA E+L F+
Sbjct: 260 GSLMGSKPTN----------APRDFNRNLKAF---------ARPLRQGRQEDAHEYLRFL 300
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
++ + L + A SL +D R SF+ IF
Sbjct: 301 LEALQQGCL------------SRASKSLKPDDP------------IRATSFV----QKIF 332
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S V + S T PF+ L LD+ + ++++ DA R F A + L G Y+
Sbjct: 333 GGKLRSRVTCHKCGHNSDTFDPFMDLSLDV-RKGINSLTDAFRAFVAKDQLTGSEKYKCD 391
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVT 304
V A K I+T L +HL RFS +G K+ + V F +L + L V
Sbjct: 392 KCKRK--VDATKQFTIETAPPALTVHLKRFSPFGG----KISRQVAFDEKLNIAPYLSVN 445
Query: 305 PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AY 363
+Y+L A V H+G P+ GHY A R +W DD+ V+ +G+S L DQ AY
Sbjct: 446 HGPV--RYKLYAVVHHYGSGPNSGHYVASVRSPFGKWTRMDDSHVSEMGSSGPLGDQSAY 503
Query: 364 VLFY 367
+LFY
Sbjct: 504 ILFY 507
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|62027426|gb|AAH92078.1| Usp8 protein, partial [Mus musculus]
Length = 419
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 79 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 132
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 133 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 182
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 183 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 231
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 232 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 291
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 292 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 352 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 407
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 352
Query: 367 YK 368
Y+
Sbjct: 353 YE 354
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 147/365 (40%), Gaps = 77/365 (21%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P + L+ + + + K+ G+ + A G V + G
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVKNALQSWG 62
Query: 77 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
+ N S I R F P RQEDA EFL ++M
Sbjct: 63 KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101
Query: 131 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
+ + + L + T + S +E + L IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130
Query: 191 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 246
G+L+S VK + S TV PFL L LDI ++ AL F+A E L+G Y
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP- 305
V A K I+T +L + RFS K+ K V F GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITPF 240
Query: 306 ---SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
+ +G Y+L + H G GHY R +D W DD+ V + VL+ +A
Sbjct: 241 MSNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKA 300
Query: 363 YVLFY 367
Y+LFY
Sbjct: 301 YILFY 305
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRT-RDIPKAGYPT---LTAFVGFVSDFDT 73
GL N GN CF+N+ LQ L + +P + E R +DI K+ ++ + +
Sbjct: 161 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRYLKDINKSSSMNGMLFRSYADLMKEIWD 220
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P +S SPS F++ ++ F P Q+D+QEFL ++++ +
Sbjct: 221 PDMANSST------------SPSRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGL 263
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 190
H E+ ++Q + + E E P N+ A + +L S + D+F
Sbjct: 264 HMEVNRVQKRP----------IPTKPDYEAEDRLPDNEKANLYWRRYLSMDNSEIVDLFV 313
Query: 191 GQLKSVVK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTG 248
GQL S ++ A + S T PF L L I + I D L LF++ E L+G R +
Sbjct: 314 GQLMSTLECADCSFKSTTFDPFWDLSLPIPKKPNVNILDCLNLFTSKEELDGDERAICSR 373
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRDLLVTPSA 307
KS IQ +IL+LHL RFS G + +K+ V +PL+ L L + +
Sbjct: 374 CKTRRRCTKSFSIQKFPQILVLHLKRFS-GERFRSKMSVMVDYPLRNLDLIEFATSSCTQ 432
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
+ +Y+L A H G GHYTA + W F+D+ V I + + + YVLF
Sbjct: 433 KSAQYKLYAVSNHSG-SVYTGHYTASCLNPYTGDWHSFNDSHVHLISENSAISSEGYVLF 491
Query: 367 Y 367
Y
Sbjct: 492 Y 492
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 30 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 80
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 81 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 131
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 132 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 181
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 182 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 239
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 240 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 298
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 299 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 357
Query: 367 YK 368
Y+
Sbjct: 358 YE 359
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 146/356 (41%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + ++ AG+ L A VS
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ GR +P + L+ + + N+ RQEDA E++ +++ MH
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L L S S + +LV IFGG+L+S
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 253
VK Q + S PFL L LDI +I A + F+ PE L+G + V
Sbjct: 233 VKCMQCSXCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGXRQYQCQQCKQKV 290
Query: 254 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-K 311
A K + +L +HL RF SY + K+HK + F L L V+ S +G K
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHFGPTLDLAP--FVSGSYDGDLK 346
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + HHG GHY R + W DD V+ +G V QAY+LFY
Sbjct: 347 YTLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFY 402
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 147/365 (40%), Gaps = 77/365 (21%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P + L+ + + + K+ G+ + A G V + G
Sbjct: 3 GLTNLGNTCFLNSVLQCLTYTQPLAEFLKSGQHKLLCKSSGFCAMCALEGHVRNALQSWG 62
Query: 77 G------SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
+ N S I R F P RQEDA EFL ++M
Sbjct: 63 KVIAPNHMISRVNYSNAGISRAFQPW---------------------RQEDAHEFLRYLM 101
Query: 131 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
+ + + L + T + S +E + L IFG
Sbjct: 102 EALQKDCLP----------SKTPMNSPEQE---------------------KTLLYKIFG 130
Query: 191 GQLKSVVKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 246
G+L+S VK + S TV PFL L LDI ++ AL F+A E L+G Y
Sbjct: 131 GRLRSQVKCSNCLERSETVDPFLDLSLDI--TRADSLGKALAWFTANEILDGDNKYHCEK 188
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP- 305
V A K I+T +L + RFS K+ K V F GR L +TP
Sbjct: 189 CKKK--VRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHF------GRKLDITPF 240
Query: 306 ---SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
+ +G Y+L + H G GHY R +D W DD+ V + VL+ +A
Sbjct: 241 MSNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKA 300
Query: 363 YVLFY 367
Y+LFY
Sbjct: 301 YILFY 305
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 11 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 62 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 279
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 280 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 338
Query: 367 YK 368
Y+
Sbjct: 339 YE 340
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 161 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 149/362 (41%), Gaps = 63/362 (17%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
K+V ++ GL N GN CFLN+ +Q P V+ L L + P G+ F
Sbjct: 146 KAVPLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGL--LLSCHSPNDGHNGFCVICAF- 202
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ S+ GR SP +F LK F+ D R +QEDA EF+
Sbjct: 203 ----------RYQMKQSLESTGRVISPVVFVDNLKQFSSDF-----RRHQQEDAHEFMQC 247
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+D++ S EED + +
Sbjct: 248 ALDKLE------------------TCFSNFEED---------------------NIAKKV 268
Query: 189 FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
FGG L S ++ +++S T + + L L+I E V +I AL F+ EN++
Sbjct: 269 FGGSLVSKLRCCNCSRSSITNEQLIDLSLEI--ENVDSISSALESFTMVENIDAKLKCEG 326
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
N V K+ + QT S I HL RF + G+ K+ K + FPL+L L ++ S
Sbjct: 327 CNEEVSVEKQLMLDQTPS-IAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNES 385
Query: 307 AEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
KY+L A V H+G GHY R D W DD+ VT + VL +AY+L
Sbjct: 386 DNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLSQEAYIL 445
Query: 366 FY 367
FY
Sbjct: 446 FY 447
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 151/356 (42%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 75
GL N GN C++NATLQ L P +L + ++ +G+ L A F+ +P
Sbjct: 57 GLQNMGNTCYMNATLQCLTYTPPLANYMLSQAHSQTCRPSGFCMLCAVETHFLWALHSPG 116
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P +A+ F R RQEDA EFL F +D
Sbjct: 117 ------------DVIQPC-----QALAAAFH---------RNRQEDAHEFLVFTVD---- 146
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
LK G +N VGPK +++ IFGG KS
Sbjct: 147 -ALKAAGLPGLMN----------------VVGPKEDKSLSH----------QIFGGYWKS 179
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
+K Q S T+ P+L + LDI + +++ AL PE L+G G T
Sbjct: 180 QIKCLQCQGVSDTLDPYLDIALDI--KTADSVQQALEQLVKPEELDGENAYECGICLKKT 237
Query: 255 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K++ +Q+ +LI L RFS + K+ + V++P L + R + S +Y
Sbjct: 238 AASKTLVLQSSGNVLIFVLKRFSDFT--GEKIARQVQYPECLDM-RPYMSQQSGRPLEYV 294
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G KGHY + N W DDA VTA + VL+ AYVLFY Q
Sbjct: 295 LYAALVHVGLRCQKGHYFCYVKAGNGHWYKMDDAKVTACDITSVLNQSAYVLFYVQ 350
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/365 (29%), Positives = 156/365 (42%), Gaps = 76/365 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD------IPKAGYPTLTAFVGFVSDF 71
GL N GN CFLNATLQ + P L +LR+ D K G+ + A V +
Sbjct: 45 GLSNMGNTCFLNATLQCITHTVP---LFLKLRSTDHSTPCSYNKDGFCSFCALKEHVDE- 100
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDV-PNSISGRPRQEDAQEFLSFIM 130
S+ G +P+ F L+ + D P +QEDA EFL ++
Sbjct: 101 -------------SIQRSGSVIAPAKFRDNLRKLSSDFWPG------QQEDAHEFLRCLL 141
Query: 131 DQMH----DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
D +H D + K +G S EE S ++
Sbjct: 142 DNLHKCTLDPMSKGKGSS------------FDEE----------------------SIVN 167
Query: 187 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGY 242
+IFGGQLKS + + +S T +PFL L L+I + V + DAL+ F+ E + E
Sbjct: 168 EIFGGQLKSHLSCCECGHSSETFEPFLDLSLEI--DQVDHLVDALQSFTKVEQIGDSENK 225
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 302
T + NA V + K + + ++ HL RF+ K+ K V +PL++ L
Sbjct: 226 LTCESCNAQV-SKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLEVDLKPFHS 284
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
+ G KY+L V H G P+ GHYT R W +D+ V + S L+ +A
Sbjct: 285 NPDTVGGLKYDLYGVVEHSGL-PNYGHYTCTIRSSPSTWYFMNDSKVDSCTDSSALNQEA 343
Query: 363 YVLFY 367
Y+LFY
Sbjct: 344 YILFY 348
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 58 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 108
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 109 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 159
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 160 HNEVNRVTVRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 209
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 210 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCC 267
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 268 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 326
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 327 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 385
Query: 367 YK 368
Y+
Sbjct: 386 YE 387
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLTDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 164/376 (43%), Gaps = 75/376 (19%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 69
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFR---------KTLCALWQ--- 193
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
GS FSP S+F V K +PN G +Q+DA EF+ +
Sbjct: 194 -------GSQT-----------AFSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRY 229
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D +H L+LQG NG + + + L E+ T+ NK + + + + I
Sbjct: 230 LLDHLH---LELQG---GFNGVSRSAI-LQEKS---TLSASNKCCINGASTVVTA----I 275
Query: 189 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSA 235
FGG L++ V S PFL L LDI S+ V ++ D LR F+
Sbjct: 276 FGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTD 335
Query: 236 PENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 294
E L E + K IQ L K L LHL RF + + K+ V+FPL+
Sbjct: 336 LEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRNKVDTYVQFPLR 395
Query: 295 LVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 351
+ + L+ P G Y+L A V HHG GHYTA A + +W HF+D++VT
Sbjct: 396 GLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGRWFHFNDSTVTV 454
Query: 352 IGTSKVLHDQAYVLFY 367
V +AY+LFY
Sbjct: 455 TDEETVGKAKAYILFY 470
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFV--GFVSDFDTPS 75
GL N GN CF+N+ +Q L + +LL++ RD K T+ + ++ F
Sbjct: 72 GLRNLGNTCFMNSVIQCLSN----TRLLRDYCRRDEHKDEVNKTTSNMKGALINAFANL- 126
Query: 76 GGSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ + G P SP+ F++ + F Q+DAQEFL ++++
Sbjct: 127 --------MHSIWKGAPDTHVSPNDFKSQIARFAKRFVGY-----NQQDAQEFLMYLLEG 173
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+H+++ +++ + + + +ED+ +TV + + Q+ S + DIF GQ
Sbjct: 174 LHEDVNRVKEKRKN---------RIYDEDDSKTVSAQEMWKMYLHQN--DSKIVDIFVGQ 222
Query: 193 LKSVVKAQG-NKASATVQPFLLLHLDI-----YSEAVHTIEDALRLFSAPENLEG-YRTS 245
LKS + G S T PF L L I Y V ++E LF++ E L+G +
Sbjct: 223 LKSSLTCTGCGHVSDTFDPFWDLSLPIKKGHGYGNDV-SLESCFELFTSEEVLDGDEKPM 281
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
+ KS IQ K+LI+HL RF+ S +KL V FPLQ +
Sbjct: 282 CSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRSKLSTMVNFPLQSLELNQFAAEK 341
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L A H G P GHYTA ++ W HF D V+ I S+V +AYV
Sbjct: 342 NGAPAMYNLFAVSNHSG-TPFGGHYTAYTKHPETSTWHHFSDTRVSQISESQVQSSEAYV 400
Query: 365 LFYKQV 370
LFY+ V
Sbjct: 401 LFYELV 406
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 160/384 (41%), Gaps = 67/384 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLL-----QELRTRDIPKAGYPTLTAFV--GFV 68
P+G +N GN CFLN+T+Q L PF Q L E + + K F+
Sbjct: 242 PKGFVNLGNTCFLNSTVQCLAYLPPFCQSLLSILSHESKHGEKRKTSQGRKVTFILRSLF 301
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRP-RQEDAQEFL 126
S GG++ G +P ++ +AV + RP RQEDA EFL
Sbjct: 302 SQVHGIDGGTTHS--------GSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEFL 353
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
++D M+D LK G + + +G W P + T + +
Sbjct: 354 VHLLDAMNDGELKEAGINQNASG-------------WRDRLPIPRLDET-------TFIH 393
Query: 187 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RT 244
IFGG +S V+ N S T P L L L++ +A +++ AL F+ E L+ +
Sbjct: 394 RIFGGYFRSQVRCTSCNNRSNTYDPLLNLSLEVSRKACNSVAQALHEFTRKETLDSQNQW 453
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--------------GSTKLHKSVR 290
+G V A K + + L + L RF+Y + G K+ KS+
Sbjct: 454 KCSGCKKYVCATKQLTVFRPPLSLCIQLKRFTYSGRLKFSVGFGSFGNGGGGQKISKSIE 513
Query: 291 FPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARY----FNDQWLHF 344
FP QL L P ++GR Y L V H G S GHYTA R QW H
Sbjct: 514 FPAQLKL-------PLSDGRSCGYSLTGIVIHVGGSASSGHYTAYVRKPGGGSKSQWFHM 566
Query: 345 DDASVTAIGTSKVLHDQ-AYVLFY 367
DD+ V A+ VL + AY+LFY
Sbjct: 567 DDSFVEAVSEQTVLRQRDAYLLFY 590
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 165/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 161 HNEVNRVAARP---KPSPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 328 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|410912832|ref|XP_003969893.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Takifugu
rubripes]
Length = 1082
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 155/370 (41%), Gaps = 61/370 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG---FVSDFDTP 74
GL N GN C++N+ LQ L + P LT + ++ D +
Sbjct: 751 GLRNLGNTCYMNSVLQCLCNA--------------------PALTEYFNNNYYMDDIN-- 788
Query: 75 SGGSSKKKNI--SVLDIGRPFS---PSMFEAVLKNFTP--------DVPNSISGRPRQED 121
+ NI D+ F +++ + K +P + SG Q+D
Sbjct: 789 ------RSNILGHKGDVAEEFGVIMKALWSGLYKCISPRDFKITIGKINEQFSGY-EQQD 841
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED-EWETVGPKNKSAVTRTQSF 180
+QE L F+MD +H++L K N L D W N+S +
Sbjct: 842 SQELLLFLMDGLHEDLNKADNRKRYKEEENDHLDDQTAADVAWRKHKLLNESIIVA---- 897
Query: 181 LPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
+F GQ KS V+ ++ S T + F+ L L + S + +++D LRLFS E L
Sbjct: 898 -------LFQGQFKSTVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKL 950
Query: 240 -EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
+ + + K ++I + IL++HL RFSY + KL SV FPL +
Sbjct: 951 TDNNKVFCRHCKAHRDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDSLDL 1010
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKV 357
++ P ++Y L A H+G GHYTA + +W FDD V+ I TS V
Sbjct: 1011 AQYVIGPKQSLKRYSLYAVSNHYG-GLDGGHYTAYCKSALKQRWYKFDDHEVSDISTSSV 1069
Query: 358 LHDQAYVLFY 367
AY+LFY
Sbjct: 1070 KSSAAYILFY 1079
>gi|348561662|ref|XP_003466631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Cavia
porcellus]
Length = 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 167/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314
Query: 134 HDELLKLQGESTSI--NGANTALV----SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I NG +L +L EE E N K + R S
Sbjct: 315 HLEINRRGRRAPPILANGPVPSLPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 430
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRLS 489
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|297787764|pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
gi|297787766|pdb|3MTN|C Chain C, Usp21 In Complex With A Ubiquitin-based, Usp21-specific
Inhibitor
Length = 373
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 123/383 (32%), Positives = 170/383 (44%), Gaps = 57/383 (14%)
Query: 14 LLPRG------LINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-A 63
L+PRG L N GN CFLNA LQ L S P L ++ R +++P G LT A
Sbjct: 14 LVPRGSSGHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEA 72
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
F + P D +P+ F AV + + P S SG Q+DAQ
Sbjct: 73 FADVIGALWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQ 114
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSA 173
EFL +M+++H E+ + +G AN + S L EE E N K
Sbjct: 115 EFLKLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRY 173
Query: 174 VTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIED 228
+ R S + D+F GQLKS +K Q S T + F L L I ++ ++ D
Sbjct: 174 LERED----SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRD 229
Query: 229 ALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK 287
LF+ E LE T + K + +Q +IL+LHL RFS S+GS K
Sbjct: 230 CFNLFTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSS 288
Query: 288 -SVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 345
V FPLQ L LG + A Y+L A H G GHYTA R W ++
Sbjct: 289 VGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYN 344
Query: 346 DASVTAIGTSKVLHDQAYVLFYK 368
D+ V+ + ++V + YVLFY+
Sbjct: 345 DSRVSPVSENQVASSEGYVLFYQ 367
>gi|410986643|ref|XP_003999619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Felis catus]
gi|410986645|ref|XP_003999620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Felis catus]
gi|410986647|ref|XP_003999621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Felis catus]
Length = 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 165/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 214 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 272
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 273 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 314
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + A +L EE E N K + R S
Sbjct: 315 HLEINRRGRRAAPILASGAAASQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 370
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 371 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 430
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 431 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 489
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 490 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 545
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 546 VASSEGYVLFYQ 557
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NVHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 158/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 37 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 87
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 88 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 138
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 139 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 188
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + +TV PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 189 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDAAPTCC 246
Query: 249 NAGVVTAK-KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 247 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 305
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 306 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 364
Query: 367 YK 368
Y+
Sbjct: 365 YE 366
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHGS----SVHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRV----TVRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|374073975|pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
gi|374073977|pdb|2Y5B|E Chain E, Structure Of Usp21 In Complex With Linear
Diubiquitin-Aldehyde
Length = 370
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 18 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 76
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 77 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 118
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 119 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 173
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 174 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 233
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 234 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 292
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 293 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 348
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 349 QVASSEGYVLFYQ 361
>gi|254575047|pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575048|pdb|3I3T|C Chain C, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575049|pdb|3I3T|E Chain E, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
gi|254575050|pdb|3I3T|G Chain G, Crystal Structure Of Covalent Ubiquitin-usp21 Complex
Length = 355
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 5 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 63
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 64 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 105
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 106 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 160
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 161 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 220
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 221 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 279
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 280 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 335
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 336 QVASSEGYVLFYQ 348
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARPKP---SPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 550 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFF 608
Query: 367 YK 368
Y+
Sbjct: 609 YE 610
>gi|345797847|ref|XP_536136.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Canis lupus
familiaris]
Length = 565
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPAQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 145/354 (40%), Gaps = 62/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C+ NA LQ L +P + L L R P +
Sbjct: 45 GLRNLGNTCYANAALQCLTYTAPLARCL--LSRRHAEACQRPASCVLCAMRAHV------ 96
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
++ + G P+ ++ F R +QEDA EFL F +D M
Sbjct: 97 -ARARRCR----GEVIQPAT--GLIAGFH---------RHKQEDAHEFLMFTVDAMQQAC 140
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ E E G + + + + IFGG +S V
Sbjct: 141 LR----------------------EPERRGRRCGDS---------TPIRRIFGGYWRSQV 169
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTA 255
K + + S T+ P+L + LDI +A ++ AL L PE L+G + G V A
Sbjct: 170 KCLRCHGVSDTLDPYLDITLDI--QAAQSVTQALELLVKPEKLDGDNSYHCGVCLEKVPA 227
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELV 315
K++ + S++LIL L RFS + +KL K V++P L + R L A +YEL
Sbjct: 228 SKTLTLHAPSEVLILVLKRFSDFT--GSKLAKEVQYPEHLDM-RQYLSQQDAGPLEYELY 284
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + N QW DDA VTA S L AYVLFY Q
Sbjct: 285 AVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDAKVTACDVSSALSQDAYVLFYIQ 338
>gi|299689340|pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8
Specific Inhibitor
Length = 396
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 64 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 118 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 167
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 217 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 336
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 337 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 155/367 (42%), Gaps = 77/367 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDI--------PKAGYPTLTAFVGF 67
GL N GN C++N+ +QAL+ P F L QEL D+ P A + +TA F
Sbjct: 196 GLSNYGNTCYMNSVMQALVHTPPLAFALLTQEL---DVLHGEWGGKPNAAFDAVTAMHSF 252
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
L RP +P F LK F + RQEDA E+L
Sbjct: 253 AK---------------RSLQGTRPTNAPQEFNRNLKAFAKPLRQG-----RQEDAHEYL 292
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
F+++ + L A SL +D R +F+
Sbjct: 293 RFLLEALQQSCLA------------RAPKSLKPDDP------------ARRTTFV----H 324
Query: 187 DIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---Y 242
FGG+L+S V S T PF+ L LD+ + ++++ DALR F A ++L G Y
Sbjct: 325 KTFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDV-RKGINSLTDALRAFVAKDHLTGAEKY 383
Query: 243 RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDL 301
+ V A K I L +HL RF+ +G K+ + + F L + L
Sbjct: 384 KCDKCKRK--VDATKQFTIDAAPPALTVHLKRFTVFGG----KVSRQIAFDDMLNIAPYL 437
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
V +Y L ATV H+G P+ GHY A R + +W+ DD+ V +G S +DQ
Sbjct: 438 SVNNGPA--RYRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHVAEMGRSGPTNDQ 495
Query: 362 -AYVLFY 367
AY+LFY
Sbjct: 496 SAYILFY 502
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHSS----NAHTALMEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 150/357 (42%), Gaps = 63/357 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 99 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVAGFCALCAIQNHVSR------ 152
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ GR +P L+ + + N+ RQEDA E++ +++ MH
Sbjct: 153 --------ALQSTGRILAPEDLVGNLRCISRNFRNA-----RQEDAHEYMVNLLECMHKC 199
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + + S E+ G KS V + IFGG+L+S
Sbjct: 200 CLP------------SGIPS-------ESPGAYEKSFVHK-----------IFGGRLRSQ 229
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L L+I+ +++ AL F+A E L+G Y
Sbjct: 230 VKCHQCSYCSNKFDPFLDLSLEIFK--ADSLQKALSNFTAAEWLDGGEKEYHCQRCKQK- 286
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 310
V A K + I +L +HL RF G K+ K V+F L L V+ S +G
Sbjct: 287 -VKALKQLTIHKAPYVLTIHLKRFHAHDTGQ-KIKKKVQFGCALDL--KPFVSGSNDGDV 342
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H G GHY R N+ W DD V+ + +VL+ QAY+LFY
Sbjct: 343 KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFY 399
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 150/357 (42%), Gaps = 63/357 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR-DIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + + AG+ L A VS
Sbjct: 96 GLRNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHKTSCHVAGFCALCAIQNHVSR------ 149
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ GR SP L+ + + N+ RQEDA E++ +++ MH
Sbjct: 150 --------ALQSTGRILSPEDLVGNLRCISRNFRNA-----RQEDAHEYMVNLLECMHKC 196
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + + S E+ G KS V + IFGG+L+S
Sbjct: 197 CLP------------SGIPS-------ESPGAYEKSFVHK-----------IFGGRLRSQ 226
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L L+I+ +++ AL F+A E L+G Y
Sbjct: 227 VKCHQCSYCSNKFDPFLDLSLEIFK--ADSLQKALSNFTAAEWLDGGEKEYHCQRCKQK- 283
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 310
V A K + I +L +HL RF G K+ K ++F L L V+ S +G
Sbjct: 284 -VRALKQLTIHKAPYVLTIHLKRFHAHDPGQ-KIKKKIQFGCALDL--KPFVSGSYDGDV 339
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H G GHY R N+ W DD V+ + +VL+ QAY+LFY
Sbjct: 340 KYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYMLFY 396
>gi|170572009|ref|XP_001891950.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
gi|158603235|gb|EDP39240.1| Ubiquitin carboxyl-terminal hydrolase family protein [Brugia
malayi]
Length = 731
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 187/465 (40%), Gaps = 125/465 (26%)
Query: 10 SVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG 66
S + PRGL N GN C++NA +QAL +C PF + L ++ +F
Sbjct: 26 SESQIYPRGLTGLTNLGNTCYMNAAIQALSNCPPFSDFFRSL----------DSIASFAS 75
Query: 67 FVSDFDT-PSGGSSKKKNISVL---DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
V D + P SS + + L + R +P +F A ++N P P Q+DA
Sbjct: 76 KVLDNNAEPPISSSFRCLLQALWSEERNRCINPQLFLAQIRNQYPQFRG-----PAQQDA 130
Query: 123 QEFLSFIMDQMHDEL---------------LKLQGESTSING----------ANTALVSL 157
QEF+ ++D +H EL +Q E SI+G ++++
Sbjct: 131 QEFIRCLLDILHRELRQPVFAWEYRNITRSCNIQTEEESISGFIGSRYVPSRSSSSASDD 190
Query: 158 AEEDE-----WETVGP-----------------------------KNKSAVTRTQS---- 179
E E W + G + +SAVT +S
Sbjct: 191 DERYETADSGWSSDGEVPTASKAANKHSEPITNNRLTHTSDHSVNQQESAVTGPRSRQSK 250
Query: 180 ---FLPSALSDIFGGQLKSVVKA-----------------QGNKASATVQPFLL---LHL 216
+ S ++++F G+L SVVK N+ + P+ L L
Sbjct: 251 SPIYYRSLVTEVFDGRLSSVVKCLTCHHLSETCETFQEEVDNNENVSWQWPWWLGGSLFR 310
Query: 217 DIYSEA---VHTIEDALRLFSAPENLEGYRTSSTGNAG-VVTAKKSVKIQTLSKILILHL 272
IY + ++ DAL F P++L G S + K KI +IL +HL
Sbjct: 311 SIYHYLFGDLVSLNDALAAFFLPDDLCGENMYSCEKCSKLRNGVKICKIIDPPEILCIHL 370
Query: 273 MRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-------SAEGRKYELVATVTHHGRDP 325
RF + S K+ V FP+ DL +TP S E Y+LVA +TH+G +
Sbjct: 371 KRFRHDLSDSVKVRSKVTFPVH-----DLDLTPFIANFEKSKEPVLYDLVAFITHYGANA 425
Query: 326 SKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
GHY A + +D W FDD VT + +L +AYVLFY++
Sbjct: 426 ESGHYIAYCKNEVDDNWYEFDDNVVTRLEIGDILSKEAYVLFYQR 470
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 152/359 (42%), Gaps = 38/359 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI--PKAGYPTLTAFVGFVSDFDTP 74
GL N GN CF+N+ LQ L + LQ RD+ K + F + T
Sbjct: 47 GLRNLGNTCFMNSILQCLSNTKDLRDYCLQNSYRRDLSSKKCNTAIMEEFARLLQAIWTS 106
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
S SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 107 SANEV-------------VSPSEFKTQIQKYAPRFMGY-----NQQDAQEFLRFLLDGLH 148
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+E +N +++ + K K R S + ++F GQLK
Sbjct: 149 NE----------VNRVTVKPRPSSQDLDHMPDSEKGKHMWKRYLEREDSRIVELFVGQLK 198
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE--DALRLFSAPENLEG-YRTSSTGNA 250
S + + S PF L L I ++ + D +RLF+ + L+G + +
Sbjct: 199 SSLTCTECGYCSTVFDPFWDLSLPIAKKSASEVSLVDCMRLFTKEDVLDGDEKPTCCRCK 258
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
K IQ KIL+LHL RFS G S KL V FPL+ + R+ + S
Sbjct: 259 ARRRCTKKFTIQKFPKILVLHLKRFSEGRIRSGKLSTFVNFPLKDLDLRE-FSSESNPHA 317
Query: 311 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G GHYTA + N +W F+D+ VTA+ +++V AYVLFY+
Sbjct: 318 TYNLYAVSNHSG-TTMGGHYTAYCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFYE 375
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 162/389 (41%), Gaps = 80/389 (20%)
Query: 16 PR--GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
PR GL N GN CF+NA LQ+L + F +++L P+L V V T
Sbjct: 117 PRSSGLRNLGNTCFMNAVLQSLSNIQQFCGYIKQL----------PSLEEKVTKVKKIQT 166
Query: 74 PSGGSSK---------KKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
+ + +K + L G SP AV+ P +Q+DA
Sbjct: 167 RKSKTPEEDVLLVEELRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGY-----QQQDA 221
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
EF+ +++D++H ELL L+ D +GPK KS +
Sbjct: 222 HEFMRYLLDRLHTELL--------------TLLPYPNSDS-PFIGPKGKSTI-------- 258
Query: 183 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAV-------------HTIED 228
++ IFGG L++ V S PFL L LDI + T+ D
Sbjct: 259 --VTAIFGGLLQNEVTCLVCGVESKKHDPFLDLSLDIPQQFCTRGVKAKDGEQLRCTLSD 316
Query: 229 ALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 285
L+ F+ E LE Y S+ T K I+ L +L LH+ RF + S KL
Sbjct: 317 CLQSFTELEELEESELYMCSTCKKKQRST--KKFWIRRLPNVLCLHIKRFRWQSFFRVKL 374
Query: 286 HKSVRFPLQLVLGRDLLVTPSAEGR-------KYELVATVTHHGRDPSKGHYTADARYFN 338
V FPL+ + ++ E R +Y+L A V HHG GHYT+ AR+
Sbjct: 375 ETFVEFPLEGLNMHKYILDNLHETRGSGSGSNEYDLAAVVVHHGSGAGSGHYTSYARH-E 433
Query: 339 DQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
QW HF+D++VT V +AY+LFY
Sbjct: 434 GQWFHFNDSTVTPCEPETVAKCKAYILFY 462
>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 343
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 156/375 (41%), Gaps = 54/375 (14%)
Query: 3 AINEPVKSVKDLLP--RGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYP 59
+ E ++ L P GL N N C++NA LQ L S +P VQ L D+ +
Sbjct: 8 SFKEQLEDTSSLHPGLTGLQNLENTCYMNAVLQCLCSLTPLVQYFLSGKWNTDLHQEIGE 67
Query: 60 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGR--PFSPSMFEAVLKNFTPDVPNSISGRP 117
+ TAF VSD + +G+ SP F +V P R
Sbjct: 68 SATAFGCLVSD----------------MWLGKFDYVSPEAFHSVFGKRYPAF-----SRR 106
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
Q DAQEFL ++D +H+ +++ + +E + G +S+
Sbjct: 107 TQHDAQEFLICVLDDLHEAFKEVRAQ--------------LQERQSPAAGASTRSSSG-- 150
Query: 178 QSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
S ++ +F GQL ++ K S + F +L L I S V +++D L F P
Sbjct: 151 ----TSIITHLFEGQLSYGIRCLTCKTLSDRPESFTILSLPIPSTRVCSLQDCLECFFQP 206
Query: 237 ENLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ L R G+ T K S I +I+I HL RF++ + KL +V +P
Sbjct: 207 DTLTWNNQIRCHRCGSNQDATVKAS--ITKAPQIIIFHLKRFAWQDKHRRKLSTTVCYPF 264
Query: 294 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAI 352
+ + T +Y L A V H G D GHYTA ++ W FDD VT I
Sbjct: 265 SHLDLSPYISTSCHNTTEYSLCAVVNHAG-DLDYGHYTAFCKHSITKHWYSFDDDQVTKI 323
Query: 353 GTSKVLHDQAYVLFY 367
S V D AY+LFY
Sbjct: 324 PDSAVQADTAYLLFY 338
>gi|354471265|ref|XP_003497863.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus
griseus]
Length = 1079
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 155/360 (43%), Gaps = 35/360 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 739 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 792
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 793 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 842
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 843 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 891
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 892 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 951
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 952 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1011
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY V
Sbjct: 1012 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSV 1070
>gi|344248888|gb|EGW04992.1| Ubiquitin carboxyl-terminal hydrolase 8 [Cricetulus griseus]
Length = 1075
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 155/360 (43%), Gaps = 35/360 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 735 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 788
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 789 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 838
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 839 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 887
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 888 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 947
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 948 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1007
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY V
Sbjct: 1008 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFYTSV 1066
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 168/369 (45%), Gaps = 59/369 (15%)
Query: 28 LNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNI 84
+NA LQ+L + F +EL R+ AG T + T S G + N+
Sbjct: 1 MNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT----------YHTRSQGDN---NV 47
Query: 85 SVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRPRQEDAQEFLSFIMDQMHD 135
S+++ R ++++ F+P+ +PN G +Q+DA EF+ +++D +H
Sbjct: 48 SLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY-QQQDAHEFMRYLLDHLH- 104
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+LQG NG + + ++ +E+ T+ NK + + ++ IFGG L++
Sbjct: 105 --LELQG---GFNGVSRS--AILQENS--TLSASNKCCINGA----STVVTAIFGGILQN 151
Query: 196 VVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLFSAPENL-EG 241
V S PFL L LDI S+ V + D LR F+ E L E
Sbjct: 152 EVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCWVRDCLRSFTDLEELDET 211
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 301
+ K IQ L K+L LHL RF + + K+ V FPL+ + +
Sbjct: 212 ELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCY 271
Query: 302 LVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
L+ P G + Y+L A V HHG GHYTA A + +W HF+D++VT V+
Sbjct: 272 LLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVV 330
Query: 359 HDQAYVLFY 367
+AY+LFY
Sbjct: 331 KAKAYILFY 339
>gi|48257066|gb|AAH03130.2| USP21 protein, partial [Homo sapiens]
Length = 477
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 125 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 183
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 184 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 225
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 226 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 280
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 281 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 340
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 341 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 399
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 400 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 455
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 456 QVASSEGYVLFYQ 468
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + + +V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|301786749|ref|XP_002928787.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Ailuropoda melanoleuca]
gi|281352153|gb|EFB27737.1| hypothetical protein PANDA_018837 [Ailuropoda melanoleuca]
Length = 565
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE + N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSAAPCQPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + I + SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 110 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 161
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 193
N N V E P ++ + +L S + D+F GQL
Sbjct: 162 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASETT 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT++ +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSGTTVG-GHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|157817586|ref|NP_001099972.1| ubiquitin carboxyl-terminal hydrolase 8 [Rattus norvegicus]
gi|149023197|gb|EDL80091.1| ubiquitin specific protease 8 (predicted) [Rattus norvegicus]
Length = 1081
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 154/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 741 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 794
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 795 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 844
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 845 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 893
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 894 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 953
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P + +K
Sbjct: 954 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKSSLKK 1013
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1014 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1069
>gi|350583234|ref|XP_003481465.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Sus scrofa]
Length = 610
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 258 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 316
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 317 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 358
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 359 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 414
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 415 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 474
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 475 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 533
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 534 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 589
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 590 VASSEGYVLFYQ 601
>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
queenslandica]
Length = 1002
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 158/364 (43%), Gaps = 44/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL NS N C+LNA LQ + + + P + A+ F+ D P
Sbjct: 663 GLKNSKNSCYLNAVLQCVSHTTKLTDYFLSGEAKKEPGYSSKIIGAYNSFLKDMWMP--- 719
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
K+ +VL P A L TP + I QEDAQEFL +++ +HD +
Sbjct: 720 --KENTKAVL-------PRRIRAAL---TPSI--DILQENGQEDAQEFLQYLLPCLHDHI 765
Query: 138 LK--LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
K L T N L+S+ V + F+ S S++F GQ KS
Sbjct: 766 NKPPLDSPRTKALKRNNGLISITP-------------PVPISSEFMKSCFSELFMGQTKS 812
Query: 196 VVKA-QGNKASATVQPFLLLHLDI-----YSEAVH-TIEDALRLFSAPENLEGYRTSSTG 248
+ + ++ S++V+ F L L + +S+ V T+ D RLF+A E L
Sbjct: 813 SLTCHKCSRTSSSVESFWNLSLPLPTKGLFSKYVSFTLSDCFRLFAAEEKLIKENRPRCS 872
Query: 249 NAGVVTA-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G + K +++Q + ILHL RFS+ KL +V+ P L + SA
Sbjct: 873 KCGTLQNFSKKLEVQKFPESFILHLKRFSFQDGHLVKLTSAVKVPTTLSVKEIAADKESA 932
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL--HDQAYVL 365
+ YEL V HH GHY AD ++ N +W +F+D V+ T+++ Y+L
Sbjct: 933 KSFYYELYG-VIHHSGYLDGGHYQADCKH-NGKWYNFNDDIVSKKSTAEITVPSSSPYLL 990
Query: 366 FYKQ 369
FY++
Sbjct: 991 FYEK 994
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 166/371 (44%), Gaps = 45/371 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 71
GL N GN CFLN++LQ L + P E+ ++ G TA+ + +
Sbjct: 4 GLRNLGNTCFLNSSLQCLSATIPLTDYFLGYDYRSEINQHNVLGTGGKLATAYAELMKEL 63
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ S IS R P+ F++ L++F P + Q DAQE LSF++D
Sbjct: 64 WLQAAPVSGYTKIS----ARVVKPTRFKSSLESFAPQFLGT-----SQHDAQELLSFLLD 114
Query: 132 QMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
+H++L ++ E +G + ++ + W+ ++KS V D
Sbjct: 115 GIHEDLNRIPKKPYIEDRDCDGTHDERDAI---EAWKNYLRRDKSLVV-----------D 160
Query: 188 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRT 244
IF GQL++ + + +PF+ L L + ++ HT++D LRL+ A E L E
Sbjct: 161 IFQGQLRNTLTCLTCRHVNVRFEPFMYLSLPLNDDS-HTLDDCLRLYLAEERLVRENQWY 219
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG--STKLHKSVRFPLQLVLG-RDL 301
S KK+ + + ILI+HL RF + G +K + +R+P+ +
Sbjct: 220 CSVCQTHRDATKKT-DLWIVPAILIVHLKRFKFNEYGQLGSKNNACIRYPVGDSWDLSGV 278
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHD 360
+ + +E Y+L A H G D GHYTA + F+D W F+D + I + +
Sbjct: 279 VCSRGSEEPLYDLYAVSNHVG-DLGGGHYTAYSLNRFDDHWYEFNDTTCRKIDDRTLQGN 337
Query: 361 --QAYVLFYKQ 369
AY+LFY +
Sbjct: 338 SSSAYLLFYNR 348
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 162/367 (44%), Gaps = 53/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 190
H+E+ N V E P ++ + +L S + D+F
Sbjct: 161 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 207
Query: 191 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTS 245
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 208 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 265
Query: 246 STGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 302
+ K+ +K +Q KIL+LHL RFS ++KL V FPL+ + R+
Sbjct: 266 TCYRCRA--RKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-F 322
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQ 361
+ + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 323 ASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSD 381
Query: 362 AYVLFYK 368
AY+LFY+
Sbjct: 382 AYLLFYE 388
>gi|355728146|gb|AES09431.1| ubiquitin specific peptidase 8 [Mustela putorius furo]
Length = 487
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 147 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 200
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 201 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLMDGLH 250
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 251 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 299
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 300 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 359
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 360 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 419
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 420 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 475
>gi|20071587|gb|AAH27052.1| Usp8 protein, partial [Mus musculus]
Length = 673
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 155/358 (43%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI ++ L G V++ F
Sbjct: 333 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN---LLGHKGEVAEEFGII- 388
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L G R SP F+ + S Q+D+QE L F+MD +
Sbjct: 389 --------MKALWTGQYRYISPKDFKVTIGKINDQFAGSS-----QQDSQELLLFLMDGL 435
Query: 134 HDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
H++L K N L L A E W+ N+S + +F GQ
Sbjct: 436 HEDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQ 484
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNA 250
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 485 FKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCR 544
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +
Sbjct: 545 ARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLK 604
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 605 KYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 661
>gi|194036892|ref|XP_001927817.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Sus
scrofa]
Length = 565
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|355727944|gb|AES09362.1| ubiquitin specific peptidase 21 [Mustela putorius furo]
Length = 592
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 341 HLEINRRGRRAPPILASSPAPSQPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 396
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 397 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 456
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 457 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 515
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 516 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 571
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 572 VASSEGYVLFYQ 583
>gi|60552608|gb|AAH90946.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|148696217|gb|EDL28164.1| ubiquitin specific peptidase 8, isoform CRA_b [Mus musculus]
Length = 1119
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 779 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 832
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 833 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 882
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 883 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 931
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 932 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 991
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 992 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1051
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1052 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1107
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 160/366 (43%), Gaps = 40/366 (10%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTA-FVGFVSD 70
D P GL N GN CF+N+ +Q L P ++ L++ T +I A F F +
Sbjct: 30 DKAPLGLRNLGNTCFMNSIVQCLAHTRPLLEYCLKDCYTSEINNITSSNRGALFEAFATL 89
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
+ S+ + IS P F + ++ F P Q+D+QEFL +++
Sbjct: 90 MKSIWRSSNGEYAIS---------PQAFRSQIQKFAPRFMGY-----SQQDSQEFLHYLL 135
Query: 131 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
+H+++ ++ + E D+ + K A R F S + D F
Sbjct: 136 QGLHEDINRITSRPRHVT---------TEIDDNLSDSQKAAEAWKRYLRFDDSKIVDCFV 186
Query: 191 GQLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLEGYRTSS 246
+K G+K S T PF L L I S++V TI+ L LF+ E L+G +
Sbjct: 187 XXXXXTLKCSVCGHK-SVTFDPFWDLSLPIPKSSDSV-TIQQCLSLFTKEEVLDGDEKPT 244
Query: 247 TGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
N KS I KIL+LHL RFS G + KL+ V FPL +L + P
Sbjct: 245 CSNCETRQRCTKSFTIHRCPKILVLHLKRFSPGERFRAKLNTRVEFPLT-----NLDLCP 299
Query: 306 SAEGRKYEL--VATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQA 362
Y + + V++H GHYTA + + +W +D VT + +S+V +A
Sbjct: 300 YMSNSHYVMYNLYAVSNHSGSTYSGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEA 359
Query: 363 YVLFYK 368
YVLFY+
Sbjct: 360 YVLFYE 365
>gi|148696216|gb|EDL28163.1| ubiquitin specific peptidase 8, isoform CRA_a [Mus musculus]
Length = 1108
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 768 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 822 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 872 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 920
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 921 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 981 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1040
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1041 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|344230726|gb|EGV62611.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 314
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 66/309 (21%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEE----------------- 160
+QEDA+EFL +++D +H+EL+ SI N +SL E
Sbjct: 16 QQEDAEEFLGYLLDGLHEELVH------SIREVNNEQISLLLETVADNETKLQIKNAIKI 69
Query: 161 -----------------------DEWETVGPKNKSAVT-RTQSFLPSALSDIFGGQLKSV 196
+ W +G +K + RT PS + IFGGQ +SV
Sbjct: 70 IKKLNNSSNGGNDNDNSNDDDDNEGWNEIGGGHKKVSSKRTVEIEPSPIKTIFGGQFRSV 129
Query: 197 VKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 255
++ K S T+ PF + LDI ++ ++ IEDA + + PE + + V A
Sbjct: 130 LQIPNKKDQSITLDPFQCIQLDIKADQINNIEDAFKQLNEPEQI----PFKLNDNKEVLA 185
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS---TKLHKSVRFPLQLVLGRDLLVT-PSAEGRK 311
KK I +L +L++HL RFS+ + + KL K + + +L + +L + R
Sbjct: 186 KKQTFIDSLPDVLVIHLKRFSFENVNNGNIEKLRKKIEYTHKLSIPLELFSNWRKSVNRD 245
Query: 312 YELVATVTHHGRDPSKGHYTADARY-----FNDQWLHFDDASVTAIGTSKVLHD-----Q 361
Y+L V HHG GHYT D + +W+ DD S+ I VL +
Sbjct: 246 YKLTGVVYHHGIIAEGGHYTCDVLRPMTVSDSSRWIRIDDTSINNIDEDDVLSNDDDTKN 305
Query: 362 AYVLFYKQV 370
AY+LFY+++
Sbjct: 306 AYLLFYQKL 314
>gi|62243586|ref|NP_001014443.1| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|74027267|ref|NP_036607.3| ubiquitin carboxyl-terminal hydrolase 21 [Homo sapiens]
gi|10720334|sp|Q9UK80.1|UBP21_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853113|gb|AAD54321.1|AF177758_1 ubiquitin specific protease 16 [Homo sapiens]
gi|119573029|gb|EAW52644.1| ubiquitin specific peptidase 21, isoform CRA_c [Homo sapiens]
gi|158258070|dbj|BAF85008.1| unnamed protein product [Homo sapiens]
gi|223460370|gb|AAI36292.1| Ubiquitin specific peptidase 21 [Homo sapiens]
Length = 565
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 165/377 (43%), Gaps = 60/377 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 73
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 247
Query: 74 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335
Query: 189 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 238
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 395
Query: 239 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 294
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 455
Query: 295 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
V G + ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 456 MSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 514
Query: 351 AIGTSKVLHDQAYVLFY 367
T V + Y+LFY
Sbjct: 515 PATTDAVAKCKPYILFY 531
>gi|328698286|ref|XP_001952840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Acyrthosiphon pisum]
Length = 385
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 166/369 (44%), Gaps = 47/369 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + E + R+ K TL + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFRDKVLEYKARN--KRNKETLLTCLA-----DLFHSI 77
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + + +P F L+ + N + Q+DA EFL+F+++ + +E+
Sbjct: 78 ATQKKKVGSI------APKKFINRLRKEKEEFNNYM-----QQDAHEFLNFLINHI-NEI 125
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + T+ NG + ++ + E T + S+ + P+ + +IF G L S
Sbjct: 126 ILSERNQTNCNGKSKSITPNIVDGESTTSSITSSSSHNQD----PTWVHEIFQGILTSET 181
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 255
+ + S+ + F L +DI +I LR FS E L N A
Sbjct: 182 RCLNCEEVSSKDEDFFDLQVDIDQNT--SITHCLRCFSNTEMLCSDNKFKCDNCCSYQEA 239
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 240 QKCMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RM 296
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y LVA V H G P++GHY + + +D WL FDD V I S +
Sbjct: 297 YNLVAVVIHCGSGPNRGHYISIVKS-HDFWLLFDDDMVDKIDQSAIEDFYGLTSDLQKSS 355
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 356 ETGYILFYQ 364
>gi|297280506|ref|XP_001117779.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 6
[Macaca mulatta]
Length = 595
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 243 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 301
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 302 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 343
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 344 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 398
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 399 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 458
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 459 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 517
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 518 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 573
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 574 QVASSEGYVLFYQ 586
>gi|355558658|gb|EHH15438.1| hypothetical protein EGK_01528 [Macaca mulatta]
gi|355745834|gb|EHH50459.1| hypothetical protein EGM_01292 [Macaca fascicularis]
gi|380811730|gb|AFE77740.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|383417519|gb|AFH31973.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|384946444|gb|AFI36827.1| ubiquitin carboxyl-terminal hydrolase 21 [Macaca mulatta]
gi|410219870|gb|JAA07154.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410219872|gb|JAA07155.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410302294|gb|JAA29747.1| ubiquitin specific peptidase 21 [Pan troglodytes]
gi|410351841|gb|JAA42524.1| ubiquitin specific peptidase 21 [Pan troglodytes]
Length = 565
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|390337799|ref|XP_783431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Strongylocentrotus purpuratus]
Length = 370
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 162/369 (43%), Gaps = 55/369 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + +T PK LT + +T
Sbjct: 35 GLVNFGNTCYCNSVLQALYFCKPFRDRVLAYKT--APKKKETLLTCLSDLFNSINT---- 88
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ +P F A LK N + Q+DA EFL ++++ + D L
Sbjct: 89 --QKKKVGVV------APKKFVARLKK-----ENEVFDNYMQQDAHEFLIYLLNTIAD-L 134
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + ++ I G + +T+ P+ + +IF G L +
Sbjct: 135 LQAERKADKIAGKGKPGTP--------NGIINGNNNDMKTE---PTWIHEIFQGTLTNET 183
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ + S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLCCEGVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCHEYKYYCETCCSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEG--RK 311
+K ++++ L ++L LHL RF Y Q TKL V FPL+L R + + AE +
Sbjct: 242 QKRMQVKKLPQLLALHLKRFKYMEQSHRYTKLSYRVVFPLEL---RLMNTSDDAEAPDKL 298
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LV+ V H G P++GHY + F WL FDD V I S +
Sbjct: 299 YDLVSVVVHCGSGPNRGHYITIVKSFG-FWLLFDDDMVEKIEISSIEEFYGLATEVQKNS 357
Query: 360 DQAYVLFYK 368
D Y+LFY+
Sbjct: 358 DSGYILFYQ 366
>gi|296489875|tpg|DAA31988.1| TPA: ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|440893879|gb|ELR46495.1| Ubiquitin carboxyl-terminal hydrolase 21 [Bos grunniens mutus]
Length = 565
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTAL------VSLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 162/367 (44%), Gaps = 53/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 326
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 377
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 190
H+E+ N V E P ++ + +L S + D+F
Sbjct: 378 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 424
Query: 191 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTS 245
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 425 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 482
Query: 246 STGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 302
+ K+ +K +Q KIL+LHL RFS ++KL V FPL+ + R+
Sbjct: 483 TCYRCRA--RKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-F 539
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQ 361
+ + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 540 ASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSD 598
Query: 362 AYVLFYK 368
AY+LFY+
Sbjct: 599 AYLLFYE 605
>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
Length = 551
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 152/365 (41%), Gaps = 58/365 (15%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 75
PRG+ N GN CF+NA LQAL S + FV + L P L ++ S +
Sbjct: 231 PRGMRNLGNTCFMNAVLQALGSITEFVDYIMTL----------PPLEDYMEEASGKNGNC 280
Query: 76 GGSSKKKNI----SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ + + + SV + P +P F + V G RQ DA EF+ +++D
Sbjct: 281 YLTDEYRKLLHTMSVRNFREPCNPGPFREAFVS----VCTRFRGF-RQHDAHEFMKYLLD 335
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
QMH EL K + L + E+DE T LS F G
Sbjct: 336 QMHTELKKCKN-----------LPEMPEDDEKVT------------------PLSRHFEG 366
Query: 192 QLKSVVKAQ--GNKASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLE-GYRTSS 246
L+S V Q GN S + F L LDI S+ + D L F E LE G +
Sbjct: 367 MLQSSVVCQVCGN-CSNKLDEFWDLSLDIPRISKPRIRLSDCLSDFFKKEILEKGDKPMC 425
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
+ T K + I+ L ++L L + RF G K+ + FP+Q + + L S
Sbjct: 426 SKCNTKQTCSKQLFIKKLPEVLCLQIKRFK---DGGGKIDTLIEFPMQSLSVDEFLTEDS 482
Query: 307 AEG-RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
E YEL + + H G GHY A R +W HFDD VT S + +AY+L
Sbjct: 483 DEPPCTYELQSIIVHVGYGCQSGHYVAFGRRGGAKWYHFDDTKVTTAEPSLISKQKAYLL 542
Query: 366 FYKQV 370
Y +
Sbjct: 543 LYTKT 547
>gi|148696218|gb|EDL28165.1| ubiquitin specific peptidase 8, isoform CRA_c [Mus musculus]
Length = 1080
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 165/377 (43%), Gaps = 60/377 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 73
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 74 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 189 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 238
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 239 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 294
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 454
Query: 295 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
V G + ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 455 MSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 513
Query: 351 AIGTSKVLHDQAYVLFY 367
T V + Y+LFY
Sbjct: 514 PATTDAVAKCKPYILFY 530
>gi|149759807|ref|XP_001503883.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Equus caballus]
gi|149759809|ref|XP_001503880.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1
[Equus caballus]
Length = 565
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN+ S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANSPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSIGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCRC-QTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 16 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 66
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 67 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 117
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 118 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 167
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 168 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 225
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 226 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 284
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A V++H GHYTA R +W F+D+SVT + +S+V AY+ F
Sbjct: 285 NHAVYNLYA-VSNHSGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHF 343
Query: 367 YK 368
Y+
Sbjct: 344 YE 345
>gi|7363366|gb|AAF61308.1|AF233442_1 NEDD8-specific protease [Homo sapiens]
Length = 381
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF--VQLLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 29 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIG---- 83
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ LD +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 84 ---------ALWHLDSCEAVNPTRFRAVFQKYVP----SFSGYS-QQDAQEFLKLLMERL 129
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 130 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 184
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ + D LF+ E
Sbjct: 185 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVFLRDCFNLFTKEEE 244
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 245 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 303
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 304 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 359
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 360 QVASSEGYVLFYQ 372
>gi|357588457|ref|NP_001239509.1| ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Mus musculus]
Length = 1091
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 751 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 804
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 805 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 854
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 855 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 903
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 904 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 963
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 964 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1023
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1024 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1079
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 63/367 (17%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V +L PRGL+N GN C+ NA LQ L P + LL+ +R + + V
Sbjct: 345 VINLTPRGLVNCGNSCYANAVLQCLTCTKPLIIFLLRRSHSRACCGKDWCLMCELEQHV- 403
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P SPS ++ + G QEDA EFL +
Sbjct: 404 --------------MMLRECGGPLSPSRILLHMRKINCQI-----GDGSQEDAHEFLRLL 444
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M + L L ED+ V P+ + + + F
Sbjct: 445 IASMQ----------------SICLERLGGEDK---VDPRLQET---------TFIQHTF 476
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG L+S VK + + S + + L L+I+ V ++EDAL F+ PE L+G G
Sbjct: 477 GGLLRSKVKCLRCHHESERYENIMDLTLEIFG-WVESLEDALTQFTTPEELDGENMYRCG 535
Query: 249 N-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
A V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 536 RCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYG--KINKCITFPDML----DMIPFMTG 589
Query: 308 EGRK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y L A V H + GHY A + W DD V + S+V+ + A
Sbjct: 590 MGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQVMLEGA 649
Query: 363 YVLFYKQ 369
Y+LFYK+
Sbjct: 650 YILFYKR 656
>gi|28972047|dbj|BAC65477.1| mKIAA0055 protein [Mus musculus]
Length = 1108
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 768 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 821
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 822 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 871
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 872 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 920
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 921 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 980
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 981 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1040
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1041 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1096
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 154/370 (41%), Gaps = 73/370 (19%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 69
V ++ PRGL+N GN C+ NA LQ L P + LLQ +R + +
Sbjct: 373 VFNISPRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNWCLMCEL----- 427
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+K + + + G P SPS + +++ + G QEDA EFL +
Sbjct: 428 ----------EKHVMMLRESGGPLSPSRILSHMRSINCQI-----GDGSQEDAHEFLRLL 472
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G G + A + +F+ F
Sbjct: 473 VTSMQSICLEKLG------------------------GEREVDARLQETTFI----QHTF 504
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE+L+G YR
Sbjct: 505 GGRLRSKVKCLRCHLESERYENIMDLTLEIFG-WVESLEDALTQFTTPEDLDGENMYRCR 563
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL-VT 304
V A+K + I IL + L RF G G K++K + FP D+L +
Sbjct: 564 RC--TTYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFP-------DMLDMI 612
Query: 305 PSAEGRK-----YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
P G Y L A V H GHY A + W DDA V + T++V
Sbjct: 613 PFMTGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQV 672
Query: 358 LHDQAYVLFY 367
+ + AY+LFY
Sbjct: 673 MSEGAYILFY 682
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 156/367 (42%), Gaps = 66/367 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 75
PRGL N GN CF+NA LQAL F + + L P+L +V D
Sbjct: 220 PRGLRNLGNTCFMNAVLQALACIKDFREYILNL----------PSLE---DYVEDEKIAQ 266
Query: 76 GGSS------KK--KNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
G+ +K ++S + P SP+ F + P RQ D+ EFL
Sbjct: 267 NGNCFLTDEYQKLLASMSARNFRDPTSPNEFREAFVSACPRFRGF-----RQHDSHEFLR 321
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
+++DQMH E+ K + +L E P +K+ + +S
Sbjct: 322 YLLDQMHTEMRKCR--------------NLPE-------MPDDKT----------TPISK 350
Query: 188 IFGGQLKSVVKAQGNK-ASATVQPFLLLHLDI--YSEAVHTIEDALRLFSAPENLE-GYR 243
F G L+S V Q + S + F+ L LD+ S+A + + D L LF E LE G +
Sbjct: 351 SFEGTLQSSVICQTCRNVSNKMDDFMDLSLDVPRVSKARYRLSDCLDLFFQRELLEKGEK 410
Query: 244 TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLV 303
+ T K + I+ L ++L LH+ RF K+ + FPL + D L
Sbjct: 411 PECSKCKSKQTCSKQMFIKKLPEVLCLHIKRF---RDNGGKIDTLIEFPLTGLSVDDFLT 467
Query: 304 TPSAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
S E YEL + + H G S GHY A R +W FDD V A+ TS + +A
Sbjct: 468 EDSDEPPCVYELHSIIVHIGYGCSSGHYIAFGRR-GAKWYQFDDTVVKAMETSNITKQRA 526
Query: 363 YVLFYKQ 369
YVL Y +
Sbjct: 527 YVLMYTK 533
>gi|25152734|ref|NP_510570.2| Protein USP-33 [Caenorhabditis elegans]
gi|22265887|emb|CAB01885.2| Protein USP-33 [Caenorhabditis elegans]
Length = 716
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 155/403 (38%), Gaps = 89/403 (22%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL--------RTRDIPKAGYPTLTAFVGFVS 69
G +N GN C++NA LQ L CSPF Q L EL + DIPK S
Sbjct: 183 GYLNFGNTCYMNAVLQLLGHCSPFTQYLIELIPPGGWSNCSHDIPKTAIQMALDLRNMYS 242
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
DF P SP ++N P +Q+DA EF+ +
Sbjct: 243 DFPLPY-----------------LSPWKIITCVRNEMPGFECF-----QQQDASEFMRNL 280
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D + D LK E N L+ + P+ A+ +A+S IF
Sbjct: 281 LDIL-DRDLKTCSEYHRTN----TLIEMG--------NPEMDYAIAMNAPHTKTAISAIF 327
Query: 190 GGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEA-------------------------- 222
G L++ ++ S T++ FL L + I E
Sbjct: 328 QGVLENQIQCHSCGFRSRTIENFLDLSIPIVGENEFEEMYASKKLDTPKAPCTSSNIEDG 387
Query: 223 ------VH-------TIEDALRLFSAPENLEGYRTSSTGNAGV-VTAKKSVKIQTLSKIL 268
VH ++E L F L+ S V V A KS K L +++
Sbjct: 388 QDPGFLVHQGAFNKTSLESCLDRFFQNSTLQDDNQYSCSKCEVLVDATKSTKAHRLPEVI 447
Query: 269 ILHLMRFSYGSQGSTKLHKSVRFPLQLV-LGRDLLVTPSAEGRKYELVATVTHHGRDPSK 327
I+ L RF + GS K+ K V FPL+ GR T S E Y+LV V H GR
Sbjct: 448 IIQLKRFRHTMFGSCKVGKVVEFPLRSQDFGR---WTTSGEPALYDLVGFVVHEGRSLEF 504
Query: 328 GHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
GHY + R+ D QW FDD VT ++V Q Y+L Y++
Sbjct: 505 GHYVSYCRHEQDNQWYKFDDMVVTRCDATQVAKSQPYILMYRK 547
>gi|31981044|ref|NP_062703.2| ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Mus musculus]
gi|44888442|sp|Q80U87.2|UBP8_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=mUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|29747898|gb|AAH50947.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|38181867|gb|AAH61465.1| Ubiquitin specific peptidase 8 [Mus musculus]
gi|42490777|gb|AAH66126.1| Ubiquitin specific peptidase 8 [Mus musculus]
Length = 1080
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|114052120|ref|NP_001039841.1| ubiquitin carboxyl-terminal hydrolase 21 [Bos taurus]
gi|122136171|sp|Q2KJ72.1|UBP21_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|86821766|gb|AAI05489.1| Ubiquitin specific peptidase 21 [Bos taurus]
Length = 565
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYP-TLT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTAL------VSLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|5058999|gb|AAD38869.1|AF057146_1 putative deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 157/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 265 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----NAHTALMEEF----- 315
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + I + SPS F+ ++ + P Q+DAQEFL F++D +H
Sbjct: 316 -AKLIQTIWTSSLNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLH-- 367
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFGGQL 193
N N V E P ++ + +L S + D+F GQL
Sbjct: 368 -----------NAVNRVTVRPKSNPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFVGQL 416
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 417 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 474
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 475 RCRTRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASETT 533
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT++ +S+V AY+LF
Sbjct: 534 NHAVYNLYAVSNHSGTT-VGGHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLF 592
Query: 367 YK 368
Y+
Sbjct: 593 YE 594
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 155/359 (43%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P +N T S + +QEDA EFL F ++ MH
Sbjct: 112 SG-----------DVMKPS---------QNLT-----SAFHKRKQEDAHEFLMFTLETMH 146
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 147 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 173
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
+S +K + ++ + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 174 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 231
Query: 252 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 232 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 288
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 289 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|194373951|dbj|BAG62288.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 158/358 (44%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI ++ L G V++ F
Sbjct: 225 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRS---NLLGHKGEVAEEFGII- 280
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L G R SP F+ + + + +G Q+D+QE L F+MD +
Sbjct: 281 --------MKALWTGQYRYISPKDFKITVGK----INDQFAGYS-QQDSQELLLFLMDGL 327
Query: 134 HDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
H++L K N L A E W+ N+S + +F GQ
Sbjct: 328 HEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQ 376
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNA 250
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 377 FKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCR 436
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +
Sbjct: 437 ARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK 496
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 497 KYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 553
>gi|74137217|dbj|BAE21996.1| unnamed protein product [Mus musculus]
Length = 1080
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|167999895|ref|XP_001752652.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696183|gb|EDQ82523.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 162/369 (43%), Gaps = 41/369 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C+ N+ LQAL C PF + L E + P A + + +S+ T
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYCGQKKPVA--ESEENLLTCLSELFTQINS 81
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
KK + +P F ++ N + +DA EFL+F+++++ D L
Sbjct: 82 QKKKTGV--------IAPKRFVQRVRK-----QNELFRSYMHQDAHEFLNFLLNELVDIL 128
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+K + S +G++T+ + G N A + + + + IF G L +
Sbjct: 129 VKEAQAANSNSGSHTSPEKVVGN------GATNGLANGNHKEPVVTWVHKIFQGTLTNET 182
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTA 255
+ + +A + FL L LDI E +I LR FS+ E L + + A
Sbjct: 183 RCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCSLQEA 240
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
+K +KI++ +IL LHL RF Y Q KL V FPL+L L P +E +Y
Sbjct: 241 QKRMKIKSPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEA-EYS 299
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL------------HDQ 361
L A V H G P+ GHY + + N WL FDD +V I S V D
Sbjct: 300 LFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDESIVQTFFGSTQEYSNNTDH 358
Query: 362 AYVLFYKQV 370
Y+LFY+ +
Sbjct: 359 GYILFYESL 367
>gi|74218724|dbj|BAE25218.1| unnamed protein product [Mus musculus]
Length = 988
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 648 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 701
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 702 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 751
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 752 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 800
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 801 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 860
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 861 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 920
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 921 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 976
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 154/369 (41%), Gaps = 71/369 (19%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVS 69
V ++ PRGL+N GN C+ NA LQ L P + LLQ +R + +
Sbjct: 402 VFNISPRGLLNCGNSCYANAVLQCLTCTKPLIIYLLQRSHSRTCCVTNWCLMCEL----- 456
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+K + + + G P SPS + +++ + G QEDA EFL +
Sbjct: 457 ----------EKHVMMLRESGGPLSPSRILSHMRSINCQI-----GDGSQEDAHEFLRLL 501
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G G + A + +F+ F
Sbjct: 502 VTSMQSICLEKLG------------------------GEREVDARLQETTFI----QHTF 533
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+I+ V ++EDAL F+ PE+L+G YR
Sbjct: 534 GGRLRSKVKCLRCHLESERYENIMDLTLEIFG-WVESLEDALTQFTTPEDLDGENMYRCR 592
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
V A+K + I IL + L RF G G K++K + FP L D++ P
Sbjct: 593 RC--TTYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPDML----DMI--P 642
Query: 306 SAEGRK-----YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
G Y L A V H GHY A + W DDA V + T++V+
Sbjct: 643 FMTGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVM 702
Query: 359 HDQAYVLFY 367
+ AY+LFY
Sbjct: 703 SEGAYILFY 711
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 154/356 (43%), Gaps = 33/356 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G +F G
Sbjct: 743 GLRNLGNTCYMNSILQCLCNTPAMAEYFNSNYYLEDINRSN------ILGHKGEFAEEFG 796
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 797 VIMK-----ALWAGLYKCISPRDFKITIGKIN----DQFAGY-DQQDSQELLLFLMDGLH 846
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
++L K + N L D A ++ + S + +F GQ K
Sbjct: 847 EDLNKADNKKRYKEEENDHLDDQTAAD----------LAWSKHKLLNESIIVALFQGQFK 896
Query: 195 SVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
S V+ ++ S T + F+ L L + S + +++D LRLFS E L + +
Sbjct: 897 STVQCSTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAH 956
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ K ++I + IL++HL RFSY + KL +V FPL + ++ P ++Y
Sbjct: 957 RDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTTVDFPLDNLDLTQYVIGPKQTLKRY 1016
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
L H+G GHYTA + Q W FDD V+ I TS V AY+LFY
Sbjct: 1017 YLYGVSNHYG-GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1071
>gi|167534112|ref|XP_001748734.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772696|gb|EDQ86344.1| predicted protein [Monosiga brevicollis MX1]
Length = 356
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 135/273 (49%), Gaps = 36/273 (13%)
Query: 119 QEDAQEFLSFIMDQMHDEL---------LKLQGESTSINGANTALVSLAEEDEWETVGPK 169
Q+DA+E LSF++D++H E+ L +G+ ++ G + A E W K
Sbjct: 92 QQDAEELLSFLLDKLHLEVAAYLEKHPELMEEGDLSAGAGNDDA------EGGWHEASSK 145
Query: 170 ----NKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHT 225
+ + V + + +S F +++S + +G + S T+QP+ L LDI E V +
Sbjct: 146 GVGVSVNTVETHDRQVETPISSAFTVRMRSTLDMKGQRRSVTIQPYHCLPLDIEPEHVRS 205
Query: 226 IEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKL 285
+ DA+R E L ++ V+ K + ++TL IL+L L RFSYG G KL
Sbjct: 206 LHDAMR-----ETLRNEPLYASSQDEVI-GHKQLLLETLPPILLLSLKRFSYGPYGPIKL 259
Query: 286 HKSVRFPLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFNDQ 340
K V+F +L + + + +P+A YEL A + HHG + +GHYT R ++
Sbjct: 260 QKHVKFEAELCIDPEFM-SPTARQIHGSDTVYELAAVLFHHGSESHQGHYTC-CRSTSEG 317
Query: 341 WLHFDDASVTAIGTSKVLHDQ----AYVLFYKQ 369
W+ +D V+ I + V + AYVL Y++
Sbjct: 318 WIELNDTRVSPIALTAVCAPRSGADAYVLCYRK 350
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 149/355 (41%), Gaps = 62/355 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P +L ++ + G+ + ++ + SG
Sbjct: 112 GLQNLGNTCFLNSALQCLTYTPPLANYMLSHEHSKTCHEQGFCMMCTMQSHITQALSNSG 171
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
K + + D+ R + K+F QEDA EFL + +D M
Sbjct: 172 NVIKPMPV-INDLRR---------IAKHFRFG---------NQEDAHEFLRYTVDAMQKA 212
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L NG+N T+ +F+ IFGG L+S
Sbjct: 213 CL---------NGSNKL------------------DRHTQATTFI----HQIFGGYLRSR 241
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK K S T P+L + L+I S +I AL F PE L+G Y+ S +
Sbjct: 242 VKCMNCKGVSDTFDPYLDITLEIKS--AQSINKALEQFVKPEQLDGENAYKCSKCKK--M 297
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A K + S +L L L RF+ S G K+ K V++P L + R + P+ E Y
Sbjct: 298 VPASKRFTVHRASNVLTLSLKRFANFSGG--KITKEVKYPEYLDI-RPYMSQPNGEPIIY 354
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + N QW +D++V+ VL+ QAYVLFY
Sbjct: 355 ALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQAYVLFY 409
>gi|395822737|ref|XP_003784667.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Otolemur
garnettii]
Length = 1087
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 801 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 850
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 851 EDLNKADNRKRHKEENNDHLDDFKAAEQAWQKHKQLNESIIVA-----------LFQGQF 899
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 959
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1019
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSEISVSSVKSSAAYILFY 1075
>gi|126277553|ref|XP_001370028.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Monodelphis
domestica]
Length = 1102
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 762 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 815
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 816 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 865
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 866 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 914
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 915 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 974
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 975 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDLSQYVIGPKNNLKR 1034
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1035 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1090
>gi|313231914|emb|CBY09026.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 171/382 (44%), Gaps = 75/382 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GLIN GN C+ N+ LQAL C PF + + E R K T + + ++D
Sbjct: 28 GLINFGNTCYCNSVLQALYFCEPFRERVLEYR-----KQSKKTDGSLIWCLADLFNQLAA 82
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM----DQM 133
K++ P P+ F +LK N + Q DAQEFL+F++ D +
Sbjct: 83 KKKRQ---------PIKPTKFVHMLKKENDAFDNVL-----QHDAQEFLNFLLNHIGDTL 128
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
DE+++ Q VS + D + P + + + + ++F G +
Sbjct: 129 RDEIVRNQK------------VSQTQSDTHQHNSPCD---------YQETWVHELFEGVM 167
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 251
+V + + + + FL L +DI E +I L+ FSA E L+G ++
Sbjct: 168 TNVTRCLRCESVNQKDERFLDLSVDI--EPNTSINHCLKSFSATETLKGEHKYYCEVCCS 225
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A KS++I++ K+L LHL RF + + + H + + ++V R L + PS++ K
Sbjct: 226 KQEAHKSLEIRSFPKVLALHLKRFRF--EDGVRSHMT-KLSYRVVFSRQLRI-PSSKYSK 281
Query: 312 -------YELVATVTHHGRDPSKGHYTADARYF--NDQWLHFDDASVTAIGTSKVLH--- 359
YEL A V H G++ ++GHY R +DQWL FDD V + +++
Sbjct: 282 DDGSTILYELNAVVVHCGKEINRGHYITLVRAHPSHDQWLVFDDEEVDFLPQAELEAFFG 341
Query: 360 -----------DQAYVLFYKQV 370
+ AY+LFY++V
Sbjct: 342 LTESSAGRGNLESAYILFYERV 363
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 165/385 (42%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C+PF + L E +++I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCAPFREQLLEYYANSKNIGDAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T + SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D L K E+ ++ + E GPK+ A ++ L
Sbjct: 113 AHEFLNFLLNELVDILEK---EAQAVKSE----TETSSPPEKTANGPKHAQANGVSKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESI 363
>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
Length = 366
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 162/369 (43%), Gaps = 57/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + E + ++ + LT S
Sbjct: 32 GLVNFGNTCYSNSVLQALYFCKPFRDRVLEYKAKN-KRTKETLLTCLADLFH-----SIA 85
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ + + +
Sbjct: 86 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHISEII 133
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + ++++ N + +N +A T + P+ + +IF G L S
Sbjct: 134 LAERQQNSTTNNIKSKATG------------ENGTAHTTPE---PTWVHEIFQGILTSET 178
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TA 255
+ S+ + F L +DI E +I LR FS E L N A
Sbjct: 179 RCLNCENVSSKDEDFFDLQVDI--EQNTSITHCLRCFSNTETLCSDNKFKCDNCSSYQEA 236
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 237 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 293
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 294 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDQVDKIDASTIEDFYGLTSDTQKSS 352
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 353 ETGYILFYQ 361
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 145/356 (40%), Gaps = 60/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + ++ AG+ L A VS
Sbjct: 102 GLQNLGNTCFLNSVLQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSR------ 155
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ GR +P + L+ + + N+ RQEDA E++ +++ MH
Sbjct: 156 --------ALQSSGRILAPKDLVSNLRCISRNFRNA-----RQEDAHEYMVNLLESMHKC 202
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L L S S + +LV IFGG+L+S
Sbjct: 203 CLPLGLPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 232
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--YRTSSTGNAGVV 253
VK Q + S PFL L LDI +I A + F+ PE L+G + V
Sbjct: 233 VKCMQCSFCSNKFDPFLDLSLDIV--KADSIYKAFKNFTTPELLDGGERQYQCQQCKQKV 290
Query: 254 TAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-K 311
A K + +L +HL RF SY + K+HK + F L L + A+G K
Sbjct: 291 KALKQFTVHKAPYVLTIHLKRFQSYNLE--EKIHKKIHFGPTLDLA-PFVSGSYADGDLK 347
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + HHG GHY R + W DD V+ +G V QAY+LFY
Sbjct: 348 YTLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVGDRTVYEQQAYMLFY 403
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 62/378 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 73
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 74 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 189 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 238
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 239 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 297
L N G + K I L +L LH+ RF + + +K+ V FP++ L
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK-SL 453
Query: 298 GRDLLVTPSAEGRK--------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
G K Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 454 DMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSV 512
Query: 350 TAIGTSKVLHDQAYVLFY 367
T V + Y+LFY
Sbjct: 513 RPATTDAVAKCKPYILFY 530
>gi|395503242|ref|XP_003755979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Sarcophilus harrisii]
Length = 1069
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 729 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 782
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 783 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 832
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 833 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 881
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 882 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 941
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 942 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKR 1001
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1002 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1057
>gi|366987127|ref|XP_003673330.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
gi|342299193|emb|CCC66942.1| hypothetical protein NCAS_0A03840 [Naumovozyma castellii CBS 4309]
Length = 917
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 81/329 (24%)
Query: 118 RQEDAQEFLSFIMDQMHDELLK----------------LQGESTSI-------------- 147
RQEDA+EFL+ ++DQ+H+EL+ + ES I
Sbjct: 591 RQEDAEEFLTHLLDQLHEELVSSIDCLTDNEIQNLLQSINDESLKIFIVRNLPRYKKADF 650
Query: 148 ------------NGANTALVSLAEEDEWETVGPKNK------SAVTRTQSFLPSALSDIF 189
N A + ++EW V +K +A RT +PS +S++F
Sbjct: 651 ITNISPKLKELINKYGAANDDTSSDNEWFEVSGSSKKGKKNKTAAKRTVEVIPSPISNLF 710
Query: 190 GGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
GGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L +RTS
Sbjct: 711 GGQFRSVLDIPNNKESQSITLDPFQTIQLDISDPKVNDLESAFKQFSEYE-LLPFRTS-- 767
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS---------VRFPLQLVLG 298
N V AKK I L ++L++ L RF++ + + + S + +++ G
Sbjct: 768 -NGTDVEAKKQTFIDKLPRVLLIQLKRFAFVTNSNKDSNMSNYNAYSGRIEKIRKKIIYG 826
Query: 299 RDLLVTPSA---------EGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDAS 348
DL + + R+Y+L + HHG P GHYTAD + ++W DD +
Sbjct: 827 HDLTIPIESVSSTSLRDDANREYKLTGVIYHHGSSPDGGHYTADVFHQQTNKWYRIDDVN 886
Query: 349 VTAIGTSKVLHDQ--------AYVLFYKQ 369
++ + VL AY+L Y++
Sbjct: 887 ISELKNDHVLDADDNDMGTRTAYILIYEK 915
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPT---LTAFVG 66
+K ++PRG++N N+CF+++ LQ L+ C PF+ +L + TR++ + G + L A V
Sbjct: 424 IKSIIPRGIVNMANICFMSSVLQVLLYCKPFIDILNVISTRNMYSRVGVSSSRLLDACVN 483
Query: 67 FVSDFD 72
FD
Sbjct: 484 LYKQFD 489
>gi|291403018|ref|XP_002717847.1| PREDICTED: ubiquitin specific peptidase 8 [Oryctolagus cuniculus]
Length = 1088
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 748 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 801
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 802 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 851
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 852 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 900
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 901 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 960
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 961 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLESLDLSQYVIGPKNNLKK 1020
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1021 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1076
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 163/377 (43%), Gaps = 60/377 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 73
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F
Sbjct: 188 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMN 247
Query: 74 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 248 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 302
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 303 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 335
Query: 189 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 238
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 336 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLSRFFKVEE 395
Query: 239 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ--- 294
L N G + K I L +L LH+ RF + + +K+ V FP++
Sbjct: 396 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMKSLD 455
Query: 295 ----LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
V G ++ Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 456 MSAFTVRGMTGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSVR 514
Query: 351 AIGTSKVLHDQAYVLFY 367
T V + Y+LFY
Sbjct: 515 PATTDAVAKCKPYILFY 531
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 163/378 (43%), Gaps = 62/378 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFV---GFVSDFDT 73
GL N GN CF+N LQ+ + S F + L ++ + IP PT + G +F +
Sbjct: 187 GLRNLGNTCFMNVVLQSFNNISHFCEYLTQMPCLEGIPFDEPPTHRGRIVTPGRAKEFMS 246
Query: 74 PSGGSSKKKNISV-LDIG----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ + + + + + L++G + SP V+ P +Q+DA EFL++
Sbjct: 247 DALLAEELRKVLLGLNLGGSNGQAISPECLFLVIWKVVPRFRGY-----QQQDAHEFLTY 301
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
++D++H ELL+L L L E +G + K ++ ++ +
Sbjct: 302 MLDRLHTELLQL-------------LPRLGH----EPLGLRGKQSI----------VTAV 334
Query: 189 FGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---------YSEAVHTIEDALRLFSAPEN 238
FGG L SVV + S T +PF L LDI E V ++ +L F E
Sbjct: 335 FGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTYSLTRFFKVEE 394
Query: 239 LEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 297
L N G + K I L +L LH+ RF + + +K+ V FP++ L
Sbjct: 395 LADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRWCNSYRSKVDTQVDFPMK-SL 453
Query: 298 GRDLLVTPSAEGRK--------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
G K Y+L A + HHG GHYTA A + + QW HF+D+SV
Sbjct: 454 DMSAFTVRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAFAVH-DGQWFHFNDSSV 512
Query: 350 TAIGTSKVLHDQAYVLFY 367
T V + Y+LFY
Sbjct: 513 RPATTDAVAKCKPYILFY 530
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/385 (29%), Positives = 164/385 (42%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L E + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSIADAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D +L+ + +S N T+ S E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQSAK-NDQETSPPS-----EKAANGPKNGLANGAKKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + + +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SD----TAENSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESI 363
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G T ++ P+ + + + +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 301
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 682
Query: 302 LVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
V P Y L A + H GHY + + W DD+ + + ++V+
Sbjct: 683 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHRVPMTQVMS 737
Query: 360 DQAYVLFY 367
+ AY+LFY
Sbjct: 738 EGAYMLFY 745
>gi|395503240|ref|XP_003755978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Sarcophilus harrisii]
Length = 1100
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 760 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQDDINRSN------LLGHKGEVAEEFG 813
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + SG Q+D+QE L F+MD +H
Sbjct: 814 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGLH 863
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 864 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 912
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 913 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCKT 972
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P ++
Sbjct: 973 RRDSMKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKR 1032
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1033 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1088
>gi|417411771|gb|JAA52312.1| Putative ubiquitin carboxyl-terminal hydrolase 21, partial
[Desmodus rotundus]
Length = 583
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 231 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 289
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 290 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 331
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN+ S L EE + N K + R S
Sbjct: 332 HLEINR-RGRRAPAILANSPAPSAPRRGGALLEEPDLSDDDRANLMWKRYLERED----S 386
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 387 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 446
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 447 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRL 505
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 506 SLGD--FASDKAGSPTYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 561
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 562 QVASSEGYVLFYQ 574
>gi|168025514|ref|XP_001765279.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683598|gb|EDQ70007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 373
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 171/387 (44%), Gaps = 54/387 (13%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF QLL+ +++ + +A L
Sbjct: 12 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLL 71
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S + S+KK V+ +P F +K N + +D
Sbjct: 72 TCLSELFSQIN------SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQD 114
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQS 179
A EFL+F+++++ D L + + S +G T+ + VG + S + +
Sbjct: 115 AHEFLNFLLNELVDILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKE 166
Query: 180 FLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
+ + + IF G L + + + +A + FL L LDI E +I LR FS+ E
Sbjct: 167 AVVTWVHKIFQGILTNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTET 224
Query: 239 LEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQL 295
L + + A+K +KI++ +IL LHL RF Y Q KL V FPL+L
Sbjct: 225 LNAEDKFFCDKCCSLQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLEL 284
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
L P +E +Y L A V H G P+ GHY + + N WL FDD +V I S
Sbjct: 285 KLCNTTDDAPGSEA-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDES 342
Query: 356 KVL------------HDQAYVLFYKQV 370
V D Y+LFY+ +
Sbjct: 343 IVQTFFGSTQEYSNNTDHGYILFYESL 369
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/359 (29%), Positives = 155/359 (43%), Gaps = 71/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P S ++ A K R+EDA EFL F ++ MH
Sbjct: 112 SG-----------DVMKP-SQNLTSAFHK--------------RKEDAHEFLMFTLETMH 145
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 146 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 172
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
+S +K + ++ + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 173 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 230
Query: 252 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 231 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 287
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 346
>gi|193787209|dbj|BAG52415.1| unnamed protein product [Homo sapiens]
Length = 285
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 121/253 (47%), Gaps = 16/253 (6%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 177
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 33 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA- 91
Query: 178 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 92 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 141
Query: 237 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
E L + R + + K ++I L +L++HL RFSY + KL SV FPL+
Sbjct: 142 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLEN 201
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGT 354
+ ++ P +KY L + H+G +GHYTA + Q W FDD V+ I
Sbjct: 202 LDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDRGHYTAYCKNAARQRWFKFDDHEVSDISV 260
Query: 355 SKVLHDQAYVLFY 367
S V AY+LFY
Sbjct: 261 SSVKSSAAYILFY 273
>gi|397515262|ref|XP_003827873.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pan paniscus]
Length = 899
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 559 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 612
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 613 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 662
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 663 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 711
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 712 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 771
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 772 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 831
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 832 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 887
>gi|332235543|ref|XP_003266963.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Nomascus leucogenys]
gi|332235545|ref|XP_003266964.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Nomascus leucogenys]
gi|332235547|ref|XP_003266965.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Nomascus leucogenys]
Length = 1117
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 777 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 830
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 831 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 880
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 881 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 929
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 930 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 989
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 990 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1049
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1050 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1105
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 160/369 (43%), Gaps = 57/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG AN L S N S T P+ + +IF G L +
Sbjct: 140 LQEERKQEKTNGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTN 184
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 185 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 242
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R
Sbjct: 243 EAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RL 301
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 302 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 361 ESGYILFYQ 369
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 436 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 494
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 495 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 535
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G T ++ P+ + + + +F
Sbjct: 536 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 567
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 568 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 626
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 301
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 627 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 682
Query: 302 LVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
V P Y L A + H GHY + + W DD+ + + ++V+
Sbjct: 683 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 737
Query: 360 DQAYVLFY 367
+ AY+LFY
Sbjct: 738 EGAYMLFY 745
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 160/369 (43%), Gaps = 57/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG AN L S N S T P+ + +IF G L +
Sbjct: 140 LQEERKQEKTNGRLANGTLDS-----------QNNNSNATPA----PTWVHEIFQGTLTN 184
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 185 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 242
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R
Sbjct: 243 EAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RL 301
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 302 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 361 ESGYILFYQ 369
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 399 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 457
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 458 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 498
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G T ++ P+ + + + +F
Sbjct: 499 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 530
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 531 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 589
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 301
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 590 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 645
Query: 302 LVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
V P Y L A + H GHY + + W DD+ + + ++V+
Sbjct: 646 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 700
Query: 360 DQAYVLFY 367
+ AY+LFY
Sbjct: 701 EGAYMLFY 708
>gi|403274276|ref|XP_003928907.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1118
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 166/376 (44%), Gaps = 55/376 (14%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT----AF 64
KS++ L+ GL N GN CF+N+ LQ L + ELR + L +
Sbjct: 53 KSLQGLV--GLRNLGNTCFMNSILQCLSN-------TLELRDYCLRNCHITDLNNNCRSN 103
Query: 65 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
+ +F + N P SPS F ++ P Q+DAQE
Sbjct: 104 TALIEEFAKLTQSLWTSAN------NEPISPSEFRNQVQRCAPKFVGC-----NQQDAQE 152
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDE----WETVGPKNKSAVTRTQSF 180
FL F++D +H+E+ ++ + + LA++++ W + S V
Sbjct: 153 FLRFLLDGLHNEVNRV---TVRPKVSVLDFDHLADDEKGRRMWNMYLAREDSKVV----- 204
Query: 181 LPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSEAVH--TIEDALRLFSAPE 237
D+F GQLKS + +TV PF L + I + T++D LRLF+ +
Sbjct: 205 ------DLFVGQLKSSLTCTACGFRSTVFDPFWDLSIPIAQKISGEVTLKDCLRLFTKED 258
Query: 238 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
L+G R + T K IQ +IL+LHL RFS + ++KL V FPL+ +
Sbjct: 259 VLDGEERPTCTKCKARRKCTKRFSIQKFPQILVLHLKRFSDSNVRASKLSTYVNFPLKDL 318
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND----QWLHFDDASVTAI 352
R+ PS E Y L A H G + GHYTA Y + +W ++D+ V+ +
Sbjct: 319 DLREFASEPS-ERPVYNLYAVSNHSG-NALGGHYTA---YCKNPALGEWYSYNDSRVSPM 373
Query: 353 GTSKVLHDQAYVLFYK 368
+S+V AYVLFY+
Sbjct: 374 SSSQVRSSNAYVLFYE 389
>gi|426216989|ref|XP_004002736.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2 [Ovis
aries]
Length = 592
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 164/379 (43%), Gaps = 63/379 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 240 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 298
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 299 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 340
Query: 134 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVTRT 177
H E+ + + I GA L+++D W+ + S +
Sbjct: 341 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIV-- 398
Query: 178 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRL 232
D+F GQLKS +K Q S T + F L L I ++ ++ D L
Sbjct: 399 ---------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 449
Query: 233 FSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVR 290
F+ E LE T + K + +Q +IL+LHL RFS S+GS K V
Sbjct: 450 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVD 508
Query: 291 FPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V
Sbjct: 509 FPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRV 564
Query: 350 TAIGTSKVLHDQAYVLFYK 368
+ + ++V + YVLFY+
Sbjct: 565 SPVSENQVASSEGYVLFYQ 583
>gi|426216987|ref|XP_004002735.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 1 [Ovis
aries]
Length = 565
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 164/379 (43%), Gaps = 63/379 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNKSAVTRT 177
H E+ + + I GA L+++D W+ + S +
Sbjct: 314 HLEINRRGRRAPPILASSPAPPPPRLGGALLEEPELSDDDRANLMWKRYLEREDSKIV-- 371
Query: 178 QSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRL 232
D+F GQLKS +K Q S T + F L L I ++ ++ D L
Sbjct: 372 ---------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 422
Query: 233 FSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVR 290
F+ E LE T + K + +Q +IL+LHL RFS S+GS K V
Sbjct: 423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVD 481
Query: 291 FPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
FPLQ L LG + A Y+L A H G GHYTA R W ++D+ V
Sbjct: 482 FPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRV 537
Query: 350 TAIGTSKVLHDQAYVLFYK 368
+ + ++V + YVLFY+
Sbjct: 538 SPVSENQVASSEGYVLFYQ 556
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 153/359 (42%), Gaps = 70/359 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 51 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 110
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P + S + +QEDA EFL F ++ MH
Sbjct: 111 SG-----------DVMKP--------------SQILTSAFHKRKQEDAHEFLMFTLETMH 145
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 146 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 172
Query: 193 LKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
+S +K + ++ + PFL + LDI S V +++ AL+ E L G + G
Sbjct: 173 WRSQIKCHHCQGTSYSYDPFLDIPLDISS--VQSVKQALQDTEKAEELCGENSYYCGRCR 230
Query: 252 VVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
A K++K+ + K+L+L L RFS GS G KL + V +P L L + L P+
Sbjct: 231 QKKPASKTLKLYSAPKVLMLVLKRFS-GSMGK-KLDRKVSYPEFLDL-KPYLSQPTGGPL 287
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G GHY + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 PYALYAVLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 346
>gi|296213993|ref|XP_002753525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2
[Callithrix jacchus]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G T ++ P+ + + + +F
Sbjct: 532 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 564 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 622
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 301
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 623 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 678
Query: 302 LVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
V P Y L A + H GHY + + W DD+ + + ++V+
Sbjct: 679 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 733
Query: 360 DQAYVLFY 367
+ AY+LFY
Sbjct: 734 EGAYMLFY 741
>gi|190684690|ref|NP_005145.3| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684692|ref|NP_001122082.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|190684694|ref|NP_001122083.1| ubiquitin carboxyl-terminal hydrolase 8 [Homo sapiens]
gi|731046|sp|P40818.1|UBP8_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
isopeptidase Y; Short=hUBPy; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|83405557|gb|AAI10591.1| Ubiquitin specific peptidase 8 [Homo sapiens]
gi|119597805|gb|EAW77399.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597806|gb|EAW77400.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|119597807|gb|EAW77401.1| ubiquitin specific peptidase 8, isoform CRA_a [Homo sapiens]
gi|168278493|dbj|BAG11126.1| ubiquitin carboxyl-terminal hydrolase 8 [synthetic construct]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|355692711|gb|EHH27314.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|380817804|gb|AFE80776.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|297696632|ref|XP_002825491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pongo
abelii]
gi|395746706|ref|XP_002825492.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pongo
abelii]
gi|395746709|ref|XP_003778495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Pongo abelii]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|355778036|gb|EHH63072.1| Ubiquitin carboxyl-terminal hydrolase 8 [Macaca fascicularis]
gi|383422691|gb|AFH34559.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/362 (29%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L +D+ T + + +F
Sbjct: 275 GLRNLGNTCFMNSILQCLSNTRELKDYCLQRLYMQDLSH----TSSTHTALMEEF----- 325
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 326 ----AKLIQTIWTSCPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 376
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N ++ +DE K + + S + D+F GQL
Sbjct: 377 HNEVNRV----TVRPKSNPENLNHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 426
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 427 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRSYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 484
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ IL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 485 CCRARKRCIKKFSIQRFPTILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 543
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 544 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 602
Query: 367 YK 368
Y+
Sbjct: 603 YE 604
>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
kowalevskii]
Length = 349
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 157/369 (42%), Gaps = 67/369 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + R + PK LT ++
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFRDKVLAYRAQ--PKKKETLLTCLADLFNNI------ 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+S+KK + V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ASQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 125
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ E G K K+ P+ + DIF G L +
Sbjct: 126 ------------------------QAEKQGGKPKNGNDNQIKPEPTWVHDIFQGTLTNET 161
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ + +I LR FS+ E L Y+ A
Sbjct: 162 RCLCCEAVSSKDEDFLDLSVDV--DQNTSITHCLRGFSSTETLCSEYKYYCENCCSKQEA 219
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR--DLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q TKL V FPL+L L D P +
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLMNTSDDAFNPD---KL 276
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 277 YDLVAVVIHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDLQKTS 335
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 336 ESGYILFYQ 344
>gi|388453897|ref|NP_001252548.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
gi|387273381|gb|AFJ70185.1| ubiquitin carboxyl-terminal hydrolase 8 [Macaca mulatta]
Length = 1118
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|344287000|ref|XP_003415244.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Loxodonta
africana]
Length = 565
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 164/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I N A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILANNPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKRGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+L L RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPIYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|441615298|ref|XP_004088287.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Nomascus
leucogenys]
Length = 1011
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 671 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 724
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 725 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 774
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 775 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 823
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 824 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 883
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 884 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 943
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 944 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 999
>gi|403274278|ref|XP_003928908.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1012
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 162/385 (42%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L E + I L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D +L+ + ++ + + E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + Q +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESI 363
>gi|40789062|dbj|BAA06225.2| KIAA0055 [Homo sapiens]
Length = 1120
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 780 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 833
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 834 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 883
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 884 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 932
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 933 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 992
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 993 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1052
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1053 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1108
>gi|410961241|ref|XP_003987192.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Felis
catus]
Length = 1087
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 747 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 800
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 801 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 850
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 851 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 899
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 900 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 959
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 960 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1019
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1020 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1075
>gi|158258232|dbj|BAF85089.1| unnamed protein product [Homo sapiens]
Length = 1118
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|291397578|ref|XP_002715234.1| PREDICTED: ubiquitin-specific protease 21 [Oryctolagus cuniculus]
Length = 565
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 119/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSI--NGANTALV----SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I NG + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILANGPAPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ELENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 166/383 (43%), Gaps = 50/383 (13%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 63
K++ D P G L N GN C+ N+ LQAL C PF + L E + K+G
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYANN--KSGGDAEEN 67
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
+ ++D T SS+KK V+ +P F LK N + +DA
Sbjct: 68 LLTCLADLFTQI--SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 114
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL+F+++++ D L K + S +++ + GPKN A ++ L +
Sbjct: 115 EFLNFLLNELVDILEKEAQAAKSDPETSSSPEKIPN-------GPKNGQANGVSKEPLVT 167
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 168 WVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAE 225
Query: 243 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGR 299
+ + A+K +KI+ IL++HL RF Y Q S KL V FPL+L L
Sbjct: 226 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLSRYKKLSYRVVFPLELKLSN 285
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 358
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 286 ----TVEDSDIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQT 340
Query: 359 -----------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 341 FFGSSQEYSSNTDHGYILFYESL 363
>gi|426379059|ref|XP_004056223.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Gorilla gorilla
gorilla]
Length = 1118
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|114657016|ref|XP_001168761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 6 [Pan
troglodytes]
gi|114657018|ref|XP_001168786.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 7 [Pan
troglodytes]
gi|332843784|ref|XP_001168674.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Pan
troglodytes]
gi|410355753|gb|JAA44480.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355755|gb|JAA44481.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355757|gb|JAA44482.1| ubiquitin specific peptidase 8 [Pan troglodytes]
gi|410355759|gb|JAA44483.1| ubiquitin specific peptidase 8 [Pan troglodytes]
Length = 1118
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|168025346|ref|XP_001765195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683514|gb|EDQ69923.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 371
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 166/373 (44%), Gaps = 49/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTLTAFVGFVSDFDTPS 75
GL N GN C+ N+ LQAL C PF QLL+ +++ + +A LT S +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEHCGQSKPVAEAEENLLTCLSELFSQIN--- 80
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
S+KK V+ +P F +K N + +DA EFL+F+++++ D
Sbjct: 81 ---SQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAHEFLNFLLNELVD 126
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR--TQSFLPSALSDIFGGQL 193
L + + S +G T+ + VG + S + + + + + IF G L
Sbjct: 127 ILEREAKAAKSNSGCETS--------PGKVVGNGSVSGLANGTHKEAVVTWVHKIFQGIL 178
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAG 251
+ + + +A + FL L LDI E +I LR FS+ E L +
Sbjct: 179 TNETRCLRCETITARDETFLDLSLDI--EQNSSITSCLRNFSSTETLNAEDKFFCDKCCS 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ A+K +KI++ +IL LHL RF Y Q KL V FPL+L L P +E
Sbjct: 237 LQEAQKRMKIKSAPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCNTTDDAPGSEA 296
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL----------- 358
+Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 297 -EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEIIDESIVQTFFGSTQEYSN 354
Query: 359 -HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 355 NTDHGYILFYESL 367
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 153/365 (41%), Gaps = 67/365 (18%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
+P GLIN GN C+ N LQ L S P LL + + G+ + V
Sbjct: 112 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACQREGWCFMCELEDHVQ---- 167
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ PFSP + L++ + NS+ G RQEDA EF+ +D M
Sbjct: 168 -----------KAFNNQMPFSPIKILSRLRS----IGNSL-GYGRQEDAHEFMRLAVDCM 211
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
L G T+++ RTQ + + IFGG L
Sbjct: 212 QKICLDEAGGETTLDA--------------------------RTQE--TTLIQHIFGGYL 243
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 249
+S VV Q + S + L L + I V ++EDAL+ F++PE L+G YR
Sbjct: 244 QSQVVCCQCQQRSNLYENMLDLSVGIQGN-VESLEDALKQFTSPEWLDGDNKYRCDRCN- 301
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL---LVTPS 306
V AKK + + IL + L RF G G K++K V FP +L + + + TP
Sbjct: 302 -AYVRAKKRLSVHEAPNILTIALKRFQGGKFG--KINKKVTFPEELDMVPYMSGTVDTPP 358
Query: 307 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
A Y+L A V H + GHY R N W DD+ V + +V+ +AY+
Sbjct: 359 A----YKLYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVDQIRVMSQKAYM 414
Query: 365 LFYKQ 369
L Y++
Sbjct: 415 LLYRR 419
>gi|354489521|ref|XP_003506910.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Cricetulus griseus]
Length = 565
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/372 (31%), Positives = 164/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|194383128|dbj|BAG59120.1| unnamed protein product [Homo sapiens]
Length = 1012
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 158/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 K-SVVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
K S+ S PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KGSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+L L RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLRLKRFSESRIRTSKLTTFVNFPLRDLDLREF-ASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>gi|296213995|ref|XP_002753526.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 3
[Callithrix jacchus]
Length = 1012
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|10720332|sp|Q9QZL6.1|UBP21_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|5853115|gb|AAD54322.1|AF177759_1 ubiquitin specific protease 16 [Mus musculus]
gi|18257320|gb|AAH21903.1| Ubiquitin specific peptidase 21 [Mus musculus]
Length = 566
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 164/373 (43%), Gaps = 50/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRL 488
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 489 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 544
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 545 QVASSEGYVLFYQ 557
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 151/357 (42%), Gaps = 66/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+TLQ L P + L T+ G+ + ++ S
Sbjct: 108 GLQNLGNTCFLNSTLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSN 167
Query: 77 GSSKKKNI--SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ K ++ + IG+ F F + QEDA EFL F +D +
Sbjct: 168 NAIKPTSVINGLKRIGKHF---HFGS------------------QEDAHEFLCFTVDALQ 206
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L ST ++ ++ A + + IFGG L+
Sbjct: 207 KACL---NGSTKLDRSSQATTLIYQ----------------------------IFGGYLR 235
Query: 195 SVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S VK KA S T +PFL + LDI +AV ++ AL F PE L+G Y+ S
Sbjct: 236 SRVKCLNCKAVSDTYEPFLDVTLDI--KAVTSVTRALEQFVKPEQLDGENSYKCSKC--K 291
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+V A K I S +L + L RF+ + G K++K V++P L L R + E
Sbjct: 292 KMVPASKRYTIHRSSNVLTISLKRFANFTGG--KINKDVKYPEYLDL-RAYMSQSIGEPL 348
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + + GHY + N W +DASV VL+ QAYVLFY
Sbjct: 349 IYALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFY 405
>gi|224809307|ref|NP_038947.2| ubiquitin carboxyl-terminal hydrolase 21 [Mus musculus]
Length = 566
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 164/373 (43%), Gaps = 50/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRL 488
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 489 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 544
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 545 QVASSEGYVLFYQ 557
>gi|417405916|gb|JAA49648.1| Putative ubiquitin carboxyl-terminal hydrolase 8 [Desmodus rotundus]
Length = 1116
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKTTIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 879
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEYAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 988
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|67972114|dbj|BAE02399.1| unnamed protein product [Macaca fascicularis]
Length = 331
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 120/253 (47%), Gaps = 16/253 (6%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRT 177
Q+D+QE L F+MD +H++L K N L A E W+ N+S +
Sbjct: 79 QQDSQELLLFLMDGLHEDLNKADNRKRYKEENNEHLDDFKAAEHAWQKHKQLNESIIVA- 137
Query: 178 QSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS
Sbjct: 138 ----------LFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKE 187
Query: 237 ENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
E L + R + + K ++I L +L++HL RFSY + KL SV FPL+
Sbjct: 188 EKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDDRWKQKLQTSVDFPLEN 247
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGT 354
+ ++ P +KY L + H+G GHYTA + Q W FDD V+ I
Sbjct: 248 LDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISV 306
Query: 355 SKVLHDQAYVLFY 367
S V AY+LFY
Sbjct: 307 SSVKSSAAYILFY 319
>gi|332843788|ref|XP_001168540.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Pan
troglodytes]
Length = 1012
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 725
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 726 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 775
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 776 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 824
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 825 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 884
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 885 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 944
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 945 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1000
>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Oreochromis niloticus]
Length = 369
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 161/374 (43%), Gaps = 66/374 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135
Query: 138 LKLQGESTSINGA---NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L+ + + NG N +V+ E E NK+ P+ + DIF G L
Sbjct: 136 LQEEKKQEKQNGRLKNNGTVVTTEAETE-------NKTE--------PTWVHDIFQGTLT 180
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|189083712|ref|NP_001121110.1| ubiquitin carboxyl-terminal hydrolase 21 [Rattus norvegicus]
gi|226751948|sp|B2GUX4.1|UBP21_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; AltName: Full=Ubiquitin
thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|183986536|gb|AAI66443.1| Usp21 protein [Rattus norvegicus]
Length = 565
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 166/375 (44%), Gaps = 55/375 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRLS 488
Query: 297 LG---RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 353
LG D + +P Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 489 LGDFASDKVGSPV-----YQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVS 541
Query: 354 TSKVLHDQAYVLFYK 368
++V + YVLFY+
Sbjct: 542 ENQVASSEGYVLFYQ 556
>gi|57108191|ref|XP_535474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1 [Canis
lupus familiaris]
Length = 1116
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 879
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 159/362 (43%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN F+N+ LQ L + LQ L RD+ A V +F
Sbjct: 11 GLRNLGNTXFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 61
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 62 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 112
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 113 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 162
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 163 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 220
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 221 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 279
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 280 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 338
Query: 367 YK 368
Y+
Sbjct: 339 YE 340
>gi|410961243|ref|XP_003987193.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 2 [Felis
catus]
Length = 1010
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 773
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 942
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 943 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 998
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 162/385 (42%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L E + I L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSILDGEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D +L+ + ++ + + E GPKN A + L
Sbjct: 113 AHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNGPKNGQANGVHKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + Q +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSSQEYSSNTDHGYILFYESL 363
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 145/354 (40%), Gaps = 61/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L +PF +L ++ + G+ + + +G
Sbjct: 30 GLQNMGNTCFLNSALQCLTYTAPFANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANTG 89
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 90 NVIKP--IGVLN--------ELKRIAKHFR---------YGSQEDAHEFLRYTVDAMQKS 130
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGGQLKS 195
L P K T+ +F+ +FGG L+S
Sbjct: 131 CL-----------------------------PGTKLDRQTQATTFI----HQVFGGYLRS 157
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVV 253
VK KA S T PFL + L+I + ++ AL F PE L+G T +V
Sbjct: 158 RVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMV 215
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA K I + +L L L RF+ S G K+ K V++P L L R + E + Y
Sbjct: 216 TASKRFTIHRSANVLTLALKRFANFSGG--KITKDVKYPEYLDL-RPFMSQSQGEPQVYG 272
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + N QW +D+SV+ VL QAYVLFY
Sbjct: 273 LYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLSQQAYVLFY 326
>gi|345794939|ref|XP_003433957.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Canis lupus
familiaris]
Length = 1010
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 670 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 723
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 724 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 773
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 774 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 822
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 823 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 882
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 883 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 942
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 943 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 998
>gi|145340661|ref|XP_001415439.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575662|gb|ABO93731.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 311
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
Q+DA EF+ F++D++ EL + + NG L + + P+ K +
Sbjct: 49 QQDAHEFMRFLLDRLRKELSSGKHAGSQTNGLKGGLSPTSPKT------PQGK--CEQDD 100
Query: 179 SFLPSALSDIFGG-QLKSVVKAQGNKASATVQPFLLLHLDI----------------YSE 221
+ +IFGG + +V + ++S +PF+ L L I E
Sbjct: 101 GVTGDKIMEIFGGVAVTTVTCMKCERSSERREPFMDLSLPIPPVVGKNGSIEEGEGPNGE 160
Query: 222 AVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
A T++ L F E L G+ R G V +A KS +I L +L LHL RF++ G
Sbjct: 161 A--TLQQCLAAFVRNETLSGHGRYFCDGCGKVQSATKSTRIAKLPPVLCLHLKRFTWKGH 218
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARY 336
TKL V FPL DL + P E Y+LVA VTHHG + GHYTA AR
Sbjct: 219 AMRTKLTHDVDFPLD-----DLDLAPYCETNGEAMYDLVAVVTHHGLNAGSGHYTACARE 273
Query: 337 F----NDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
F N W HF+D V ++ +V Q Y+ Y +
Sbjct: 274 FTAEGNSDWQHFNDDDVNSLTAEEVRTGQGYIFLYAR 310
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 158/358 (44%), Gaps = 36/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT-LTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + L++ R+ + A + +F
Sbjct: 63 GLRNLGNTCFMNSILQCLSN----THDLRDYCLRNTHRTDLNNNCRAKAALMDEF----- 113
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + I SPS F+ ++ + P Q+DAQEFL F++D +H+E
Sbjct: 114 -AKLTQTIWTSASNEAISPSDFKMQIQKYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 167
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ ++ +S A + EDE K K + S + D+F GQLKS
Sbjct: 168 VNRVTVKSR----APVEDLDHLSEDE------KGKRMWNKYLESEDSKVVDLFVGQLKSS 217
Query: 197 VKAQGNKASATV-QPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
+ +TV PF L L I + ++ D LRLF+ + L+G + T
Sbjct: 218 LTCSECGFCSTVFDPFWDLSLPIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCK--T 275
Query: 255 AKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+K K IQ KIL+LHL RFS ++KL V FPL+ + R+ S
Sbjct: 276 RRKCTKKFTIQKFPKILVLHLKRFSECRVRTSKLSTFVNFPLKELDLREFASDNSVNA-V 334
Query: 312 YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G GHYTA R +W ++D+ V+ + +S+V AYVLFY+
Sbjct: 335 YNLYAVSNHTGTSLG-GHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYE 391
>gi|389739172|gb|EIM80366.1| hypothetical protein STEHIDRAFT_172638 [Stereum hirsutum FP-91666
SS1]
Length = 1408
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 169/390 (43%), Gaps = 69/390 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++NAT+Q L + PF + E R R A V ++ T
Sbjct: 1049 GLRNLGNTCYMNATMQCLSATVPFARFFTEGRWR-----------AAVNMMNKMGTKGAI 1097
Query: 78 SSKKKNISVLDIGRP----FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ +I + +I + FSP F + ++ S Q D+QEFLS+++D +
Sbjct: 1098 AQAFAHI-LHEIWQGEMSFFSPISFRRSICSYASQFAGS-----EQHDSQEFLSWLLDAL 1151
Query: 134 HDELLKLQGEST-SINGANTALVS-----LAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
H++L ++ +ST + A + +A E EW +N S V D
Sbjct: 1152 HEDLNRVISKSTYEVTPEREAELEKLPQQIASEQEWRIYRMRNDSIVV-----------D 1200
Query: 188 IFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS--EAVHTIEDALRLFSAPENLEGYRT 244
F GQ ++ ++ +K S T F+ L L + + T+++ L F E +E
Sbjct: 1201 FFQGQFRNRMECMTCHKTSTTYNSFMNLSLPVPTSKHGKITLQNCLDAFVKEEVMEKSDA 1260
Query: 245 SSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLV 303
+ N V+ A K + + L +L++ RFS+ + K+ K V FPL+ + + +
Sbjct: 1261 WNCPNCKVLRKATKQLSLSRLPPVLLIQFKRFSFKGPFTDKIDKHVDFPLKGLELTNYMP 1320
Query: 304 TPSAEG---------------------RKYELVATVTHHGRDPSKGHYTADARYFND--Q 340
P G KY+L A H G S GHYTA + N Q
Sbjct: 1321 PPLPPGVDRGQAAVQYGNDDPRQQTPPYKYDLYAVTNHFGSL-SSGHYTA---FINSRGQ 1376
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
WL+ DD+ +T +V+ AYVL+YK+V
Sbjct: 1377 WLYCDDSRITPSDAKEVVGKPAYVLYYKRV 1406
>gi|301770085|ref|XP_002920464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Ailuropoda
melanoleuca]
gi|281341524|gb|EFB17108.1| hypothetical protein PANDA_009195 [Ailuropoda melanoleuca]
Length = 1116
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 155/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 829
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 830 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 879
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 880 EDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 928
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 929 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRT 988
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 989 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1048
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1049 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 155/377 (41%), Gaps = 71/377 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 148 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 186
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 131
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 187 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 244
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPSALSD--- 187
+ NTAL L + V P N T S P +
Sbjct: 245 ALQ----------------NTALAKLPK-----CVLPYNHRKFAHTTSRDTPEKIKHTSW 283
Query: 188 ---IFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 241
I+GG+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 284 VYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDN 343
Query: 242 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQ 294
Y A KS KI IL LHL RFS G + K ++ ++F
Sbjct: 344 KYHCERCKRK--ANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQT 401
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L + +V P++ G KY L H G + GHYT+ R + QW H DD V+ +
Sbjct: 402 LDIA-PYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQL 460
Query: 355 SKVLHDQ-AYVLFYKQV 370
+VL+D+ AY+L Y +V
Sbjct: 461 EQVLNDKTAYLLSYIRV 477
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 155/377 (41%), Gaps = 71/377 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 65 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 103
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 131
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 104 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 161
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-------LPSA 184
+ NTAL L + V P N T S S
Sbjct: 162 ALQ----------------NTALAKLPK-----CVLPYNHRKFAHTTSRDTPEKIKHTSW 200
Query: 185 LSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 241
+ I+GG+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 201 VYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDRLEGDN 260
Query: 242 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQ 294
Y A KS KI IL LHL RFS G + K ++ ++F
Sbjct: 261 KYHCERCKRK--ANATKSFKIDQAPPILTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQT 318
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L + +V P++ G KY L H G + GHYT+ R + QW H DD V+ +
Sbjct: 319 LDIA-PYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDEVSPVQL 377
Query: 355 SKVLHDQ-AYVLFYKQV 370
+VL+D+ AY+L Y +V
Sbjct: 378 EQVLNDKTAYLLSYIRV 394
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 153/344 (44%), Gaps = 56/344 (16%)
Query: 26 CFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNIS 85
CFLN LQ ++ P L+ +LR D P P A +GF + N S
Sbjct: 2 CFLNCILQCMVHTVP---LVLKLRKTDHPD---PCPRASIGFCC-----YCSLKQHVNES 50
Query: 86 VLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGEST 145
+ G F P +F LK+ + D + + Q+DAQEFL ++D++ DE
Sbjct: 51 IRLSGSSFYPEIFINRLKSISSDFKSGV-----QQDAQEFLRCLLDKL-DE--------- 95
Query: 146 SINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKA 204
+++ P++ + T+ S + +IF G LKS ++ + ++
Sbjct: 96 ------------------DSIAPRSSEESSTTKE--GSVVKEIFRGCLKSQLRCPECDRC 135
Query: 205 SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTL 264
S +PFL L LD+ V T+ DAL+ F+ E ++ + G V+ +K KI+
Sbjct: 136 SDKSEPFLDLSLDL--NMVETLMDALQSFTNTELIKDFMCD--GCKSRVSMEKHFKIEQA 191
Query: 265 SKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-KYELVATVTHHGR 323
++L++HL RF + +K+ V++PL+L + + + KY+L V H G
Sbjct: 192 PEVLVIHLKRF---TNSESKIWDKVKYPLELDINSFMSSSDDVSCSFKYDLYGVVEHLGA 248
Query: 324 DPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
S GHY R W F+D V L + AY+LFY
Sbjct: 249 YGS-GHYVCYIRSSEADWYKFNDDKVYQCSVDSALENAAYLLFY 291
>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 160/374 (42%), Gaps = 66/374 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 135
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 136 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
E K + ++ + TA+ + AE D NK+ T + DIF G L
Sbjct: 137 QEEKKQEKQNGRLKNNGTAVATEAETD--------NKAEST--------WVHDIFQGTLT 180
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|348572270|ref|XP_003471916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cavia
porcellus]
Length = 1077
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 157/358 (43%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI ++ L G V++ F
Sbjct: 737 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN---LLGHKGEVAEEFGI-- 791
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L G R SP F+ + + +G Q+D+QE L F+MD +
Sbjct: 792 -------IMKALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGL 839
Query: 134 HDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
H++L K N L A E W+ N+S + +F GQ
Sbjct: 840 HEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQ 888
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNA 250
KS V+ ++ S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 889 FKSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCR 948
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +
Sbjct: 949 ARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLK 1008
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1009 KYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1065
>gi|126310809|ref|XP_001371948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Monodelphis
domestica]
Length = 564
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 162/385 (42%), Gaps = 74/385 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CFLNA LQ L S P LR RD + PSGG
Sbjct: 211 GLRNLGNTCFLNAVLQCLSSTRPLRDFC--LR-RDF----------------RLEVPSGG 251
Query: 78 SSKKKNISVL----------DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
++++ D +P+ F V + + P S SG Q+DAQEFL
Sbjct: 252 RTQQELTEAFADVLGALWHPDSCEAVNPTRFRTVFQKYVP----SFSGY-SQQDAQEFLK 306
Query: 128 FIMDQMHDELLKLQGESTSI------------NGANTALVSLAEEDE----WETVGPKNK 171
+M+++H E+ + + I GA L+++D+ W+ +
Sbjct: 307 LLMERLHLEINRRGRRAPPILTDTPAPSLPRRGGALLEEPELSDDDQANLMWKRYLDRED 366
Query: 172 SAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTI 226
S + D+F GQLKS +K Q S T + F L L I ++ ++
Sbjct: 367 SKIV-----------DLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSL 415
Query: 227 EDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKL 285
D LF+ E LE T + K + +Q +IL+LHL RFS S+GS K
Sbjct: 416 RDCFSLFTKEEELESENAPVCDRCRQRTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKK 474
Query: 286 HK-SVRFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLH 343
V FPLQ L LG + A Y+L A H G GHYTA R W
Sbjct: 475 SSVGVDFPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCRG-QTGWHV 530
Query: 344 FDDASVTAIGTSKVLHDQAYVLFYK 368
++D+ V+ + ++V + YVLFY+
Sbjct: 531 YNDSRVSPVSENQVASSEGYVLFYQ 555
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 161/362 (44%), Gaps = 67/362 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTP 74
GL N GN C++N+ +Q+L+ P F L Q+L T G P + V + +F
Sbjct: 203 GLSNYGNTCYMNSVMQSLIHTPPLAFALLTQDLETLHGEWGGKPNVNFDAVIAMQNFAKR 262
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
S ++ N +P F LK F + RQEDA E+L F+++ +
Sbjct: 263 SLQGTRPTN----------APQEFNRNLKAFAKPLRQG-----RQEDAHEYLRFLLEALQ 307
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L + A SL +D + RT + + +FGG+L+
Sbjct: 308 QACL------------SRAPKSLKPDD-----------PIRRT-----TFVQKMFGGKLR 339
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S V + S T PF+ L LD+ + ++++ DA R F A ++L G Y+
Sbjct: 340 SRVTCHNCSHNSDTFDPFMDLSLDV-RKGINSLTDAFRAFVAKDHLTGSEKYKCDKCKRK 398
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V A K I++ L +HL RF+ +G K+ + + F L + L +E
Sbjct: 399 --VDATKQFTIESCPPALTVHLKRFTAFGG----KISRQISFDESLNIAPYL-----SEN 447
Query: 310 R---KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AYVL 365
R +Y+L A V H+G P+ GHY A + +W DD+ V+ IG ++DQ AY+L
Sbjct: 448 RGPVRYKLYAAVHHYGSGPNSGHYVASVKAPCGKWTRMDDSHVSEIGRGGPVNDQSAYIL 507
Query: 366 FY 367
FY
Sbjct: 508 FY 509
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 108 bits (269), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 160/382 (41%), Gaps = 80/382 (20%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVS 69
S + GL N GN CF+NA LQ+L S L++E R TL A
Sbjct: 200 STTAICATGLRNLGNTCFMNAILQSLRS------LVEEFRK---------TLCALWQ--- 241
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
GS FSP V+ P+ +Q+DA EF+ ++
Sbjct: 242 -------GSQT-----------AFSPESLFYVVWKIMPNFRGY-----QQQDAHEFMRYL 278
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D +H L+LQG NG + + ++ +E+ ++ NK + + ++ IF
Sbjct: 279 LDHLH---LELQG---GFNGVSRS--AMLQENS--SLSASNKCCINGAST----VVTAIF 324
Query: 190 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE-------------------AVHTIEDA 229
GG L++ V S PFL L LDI S+ + + D
Sbjct: 325 GGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRAQITLVSDC 384
Query: 230 LRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKS 288
LR F+ E L E + K IQ L K+L LHL RF + + K+
Sbjct: 385 LRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRNKVDTY 444
Query: 289 VRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 345
V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +W HF+
Sbjct: 445 VEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGRWFHFN 503
Query: 346 DASVTAIGTSKVLHDQAYVLFY 367
D++VT V +AY+LFY
Sbjct: 504 DSTVTLTDEETVGKAKAYILFY 525
>gi|256088992|ref|XP_002580603.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 756
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 163/358 (45%), Gaps = 43/358 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELR-TRDIPKAGYPT---LTAFVGFVSDFDT 73
GL N GN CF+N+ LQ L + +P + E R +DI K+ ++ + +
Sbjct: 163 GLNNLGNTCFMNSILQCLSNTAPLTEYCLEDRFLKDINKSSSMNGLLFHSYADLMKEIWD 222
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P +S SPS F++ ++ F P Q+D+QEFL ++++ +
Sbjct: 223 PDMANSST------------SPSRFKSQIQRFAPRFMGY-----SQQDSQEFLRYVLEGL 265
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++Q I + E E K R S S + D+F GQL
Sbjct: 266 HMEVNRVQKRPNPI----------KPDYEAEDYNEKANLYWRRYLSMDNSEIVDLFVGQL 315
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAG 251
S ++ + + S T PF L L I ++ +I D L LF++ E L+G R +
Sbjct: 316 MSTLECGECSFKSTTFDPFWDLSLPIPKKSNVSILDCLNLFTSKEELDGNERPICSRCKT 375
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL----VTPSA 307
KS IQ +IL+LHL RFS G + +K+ V +PL+ + DL+ + +
Sbjct: 376 RRRCAKSFSIQKFPQILVLHLKRFS-GERFRSKMSVMVDYPLRNL---DLIGFATSSCTQ 431
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ +Y+L A V++H GHYTA + W F+D+ V AI + V+ + YV
Sbjct: 432 KSAQYKLYA-VSNHSGSVYTGHYTASCLNPYTGDWHSFNDSHVHAISENSVVSAEGYV 488
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 149/360 (41%), Gaps = 73/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+TLQ L +P +L ++ + G+ + + SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 77 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
K ISVL+ IG+ F F + QEDA EFL + +D
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 191
M L P NK T+ +F+ IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207
Query: 192 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S VK KA S T P+L + L+I + T+ A F PE L+G Y+ S
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+VTA K + S +L + L RF+ + G K+ K VR+ L L R +
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL-RPFMSQSHG 320
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
E + Y L A + H G GHY + N QW +D+SV+ VL+ QAY+LFY
Sbjct: 321 EPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 164/364 (45%), Gaps = 47/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVTARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + +TV PF L L I Y E T+ D +RLF+ + L+G +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 249 NAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
+ K+ +K IQ KIL+LHL RFS ++KL V FPL+ + R+ +
Sbjct: 479 HCRA--RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLRE-FASE 535
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+
Sbjct: 536 NTNHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYL 594
Query: 365 LFYK 368
LFY+
Sbjct: 595 LFYE 598
>gi|351715023|gb|EHB17942.1| Ubiquitin carboxyl-terminal hydrolase 8 [Heterocephalus glaber]
Length = 1106
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 157/358 (43%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI ++ L G V++ F
Sbjct: 766 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNYYQDDINRSN---LLGHKGEVAEEFGI-- 820
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L G R SP F+ + + +G Q+D+QE L F+MD +
Sbjct: 821 -------IMKALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGL 868
Query: 134 HDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
H++L K N L A E W+ N+S + +F GQ
Sbjct: 869 HEDLNKADNRKRHKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQ 917
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNA 250
KS V+ ++ S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 918 FKSTVQCLTCHRKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCR 977
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +
Sbjct: 978 ARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKHSLK 1037
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1038 KYSLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1094
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/372 (28%), Positives = 166/372 (44%), Gaps = 60/372 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125
Query: 137 LL--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+L + G ST A A+ GP ++ T+ P+ + +IF G L
Sbjct: 126 ILAERNTGSSTGKTAAGGAI-----------PGPNAQTNGANTE---PTWVHEIFQGILT 171
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGV 252
S + S+ + F L +D+ +I LR FS E L N
Sbjct: 172 SETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSY 229
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAE 308
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P
Sbjct: 230 QEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD-- 287
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---------LH 359
R Y+L A V H G P++GHY + + + WL FDD V I S + +H
Sbjct: 288 -RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIH 345
Query: 360 ---DQAYVLFYK 368
+ Y+LFY+
Sbjct: 346 KSSETGYILFYQ 357
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 149/360 (41%), Gaps = 73/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+TLQ L +P +L ++ + G+ + + SG
Sbjct: 84 GLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 77 GSSKKKNISVLD----IGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
K ISVL+ IG+ F F + QEDA EFL + +D
Sbjct: 144 NVIKP--ISVLNELKRIGKHF---RFGS------------------QEDAHEFLRYTVDA 180
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGG 191
M L P NK T+ +F+ IFGG
Sbjct: 181 MQKSCL-----------------------------PGNKLDRQTQATTFV----HQIFGG 207
Query: 192 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S VK KA S T P+L + L+I + T+ A F PE L+G Y+ S
Sbjct: 208 YLRSRVKCLNCKAVSDTFDPYLDISLEI--KTAQTLSKAFEQFVKPEQLDGDNAYKCSKC 265
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+VTA K + S +L + L RF+ + G K+ K VR+ L L R +
Sbjct: 266 --KKMVTASKRFTVHRSSNVLTISLKRFTNFNGG--KITKDVRYAEHLDL-RPFMSQSHG 320
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
E + Y L A + H G GHY + N QW +D+SV+ VL+ QAY+LFY
Sbjct: 321 EPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLFY 380
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 165/403 (40%), Gaps = 89/403 (22%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
KS K+ GL N GN CF+N LQ+ + S F + L ++ P L
Sbjct: 236 KSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQM----------PCLEGIA--- 282
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-----GR------- 116
FD +G + + I + GR SM +A+L V +S G+
Sbjct: 283 --FDESTGPPTHRGRI--VTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECL 338
Query: 117 --------PR-----QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 163
PR Q+DA EFL++++D++H ELL+L L L
Sbjct: 339 FLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQL-------------LPRLGH---- 381
Query: 164 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---- 218
E +G + K ++ ++ +FGG L SVV + S T +PF L LDI
Sbjct: 382 EPLGLRGKQSI----------VTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRL 431
Query: 219 ------YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILH 271
E V ++ +L F E L N G + K I L +L LH
Sbjct: 432 QRSRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLH 491
Query: 272 LMRFSYGSQGSTKLHKSVRFPLQ-------LVLGRDLLVTPSAEGRKYELVATVTHHGRD 324
+ RF + + +K+ V FP++ V G + Y+L A + HHG
Sbjct: 492 IKRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGVTGTRLGAQNSHLYDLAAVIVHHGSG 551
Query: 325 PSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
GHYTA A + + QW HF+D+SV T V + Y+LFY
Sbjct: 552 AGTGHYTAFAVH-DGQWFHFNDSSVRPATTDAVAKCKPYILFY 593
>gi|146161769|ref|XP_001033384.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|146142812|gb|EAR85721.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 686
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 164/376 (43%), Gaps = 57/376 (15%)
Query: 5 NEPVKSVKDLL--PRGLINSGNLCFLNATLQALMSCSP-----FVQLLQELRTRDIPKAG 57
N+P K +K LL P L N+ N C++NA LQ+++S F ++ E + + I K
Sbjct: 358 NDPSK-LKKLLFRPYRLENNSNYCYMNACLQSILSIGELNTYFFDKMYLEYKDQ-ITKKP 415
Query: 58 YPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAV-LKNFTPDVPNSISGR 116
+ A+ ++ F + + SPS+F+ +NF P+
Sbjct: 416 HKFTIAYSDLLTRFQKSNSN-------------QIISPSLFKKYSQQNFDPN-------- 454
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
Q DAQE+L F++ ++ DEL + N + + K
Sbjct: 455 -EQHDAQEYLRFVLGEIQDEL--------NFPLPNKRPAEFKDSQQASKFYFK------- 498
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ S + +F GQL S V+ Q K S+T PFL L L I S+++ + + LF
Sbjct: 499 ---YHTSIVDRLFCGQLISKVQCQKCKYISSTFDPFLDLSLPIESKSLKDLNSCMDLFFK 555
Query: 236 PENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 294
PE ++G Y+ A KS ++ + K L++HL RF TK+ + + +P
Sbjct: 556 PEEIDGEYKCEKC--TKTSRAIKSCQLGNIPKYLVIHLKRFKMFPY-KTKIKQQISYPST 612
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L + + E KY L + H G GHY + + +++W + DD S+
Sbjct: 613 LDISK-YYANSGNESTKYSLNGVIIHQGS-ADIGHYVSFNKRNDNKWFYCDDESIQECSN 670
Query: 355 SKVLHDQAYVLFYKQV 370
L +AY+LFY+++
Sbjct: 671 KDALDQEAYLLFYEKI 686
>gi|302795107|ref|XP_002979317.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
gi|302813882|ref|XP_002988626.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300143733|gb|EFJ10422.1| hypothetical protein SELMODRAFT_128261 [Selaginella moellendorffii]
gi|300153085|gb|EFJ19725.1| hypothetical protein SELMODRAFT_153173 [Selaginella moellendorffii]
Length = 369
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 165/381 (43%), Gaps = 49/381 (12%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 63
K++ D P G L N GN C+ N+ LQAL C PF L E +R +G P
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFRDQLLEYYSR-TKSSGEPEENL 68
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
F S +S+KK V+ +P F +K N + +DA
Sbjct: 69 LTCLADLF---SQINSQKKKTGVI------APKRFVQRVKK-----QNELFRSYMHQDAH 114
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL+F+++++ + L K + +G + AE+ E G N +A + +
Sbjct: 115 EFLNFLLNELVETLEKEAKSGRTASGN----LKPAEKKE---NGVANGTAADQDHPL--T 165
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ IF G L + + + +A + FL L LDI E +I LR FS+ E L
Sbjct: 166 WVHKIFQGFLTNETRCLRCETITARDEKFLDLSLDI--EQNSSITSCLRNFSSTETLNAE 223
Query: 243 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 299
+ + A+K +KI+T +IL LHL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKTPPRILALHLKRFKYIEQLGRYKKLSYRVVFPLELKLCN 283
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 358
P +E +Y L A V H G P+ GHY + + + WL FDD +V I + V
Sbjct: 284 TTDDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKS-HSHWLFFDDENVEIIDETYVQT 341
Query: 359 -----------HDQAYVLFYK 368
D Y+LFY+
Sbjct: 342 FFGSTQEYSNNTDHGYILFYE 362
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 154/380 (40%), Gaps = 60/380 (15%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
KS KD GL N GN CF+NA LQ+L + F +L + ++ G +
Sbjct: 216 KSQKDKKIVGLKNLGNTCFMNAVLQSLNNIQEFSYYFSQLPSLEMKTNGRKVYHSRSYTR 275
Query: 69 SDFDTPSGGSSKKKNISVLDIG-----RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
+ +K + L+ G SP V+ P +Q+DA
Sbjct: 276 QEMHDVVMAEELRKVLINLNTGGCGSKAAISPECLFLVIWKVVPRFRGY-----QQQDAH 330
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL +++D++H EL +L P V S + +
Sbjct: 331 EFLRYMLDRLHTELQQLV--------------------------PDRPEGVKAPASIVTA 364
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH----TIEDALRLFSAPEN 238
+FGG L+S V+ S PFL L L++ H ++ D L F E
Sbjct: 365 ----VFGGTLQSEVRCLACGTESKKFDPFLDLSLELPESGRHDAPVSLTDCLASFVQIEE 420
Query: 239 L---EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
L E Y SS T K I+ L +L LHL RF + + TK+ S+ FPL L
Sbjct: 421 LADTERYFCSSCKCKQKST--KQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPL-L 477
Query: 296 VLGRDLLVTPSA-----EGRK---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA 347
L V P+ GR Y+L A + HHG GHYTA A +QW HF+D
Sbjct: 478 SLDMSGFVLPNVPDTRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAFA-INEEQWFHFNDQ 536
Query: 348 SVTAIGTSKVLHDQAYVLFY 367
+V A ++ V + Y+LFY
Sbjct: 537 TVRATDSAAVASCKPYILFY 556
>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
Length = 377
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 162/369 (43%), Gaps = 54/369 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + E + ++ + LT S
Sbjct: 39 GLVNFGNTCYSNSVLQALYFCRPFRDRVLEYKAKN-KRTKETLLTCLADLFY-----SIA 92
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 93 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 140
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +ST + L + D + N S T+ P+ + +IF G L S
Sbjct: 141 LAERNQST---------LKLQKTDGVKENVTCNGSIPQNTE---PTWVHEIFQGTLTSET 188
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV-TA 255
+ S+ + F L +D+ +I L+ FS E L N A
Sbjct: 189 RCLNCETVSSKDEHFFDLQVDVDQNT--SITHCLKCFSDTETLCNDNKFKCDNCSSYQEA 246
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 247 QKRMRVKKLPLILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 303
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 304 YDLVAVVVHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSS 362
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 363 ETGYILFYQ 371
>gi|357143206|ref|XP_003572840.1| PREDICTED: uncharacterized protein LOC100831961 [Brachypodium
distachyon]
Length = 712
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 156/360 (43%), Gaps = 67/360 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CFLNATLQ + P L ++LR+ D P F F +
Sbjct: 171 GLRNMGNTCFLNATLQCITHTVP---LFKKLRSTDHPTPCSYDEDGFCSFCA-------- 219
Query: 78 SSKKKNI--SVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFIMDQMH 134
K++I S+ G P+ F+ L++ + RP +QEDA EFL ++D +H
Sbjct: 220 --LKEHIEESIRRSGSVLMPARFKDNLRSI-------LYFRPGQQEDAHEFLRCLLDNLH 270
Query: 135 DELL--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
L K +G+ +S + +S V R +FGGQ
Sbjct: 271 KCTLDPKSKGKPSSFD---------------------EESIVKR-----------VFGGQ 298
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTG 248
LKS + + S T +PFL L L+I + V + AL F+ E + E T +
Sbjct: 299 LKSQLTCRECGHCSETSEPFLDLSLEI--DQVDDLVAALESFTKVEEIGDAENKLTCESC 356
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP-SA 307
N V K+ + +T ++ L RF+ K+ K V +P +L L + P S
Sbjct: 357 NVQVCKGKRLLLDKT-PDVIAFQLKRFTTLDHSIEKIDKHVAYPSELDL-KPFHSNPVSE 414
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
E KY+L V H G P+ GHY R W +D+ V +I + LH +AY+LFY
Sbjct: 415 EELKYDLYGVVEHSGL-PNYGHYVCAIRSSPSTWHLMNDSQVDSITETSALHQEAYILFY 473
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 113/385 (29%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L E T +++ A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYTNNKNLADAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFMQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D L K S S ++ A GPK A + L
Sbjct: 113 AHEFLNFLLNELVDILEKEASASKSDPETSSPPEKTAN-------GPKTAQANGVQKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADSEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESSV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESL 363
>gi|442753601|gb|JAA68960.1| Putative ubiquitin-specific protease [Ixodes ricinus]
Length = 400
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 174/394 (44%), Gaps = 64/394 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK ++ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 79 NQKKKTGTI-------APKKFIARLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 126
Query: 138 L---KLQGESTSINGANTALVSLAEED--------EWETVGPKNKSAV-----TRTQSF- 180
+ QG+S + ++ S +++ T+G N++ T+ QS
Sbjct: 127 QAEKQTQGQSNAKGNKCSSATSASDQQGSHTPQQQTTTTLGAPNQATATAAAGTQPQSNP 186
Query: 181 -----LPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFS 234
P+ + DIF G L + + S+ + FL L +D+ +I LR FS
Sbjct: 187 QPHKPEPTWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFS 244
Query: 235 APENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRF 291
E L ++ A+K ++++ L IL LHL RF Y Q + TKL V F
Sbjct: 245 NTETLCSEHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVF 304
Query: 292 PLQLVLGRDLLVTPSAE-----GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDD 346
PL+L L L + +++ R Y+LVA V H G P++GHY + + + WL FDD
Sbjct: 305 PLELRLFNKLRLFNTSDDAFNPDRMYDLVAVVIHCGSGPNRGHYISIVKS-HGLWLLFDD 363
Query: 347 ASVTAIGTSKV------------LHDQAYVLFYK 368
V I + + + Y+LFY+
Sbjct: 364 DIVDKIDAAAIEDFYGLTSDTPKTSESGYILFYQ 397
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 167/387 (43%), Gaps = 61/387 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 71
GL N GN CFLN +Q L S P + L T + G + + D
Sbjct: 224 GLYNMGNTCFLNTAVQCLSSVQPLTDFFIGNLHKKLLNTTNPMGTGGDVTLRYANLIKDI 283
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
G +K P+ F LK + P+ + G+ Q+DAQEFL++I+D
Sbjct: 284 ---WQGKEEK-----------IYPAQF---LKTLSKHAPHLVCGQ--QQDAQEFLAYILD 324
Query: 132 QMHDELLK--------------LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+H++L + L +S+ ++ L L + D E + + A
Sbjct: 325 SLHEDLNRADKLTNMKQKREKELSKKSSKNEDEDSLLDKLLDTDPSEEL--QEHQAYESW 382
Query: 178 QSFL---PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALR 231
+ L S + D+F GQLKS +K N S F+ L + I + + +E+ +
Sbjct: 383 KDHLLNNRSIIVDLFQGQLKSTLKCLVCNHMSIKFDSFMYLTIPIPQKMMSDPKLEECVE 442
Query: 232 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
F+ E L+G A K + I L +LI++L RF + + K++ V
Sbjct: 443 EFTKEEILDGQNKWKCPKCDKFQRATKKIDIWKLPSVLIINLKRFEFNQKKKAKINDLVE 502
Query: 291 FPLQLVLGRDLLVTP-----SAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHF 344
FPL ++L +TP E Y+L A H G + GHY + +++ N+ QW +F
Sbjct: 503 FPL-----KNLDLTPYVSKLQREKPIYDLFAVANHEGY-LTGGHYYSYSKHRNNQQWYYF 556
Query: 345 DDASVTAI-GTSKVLHDQAYVLFYKQV 370
DD V I KV+ +AY+LFY ++
Sbjct: 557 DDEVVKKIKNEEKVVSKEAYILFYSKM 583
>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
Length = 363
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 163/370 (44%), Gaps = 53/370 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 75
GL+N GN C+ N+ LQAL C PF + L + R+ K T A D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREQVLSYKQHMRNSKKETLLTCLA--------DLFH 76
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
+++KK + + +P F L+ N + Q+DA EFL+++++ + D
Sbjct: 77 NIATQKKKVGTI------APKKFIQRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD 125
Query: 136 ELLKLQGESTSINGANTA-LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
LQGE+ + G A V+ A +KS P+ + +IF G L
Sbjct: 126 ---LLQGENKQLKGGGKANAVNGATNHHQGNFHDNSKSD--------PTWVHNIFQGTLT 174
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS+ E L Y+
Sbjct: 175 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSSTETLCSEYKYYCEVCCSK 232
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
A+K ++++ L IL LHL RF Y Q + TKL V FPL+L L + S R
Sbjct: 233 QEAQKRMRVKKLPHILALHLKRFKYMEQLNRYTKLSYRVVFPLELRLF-NTSDDASNPDR 291
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH----------- 359
Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 292 LYDLIAVVIHCGTGPNRGHYISIVKS-HGLWLLFDDDIVDKIEVSAIEEFYGMTSDLQKS 350
Query: 360 -DQAYVLFYK 368
+ Y+LFY+
Sbjct: 351 SESGYILFYQ 360
>gi|31873342|emb|CAD97662.1| hypothetical protein [Homo sapiens]
Length = 1118
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 154/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGKIN----DQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRAFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 160/367 (43%), Gaps = 63/367 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + + PK LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKVLQYKAQ--PKKKETLLTCLS------DLFHSI 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 77 ATQKKKVGVI------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTVADLL 125
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ ++ ING + T++ P+ + DIF G L +
Sbjct: 126 QAEKQQAKGINGTDNN---------------------TKSD---PTWVHDIFQGTLTNET 161
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ + +I LR FS E L Y+ A
Sbjct: 162 RCLCCETVSSKDEDFLDLSVDV--DQNTSITHCLRGFSNTETLCSEYKYYCEMCCSKQEA 219
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
+K ++++ L IL LHL RF Y Q TKL V FPL+L L +A+ + Y+
Sbjct: 220 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLELRLFNTSDDAVNAD-KIYD 278
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV------------LHDQ 361
LVA V H G P++GHY + + WL FDD V I + +
Sbjct: 279 LVAVVIHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAHAIEDFYGLTSDIQKTSES 337
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 338 GYILFYQ 344
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 163/363 (44%), Gaps = 54/363 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+N+ LQ L + +ELR + + +V D S
Sbjct: 269 GLRNLGNTCFMNSILQCLSNT-------RELRDYCLHRL----------YVRDLHHGSNA 311
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ + S ++ SPS F+ ++ + P Q+DAQEFL F++D +H+E+
Sbjct: 312 HTALREASPNEV---VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEV 363
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
++ T +N + +DE K + + S + D+F GQLKS +
Sbjct: 364 NRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSL 413
Query: 198 KAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAG 251
+TV PF L L I Y E T+ D +RLF+ + L+G + + G
Sbjct: 414 TCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCRG 471
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 472 RKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHAV 530
Query: 312 YELVATVTHHGRDPSKGHYTADARYFN------DQWLHFDDASVTAIGTSKVLHDQAYVL 365
Y L A H G GHYTA Y N +W F+D+SVT + +S+V AY+L
Sbjct: 531 YNLYAVSNHSGTT-MGGHYTA---YSNCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLL 586
Query: 366 FYK 368
FY+
Sbjct: 587 FYE 589
>gi|93279989|pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin
Carboxyl-terminal Hydrolase 8
Length = 396
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+ N+ LQ L + + DI ++ +G + G
Sbjct: 64 GLRNLGNTCYXNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 117
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+ D +H
Sbjct: 118 IIXK-----ALWTGQYRYISPKDFKITIGK----INDQFAGYS-QQDSQELLLFLXDGLH 167
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 168 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 216
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F L L + S + T++D LRLFS E L + R +
Sbjct: 217 KSTVQCLTCHKKSRTFEAFXYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 276
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 277 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 336
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 337 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 392
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 173/375 (46%), Gaps = 45/375 (12%)
Query: 8 VKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPTLT 62
+ K+ P GL+ N GN CF+N LQ L S +P ++ L + D+ T
Sbjct: 38 INQAKNKRPHGLVGLRNLGNTCFMNTILQCL-SNTPDLRDYCLTNVHRLDLGD----NCT 92
Query: 63 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
A + +F + +++ + SPS ++ + P Q+DA
Sbjct: 93 ANTTLMEEF------AKLIQSLCLSGSNEAISPSDVWKQIQQYGPKFVGC-----NQQDA 141
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP 182
QEFL F++D +H++ +N A+ +++ K+K
Sbjct: 142 QEFLRFLLDGLHND----------VNRASVLPKVSGHDNDHLGDDEKSKRMWNLYLERED 191
Query: 183 SALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPE 237
S + D+F GQLKS V ++TV PF L + I SE V T++D LRLF+ +
Sbjct: 192 SKVVDLFVGQLKSSVTCTFCGFTSTVFDPFWDLSIPIPAQKSSEEV-TLKDCLRLFTKED 250
Query: 238 NLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 294
L+G S + +K K IQ +IL+LHL RFS S ++KL V FPL+
Sbjct: 251 VLDG--DESPMCCRCKSRRKCTKRFSIQRFPQILVLHLKRFSDSSVRTSKLSTYVNFPLK 308
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIG 353
+ R+ T E Y+L A V++H + GHYTA R+ + +W ++D+ V+ +
Sbjct: 309 ELEMRE-FATTGGERVTYDLYA-VSNHSGNAMGGHYTAYCRHPSLGEWYSYNDSRVSPVS 366
Query: 354 TSKVLHDQAYVLFYK 368
T+ + AY+LFY+
Sbjct: 367 TANIRSSNAYLLFYE 381
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 138/293 (47%), Gaps = 39/293 (13%)
Query: 93 FSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 151
FSP S+F V K +PN G +Q+DA EF+ +++D +H L+LQG NG +
Sbjct: 218 FSPESLFYVVWK----IMPN-FRGY-QQQDAHEFMRYLLDHLH---LELQG---GFNGVS 265
Query: 152 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQP 210
+ + L E T+ NK + + ++ IFGG L++ V S P
Sbjct: 266 RSAI-LQENS---TLSASNKCCINGA----STVVTAIFGGILQNEVNCLICGTESRKFDP 317
Query: 211 FLLLHLDIYSE------------AVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKK 257
FL L LDI S+ V ++ D LR F+ E L E + K
Sbjct: 318 FLDLSLDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTK 377
Query: 258 SVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YEL 314
IQ L K+L LHL RF + + K+ V FPL+ + + L+ P G + Y+L
Sbjct: 378 KFWIQKLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDL 437
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V HHG GHYTA A + +W HF+D++VT V+ +AY+LFY
Sbjct: 438 AAVVVHHGSGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 489
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 146/354 (41%), Gaps = 61/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L +PF +L ++ + G+ + + SG
Sbjct: 84 GLQNMGNTCFLNSALQCLTYTAPFSNYMLTREHSKTCHEPGFCMMCTMQNHIIQVFANSG 143
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 144 NVIKP--IGVLN--------ELKRIAKHFRYGS---------QEDAHEFLRYTVDAMQKS 184
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGGQLKS 195
L P K T+ +F+ +FGG L+S
Sbjct: 185 CL-----------------------------PGTKLDRQTQATTFI----HQVFGGYLRS 211
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVV 253
VK KA S T PFL + L+I + ++ AL F PE L+G T +V
Sbjct: 212 RVKCLNCKAVSDTFDPFLDIPLEI--KTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMV 269
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA K I + +L L L RF+ S G K+ K V++P L L R + E + Y
Sbjct: 270 TASKRFTIHRSANVLTLALKRFANFSGG--KITKDVKYPEYLDL-RPFMSQSQGEPQVYG 326
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + N QW +D+SV+ VL+ QAYVLFY
Sbjct: 327 LYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLNQQAYVLFY 380
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 155/359 (43%), Gaps = 61/359 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSP--FVQLLQELRTRDIPKAGYPTLT-AFVGFVSDFDTP 74
GL N GN C++N+ +Q+L+ P F L Q+L G P T V + F
Sbjct: 199 GLANYGNTCYMNSVMQSLIHTPPLAFALLTQDLDALHGELGGKPNATFDAVTAMHAFTRA 258
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
S SK N +P F LK F + RQEDA E+L F+++ +
Sbjct: 259 SLMGSKPTN----------APKEFNRNLKAFAKPLRQG-----RQEDAHEYLRFLLEALQ 303
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L A SL +D + RT + + +FGG+L+
Sbjct: 304 QSCLA------------RASKSLKPDD-----------PIRRT-----TFVQKMFGGKLR 335
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S V S T PF+ L L++ + + ++ DA R F A ++L G Y+
Sbjct: 336 SRVTCHSCGHNSDTFDPFMDLSLEV-RKGITSLTDAFRAFVAKDHLTGSEKYKCDKCKRK 394
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V A K I+ L +HL RF+ +G K+ + + F L + L V
Sbjct: 395 --VDATKQFTIEAAPPALTVHLKRFTAFGG----KVSRQINFDESLNIAPYLSVNRGPA- 447
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-AYVLFY 367
+Y+L A V H+G P+ GHY A R + +W DD+ V+ +G S L+DQ AY+LFY
Sbjct: 448 -RYKLYAVVHHYGSGPNSGHYVASVRSPSGKWTRMDDSLVSEMGRSGPLNDQSAYILFY 505
>gi|154418012|ref|XP_001582025.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121916257|gb|EAY21039.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 363
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 153/364 (42%), Gaps = 65/364 (17%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLL----QELRTRDIPK-AGYPTLTAFVGFV 68
L P GL+N G +CF NA+LQ L S FV + +R I + A PT +A F
Sbjct: 58 LPPNGLLNKGLMCFANASLQLLFSSKEFVSFILFMKNNMRFFSIAQLASAPTWSALCKFA 117
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ T +K IS + F P F + T EDA EF F
Sbjct: 118 RSYAT------EKNIISTESMDEFFGP--FTSKRHPLT------------MEDAAEFTMF 157
Query: 129 IMDQMHDELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+++++HDEL +L G+ G W+ G K+ + S ++
Sbjct: 158 LLNKLHDELQELIKLGDIKQDAGG------------WQAKGIKSGRITVSDECVKRSPIT 205
Query: 187 DIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
IFG +++ + G+ S +P+L+L LD+ +IE+ L+ +
Sbjct: 206 HIFGTIVRADTLSNGHSRSVGHEPYLVLPLDLSPTLEESIENFLKFSDVDDG-------- 257
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
T+KK+ + S I+I L RF++ G K +++P +L L +
Sbjct: 258 -------TSKKNSFLSLPSSIVIA-LKRFAFDGTGVIKRDDIIKYPSKLRLLK------- 302
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
+EL A V H G P+ GHY ++ + W +DD+ V I + QAY+L
Sbjct: 303 ---TDFELAAIVIHIGSSPASGHYICISKRTDGHWREYDDSDVYGIRDGTEMEQQAYLLL 359
Query: 367 YKQV 370
Y +V
Sbjct: 360 YNRV 363
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 160/379 (42%), Gaps = 68/379 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + ++ + LT S
Sbjct: 323 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN-KRTKETLLTCLADLFY-----SIA 376
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 377 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 424
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL----------PSALSD 187
L E GA T+ G KN + L P+ + +
Sbjct: 425 L---AERNQAKGAGTS-------------GSKNAGTIGGGGGSLNGDNPGQPQEPTWVHE 468
Query: 188 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 469 IFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFK 526
Query: 247 TGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDL 301
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 527 CDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDD 586
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-- 359
V P R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 587 AVNPD---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFY 642
Query: 360 ----------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 643 GLTSDIQKSSETGYILFYQ 661
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 151/366 (41%), Gaps = 61/366 (16%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
KD P GL+N GN CF N LQ L P L E R+ + F +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
T +S+ +PFSP+ L N ++ G RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+M LA DE+ G K A +R + + IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315
Query: 192 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 249
QL+S V+ N S + + L ++I+ +A ++E+ L F+ E L G + G
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V A K + I+ IL + L RF G G KL+K V FP L DL S G
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETL----DLSPYMSEAG 428
Query: 310 RK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L A V H + GHY + F+ W DD V + +VL AY+
Sbjct: 429 DRKDVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYM 488
Query: 365 LFYKQV 370
+ Y +V
Sbjct: 489 ILYSRV 494
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 151/366 (41%), Gaps = 61/366 (16%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
KD P GL+N GN CF N LQ L P L E R+ + F +F
Sbjct: 183 KDFHPCGLLNCGNSCFANVVLQCLSFTRPLFAFLLEKGHRN------ECVRDDWCFFCEF 236
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
T +S+ +PFSP+ L N ++ G RQEDA EF+ F +D
Sbjct: 237 QTHVERASQN--------AQPFSPNNIILRLPNIGGNL-----GYGRQEDAHEFMRFAID 283
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+M LA DE+ G K A +R + + IFGG
Sbjct: 284 RMQ----------------------LACLDEFG--GEKAVCAHSRETTIIQH----IFGG 315
Query: 192 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 249
QL+S V+ N S + + L ++I+ +A ++E+ L F+ E L G + G
Sbjct: 316 QLQSQVICTNCNNVSNQHENMMDLTVEIHGDAA-SLEECLDQFTKIEWLHGDNKYKCDGC 374
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V A K + I+ IL + L RF G G KL+K V FP L DL S G
Sbjct: 375 NDYVKASKRLTIKQAPNILTIALKRFQSGRFG--KLNKKVAFPETL----DLSPYMSEAG 428
Query: 310 RK---YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L A V H + GHY + F+ W DD V + +VL AY+
Sbjct: 429 DRKDVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYM 488
Query: 365 LFYKQV 370
+ Y +V
Sbjct: 489 ILYSRV 494
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 387
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 161/384 (41%), Gaps = 57/384 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCKPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK ++ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 79 NQKKKTGTI-------APKKFIARLRK-----ENELFDNYMQQDAHEFLNYLLNTIADIL 126
Query: 138 L--KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL-------------P 182
K Q + S A S + + G SA Q P
Sbjct: 127 QAEKQQQQQNSQTNAKGNKCSSSGDTAHNAAGGPMASAGATAQCMQNQVGGTAQPPKPEP 186
Query: 183 SALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-E 240
+ + DIF G L + + S+ + FL L +D+ +I LR FS E L
Sbjct: 187 TWVHDIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVSQNT--SITHCLRGFSNTETLCS 244
Query: 241 GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL- 297
++ A+K ++++ L IL LHL RF Y Q + TKL V FPL+L L
Sbjct: 245 EHKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYTEQQNRHTKLSYRVVFPLELRLF 304
Query: 298 -GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
D P R Y+LVA V H G P++GHY + + + WL FDD V I S
Sbjct: 305 NTSDDAYNPD---RMYDLVAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDIVDKIDASA 360
Query: 357 V------------LHDQAYVLFYK 368
+ + Y+LFY+
Sbjct: 361 IEDFYGLTSDTPKTSESGYILFYQ 384
>gi|115640606|ref|XP_784858.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8
[Strongylocentrotus purpuratus]
Length = 1187
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 158/366 (43%), Gaps = 53/366 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ------LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
GL N GN CF+N+ +Q L + +P + LQ++ + G F V
Sbjct: 851 GLRNLGNTCFMNSVVQCLSNTTPLAKYFITDDYLQDINRANPLGRGGEVAEEFAVVVR-- 908
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ S + ++I+ D+ + + P+ + D+QEFL F++D
Sbjct: 909 ---ANWSGQYRSIAPRDL---------RDTVTKYVPEFRKHVG---HHHDSQEFLLFLLD 953
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEED-------EWETVGPKNKSAVTRTQSFLPSA 184
+H++L +++ + EED E + +N + R S
Sbjct: 954 GLHEDLNEVKKRQY-----------IKEEDFSKYPDHEAAGLSWRNHEKLNR------SI 996
Query: 185 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR 243
+ +F GQ KS V+ N S + F+ L L I S++ ++ + L+ FS PE L G
Sbjct: 997 IVSLFQGQFKSTVRCLSCNNKSVKFEAFMYLSLPIASKSKCSLHECLQQFSKPEELTGDN 1056
Query: 244 -TSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 302
T T G ++K++ I L IL++HL RF Y KL +V FP L + R +
Sbjct: 1057 ATHCTHCKGNRKSEKTILIWKLPHILLIHLKRFYYEGMWRQKLQTNVDFPNDLTMDR-YV 1115
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQ 361
+ P A+ Y+L H G GHYTA R N +W +DD V S +
Sbjct: 1116 IGP-AQRNIYQLYGVSNHSG-TLDGGHYTACCRNAVNKRWYKYDDHEVYDASKSSIKSSA 1173
Query: 362 AYVLFY 367
AY+LFY
Sbjct: 1174 AYILFY 1179
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 157/371 (42%), Gaps = 59/371 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N C+ NATLQ L+ P +++ LT G S
Sbjct: 112 GLHNPSMACYANATLQVLLHTPPVLRI---------------ALTHDEGSCSQI------ 150
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 131
KKKN +L + + + K + P + S+S + RQED EF F+ D
Sbjct: 151 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRSLSQIKKGFSKNRQEDTHEFFRFVTD 208
Query: 132 QMHD-ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
+ + L KL + N A + D E + K+ S V R I+G
Sbjct: 209 ALQNTALAKLPKSVLHYHQQNFAHKT--SRDIPEKI--KHTSWVYR-----------IWG 253
Query: 191 GQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSS 246
G+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG Y
Sbjct: 254 GRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCER 313
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQLVLGRD 300
A KS KI IL LHL RFS G + K ++ ++F L +
Sbjct: 314 CKRK--ANATKSFKIDQAPPILTLHLKRFSVNYNHYSGRARAEKFNQPIKFEQTLDIA-P 370
Query: 301 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD 360
+V P + G KY L H G + GHYT+ R + QW H DD V+ + +VL+D
Sbjct: 371 YMVNPGSSGTKYRLFGVTCHRGTELRFGHYTSYVRGPSGQWFHADDDDVSPVQLVQVLND 430
Query: 361 Q-AYVLFYKQV 370
+ AY+L Y +V
Sbjct: 431 KTAYLLSYIRV 441
>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 366
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 167/393 (42%), Gaps = 70/393 (17%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPF-VQLLQEL-RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF QLLQ + ++I A L
Sbjct: 10 KALGDNFPEGEHYFGLENFGNTCYCNSVLQALYFCVPFREQLLQYYGKNKNITDAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+K+ V+ +P F LK N + +D
Sbjct: 70 TCLAELFSQI------SSQKRKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETV--------GPKNKSA 173
A EFL+++++++ D L + + AE+D+ T+ GPK+ A
Sbjct: 113 AHEFLNYLLNELVDILER---------------EAHAEKDDQGTLLPSEKIANGPKSGLA 157
Query: 174 VTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRL 232
++ L + + F G L + + Q +A + F L LDI E +I L+
Sbjct: 158 NGAKKAPLATWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKN 215
Query: 233 FSAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSV 289
FS+ E L + + A+K +KI+ ++L++HL RF Y Q KL V
Sbjct: 216 FSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKYMEQLGRYKKLSYRV 275
Query: 290 RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV 349
FPL+L L T +Y L A V H G P+ GHY + N WL FDD +V
Sbjct: 276 VFPLELRLSD----TDEEADIEYSLFAVVVHVGSGPNHGHYVCLVKNHN-HWLCFDDETV 330
Query: 350 TAIGTSKVL------------HDQAYVLFYKQV 370
+ + V D Y+LFY+ +
Sbjct: 331 EVVDEASVQTFFGSTQDFNNNTDHGYILFYESI 363
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 149/356 (41%), Gaps = 33/356 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQE-LRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI + +G + G
Sbjct: 751 GLRNLGNTCYMNSILQCLCNTPALAEYFNNNCYLEDINRHN------ILGHKGEVAEEFG 804
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + N Q+D+QE L F+MD +H
Sbjct: 805 VIMK-----ALWAGLYKCISPRDFKITIGKI-----NEQFAGYDQQDSQELLLFLMDGLH 854
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
++L K N L D A ++ + S + +F GQ K
Sbjct: 855 EDLNKADNRKRYKEEENDHLDDQTGAD----------LAWSKHKLLNESIIVALFQGQFK 904
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
S V+ ++ S T + F+ L L + S + +++D LRLFS E L + +
Sbjct: 905 STVQCLTCHRKSRTFETFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNKVFCRHCKAH 964
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ K ++I + IL++HL RFSY + KL SV FPL + ++ P ++Y
Sbjct: 965 RDSTKKLEIWKVPPILLVHLKRFSYEGRWKQKLQTSVDFPLDNLDLAQYVIGPKQSLKRY 1024
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
L H+G GHYTA + Q W FDD V+ I TS V AY+LFY
Sbjct: 1025 NLYGVSNHYG-GLDGGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 158/361 (43%), Gaps = 38/361 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 485 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLTDINTTTSSMKGALIKAFSQV----- 539
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ + D + S ++ ++ F P Q+DAQEFL ++++ +H++
Sbjct: 540 ----IQELWENDGDHVVNTSSLKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLHED 590
Query: 137 L----LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ +K Q T I + + + AE W+ R S + D+F GQ
Sbjct: 591 VNRVTVKPQPIHTDIPDSYSDSMKAAE--SWK-----------RYLRSEDSTIVDVFVGQ 637
Query: 193 LKSVVKAQ-GNKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNA 250
L+S ++ + S T+ PF L L I S + + L F+ E L+G +
Sbjct: 638 LRSSLRCTVCDHVSVTLDPFWDLSLPIPSRSGTVRLNQCLEHFTREEVLDGDEKPTCSKC 697
Query: 251 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ KS IQ KIL++HL RFS + KL V FPL L P +G
Sbjct: 698 QMRRKCTKSFAIQKFPKILVIHLKRFSPMERFRGKLSVLVDFPL-TGLELSAFAAPRVQG 756
Query: 310 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L H G S GHYTA ++ ++ +W ++D+ VT + V+ +AYVLFY+
Sbjct: 757 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYE 815
Query: 369 Q 369
Q
Sbjct: 816 Q 816
>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 161/385 (41%), Gaps = 54/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L E + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREHLLEYYGNGKSIGDAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T + SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D L K S ++ +A GPK+ A ++ L
Sbjct: 113 AHEFLNFLLNELVDILEKEAQAVKSDPETSSPPEKIAN-------GPKHAQANGVSKEPL 165
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + Q +A + F L LDI E +I L+ FS+ E L
Sbjct: 166 VTWVHKNFQGILTNETRCLQCETVTARDETFFDLSLDI--EQNSSITSCLKNFSSTETLN 223
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 283
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 284 SN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAV 338
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 339 QTFFGSAQEYSSNTDHGYILFYESI 363
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 164/369 (44%), Gaps = 36/369 (9%)
Query: 8 VKSVKDLLPRGLI---NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF 64
+ K+ P+GL+ N GN CF+N+ LQ L + S L++ R++ + T
Sbjct: 47 INQAKNKSPQGLVGLRNLGNTCFMNSILQCLSNTSE----LRDYCLRNVHRLDVNNRTN- 101
Query: 65 VGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
+ +F + NI + SPS F + ++ P Q+DAQE
Sbjct: 102 AALMEEFAKLTQSLWTSVNIEAI------SPSDFRSEIQRVAPKFVGC-----NQQDAQE 150
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
FL ++D +H+E +N S E+ + + K+K + S
Sbjct: 151 FLRSLLDGLHNE----------VNRVTVRPRSSVEDFDHYSDEEKSKRMWNLYLAREDSK 200
Query: 185 LSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSE--AVHTIEDALRLFSAPENLEG 241
+ D+F GQLKS + +T+ PF L + I E T++D LRLF+ + L+G
Sbjct: 201 VVDLFVGQLKSSLTCTVCGFRSTMFDPFWDLSIPIAQERPGEVTLKDCLRLFTKEDVLDG 260
Query: 242 YRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRD 300
+ K IQ +IL++HL RFS + S+KL V FPL+ + R+
Sbjct: 261 EEKPTCNKCKARRKCTKRFSIQKFPQILVIHLKRFSDSNSRSSKLSTFVNFPLKELDLRE 320
Query: 301 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLH 359
++E Y L A H G + GHYTA R +W ++D+ V+ I + +V
Sbjct: 321 -FSADNSEHPVYNLYAVSNHTG-NTLGGHYTAYCRNPALGEWYSYNDSRVSPISSGQVRT 378
Query: 360 DQAYVLFYK 368
AYVLFY+
Sbjct: 379 SNAYVLFYE 387
>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
rubripes]
Length = 369
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/374 (28%), Positives = 159/374 (42%), Gaps = 66/374 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 135
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 136 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
E K + ++ + TA + AE D NK+ T + DIF G L
Sbjct: 137 QEEKKQEKQNGRLKNNGTAGATEAETD--------NKTEST--------WVHDIFQGTLT 180
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 181 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSK 238
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 239 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 293
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 352
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 353 ISKNSESGYILFYQ 366
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 143/353 (40%), Gaps = 59/353 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P +L ++ + G+ + + SG
Sbjct: 114 GLQNMGNTCFLNSALQCLTYTPPLANHMLSREHSKTCQEPGFCMMCTMQNHIIQVFANSG 173
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 174 NVIKP--IGVLN--------ELKRIAKHFRYGS---------QEDAHEFLRYTVDAMQKS 214
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L T L T+ +F+ +FGG L+S
Sbjct: 215 CL-----------PGTKL-----------------DRQTQATTFI----HQVFGGYLRSR 242
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVVT 254
VK KA S T PFL + L+I + ++ AL F PE L+G T +VT
Sbjct: 243 VKCLSCKAVSDTFDPFLDITLEI--KMAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVT 300
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I +L L L RF+ + G K+ K V++P L L R + E + Y L
Sbjct: 301 ASKRFTIHRSPNVLTLSLKRFANFTGG--KITKDVKYPESLDL-RPFMSQSQGEPQNYGL 357
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A + H G GHY + N QW +D+SV+ VL+ QAYVLFY
Sbjct: 358 YAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFY 410
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 717 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIH--- 773
Query: 77 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 774 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 820
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 821 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 871
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 872 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 931
Query: 253 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 309
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 932 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPLT---GLDLSAFAAPRVPG 988
Query: 310 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L H G S GHYTA ++ ++ +W ++D+ V+A+ V+ ++AYVLFY+
Sbjct: 989 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 1047
Query: 369 Q 369
Q
Sbjct: 1048 Q 1048
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 160/392 (40%), Gaps = 77/392 (19%)
Query: 3 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFVQ- 43
AI+ P+K KD+L P GL+N GN CF N LQ L P V
Sbjct: 151 AISRPIKQAKDVLFSYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 210
Query: 44 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 103
LL++ R+ + L F V ++ +S + FSP + L
Sbjct: 211 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 254
Query: 104 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 163
P++ ++ G RQEDA EF+ F +D M L G ++
Sbjct: 255 ---PNIGGTL-GYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 294
Query: 164 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 222
P N T Q IFGG+L+S V+ + NK S + + L ++I+ +A
Sbjct: 295 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCNKISNQYENMMDLTVEIHGDA 342
Query: 223 VHTIEDALRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
++E+ L F+A E L+G G V A K + ++ IL + L RF G G
Sbjct: 343 A-SLEECLDQFTARERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFG 401
Query: 282 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-YELVATVTHHGRDPSK--GHYTADARYFN 338
KL+K + FP L L ++ + +G Y+L V H + GHY + F
Sbjct: 402 --KLNKRISFPETLNLSP--YMSEAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQ 457
Query: 339 DQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
W DD V + +VL AY+L Y +
Sbjct: 458 GNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRC 489
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 163/402 (40%), Gaps = 87/402 (21%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
KS K+ GL N GN CF+N LQ+ + S F + L ++ P L
Sbjct: 182 KSTKEKKVVGLRNLGNTCFMNVVLQSFNNISHFCEYLTQM----------PCLEGIAFDE 231
Query: 69 SDFDTPSGGS-----SKKKNISVLDI-------------------GRPFSP-SMFEAVLK 103
+ + P+ + K +S+ D G+ SP +F A+ K
Sbjct: 232 ASLEPPTHRGRIVTPGRAKEMSMSDALLAEELRKVLLGLSLGGSNGQAISPECLFLAIWK 291
Query: 104 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 163
V G +Q+DA EFL++++D++H ELL+L L L E
Sbjct: 292 -----VVPRFRGY-QQQDAHEFLTYMLDRLHTELLQL-------------LPRLGHEPP- 331
Query: 164 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDI---- 218
G + K ++ ++ +FGG L SVV + S T +PF L LDI
Sbjct: 332 ---GLRGKQSI----------VTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRL 378
Query: 219 -----YSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHL 272
E V ++ +L F E L N G + K I L +L LH+
Sbjct: 379 QRRTKEQEEVCSLTYSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHI 438
Query: 273 MRFSYGSQGSTKLHKSVRFPLQ-------LVLGRDLLVTPSAEGRKYELVATVTHHGRDP 325
RF + + +K+ V FP++ V G + Y+L A + HHG
Sbjct: 439 KRFRWCNSYRSKVDTQVDFPMESLDMSAFTVRGMTGTRLGAQNSHLYDLAAVIVHHGSGA 498
Query: 326 SKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
GHYTA A + + QW HF+D+SV T V + Y+LFY
Sbjct: 499 GTGHYTAFAVH-DGQWFHFNDSSVRPASTESVAKCKPYILFY 539
>gi|148234990|ref|NP_001080551.1| ubiquitin specific peptidase 8 [Xenopus laevis]
gi|27697056|gb|AAH43910.1| Usp8-prov protein [Xenopus laevis]
Length = 1063
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 34/356 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + + DI ++ +G + G
Sbjct: 724 GLRNLGNTCYMNSILQCLCNTPHLAEYFNKNCYQADINRSN------LLGHKGEVAEEFG 777
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G + SP F+ + +G Q D+QE L F+MD +H
Sbjct: 778 CIMK-----ALWTGQYKCISPKDFKITIGKIN----EQFAGYSHQ-DSQELLLFLMDGLH 827
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
++L K N L D SA + + S + +F GQ K
Sbjct: 828 EDLNKADNRKRQKEENNDHLSDSQAAD----------SAWYKHKQLNESIIVSLFQGQFK 877
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
S V+ K S T + F+ L L + S + +++D ++ F+ E L + R +
Sbjct: 878 STVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLKDCIKAFAKEEKLTDSNRFDCSNCKTQ 937
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
A K ++I L IL++HL RFS+ + KL V FPL+ + ++ P + +KY
Sbjct: 938 RVATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQAYVDFPLESLDLSPYVIGPKS-SKKY 996
Query: 313 ELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L H+G GHYTA + +W FDD V+ I S V AY+LFY
Sbjct: 997 NLFGVSNHYG-GLDGGHYTAYCKNALKQRWFKFDDHDVSDISVSSVKTSAAYMLFY 1051
>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
Length = 369
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/388 (29%), Positives = 163/388 (42%), Gaps = 60/388 (15%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF + L + + I A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLDYYSNNKSIGDAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T + SS+KK V+ +P F LK N I +D
Sbjct: 70 TCLADLFTQI------SSQKKKTGVI------APKRFVQRLKK-----QNEIFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---EWETVGPKNKSAVTRTQ 178
A EFL+F+++++ D L K A+ S AE E + GPK A +
Sbjct: 113 AHEFLNFLLNELVDILEK----------EAHAIKSDAESSSPPEKISNGPKTGQANGAQK 162
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
L + + F G L + + + +A + FL L LDI E +I L+ FS+ E
Sbjct: 163 EPLVTWVHKNFQGLLTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTE 220
Query: 238 NLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 294
L + + A+K +KI+ IL++HL RF Y Q KL V FPL+
Sbjct: 221 TLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLLYRVVFPLE 280
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L L + S +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 281 LKLSNTMEDADS----EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 335
Query: 355 SKVL------------HDQAYVLFYKQV 370
S V D Y+LFY+ +
Sbjct: 336 SVVQTFFGSAQEYSSNTDHGYILFYESI 363
>gi|47225852|emb|CAF98332.1| unnamed protein product [Tetraodon nigroviridis]
Length = 511
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 110/380 (28%), Positives = 164/380 (43%), Gaps = 67/380 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD---FDTP 74
GL N GN CF+NA LQ+L + F +EL P ++ G + + T
Sbjct: 160 GLRNLGNTCFMNAILQSLSNIEQFSCYFKEL----------PAVSLRSGKTAGRRMYHTR 209
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD--------VPNSISGRPRQEDAQEFL 126
S G S ++S+++ R S+++ F+PD + S G +Q+DA EF+
Sbjct: 210 SQGES---SVSLVEEFRKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGY-QQQDAHEFM 265
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+++D +H EL N N A + + +D K + T S + S
Sbjct: 266 RYLLDHLHRELQ---------NSRNGASHTASPQDGVRLTAADGKCCINGTASVVTS--- 313
Query: 187 DIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVHTIEDALRLF 233
IFGG L++ V S PFL L LDI S+ T+ D LR F
Sbjct: 314 -IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRQKRSKDQEPGPTCTLSDCLRSF 372
Query: 234 SAPENLEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVR 290
+ E L+ T +KS K +Q L K+L LHL RF + + K+ V
Sbjct: 373 TDLEELDD--TELYFCHKCKKRQKSTKKFWVQKLPKVLCLHLKRFHWTAFLRNKIDTYVE 430
Query: 291 FPLQLVLGRDLLVTPS---AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA 347
FPL+ + R L+ P E Y+LVA V D + G + D+W HF+D+
Sbjct: 431 FPLKGLDMRGYLLEPENSLPESCVYDLVA-VASPSMDLAYGSH-------EDRWYHFNDS 482
Query: 348 SVTAIGTSKVLHDQAYVLFY 367
+VT V +AY+LFY
Sbjct: 483 TVTLTSEDAVRKAKAYILFY 502
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 114/256 (44%), Gaps = 38/256 (14%)
Query: 117 PRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTR 176
P ED+ EFL ++D MH+ L+ + P + A T
Sbjct: 39 PSCEDSHEFLRCLLDAMHEACLR----------------------RFRPAKPPPELAAT- 75
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSA 235
+ + IFGG+LKS ++ G + S T PFL L L+I A ++E AL F+A
Sbjct: 76 ------TFVYRIFGGRLKSQIECDGVDYVSRTFDPFLDLSLEINRAA--SLERALAAFTA 127
Query: 236 PENLEGYRTSSTGNAG----VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF 291
E L TS G V A K + I+ +L +HL RF YG G+ K++K V F
Sbjct: 128 AEVLTAPTTSHGRRCGSCASWVRATKRISIEDAPNVLTVHLKRFEYGGFGA-KINKHVAF 186
Query: 292 PLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTA 351
+L L R + Y+L + HHG + GHY + N W DD V A
Sbjct: 187 GTELNL-RPYMSATKGPALMYDLYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVAA 245
Query: 352 IGTSKVLHDQAYVLFY 367
+G VL +AY+LFY
Sbjct: 246 VGERTVLDQRAYILFY 261
>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
latipes]
Length = 369
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 60/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVAD-I 135
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L T P+ ++ + P+ + DIF G L +
Sbjct: 136 LQEEKKQEKQNG------RLKNNGTPVTSEPEMENKIE------PTWVHDIFQGTLTNET 183
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVNLD 296
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 159/368 (43%), Gaps = 55/368 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSV 196
L+ + + NG A SL ++ P PS + +IF G L +
Sbjct: 140 LQEERKQDKTNG-RLANGSLDSQNHNSNAPP-------------PSTWVHEIFQGTLTNE 185
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVT 254
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 186 TRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQE 243
Query: 255 AKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R Y
Sbjct: 244 AHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLY 302
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------D 360
+LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 303 DLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSE 361
Query: 361 QAYVLFYK 368
Y+LFY+
Sbjct: 362 SGYILFYQ 369
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ +Q L + P ++ LL E DI A + S
Sbjct: 649 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTTTSSMKGALIKAFSQVIH--- 705
Query: 77 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 706 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 752
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 753 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 803
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 804 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 863
Query: 253 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 309
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 864 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPL---TGLDLSAFAAPRVPG 920
Query: 310 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L H G S GHYTA ++ ++ +W ++D+ V+A+ V+ ++AYVLFY+
Sbjct: 921 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYE 979
Query: 369 Q 369
Q
Sbjct: 980 Q 980
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 159/368 (43%), Gaps = 55/368 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSV 196
L+ + + NG A SL ++ P PS + +IF G L +
Sbjct: 140 LQEERKQDKTNG-RLANGSLDSQNNNSNAPP-------------PSTWVHEIFQGTLTNE 185
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVT 254
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 186 TRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQE 243
Query: 255 AKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R Y
Sbjct: 244 AHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLY 302
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------D 360
+LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 303 DLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSE 361
Query: 361 QAYVLFYK 368
Y+LFY+
Sbjct: 362 SGYILFYQ 369
>gi|332253964|ref|XP_003276102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Nomascus
leucogenys]
Length = 565
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 162/382 (42%), Gaps = 65/382 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF--DTPS 75
GL N GN CFLNA LQ L S P RD DF + P
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPL---------RDF------------CLRRDFWQEVPG 251
Query: 76 GGSSKKKNISVLDI---------GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
GG +++ + D+ +P+ F AV + + P S SG Q+DAQEFL
Sbjct: 252 GGRAQELTEAFADVTGALWHPDSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFL 306
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTR 176
+M+++H E+ + +G AN + S L EE E+ N K + R
Sbjct: 307 KLLMERLHLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPEFSDDDRANLMWKRYLER 365
Query: 177 TQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALR 231
S D+F GQLKS +K Q S T + F L L I ++ ++ D
Sbjct: 366 ED----SKTVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFN 421
Query: 232 LFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SV 289
LF E LE T + K + +Q +IL+LHL RFS S+GS K V
Sbjct: 422 LFPKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGV 480
Query: 290 RFPLQ-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDAS 348
PLQ L LG + A Y+L A H G GHYTA R W ++D+
Sbjct: 481 DLPLQRLSLGD--FASDKAGSPVYQLYALCNHSG-SAHYGHYTALCR-CQTGWHVYNDSR 536
Query: 349 VTAIGTSKVLHDQAYVLFYKQV 370
V+ + ++V + YV FY+ +
Sbjct: 537 VSPVSENQVASSEGYVPFYQPM 558
>gi|324515005|gb|ADY46059.1| Ubiquitin carboxyl-terminal hydrolase 46 [Ascaris suum]
Length = 392
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 171/383 (44%), Gaps = 67/383 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
GL+N GN C+ N+ +QAL C PF +Q Q+L+ K T A D
Sbjct: 26 GLVNFGNTCYCNSVIQALYFCQPFREKILQYKQQLKKSGTQKENLLTCLA--------DL 77
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+++K+ + + +P F LK N I Q+DA EFL+++++ +
Sbjct: 78 FHNIATQKRRVGTI------APKRFITKLKK-----ENEIFDNYMQQDAHEFLNYLLNTI 126
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-------LS 186
E L + S + AN +A++ + P N + +R+Q PS +
Sbjct: 127 -SETLSEEKRSEKASKAN----GMAKKGS-SVINPSN-THDSRSQC-QPSGSKGESTWIH 178
Query: 187 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 245
+IF G L + + S+ + FL L +D+ A +I LR+FS E L+ +
Sbjct: 179 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSNMETLQADQKY 236
Query: 246 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLL 302
N A+K ++++ L ++L LHL RF Y Q S TKL V FPL+L L
Sbjct: 237 YCENCCSKQEAQKRMRVKKLPQLLALHLKRFKYVEQLSRYTKLSYRVLFPLELRL---FN 293
Query: 303 VTPSAEGRK--YELVATVTHHGRDPSKGHY--TADARYFNDQWLHFDDASVTAI------ 352
V+ A R Y+L A V H G P++GHY + F WL FDD V I
Sbjct: 294 VSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITVVKSHAF---WLLFDDDIVDKIDPVTIE 350
Query: 353 ---GTSKV----LHDQAYVLFYK 368
G S+ + AY+LFY+
Sbjct: 351 DFFGLSECGVQKNSESAYILFYQ 373
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 155/377 (41%), Gaps = 69/377 (18%)
Query: 6 EPV-KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP----KAGYPT 60
EP ++V + GL+N GN CFLNA LQ P VQ L+ T IP K G+
Sbjct: 112 EPASEAVPSKMGAGLLNLGNTCFLNAILQCFTHTVPLVQGLRS-STHLIPCSGHKDGFCV 170
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
+ A V GG+ SP F L F+ D R +QE
Sbjct: 171 ICALRIHVERSLVAPGGT--------------LSPLKFVNNLNYFSSDF-----RRYQQE 211
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
DA EF+ +D++ L L+ +++N + LV
Sbjct: 212 DAHEFMQCALDKLERCFLDLK--KSNLNFEDDNLVE------------------------ 245
Query: 181 LPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
+FGG+ S ++ S T +P + + L+I + V ++ AL F+ EN+
Sbjct: 246 ------KVFGGRFISKLQCSTCGHTSNTFEPLIDMSLEI--DNVDSLPSALESFTKVENI 297
Query: 240 -EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
E +R + V+ +K + + + LHL RF K+ K + FPL+L L
Sbjct: 298 DENFRCDNCKEE--VSMEKQLMLDQTPSVAALHLKRFKTNGILVEKIDKHIDFPLELDLQ 355
Query: 299 ------RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI 352
+ LV + KY+L A V H G + GHY R D W DD+ VT +
Sbjct: 356 PYTIKVMEDLVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTKV 415
Query: 353 GTSKVLHDQAYVLFYKQ 369
VL +AY+LFY +
Sbjct: 416 SVDSVLSQEAYILFYAR 432
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 125/267 (46%), Gaps = 32/267 (11%)
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + E T+ NK +
Sbjct: 8 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAIL----QENSTLSASNKCCINGA 57
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ ++ IFGG L++ V S PFL L LDI S+ V
Sbjct: 58 ST----VVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 113
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 114 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 173
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 174 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 232
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 233 WFHFNDSTVTLTDEETVVKAKAYILFY 259
>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
Length = 364
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 165/386 (42%), Gaps = 65/386 (16%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF QLL R + + +A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T + + S+KK V+ +P F +K + + +D
Sbjct: 70 TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 178
A EFL+F+++Q+ + AL A+ D P+ KS+ T +
Sbjct: 113 AHEFLNFLLNQLVE-----------------ALEKEAKSDPTAPASPEKKSSDNGATGEE 155
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
L + + IF G L + + + +A + FL L LDI E ++ LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212
Query: 238 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 294
L + + A+K +KI+T +IL LHL RF Y Q KL V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L L P +E +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 273 LKLCNTAEDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 330
Query: 355 SKVL------------HDQAYVLFYK 368
S V D Y+LFY+
Sbjct: 331 SYVQTFFGSTQEYSNNTDHGYILFYE 356
>gi|395729514|ref|XP_002809941.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pongo abelii]
Length = 594
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 517 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 572
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 573 QVASSEGYVLFYQ 585
>gi|291225440|ref|XP_002732713.1| PREDICTED: ubiquitin specific protease 8-like [Saccoglossus
kowalevskii]
Length = 1150
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 151/362 (41%), Gaps = 40/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+N+ +Q+L + +P A Y ++ ++ + G
Sbjct: 810 GLKNLGNTCFMNSIIQSLANSTPL--------------ATYFIEGSYKYHINRENKLGRG 855
Query: 78 SSKKKNISVLDIG------RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ +V+ R SP F+ + F P Q+D+QEFL F++D
Sbjct: 856 GKVAEEFAVVINAIWSGHYRSISPRDFKLTVSKFVPQFAGY-----EQQDSQEFLLFLLD 910
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+H++L +++ NT L +D+ + N + S + ++F G
Sbjct: 911 GLHEDLNRVKHRKYIEEKDNTHLT----DDQAAQLAWNNHKRLNE------SIMVELFQG 960
Query: 192 QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
Q KS ++ K S T F+ L L + S ++ D ++ F+ E + G
Sbjct: 961 QFKSTLQCLFCQKKSVTYDAFMYLSLPLLSNNRCSLYDCVKNFTKLEKVGGADKWFCPKC 1020
Query: 251 GV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V A K ++I L IL++HL RFSY KL V FP+ + ++ P
Sbjct: 1021 KVHREANKRIEIWKLPHILLIHLKRFSYEGVWRHKLQTDVDFPINNLDMSSHVIGPKKRS 1080
Query: 310 RKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H+G GHYTA + +W FDD V + T V AY+LFY
Sbjct: 1081 -SYNLYAVSNHYG-TMDGGHYTAFCKNAIRQKWYKFDDTEVYEMPTRNVKSSAAYILFYT 1138
Query: 369 QV 370
+
Sbjct: 1139 SI 1140
>gi|119573030|gb|EAW52645.1| ubiquitin specific peptidase 21, isoform CRA_d [Homo sapiens]
Length = 565
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|109017739|ref|XP_001117768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 3
[Macaca mulatta]
gi|410034003|ref|XP_524939.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 9 [Pan
troglodytes]
gi|426332415|ref|XP_004027801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Gorilla
gorilla gorilla]
Length = 565
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|340377167|ref|XP_003387101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Amphimedon queenslandica]
Length = 636
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 169/379 (44%), Gaps = 63/379 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTL-TAFVGFVSD 70
GL NSGN C++N+ LQ L + E KA +L A+ F+
Sbjct: 293 GLYNSGNTCYMNSVLQCLSHTRQMTEFFLSGDAKAEAAEATRTKARRSSLVNAYTEFLEQ 352
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
P + +P+ + + + P V S Q+DAQEFL F++
Sbjct: 353 MWKPKDD-------------KAVTPNHLRSAMSSLIPMVRTS-----EQQDAQEFLQFLL 394
Query: 131 DQMHDELLKLQGESTSINGANTALVSLAE--EDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+H+E K + S +++ ++ +E W+ R+ S+ S LSD+
Sbjct: 395 CCLHEETNKPKKRLESSESSSSTNLTPSELARSSWK-----------RSLSYDNSYLSDL 443
Query: 189 FGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVH-------TIEDALRLFSAPENLE 240
F GQ++S + + S + + F L L + S++ TI D +L+SA E L+
Sbjct: 444 FMGQVRSTLTCTTCRNTSLSFESFWSLSLPLPSKSKSHSSSLFITISDCFQLYSAEERLD 503
Query: 241 GYRTSSTGNAGVVTAKKS-------VKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ N V T KS + IQ KILILHL RF+ ++ TKL +V+ P
Sbjct: 504 ------SDNQPVCTKCKSSQPSTKKLDIQIFPKILILHLKRFTVRNRYCTKLPSNVKVPT 557
Query: 294 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 353
+ + + S + KYEL + H G S GHY A+ ++ + +W F+D VT+
Sbjct: 558 TVTVEEIAVDKESVKSFKYELYGIINHSGTI-SFGHYKAECKH-SGKWYTFNDRVVTSSS 615
Query: 354 TSKVLHDQA--YVLFYKQV 370
+ + + A YVLFY+++
Sbjct: 616 EAMITNPSASPYVLFYEKI 634
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 141/355 (39%), Gaps = 62/355 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN CF NA LQ L +P +L + G+ + ++ + P
Sbjct: 108 GLQNLGNTCFANAALQCLTYTAPLANYMLSHEHSETCHAEGFCMMCIMQDHITQALNNPG 167
Query: 76 GGSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
D+ +P F + + + +F I QEDA EFL +D M
Sbjct: 168 ------------DVIKPMFVINEMQRIASHF------QIG---EQEDAHEFLQHTVDAMQ 206
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ L E A T + +FGG L+
Sbjct: 207 EACLSGSNELDRHTQATTLIC-------------------------------QVFGGYLR 235
Query: 195 SVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV- 252
S V+ K S T P+L + L+I + TI +AL F PE L+G +
Sbjct: 236 SRVQCLNCKGVSDTFDPYLDITLEI--KGARTINEALAQFVKPEQLDGENCYQCSKCKIM 293
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A K+ I S +LIL L RFS + G K+ K V++P L + R + P+ E Y
Sbjct: 294 VPASKNFTIHQSSNVLILSLKRFSNSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIVY 350
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G + GHY + N W +D+ V+ T VL QAYVLFY
Sbjct: 351 TLYAVLIHAGYNCRVGHYLCHVKASNGLWYQMNDSKVSPSDTESVLSQQAYVLFY 405
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN CF+NA LQ L P +L ++ + G+ + ++ + P
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G+ K + D+ R + K+F QEDA EFL + +D M
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFR---------FGNQEDAHEFLRYTVDAMQK 211
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L N S S + + IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ S G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G GHY + N QW +D+ V+ VL+ QAYVLFY
Sbjct: 354 YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 360 DQAYVLFYKQV 370
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|397481302|ref|XP_003811887.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Pan paniscus]
Length = 594
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYP-TLT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 242 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 300
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 301 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 342
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 343 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 397
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 398 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 457
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 458 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 516
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 517 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 572
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 573 QVASSEGYVLFYQ 585
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 164/405 (40%), Gaps = 94/405 (23%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLS-----------------FIMDQMHDE-LLKLQGESTSINGANTALVSLAE 159
+Q+DA EF + F Q LL LQ INGA+T + +
Sbjct: 257 QQQDAHEFNALPFGPPTLGNFRAVSTVFPAQQFCRRILLCLQVNKCCINGASTVVTA--- 313
Query: 160 EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI 218
IFGG L++ V S PFL L LDI
Sbjct: 314 ----------------------------IFGGILQNEVNCLICGTESRKFDPFLDLSLDI 345
Query: 219 YSE------------AVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLS 265
S+ V ++ D LR F+ E L E + K IQ L
Sbjct: 346 PSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLP 405
Query: 266 KILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHG 322
K+L LHL RF + + K+ V FPL+ + + L+ P G + Y+L A V HHG
Sbjct: 406 KVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKWYLLEPENSGPESCLYDLAAVVVHHG 465
Query: 323 RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
GHYTA A + +W HF+D++VT V+ +AY+LFY
Sbjct: 466 SGVGSGHYTAYATH-EGRWFHFNDSTVTLTDEETVVKAKAYILFY 509
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 160/369 (43%), Gaps = 60/369 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 80
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N ++ S E+ P + P+ + +IF G L +
Sbjct: 129 LQEERKQEKQNGRLPNGSVDS-------ESSSPPD-----------PTWVHEIFQGTLTN 170
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 171 ETRCLTCETVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 228
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R
Sbjct: 229 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRM 287
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 288 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 346
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 347 ESGYILFYQ 355
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 160/371 (43%), Gaps = 62/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 40 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 93
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 94 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 141
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +S G A + P P+ + +IF G L S
Sbjct: 142 LAERSQSKPTGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 181
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ + +I LR FS E L + + A
Sbjct: 182 RCLNCETVSSKDEDFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 239
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 240 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 296
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 297 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 355
Query: 360 DQAYVLFYKQV 370
+ Y+LFY+ +
Sbjct: 356 ETGYILFYQSI 366
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 152/363 (41%), Gaps = 79/363 (21%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-----ELRTRDIPKAGYPTLTAFVGFVSDFD 72
GL N GN CFLN+ LQ L+ P +++L E R K+G+ A SD
Sbjct: 180 GLFNQGNTCFLNSALQCLLHTPPLLRILMAHTKAECRV----KSGFCMSCAMQEVSSD-- 233
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG---RPRQEDAQEFLSFI 129
S KK GR F+P + +N NSI+ + RQEDA EFL +
Sbjct: 234 -----SFKK--------GRAFTPL---PITRNL-----NSIAKHLRKGRQEDAHEFLRYA 272
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D + L G + E W + IF
Sbjct: 273 IDSLQKSCLA---------GYPPKIDHKLAETTW---------------------VHKIF 302
Query: 190 GGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GGQL+S V Q S T L L +DIY+ + +++AL+ F+A + L+G Y+
Sbjct: 303 GGQLRSRVTCQQCGYNSDTFDSILDLSIDIYN--ISGLKEALKKFTAKDYLKGADKYKCE 360
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
V A+K I +L +HL RF+ + KL +R+ VL ++
Sbjct: 361 KCKRP--VNAEKQFTIHEAPAVLTVHLKRFTPMGR---KLQHPIRY--DEVLSLQPAMSE 413
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-DQAYV 364
G Y+L ++H G P+ GHY A R + QW +D SV + + L+ AY+
Sbjct: 414 GQHGPTYKLYGVISHMGGGPNSGHYFAHVRGGDGQWYEMNDDSVERVHKPEPLNMKNAYM 473
Query: 365 LFY 367
LFY
Sbjct: 474 LFY 476
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 61/369 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 124
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ LAE + + G K + P+ + +IF G L S
Sbjct: 125 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 167
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 168 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 225
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 226 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 282
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 283 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 341
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 342 ETGYILFYQ 350
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 159/369 (43%), Gaps = 58/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG AN L S N S T + + +IF G L +
Sbjct: 140 LQEERKQDKQNGKLANGTLDS-----------QNNNSTPPST-----TWVHEIFQGTLTN 183
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 184 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 241
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R
Sbjct: 242 EAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RL 300
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 301 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNS 359
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 360 ESGYILFYQ 368
>gi|344297764|ref|XP_003420566.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Loxodonta africana]
Length = 367
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 147/371 (39%), Gaps = 51/371 (13%)
Query: 7 PVKSVKDLLPR-----GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPT 60
PV V + P GL N GN C++NA LQ L S SP V+ L + K+
Sbjct: 29 PVNEVDEDQPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKSCGEV 88
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
TAF ++D G SP +F + L N P + Q+
Sbjct: 89 ATAFAYLMTDMWLGDSGC--------------VSPEIFRSALGNLYPAF-----MKKTQQ 129
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF 180
DAQEFL ++++ +H+ L K S V T+S
Sbjct: 130 DAQEFLIYVLNDLHEALKKYHRRSYEKGSTRRCC-----------------RKVIATES- 171
Query: 181 LPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
S ++ +F GQL V+ + S + F +L L I SE +++D L+ F + L
Sbjct: 172 --SIITRLFEGQLNYDVICLKCENCSYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTL 229
Query: 240 EGYRT--SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 297
S TA ++ I KI+I HL RF KL + +PL +
Sbjct: 230 TWNNQIHCSFCETKQETAVRA-SISKAPKIIIFHLKRFDVQGTMKRKLRTHIHYPLTNLD 288
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSK 356
+ + KY L A V H G D GHYTA R Q W FDD V+ I +
Sbjct: 289 LTPYICPIFRKHPKYSLCAVVNHFG-DLDGGHYTAFCRNSVTQAWYSFDDTRVSEIPNTS 347
Query: 357 VLHDQAYVLFY 367
V AY+LFY
Sbjct: 348 VQTATAYLLFY 358
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 61/369 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 140 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 193
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++
Sbjct: 194 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE-- 239
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ LAE + + G K + P+ + +IF G L S
Sbjct: 240 -----------------IILAERTQSKPTGGKCGAGDAAGSPPEPTWVHEIFQGILTSET 282
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 283 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 340
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 341 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 397
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 398 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 456
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 457 ETGYILFYQ 465
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 140/363 (38%), Gaps = 72/363 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA-GYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P L + + +A G+ + A V SG
Sbjct: 1 GLSNLGNTCFLNSVLQCLTYTPPLAGYLDSGQHKATCRAAGFCAMCALQEHVRQALASSG 60
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
G+ SPS L+ + RQEDA E+L +++ +H+
Sbjct: 61 GA--------------VSPSTLVKNLRCISKSFR-----MWRQEDAHEYLRCLIEGLHNC 101
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L G K+ SAV++ +S + IFGG+L+S
Sbjct: 102 CLP--------------------------PGVKSNSAVSQERSLI----HKIFGGRLRSQ 131
Query: 197 VKAQGN-KASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK S T P L L L+I ++ AL F+A E LEG Y S
Sbjct: 132 VKCTVCLTCSNTYDPLLDLSLEIVR--ADSLTKALNRFTAVEALEGDNKYHCSHCNKK-- 187
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP------- 305
V A K I IL + RFS K+ K + F GR L + P
Sbjct: 188 VRALKQFTIDKPPNILTIQFKRFSSTGSSGGKIDKKIEF------GRTLDLKPYISNPQV 241
Query: 306 -SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
SA KY L A + H G GHY R D W DD+ V + VL +AY+
Sbjct: 242 CSATDAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKSVLDQKAYI 301
Query: 365 LFY 367
LFY
Sbjct: 302 LFY 304
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERNQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 360 DQAYVLFYKQV 370
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN CF+NA LQ L P +L ++ + G+ + ++ + P
Sbjct: 112 GLQNLGNTCFVNAALQCLTYTPPLANYMLSHEHSKICHEQGFCMMCTMQAHITQALNNP- 170
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G+ K + D+ R + K+F QEDA EFL + +D M
Sbjct: 171 -GNVIKPMPVINDLRR---------IAKHFR---------FGNQEDAHEFLRYTVDAMQK 211
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L N S S + + IFGG L+S
Sbjct: 212 ACL-------------------------------NGSTKLDRHSQATTLVCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCMNCKGVSDTFDPYLDIPLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKC--KK 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ S G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFSGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G GHY + N QW +D+ V+ VL+ QAYVLFY
Sbjct: 354 YVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
Length = 361
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 164/370 (44%), Gaps = 58/370 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+L + + ++A T P ++ T+ P+ + +IF G L S
Sbjct: 126 ILAERNSGKTPAAGSSA-----------TTTPIGQTNGANTE---PTWVHEIFQGILTSE 171
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVT 254
+ S+ + F L +D+ +I LR FS E L N
Sbjct: 172 TRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSYQE 229
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGR 310
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 230 AQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---R 286
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---------LH-- 359
Y+L A V H G P++GHY + + + WL FDD V I S + +H
Sbjct: 287 LYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKS 345
Query: 360 -DQAYVLFYK 368
+ Y+LFY+
Sbjct: 346 SETGYILFYQ 355
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 152/364 (41%), Gaps = 67/364 (18%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
+ PRGL+N GN C+ NA LQ L S P V LL ++ + +
Sbjct: 466 IYPRGLLNCGNSCYANAVLQCLTSTKPLVIYLLYRSHSKACCAKDWCLMCEL-------- 517
Query: 73 TPSGGSSKKKNISVL-DIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+++I +L + G P SPS +++ N G QEDA EFL ++
Sbjct: 518 --------EQHIMILRENGAPLSPSRILWHMRSI-----NCHMGEGSQEDAHEFLRLLIA 564
Query: 132 QMHDELLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
M L+ L GE + V P+ + + + FG
Sbjct: 565 SMQSICLEGLGGE--------------------KKVDPRIQET---------TFIQHTFG 595
Query: 191 GQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
G+L+S VK N S + + L L+I V ++EDAL F++PE+L+G G
Sbjct: 596 GRLQSKVKCLNCNHESERYENIMDLTLEILG-WVESLEDALTQFTSPEDLDGENMYRCGR 654
Query: 250 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
V A+K + I IL + L RF G G K++K + FP L D++ +
Sbjct: 655 CTSYVRARKQLSIHEAPNILTIVLKRFQEGRYG--KINKCITFPEML----DMIPFMTGT 708
Query: 309 GRK---YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAY 363
G Y L A V H GHY + + W DDA V + ++V+ + AY
Sbjct: 709 GDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQVMSEGAY 768
Query: 364 VLFY 367
+LFY
Sbjct: 769 ILFY 772
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 159/371 (42%), Gaps = 62/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +S G A + P P+ + +IF G L S
Sbjct: 127 LAERSQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 166
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 167 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 224
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 225 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 281
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 282 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 340
Query: 360 DQAYVLFYKQV 370
+ Y+LFY+ +
Sbjct: 341 ETGYILFYQSI 351
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 286
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 287 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 345
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 346 GYILFYQ 352
>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
Length = 364
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 114/386 (29%), Positives = 165/386 (42%), Gaps = 65/386 (16%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFV-QLLQEL-RTRDIPKAGYPTL 61
K++ D P G L N GN C+ N+ LQAL C PF QLL R + + +A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCIPFRDQLLDYYGRIKTVGEAEENLL 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T + + S+KK V+ +P F +K + + +D
Sbjct: 70 TCLADLFTQIN------SQKKKTGVI------APKRFVQRVKK-----QHELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA---VTRTQ 178
A EFL+F+++Q+ + L K A+ D P+ KS+ T +
Sbjct: 113 AHEFLNFLLNQLVETLEK-----------------EAKSDPTAPASPEKKSSDNGATGEE 155
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
L + + IF G L + + + +A + FL L LDI E ++ LR FS+ E
Sbjct: 156 HPL-TWVHKIFQGCLTNETRCLRCETITAKDEKFLDLSLDI--EQNSSVTSCLRNFSSTE 212
Query: 238 NL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQ 294
L + + A+K +KI+T +IL LHL RF Y Q KL V FPL+
Sbjct: 213 TLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHLKRFKYMEQLGRYKKLSYRVVFPLE 272
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L L P +E +Y L A V H G P+ GHY + + N WL FDD +V I
Sbjct: 273 LKLCNTAEDAPGSES-EYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDE 330
Query: 355 SKVL------------HDQAYVLFYK 368
S V D Y+LFY+
Sbjct: 331 SYVQTFFGSTQEYSNNTDHGYILFYE 356
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 154/363 (42%), Gaps = 58/363 (15%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
++ P GLIN GN C+ NA LQ L P +Q L +++ + F +F
Sbjct: 519 EMRPCGLINCGNSCYANAVLQCLAFTPPLTAYFVQGLHSKECVNKEW-------CFTCEF 571
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
++ + + K+ P SP + L+N + G R+EDA EFL + +D
Sbjct: 572 ESLMLKAKEGKS--------PLSPIGILSQLQNIASQL-----GTGREEDAHEFLRYAID 618
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK G +N AL S EE + + FGG
Sbjct: 619 TMQSVCLKEAG----VN----ALGSFEEE---------------------TTLIGLTFGG 649
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
L+S +K + + S + + L ++I + + +EDALR F+ E L+G G
Sbjct: 650 YLRSKIKCMKCHYKSERHERMMDLTVEIEGD-IEKLEDALRRFTGTEILDGDNKYQCGRC 708
Query: 251 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
AKK + I +L + L RF G G KL+KS+RFP L L + T S +
Sbjct: 709 KSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-SDKS 765
Query: 310 RKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L V H GHY + ++W DD++VTA+ +VL AY+L Y
Sbjct: 766 PIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTKGAYMLLY 825
Query: 368 KQV 370
+
Sbjct: 826 ARC 828
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 228 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 286
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 287 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 345
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 346 GYILFYQ 352
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 160/374 (42%), Gaps = 65/374 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 135
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 136 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
E K + ++ + TA+ + +T +NK P+ + +IF G L
Sbjct: 137 QEERKQEKQNGRLKNNGTAIAT-------DTEPEQNKID--------PTWVHEIFQGTLT 181
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 182 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCEMCCSK 239
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 240 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 294
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 353
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 354 ISKNSESGYILFYQ 367
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 140/355 (39%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P +L + + K + L A ++ G
Sbjct: 81 GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTFCMLCALQAHMTRALCHPG 140
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
D+ RP P + A + +QEDA EFL F + M
Sbjct: 141 -----------DVIRPL-PRLLAAFHTH-------------QQEDAHEFLMFTLGAMQQA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P++K + QS + + IFGG +S
Sbjct: 176 CL-----------------------------PEDKP--SDPQSEDATLIRQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+ S+T+ P+L + LDI EA ++ AL PE L+G G V
Sbjct: 205 IHCLHCQGISSTMDPYLDISLDI--EAAQSVSQALEQLVKPEKLDGENAYHCNTCLGKVP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K + + T SK+LIL L RFS + K+ K V +P L + + L A Y L
Sbjct: 263 ASKMLTLHTPSKVLILVLKRFSDFT--GNKMAKDVHYPEHLDM-QPYLCEQRAGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + N QW DD+ VTA + L AYVLFY Q
Sbjct: 320 YAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYIQ 374
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|390476931|ref|XP_002760234.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 isoform 2
[Callithrix jacchus]
Length = 565
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 163/372 (43%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + A +L EE + N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPAPSPPCRGGALLEEPDLSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>gi|321475285|gb|EFX86248.1| hypothetical protein DAPPUDRAFT_308438 [Daphnia pulex]
Length = 376
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 166/380 (43%), Gaps = 62/380 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + ++ ++ LT + T
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKMKN-KRSKETLLTCLADLFHNITT---- 79
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + + +P F A LK + N + Q+DA EFL+F+++ + E+
Sbjct: 80 --QKKKVGTI------APKKFIARLKKEKEEFDNYM-----QQDAHEFLNFLINHI-SEI 125
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA----------VTRTQSFLPSALSD 187
+ + T+ + T + + P N SA +T T + + + +
Sbjct: 126 ITAERHQTNNSATPTTNGKVQNSKD-----PCNGSASLKFDGSNGSMTSTGNHESTWVHE 180
Query: 188 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
IF G L S + S + F L +D+ +I LR FS+ E L T +
Sbjct: 181 IFQGILTSETRCLNCETVSNKEEDFFDLQVDVDQNT--SITHCLRTFSSTETL---CTDN 235
Query: 247 TGNAGVVT----AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRD 300
V + A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L
Sbjct: 236 KFKCDVCSSYQEAQKCMRVKKLPLILALHLKRFKYVEQYNRHIKVSHRVVFPLELRL--- 292
Query: 301 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV--- 357
+ R Y+LVA V H G P++GHY + + +D WL FDD V I S +
Sbjct: 293 FNTSEECPDRLYDLVAVVVHCGSGPNRGHYISIVKS-HDFWLLFDDDIVDKIDPSALEDF 351
Query: 358 ---------LHDQAYVLFYK 368
+ Y+LFY+
Sbjct: 352 YGLTSDVQKASETGYILFYQ 371
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 99
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 100 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 146 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 190
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 307
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 308 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 366
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 367 GYILFYQ 373
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 152/368 (41%), Gaps = 69/368 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N C+ NATLQ L+ P +++ LT G
Sbjct: 148 GLHNPSMACYANATLQILLHTPPVLRI---------------ALTHDEGNCLQI------ 186
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLSFIMD 131
KKKN +L + + + K + P + +S + RQED EF F+ D
Sbjct: 187 --KKKNFCMLCSLKHMAEGSHWSGRKAYAPGIHRHLSQIKKGFSKNRQEDTHEFFRFVTD 244
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+ NTAL L + D E + K+ S V R ++GG
Sbjct: 245 ALQ----------------NTALAKLPK-DTPEKI--KHTSWVYR-----------VWGG 274
Query: 192 QLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
+++S VV ++ N S T FL L LD+ + ++ L F+ + LEG
Sbjct: 275 RVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCEKC 334
Query: 251 GV-VTAKKSVKIQTLSKILILHLMRFSY------GSQGSTKLHKSVRFPLQLVLGRDLLV 303
A KS K+ +L LHL RFS G + K ++ ++F L + +V
Sbjct: 335 KCKANATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQNLDMA-PYMV 393
Query: 304 TPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ-A 362
P + G KY L H G + GHYT+ R + QW H DD V+ + +VL+D+ A
Sbjct: 394 DPKSPGSKYRLFGVTCHRGTELRFGHYTSYVRSPSGQWFHADDDDVSPVQLEQVLNDKTA 453
Query: 363 YVLFYKQV 370
Y+L Y +V
Sbjct: 454 YLLSYIRV 461
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 152/369 (41%), Gaps = 74/369 (20%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 75
P GL N GN C+LN+ LQ L P L+ + D+ +
Sbjct: 27 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSL-----------------CDSVA 69
Query: 76 GGSSKKKN-ISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
G K+ +L+ I R S P+ ++ LK F RQEDA EF
Sbjct: 70 NGDRKRDCPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFRCG-----RQEDAHEF 124
Query: 126 LSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
L +++D H+ L+L+ I VS+ +E
Sbjct: 125 LRYVIDACHNTCLRLKKLRRKGIENGGGGGVSVVKE------------------------ 160
Query: 185 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-- 241
IFGG L+S VK N S V + + LD+ + +++ DA++ F PE L+G
Sbjct: 161 ---IFGGALQSQVKCLCCNYESNKVDEIMDISLDVLNS--YSVRDAMQKFFQPEVLDGNN 215
Query: 242 -YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS--YGSQGSTKLHKSVRFPLQLVLG 298
Y+ +V A+K + I +L++ L RF +G+ K+ K++ F LVL
Sbjct: 216 KYKCEKCQK--LVAARKQMSILQAPNVLVIQLKRFEGIFGA----KIDKAIAFEEVLVLS 269
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
+ T +Y L T+ H G P GHY A + +W +D+ VT +VL
Sbjct: 270 SFMSKTSQDPQPEYNLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVL 329
Query: 359 HDQAYVLFY 367
++ YVLF+
Sbjct: 330 SEKVYVLFF 338
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 38 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 137
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 138 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 182
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 183 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 299
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 300 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 358
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 359 GYILFYQ 365
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|403294063|ref|XP_003938024.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Saimiri
boliviensis boliviensis]
Length = 596
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 116/372 (31%), Positives = 163/372 (43%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 244 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 302
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 303 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 344
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + A +L EE + N K + R S
Sbjct: 345 HLEINRRGRRAPPILASGPAPSPPRRGGALLEEPDLSDDDRANLMWKRYLERED----SK 400
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 401 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 460
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 461 ESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRLS 519
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 520 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 575
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 576 VASSEGYVLFYQ 587
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 168
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 285
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 286 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 344
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 345 GYILFYQ 351
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 145 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 198
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 199 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 244
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 245 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 289
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 290 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 347
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 348 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 406
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 407 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 465
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 466 GYILFYQ 472
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 140/355 (39%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P +L + + K + L A ++ G
Sbjct: 81 GLQNLGNTCYVNAVLQCLTYTPPLASSMLSQQHQQTCGKQTFCMLCALQAHMTRALCHPG 140
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
D+ RP P + A + +QEDA EFL F + M
Sbjct: 141 -----------DVIRPL-PRLLAAFHTH-------------QQEDAHEFLMFTLGAMQQA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P++K + QS + + IFGG +S
Sbjct: 176 CL-----------------------------PEDKP--SDPQSEDATLIRQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+ S+T+ P+L + LDI EA ++ AL PE L+G G V
Sbjct: 205 IHCLHCQGISSTMDPYLDISLDI--EAAQSVSQALEQLVKPEKLDGENAYHCNTCLGKVP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K + + T SK+LIL L RFS + K+ K V +P L + + L A Y L
Sbjct: 263 ASKMLTLHTPSKVLILVLKRFSDFT--GNKMAKDVHYPEHLDM-QPYLCEQRAGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + N QW DD+ VTA + L AYVLFY Q
Sbjct: 320 YAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALSQHAYVLFYIQ 374
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 44 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 95
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 96 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 143
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + + E P P+ + +IF G L +
Sbjct: 144 LQEERKQEKQNG---RLPNGSVDSENNHSTPD------------PTWVHEIFQGTLTNET 188
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 189 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 246
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 247 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 305
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 306 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 364
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 365 GYILFYQ 371
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 166/385 (43%), Gaps = 50/385 (12%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 61
K++ D P G N GN C+ N+ LQAL C PF + L E T + + A +
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+++++++ D L K E+ + + S + E + + V + +
Sbjct: 113 AHEFLNYLLNEVVDILEK---EAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIV 169
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + +IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 170 -TWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 287 SNT--VEPYAD-VEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAV 342
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 343 QTFFGSSQEYSSNTDHGYILFYESL 367
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 146/356 (41%), Gaps = 65/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++NATLQ L T P A Y L+ G T
Sbjct: 81 GLQNMGNTCYVNATLQCL--------------TYTEPLASY-MLSQQHGTTCRRQTSCML 125
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ + +++ + +L F R +QEDA E+L FI+D M
Sbjct: 126 CTLQAHLTRVLCHPGRVLRPLPLLLAAFH---------RHKQEDAHEYLMFILDAMQQ-- 174
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L E+ + P++ + + + +FGG +S +
Sbjct: 175 -----------------ACLPEDKLSDPECPQDSTLIQQ-----------LFGGYWRSQI 206
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 253
+ S+T++P+L + LDI A H++ AL PE LEG Y S V
Sbjct: 207 QCLHCQGISSTLEPYLDISLDI--GAAHSVSQALEQLVKPELLEGENAYHCSKCLEK--V 262
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K + + T K+LIL L RFS K+ K VR+P +L + + L A Y
Sbjct: 263 PASKVLTLHTSPKVLILVLRRFS--DLTGNKMTKEVRYPERLDM-QHCLSEQRAGLLVYV 319
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H GR GHY + N QW DDA V+A + LH AY+LFY Q
Sbjct: 320 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALHQPAYILFYMQ 375
>gi|351710726|gb|EHB13645.1| Ubiquitin carboxyl-terminal hydrolase 21 [Heterocephalus glaber]
Length = 565
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 164/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE + N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANAPVPSPPRRGGALLEEPDLSDDDRANVMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILDLDLNRFST-SRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 165/398 (41%), Gaps = 79/398 (19%)
Query: 18 GLINSGNLCFLNATLQALMSC---SPFVQLLQELRTRDIPKAGYP---TLTAFVGFVSD- 70
GL N GN CF+N+ LQ+L + S + + L + KA + T FV +
Sbjct: 233 GLRNLGNTCFMNSVLQSLSNIQEFSCYFNTMPALEMKHKQKAYHSRSMKETMDDVFVVEE 292
Query: 71 -----FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
+ GG K IS P V+ P RQ DA EF
Sbjct: 293 LRKVLLNLSQGGDGSKSAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHEF 338
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPSA 184
L +++D++H EL ++ + V L E P N S ++ Q+ S
Sbjct: 339 LRYMLDRLHTELQQV-----------SFPVELGGPKSGEHKNPYNVSGLSHLQAKGRNSI 387
Query: 185 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSEA----------------- 222
++++FGG L+S V+ S PFL L LDI YS+
Sbjct: 388 VTNVFGGVLQSEVRCLICGMESKKHDPFLDLSLDIPEKYYSKEHGADGTNGADGGGGAAP 447
Query: 223 VHTIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFS 276
V I D L F+ E L E Y +S +KS K I+ L +L LH+ RF
Sbjct: 448 VCHISDCLSSFTEVEELAETELYYCNSCK-----CKQKSTKRFWIRRLPNVLCLHIKRFR 502
Query: 277 YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGH 329
+ + TK+ + FP+ + ++ E R+ Y+L A + HHG S GH
Sbjct: 503 WNNFYRTKIDLRIAFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGH 562
Query: 330 YTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
YT+ A N W+HF+D +V + ++ V + Y+LFY
Sbjct: 563 YTSFA-INNGVWMHFNDHTVKEVSSTAVAECKPYILFY 599
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 169/385 (43%), Gaps = 50/385 (12%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 61
K++ D P G N GN C+ N+ LQAL C PF + L E T + + A +
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+++++++ D +L+ + ++T T+ S E+ P+ V + +
Sbjct: 113 AHEFLNYLLNEVVD-ILEKEAKATKTE-HETSSSSSPEKIANGLKVPQANGVVHKEP--I 168
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + +IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 287 SNT--VEPYAD-VEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAV 342
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 343 QTFFGSSQEYSSNTDHGYILFYESL 367
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ +Q L + P ++ LL E DI + A + S
Sbjct: 641 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIH--- 697
Query: 77 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 698 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 744
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 745 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 795
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 796 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 855
Query: 253 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 309
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 856 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPL---TGLDLSAFAAPRVPG 912
Query: 310 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L H G S GHYTA ++ ++ +W ++D+ V+ + V+ ++AYVLFY+
Sbjct: 913 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 971
Query: 369 Q 369
Q
Sbjct: 972 Q 972
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 161/367 (43%), Gaps = 53/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL+ + CF+N+ LQ L + LQ L RD+ G+ T A + +F
Sbjct: 42 GLLLNKAKCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSNAHTALMEEF----- 92
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 93 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 143
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLP---SALSDIFG 190
H+E+ N V E P ++ + +L S + D+F
Sbjct: 144 HNEV-------------NRVTVRPKPSPENLDHLPDDEKGRQMWRKYLEREDSRIGDLFV 190
Query: 191 GQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTS 245
GQLKS + +TV PF L L I Y E T+ D +RLF+ + L+G
Sbjct: 191 GQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKP 248
Query: 246 STGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLL 302
+ K+ +K +Q KIL+LHL RFS ++KL V FPL+ + R+
Sbjct: 249 TCYRCRA--RKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-F 305
Query: 303 VTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQ 361
+ + Y L A H G GHYTA R +W F+D+SVT + +S+V
Sbjct: 306 ASENTNHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSD 364
Query: 362 AYVLFYK 368
AY+LFY+
Sbjct: 365 AYLLFYE 371
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 169/377 (44%), Gaps = 45/377 (11%)
Query: 5 NEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI----PKAGYP 59
N V S + GL N GN CF+N+ LQ L + P ++ LL E DI
Sbjct: 110 NRNVSSTEKGGLNGLKNIGNTCFMNSVLQCLSNTKPLLEYLLHEEYMTDINFTISAMKGS 169
Query: 60 TLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQ 119
+ AF + + P+ ++ K I+ + F++ ++ F P Q
Sbjct: 170 LIKAFSNVIQELWAPN---AEDKIINTTN---------FKSQIQKFAPRFMGYA-----Q 212
Query: 120 EDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS 179
+DAQEFL ++++ +H+++ ++ + I L + D+ + K A R
Sbjct: 213 QDAQEFLRYLLEGLHEDVNRVTVKPQQI---------LTDIDDSLSDNQKATEAWKRYLR 263
Query: 180 FLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPE 237
S + DIF GQLKS ++ S T PF L L + S ++ L F+ E
Sbjct: 264 MDDSKVVDIFVGQLKSTLQCTVCGHCSVTFDPFWDLSLPVPSRTGQPKLQSCLDAFTKEE 323
Query: 238 NLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
L+G + KS IQ KIL+LHL RFS + KL +V FPL
Sbjct: 324 VLDGEEKPTCSKCETRRKCTKSFSIQKFPKILVLHLKRFSPTERYRGKLSITVDFPLT-- 381
Query: 297 LGRDLLVTPSA----EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTA 351
+L ++P A +G Y L A H G GHYTA ++ ++ W ++D+ V++
Sbjct: 382 ---NLDLSPYAANKGQGCTYNLYAISNHSG-TAYGGHYTAYCKHPYSGNWHEYNDSRVSS 437
Query: 352 IGTSKVLHDQAYVLFYK 368
+ + V+ +AYVLFY+
Sbjct: 438 LSSRSVVSGEAYVLFYE 454
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 137/360 (38%), Gaps = 74/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P L+ P G TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWLVSRQHATLCPAGGSCTLCAMRAHVTR------ 146
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P +L F R +QEDA EFL F + M
Sbjct: 147 --------ALLHAGEVIRP--HRDLLAGFH---------RHQQEDAHEFLMFTLSGMQQG 187
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED S + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------SVVRQIFGGTWRSQ 216
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ S T P+L + LDI A ++E ALR PE LE G V
Sbjct: 217 IQCLHCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLEAENAYDCGVCLRKVP 274
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P + L V P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTQLS--GAKRAQEVRYP------QCLDVQPYTSERKAGP 326
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G +GHY R N QW DDA VTA + L AY+LFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYILFYAR 386
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG P + P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 167
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 284
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 285 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 343
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 344 GYILFYQ 350
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 110 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 163
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 164 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 209
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + D P + P+ + +IF G L +
Sbjct: 210 LQEERKQEKQNGR----LPNGNIDSENNSSPPD-----------PTWVHEIFQGTLTNET 254
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 255 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 312
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 313 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 371
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 372 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 430
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 431 GYILFYQ 437
>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 370
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 161/369 (43%), Gaps = 59/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 139
Query: 138 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + S +N +++ P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGRLPNGCIDS------------ENNNSLPD-----PTWVHEIFQGTLTN 182
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 183 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 240
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R
Sbjct: 241 EAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRM 299
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 300 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 358
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 359 ESGYILFYQ 367
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 84 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 135
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 136 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 183
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 184 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 228
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 229 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 286
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 287 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 345
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 346 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 404
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 405 GYILFYQ 411
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 153/362 (42%), Gaps = 67/362 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-------YPTLTAFVGFVS- 69
G N+GN CFLNATLQAL+ +P + + R P++ + L V+
Sbjct: 181 GFYNTGNTCFLNATLQALVH-TPALAIGLMDRDEHSPESCDLARAKKFCALCRMYRLVNM 239
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
FD S GS PS L F P + RQEDA EFL +
Sbjct: 240 CFDKASYGSHA------------IEPSPINRALSKFAPTMRGG-----RQEDAHEFLRLL 282
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
++ M NGA A++ + E+ + + +F
Sbjct: 283 VEAMQ-------------NGALQGRAEKAKQKQKES-----------------TFVHRMF 312
Query: 190 GGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG+L+S VV N S T FL L LDI +++ AL+ + + L G
Sbjct: 313 GGKLRSRVVCEHCNTPSDTFDNFLDLSLDI--SQANSVSSALKAYHKFDRLRGANQYKCD 370
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+ AKKS+ + + IL LHL RF++ + K++K V F L L +
Sbjct: 371 KCKCLRDAKKSMSVFSAPPILTLHLKRFNFRGR---KINKRVNFEDSLDLKPAMSNESDI 427
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL--HDQAYVL 365
G Y+L A V H G+ GHY A + N +W DD++V +I S+ + ++ AY+L
Sbjct: 428 TG--YKLYAVVCHRGQSNKSGHYYAHVKASNGKWYVADDSTVESISDSRTVLANEHAYIL 485
Query: 366 FY 367
FY
Sbjct: 486 FY 487
>gi|332219294|ref|XP_003258791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21 [Nomascus
leucogenys]
Length = 565
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 163/373 (43%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN SL E+ E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANVQFPLTRRKRGSLREQMEASDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
Length = 353
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 159/367 (43%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + +NKS P+ + +IF G L +
Sbjct: 124 LQEERKQEKQNG------RLPNGN----IDNENKSPPD------PTWVHEIFQGTLTNET 167
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 168 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 225
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 226 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 284
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 285 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 343
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 344 GYILFYQ 350
>gi|393907557|gb|EFO20320.2| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 406
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 164/376 (43%), Gaps = 47/376 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
GL+N GN C+ N+ +QAL C PF +Q Q+L+ ++G F
Sbjct: 32 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+++KK + + +P F LK N I Q+DA EFL+++++ +
Sbjct: 92 I---ATQKKRVGTI------APKRFITKLKK-----ENGIFDNFSQQDAHEFLNYLLNTI 137
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA--LSDIFGG 191
+ L + + T + + + P A + S A + +IF G
Sbjct: 138 SETLAEEKKIEKMEKILRTN--GMTRKGASVILPPCESLAFCQPSSSKSDATWIQEIFQG 195
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
L + + S+ + FL L +D+ A +I LR+FS E L+G + N
Sbjct: 196 TLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKYYCENC 253
Query: 251 GVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSA 307
A+K ++I+ L ++L LHL RF Y Q + TKL V FPL+L L V+ A
Sbjct: 254 CSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRL---FNVSDDA 310
Query: 308 EGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI---------GTSK 356
R Y+L A V H G P++GHY + N WL FDD V I G S+
Sbjct: 311 VNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFDDDIVDKIDPMAIEDFFGLSE 369
Query: 357 V----LHDQAYVLFYK 368
+ AY+LFY+
Sbjct: 370 CGVQKNSESAYILFYE 385
>gi|353230425|emb|CCD76596.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 654
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 155/356 (43%), Gaps = 25/356 (7%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++N+ +Q+L V + G+ A V + G
Sbjct: 302 GLRNLGNTCYINSVVQSLSHTRALVHYFLD---------GFHERQAVVSNRLGY-----G 347
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS--GRPRQEDAQEFLSFIMDQMHD 135
K+ +L P+ +A L F V S Q+D+ EFL F++D +H+
Sbjct: 348 GEIVKHFEMLLSALYNQPNQ-DAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHE 406
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+L + + E N +T L E+ + + ++A + + F S + F G L+S
Sbjct: 407 DLNEARSEK---NNNSTKLKHNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRS 463
Query: 196 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVV 253
VK + S T F++L L I + D L+LF E + G R
Sbjct: 464 TVKCNSCHVTSTTFDVFMVLSLPIEQNKCQ-LTDCLKLFLEKEEMVGQCRWHCPSCNTRR 522
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K +++ L LI+HL RF Y K +V FP++ + +V P +Y
Sbjct: 523 DASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHSSEYA 582
Query: 314 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
L + + H G S GHYT R D +W +DD +V+ + +++ +D AY+LFY+
Sbjct: 583 LYSVLNHRGTMES-GHYTTFCRNIRDGRWYEYDDENVSLLDKNEIQNDNAYILFYE 637
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 161/361 (44%), Gaps = 38/361 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ +Q L + P ++ LL E DI + A + S
Sbjct: 639 GLRNIGNTCFMNSVIQCLSNTRPLLEYLLNEQYLADINTSTSSMKGALIKAFSQVIH--- 695
Query: 77 GSSKKKNISVLDIGRPF--SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
+ ++G + + ++ ++ F P Q+DAQEFL ++++ +H
Sbjct: 696 --------ELWEVGGDLVVNTTALKSQIQRFAPRFMGY-----SQQDAQEFLRYLLEGLH 742
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+++ ++ + I+ + E T K + R S + D+F GQL+
Sbjct: 743 EDVNRVTVKPQPIH---------TDIPEMYTDSQKAVESWKRYLRSEDSMIVDVFVGQLR 793
Query: 195 SVVKAQG-NKASATVQPFLLLHLDIYSEA-VHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
S + + S T+ PF L L I + + + L F+ E L+G + +
Sbjct: 794 SSLHCTSCDHVSVTLDPFWDLSLPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQM 853
Query: 253 V-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEG 309
KS IQ KIL++HL RFS + +KL+ V FPL G DL P G
Sbjct: 854 RRKCTKSFSIQKFPKILVIHLKRFSPMERFRSKLNVMVDFPL---TGLDLSAFAAPRVPG 910
Query: 310 RKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L H G S GHYTA ++ ++ +W ++D+ V+ + V+ ++AYVLFY+
Sbjct: 911 CTYNLYGVANHSGTTHS-GHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYE 969
Query: 369 Q 369
Q
Sbjct: 970 Q 970
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG P + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 183
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 300
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 301 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 359
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 360 GYILFYQ 366
>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
Length = 367
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 49/369 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + ++ + TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + ++ + AN D + N + + + + P+ + +IF G L S
Sbjct: 127 LAERNQAKAGGAANGP-------DLNGGLNGGNGGSSSNSGNTEPTWVHEIFQGILTSET 179
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVTA 255
+ S+ + F L +D+ + +I LR FS E L N A
Sbjct: 180 RCLNCETVSSKDENFFDLQVDV--DQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEA 237
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 238 QKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 294
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 295 YDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 353
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 354 ETGYILFYQ 362
>gi|12847085|dbj|BAB27431.1| unnamed protein product [Mus musculus]
Length = 569
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 164/376 (43%), Gaps = 53/376 (14%)
Query: 18 GLINSGNL---CFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSD 70
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTLPQCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGA 271
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIM 130
P D +P+ F AV + + P S SG Q+DAQEFL +M
Sbjct: 272 LWHP-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLM 313
Query: 131 DQMHDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSF 180
+++H E+ + + I + +L EE E N K + R
Sbjct: 314 ERLHLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED-- 371
Query: 181 LPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSA 235
S + D+F GQLKS +K Q S T + F L L I ++ ++ D LF+
Sbjct: 372 --SKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTK 429
Query: 236 PENLEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPL 293
E LE T + K + +Q +IL+LHL RFS S+GS K V FPL
Sbjct: 430 EEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPL 488
Query: 294 Q-LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI 352
Q L LG + A Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 489 QRLSLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPV 544
Query: 353 GTSKVLHDQAYVLFYK 368
++V + YVLFY+
Sbjct: 545 SENQVASSEGYVLFYQ 560
>gi|303272151|ref|XP_003055437.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463411|gb|EEH60689.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 364
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 160/400 (40%), Gaps = 96/400 (24%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
RGL N GN CFLN+ +Q L PF F+S+ P+
Sbjct: 9 RGLQNLGNTCFLNSCVQCLAHAPPFSDY----------------------FLSE---PAY 43
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR------PR------------ 118
+KK I +P+M EAV+K P+ S R PR
Sbjct: 44 PRRRKKTI--------LAPAM-EAVVKAIHDANPSVASARRVAAHNPRGLLRAMDDVPPL 94
Query: 119 -------QEDAQEFLSFIMDQMHDELLKLQGESTSINGAN--TALVSLAEEDEWETVGPK 169
Q D+QEFL +++ ++DEL ++ + T ++ + W +
Sbjct: 95 DLFTDRDQHDSQEFLRMLLENLNDELNVVEKPPPYREEKDDFTEPENVKADRLWAQYVAR 154
Query: 170 NKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIE- 227
S +TRT F GQL+S V+ + S + PF L L + + ++
Sbjct: 155 CDSVMTRT-----------FAGQLRSSVECHKCGTCSTSYDPFWDLSLPLRASKKGSVGG 203
Query: 228 -----------DALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRF 275
D LR F+ E LEG T + V +A K ++++ ++L++HL RF
Sbjct: 204 GGGGAGPIGVIDCLRAFTEDETLEGSDTRTCPKCKVKGSATKRLRVKRWPRVLVIHLKRF 263
Query: 276 SYGSQG--STKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSK 327
++G G K+ +V P L LG D L + EG KY+L A H G
Sbjct: 264 TWGKSGRPGKKMDAAVDVPYDLSLG-DFLADDALEGGRGLHPPKYKLFAVTNHMG-SLGG 321
Query: 328 GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
GHYTA +W F+D + + + AYVLFY
Sbjct: 322 GHYTASCEVGGGKWFTFNDENCSGEDGPPRVSKHAYVLFY 361
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/371 (27%), Positives = 157/371 (42%), Gaps = 50/371 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKIQ--PRRKESLLTCLA------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + + NG +TQ + + +IF G L +
Sbjct: 141 QEEKSQERQQNGKVVQNGGSGSGGGGSGSSTGEGETEEKTQQ---TWVHEIFQGTLTNET 197
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 198 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 255
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 256 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 310
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 311 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 369
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 370 NSESGYILFYQ 380
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 34 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKESLLTCLA------DLFHSI 85
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 86 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 133
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + E P P+ + +IF G L +
Sbjct: 134 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 178
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 179 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 236
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 237 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 295
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 296 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 354
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 355 GYILFYQ 361
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCIMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFR---------FGNQEDAHEFLQYTVDAM-- 209
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ +NG+N T+ +F+ IFGG L+S
Sbjct: 210 -------QKACLNGSNKL------------------DRHTQATTFV----CQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A T+ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQTVNKALEQFVKPEQLDGENAYKCSKC--KK 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+VTA K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVTASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 154/358 (43%), Gaps = 61/358 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF--DTPS 75
G+ N GN C+LN+TLQAL F L T K G + S
Sbjct: 125 GMQNVGNTCYLNSTLQALFHVPAFANWLVSDCTH-AEKCNQEEACVICGMRATLMATQKS 183
Query: 76 GGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
GG++ K P+ S + K+ TP RQEDA EFL ++++ M
Sbjct: 184 GGAAIK----------PWQVYSKLRLICKHLTPG---------RQEDAHEFLRYLVEAME 224
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L + L++ + D++ S + L+ I GG L+
Sbjct: 225 KCYL-------------SRLINADKLDQY---------------SKETTPLNQILGGYLR 256
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE--GYRTSSTGNAG 251
S V+ + S T Q F L LDI + T+++AL F + E LE GY+ +
Sbjct: 257 STVRCLACHHLSTTYQHFQDLLLDIRKHS--TLDEALDSFFSRERLEDLGYKCEACNKK- 313
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V+A K I+ +L + L RFS KL K V+F ++ L + + +
Sbjct: 314 -VSATKQFFIERAPMVLCIALKRFSLAG---GKLSKHVQFRKKINLNKYIYNKNNPHQLS 369
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y+LV+ VTH G + GHYTA + N + FDD+ V I S VL AY++F+++
Sbjct: 370 YKLVSLVTHLGPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIPLSAVLGTNAYIMFFEK 427
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 120 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 173
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 174 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 219
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + E P P+ + +IF G L +
Sbjct: 220 LQEERKQEKQNG---RLRNGDVDTEDNNSTPD------------PTWVHEIFQGTLTNET 264
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 265 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 322
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 323 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 381
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 382 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 440
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 441 GYILFYQ 447
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 151/363 (41%), Gaps = 63/363 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 74
P GL+N GN CF N LQ L P + LL++ R+ + L F V
Sbjct: 177 PCGLLNCGNSCFANVVLQCLSFTRPLIAFLLEKGHHRECCHNDWCFLCEFETHVEKVRLS 236
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
S + FSP + L N + + G RQEDA EF+ F +D M
Sbjct: 237 S---------------QAFSPMNILSRLPNISGTL-----GYGRQEDAHEFMRFSIDAMQ 276
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
V L E + V P+N+ + + IFGG L+
Sbjct: 277 S-------------------VCLDEFGGEKVVPPRNQET---------TLIQHIFGGHLQ 308
Query: 195 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S V+ + K S + + L ++I+ +A ++E+ L F+A E L G Y+ G
Sbjct: 309 SEVICTECEKNSNQYENMMDLTVEIHGDAA-SLEECLDQFTAKEWLHGDNMYKCD--GCK 365
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
G V A K + ++ IL + L RF G G KL+K V FP L L ++ +G
Sbjct: 366 GYVKAWKRLTVKQAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSP--YMSEVGDGS 421
Query: 311 K-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y+L A V H + GHY + F W DD V+++ +VL AY+L Y
Sbjct: 422 DIYKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWKVSSVELEEVLSQGAYMLLY 481
Query: 368 KQV 370
+V
Sbjct: 482 SRV 484
>gi|256084798|ref|XP_002578613.1| ubiquitin-specific peptidase 22 (C19 family) [Schistosoma mansoni]
Length = 489
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 159/368 (43%), Gaps = 72/368 (19%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
RGLIN GN CFLN +QAL +P +L++ D+ + PT
Sbjct: 172 RGLINMGNTCFLNVVIQALTH-TP---VLRDYLLADLHRCSSPT---------------- 211
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSI-----------SGRPRQEDAQEF 125
+ +N ++ R + +++ V+ TP VPN++ +G Q DA EF
Sbjct: 212 ---RSRNCLACEMVR-ITQELYKPVV---TPFVPNNLLYAIWLHASHLAGY-EQRDAHEF 263
Query: 126 LSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
L ++ +H L+ GE E+ + S+ + +
Sbjct: 264 LITLLTLIHGHLV---GE--------------------ESPHDHDVSSSRESSDSCDCIV 300
Query: 186 SDIFGGQLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 244
+F G L+SV+ +G + S+TV PFL L LD+ +++ L + PE ++G
Sbjct: 301 HQVFFGDLESVISYEGCEHRSSTVDPFLDLSLDVIQRGSTSLQACLGSYFRPELIDGLIW 360
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG---RDL 301
S N G A K + L +L +L R TK++ S+ FP++L + +
Sbjct: 361 CSQCNIGR-PAVKQFSLLHLPNVLCFYLKR----CHHDTKINTSITFPVELDMAPYLHQI 415
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
+ SA KY L A + H G+ S GHYTA R W DD V ++ + VLH
Sbjct: 416 VGDQSAWYDKYSLYAVLNHSGQTNS-GHYTAYIRVGPTSWCLCDDQKVVSVNLNDVLHTD 474
Query: 362 AYVLFYKQ 369
AYVL Y +
Sbjct: 475 AYVLLYHK 482
>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
Length = 415
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 167/360 (46%), Gaps = 48/360 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ +QAL C PF + + R + + K+G T F +
Sbjct: 28 GLVNFGNTCYCNSVIQALFFCRPFREKMLNYR-QTLKKSGTSKETLMTCLADLFHSI--- 83
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + + +P F LK N + Q+DA EF +++++ + + L
Sbjct: 84 ANQKRRVGTI------APKRFITKLKKENESFDNYV-----QQDAHEFFNYLLNSISEAL 132
Query: 138 L---KLQGESTSINGA---NTALVSLA------EEDEWETVGPKNKSAVTRTQSFLPSAL 185
+ K + E +S +G V+++ +DE E G + + R +S + +
Sbjct: 133 ITDKKAEREKSSRHGTIKKGNVTVNMSPATAGISKDERERNGTEGSDS--RPES---TWI 187
Query: 186 SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG--- 241
+IF G L + K + S + FL L +D+ E +I LR+FS E L G
Sbjct: 188 HEIFEGILTNETKCLSCDTKSCKDENFLDLSIDV--EQNTSITHCLRVFSETETLCGDQK 245
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY--GSQGSTKLHKSVRFPLQLVLGR 299
Y + + A+K ++I+ ++L LHL RF Y TKL V FPL+L L
Sbjct: 246 YYCETCSSKQ--EAQKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLELRL-- 301
Query: 300 DLLVTPSAE--GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
V+ AE + Y+LVATV H G P++GHY + N WL FDD V + S +
Sbjct: 302 -FNVSDDAEEADQIYDLVATVVHCGATPNRGHYITLVKS-NSFWLVFDDDIVEKLDVSSM 359
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|198435016|ref|XP_002126339.1| PREDICTED: similar to ubiquitin specific peptidase 8 [Ciona
intestinalis]
Length = 1094
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 163/363 (44%), Gaps = 50/363 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ + + + + +L + T+D+ +A +G
Sbjct: 760 GLRNLGNSCYMNSVLQCMFNMTQLAEYILTDSYTKDLNRANK------IGH--------- 804
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVL----KNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
G ++ SVL R S +E ++ K+ + +S +G QED+QEFL ++D
Sbjct: 805 GGRVAESFSVL--LRAVWSSKYEYIVPSDFKSIIGTINSSFAGY-TQEDSQEFLMLLLDG 861
Query: 133 MHDELLKLQGESTSINGANTALV-SLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+H++L K N AL A + W+ +N+S + ++ G
Sbjct: 862 LHEDLNKAPQSEYKEEPDNDALDDEEAAQMAWKYHKKRNESIIV-----------ELLKG 910
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
Q K+ VK KAS PF+ L L + +++ +I D L+ F E + G N
Sbjct: 911 QFKATVKCLHCGKASRKFDPFMYLSLPLPNKSA-SIYDILKSFQRVEQMTGSDRWHCPNC 969
Query: 251 GVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ A +S++I L +LI+H RF + + K+H ++ +P+ L +TP G
Sbjct: 970 KTLRDAVRSIEIWKLPPVLIIHFKRFVHTGRWRDKIHTNISYPMT-----QLDLTPFISG 1024
Query: 310 R----KYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ KY L A H G GHYTA + ++ W FDD V + TS A +
Sbjct: 1025 KQRRPKYNLFAVSHHQGAGLDSGHYTASCKSVLDNNWYKFDDTEV--MRTSAPQGPTASI 1082
Query: 365 LFY 367
LFY
Sbjct: 1083 LFY 1085
>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
Length = 370
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVDEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|45382531|ref|NP_990257.1| ubiquitin carboxyl-terminal hydrolase 2 [Gallus gallus]
gi|3800760|gb|AAC68863.1| ubiquitin specific protease 46 [Gallus gallus]
Length = 403
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 151/360 (41%), Gaps = 41/360 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDI---PKAGYPTLTAFVGFVSDFDT 73
GL N GN C++N+ LQ L + LQ RD + ++ F + F T
Sbjct: 20 GLRNLGNTCYMNSILQCLSNTKELRDYCLQNQYLRDFNNNSRMRTAFMSEFAKLIQLFWT 79
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
S S SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 80 SSPNDS-------------VSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHFPDDE------KSRQMWRRYQEREDSPVSDFFLGQL 171
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ L LF+ + L+G +
Sbjct: 172 KSSLTSSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMHCLPLFTKEDLLDGDEKPTCC 229
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 230 RCKARTRCTKKFSIQKFPKILLLHLKRFSEARIRASKLTTFVDFPLKDLDLRE-FASQSC 288
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y+L H G ++ R +W F+D+ VT + ++ V AY+LFY
Sbjct: 289 NHAVYKLYGVSNHSGTTMGGHYHCLLKRPSPAEWHSFNDSRVTPMSSTHVRSSDAYLLFY 348
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 152/363 (41%), Gaps = 58/363 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFV 68
S ++ P GLIN GN C+ NA LQ L P +Q L ++ L F
Sbjct: 14 SKAEMRPCGLINCGNSCYANAVLQCLAFTPPLTSFFVQGLHSKS-------CLNRECCFS 66
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+F++ + + K+ P SP + L+N + N R+EDA EFL +
Sbjct: 67 CEFESIILKAKEGKS--------PLSPLGILSQLQNIGSQLGNG-----REEDAHEFLRY 113
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+D M LK G +N A+ S AEE + +
Sbjct: 114 AIDAMQSVCLKEAG----VN----AMDSFAEE---------------------TTLIGLT 144
Query: 189 FGGQLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
FGG L S +K + Q ++ L ++I + +EDALR F++ E L+G
Sbjct: 145 FGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGN-IGKLEDALRRFTSAEILDGDNKYQC 203
Query: 248 GNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
G AKK + I +L + L RF G G KL+KS+RFP L L + T S
Sbjct: 204 GRCKSYEKAKKKMTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-S 260
Query: 307 AEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+ Y L + H GHY + ++W DD++VTA+ +VL AY+
Sbjct: 261 DKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYM 320
Query: 365 LFY 367
L Y
Sbjct: 321 LLY 323
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 141/358 (39%), Gaps = 81/358 (22%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P + LL R K + L A V+
Sbjct: 81 GLQNLGNTCYVNAVLQCLTHTPPLAISLLNGQHQRACQKQPFCMLCAVRAHVTR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + ++ +F R RQEDA EFL F +D M
Sbjct: 135 --------ALLHPGDVIQPR--KDLVASFH---------RHRQEDAHEFLMFALDAMQ-- 173
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ E T I IFGG +S
Sbjct: 174 --RCPSEDTLIQ--------------------------------------QIFGGCWRSQ 193
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVV-- 253
++ + S T P+L + LDI A ++E ALR E L+G + + GV
Sbjct: 194 IQCLRCLGVSDTFDPYLDVTLDI--TAAQSVEQALRELVKAEKLDG---ENAYHCGVCLR 248
Query: 254 --TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K + + SK+LIL L RF+ + K+ K VR+P L L + L A
Sbjct: 249 KGPATKRLTLHRASKVLILVLKRFTDVT--GDKMDKKVRYPEHLDL-QPYLSVQKAGALD 305
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
YEL A + H G +GHY R N W DD+ VTA T+ L AYVLFY Q
Sbjct: 306 YELFAVLVHSGWTCHQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFYIQ 363
>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
[Ornithorhynchus anatinus]
Length = 368
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 38 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 89
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 90 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTVAD-I 137
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + D P + P+ + +IF G L +
Sbjct: 138 LQEERKQEKQNGR----LPNGNLDSENNNSPPD-----------PTWVHEIFQGTLTNET 182
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 183 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 240
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 241 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGGATNPDRMYD 299
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 300 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 358
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 359 GYILFYQ 365
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 143/357 (40%), Gaps = 63/357 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD-IPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ +Q L P LQ + ++ AG+ L A VS SG
Sbjct: 110 GLENLGNTCFLNSVVQCLTYTEPLAAYLQSGKHQNSCHVAGFCALCAIQKHVSRALQSSG 169
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
S K++ S + +NF RQEDA E++ +++ MH
Sbjct: 170 RSLVPKDLV----------SNLRCISRNFR---------NARQEDAHEYMVNLLESMHKC 210
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S +LV IFGG L+S
Sbjct: 211 CLPSGVPSESPAAYEKSLVH------------------------------KIFGGHLRSQ 240
Query: 197 VKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
V+ Q + S PFL L L+I T+ ALR F+A E L+G Y+
Sbjct: 241 VECQQCSYCSNKFDPFLDLSLEI--AKADTLPVALRNFTAAEVLDGGEKQYQCQRCKQK- 297
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR- 310
V AKK + + +L +HL RF G K+ K V F L + V+ S EG
Sbjct: 298 -VRAKKRLTVHKAPHVLTIHLKRFHAHDPGR-KVDKKVIFDRSLDI--KPFVSGSYEGEL 353
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L + H+G + GHY R ++ W +D V + VL +AY+LFY
Sbjct: 354 KYSLYGVLVHYGHNTHSGHYVCFVRTSSNMWHLLNDNQVRQVSEKTVLEQKAYMLFY 410
>gi|395503246|ref|XP_003755981.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
isoform 2 [Sarcophilus harrisii]
Length = 371
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 145/357 (40%), Gaps = 49/357 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S +P V+ L + K TAF ++D
Sbjct: 43 GLRNLGNTCYMNAILQCLCSITPLVEYFLSGKYITALQKDSGEAATAFAYLMTDM----- 97
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F A + P + Q+DAQEFL ++++++H+
Sbjct: 98 ---------WLGDSDCVSPEVFRAAIGKIYPAFL-----KRTQQDAQEFLIYVLNELHEA 143
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
L K + + T NG +T + V S +TR +F GQL
Sbjct: 144 LKKYRRKKTQENGLSTKC--------YRKVASSESSIITR-----------LFEGQLNYD 184
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 255
+V + + + F +L L I SE ++++ L F + L ++ + +
Sbjct: 185 IVCLKCENCTYKNEVFTVLSLPIPSECECSLQECLGCFFQQDTLTW---NNQIHCAFCES 241
Query: 256 KKSVKIQT----LSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
K+ ++ K +I HL RF + KL + +PL + + + K
Sbjct: 242 KQDAAVRASIAKAPKTVIFHLKRFDCQGRVKRKLRTDIHYPLNNLDLSPYIYPLFRKHPK 301
Query: 312 YELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L V H G D GHYTA + N W FDD V I S V AY+LFY
Sbjct: 302 YSLCGVVNHFG-DLDGGHYTAFCKNTVNQTWYSFDDTRVCEIPDSAVQTAAAYLLFY 357
>gi|312083170|ref|XP_003143749.1| ubiquitin carboxyl-terminal hydrolase 46 [Loa loa]
Length = 389
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 162/381 (42%), Gaps = 74/381 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
GL+N GN C+ N+ +QAL C PF +Q Q+L+ ++G F
Sbjct: 32 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLKKSYDKESGREKENLLTCLADLFHN 91
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ ++KK + + D NF+ Q+DA EFL+++++ +
Sbjct: 92 IA---TQKKRVGIFD---------------NFS------------QQDAHEFLNYLLNTI 121
Query: 134 HDELLKLQGESTSINGANT-------ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+ L + + T A V L + P +KS T Q
Sbjct: 122 SETLAEEKKIEKMEKILRTNGMTRKGASVILPPCESLAFCQPSSKSDATWIQ-------- 173
Query: 187 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 245
+IF G L + + S+ + FL L +D+ A +I LR+FS E L+G +
Sbjct: 174 EIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCLRVFSDMETLQGEQKY 231
Query: 246 STGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLL 302
N A+K ++I+ L ++L LHL RF Y Q + TKL V FPL+L L
Sbjct: 232 YCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSYRVLFPLELRL---FN 288
Query: 303 VTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI-------- 352
V+ A R Y+L A V H G P++GHY + N WL FDD V I
Sbjct: 289 VSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFDDDIVDKIDPMAIEDF 347
Query: 353 -GTSKV----LHDQAYVLFYK 368
G S+ + AY+LFY+
Sbjct: 348 FGLSECGVQKNSESAYILFYE 368
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 3 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVK------- 55
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 56 -------TALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 103
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG+L+S
Sbjct: 104 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 133
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +A + AL+ F+A E L+G Y+
Sbjct: 134 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 190
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 191 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKVSNLK 247
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 248 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 303
>gi|149408831|ref|XP_001507996.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform 1
[Ornithorhynchus anatinus]
Length = 1116
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 156/358 (43%), Gaps = 37/358 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI ++ L G V++ F
Sbjct: 776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNFYQEDINRSN---LLGHKGEVAEEFGI-- 830
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L G R SP F+ + + SG Q+D+QE L F+MD +
Sbjct: 831 -------IMKALWTGQYRYISPKDFKITIGKIN----DQFSGY-SQQDSQELLLFLMDGL 878
Query: 134 HDELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
H++L K N L A E W N+S + +F GQ
Sbjct: 879 HEDLNKADNRKRHKEENNDHLDDCRAAELAWHKHKQLNESIIVA-----------LFQGQ 927
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNA 250
KS V+ +K S T + F+ L L + S + +++D LRLFS E L + R +
Sbjct: 928 FKSTVQCLTCHKRSRTFEAFMYLSLPLASTSKCSLQDCLRLFSKEEKLTDNNRFYCSHCK 987
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ + +
Sbjct: 988 TRRDSLKKIEIWKLPPVLLVHLKRFSYEGRWKQKLQTSVDFPLESLDLSQYVIGSKSSLK 1047
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
+Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1048 RYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1104
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 145/354 (40%), Gaps = 61/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CFLN+ LQ L P V L K VGF +
Sbjct: 127 GLTNLGNTCFLNSVLQCLTYTPPLVNYLSSSEHAHTCKQ--------VGFCMVCELQRHF 178
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+N G+ P A+L+ + GR QEDA EFL +++D M
Sbjct: 179 RRCYENG-----GQAIKP---HAILQKIKLIAKHMHWGR--QEDAHEFLRYVIDAM---- 224
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + +NG NT L +++E + ++ IFGG L+S V
Sbjct: 225 -----QKSCLNG-NTKLDRISKET---------------------TVINQIFGGFLRSQV 257
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE---GYRTSSTGNAGVV 253
KA S T PFL + +D+ + V I+ A F PE L+ Y + V
Sbjct: 258 VCLKCKAKSNTYDPFLDISVDV--KNVPNIQKAFEKFVQPEQLDLDNAYNCTKCKQK--V 313
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A+K I S +L + L R YG G K+ + + FP +L + R + Y+
Sbjct: 314 AAQKRFTIHKPSNVLTIQLKR--YGVMGG-KVTRHISFPEKLNI-RPYMSVSQGAAITYQ 369
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G + GHY R N W +D+ V +VL+ +AY+LFY
Sbjct: 370 LYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMNDSMVQQTSQGRVLNSEAYMLFY 423
>gi|148707161|gb|EDL39108.1| ubiquitin specific peptidase 21, isoform CRA_b [Mus musculus]
Length = 566
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 162/373 (43%), Gaps = 50/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPCRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL L L RFS S+GS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILGLDLNRFST-SRGSIKKSSVGVDFPLQRL 488
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 489 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 544
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 545 QVASSEGYVLFYQ 557
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 153/362 (42%), Gaps = 63/362 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTP 74
P GL+N GN CF N LQ L P V LL++ + + L F V
Sbjct: 180 PCGLLNCGNSCFANVVLQCLTYTRPLVAYLLEKGHQTECKHNDWCFLCEFQSHV------ 233
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
++ + S L PFSP + L+N ++ G RQEDA EF+ F +D M
Sbjct: 234 -----ERASQSAL----PFSPMNILSRLRNIGGNL-----GYGRQEDAHEFMRFAIDTMQ 279
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
V L E + V P ++ + + IFGG+L+
Sbjct: 280 S-------------------VCLDEFGGEKAVEPASQET---------TIIQHIFGGRLQ 311
Query: 195 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGV 252
S V+ + NK S + + L ++I+ +A ++E+ L F+ E L G G
Sbjct: 312 SQVICTKCNKISNQFENMMDLTVEIHGDA-ESLEECLNQFTDKEWLHGENMYKCDGCNDY 370
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK- 311
V A K + IQ +L + L RF G G KL+K V FP L DL S +G
Sbjct: 371 VKAWKRLTIQRAPNVLTIALKRFQSGRFG--KLNKRVTFPETL----DLSPYMSEKGDGA 424
Query: 312 --YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y+L A V H + GHY + F+ W DD+ V+++ +VL AY+L Y
Sbjct: 425 DVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDSKVSSVELDEVLSQGAYMLLY 484
Query: 368 KQ 369
+
Sbjct: 485 SR 486
>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
jacchus]
gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
troglodytes]
gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
Length = 370
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 151/362 (41%), Gaps = 61/362 (16%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSP---FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
P GL N GN C+LN+ LQ L P F LQ D + P
Sbjct: 23 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSSGSSCPFCILEKQIARSLR 82
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
LD+ +PS ++ ++ F + RQEDA EFL +++D
Sbjct: 83 --------------LDLTHD-APSKIQSCIRIFAENFRCG-----RQEDAHEFLRYVIDA 122
Query: 133 MHDELL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
H+ L KL+ + NG +E TV + +IF
Sbjct: 123 CHNTCLRLKKLRRKGAEANGG-------GDEAGGSTV------------------VKEIF 157
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG L+S VK S V + + LD++ ++++D+++ F PE L+G Y+
Sbjct: 158 GGALQSQVKCLCCGYESNKVDEIMDISLDVFHS--NSLKDSMQKFFQPEVLDGNNKYKCD 215
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTP 305
S +V AKK + I IL++ L RF G G K+ K+V F LVL +
Sbjct: 216 SCKK--LVAAKKQMSILQAPNILVIQLKRFE-GILGG-KIDKAVAFEEVLVLSSFMCKAS 271
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+Y+L T+ H G P GHY A + +W DD+ VT +VL ++ Y+L
Sbjct: 272 QDPQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYIL 331
Query: 366 FY 367
F+
Sbjct: 332 FF 333
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 147/357 (41%), Gaps = 69/357 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P +L + ++ + TL A ++ G
Sbjct: 82 GLQNMGNTCYVNAALQCLTYTPPLASYMLSQQHSKTCQNQRFCTLCAMQVHITRALYHPG 141
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISG--RPRQEDAQEFLSFIMDQMH 134
D+ +P +P ++G R RQEDA EFL F +D M
Sbjct: 142 -----------DVIQP----------------LPELVTGFHRRRQEDAHEFLMFTLDAMQ 174
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L E++ V + + + R IFGG +
Sbjct: 175 QACL----------------------SEYKQVDGHSDNTLVR----------QIFGGYWR 202
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 252
S ++ + S T P+L + LDI +A ++ AL PE L+G +
Sbjct: 203 SQIQCLHCHGVSDTFDPYLDVTLDI--KAALSVNQALEQLVKPEKLDGENSYHCSMCLKK 260
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A K++ + T SK+L+L L RFS + +K+ K V++P L + + + ++ Y
Sbjct: 261 VPASKTLTLHTSSKVLMLLLKRFSNFT--GSKMPKDVQYPEYLDM-QQYMSQQNSGPLLY 317
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + N QW DDA VTA + L AYVLFY Q
Sbjct: 318 VLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKMDDAKVTACDVTSALSQCAYVLFYIQ 374
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 111
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 112 SG-----------DIMKP--------------SQILTSAFHKYQQEDAHEFLMFTLETMH 146
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 147 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 173
Query: 193 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 174 WRSQIKCLLCQGT--SDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 229
Query: 250 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 230 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 286
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 287 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 346
Query: 369 Q 369
Q
Sbjct: 347 Q 347
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 161/370 (43%), Gaps = 54/370 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+L + S NG A G T + P+ + +IF G L S
Sbjct: 126 ILAERNAGPS-NGNPKAT---------NQGGSTRNGTGTNGANSEPTWVHEIFQGILTSE 175
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVT 254
+ S+ + F L +D+ +I LR FS E L N
Sbjct: 176 TRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSYQE 233
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGR 310
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 234 AQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---R 290
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---------LH-- 359
Y+L A V H G P++GHY + + + WL FDD V I S + +H
Sbjct: 291 LYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKS 349
Query: 360 -DQAYVLFYK 368
+ Y+LFY+
Sbjct: 350 SETGYILFYQ 359
>gi|402591575|gb|EJW85504.1| ubiquitin carboxyl-terminal hydrolase [Wuchereria bancrofti]
Length = 430
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 170/396 (42%), Gaps = 69/396 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF----VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
GL+N GN C+ N+ +QAL C PF +Q Q+L+ + K LT + T
Sbjct: 38 GLVNFGNTCYCNSVIQALYFCRPFREKILQYKQQLK-KSYDKESENLLTCLADLFHNIAT 96
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS------GRPRQEDAQEFLS 127
+KK + + +P F LK + N+I Q+DA EFL+
Sbjct: 97 ------QKKRVGTI------APKRFITKLKKENGETINNIYIILGIFDNFSQQDAHEFLN 144
Query: 128 FIMDQMHDEL----------LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
++++ + + L ++ + G+N V L + P NK +
Sbjct: 145 YLLNTISETLAEEKKAEKMEKMIRTNGMTKKGSN---VILPPYEPLTLCQPSNKIKLIWL 201
Query: 178 QSFLPSALSD------IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
L + SD IF G L + + S+ + FL L +D+ A +I L
Sbjct: 202 N--LSGSKSDATWIQEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNA--SITHCL 257
Query: 231 RLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHK 287
R+FS E L+G + N A+K ++I+ L ++L LHL RF Y Q + TKL
Sbjct: 258 RVFSDMETLQGEQKYYCENCCSKHEAQKRMRIKKLPQMLALHLKRFKYVEQMNRHTKLSY 317
Query: 288 SVRFPLQLVLGRDLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 345
V FPL+L R V+ A R Y+L A V H G P++GHY + N WL FD
Sbjct: 318 RVLFPLEL---RLFNVSDDAVNRDRLYDLCAVVVHCGSTPNRGHYITLVKSHN-FWLLFD 373
Query: 346 DASVTAI---------GTSKV----LHDQAYVLFYK 368
D V I G S+ + AY+LFY+
Sbjct: 374 DDIVDKIDPMAIEDFFGLSECGVQKNSESAYILFYE 409
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 85 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 144
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 145 SG-----------DIMKPSQ--------------ILTSAFHKYQQEDAHEFLMFTLETMH 179
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 180 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 206
Query: 193 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 207 WRSQIKCLLCQG--TSDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 262
Query: 250 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 263 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 319
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 320 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 379
Query: 369 Q 369
Q
Sbjct: 380 Q 380
>gi|256081222|ref|XP_002576871.1| ubiquitin-specific peptidase 8 (C19 family) [Schistosoma mansoni]
Length = 1027
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 155/356 (43%), Gaps = 27/356 (7%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++N+ +Q+L V + G+ A V + G
Sbjct: 677 GLRNLGNTCYINSVVQSLSHTRALVHYFLD---------GFHERQAVVS-----NRLGYG 722
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS--GRPRQEDAQEFLSFIMDQMHD 135
K+ +L P+ +A L F V S Q+D+ EFL F++D +H+
Sbjct: 723 GEIVKHFEMLLSALYNQPNQ-DAELYKFRSAVAKHQSKFSSNDQQDSLEFLLFLLDGLHE 781
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+L +++ N +T L E+ + + ++A + + F S + F G L+S
Sbjct: 782 DLNEVKK-----NNNSTKLKHNESMIEYTSSNEQAEAAWIQHKDFNNSIIVSSFQGLLRS 836
Query: 196 VVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVV 253
VK + S T F++L L I + D L+LF E + G R
Sbjct: 837 TVKCNSCHVTSTTFDVFMVLSLPIEQNKCQ-LTDCLKLFLEKEEMVGQCRWHCPSCNTRR 895
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K +++ L LI+HL RF Y K +V FP++ + +V P +Y
Sbjct: 896 DASKWIELWKLPTYLIIHLKRFRYEYGNWRKQTTNVDFPIECLDMSSFIVGPKLHSSEYA 955
Query: 314 LVATVTHHGRDPSKGHYTADARYFND-QWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
L + + H G S GHYT R D +W +DD +V+ + +++ +D AY+LFY+
Sbjct: 956 LYSVLNHRGTMES-GHYTTFCRNIRDGRWYEYDDENVSLLDKNEIQNDNAYILFYE 1010
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------LPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + ++ WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HEFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 146/361 (40%), Gaps = 74/361 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ T
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHTH 145
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG DI +P + S + +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DIMKPSQ--------------ILTSAFHKYQQEDAHEFLMFTLETMH 180
Query: 135 DELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ L++ Q E TS ED S + DIFGG
Sbjct: 181 ESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGGW 207
Query: 193 LKSVVKA---QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
+S +K QG S T PFL + LDI S ++ AL E L G G
Sbjct: 208 WRSQIKCLLCQG--TSDTYDPFLDVPLDISS--AQSVNQALWDTEKSEELHGENAYYCGR 263
Query: 250 A-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+A
Sbjct: 264 CRQKMPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSQPTAG 320
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A + H G GHY + + +W DD VT + VL++ AYVLFY
Sbjct: 321 PLPYALYAVLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYV 380
Query: 369 Q 369
Q
Sbjct: 381 Q 381
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S + L L +++ K + + S + D+F GQL
Sbjct: 371 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENI 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>gi|397635885|gb|EJK72050.1| hypothetical protein THAOC_06457, partial [Thalassiosira oceanica]
Length = 528
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 56/375 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CFLN+++Q L + P R + + G ++
Sbjct: 108 GLSNLGNTCFLNSSVQCLSNTIPLTDYFLGYDYRS--EINHDNFLGSKGALA-------- 157
Query: 78 SSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SS + + L +G+ +SP F++ L F P S +Q DAQE L++++D MH
Sbjct: 158 SSYAEVVKHLWLGQGAQHYSPGRFKSSLAKFAPQFDGS-----QQHDAQELLAYLLDGMH 212
Query: 135 DELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
++L +++ E +G+N + ++A W +++S V D+F
Sbjct: 213 EDLNRVKSKPYIEDDDCDGSNDDVDAIA---AWSNYLRRDQSIVV-----------DLFQ 258
Query: 191 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
GQL+S + K S F+ L L + ++ T++D L LF E L G
Sbjct: 259 GQLRSRMTCSVCGKVSVKFDSFMYLSLPVTAD-CRTLDDCLGLFCEEEYLSGDDAWYCPR 317
Query: 250 AGV-VTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLGRDLLVTPSA 307
V A K + + L ILI+HL RF + G +K+ + + +PL DL +
Sbjct: 318 CKCHVDAAKKMDLFMLPPILIVHLKRFEFSESGRRSKIERDISYPLSEW---DLSSSKKG 374
Query: 308 EGR---KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAI-----GTSKVL 358
EG Y+L A HH GHYTA A F+ +W F+D+S ++ G V
Sbjct: 375 EGGLRPVYDLYAAC-HHSGTAGGGHYTATAVNRFDGRWYRFNDSSCRSVDVDVDGDGMVR 433
Query: 359 HD---QAYVLFYKQV 370
+ AY LFY +V
Sbjct: 434 GEGRRTAYCLFYNRV 448
>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
leucogenys]
gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
Length = 355
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 169
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 170 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 227
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 228 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 286
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 287 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 345
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 346 GYILFYQ 352
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 269 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLADLFHSIAT---- 322
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 323 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 368
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + + P+ + +IF G L +
Sbjct: 369 LQEERKQEKQNG---------------RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNET 413
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 414 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 471
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 472 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 530
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 531 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 589
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 590 GYILFYQ 596
>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
Length = 361
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 31 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 82
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 83 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 130
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 131 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 176 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 233
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 234 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 292
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 293 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 351
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 352 GYILFYQ 358
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 162/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + +A + +F
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSS----SAHTALMEEF----- 109
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 110 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 160
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S + L L +++ K + + S + D+F GQL
Sbjct: 161 HNEVNRVTVRPKS---SPEGLDHLPDDE-------KGRQMWRKYLEREDSRIGDLFVGQL 210
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 211 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 268
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 269 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENI 327
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 328 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 386
Query: 367 YK 368
Y+
Sbjct: 387 YE 388
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFR---------FGNQEDAHEFLQYTVDAMQK 211
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
Length = 366
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 153/367 (41%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 89
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 90 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 136 LQEERKQEKQNGR---------------LPNGNIDTENNHSTPDPTWVHEIFQGTLTNET 180
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 297
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P +GHY A + +D WL FDD V I + +
Sbjct: 298 LVAVVVHCGSGPHRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 356
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 357 GYILFYQ 363
>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 157/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 83 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 136
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 137 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 182
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 183 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 227
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 228 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 285
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 286 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 344
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 345 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 403
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 404 GYILFYQ 410
>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 50 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 101
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 102 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 149
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 150 LQEERKQEKQNGR---------------IPNGNIDNENNNSTPDPTWVHEIFQGTLTNET 194
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 195 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 252
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 253 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 311
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 312 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 370
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 371 GYILFYQ 377
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 160/392 (40%), Gaps = 77/392 (19%)
Query: 3 AINEPVKSVKDLL------------------PRGLINSGNLCFLNATLQALMSCSPFVQ- 43
AI+ P+K KD+L P GL+N GN CF N LQ L P V
Sbjct: 152 AISRPIKQAKDVLFPYDEFVKFFNWDKPGFPPCGLLNCGNSCFANVVLQCLSFTKPLVAY 211
Query: 44 LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLK 103
LL++ R+ + L F V ++ +S + FSP + L
Sbjct: 212 LLEKGHRRECSCNDWCFLCEFENHV-----------ERTRLS----SQAFSPMNILSRL- 255
Query: 104 NFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEW 163
P++ ++ G +QEDA EF+ F +D M L G ++
Sbjct: 256 ---PNIGGTL-GYGKQEDAHEFMRFSIDTMQSVCLDEFGGEKAV---------------- 295
Query: 164 ETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEA 222
P N T Q IFGG+L+S V+ + +K S + + L ++I+ +A
Sbjct: 296 ----PPNLQETTLIQH--------IFGGRLQSEVICTKCDKISNQYENMMDLTVEIHGDA 343
Query: 223 VHTIEDALRLFSAPENLEGYRT-SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
++E+ L F+A E L+G G V A K + ++ IL + L RF G G
Sbjct: 344 A-SLEECLDQFTAKERLDGENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFG 402
Query: 282 STKLHKSVRFPLQLVLGRDLLVTPSAEGRK-YELVATVTHHGRDPSK--GHYTADARYFN 338
KL+K + FP L L ++ + +G Y+L V H + GHY + F
Sbjct: 403 --KLNKRIAFPETLNLSP--YMSEAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQ 458
Query: 339 DQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
W DD V + +VL AY+L Y +
Sbjct: 459 GNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRC 490
>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
Length = 354
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 25 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 77 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 124
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + D P P+ + +IF G L +
Sbjct: 125 LQEERKQEKQNGR----LPNGNIDNENNSPPD------------PTWVHEIFQGTLTNET 168
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 169 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 226
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 227 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 285
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 286 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 344
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 345 GYILFYQ 351
>gi|324503928|gb|ADY41696.1| Ubiquitin carboxyl-terminal hydrolase 8 [Ascaris suum]
Length = 939
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 161/365 (44%), Gaps = 42/365 (11%)
Query: 18 GLINSGNLCFLNATLQAL-----MSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
GL N GN CF+N+TLQAL + C + EL + + ++A F + D
Sbjct: 601 GLYNLGNTCFMNSTLQALFNTHSLRCVFTRRRFAELVNQRNKMGTFGVISA--AFSALMD 658
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
G+ P F L+ F +V S++ R RQ DAQEF +++D
Sbjct: 659 AVWSGAYSA-----------IRPLQF---LETFASEVNASLADR-RQHDAQEFQIYLLDA 703
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+H+++ ++ S T + E ++E +++ F S ++DIFG Q
Sbjct: 704 LHEDMNRVH-RPVSFEQNYTGMNLFEEGADYEA----------KSKMFSSSPVNDIFGCQ 752
Query: 193 LKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 250
S ++ +A S T + L +++ + TI D ++ P L+G +
Sbjct: 753 TVSQLQCGTCQAQSVTFEEVTQLSVELPTRGASTIIDCIKAHFKPVVLDGSCKWHCPKCK 812
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRF---PLQLVLGRDLLVTPSA 307
+ A + +I L K+L++HL RFS+ G K + F PL + L+ A
Sbjct: 813 ALRVATRVTRIWKLPKVLVVHLKRFSFVVDGWEKNDALIHFDCLPLDVSSVVHPLIREKA 872
Query: 308 EGRK--YELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHDQAYV 364
R + L A H GR S GHYT+ + +WL +DD SVT I + AY+
Sbjct: 873 SPRSECFNLYAVTNHSGRLNS-GHYTSVMHNEDTKEWLFYDDESVTPINADSICSKNAYI 931
Query: 365 LFYKQ 369
L++K+
Sbjct: 932 LYFKK 936
>gi|444514644|gb|ELV10629.1| Putative ubiquitin carboxyl-terminal hydrolase 50 [Tupaia
chinensis]
Length = 373
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 149/358 (41%), Gaps = 51/358 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVATAFAYLMTDM----- 99
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L N P+ + Q+DAQEFL ++++++H E
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPEF-----MKKTQQDAQEFLIYVLNELH-E 144
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
LK S +T K + T S ++ +F GQL+
Sbjct: 145 ALKTYHRKRSYEKRSTQQCC-------------RKVIASET-----SIITQLFEGQLRYD 186
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL--EGYRTSSTGNAGVV 253
+V + + + + F +L L I S+ +++D L+ F + L S +
Sbjct: 187 IVCLKCDNCAHKNEVFSILSLPIPSDYECSLQDCLQCFFQQDTLTWNNQMHCSLCDTMQE 246
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEGR- 310
TA ++ I K++I HL RF KL + +PL DL + P A
Sbjct: 247 TAVRA-SISKAPKVVIFHLKRFDIQGMTKRKLRTDIHYPLT---NLDLTPYICPVARKHP 302
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L A V H G D GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 303 KYSLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDSSVQTATAYLLFY 359
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 161/371 (43%), Gaps = 64/371 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLA------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG A E E KS +T + +IF G L +
Sbjct: 141 LEERKQEKQ-NGKLQNGTLEAPEPE--------KSDLT--------WVHEIFQGTLTNET 183
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 242 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 296
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 297 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 355
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 356 NSESGYILFYQ 366
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 145/355 (40%), Gaps = 60/355 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N+GN CF+N+ LQ L P ++LL ++D K+ +T + + + S
Sbjct: 17 GLFNTGNTCFMNSALQCLFHTPPLLRLLSA-HSKDTCKSSGFCMTCCMKYTAMRSQSSNK 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S+ F+P LK F + RQED+ EFL ++ +
Sbjct: 76 SA-------------FNPDGITRNLKAFAKSLRYG-----RQEDSHEFLRHAIEGLQRSC 117
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L Q + A T+ V +FGGQL+S V
Sbjct: 118 LAGQPQKVDPKLAETSWVH------------------------------QLFGGQLRSRV 147
Query: 198 KAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG-VVTA 255
+G S T L L LDI+ + +++DAL+ F AP+ L+G + V A
Sbjct: 148 HCKGCGHNSDTYDSILDLSLDIHRTS--SLKDALKSFVAPDYLKGSDKYKCDHCKKYVNA 205
Query: 256 KKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
+K I +L +HL RFS +GS+ + LH L+ + + + G +Y L
Sbjct: 206 EKRFTINKAPLVLTIHLKRFSPFGSKLTNLLHYDEHITLKPYM------SEGSFGPRYSL 259
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
+ H G P+ GHY + + +W +D SVT + AY+L Y Q
Sbjct: 260 YGVICHSGSGPNSGHYFSFVKSKQGRWYEMNDESVTPCSKPYPMLKTAYMLMYIQ 314
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 125/260 (48%), Gaps = 28/260 (10%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
Q+DAQEFL F++D +H+E+ ++ S G L +E++ + + K V R
Sbjct: 419 QQDAQEFLRFLLDGLHNEVNRV---SVRPRGTAEDFDHLQDEEKGKKMWSK---YVERED 472
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFLLLHLDIYSEAVHTIE--DALRLFSA 235
S + D+F GQLKS + +TV PF L L I ++ + D +RLF+
Sbjct: 473 S----KIVDLFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPISKKSYGEVSLMDCMRLFTK 528
Query: 236 PENLEG------YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSV 289
+ L+G YR + K +IQ KIL+LHL RFS + S KL V
Sbjct: 529 EDVLDGDEKPTCYRCKARRRC-----TKKFRIQKFPKILVLHLKRFSEARRTS-KLSTFV 582
Query: 290 RFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QWLHFDDAS 348
FPL+ + R+ S Y L A H G GHYTA R N +W F+D+
Sbjct: 583 NFPLKDLDLREFASGNSTNA-MYNLYAVSNHSG-TTMGGHYTAYCRNPNSGEWYTFNDSR 640
Query: 349 VTAIGTSKVLHDQAYVLFYK 368
VT + +S+V AYVLFY+
Sbjct: 641 VTPMSSSQVRSSDAYVLFYE 660
>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 359
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 30 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKENLLTCLA------DLFHSI 81
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 82 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 129
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + D P P+ + +IF G L +
Sbjct: 130 LQEERKQEKQNGR----LPNGNIDNENNSPPD------------PTWVHEIFQGTLTNET 173
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 174 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 231
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 232 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 290
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 291 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 349
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 350 GYILFYQ 356
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 160/371 (43%), Gaps = 59/371 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
LQ E + N LV + G K TQ + + +IF G L +
Sbjct: 139 -LLQEEKSQERQQNGKLVQNGGGGVGGSDGGK------ETQQ---TWVHEIFQGTLTNET 188
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 189 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 246
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 247 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 301
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 302 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 360
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 361 NSESGYILFYQ 371
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 142/356 (39%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG+L+S
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 345
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 346 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 149/362 (41%), Gaps = 57/362 (15%)
Query: 13 DLLPR--GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD 70
+++P GL+N GN CF+N+ LQ + P VQ L + + L V+
Sbjct: 119 NIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVAR 178
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFI 129
P+ G+ + F PS +++LK + RP RQEDA EF+ ++
Sbjct: 179 -AYPNKGTKR---------ASAFKPSGIQSMLKVISSHF------RPYRQEDAHEFMRYL 222
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D L+ KN +R S + IF
Sbjct: 223 VDAWQKSCLQ---------------------------NHKNLDHPSRETS----VVHRIF 251
Query: 190 GGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG L+ ++ + K S T Q L L +D ++ D+L+ F E L
Sbjct: 252 GGYLRQQILCSVCKKPSNTYQALLDLSVDAKGS---SLADSLKHFVHAEKLTKQNKYRCE 308
Query: 249 NAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
N +V A K + I IL +H RF++ S+K+ K + +P LG + P+
Sbjct: 309 NCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG-PYMSDPNC 367
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
YEL+ + H G GHY + + N WL FDD V+ +VL+ QAY+L Y
Sbjct: 368 SCW-YELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQY 426
Query: 368 KQ 369
K+
Sbjct: 427 KR 428
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 36/359 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVG-FVSDFDTPS 75
GL N GN CF+N+ LQ L + P ++ L+ + DI TL+ G + F
Sbjct: 580 GLRNIGNTCFMNSVLQCLSNTRPLLEYLVDDKYNSDINT----TLSCMKGALIKAF---- 631
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
S K+ D + + ++ ++ F P Q+DAQEFL ++++ +H+
Sbjct: 632 -ASVIKELWRSGDRDCVVNTTALKSQVQRFAPRFMGY-----SQQDAQEFLRYLLEGLHE 685
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
++ ++ + I L E D+ + K A +R S + DIF GQLKS
Sbjct: 686 DVNRVTVKPKPI---------LTEIDDSLSDSAKAAEAWSRYLRTEDSRVGDIFVGQLKS 736
Query: 196 VVKAQGN-KASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVV 253
++ S T PF L L I S + ++ L+ F E L+G + GV
Sbjct: 737 TLRCTHCLHDSVTFDPFWDLSLPIPSRTGNLKLQQCLQHFVREEELDGDEKPTCSKCGV- 795
Query: 254 TAKKSVKIQTLSK---ILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
+K +K T+ K +L+LHL RFS + KL V FPL + +P+
Sbjct: 796 -RRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGKLSVVVEFPLSGLDMSPFAASPTHAT- 853
Query: 311 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G S GHYTA ++ + W ++D+ VT I + ++ +AYVLFY+
Sbjct: 854 -YNLYAVSNHSGTTYS-GHYTAYCKHPYTGDWHEYNDSRVTPIRSRDIVSAEAYVLFYE 910
>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
Full=Deubiquitinating enzyme 12-B; AltName:
Full=Ubiquitin thioesterase 12-B; AltName:
Full=Ubiquitin-specific-processing protease 12-B
Length = 370
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 111
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 112 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG+L+S
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +A + AL+ F+A E L+G Y+
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 247
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 304
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 305 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
Full=Deubiquitinating enzyme 12-A; AltName:
Full=Ubiquitin thioesterase 12-A; AltName:
Full=Ubiquitin-specific-processing protease 12-A
gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
Length = 370
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNSAPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 163/370 (44%), Gaps = 54/370 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINEI 125
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+L + S ++ + + T G ++ P+ + +IF G L S
Sbjct: 126 ILAERNAGPSNGNPKSSSQGGSTRNGTGTNGANSE----------PTWVHEIFQGILTSE 175
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-AGVVT 254
+ S+ + F L +D+ +I LR FS E L N
Sbjct: 176 TRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCCSYQE 233
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGR 310
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 234 AQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPD---R 290
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---------LH-- 359
Y+L A V H G P++GHY + + + WL FDD V I S + +H
Sbjct: 291 LYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKS 349
Query: 360 -DQAYVLFYK 368
+ Y+LFY+
Sbjct: 350 SETGYILFYQ 359
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 143/356 (40%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 60 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHVK------- 112
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 113 -------TALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 160
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG+L+S
Sbjct: 161 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 190
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +A + AL+ F+A E L+G Y+
Sbjct: 191 VKCTQCSHCSNKFDPFLDLSLDI-GKATSLVR-ALQNFTAEELLDGGEKQYQCQRCRKK- 247
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 248 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 304
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 305 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 360
>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
Length = 376
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLS------DLFHSI 97
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 98 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 145
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 146 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 190
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 191 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 248
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 249 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 307
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 308 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 366
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 367 GYILFYQ 373
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 152/367 (41%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT T
Sbjct: 157 GLVNFGNTCYCNSVLQALYFCRPFRDKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 210
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 211 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 256
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG P + P+ + +IF G L +
Sbjct: 257 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 300
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 301 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 358
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 359 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 417
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 418 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 476
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 477 GYILFYQ 483
>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12 [Pongo abelii]
Length = 362
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 158/366 (43%), Gaps = 52/366 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 31 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 82
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 83 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 130
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 131 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 175
Query: 198 KAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAK 256
+ + ++ + + + L + + +I LR FS E L Y+ A
Sbjct: 176 RCLTCETISSTKMKIFIDLSVDVQQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAH 235
Query: 257 KSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+L
Sbjct: 236 KRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYDL 294
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQA 362
VA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 295 VAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSESG 353
Query: 363 YVLFYK 368
Y+LFY+
Sbjct: 354 YILFYQ 359
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 147/363 (40%), Gaps = 64/363 (17%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPS 75
P GL N GN C+LN+ LQ L P L+ + + S
Sbjct: 16 PLGLKNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCNS----------------LAS 59
Query: 76 GGSSKKKNISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
G + +L+ I R S PS + LK F RQEDA EFL
Sbjct: 60 GDRKRDCPFCILEKQIVRSLSSDLAHDVPSKIRSCLKIFAEHFRCG-----RQEDAHEFL 114
Query: 127 SFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
+++D H+ L+L+ S W+ + +V +
Sbjct: 115 RYVIDACHNTCLRLKKLS------------------WKGIENGGDGSVVKK--------- 147
Query: 187 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 245
IFGG L+S VK N S V + + LD+ + +++ DA++ F PE L+G
Sbjct: 148 -IFGGALQSQVKCLCCNCESNKVDEIMDISLDVLNS--NSVRDAMQKFFQPEVLDGNNKY 204
Query: 246 STGNAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVT 304
N +V A+K + + +L++ L RF G G K+ K++ F LVL + T
Sbjct: 205 KCENCKKLVAARKQMSVLQAPNVLVIQLKRFE-GIFGG-KIDKAIAFEEVLVLSSFMSKT 262
Query: 305 PSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
KY L + H G GHY A + QW +D+ VT +V+ ++AY+
Sbjct: 263 SQDPQPKYNLFGIIVHSGYSLEAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYI 322
Query: 365 LFY 367
LF+
Sbjct: 323 LFF 325
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 90 GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL--LKLQGESTSI 147
G SP+ F + ++ + P Q+DAQEFL +++ +H+++ +++Q T +
Sbjct: 53 GSAISPTEFRSQIQKYAPRFMGY-----SQQDAQEFLRYLLQGLHEDVNRVRIQPRGTCL 107
Query: 148 NGANTALVSLAEEDE-WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKAS 205
+ +L + E W R S + D+F GQLKS +K + S
Sbjct: 108 PEIDGSLSDHQKAAESWR-----------RYLRVDDSRIVDLFVGQLKSTLKCSECGHKS 156
Query: 206 ATVQPFLLLHLDIYSE--AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT-AKKSVKIQ 262
T PF L L I T++ L F+ E L+G + K++ I
Sbjct: 157 VTFDPFWDLSLPISDSRCTASTLQQCLEYFTKEEVLDGDEKPTCDQCKKRQRMTKNLSIW 216
Query: 263 TLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR----KYELVATV 318
KIL+LHL RF + +KL +V+FPL+ + D+ S G KY L+
Sbjct: 217 KCPKILVLHLKRFGNSERYRSKLETNVQFPLRNL---DISAFMSNGGDSHFCKYNLIGVS 273
Query: 319 THHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
H G S GHYTA N QW +DA V+ +G S+V+ +AYVLFY+
Sbjct: 274 NHSGSTHS-GHYTATCLNPINRQWYSCNDARVSEVGESRVVSSEAYVLFYE 323
>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
[Rattus norvegicus]
gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
norvegicus]
gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
norvegicus]
Length = 363
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 150/344 (43%), Gaps = 43/344 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + L + P+ LT D
Sbjct: 36 GLVNFGNTCYCNSILQALYFCRPFRDKV--LAYKSQPRKKESLLTCLA------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + E P P+ + +IF G L +
Sbjct: 136 LQEERKQEKQNG---RLRNGDVDSEDNNSTPD------------PTWVHEIFQGTLTNET 180
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 181 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 238
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 239 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 297
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 298 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAI 340
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 164/373 (43%), Gaps = 68/373 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T + D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQARKKETLLTCLS--------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKRFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N ++ E DE E K+ +T + +IF G L +
Sbjct: 140 LQEEKKQEKQNGKLQNGSI----ESDEGE------KAELT--------WVHEIFQGALTN 181
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ +A S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 182 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 239
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 240 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATN 294
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 PDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 353
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 354 SKNSESGYILFYQ 366
>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
Length = 409
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 152/361 (42%), Gaps = 60/361 (16%)
Query: 21 NSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSK 80
N GN C++N+ LQ L + +P RD P T+ G DF +
Sbjct: 84 NLGNTCYMNSVLQCLFNTAPLAAYFVSGAFRDDINKENPLGTS--GMYLDFYFITS---- 137
Query: 81 KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLK- 139
N S P + FE V Q+D QEFL+ +MD++H+++ +
Sbjct: 138 -INFSFYLTSSPEFFTTFEGVC----------------QQDFQEFLALMMDKLHEDVCQI 180
Query: 140 -----LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L+ +I+ A A ++ W+ +N+S + ++F G K
Sbjct: 181 RHKPYLKAPDDNIDPAEAANIT------WDNHRKRNESLML-----------NLFDGMFK 223
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEG---YRTSSTGN 249
S V+ K S T + F L L + + H ++ D ++LF+ E + G +
Sbjct: 224 STVRCLVCAKDSVTYETFSNLTLPLPGNSNHCSLRDCIKLFTRAERMSGDDMWYCPRCKQ 283
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSA 307
V A K ++I L ILI+HL RF Y KL +V FP V G D+ +T
Sbjct: 284 HRV--ASKQLQIWRLPPILIVHLKRFQYDGMWRQKLQTAVSFP---VDGLDMSGYITGPT 338
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
+ Y L H+G GHYTA + N +W FDD VT + + ++ AY+LF
Sbjct: 339 KRPAYHLYGVSNHYGTM-HGGHYTAFCKNAHNQRWFKFDDQVVTEMSANDIVSSAAYLLF 397
Query: 367 Y 367
Y
Sbjct: 398 Y 398
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 161/359 (44%), Gaps = 37/359 (10%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + T TA + +
Sbjct: 58 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS-STHTALMEEFAKLIQAIW 116
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
SS +S PS F+ ++ + P Q+DAQEFL F++D +H+E
Sbjct: 117 TSSPNDVVS---------PSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 162
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ ++ T+ + + +DE K + R S + D+F GQLKS
Sbjct: 163 VNRV----TARPKPSPENLDHLPDDE------KGRQMWRRYLEREDSRIGDLFVGQLKSS 212
Query: 197 VKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNA 250
+ +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 213 LTCTDCGFCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCR 270
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 271 ARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHA 329
Query: 311 KYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LFY+
Sbjct: 330 VYNLYAVSNHSG-TTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 387
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 143/358 (39%), Gaps = 59/358 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAF--VGFVSDFDTPS 75
G N GN CFLN+ LQ L+ +P V L + F V + D
Sbjct: 176 GFNNVGNTCFLNSALQVLVHTAPLVSALTGTHWHSERTCYLTGRSQFCLVCVMQDLINRC 235
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G S+ P +P F LK RQED+ E L F++D M
Sbjct: 236 FGQSRS----------PLTPRGFTDNLKRIAKHFRLG-----RQEDSHELLRFVIDGM-- 278
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
++ E V P A T + + IFGG+L+S
Sbjct: 279 -----------------------QQHELAGVPPDALKARRDT-----TMIHRIFGGKLRS 310
Query: 196 -VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
V+ + AS T + FL L LDI + + + DALR F P++L G Y+ +
Sbjct: 311 RVLCNKCGHASDTFESFLDLSLDI--QGLDHLRDALRRFFQPDDLRGQNKYKCEACTR-- 366
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K IQ+ ++L LHL RF+ + K+ +S+ F L LGR +G +
Sbjct: 367 MVEATKQYTIQSPPQVLTLHLKRFTPLGK---KIGRSIGFDEDLNLGRHT-SEDHGKGLR 422
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L V H G P GHY A R W DD+ V+ AYVLFY +
Sbjct: 423 YRLYGIVHHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERMPRQSSTAYVLFYAR 480
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 142/354 (40%), Gaps = 61/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P +L ++ + G+ + V SG
Sbjct: 85 GLQNMGNTCFLNSALQCLTYTPPLANYMLTREHSKTCHEPGFCMMCTMQNHVIQVFANSG 144
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
K I VL+ + + K+F QEDA EFL + +D M
Sbjct: 145 NVIKP--IGVLN--------ELKRIAKHFRYGS---------QEDAHEFLRYTVDAMQKS 185
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNK-SAVTRTQSFLPSALSDIFGGQLKS 195
L P K T+ SF+ +FGG L+S
Sbjct: 186 CL-----------------------------PGTKLDRQTQATSFI----HQVFGGYLRS 212
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT-SSTGNAGVV 253
VK KA S T PFL + L+I + + AL F PE L+G T +V
Sbjct: 213 RVKCLNCKAVSDTFDPFLDITLEI--KTAPNVSKALEQFVKPEQLDGENAYKCTKCKKMV 270
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA K I + +L L L RF+ S G K+ K V++ L L R + E + Y
Sbjct: 271 TASKRFTIHRSANVLTLSLKRFANFSGG--KITKDVKYLEHLDL-RPFMSQSQGEPQLYG 327
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + N QW +D+SV+ VL+ QAYVLFY
Sbjct: 328 LYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLFY 381
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 142/356 (39%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPK-AGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+LN+ LQ L PF LQ + + + AG+ L A V
Sbjct: 101 GLQNLGNTCYLNSVLQCLTYTEPFAAYLQSGKHKSSCRTAGFCALCALQNHV-------- 152
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G+ +PS L+ + NS RQEDA E + +++ MH
Sbjct: 153 ------KTALQSTGKIVTPSQIVKNLRCISRSFRNS-----RQEDAHELMVNLLESMHKC 201
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG+L+S
Sbjct: 202 CLPSGVPSESPSAYEKSLV------------------------------HKIFGGRLRSQ 231
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI ++ AL+ F+A E L+G Y+
Sbjct: 232 VKCTQCSHCSNKFDPFLDLSLDIGKAT--SLVRALQNFTAEELLDGGEKQYQCQRCRKK- 288
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK I +L +HL RFS + K+ K V F L L + + K
Sbjct: 289 -VVAKKKFTIDKAPYVLTIHLKRFSPFNP-REKIDKKVDFQPMLDL-KPFISDSKGADFK 345
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H G + GHY R + W + DD V + + VL +AY+LFY
Sbjct: 346 YSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQKAYMLFY 401
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 145/376 (38%), Gaps = 67/376 (17%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLL--QELRTRDIPKAGYPTL 61
IN V+ + P GL N GN CFLN+ +Q L +P V L QE TR+ G+ +
Sbjct: 79 INTQWTRVRRMGP-GLSNLGNTCFLNSVVQVLTYTAPLVNYLATQE-HTRECQMVGFCMM 136
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPR--- 118
I R F+ E++ SI+ R
Sbjct: 137 CELQR---------------------HILRTFNHQQNESIKPLCIIQRLRSIAKHLRFGH 175
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
QEDA EFL +++D M L Q E T +V
Sbjct: 176 QEDAHEFLRYVIDGMQKSCLAGQPEKMDRYSKETTIVH---------------------- 213
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
IFGG +S V+ + + S T P + + +DI ++ A++ E
Sbjct: 214 --------GIFGGYYRSQVQCLKCHNTSNTFDPLMEIMVDIKHSP--SVVRAIQRMCKAE 263
Query: 238 NLEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ 294
L+G Y+ V A K V I IL + L RF Y K+ K + +
Sbjct: 264 LLDGDNLYQCPRCKKK--VPAHKQVLIHRPPNILTIQLKRFDYHHMFGGKVSKEITYTEH 321
Query: 295 LVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGT 354
L L R + P KY+L + H G + GHY R ND W + +D+ V +G
Sbjct: 322 LDL-RPFMTNPKGPPLKYKLYGVLVHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGL 380
Query: 355 SKVLHDQAYVLFYKQV 370
+ VL QAY+LFY +V
Sbjct: 381 NTVLAQQAYLLFYSRV 396
>gi|395737001|ref|XP_003776847.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Pongo abelii]
Length = 997
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 112/251 (44%), Gaps = 13/251 (5%)
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
Q+D+QEFL F+MD +H++L K T N L + A + +
Sbjct: 735 QQDSQEFLLFLMDGLHEDLNKTDNRKTYKEENNDHLNYFKAAEH----------AXQKHK 784
Query: 179 SFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPE 237
S + +F GQ KS V+ +K S T + F+ L L I S + T+ D LRLFS E
Sbjct: 785 RLNESIIVVLFQGQFKSTVQCLTRHKKSRTFEAFMYLSLLIASTSNCTLXDCLRLFSKEE 844
Query: 238 NLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVL 297
L + +I L +L++HL FSY + KL SV FPL+ +
Sbjct: 845 KLIDNNRFYCNHCRAQWDSXKEEIWKLPPVLLVHLKHFSYNGRWKQKLQTSVDFPLENLA 904
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSK 356
++ P +KY L + H G GHYTA + Q W FDD ++ I S
Sbjct: 905 LSQYVIGPKNNLKKYNLFSVSDHCG-GLDGGHYTAYCKNAAKQRWFKFDDHEISDISVSS 963
Query: 357 VLHDQAYVLFY 367
V AY+LFY
Sbjct: 964 VKSSAAYILFY 974
>gi|11414862|dbj|BAB18534.1| deubiquitinating enzyme UBPY [Mus musculus]
Length = 1080
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 152/356 (42%), Gaps = 33/356 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L +MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLSLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
++L K N L E G ++ + + + S + +F GQ K
Sbjct: 844 EDLNKADNRKRHKEENNEHLD--------EPAG--GRARLQKHKQLNESIIRLLFQGQFK 893
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 894 ATVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRAR 953
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY
Sbjct: 954 RDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKY 1013
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1014 NLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>gi|449517900|ref|XP_004165982.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 621
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA--FVGFVSDFDTPS 75
GL N GN CF+NA LQ L +PFV+ L+ D+P T+T F F+ D+
Sbjct: 70 GLANLGNTCFINAILQCLTHTAPFVEGLRSA-NHDMPCNSKITVTTNTFSLFLGSNDSVV 128
Query: 76 GGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ +N S E + D +S R +QEDA EF+ +D+
Sbjct: 129 DEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDF-SSFFWRYQQEDAHEFMQCFLDK 187
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ ++ + S +E+D+ ++ +FGG+
Sbjct: 188 LERCMVSEGKDRVS-----------SEDDD---------------------LVNKVFGGR 215
Query: 193 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS--STGN 249
L S + S T +P + L L+I E V ++ AL F+ E + T
Sbjct: 216 LISNLCCCNCGHCSETHEPLVDLSLEI--ENVDSLSSALESFTKVERIGDPETKFKCENC 273
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V +K +K++ + + HL RF S K+ K + FPL+L L L AE
Sbjct: 274 KEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEV 333
Query: 310 R-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
KYEL A V H G + GHY + R D W DD+ VT++ VL +AY+L YK
Sbjct: 334 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYK 393
Query: 369 Q 369
+
Sbjct: 394 R 394
>gi|449462061|ref|XP_004148760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cucumis
sativus]
Length = 676
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 152/361 (42%), Gaps = 45/361 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA--FVGFVSDFDTPS 75
GL N GN CF+NA LQ L +PFV+ L+ D+P T+T F F+ D+
Sbjct: 125 GLANLGNTCFINAILQCLTHTAPFVEGLRSA-NHDMPCNSKITVTTNTFSLFLGSNDSVV 183
Query: 76 GGSSK---KKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ +N S E + D +S R +QEDA EF+ +D+
Sbjct: 184 DEELRICIHRNFVFASKKLHLDLSKSEIKITTLALDF-SSFFWRYQQEDAHEFMQCFLDK 242
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+ ++ + S +E+D+ ++ +FGG+
Sbjct: 243 LERCMVSEGKDRVS-----------SEDDD---------------------LVNKVFGGR 270
Query: 193 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS--STGN 249
L S + S T +P + L L+I E V ++ AL F+ E + T
Sbjct: 271 LISNLCCCNCGHCSETHEPLVDLSLEI--ENVDSLSSALESFTKVERIGDPETKFKCENC 328
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
V +K +K++ + + HL RF S K+ K + FPL+L L L AE
Sbjct: 329 KEEVWVEKQLKLEKIPLVTTFHLKRFKADSSFVEKIEKHLEFPLELDLKPYTLGGKDAEV 388
Query: 310 R-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
KYEL A V H G + GHY + R D W DD+ VT++ VL +AY+L YK
Sbjct: 389 ELKYELYAIVEHTGFSSTSGHYFSFVRSSPDTWHRMDDSLVTSVTEEYVLSREAYILLYK 448
Query: 369 Q 369
+
Sbjct: 449 R 449
>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
Length = 366
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + + V+ AEE+ + + + + +IF G L +
Sbjct: 137 QEEKKQEKQNGKLKNGNVNEAEENSKQEL----------------TWVHEIFQGTLTNET 180
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S E
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGEAIN 291
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
mulatta]
Length = 626
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 154/367 (41%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT T
Sbjct: 296 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLADLFHSIAT---- 349
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 350 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 395
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 396 LQEERKQEKQNG---------------RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNET 440
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 441 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 498
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 499 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 557
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 558 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 616
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 617 GYILFYQ 623
>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
Length = 526
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 166/397 (41%), Gaps = 68/397 (17%)
Query: 17 RGLINSGNLCFLNATLQALMS-----------------C-------------SPFVQLLQ 46
RGL+N G CF++ +Q L+ C S F +
Sbjct: 147 RGLVNMGATCFMSVIVQTLIHNPLIRNDFLAQNHSLGLCALKRAIADGTITYSDFCDYYE 206
Query: 47 EL------RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEA 100
EL +RD+P L+ + + + +P+ N + FS A
Sbjct: 207 ELPETIQRESRDLP------LSTLITWANATLSPN-----PNNCIACALDDCFSKFYASA 255
Query: 101 VLKNFTP--------DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANT 152
++ + P ++ ++G Q+DA EF F+++++H L E + +
Sbjct: 256 TVQGYGPVSLMISSWNINRQLAGY-SQQDAHEFWQFLVNELHGSSLVRVEEGLDEDRGAS 314
Query: 153 ALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPF 211
+ + + ++ W+++ + T + + FGG L+S G + S T P
Sbjct: 315 SDIPVQFKNTWDSISESGSCSDTSDCTCISHR---TFGGTLQSTATCNGCSHTSHTYDPL 371
Query: 212 LLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILH 271
+ L L I + ++ L ++APE +E + + + V K++ ++ +L
Sbjct: 372 MDLSLQIPLKGQASLSSCLDKYTAPEQMEYFCENCKSHESV---SKTLALKKPPVVLSFQ 428
Query: 272 LMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELVATVTHHGRDPSKGHY 330
L RF + S+K+ V FPL L + T S E G YEL A V HHG + GHY
Sbjct: 429 LKRFQHTGSSSSKIDTHVEFPLYLDMSP---YTCSQESGLVYELYAVVCHHG-SLNTGHY 484
Query: 331 TADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
T + + W +FDD ++T + +VL +AY+LFY
Sbjct: 485 TCMVKGRDMHWYNFDDVTITRVDVQQVLAARAYLLFY 521
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 146/354 (41%), Gaps = 62/354 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++NA+LQ L P + + + PT G + T
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYM-------LSREHSPTCHRHKGCM--LCTMQAH 131
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
++ +I GR PS +A+ +F R +QEDA EFL F +D M
Sbjct: 132 ITRALHIP----GRVIQPS--QALAADF---------HRGKQEDAHEFLMFTVDAMKKAC 176
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L P +K ++ + + IFGG +S +
Sbjct: 177 L-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQI 205
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTA 255
K + S T P+L + LDI +A +++ AL PE L G G A
Sbjct: 206 KCLHCHGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPA 263
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELV 315
K++ + T +K+LIL L RFS +KL K+V +P L + + + + Y L
Sbjct: 264 SKTLTLHTSAKVLILVLKRFS--DVTGSKLAKNVHYPECLDM-QPYMSQQNTGPLVYVLY 320
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 321 AVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
guttata]
Length = 366
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 159/373 (42%), Gaps = 67/373 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIADIL 136
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + + ++ AEE+ NK +T + +IF G L +
Sbjct: 137 QEEKKQEKQNGKLKNGNMNEAEEN--------NKQELT--------WVHEIFQGTLTNET 180
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVN 291
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 146/364 (40%), Gaps = 58/364 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFV-QLLQELRTRDIPKAGY-PTLTAFVGFVSDFDT-- 73
GL N GN C+ NA +QAL+ P V + L + P G+ + AFV
Sbjct: 132 GLRNLGNTCYANAVIQALLHTPPLVLKALSDGCASATPHTGFFDAMAAFVRLCRQLLVVR 191
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
PSG ++ +P+ +++N GR QEDA EFL F+++ +
Sbjct: 192 PSGTNA-------------VAPT---EIIRNLPAICRRYRVGR--QEDAHEFLRFLLESI 233
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSA-VTRTQSFLPSALSDIFGGQ 192
S S G DE + + +TR IFGG
Sbjct: 234 --------ARSCSRRGERRLPSQQVSSDELVASDCNHGTGWITR-----------IFGGL 274
Query: 193 LKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNA 250
L+S V+ S + FL L LD A +I L F+A E L G R
Sbjct: 275 LRSRVICRTCQHKSYRTERFLDLSLDFRQSA--SISKCLEHFAATELLAGRNRYDCAACH 332
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFP----LQLVLGRDLLVTPS 306
G A+K ++I+ +L LHL RF KL VRF L+ + + + P
Sbjct: 333 GYSDAEKQIRIRQAPVVLTLHLKRF----HALRKLSGVVRFSEWLDLRPYMAEEFVAGPV 388
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A + H G S GHY A R + WL DD ++ +G V QAY+LF
Sbjct: 389 M----YRLFAVIVHEGHSLSSGHYYAFVRSASGAWLRCDDEHLSRVGIGSVFAQQAYLLF 444
Query: 367 YKQV 370
Y +V
Sbjct: 445 YLRV 448
>gi|449680173|ref|XP_002165294.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12A-like [Hydra
magnipapillata]
Length = 396
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 166/369 (44%), Gaps = 44/369 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + + K LT D +
Sbjct: 47 GLVNFGNTCYCNSVLQALYFCQPFRE--KVLSYKPLNKRKENLLTCLS------DLFNSI 98
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ V+ +P F A L+ N + Q+DA EFL+++++ + D L
Sbjct: 99 ATQKRKTGVI------APKRFVARLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 146
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + +L S++ + + S T + P+ + D+F G L +
Sbjct: 147 LQGEKLKEKEKEKLGSLSSVSSKASGSSGYSTTTSQFTLKEPPEPTWVHDLFEGTLTNET 206
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ + S+ + FL + +D+ E +I L+ FS E L + Y G+
Sbjct: 207 RCLCCETLSSKDESFLDISVDV--EQNTSISYCLKNFSFTETLCSEQKYFCEVCGSKQ-- 262
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A+K + ++ L +IL LHL RF Y Q TKL V FPLQL L + L + R
Sbjct: 263 EAQKRMMVKKLPQILALHLKRFKYVEQQQRFTKLSHRVTFPLQLRLF-NTLENATHRDRL 321
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+L A V H G P++GHY A + N WL FDD V I T +
Sbjct: 322 YDLSAIVVHCGTGPNRGHYIAIVKSHN-IWLLFDDDIVDKIETRSIEDFFGLTTDVQKNS 380
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 381 ECGYILFYE 389
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 141/355 (39%), Gaps = 68/355 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+NA LQ L P +L T+ G+ + + + G
Sbjct: 98 GLQNLGNTCFVNAALQCLTYTPPLANYMLSREHTKTCHAGGFCVMCIMQAHIIQALSHPG 157
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K I+V+ F QEDA EFL + +D M
Sbjct: 158 DAIKP--IAVITSHFRFG-----------------------NQEDAHEFLQYTLDAMQKA 192
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L+ E A T + IFGG L+S
Sbjct: 193 CLQGSYELDRHTQATTLIY-------------------------------QIFGGYLRSR 221
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK + S T +L + L+I + V ++ +AL F PE LEG Y+ S + +
Sbjct: 222 VKCLNCRGVSDTFDLYLDVTLEI--QDVRSVNEALAQFVKPEQLEGENCYKCSKCNS--M 277
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A KS+ I S +L L L FS + +K+ K V++P L + R + PS E +Y
Sbjct: 278 VPASKSLSIHRPSNVLTLTLKGFSNCT--GSKIAKIVKYPEHLNI-RAYMSQPSGEAMQY 334
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + + N W +D V+ S VL QAY+LFY
Sbjct: 335 SLYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFY 389
>gi|291403016|ref|XP_002717774.1| PREDICTED: Putative ubiquitin carboxyl-terminal hydrolase 50-like
[Oryctolagus cuniculus]
Length = 373
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 143/355 (40%), Gaps = 45/355 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLGSISPLVEYFLSGKYITALQKDCSDVATAFAYLMTDM----- 99
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
L K + G+ A +E S ++ +F GQL
Sbjct: 146 LKKYHRRRSYEKGSTQRCCRKAIANE-------------------TSIITQLFEGQLNYG 186
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT--SSTGNAGVV 253
++ + + + F +L L I SE +++D L+ F + L S
Sbjct: 187 IICLKCENCTYRNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA ++ I KI+I HL RF KL + +PL + + + KY
Sbjct: 247 TAVRA-SISKAPKIIIFHLKRFDIQGTVKRKLRTDIHYPLTNLDLTPYICPVFRKHPKYN 305
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 306 LCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPNTSVQTSTAYLLFY 359
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 62/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVR------- 160
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++++ N GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 161 -TARQAN------GRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------KIFGGSLRSQ 238
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLK 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
>gi|149692387|ref|XP_001501949.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Equus caballus]
Length = 373
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 140/354 (39%), Gaps = 43/354 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L N P + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
L K + G+ A +E S +TR +F GQL S
Sbjct: 146 LKKYHRRRSCEKGSVPRCCRKAIANE--------TSIITR-----------LFEGQLNYS 186
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE-GYRTSSTGNAGVVT 254
V + + F +L L I SEA +++D L+ F + L R +
Sbjct: 187 VTCLTCENCTYKNEVFTVLSLPIPSEAQCSLQDCLQCFFQQDTLTWNNRIHCSFCETKQE 246
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
I K +I HL RF KL ++ +PL + + + KY L
Sbjct: 247 TAVRASISKAPKTVIFHLKRFDILGTMKRKLRTNIHYPLTNLDLTPYICPIFRKHSKYNL 306
Query: 315 VATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V H G D GHYTA + W FDD V+ I + V AY+LFY
Sbjct: 307 CAVVNHFG-DLDGGHYTAFCKNSVTHAWYSFDDTRVSEIPDTSVQTATAYLLFY 359
>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
Length = 379
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 171/374 (45%), Gaps = 47/374 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + ++ + TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--RRTKETLLSCLA-----DLFYSI 77
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 L--KLQGESTSINGANTALVSLAEEDEWETVG---PKNKSAVTRTQSFLPSALSDIFGGQ 192
L + Q ++ G++++ + ++G P++ S + P+ + +IF G
Sbjct: 127 LAERNQAKAAGGKGSSSSSSGNGTAGQNGSLGPGTPQDGSGGVAGNNTEPTWVHEIFQGI 186
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN-A 250
L S + S+ + F L +D+ +I LR FS E L N
Sbjct: 187 LTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDNCC 244
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPS 306
A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P
Sbjct: 245 SYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD 304
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 305 ---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDFYGLTSD 360
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 361 IQKSSETGYILFYQ 374
>gi|194764571|ref|XP_001964402.1| GF23156 [Drosophila ananassae]
gi|190614674|gb|EDV30198.1| GF23156 [Drosophila ananassae]
Length = 899
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 169/400 (42%), Gaps = 86/400 (21%)
Query: 2 KAINEPVKSVKDLLP----------RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTR 51
KA++ P + V+D P GL N GN C++N+ LQ L
Sbjct: 542 KAVSSPAR-VRDFSPVKGQNVGRGLTGLKNLGNTCYMNSILQCL---------------- 584
Query: 52 DIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPN 111
+ P LT + +SD S + N V++ ++ K
Sbjct: 585 ----SNTPQLTEYC--ISDKYKSYISRSNRTNGQVIEEVAALIKELWNGQYKCVASRDLR 638
Query: 112 SISGRPR-------QEDAQEFLSFIMDQMHDEL--LKLQGESTSINGANTALVSLAEEDE 162
+ G+ + Q+D+ EFL+ +MD +H +L L + + +I+ + A + + E
Sbjct: 639 YVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVARQRETISASEKAWLEFTKAKE 698
Query: 163 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSE 221
S + +F GQ+KS VK NK SAT + F L L++
Sbjct: 699 --------------------SMILHLFYGQIKSTVKCVACNKESATYECFSNLSLELPPN 738
Query: 222 A-VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ 280
+ V + + ++ + E ++G+ + A K + I L +L++HL RF Y
Sbjct: 739 SNVCQLNQCMDMYFSGERIQGWNCPNCNTKR--DAIKKLDISKLPPVLVVHLKRF-YADP 795
Query: 281 GST----KLHKSVRFPLQLVLGRDLLVTP---SAEGRK-----YELVATVTHHGRDPSKG 328
G+T K +RFPL +L +TP AE R Y+L A H+G G
Sbjct: 796 GNTGAYIKKQNYLRFPLD-----NLEMTPYIARAESRAVTPKTYQLYAVSNHYG-TMEGG 849
Query: 329 HYTADARYFN-DQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
HYTA + N +W FDD V+A+ TS V+ AY+LFY
Sbjct: 850 HYTAFCKSANYGRWFKFDDQIVSALDTSNVVSSAAYILFY 889
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 146/355 (41%), Gaps = 60/355 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN CFLN+TLQ L +P V + + G+ + + SG
Sbjct: 100 GLVNMGNTCFLNSTLQCLAYTAPLVNYCFSGEHNQTCKQPGFCMMCELQRHIKRCYENSG 159
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K +A+L+ + GR QEDA EFL +++D M
Sbjct: 160 SNIKP-----------------QAILQKLKMIAKHMHWGR--QEDAHEFLRYVVDSMQKS 200
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+L NG + L ++E + ++ IFGG L+S
Sbjct: 201 IL---------NG-HAKLDKFSKE---------------------TTVVNQIFGGYLRSQ 229
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE---GYRTSSTGNAGV 252
V+ + + S T PFL + LDI + V ++E A + PE L+ Y +
Sbjct: 230 VQCLRCKEKSNTYDPFLDISLDI--KTVPSLEKAFEKYVLPEKLDCDNAYMCNRCKQK-- 285
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
V A K + +L + L RF Y K+ + V FP +L L R + E +
Sbjct: 286 VPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFPEKLNL-RPYMSNRGGEPILF 344
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G + GHY + + W +D++V + ++VL +AYVLFY
Sbjct: 345 HLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSVNRVLGAEAYVLFY 399
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 163/369 (44%), Gaps = 57/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT + T
Sbjct: 147 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLSDLFNSIAT---- 200
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 201 --QKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 246
Query: 138 LKLQGESTSINGA--NTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N +L S + DE E K +T + +IF G L +
Sbjct: 247 LQEEKKQEKQNGKLQNGSLES-SGGDEGE------KGDLT--------WVHEIFQGTLTN 291
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ +A S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 292 ETRCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQ 349
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L + + R
Sbjct: 350 EAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRM 408
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 409 YDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 467
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 468 ESGYILFYQ 476
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 165/379 (43%), Gaps = 72/379 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+ N+ LQAL C PF + + E + ++ PK + A + + S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCKPFREKVLEYKAKNKRPKETLLSCLADLFY-------SI 77
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ KKK S+ +P F L+ + N + Q+DA EFL+F+++ +++
Sbjct: 78 ATQKKKVGSI-------APKKFITRLRKEKEEFDNYM-----QQDAHEFLNFLINHINE- 124
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVG-PK--NKSAVTRT------QSFLPSALSD 187
+ LAE + + G PK N+ TR + P+ + +
Sbjct: 125 ------------------IILAERNAGPSNGNPKASNQGGSTRNGTGSNGANSEPTWVHE 166
Query: 188 IFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSS 246
IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 167 IFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFK 224
Query: 247 TGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDL 301
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 225 CDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDD 284
Query: 302 LVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV---- 357
V P R Y+L A V H G P++GHY + + + WL FDD V I S +
Sbjct: 285 AVNPD---RLYDLTAVVIHCGSGPNRGHYISIVKS-HGLWLLFDDDMVDKIEASTIEDFY 340
Query: 358 -----LH---DQAYVLFYK 368
+H + Y+LFY+
Sbjct: 341 GLTSDIHKSSETGYILFYQ 359
>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
Length = 479
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 158/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + +++ P+ LT T
Sbjct: 149 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQ--PRKKENLLTCLADLFHSIAT---- 202
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 203 --QKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 248
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + + + E P P+ + +IF G L +
Sbjct: 249 LQEERKQEKQNG---RLPNGSIDGEGSGGAPD------------PTWVHEIFQGTLTNET 293
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L ++ A
Sbjct: 294 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEHKYYCEECRSKQEA 351
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 352 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 410
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 411 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 469
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 470 GYILFYQ 476
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 155/362 (42%), Gaps = 50/362 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 75
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 76 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 126
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S N + +DE K + + S + D+F GQL
Sbjct: 127 HNEVNRVTLRPKS----NPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 176
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 177 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 234
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 235 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 293
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+ S+V AY+LF
Sbjct: 294 NHAVYNLYAVSNHSG-TTMGGHYTAYCRSPGTGEWHTFNDS-------SQVRTSDAYLLF 345
Query: 367 YK 368
Y+
Sbjct: 346 YE 347
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L +R G+ + ++ + G
Sbjct: 95 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSRTCHVKGFCMMCTMQAHITQALSHPG 154
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPRQEDAQEFLSFIMDQMHD 135
D+ +P S + N DV G QEDA EFL +I+D M
Sbjct: 155 -----------DVLKPMS-------IINEMEDVATHFHFGS--QEDAHEFLQYIVDGMQK 194
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 195 ACL---------NGSNK----LDRHTQATTL------------------VCQIFGGYLRS 223
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T +PFL + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 224 RVKCLNCKGVSDTFEPFLDITLEI--KASPSVNKALEQFVKPEQLDGENAYKCSKCKK-- 279
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + + E
Sbjct: 280 MVPASKRFTIHRSSNVLTLSLKRFANTTGG--KIAKDVKYPEYLDI-RPYMSQQNGEPII 336
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 337 YVLYAVLVHAGFNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 392
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 147/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 110 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 169
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + + ++F QEDA EFL + +D M
Sbjct: 170 -----------DVIKPMFVINEMQRIARHFRFG---------NQEDAHEFLQYTVDAM-- 207
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ +NG+N L + T+ + IFGG L+S
Sbjct: 208 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 238
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 239 RVKCLNCKGVSDTFDPYLDITLEI--KAAPSVNKALEQFVKPEQLDGENSYKCSKCKK-- 294
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 295 MVPASKRFTIHRSSNVLTLSLKRFANSTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 352 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 407
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 161/371 (43%), Gaps = 62/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIADLL 140
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + + NG L + E G K TQ + + +IF G L +
Sbjct: 141 QEEKSQERQQNG------KLVQNGGGEGEGGK------ETQQ---TWVHEIFQGTLTNET 185
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 186 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 243
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 244 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 298
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 299 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 357
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 358 NSESGYILFYQ 368
>gi|71654677|ref|XP_815953.1| ubiquitin hydrolase [Trypanosoma cruzi strain CL Brener]
gi|70881048|gb|EAN94102.1| ubiquitin hydrolase, putative [Trypanosoma cruzi]
Length = 438
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 172/379 (45%), Gaps = 48/379 (12%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
RG++N+ N CF+NAT QAL+ PF QL + + PTL ++ +
Sbjct: 80 RGILNNSNYCFMNATAQALVFLPPFAQLAI---SAVVEAELCPTLATLGKWMLSY----- 131
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFIMDQM 133
++ N V + P +AV S G+ QEDA EF+ +++ +
Sbjct: 132 -WARAPNQLVPPLSLP------KAVRGQTASSAAPSNWGKMDGSSQEDATEFMHHLLEVI 184
Query: 134 HDELLKLQGESTS-----INGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD- 187
EL L+G + I NT+L +E+ W V + + +V S L D
Sbjct: 185 QTELCALEGSYSESPTGRIRDPNTSLEGNSEKKGWTFVKGRERLSVREHCDKSRSVLLDA 244
Query: 188 IFGGQLKSVVKAQG---NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT 244
+FGG +++ +K + + AS V+ F LL +D+ A ++E AL +L+ R
Sbjct: 245 VFGGAVENHLKGKSKLKDHASVLVEGFFLLQVDVGFSAECSLEMALE-----RSLQRERV 299
Query: 245 SSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLV 303
+ A + K++K++ L +L+L L R++ ++G KL VRF LVL +
Sbjct: 300 YDSARAKDLL--KTMKLRRLPTVLLLQLQRWAVTAEGELVKLDNLVRFSKTLVLPKSTCS 357
Query: 304 --TPSAEGRKYELVATVTHHGRDPSKGHYTAD---------ARYFNDQWLHF-DDASVTA 351
T S R YELVA + H G+ +GHY A A D L F +DA V
Sbjct: 358 DNTVSNAARTYELVAFIAHRGKATERGHYVAYLANASLPTLATSQGDAALTFCNDAKVHT 417
Query: 352 IGTSKVLHDQA-YVLFYKQ 369
+ + + +A Y+L Y++
Sbjct: 418 VTMREAIEGEAVYLLVYQR 436
>gi|402223712|gb|EJU03776.1| cysteine proteinase [Dacryopinax sp. DJM-731 SS1]
Length = 434
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 165/393 (41%), Gaps = 72/393 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 71
GL N GN C++NA LQ L + PF + E R + P T AF V +
Sbjct: 72 GLKNLGNTCYMNAPLQCLSATVPFARFFLENRWQRAVNTVNPLGTRGQLAGAFAKMVQEM 131
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ N + LD P+ F + ++ P S +G Q DAQEF+SF++D
Sbjct: 132 --------WQANFTYLD------PTNFRRSVCHYAP----SFAGG-DQHDAQEFISFLLD 172
Query: 132 QMHDELLKL-----QGESTSINGANTALV--SLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
+H++L ++ + T + A + +A E EW+ ++ S V
Sbjct: 173 GLHEDLNRILQKPANDDPTPEHEAELERLPQQIAGEQEWQRYQRRDDSLVV--------- 223
Query: 185 LSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYS---EAVHTIEDALRLFSAPENLE 240
D F GQ ++ ++ +K S T F+ L L I + + T++ + F E +E
Sbjct: 224 --DYFQGQFRNKLECMTCHKTSTTYNAFMYLSLPIPTGRGMSKVTLQQCMDAFVKEEIME 281
Query: 241 -GYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGR 299
G + A K + I L +L++HL RFSY KL V FPL+ +
Sbjct: 282 KGDAWKCPHCMALRKATKQLSISRLPPVLLIHLKRFSYKGPFVDKLETLVDFPLKDLDLT 341
Query: 300 DLLVTPSAEG----------------------RKYELVATVTHHGRDPSKGHYTADARYF 337
+ + +P G +YEL A H G S GHYTA
Sbjct: 342 NYMPSPLPPGVDKGFSQSSPIKLDDPRSQIPPYRYELYAVTNHFGSLTS-GHYTAFIAS- 399
Query: 338 NDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
W++ DD+ ++ +++ AY+LFYK+V
Sbjct: 400 KGSWVYCDDSRLSNAEGREIVAKPAYILFYKRV 432
>gi|297791015|ref|XP_002863392.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
gi|297309227|gb|EFH39651.1| ubiquitin-specific protease 21 [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 135/352 (38%), Gaps = 51/352 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL NSGN CF+ + LQ P ++ L+ ++ G +
Sbjct: 143 GLYNSGNTCFIASVLQCFTHTVPLIESLRSYMYQNPCNCGNEKFCVMQALRDHIELALRS 202
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S NI F L +F+ D + QEDA EFL +D++
Sbjct: 203 SGHGINID-----------RFRDNLTHFSSDFMIN-----HQEDAHEFLQSFLDKLERCC 246
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 196
L + E SI + +V ++FGG L S +
Sbjct: 247 LDPKNEPGSILSQDMNIVD------------------------------NVFGGGLMSTL 276
Query: 197 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 256
N S T +P L L+I E V + AL F+ E LE T V T +
Sbjct: 277 CCCNCNSVSNTFEPSLGWSLEI--EDVDNLWSALESFTRVEKLEDQLTCDNCKEKV-TKE 333
Query: 257 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 315
K +K L + HL RF K+ + V FPL+L L + + E KY L
Sbjct: 334 KQLKFDQLPPVATFHLKRFKNDGVTMEKIFEHVEFPLELDLLPFMSSNQNPEVSTKYHLY 393
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V H G + GHY+ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 394 AFVEHIGIGATFGHYSTYVRSAPETWHNFDDSKVTRISEDRVLSRPAYILFY 445
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 147/365 (40%), Gaps = 63/365 (17%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 1 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 57
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 58 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 100
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
M L G E V P T Q IFGG
Sbjct: 101 MQSVCLDEFG--------------------GEKVVPPRAQETTLIQY--------IFGGL 132
Query: 193 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 248
L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G Y+
Sbjct: 133 LQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDRCD 191
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ V A K + I+ IL + L RF G G KL+K + FP LG ++ E
Sbjct: 192 D--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGP--YMSGGGE 245
Query: 309 GRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
G Y+L A + H + GHY + F W DD+ V + VL +AY+L
Sbjct: 246 GSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYML 305
Query: 366 FYKQV 370
Y +V
Sbjct: 306 LYSRV 310
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 147/365 (40%), Gaps = 63/365 (17%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 227
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 228 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 270
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
M L G E V P T Q IFGG
Sbjct: 271 MQSVCLDEFG--------------------GEKVVPPRAQETTLIQY--------IFGGL 302
Query: 193 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 248
L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G Y+
Sbjct: 303 LQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ V A K + I+ IL + L RF G G KL+K + FP LG ++ E
Sbjct: 362 D--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGP--YMSGGGE 415
Query: 309 GRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
G Y+L A + H + GHY + F W DD+ V + VL +AY+L
Sbjct: 416 GSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYML 475
Query: 366 FYKQV 370
Y +V
Sbjct: 476 LYSRV 480
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 62/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVR------- 160
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++++ N GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 161 -TARQAN------GRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------KIFGGSLRSQ 238
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLK 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFR---------FGNQEDAHEFLQYTVDAMQK 210
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRAVLNQQAYVLFY 408
>gi|145524988|ref|XP_001448316.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415860|emb|CAK80919.1| unnamed protein product [Paramecium tetraurelia]
Length = 482
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 154/362 (42%), Gaps = 26/362 (7%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTR---DIPKAGYPTLTAFVGFVSDFDTP 74
GL N GN C+ N + + P V + P +G T AFV +
Sbjct: 65 GLKNLGNTCYFNTAIHCISHTQPLVDYFLSKAYKVNSSCPTSGNIT-KAFVSLMEQIWDD 123
Query: 75 SGGSSKKKNISVLDIG---RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
++ K+ L G +P++ + L N + QED QE LS+++D
Sbjct: 124 ENCFAESKDFKQLVQGQKLKPYNKCINPIKLLNLLQKYSKRFA-LGDQEDCQELLSYLLD 182
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
+H EL + Q S SI T + +W + R S + D+F G
Sbjct: 183 LLHQELNRSQPNSKSITKDYTGEYV---DPKWAADSWGEHLKINR------SIIVDLFQG 233
Query: 192 QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
QLKS + Q S +PFL L+L I + V +I L LF PE L G N
Sbjct: 234 QLKSTCQCQECGFQSHKFEPFLFLNLPIPKQKV-SIYKCLDLFQEPELLSGSCQWKCPNC 292
Query: 251 GVVTA-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ KK +++ L LI+HL RF + + KL+ V FPL+L + + + +
Sbjct: 293 KINRDFKKQIQLWKLPNQLIIHLKRFEFHHRKQVKLNTVVEFPLELDMAQYCVDQAIS-- 350
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK--VLHDQAYVLFY 367
Y+L A H G GHY A + N+ W ++D V I K V ++ AY+LFY
Sbjct: 351 -CYQLYAVAQHDGSSYG-GHYVALCKAQNNNWYMYNDDQVFRIQDVKKMVQNEYAYMLFY 408
Query: 368 KQ 369
++
Sbjct: 409 QR 410
>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
Length = 353
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 155/369 (42%), Gaps = 63/369 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFH-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L + +S G E W + +IF G L S
Sbjct: 127 LAERNQSKPAGGKGAGDAGTPPEPTW---------------------VHEIFQGILTSET 165
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I L+ FS E L + + A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLKCFSNTETLCSDNKFKCDHCSSYQEA 223
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K + ++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 224 QKRMMLKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 280
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I +S +
Sbjct: 281 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDSSTIEDFYGLTSDIQKNS 339
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 340 ETGYILFYQ 348
>gi|395326677|gb|EJF59084.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1201
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 162/392 (41%), Gaps = 76/392 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLT------AFVGFVSDF 71
GL N GN C++N+T+Q L + PF + + R + P T AF + D
Sbjct: 845 GLKNLGNTCYMNSTIQCLSATVPFSRFFTDGRWKSAVNMVNPMGTKGVLALAFANILRDM 904
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
GG+ SP F + + P S Q D+QEFLSF++D
Sbjct: 905 WQGEGGT--------------LSPVTFRRSICSHAPQFSGS-----EQHDSQEFLSFLLD 945
Query: 132 QMHDELLKL----QGESTSINGANTALVS--LAEEDEWETVGPKNKSAVTRTQSFLPSAL 185
+H++L ++ EST A + +A E EW+ ++ S +
Sbjct: 946 GLHEDLNRILQKRNIESTPEREAELEKLPTQIASEQEWQIYRMRDDSLIV---------- 995
Query: 186 SDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVH--TIEDALRLFSAPENLEGY 242
D F GQ ++ ++ +K S T F+ L L I + T++ + F E +E
Sbjct: 996 -DFFQGQYRNRMECLTCHKTSTTYNTFMYLTLPIPTGRASKVTLQHCIDAFVKEEVMEKS 1054
Query: 243 RTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL 301
+ + + A K + + L +L++HL RFS + K+ V FPL+ G DL
Sbjct: 1055 DAWNCPHCKALRKATKQLSLSRLPPVLLIHLKRFSAKGPFTDKIETFVEFPLK---GLDL 1111
Query: 302 L------VTPSAEG---------------RKYELVATVTHHGRDPSKGHYTADARYFNDQ 340
+ P A G +Y+L A H G S GHYTA + +
Sbjct: 1112 TNYMPPPLPPGAIGVPPLSPDDPRCQLPPYRYDLYAVTNHFGTL-STGHYTA---FIASR 1167
Query: 341 --WLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
WL+ DD+ VT V+ AY+LFYK+
Sbjct: 1168 GGWLYCDDSRVTPADAKDVVGKPAYILFYKRT 1199
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 138/356 (38%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LL R + + + SG
Sbjct: 123 GLSNLGNTCFLNSALQCLTYTPPLTNYLLSREHGRTCAHGSFCMMCTMQNHMIQTFANSG 182
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K P S ++++ N GR QEDA EFL + +D M
Sbjct: 183 NAIK-----------PLS------IIRDLKKISHNLRFGR--QEDAHEFLRYTIDAMQKA 223
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L NG L + + T+ + IFGG L+S
Sbjct: 224 CL---------NG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK + S T P+L + L++ E I AL LF PE L G YR S
Sbjct: 253 VKCLECKTVSDTYDPYLDVTLEV--ERAANIVRALELFVKPEQLGGDNAYRCSMCRKK-- 308
Query: 253 VTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V A K I S +L + L RF S S G K+ K V +P L + R + P +
Sbjct: 309 VLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYPEFLDI-RPFMSEPKGDPIT 367
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N QW +D V VL+ QAYVLFY
Sbjct: 368 YGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSNIKVVLNQQAYVLFY 423
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++N+ LQ L + + DI +A + G V++ F
Sbjct: 736 GLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQDDINRAN---ILGHKGEVAEEFSV-- 790
Query: 76 GGSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ L +G + SP F+ + NS +D+QE L F+MD +
Sbjct: 791 -------VMKALWLGQYKMISPLDFKGTICKI-----NSRFSSYEHQDSQELLLFLMDGL 838
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H++L N A+ EE E A ++ + S + +F GQ
Sbjct: 839 HEDL----------NKADKRRGYKEEEIEHLDDVSAADLAWSKHKQLNESIIVALFQGQF 888
Query: 194 KSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L++ + + +++D L+LF E L +G R
Sbjct: 889 KSTVQCMSCQHKSRTFETFMYLTLEMTASSKCSLQDCLKLFHKEERLTDGNRFYCRHCKT 948
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K ++I L IL++HL RF Y + KL V FPL + ++ P +K
Sbjct: 949 HRDAIKRMQIWKLPPILLVHLKRFKYEGRWREKLQTLVDFPLDNLDLSQYVIGPKNNLKK 1008
Query: 312 YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A H+G GHYTA + +W FDD V+ I +S V AY+ FY
Sbjct: 1009 YNLYAVSNHYG-GMDGGHYTAYCKNPMKQRWFKFDDHEVSEISSSTVRSPAAYIFFY 1064
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 159/369 (43%), Gaps = 63/369 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + R+ + LT S
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIA 78
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ KKK S+ +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 79 TQKKKVGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + +S G A + P P+ + +IF G L S
Sbjct: 127 LE-RTQSKPAGGKCGA---------GDAGSPPE-----------PTWVHEIFQGILTSET 165
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + F L +D+ +I LR FS E L + + A
Sbjct: 166 RCLNCETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEA 223
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRK 311
+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D V P R
Sbjct: 224 QKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RL 280
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY + + + WL FDD V I S +
Sbjct: 281 YDLVAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSS 339
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 340 ETGYILFYQ 348
>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
porcellus]
Length = 369
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 158/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 39 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 90
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 91 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 138
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 139 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 183
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q KL V FPL+L L + + R Y+
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYAKLSYRVVFPLELRLF-NTSGDATNPDRMYD 300
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 301 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 359
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 360 GYILFYQ 366
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 145/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL + PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|395822175|ref|XP_003784399.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Otolemur garnettii]
Length = 375
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 154/375 (41%), Gaps = 56/375 (14%)
Query: 4 INEPVKSVKDLL-PRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTL 61
+NEP +S GL N GN C++NA LQ L S SP V+ L + K
Sbjct: 32 VNEPDESQPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYMTALQKDCSEVA 91
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
TAF ++D L SP +F + L N P + Q+D
Sbjct: 92 TAFAYLMTDM--------------WLGDSDCVSPEIFRSALGNLYPAF-----MKKTQQD 132
Query: 122 AQEFLSFIMDQMHDELLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
AQEFL ++++++H+ L K E SI +++ S +TR
Sbjct: 133 AQEFLIYVLNELHEALKKYHRRRSYEKRSIQRCCRKVIA------------NETSIITR- 179
Query: 178 QSFLPSALSDIFGGQLK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAP 236
+F GQL S+V + + + F +L L I E +++D L+ F
Sbjct: 180 ----------LFEGQLNYSIVCLKCENCTYRNEVFTVLSLPIPCEYECSLQDCLQCFFQQ 229
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLS---KILILHLMRFSYGSQGSTKLHKSVRFPL 293
+ L + A T +++ ++S KI++ HL RF KL ++ +PL
Sbjct: 230 DTLTW--NNQIRCAFCETNQETAVRASISKAPKIIVFHLKRFDIQGMMKRKLRTNIHYPL 287
Query: 294 QLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAI 352
+ + + KY L A V H G D GHYTA + Q W FDD V+ I
Sbjct: 288 TNLDLTSYICPIFRKHPKYNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEI 346
Query: 353 GTSKVLHDQAYVLFY 367
+ V AY+LFY
Sbjct: 347 PDTSVQTATAYLLFY 361
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 147/367 (40%), Gaps = 70/367 (19%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
+L P GL+N GN C+ NA LQ L P LLQ L ++ PK + + F +
Sbjct: 393 ELSPFGLMNCGNSCYANAVLQCLTFTRPLASYLLQGLHSKACPKEDWCFICEFECLI--L 450
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ G S P SP + ++ + G R+EDA EFL + +D
Sbjct: 451 EAREGKS-------------PLSPMGILSQIQRIGSHL-----GHGREEDAHEFLRYAVD 492
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK G + +T LV L FGG
Sbjct: 493 TMQSVCLKDTGVVGPL-AEDTTLVGLT------------------------------FGG 521
Query: 192 QLKSVVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
L S +K + S + + L ++I + + T+E+AL F+A E L+G G
Sbjct: 522 YLLSKIKCMKCQGKSERCERMMDLTVEIDGD-IGTLEEALAQFTATEILDGENKYQCGRC 580
Query: 251 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
AKK + + IL + L RF + G KL+KSVRFP L L TP G
Sbjct: 581 RSYEKAKKKLMVLEAPNILTIVLKRFQSSNFG--KLNKSVRFPETLNL------TPYMSG 632
Query: 310 RK-----YELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
Y L A V H GHY + F W DD++VT + +VL + A
Sbjct: 633 TDDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGA 692
Query: 363 YVLFYKQ 369
Y+L Y +
Sbjct: 693 YMLLYAR 699
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 160/375 (42%), Gaps = 67/375 (17%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDF 71
K+ P GL N GN C+LN+ LQ L P L+ +
Sbjct: 19 KNRPPLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSL-----------------C 61
Query: 72 DTPSGGSSKKKN-ISVLD--IGRPFS-------PSMFEAVLKNFTPDVPNSISGRPRQED 121
D+ S G K++ +L+ I R S P+ ++ LK F +QED
Sbjct: 62 DSVSNGERKRECPFCILEKRIVRSLSLDLTLDAPAKIQSCLKIFAEHFKGG-----QQED 116
Query: 122 AQEFLSFIMDQMHDELLKLQG-ESTSINGANTALVSLAEEDEWETVGPKN-KSAVTRTQS 179
A EFL +++D H+ L+L IN N KN + T + S
Sbjct: 117 AHEFLRYVIDACHNTCLRLMKLRRKGINSNN-----------------KNYDNDTTTSTS 159
Query: 180 FLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
S + +IFGG L+S VK + S V + + LD+ +++ +A++ F PE
Sbjct: 160 TSTSVVKEIFGGTLQSQVKCLSCHSESNKVDEIMDISLDVLHS--NSLREAMQKFFQPEI 217
Query: 239 LEG---YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS--YGSQGSTKLHKSVRFPL 293
L+G YR S +V A+K + I IL++ L RF +G K+ K++ F
Sbjct: 218 LDGNNKYRCESCKK--LVAARKQMSILQAPNILVIQLKRFEGIFGG----KIDKAIAFEE 271
Query: 294 QLVLGRDLLVTPSAEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAI 352
LVL + S + R +Y L T+ H G P GHY A + +W +D+ VT
Sbjct: 272 VLVLS-SFMCKGSQDPRPEYNLFGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLS 330
Query: 353 GTSKVLHDQAYVLFY 367
VL ++ Y+LF+
Sbjct: 331 TMQDVLSEKVYILFF 345
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 150/388 (38%), Gaps = 87/388 (22%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFV 68
K+V ++ GL N GN CFLN+ +Q P V+ L L + P G+ F
Sbjct: 146 KAVPLMIGAGLANLGNTCFLNSIMQCFTHTVPLVEGL--LLSCHSPNDGHNGFCVICAF- 202
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSF 128
+ S+ GR SP +F LK F+ D R +QEDA EF+
Sbjct: 203 ----------RYQMKQSLESTGRVISPVVFVDNLKQFSSDF-----RRHQQEDAHEFMQC 247
Query: 129 IMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+D++ S EED + +
Sbjct: 248 ALDKLE------------------TCFSNFEED---------------------NIAKKV 268
Query: 189 FGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSST 247
FGG L S ++ +++S T + + L L+I E V +I AL F+ EN++
Sbjct: 269 FGGSLVSKLRCCNCSRSSITNEQLIDLSLEI--ENVDSISSALESFTMVENIDAKLKCEG 326
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRF-SYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
N V K+ + QT S I HL RF + G+ K+ K + FPL+L L ++ S
Sbjct: 327 CNEEVSVEKQLMLDQTPS-IAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPYTILNES 385
Query: 307 AEGR-KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDA------------------ 347
KY+L A V H+G GHY R D W DD+
Sbjct: 386 DNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVASAILVPLGRDLIVLQ 445
Query: 348 ------SVTAIGTSKVLHDQAYVLFYKQ 369
VT + VL +AY+LFY +
Sbjct: 446 ITCLMIKVTKVSEGTVLSQEAYILFYAR 473
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 138/353 (39%), Gaps = 55/353 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQL-LQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL+N GN C+LN+ LQ L P L E +D K G+ L + +G
Sbjct: 106 GLVNLGNTCYLNSVLQCLCYTPPLANYALAEQHKKDCRKIGFCVLCELQSLMVRCLKSNG 165
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
S K P LKN + RQEDA EFL +++D +
Sbjct: 166 SSVK--------------PWPIVNKLKNIASHIQFG-----RQEDAHEFLRYLVDGIQSS 206
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L PKN ++ + + IFGG L+S+
Sbjct: 207 CL--------------------------AAYPKNLDQYSKDTTMI----YRIFGGYLRSL 236
Query: 197 VK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
V+ AQ S P L L LDI ++T+ LR F PE L G + V V
Sbjct: 237 VQCAQCKYKSIKYDPMLDLSLDIAD--LNTLSAMLRKFIEPEILSGRDMYTCSKCKVKVK 294
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I +L + + RF+ S K + ++F L L R + + + Y L
Sbjct: 295 AMKKFTIHRAPVVLTIPIKRFNKFSLFGGKNSRKIKFTETLDL-RPYMTSKTGSPLLYNL 353
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+ H G + GHY + N+QW +D+ VT + VL +AY+LFY
Sbjct: 354 YGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKSNINAVLLQEAYILFY 406
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 146/356 (41%), Gaps = 58/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+T+Q L P LL + TR+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANSG 182
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K + + D+ + + ++F QEDA EFL +I+D M
Sbjct: 183 NAIKPVSF-IRDLKK---------IARHFRFG---------NQEDAHEFLRYIIDAMQKA 223
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L NG L + + T+ + IFGG L+S
Sbjct: 224 CL---------NG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I S +L L L RF+ S G K+ K V +P L + R + + + Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSNGDPVMYGL 367
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
>gi|444318954|ref|XP_004180134.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
gi|387513176|emb|CCH60615.1| hypothetical protein TBLA_0D01070 [Tetrapisispora blattae CBS 6284]
Length = 483
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 158/374 (42%), Gaps = 56/374 (14%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
+GL+N G+ C++++ LQ LM FV L + + K P + G
Sbjct: 137 KGLVNMGSTCYMSSILQCLMHNPLFVDLSMKGVHYNYCKIQDPMKCMSCAIDNIISETYG 196
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
N ++DI N + V +++G Q+DA EFL FI++QMH++
Sbjct: 197 NKKTTPNEGLVDI-------------LNCSWRVNKNLAGYT-QQDAHEFLQFILNQMHND 242
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS----FLPSAL-SDIFGG 191
L + + ++ E G K+ V S L + L IF G
Sbjct: 243 Y---------------KLNEIHDTNKQEMNGTDFKTMVNGNSSKEHLHLCNCLPHTIFQG 287
Query: 192 QLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
LKS++ KA + T+ P++ L LD+ ++ T+ + L F E L + +
Sbjct: 288 FLKSIISCSECKAQSQTTIDPYMDLSLDVKGKS--TLYECLESFHRTERLHDFTYNCKKC 345
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTP--- 305
A + + I L+ I+++ L RF + GS+ K++ V FPL L + + P
Sbjct: 346 NKSQDANRQLSILKLAPIMVIQLKRFEHLITGSSVKINDFVEFPLHLNM-KSFCTAPTPD 404
Query: 306 ------------SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 353
S YEL VTH G ++GHY + + W F+D+ V +
Sbjct: 405 TDPTNLNEKTNKSTPDMIYELTGIVTHRGT-VNEGHYITYTKTADGVWYQFNDSVVMKVP 463
Query: 354 TSKVLHDQAYVLFY 367
++L +QAY+L Y
Sbjct: 464 LEQMLKEQAYLLIY 477
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 160/383 (41%), Gaps = 51/383 (13%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 63
K++ D P G N GN C+ N+ LQAL C+PF + L E + A LT
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
S SS+KK V+ +P F LK N + +DA
Sbjct: 70 LADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL+++++++ + L K + + N +++ +A + +K + +
Sbjct: 113 EFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIV-------T 165
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 WVHKIFKGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAE 223
Query: 243 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 299
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 283
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 358
+ E Y L A V H G P+ GHY + + N WL FDD SV I S V
Sbjct: 284 TVDEYVDIE---YSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDESVEIIEKSAVQT 339
Query: 359 -----------HDQAYVLFYKQV 370
D Y+L Y+ +
Sbjct: 340 FFGSSQEYSSNTDHGYILLYESL 362
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 152/360 (42%), Gaps = 56/360 (15%)
Query: 16 PRGLINSGNLCFLNATLQALMSCSP---FVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
P GL N GN C+LN+ LQ L P F LQ D + P
Sbjct: 23 PLGLRNLGNSCYLNSVLQCLTYTPPLANFCLRLQHSSLCDSSASSCPFCIL--------- 73
Query: 73 TPSGGSSKKKNISVLDIGRPF-SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+K+ L + + +PS ++ ++ F N GR QEDA EFL +++D
Sbjct: 74 -------EKQIARSLRLDLTYDAPSKIQSCIRIFAE---NFRCGR--QEDAHEFLRYVID 121
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
H+ L+L+ AN + + + +IFGG
Sbjct: 122 ACHNTCLRLKKLRRKGAEANGG---------------------GGGDTGGGTVVKEIFGG 160
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S VK S V + + LD++ ++++D+++ F PE L+G Y+ S
Sbjct: 161 ALQSQVKCLCCGYESNKVDEIMDISLDVFHS--NSLKDSMQKFFQPEVLDGNNKYKCDSC 218
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+V AKK + I IL++ L RF G G K+ K+V F LVL +
Sbjct: 219 KK--LVAAKKQMSILQAPNILVIQLKRFE-GILGG-KIDKAVAFEEVLVLSSFMCKASQD 274
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+Y+L T+ H G P GHY A + +W DD+ VT +VL ++ Y+LF+
Sbjct: 275 PQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKVYILFF 334
>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 169/380 (44%), Gaps = 58/380 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + E + ++ K TL + + D
Sbjct: 25 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--KRTKETLLSCLA-----DLFYSI 77
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + + +P F A L+ + N + Q+DA EFL+F+++ +++ +
Sbjct: 78 ATQKKKVGSI------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINEII 126
Query: 138 LKLQGES----------TSING-ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALS 186
L + ++ TS NG TA SL G ++ + Q P+ +
Sbjct: 127 LAERNQAKGGTAAGGTTTSKNGHVGTATPSLNHLLNGCGTG---ENGTQQPQE--PTWVH 181
Query: 187 DIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTS 245
+IF G L S + S+ + F L +D+ +I LR FS E L
Sbjct: 182 EIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKF 239
Query: 246 STGN-AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRD 300
N A+K ++++ L IL LHL RF Y Q + K+ V FPL+L L D
Sbjct: 240 KCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSD 299
Query: 301 LLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH- 359
V P R Y+L+A V H G P++GHY + + + WL FDD V I S +
Sbjct: 300 DAVNPD---RLYDLMAVVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIEASTIEDF 355
Query: 360 -----------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 356 YGLTSDIQKSSETGYILFYQ 375
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 151/364 (41%), Gaps = 66/364 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++N+T+Q QL GY + DF
Sbjct: 810 GLRNLGNTCYMNSTIQE-------SQL------------GY-----YGEIADDFSV---- 841
Query: 78 SSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
I L G + +P F+ V+ PD + Q+D+ +FL+F+MD +H+
Sbjct: 842 -----IIRALWSGQYKCITPRDFKYVVGKHNPDFAGTT-----QQDSHDFLTFLMDGLHE 891
Query: 136 ELLKLQGESTSINGANTAL-VSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L +++ N + S A E W+ N+S + ++F GQLK
Sbjct: 892 GLNRVKKRPEIPEQDNDKMGDSQAAELAWKHHQLCNESIIV-----------ELFQGQLK 940
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV- 252
S + K S Q F+ L L I + ++ + L+LF E L G V
Sbjct: 941 STLMCLHCQKMSVNFQAFMFLTLPIPPSSRCSLGECLKLFLKEERLTGSSRWRCPRCKVD 1000
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK- 311
A K + I L +IL++ L RF Y Q K++ V FP R+L + P EG K
Sbjct: 1001 RDAVKKIDIWRLPRILLIGLNRFVYKGQWREKINSFVDFPT-----RNLDLNPYLEGPKS 1055
Query: 312 ----YELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L AT H G GHYTA R ++W +DD V+ + S V AYVL+
Sbjct: 1056 IKSSYRLYATSNHSG-TLDGGHYTAYCRNPCTEKWFKYDDDHVSEMKESDVRSSLAYVLY 1114
Query: 367 YKQV 370
Y V
Sbjct: 1115 YTSV 1118
>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 156/369 (42%), Gaps = 45/369 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C+ N+ LQAL C PF + L E ++ G P F +
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYAKN-KNLGDPEENLLTCLADLF---TQI 79
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
SS+KK V+ +P F ++ N + +DA EFL+++++++ D L
Sbjct: 80 SSQKKKTGVI------APKRFVQRVRK-----QNELFRSYMHQDAHEFLNYLLNELVDIL 128
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
K + ++ + A GP+N + L + + F G L +
Sbjct: 129 EKESHVAKTLPDESLPSGQTAN-------GPRNAPTNGVQREPLVTWVHKNFQGLLTNET 181
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVTA 255
+ + +A + FL L LDI E +I L+ FS+ E L + + A
Sbjct: 182 RCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 239
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
+K +KI+ IL++HL RF Y Q KL V FPL+L L + S +Y
Sbjct: 240 QKRMKIKKPPHILVIHLKRFKYMEQLGRHKKLSYRVVFPLELKLANSMEDVDS----EYT 295
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL------------HDQ 361
L A V H G P+ GHY + + N WL FDD +V I S V D
Sbjct: 296 LFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSAQEYSSNTDH 354
Query: 362 AYVLFYKQV 370
Y+LFY+ +
Sbjct: 355 GYILFYESL 363
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 149/357 (41%), Gaps = 65/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKA--GYPTLTAFVGFVSDFDTPS 75
GL N GN CFLN+ LQ L+ P + + RD P G+ +F D
Sbjct: 109 GLYNQGNTCFLNSALQCLLHTPPLLHAVLN-HPRDCPAQDDGFCITCSFRRVAQD----- 162
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
S K K G FSPS +L N + S+ R RQEDA EFL F++D M
Sbjct: 163 --SFKVK-------GNAFSPS---PILHNLH-KIAKSLR-RGRQEDAHEFLRFLIDAMQK 208
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L G+ ++ A E W +S +FGG+L+S
Sbjct: 209 ACL--HGQPKKVDPA-------VAEATW---------------------VSRVFGGKLRS 238
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
V+ N S T L L LDI + + ++ AL+ F A ++L G Y+
Sbjct: 239 RVRCCSCNHPSDTFDSILDLSLDIQNAS--SVHQALKHFVAIDHLRGADKYKCEKCKKP- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
V A+K I + L +HL RF+ +G KL V++ L L + +
Sbjct: 296 -VNAEKQFTIDSAPLALTVHLKRFTPFG----RKLAHVVQYKEHLSLAGAMSKDAKEQSP 350
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+Y+L + H G P+ GHY A + N +W +D +V+ + AY+LFY
Sbjct: 351 QYKLYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLDLKSAYMLFY 407
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 146/356 (41%), Gaps = 58/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+T+Q L P LL + TR+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTIQCLTYTPPLANYLLSKEHTRNCHQGGFCMLCVMQNHMIQAFANSG 182
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K + + D+ + + ++F QEDA EFL +I+D M
Sbjct: 183 NAIKPVSF-IRDLKK---------IARHFRFG---------NQEDAHEFLRYIIDAMQKA 223
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L NG L + + T+ + IFGG L+S
Sbjct: 224 CL---------NG----YTKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKKKVP 310
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I S +L L L RF+ S G K+ K V +P L + R + + + Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSNGDPIMYGL 367
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 423
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 138/358 (38%), Gaps = 74/358 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 40 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 93
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 94 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 134
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 135 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 163
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 164 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 221
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 222 ATKRLTLHSTSQVLVLVLKRFTLVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 273
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY
Sbjct: 274 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 331
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 160/383 (41%), Gaps = 51/383 (13%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 63
K++ D P G N GN C+ N+ LQAL C+PF + L E + A LT
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
S SS+KK V+ +P F LK N + +DA
Sbjct: 70 LADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL+++++++ + L K + + N +++ +A + +K + +
Sbjct: 113 EFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIV-------T 165
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 WVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAE 223
Query: 243 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 299
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 283
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 358
+ E Y L A V H G P+ GHY + + N WL FDD SV I S V
Sbjct: 284 TVDEYVDIE---YSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDESVEIIEESAVQT 339
Query: 359 -----------HDQAYVLFYKQV 370
D Y+L Y+ +
Sbjct: 340 FFGSSQEYSSNTDHGYILLYESL 362
>gi|194034732|ref|XP_001927691.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Sus scrofa]
Length = 373
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 148/355 (41%), Gaps = 45/355 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 45 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDM----- 99
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L N P + + Q+DAQEFL ++++++H+
Sbjct: 100 ---------WLGDSECVSPEIFRSALGNLYPAL-----MKKTQQDAQEFLIYVLNELHEA 145
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
L K + N + P+ + ++S S ++ +F GQL S
Sbjct: 146 LKKYHRRRSYENRS----------------IPRCCRKMIASES---SIITRLFEGQLSYS 186
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRT--SSTGNAGVV 253
++ + + + F +L L I SE +++D L+ F + L S
Sbjct: 187 IICLKCENCTYKNEVFTVLPLPIPSEYECSLQDCLQCFFQQDTLTWNNQIHCSFCETKQE 246
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
TA ++ I KI++ HL RF KL + +PL + + + KY
Sbjct: 247 TAVRA-SISKAPKIIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYICPIFRKHPKYN 305
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 306 LCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 359
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 163/377 (43%), Gaps = 68/377 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CF+NA LQ+L + + F ++L P + G + +
Sbjct: 146 GLRNLGNTCFMNAVLQSLSNINQFCGYFKDL----------PAVELRSGKTAGKRIYNTR 195
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR--PR-----QEDAQEFLSFIM 130
+ K ++S+++ R ++++ +PD ++ + PR Q+DA EF+ +++
Sbjct: 196 NMKHDDVSLVEEIRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEFMRYLL 255
Query: 131 DQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFG 190
D++H E LQG + W T PK ++ T +S IFG
Sbjct: 256 DRLHTE---LQGST------------------WPTT-PKKQTNGHAT------IVSVIFG 287
Query: 191 GQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE-----------AVHTIEDALRLFSAPEN 238
G L S V + + PFL + LDI V ++D ++ F A E
Sbjct: 288 GLLLSEVTCRPCGSLYKKIDPFLDVSLDIPERFRPRSKNKDGSQVCRLQDCMQSFIAVEE 347
Query: 239 LEGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL 295
LE T + S K ++ + +L +HL RF++ TK+ V+FP++
Sbjct: 348 LE--ETEQYMCPKCQQRQPSTKKFWLKAIPNVLCIHLKRFTWSGFLRTKIDTYVQFPMKG 405
Query: 296 VLGRDLLVTPSAEGRK-----YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVT 350
+ + ++ P + Y+L A + H G GHY A A N QW F+D++VT
Sbjct: 406 LDIQPFMLGPECQDENVSTTVYDLAAVIVHQGSGAGAGHYIAFA-VNNGQWYCFNDSTVT 464
Query: 351 AIGTSKVLHDQAYVLFY 367
+ + +AY+LFY
Sbjct: 465 PVEEKVITRCKAYILFY 481
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 162/371 (43%), Gaps = 64/371 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 85 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRKKESLLTCLS------DLFNSI 136
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 137 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 184
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG +EE + K+ +T + +IF G L +
Sbjct: 185 LQEEKKQEKQNGKLQNGSIESEEGD--------KTDLT--------WVHEIFQGTLTNET 228
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 229 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 286
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 287 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 341
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 342 RMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 400
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 401 NSESGYILFYQ 411
>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
Length = 360
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 162/375 (43%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 30 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 81
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 82 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 129
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK+ +T + +IF G L +
Sbjct: 130 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKAELT--------WVHEIFQGTLTN 172
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 173 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 230
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 231 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 283
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 284 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 342
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 343 DISKNSESGYILFYQ 357
>gi|159488883|ref|XP_001702430.1| predicted protein [Chlamydomonas reinhardtii]
gi|158271098|gb|EDO96925.1| predicted protein [Chlamydomonas reinhardtii]
Length = 347
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 161/384 (41%), Gaps = 72/384 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVG--FVSDFDTPS 75
GL N GN CF+N++LQ L P +Q AF+G ++ D + +
Sbjct: 4 GLSNLGNTCFMNSSLQCLAHAVPLMQ-------------------AFLGGTYIKDLNRTN 44
Query: 76 -----GGSSKKKNISVLDIGR----PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFL 126
G ++ + + + R SP F+A + F P SG Q D+QEFL
Sbjct: 45 PLGMKGELAEAFGMLLQQLWRGGVSSVSPRSFKAKIGRFAP----QFSGYA-QHDSQEFL 99
Query: 127 SFIMDQMHDEL--LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA 184
+F++D +H++ +K + + + LA E W +N S V
Sbjct: 100 AFLLDGLHEDTNRIKTKPYFETKDEPGRPDEELATE-AWSQYRARNNSLVV--------- 149
Query: 185 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTI--EDALRLFSAPENLEG 241
D F G LKS + + S PF+ L L + + ED +R+F PE L+
Sbjct: 150 --DHFQGLLKSGLDCPKCAYHSVKFDPFMYLSLPLPESRRRPVALEDCMRVFLQPERLDE 207
Query: 242 YRTSSTGNAGV-VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGR 299
V A K + + +L ++L++HL RFSY KL V FPL L LG
Sbjct: 208 SDAWYCPRCKEHVCADKKLDLWSLPEVLVVHLKRFSYTRYSRNKLDTRVDFPLHGLDLGS 267
Query: 300 DLLVTPSAEGRK--YELVATVTHHGRDPSKGHYTADARYFN------------DQWLHFD 345
+L A+G Y+ A H G GHYTA A+ + W FD
Sbjct: 268 YVL---RAQGVAPLYDCFAVSNHFG-SMGGGHYTAYAKLPGPPPGTAAGADGAEAWYCFD 323
Query: 346 DASVTAIGTSKVLHDQAYVLFYKQ 369
D+ V+A+ V AYVLFY++
Sbjct: 324 DSHVSAVEPEAVRSSAAYVLFYRR 347
>gi|125852016|ref|XP_692003.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Danio
rerio]
Length = 404
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/369 (30%), Positives = 157/369 (42%), Gaps = 54/369 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN CFLNA +Q L TR + Y + A+V P
Sbjct: 63 GLRNVGNTCFLNAIVQCLS------------HTRSL--RDYCLMRAYVQDKHSNQEPVLM 108
Query: 78 SSKKKNISVL---DIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K ++ L D G +P F V K P SG Q+DAQEFL F++D++
Sbjct: 109 DEFSKVLAGLWECDAGETTVNPGKFYRVFKESVP----YFSGYS-QQDAQEFLRFLLDRL 163
Query: 134 HDELLKLQGESTS-INGANTALVSLAEEDE----WETVGPKNKSAVTRTQSFLPSALSDI 188
H E+ + + + I A +E W+ ++ S + D+
Sbjct: 164 HTEINRRPSKRPAVIERKEPAYTRFRISEEAFAMWQRHLDRDDSKIV-----------DL 212
Query: 189 FGGQLKSVVKAQ-GNKASATVQPFLLLHLDI-----YSEAVHTIEDALRLFSAPENLEGY 242
F GQL+S + + S T F L L I Y AV T+ + L LFS E L+
Sbjct: 213 FSGQLRSSLHCSVCSHYSNTFDVFCDLSLPIPKKSDYGRAV-TLRECLDLFSQEEKLDKE 271
Query: 243 RTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQ-LVLGRD 300
+ T + K + IQ ++L++HL RF+ +K V FPL L LG
Sbjct: 272 NSPMCERCNRRTESTKRLTIQRFPRVLVIHLNRFAMSRFSISKSTVPVSFPLTALDLG-- 329
Query: 301 LLVTPSAEGRK-YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
L P G Y+L A H G + GHYTA R + W ++D+ V AI K+
Sbjct: 330 -LFGPVDCGPVLYDLYAVCNHSG-TVNMGHYTAACRE-EEGWCFYNDSCVDAISEEKLQS 386
Query: 360 DQAYVLFYK 368
+QAYVLFY+
Sbjct: 387 NQAYVLFYE 395
>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
Length = 347
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 161/373 (43%), Gaps = 74/373 (19%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFRENVLSYKAQQKKKENLLTCLA--------DLFHSI 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 76 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-- 122
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
++ ++ + N ++ AEE+ NK +T + +IF G L +
Sbjct: 123 --MEKQNGKLKNGN---MNEAEEN--------NKQELT--------WVHEIFQGTLTNET 161
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 162 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 217
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 218 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAVN 272
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 273 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 331
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 332 SKNSESGYILFYQ 344
>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
Length = 359
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLSHSI 80
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 282
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 283 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 341
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 342 DISQNSESGYILFYQ 356
>gi|291290972|ref|NP_001073699.2| ubiquitin specific peptidase 50 [Bos taurus]
Length = 378
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 154/361 (42%), Gaps = 57/361 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 50 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDCSEVATAFAYVMTDM----- 104
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L N P + + Q+DAQEFL ++++++H+
Sbjct: 105 ---------WLGDSDCVSPEIFRSALGNLYP-----VFMKKTQQDAQEFLIYVLNELHEA 150
Query: 137 LLKLQG----ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
L K E SI +++ N+S++ ++ +F GQ
Sbjct: 151 LKKYHRRKAYEKRSIPRCCRKMIA-------------NESSI----------ITRLFEGQ 187
Query: 193 LK-SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAG 251
L S+V + + + F ++ L I SE +++D L+ F + L ++ +
Sbjct: 188 LSYSIVCLKCENCTYKNEVFTIISLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCS 244
Query: 252 VVTAKKSVKIQ-TLSKI---LILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K+ ++ T+SK+ ++ HL RF KL + +PL + +
Sbjct: 245 FCETKQEAAVRATISKVPKTIVFHLKRFDILGTMKRKLRTDIHYPLTNLDLTPYICPIFR 304
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLF 366
+ KY L A V H G D GHYTA ++ Q W FDD V+ I + V AY+LF
Sbjct: 305 KHPKYNLCAVVNHFG-DLDGGHYTAFSKNSVTQAWYSFDDTRVSEIPDTAVQTAAAYLLF 363
Query: 367 Y 367
Y
Sbjct: 364 Y 364
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 157/371 (42%), Gaps = 61/371 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + P+ LT D +
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKVQ--PRRKESLLTCLA------DLFNSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-- 138
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
LQ E + N L E E ++ V +IF G L +
Sbjct: 139 -LLQEEKSQERQQNGKLGGGGGGGEGEGGKETQQTWV-----------HEIFQGTLTNET 186
Query: 198 KAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ +A S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 187 RCLNCEAVSSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEA 244
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG---- 309
+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 245 QKRMRVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLEL-----RLFNTSGDATNPD 299
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH---------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 300 RLYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDISK 358
Query: 360 --DQAYVLFYK 368
+ Y+LFY+
Sbjct: 359 NSESGYILFYQ 369
>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Otolemur garnettii]
Length = 366
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNETAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
caballus]
Length = 360
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 30 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 81
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 82 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 129
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 130 LQEEKKQEKQNGKLKNGNMNETAE---------NNKPELT--------WVHEIFQGTLTN 172
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 173 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 230
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 231 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 283
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 284 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 342
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 343 DISKNSESGYILFYQ 357
>gi|392580119|gb|EIW73246.1| hypothetical protein TREMEDRAFT_22812, partial [Tremella
mesenterica DSM 1558]
Length = 323
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 151/359 (42%), Gaps = 64/359 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N C+ NATLQ L PF+++ +++ G+ L A + D G
Sbjct: 18 GLYNPSQACYANATLQVLFHTPPFLRIASAHQSQSCENKGWCMLCA-LRTTGDEHWSRQG 76
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S K + + + K F + +QEDA EF F+ D +
Sbjct: 77 SYMPKEVH----------NHLSQIHKGFN---------KHKQEDAHEFFRFVTDAL---- 113
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 196
++T++ G PK+ A + +++ ++GGQ++S V
Sbjct: 114 -----QATALAGR-----------------PKDLPAKIKNSTWV----YKLWGGQVRSRV 147
Query: 197 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VTA 255
+ + + S T FL L LD+ ++ LR F + LEG + N A
Sbjct: 148 ICDRCSTPSDTFDTFLDLSLDVPPNRKPSVLSMLREFCKDDKLEGENKYNCENCKRKADA 207
Query: 256 KKSVKIQTLSKILILHLMRF-----SYGSQGSTKLHKS-VRFPLQLVLGRDLLVTPSAEG 309
KKS +I +L LHL RF S+G++ + + + + F L + + +EG
Sbjct: 208 KKSFRISHAPPVLTLHLKRFNVRYNSFGNKANAEKYSGFIEFGEWLDIANFM-----SEG 262
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHD-QAYVLFY 367
KY L H G + GHYT+ R + QW H DD ++A+ +VL D QAY+L Y
Sbjct: 263 TKYRLFGVTCHRGAELRFGHYTSYVRGPSGQWYHADDEDMSAVRQDEVLRDKQAYLLSY 321
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 145/356 (40%), Gaps = 65/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++NATLQ L T P A Y L+ G T
Sbjct: 81 GLQNMGNTCYVNATLQCL--------------TYTEPLASY-MLSQQHGTTCRRQTSCML 125
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+ + +++ + +L F R +QEDA E+L FI+D M
Sbjct: 126 CTLQAHLTRVLCHPGRVLRPLPLLLAAFH---------RHKQEDAHEYLMFILDAMQQ-- 174
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L E+ + P++ + + + +FGG +S +
Sbjct: 175 -----------------ACLPEDKLSDPECPQDSTLIQQ-----------LFGGYWRSQI 206
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGVV 253
+ S+T++P+L + LDI A H+I AL PE LEG Y S V
Sbjct: 207 QCLHCQGISSTLEPYLDISLDI--GAAHSISQALEQLMKPELLEGENAYHCSKCLEK--V 262
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K + + T K+LIL L RFS K+ K V++P +L + + L A Y
Sbjct: 263 PASKVLTLHTSPKVLILVLRRFS--DLTGNKMTKEVQYPERLDM-QHYLSEQRAGPLVYV 319
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H GR GHY + N QW DDA V+A + L AYVLFY Q
Sbjct: 320 LYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFYMQ 375
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 142/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKCCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHRPGHVIQPS--QALAAGFH---------RGKQEDAHEFLMFTVDAMRKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + V P +K + + IFGG +S
Sbjct: 176 CLPGHKQ----------------------VDPHSKDT---------TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCQGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQKAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS KL K+V++P L + + + + Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA G + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQ 374
>gi|328708865|ref|XP_003243820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Acyrthosiphon pisum]
Length = 792
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 157/360 (43%), Gaps = 49/360 (13%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
RGL N GN C++N+ LQ L S T D+ K + F + S G
Sbjct: 473 RGLQNLGNTCYMNSILQCLSS------------TEDLVKYFINIYSNFTNYKS---RTKG 517
Query: 77 GSSKKKNISVLDI----GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+K+ + + ++ GR F F+ + + + Q+D+ EFL+ ++D
Sbjct: 518 LVAKEFSNVIKNLWSQSGRGFQSQQFKDTIGEYK-----DMFKHYDQQDSHEFLTILLDW 572
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
+HD+L + + ++ I GA+ E++W N S + + +F GQ
Sbjct: 573 LHDDLNQPE-DNRVILGASKE----TGEEDWGNWTKANNSIIQQ-----------LFYGQ 616
Query: 193 LKSVVKAQGN-KASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNA 250
KS V + S T +PFL L L + SE T+ D L+L+ E++ G+
Sbjct: 617 QKSTVSCDTCFEKSVTFEPFLSLSLPLPSEGNKCTLSDCLQLYLNGESICGWHCPKCKRN 676
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
T K + I L LI+HL RFS S G K + +V FP + + +
Sbjct: 677 RDATKK--LDIMRLPPYLIIHLKRFS--SNGYKK-NSNVEFPKMNLDMSNFINGLEHRNW 731
Query: 311 KYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
KY L H G GHYTA + ++W FDD V I +S + +AY+LFY++
Sbjct: 732 KYYLYGVSNHSGS-LDGGHYTASCFKNSINKWYKFDDVRVYEIDSSTICSPEAYILFYRR 790
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 149/367 (40%), Gaps = 69/367 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGF--VSDFDTPS 75
GL N GN CFLN+ LQ C L R K Y T +F + + +
Sbjct: 3 GLANLGNTCFLNSVLQ----CLTHTPALANFALRGEHKK-YKTGGSFNALYEIGEHVARA 57
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
SS GR +P+ A++KN GR QEDA E ++D MH
Sbjct: 58 LNSS----------GRTIAPT---ALVKNLRALSKTFRKGR--QEDAHELARCLLDAMHK 102
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ + E V PK R ++ S + +FGG+L+S
Sbjct: 103 KCV-------------------------EVVKPKISPNSARAET---SFVWKVFGGRLRS 134
Query: 196 VVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRT---SSTG 248
V + + S T PFL L L++ ++ A ++F+ E L+G YR S+
Sbjct: 135 QVNCKTCGRNSETFDPFLDLSLEV--GRAKSVLGAFKMFTHTEVLDGDNKYRCEGKSANS 192
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ + A K + +L L L RF+Y G KL+ V +PL+L D+ S E
Sbjct: 193 KSHLTKASKQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYPLEL----DITPYTSDE 248
Query: 309 GRK------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQA 362
G Y+L + H G + GHY + W DD +T++ VL QA
Sbjct: 249 GLTSRGKAVYDLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEITSVSEKVVLKQQA 308
Query: 363 YVLFYKQ 369
Y+LFY +
Sbjct: 309 YLLFYAR 315
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 142/356 (39%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++NA+LQ L P +L + ++ + L ++ P
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHKCCMLCTMEAHITRALHCP- 139
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G PS +A+ F R +QEDA EFL FI+D M
Sbjct: 140 --------------GHVIQPS--QALAAGFH---------RGKQEDAHEFLMFIVDAMKK 174
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L + A+ D +T + + IFGG +S
Sbjct: 175 ACLPGHKQ--------------ADHDSEDT-----------------TLIHQIFGGCWRS 203
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVV 253
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 204 QIKCLHCQGVSDTFDPYLDIALDI--QAAQSVKQALEQVVKPEELNGENAYHCGLCLQKA 261
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K+ + T +K+LIL L RFS KL K+V++P L + + + + Y
Sbjct: 262 PASKTFTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDI-QPYMSQQNTGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQ 374
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 138/358 (38%), Gaps = 74/358 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 28 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 81
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 82 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 122
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 123 CLSASQPSGH-----------ASEDT--------------------TIIRQIFGGTWRSQ 151
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 152 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 209
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 210 ATKRLALHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 261
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY
Sbjct: 262 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 319
>gi|356525471|ref|XP_003531348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 2
[Glycine max]
Length = 383
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 162/399 (40%), Gaps = 68/399 (17%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQ--------------ALMSCSPFVQLLQEL- 48
K++ D P G L N GN C+ N+ LQ AL C PF + L E
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNSVLQGALLTSFSFCHLVQALYFCVPFREQLLEYY 69
Query: 49 -RTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTP 107
+ I LT S SS+KK V+ +P F LK
Sbjct: 70 GNNKSILDGEENLLTCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK--- 114
Query: 108 DVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVG 167
N + +DA EFL+F+++++ D +L+ + ++ + + E G
Sbjct: 115 --QNELFRSYMHQDAHEFLNFLLNELVD-ILEKEAQAAKTDQETSP------PSEKAVNG 165
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTI 226
PKN A + L + + F G L + + Q +A + FL L LDI E +I
Sbjct: 166 PKNGQANGVHKEPLVTWVHKNFQGILTNETRCLQCETVTARDETFLDLSLDI--EQNSSI 223
Query: 227 EDALRLFSAPENLEGY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GST 283
L+ FS+ E L + + A+K +KI+ IL++HL RF Y Q
Sbjct: 224 TSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYK 283
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLH 343
KL V FPL+L L T +Y L A V H G P+ GHY + + N WL
Sbjct: 284 KLSYRVVFPLELKLSN----TVEDADIEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLF 338
Query: 344 FDDASVTAIGTSKVL------------HDQAYVLFYKQV 370
FDD +V I S V D Y+LFY+ +
Sbjct: 339 FDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESI 377
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 75
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 142
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P + + F + RQEDA EFL F +D
Sbjct: 143 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 172
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+LK G +G VGP+ + ++ I GG +S
Sbjct: 173 -VLKAVGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 205
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 206 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCLQKT 263
Query: 255 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 264 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 320
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + N W DDA VTA T+ VL+ AYVLFY
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGNGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
Length = 440
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 165/377 (43%), Gaps = 52/377 (13%)
Query: 2 KAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPT 60
+ I+ P + +D L G +N G+ CF+++ LQ L+ +PF VQ K P
Sbjct: 107 RNISFPTVTNRDGL-HGFVNMGSTCFMSSILQVLIH-NPFIVQNSMSQSHYSSCKIRNPN 164
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSM--FEAVLKNFTPDVPNSISGRPR 118
G K N G+P + F ++L N + + ++ +G
Sbjct: 165 NCISCALDEIIAESYGNFVKYNN------GKPINQYHDGFISML-NCSWKINDNFAGYS- 216
Query: 119 QEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQ 178
Q+DA EFL FI++++H + KL T+ + + L+
Sbjct: 217 QQDAHEFLQFILNRLHRDY-KLTSTYTNNTDSCSCLIH---------------------- 253
Query: 179 SFLPSALSDIFGGQLKS-VVKAQGNKASATV-QPFLLLHLDIYSEAVHTIEDALRLFSAP 236
IF G+LKS +V + + S TV P++ L LDI +A T+ L F
Sbjct: 254 --------SIFQGKLKSSIVCPECHDNSKTVTDPYIDLSLDIKDKA--TLYQCLDSFHKK 303
Query: 237 ENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQL 295
E L Y + K + I L +L+L L RF + + G + KL+ + FP L
Sbjct: 304 ETLHDYNYHCPNCDTMQDPIKQLTIDKLPPVLVLQLKRFEHLNNGQNVKLNAFIEFPTYL 363
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
+ + + YEL ++H G ++GHY A + ++ W F+D+ VT+I
Sbjct: 364 NMKKYCHTEENNSSIIYELNGVISHIGT-VNEGHYIATLKLDSNNWFKFNDSMVTSISEE 422
Query: 356 KVLHDQAYVLFY--KQV 370
+VL DQAY+LFY KQV
Sbjct: 423 EVLKDQAYLLFYSIKQV 439
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 140/360 (38%), Gaps = 51/360 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDI-PKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+NA +Q L + R PK G +F +
Sbjct: 64 GLANLGNTCFMNAVMQCLTHTPALAAFCLDGEHRRFRPKGGNGGGGSFSAIYEMGEHVCR 123
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ ++ + SPS F L++ + RQEDA EF ++D MH++
Sbjct: 124 ALAGERRV--------VSPSAFVKNLRSISKTFRKG-----RQEDAHEFARCLLDAMHEK 170
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+ + PKN T F +FGG+L+S
Sbjct: 171 CV----------------------EHARPKPPKNSPRAETTFVF------QVFGGRLRSQ 202
Query: 197 VKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
V + + S T F+ L LDI ++E AL+ + A E L+G Y+ G
Sbjct: 203 VTCKTCGRKSDTFDSFMDLSLDI--AKAKSVEAALKRYVAVEVLDGSNKYKCEMGGGKPH 260
Query: 253 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL-VLGRDLLVTPSAEG- 309
+T A K I +L + L RF Y G KL + V +P L + G P A G
Sbjct: 261 MTRATKQFTIDAAPLVLTVQLKRFEYVPFGRGKLTQFVEYPTSLDITGAMSDANPKARGV 320
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
KY L A + H G GHY + W DD V+A L+ +AY+LFY +
Sbjct: 321 EKYSLFAVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVSATSERTALNQKAYLLFYAR 380
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 144/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 144/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|11993482|gb|AAG42759.1|AF302669_1 ubiquitin-specific protease 21 [Arabidopsis thaliana]
Length = 737
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 137/352 (38%), Gaps = 51/352 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL NSGN CF+ + LQ P + L+ + G +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S NI F L F+ D I+ QEDA EFL +D++
Sbjct: 224 SGYGINID-----------RFRDNLTYFSSDF--MIN---HQEDAHEFLQSFLDKL---- 263
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 196
E + PKN+ +Q + + ++FGG L S +
Sbjct: 264 ------------------------ERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTL 297
Query: 197 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 256
N S T +P L L+I E V+T+ AL F+ E LE T V T +
Sbjct: 298 CCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKE 354
Query: 257 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 315
K ++ L + HL RF+ K+ + FPL+L L + E +Y L
Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLY 414
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 415 AFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 211
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 211
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 212 ACL---------NGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|440799459|gb|ELR20504.1| ubiquitin specific protease 44 isoform 2, putative [Acanthamoeba
castellanii str. Neff]
Length = 549
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 135/300 (45%), Gaps = 68/300 (22%)
Query: 92 PFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGAN 151
PF+ + +A+ K F P N +Q+DAQEFL +++D++HDEL TS+NG
Sbjct: 107 PFA--LLDALWK-FVPRFRNY-----QQQDAQEFLVYLLDKLHDEL-------TSLNGGR 151
Query: 152 TALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV--KAQGNKASATVQ 209
+ S + G K + S +S F G+L S V A GN S+ +
Sbjct: 152 EVVASPS--------GQKRQGE---------SIISKTFNGELLSQVTCSACGN-VSSRRE 193
Query: 210 PFLLLHLDIYSEAV----------------HTIEDALRLFSAPENLEGYRTSSTGNAGVV 253
P+L L LDI + ++ D L F+ PE L GY +
Sbjct: 194 PYLDLLLDIPIQHAGGSRSTRGNRKTNVPSCSLYDCLDSFTWPEKLTGYYCEKCKSN--Q 251
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--LVTPSAEGRK 311
A K + IQTL RF + + K+ V FPL +G DL + E
Sbjct: 252 DASKRLAIQTLPD-------RFCWTTTSRAKVDTKVLFPL---IGLDLSAFCSEERENAI 301
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ--WLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
++L + V HHG PS GHYTA Y +Q WLHF+D V+ + QAY+LFY++
Sbjct: 302 FDLSSVVIHHGSGPSAGHYTAFC-YHTEQGTWLHFNDCRVSVSSPQEAASAQAYMLFYQR 360
>gi|335293447|ref|XP_003129021.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sus scrofa]
Length = 376
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 46 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 97
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 98 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 145
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 146 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 188
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 189 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 246
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 247 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 299
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 300 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 358
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 359 DISKNSESGYILFYQ 373
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 142/346 (41%), Gaps = 67/346 (19%)
Query: 15 LPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDT 73
+P GLIN GN C+ N LQ L S P LL + + G+ + V
Sbjct: 81 VPCGLINCGNSCYANVVLQCLASTRPLAAYLLHGMHQEACEREGWCFMCELEDHVQ---- 136
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
+ PFSP + L++ + NS+ G RQEDA EF+ +D M
Sbjct: 137 -----------KAFNNQMPFSPIKILSRLRS----IGNSL-GYGRQEDAHEFMRLAVDCM 180
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
L G T+++ RTQ + + IFGG L
Sbjct: 181 QKICLDEAGGETTLD--------------------------ARTQE--TTLIQHIFGGYL 212
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGN 249
+S VV Q + S + L L + I V ++EDAL+ F++PE L+G YR
Sbjct: 213 QSQVVCCQCQQRSNLYENMLDLSVGIQGN-VESLEDALKQFTSPEWLDGDNKYRCDRCN- 270
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL---LVTPS 306
V AKK + + IL + L RF G G K++K V FP +L + + + TP
Sbjct: 271 -AYVRAKKRLSVHEAPNILTIALKRFQGGKFG--KINKKVTFPEELDMVPYMSGTVDTPP 327
Query: 307 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVT 350
A YEL A V H + GHY R N W DD+ V+
Sbjct: 328 A----YELYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVS 369
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 142/358 (39%), Gaps = 68/358 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL---QELRTRDIPKAGYPTLTAFVGFVSDFDTP 74
GL N+GN CFLN+ LQ L+ P + +L ++ + K Y + D
Sbjct: 696 GLYNTGNTCFLNSALQCLLHTPPLLHVLIAHSKVDPCQVRKGAYCMACGLRSVMFD---- 751
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
S +K+ R FSPS + + + R RQED+ EFL + +D +
Sbjct: 752 ----SHQKH-------RQFSPSQITSNMHVIAKHM-----RRGRQEDSHEFLRYAIDALQ 795
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
L G L E W + IFGG+L+
Sbjct: 796 KACLA---------GYPPKLDPKLAETTW---------------------VHKIFGGRLR 825
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S V S T L L +DI + +++ALR F+A ++L+G Y+ A
Sbjct: 826 SRVTCLDCGHNSDTFDSVLDLSIDILGSS--GLKEALRKFTAVDHLKGADKYKCEKCKKA 883
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
VTA K + +L +HL RFS G + + R LQ V+ G
Sbjct: 884 --VTADKQFTVHDAPLVLTIHLKRFSPIGGKIGQPVKYDERLSLQSVMSS------GQHG 935
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A ++H G P+ GHY A + N QW +D SVT + AY+LFY
Sbjct: 936 PSYVLYAVISHAGGGPNSGHYYAHVKGSNGQWYEMNDDSVTRHPGAPTGMKNAYILFY 993
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 142/356 (39%), Gaps = 58/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+T+Q L P LL + R+ + G+ L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSQEHARNCHQGGFCMLCVMQNHIIQAFANSG 182
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L N A Q+ + + IFGG L+S
Sbjct: 224 CL-------------------------------NGCAKLDRQTQATTLVHQIFGGYLRSR 252
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSLCKSVSDTYDPYLDIALEIRQAA--NIVRALELFVKPDVLSGENAYLCAKCKKKVP 310
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFSIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVTYGL 367
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRI 423
>gi|18422708|ref|NP_568667.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
gi|75262521|sp|Q9FIQ1.1|UBP21_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 21; AltName:
Full=Deubiquitinating enzyme 21; Short=AtUBP21; AltName:
Full=Ubiquitin thioesterase 21; AltName:
Full=Ubiquitin-specific-processing protease 21
gi|9758510|dbj|BAB08918.1| unnamed protein product [Arabidopsis thaliana]
gi|332008037|gb|AED95420.1| ubiquitin carboxyl-terminal hydrolase 21 [Arabidopsis thaliana]
Length = 732
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 137/352 (38%), Gaps = 51/352 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL NSGN CF+ + LQ P + L+ + G +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S NI F L F+ D I+ QEDA EFL +D++
Sbjct: 224 SGYGINID-----------RFRDNLTYFSSDF--MIN---HQEDAHEFLQSFLDKL---- 263
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 196
E + PKN+ +Q + + ++FGG L S +
Sbjct: 264 ------------------------ERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTL 297
Query: 197 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 256
N S T +P L L+I E V+T+ AL F+ E LE T V T +
Sbjct: 298 CCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKE 354
Query: 257 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 315
K ++ L + HL RF+ K+ + FPL+L L + E +Y L
Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLY 414
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 415 AFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 155/365 (42%), Gaps = 62/365 (16%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 210 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 265
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFI 129
+S+ + PF+P KN +PN I G RQEDA EF+ F
Sbjct: 266 CHIQRASESMH--------PFAP-------KNILSHLPN-IGGNLGFGRQEDAHEFMRFA 309
Query: 130 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+D+M L + GE + V P + + + I
Sbjct: 310 IDKMQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHI 340
Query: 189 FGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSS 246
FGG+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G +
Sbjct: 341 FGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKC 399
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
G + V A+K + + IL + L RF G G KL+K V FP++L L + T
Sbjct: 400 DGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDG 457
Query: 307 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
++ +Y+L A V H + GHY + + +W DD V A+ +V AY+
Sbjct: 458 SD--QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYM 515
Query: 365 LFYKQ 369
L Y +
Sbjct: 516 LLYSR 520
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 161/396 (40%), Gaps = 66/396 (16%)
Query: 18 GLINSGNLCFLNATLQALMSC---SPFVQLLQELRTRDIPKAGYPTLTAFVG----FVSD 70
GL N GN CF+N+ LQ+L + S + + L T + Y + + FV +
Sbjct: 247 GLRNLGNTCFMNSVLQSLSNIQEFSCYFNAMPSLETGKHKQKAYHSRSMKENLDDVFVVE 306
Query: 71 ------FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
+ GG K IS P V+ P RQ DA E
Sbjct: 307 ELRKVLLNLSQGGDGSKGAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHE 352
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQS-FLPS 183
FL +++D++H EL ++ + P N A++ + S
Sbjct: 353 FLRYMLDRLHTELQQVSFPVDGSGSGLAGGGGGGHKPGEGKPNPYNVPALSHLHTKGRNS 412
Query: 184 ALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSEA--------------VH 224
++++FGG L+S V+ S PFL L LDI Y++ V
Sbjct: 413 IVTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYTKESAVDGGGDKDKDAPVC 472
Query: 225 TIEDALRLFSAPENL---EGYRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYG 278
I D L F+ E L E Y +S +KS K I+ L +L LH+ RF +
Sbjct: 473 HISDCLSSFTEVEELAETELYYCNSCK-----CKQKSTKRFWIRRLPNVLCLHIKRFRWN 527
Query: 279 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGHYT 331
+ TK+ + FP+ + ++ E R+ Y+L A + HHG S GHYT
Sbjct: 528 NFYRTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCNVYDLAAVIVHHGNGSSCGHYT 587
Query: 332 ADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+ A N W+HF+D +V + ++ V + Y+LFY
Sbjct: 588 SFA-INNGVWMHFNDHTVKEVSSAAVADCKPYILFY 622
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 111/396 (28%), Positives = 164/396 (41%), Gaps = 73/396 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF---VQLLQELRTRDIPKAGYPTLTAFVG----FVSD 70
GL N GN CF+N+ LQ+L + F + L T Y + + FV +
Sbjct: 230 GLRNLGNTCFMNSVLQSLSNIQEFSGYFNTMPSLETGKHKHKAYQSRSMKENLDDVFVVE 289
Query: 71 ------FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQE 124
+ GG K IS P V+ P RQ DA E
Sbjct: 290 ELRKVLLNLSQGGDGSKGAIS---------PECLFLVIWKVVPQFRGH-----RQHDAHE 335
Query: 125 FLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSF-LPS 183
FL +++D++H EL Q S + ++ + +E P N A++ QS S
Sbjct: 336 FLRYMLDRLHTEL---QQVSFPVEISSPSAQKASETKS----NPYNIPALSHLQSKGRNS 388
Query: 184 ALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDI----YSE--------------AVH 224
++++FGG L+S V+ S PFL L LDI Y++ V
Sbjct: 389 IVTNVFGGILQSEVRCLICGMESKKHDPFLDLSLDIPEKFYNKDPPESGEKDKEGNPPVC 448
Query: 225 TIEDALRLFSAPENLEG---YRTSSTGNAGVVTAKKSVK---IQTLSKILILHLMRFSYG 278
I D L F+ E L Y SS +KS K I+ L +L LH+ RF +
Sbjct: 449 NISDCLASFTEVEELTETELYYCSSCK-----CKQKSTKRFWIRRLPNVLCLHIKRFRWN 503
Query: 279 SQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-------YELVATVTHHGRDPSKGHYT 331
+ TK+ + FP+ + ++ E R+ Y+L A + HHG S GHYT
Sbjct: 504 NFYRTKIDLRISFPINALDMSQFVLNNGPETRRSNSSCNIYDLAAVIVHHGNGSSCGHYT 563
Query: 332 ADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+ A N W+HF+D SV + +S V + Y+LFY
Sbjct: 564 SYA-INNGVWMHFNDHSVKEVSSSAVAECKPYILFY 598
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 150/370 (40%), Gaps = 60/370 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GLIN G+ CF+++ LQ L+ F++ + K P G
Sbjct: 138 GLINMGSTCFMSSILQCLIHNPYFIRHSMNQAHSNKCKVRSPDKCFSCALDKIVHELYG- 196
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNF------TPDVPNSISGRPRQEDAQEFLSFIMD 131
VL+ +PFS S F + +++G Q+DA EF FI++
Sbjct: 197 --------VLNTDKPFSSSSATNRQTGFIYLLTCAWKINQNLAGYS-QQDAHEFWQFIIN 247
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
Q+H + ++SL E E+ K+ + T +F G
Sbjct: 248 QIHQ----------------SYVLSLENPKEAESANDKHCDCIVHT----------VFEG 281
Query: 192 QLKSVVKAQG--NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGN 249
L+S + G N + T+ PF+ L LDI + + + L F E L+ +
Sbjct: 282 SLESSIVCPGCQNNSKTTIDPFMDLSLDIKDKK--KLYECLDSFHKKELLKDFNYHCGKC 339
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAE 308
A K + I L +L+L L RF + G+ KL + FP L + + +E
Sbjct: 340 NSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNM-KSYCSKGESE 398
Query: 309 GRK-----------YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
K YEL+ V+H G ++GHY A + QW F+D+ V++I V
Sbjct: 399 SEKHIGNGKVPDIIYELIGIVSHRGT-VNEGHYIAFCKISGGQWFKFNDSMVSSISQEGV 457
Query: 358 LHDQAYVLFY 367
L +QAY+LFY
Sbjct: 458 LKEQAYLLFY 467
>gi|197116355|ref|NP_001127695.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Homo sapiens]
gi|114594805|ref|XP_001148401.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Pan
troglodytes]
gi|301768068|ref|XP_002919453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Ailuropoda melanoleuca]
gi|332238468|ref|XP_003268420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Nomascus leucogenys]
gi|397469742|ref|XP_003806502.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Pan paniscus]
gi|402869827|ref|XP_003898947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Papio anubis]
gi|403284661|ref|XP_003933679.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Saimiri
boliviensis boliviensis]
gi|426344311|ref|XP_004038717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Gorilla gorilla gorilla]
gi|221044064|dbj|BAH13709.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 282
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 283 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 341
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 342 DISKNSESGYILFYQ 356
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 118 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 171
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 172 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 212
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 213 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 241
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 242 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 299
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 300 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 351
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 352 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 411
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 153/364 (42%), Gaps = 46/364 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + L RD+ F T
Sbjct: 59 GLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQT--- 115
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ SPS F+ ++ + P Q+DAQEFL F++D +H+E
Sbjct: 116 -------MWTSSSSEAVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNE 163
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS- 195
+ ++ + G L +E+ K K ++ S + D+F GQLKS
Sbjct: 164 VNRV---TVRPRGNTEDFDHLPDEE-------KGKKMWSKYLEREDSKIVDLFVGQLKSS 213
Query: 196 VVKAQGNKASATVQPFLLLHLDI---YSEAVHTIEDALRLFSAPENLEG------YRTSS 246
+ ++ S PF L L I Y E ++ D +RLF+ + L+G YR +
Sbjct: 214 LTCSECGYCSTVFDPFWDLSLPIAKGYGEV--SLMDCMRLFTKEDVLDGDEKPTCYRCKA 271
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
K +Q KIL+LHL RFS ++KL V FP++ + R+ S
Sbjct: 272 RRRC-----TKKFTVQKFPKILVLHLKRFSEARIRTSKLSTFVNFPMKDLDLREFASDRS 326
Query: 307 AEGRKYELVATVTHHGRDPSKGHYTA-DARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+ Y L A H G GHYTA N +W ++D+ VT + S+V AYVL
Sbjct: 327 SSA-VYNLYAVSNHSG-TTMGGHYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSDAYVL 384
Query: 366 FYKQ 369
FY++
Sbjct: 385 FYER 388
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 143/361 (39%), Gaps = 76/361 (21%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N+GN C++NA LQ L P V +L +++ G + A V+
Sbjct: 112 GLENTGNSCYMNAVLQCLTHTPPLVNYMLSREHSQNCCHQGDCMICAMEAHVTR------ 165
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
S+L G PS E + F + RQEDA EFL F ++ MH
Sbjct: 166 --------SLLYSGDVIQPS--EKLTAAF---------HKHRQEDAHEFLLFTLNAMHTS 206
Query: 137 LL---KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
L KL G T QS L + +IFGG
Sbjct: 207 CLPGSKLLG-------------------------------CTSEQSSL---IHEIFGGSW 232
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV 252
KS +K N+ + ++PFL + LDI + ++ AL E L G N
Sbjct: 233 KSQIKCLHCNETTDLLEPFLDITLDI--QTAQSVNQALENLVMEEQLCGENAYHCDNCRQ 290
Query: 253 VT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
T A K++ ++ K+L+L L RFS + K + V +P D S R+
Sbjct: 291 KTMASKTLTVKDAPKVLLLVLNRFSEFT--GDKKDRKVSYPESF----DFQPYISQSHRQ 344
Query: 312 ---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A + H G GHY + N W DD+SVT + VL + AYVLFY
Sbjct: 345 PLFYSLYAVLVHDGVTCHSGHYFCYVKAGNGHWYKMDDSSVTRCDVNSVLSEPAYVLFYV 404
Query: 369 Q 369
Q
Sbjct: 405 Q 405
>gi|344288367|ref|XP_003415922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Loxodonta
africana]
Length = 359
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 282
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 283 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 341
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 342 DISKNSESGYILFYQ 356
>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
Length = 382
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 52 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 103
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 104 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 151
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 152 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 194
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 195 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 252
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 253 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 305
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 306 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 364
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 365 DISKNSESGYILFYQ 379
>gi|440898709|gb|ELR50140.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Bos grunniens
mutus]
Length = 371
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 41 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 92
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 93 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 140
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 141 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 183
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 184 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 241
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 242 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 294
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 353
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 354 DISKNSESGYILFYQ 368
>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
Group]
gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
sativa Japonica Group]
gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 159/371 (42%), Gaps = 50/371 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYP--TLTAFVGFVSDFDTPS 75
GL N GN C+ N+ LQAL C PF + L E + LT S
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKSTGDVEDNMLTCLADLFSQI---- 79
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
S++KK V+ +P F LK N I +DA EFL+F+++++ D
Sbjct: 80 --SNQKKKTGVI------APKRFIQRLKK-----QNEIFRSYMHQDAHEFLNFLLNELVD 126
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+L+ + + + N++L + + GP N + +P+ + F G L +
Sbjct: 127 -ILEKESKVVAEPCENSSL-------KKNSNGPINVQLNGTKKEPVPTLVHKCFQGILTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVV 253
+ + + + F L LDI E +I L+ FS+ E L + +
Sbjct: 179 ETRCLRCETVTDRDETFFDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ 236
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A+K +KI+ IL++HL RF Y Q KL V FPL+L L+ T +
Sbjct: 237 EAQKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLEL----KLINTVDNSDLE 292
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV---------TAIGTSKVLH--- 359
Y L A + H G P+ GHY + + N WL FDD +V T G+++
Sbjct: 293 YSLFAVLVHVGSGPNHGHYISLVKSHN-HWLFFDDENVEMTDESMVQTFFGSAQEFSGNT 351
Query: 360 DQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 352 DNGYILFYESL 362
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 142/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKCCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHRPGDVIQPS--QALAAGFH---------RGKQEDAHEFLMFTVDAMRKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + V P +K + + IFGG +S
Sbjct: 176 CLPGHKQ----------------------VDPHSKDT---------TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCQGISDTFDPYLDIALDI--QAAQSVKQALEQLVKPEELNGENAYHCGLCLQKAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS KL K+V++P L + + + + Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDM-QPYMSQQNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA G + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFYIQ 374
>gi|390460899|ref|XP_002745872.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Callithrix
jacchus]
Length = 359
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 29 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 80
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 81 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 128
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 129 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 171
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 172 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 229
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 230 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 282
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 283 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 341
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 342 DISKNSESGYILFYQ 356
>gi|432111639|gb|ELK34741.1| Ubiquitin carboxyl-terminal hydrolase 46 [Myotis davidii]
Length = 370
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 140 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 182
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 183 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 240
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 241 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 293
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 294 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 352
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 353 DISKNSESGYILFYQ 367
>gi|29243896|ref|NP_808229.1| ubiquitin carboxyl-terminal hydrolase 46 [Mus musculus]
gi|31377709|ref|NP_073743.2| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Homo sapiens]
gi|197097492|ref|NP_001127337.1| ubiquitin carboxyl-terminal hydrolase 46 [Pongo abelii]
gi|329112531|ref|NP_001179373.2| ubiquitin carboxyl-terminal hydrolase 46 [Bos taurus]
gi|388454621|ref|NP_001253892.1| ubiquitin carboxyl-terminal hydrolase 46 [Macaca mulatta]
gi|114594803|ref|XP_517296.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Pan
troglodytes]
gi|332238466|ref|XP_003268419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Nomascus leucogenys]
gi|402869825|ref|XP_003898946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Papio anubis]
gi|426344309|ref|XP_004038716.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Gorilla gorilla gorilla]
gi|49065850|sp|P62068.1|UBP46_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|49065851|sp|P62069.1|UBP46_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|75055084|sp|Q5RBQ4.1|UBP46_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|10436670|dbj|BAB14881.1| unnamed protein product [Homo sapiens]
gi|22902225|gb|AAH37574.1| Ubiquitin specific peptidase 46 [Homo sapiens]
gi|25059082|gb|AAH39916.1| Ubiquitin specific peptidase 46 [Mus musculus]
gi|55728112|emb|CAH90806.1| hypothetical protein [Pongo abelii]
gi|74208300|dbj|BAE26353.1| unnamed protein product [Mus musculus]
gi|119625840|gb|EAX05435.1| ubiquitin specific peptidase 46, isoform CRA_b [Homo sapiens]
gi|124000509|gb|ABM87763.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|157928604|gb|ABW03598.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|319433467|gb|ADV57651.1| ubiquitin specific protease 46 [Homo sapiens]
gi|380783867|gb|AFE63809.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|384943090|gb|AFI35150.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|410210120|gb|JAA02279.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410254346|gb|JAA15140.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410289942|gb|JAA23571.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410342789|gb|JAA40341.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|417399762|gb|JAA46868.1| Putative ubiquitin carboxyl-terminal hydrolase 46 [Desmodus
rotundus]
Length = 366
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>gi|410957766|ref|XP_003985495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Felis catus]
Length = 369
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 39 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 90
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 91 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 138
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 139 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 181
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 182 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 239
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 240 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 292
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 293 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 351
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 352 DISKNSESGYILFYQ 366
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 139/356 (39%), Gaps = 62/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHV-------- 159
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 160 ------RTARQATGRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV +IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------NIFGGSLRSQ 238
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDDGSKVYQCERCKQK- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V A+K + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKARKQLTVSKAPYVLTIHLKRFE--AHRSEKIDRKVDFASAIDM-KPFVSGPHEGNLK 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVLQVSEKTVFNQKAYMLFY 407
>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
Length = 384
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 54 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 105
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 106 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 153
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 154 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 196
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 197 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 254
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 255 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 307
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 308 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 366
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 367 DISKNSESGYILFYQ 381
>gi|281352654|gb|EFB28238.1| hypothetical protein PANDA_008082 [Ailuropoda melanoleuca]
gi|351697652|gb|EHB00571.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Heterocephalus
glaber]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 24 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 75
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 76 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 123
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 124 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 166
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 167 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 224
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 225 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 277
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 278 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 336
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 337 DISKNSESGYILFYQ 351
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 151/365 (41%), Gaps = 62/365 (16%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 467 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 524
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 525 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 566
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK G +N + SL EE S + FGG
Sbjct: 567 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 597
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 598 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 656
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+ AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 657 KS--YEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 711
Query: 308 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 712 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 771
Query: 366 FYKQV 370
Y +
Sbjct: 772 LYARC 776
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 146/360 (40%), Gaps = 72/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL--QELRTRDIPKAGYPTLTAFVGFVSD--FDT 73
GL N+GN C+LNA LQ L P + QE G + A V+ +
Sbjct: 52 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEYSQTCCSPEGC-KMCAMEAHVTQSLLHS 110
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
SG D+ +P + S + +QEDA EFL F ++ M
Sbjct: 111 HSG-----------DVMKPSQ--------------ILTSAFHKHQQEDAHEFLMFTLETM 145
Query: 134 HDELLKL--QGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
H+ L++ Q E TS ED S + DIFGG
Sbjct: 146 HESCLQVHRQSEPTS-------------EDS--------------------SPIHDIFGG 172
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
+S +K S T FL + LDI S ++ AL E L G G
Sbjct: 173 LWRSQIKCLHCQGTSDTYDRFLDVPLDISS--AQSVNQALWDTEKSEELRGENAYYCGRC 230
Query: 251 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ A K++ I + K+L+L L RFS S G+ KL + V +P L L + L P+
Sbjct: 231 RQKMPASKTLHIHSAPKVLLLVLKRFS-ASMGN-KLDRKVSYPEFLDL-KPYLSQPTGGP 287
Query: 310 RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G GHY + + + +W DD VT+ + VL++ AYVLFY Q
Sbjct: 288 LPYALYAVLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFYVQ 347
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 145/357 (40%), Gaps = 66/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 145
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P S + A K+ +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DVMKP-SQILTSAFHKH-------------QQEDAHEFLMFTLETMH 180
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ L++ +S P++ S + DIFGG +
Sbjct: 181 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 209
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 252
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 210 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 267
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 268 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 324
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 325 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 143/356 (40%), Gaps = 58/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+T+Q L P LL + TR + + L + SG
Sbjct: 123 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNHIIQAFANSG 182
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 183 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 223
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + L + + T+ + IFGG L+S
Sbjct: 224 CL-------------SGCAKLDRQTQATTL------------------VHQIFGGYLRSR 252
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 253 VKCSMCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDVLSGENAYMCAKCKRKVP 310
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 311 ASKRFTIHRTSNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVMYGL 367
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
A + H G GHY + N QW +D+SV A VL+ QAYVLFY ++
Sbjct: 368 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHASNIKVVLNQQAYVLFYLRI 423
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 75
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 53 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 112
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P + + F + RQEDA EFL F +D
Sbjct: 113 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 142
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+LK G +G VGP+ + ++ I GG +S
Sbjct: 143 -VLKAAGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 175
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 176 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCRQKT 233
Query: 255 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 234 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 290
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + + W DDA VTA T+ VL+ AYVLFY
Sbjct: 291 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 344
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 145/357 (40%), Gaps = 66/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 145
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P S + A K+ +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DVMKP-SQILTSAFHKH-------------QQEDAHEFLMFTLETMH 180
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ L++ +S P++ S + DIFGG +
Sbjct: 181 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 209
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 252
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 210 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 267
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 268 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 324
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 325 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 153/371 (41%), Gaps = 50/371 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQEL--RTRDIPKAGYPTLTAFVGFVSDFDTPS 75
GL N GN C+ N+ LQAL C PF L E ++ LT S
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFRDQLLEYYANNKNTGDVEENMLTCLADLFSQI---- 79
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
SS+KK V+ +P F LK N I +DA EFL+F+++++ D
Sbjct: 80 --SSQKKKTGVI------APKRFIQRLKK-----QNEIFRSYMHQDAHEFLNFLLNELVD 126
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L K N A +L +L+ + + GP + + + + F G L +
Sbjct: 127 ILEKEH------NAARESLQNLSLQK--NSNGPIDGQPNGSHKELAVTWVHKCFQGILTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVV 253
+ + + + F L LDI E ++ L+ FS+ E L + +
Sbjct: 179 ETRCLRCETVTDRDETFFDLSLDI--EQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQ 236
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A+K +KI+ IL++HL RF Y Q KL V FPL+L LL T +
Sbjct: 237 EAQKRMKIKKPPNILVIHLKRFKYIEQLQRYKKLSYRVVFPLEL----KLLNTVDNSDLE 292
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y L A V H G P+ GHY + + N WL FDD +V S V
Sbjct: 293 YSLFAVVVHVGSGPNHGHYISLVKSHN-HWLFFDDENVEMTDESMVQAFFGSPQEFSGNT 351
Query: 360 DQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 352 DNGYILFYESL 362
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 155/365 (42%), Gaps = 62/365 (16%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 200 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 255
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGR---PRQEDAQEFLSFI 129
+S+ + PF+P KN +PN I G RQEDA EF+ F
Sbjct: 256 CHIQRASESMH--------PFAP-------KNILSHLPN-IGGNLGFGRQEDAHEFMRFA 299
Query: 130 MDQMHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDI 188
+D+M L + GE + V P + + + I
Sbjct: 300 IDKMQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHI 330
Query: 189 FGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSS 246
FGG+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G +
Sbjct: 331 FGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKC 389
Query: 247 TGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPS 306
G + V A+K + + IL + L RF G G KL+K V FP++L L + T
Sbjct: 390 DGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDG 447
Query: 307 AEGRKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
++ +Y+L A V H + GHY + + +W DD V A+ +V AY+
Sbjct: 448 SD--QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYM 505
Query: 365 LFYKQ 369
L Y +
Sbjct: 506 LLYSR 510
>gi|301620627|ref|XP_002939670.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Xenopus
(Silurana) tropicalis]
Length = 1059
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 31/355 (8%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL N GN C++N+ LQ L + ++ + + + +G + G
Sbjct: 719 GLRNLGNTCYMNSILQCLCNTPHLIEYFNNNFYQ-----AHINRSNLLGHKGEVAEEFGC 773
Query: 78 SSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
+ L G + SP F+ + + +G Q D+QE L F+MD +H+
Sbjct: 774 I-----MRALWTGQYKYISPKDFKITIGK----INEQFAGYTHQ-DSQELLLFLMDGLHE 823
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+L K N +S ++ + SA + + S + +F GQ KS
Sbjct: 824 DLNKKADNRKRQKEENNDHLSDSQAAD---------SAWYKHKQLNESIIVALFQGQFKS 874
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
V+ K S T + F+ L L + S + +++D ++ F+ E L + R +
Sbjct: 875 TVQCLTCQKKSRTFEAFMYLSLPLPSTSKCSLQDCIKAFAKEEKLTDSNRFDCSNCKTQR 934
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K ++I L IL++HL RFS+ + KL V FPL+ + ++ P + Y
Sbjct: 935 VATKKIEIWKLPPILLVHLKRFSFEGRWRQKLQSYVDFPLESLDLSQYVIGPK-NVKTYN 993
Query: 314 LVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L H+G GHYTA + +W FDD V+ I S V AY+LFY
Sbjct: 994 LFGVSNHYG-GLDGGHYTAYCKNALKQRWFKFDDHDVSEISVSSVKTSAAYMLFY 1047
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 150/365 (41%), Gaps = 62/365 (16%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 657 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 714
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 715 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 756
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK G +N + SL EE S + FGG
Sbjct: 757 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 787
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 788 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 846
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 847 --KSYEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 901
Query: 308 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 902 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 961
Query: 366 FYKQV 370
Y +
Sbjct: 962 LYARC 966
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 145/357 (40%), Gaps = 66/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 51 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 110
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P S + A K+ +QEDA EFL F ++ MH
Sbjct: 111 SG-----------DVMKP-SQILTSAFHKH-------------QQEDAHEFLMFTLETMH 145
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ L++ +S P++ S + DIFGG +
Sbjct: 146 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 174
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 252
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 175 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 232
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 233 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 289
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 290 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 346
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 150/365 (41%), Gaps = 62/365 (16%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
+L P GL+N GN C+ NA LQ L P LQ L ++ K + F +
Sbjct: 645 ELRPCGLMNCGNSCYANAVLQCLAFTPPLTSYFLQGLHSKSCLKKEWCFTCEFESLI--L 702
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
G S P SP + ++N + G ++EDA EFL + +D
Sbjct: 703 KAKEGNS-------------PLSPLGILSQIRNIGSHL-----GNGKEEDAHEFLRYAID 744
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK G +N + SL EE S + FGG
Sbjct: 745 AMQSVCLKEAG----VNASG----SLEEET---------------------SLIGLTFGG 775
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S +K + + S + + L ++I + + T+E+AL F++ E L+G Y+ S
Sbjct: 776 YLRSKIKCMKCHGKSERHERMMDLTVEIEGD-IGTLEEALHKFTSTEILDGENKYQCSRC 834
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
AKK + + IL + L RF G G KL+KS+RFP L L + S
Sbjct: 835 --KSYEKAKKKLTVSEAPNILTIALKRFQSGKFG--KLNKSIRFPEILDLA-PFMSGTSD 889
Query: 308 EGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
+ Y L A V H GHY + ++W DD++V + +VL AY+L
Sbjct: 890 KSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKGAYML 949
Query: 366 FYKQV 370
Y +
Sbjct: 950 LYARC 954
>gi|147810044|emb|CAN67091.1| hypothetical protein VITISV_006756 [Vitis vinifera]
Length = 366
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 159/385 (41%), Gaps = 57/385 (14%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 61
K++ D P G L N GN C+ N+ AL C PF + L E T +++ A L
Sbjct: 10 KALGDQFPEGERYFGLENFGNTCYCNS---ALYFCVPFREQLLEYYTNNKNLADAEENLL 66
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T SS+KK V+ +P F LK N + +D
Sbjct: 67 TCLADLFMQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 109
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+F+++++ D L K S S ++ A GPK A + L
Sbjct: 110 AHEFLNFLLNELVDILEKEASASKSDPETSSPPEKTAN-------GPKTAQANGVQKEPL 162
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + F G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 163 VTWVHKNFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLN 220
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 221 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 280
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
T +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 281 SN----TVEDADSEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESSV 335
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 336 QTFFGSAQEYSSNTDHGYILFYESL 360
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 141/356 (39%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++NA+LQ L P +L + ++ + L ++ P
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHKCCMLCTMEAHITRALHCP- 139
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G PS +A+ F R +QEDA EFL FI+D M
Sbjct: 140 --------------GHVIQPS--QALAAGFH---------RGKQEDAHEFLMFIVDAMKK 174
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L + + D +T + + IFGG +S
Sbjct: 175 ACLPGHKQ--------------VDHDSEDT-----------------TLIHQIFGGCWRS 203
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVV 253
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 204 QIKCLHCQGVSDTFDPYLDIALDI--QAAQSVKQALEQVVKPEELNGENAYHCGLCLQKA 261
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K+ + T +K+LIL L RFS KL K+V++P L + + + + Y
Sbjct: 262 PASKTFTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDI-QPYMSQQNTGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQ 374
>gi|339255776|ref|XP_003370631.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
gi|316965826|gb|EFV50494.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
Length = 330
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 158/369 (42%), Gaps = 67/369 (18%)
Query: 23 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 82
GN C+ N+ +QAL C PF + + +++ + KAG + F + S ++K+
Sbjct: 2 GNTCYCNSVIQALYFCRPFREKVLNYKSQ-MKKAGNQKENLLLCLADLFHSIS---TQKR 57
Query: 83 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 142
+ + +P F LK N + Q+DA EFL+++++ + D LL+ +
Sbjct: 58 RVGTI------APKKFIGRLKK-----ENDLFDNYMQQDAHEFLNYLLNTVADILLEEKR 106
Query: 143 ESTSINGANTALVS--LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA- 199
I+G + V LAE W + D+F G L + +
Sbjct: 107 HEKRISGGHKTQVKDKLAEH-TW---------------------VHDVFQGTLTNETRCL 144
Query: 200 QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKS 258
S+ + FL L +D+ +I LR FSA E L ++ A+K
Sbjct: 145 NCETVSSKDEDFLDLSVDVQQNT--SITHCLREFSATETLCNEHKYYCDICCSKQEAQKR 202
Query: 259 VKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL---GRDLLVTPSAEGRKYE 313
++I+ L IL LHL RF Y Q + TKL V FPL+L L D V P R Y+
Sbjct: 203 MRIKKLPLILALHLKRFKYVEQYNRYTKLSYRVLFPLELRLFNTSHDA-VNPD---RMYD 258
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV--------------TAIGTSKVLH 359
LVA V H G P++GHY + WL FDD V A G+ +
Sbjct: 259 LVAVVVHCGSTPNRGHYITVVKS-QGFWLLFDDDVVDKMDHINIEDFFGMAADGSLQKNS 317
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 318 ESGYILFYQ 326
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 75 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 130
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+S+ + PF+P + L N ++ G RQEDA EF+ F +D+
Sbjct: 131 CHIQRASESMH--------PFAPKNILSHLPNIGGNL-----GFGRQEDAHEFMRFAIDK 177
Query: 133 MHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M L + GE + V P + + + IFGG
Sbjct: 178 MQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHIFGG 208
Query: 192 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 249
+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G + G
Sbjct: 209 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKCDGC 267
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ V A+K + + IL + L RF G G KL+K V FP++L L + T ++
Sbjct: 268 SDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDGSD- 324
Query: 310 RKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+Y+L A V H + GHY + + +W DD V A+ +V AY+L Y
Sbjct: 325 -QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLY 383
Query: 368 KQ 369
+
Sbjct: 384 SR 385
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAM-- 209
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPIV 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
carolinensis]
Length = 366
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 158/373 (42%), Gaps = 67/373 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D L
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
+ + + ++ EE+ NK +T + +IF G L +
Sbjct: 137 QEEKKQEKQNGRLRNGNMNETEEN--------NKQDLT--------WVHEIFQGTLTNET 180
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 181 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 236
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 237 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAIN 291
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 292 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 350
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 351 SKNSESGYILFYQ 363
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 160/370 (43%), Gaps = 48/370 (12%)
Query: 18 GLINSGNLCFLNATLQALMSCSPF-VQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C+ N+ LQAL C PF QLL+ G + + D S
Sbjct: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYANNKGAGDGEENMLTCLA-----DLFSQ 78
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
S++KK V+ +P F LK N + +DA EFL+F+++++ D
Sbjct: 79 ISNQKKKTGVI------APKRFIQRLKK-----QNELFRSYMHQDAHEFLNFLLNELVD- 126
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
+L+ + +T N++L + + GP N + + + F G L +
Sbjct: 127 ILEKECNATKEPPQNSSL-------QKNSNGPINGQPNGSHRELDTTWVHKCFQGILTNQ 179
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY-RTSSTGNAGVVT 254
+ + + + FL L LDI E +I L+ FS+ E L + +
Sbjct: 180 TRCLRCETVTDRDETFLDLSLDI--EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQE 237
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
A+K +KI+ IL++HL RF Y Q KL V FPL+L L+ T +Y
Sbjct: 238 AQKRMKIKKPPNILVIHLKRFKYIEQLGRYKKLSYRVVFPLEL----KLINTVDNSDLEY 293
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASV---------TAIGTSKVLH---D 360
L A + H G P+ GHY + + N WL FDD +V T G+++ D
Sbjct: 294 SLFAVLVHVGSGPNHGHYISLVKSHN-HWLFFDDENVEMTDESMVQTFFGSAQEFSGNTD 352
Query: 361 QAYVLFYKQV 370
Y+LFY+ V
Sbjct: 353 NGYILFYESV 362
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P E +L F R ++EDA EFL F ++ +
Sbjct: 147 --------ALLHAGEVIRPR--EDLLAGFH---------RHQKEDAHEFLMFTLNAVQQG 187
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLSVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTLVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 146/354 (41%), Gaps = 66/354 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAF-VGFVSDFDTPS 75
GL N+GN C+LNA LQ L P +L ++ ++ ++ L A F+ +P
Sbjct: 83 GLQNTGNTCYLNAALQCLTYTPPLANYMLSQVHSQSCRRSDRCILCAVETHFLWALHSPG 142
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P + + F + RQEDA EFL F +D
Sbjct: 143 ------------DVIQPC-----QVLAAGFHTN---------RQEDAHEFLMFALD---- 172
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+LK G +G VGP+ + ++ I GG +S
Sbjct: 173 -VLKAAGLPGLTDG----------------VGPQEDQSPSQ----------QIVGGHWRS 205
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
++ Q S T+ P+L + LDI + ++E AL+ PE L G T
Sbjct: 206 QIQCLQCQGISETLDPYLEIALDI--KTADSVEQALQHLVQPEELAGENAYHCATCRQKT 263
Query: 255 A-KKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K++ +Q+ K+L+ L RFS + KL V +P L + R + + Y
Sbjct: 264 AASKTLTLQSAGKVLLFVLKRFSEFT--GEKLGGQVHYPECLDM-RPYMSQQNGRPLDYV 320
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
L A + H G GHY + + W DDA VTA T+ VL+ AYVLFY
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 139/360 (38%), Gaps = 74/360 (20%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L P ++ + P TL A V+
Sbjct: 93 GLQNLGNTCYVNAALQCLSHTPPLASWMVSQQHATLCPARSACTLCAMRAHVTR------ 146
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++L G P + +L F R +QEDA EFL F ++ M
Sbjct: 147 --------ALLHAGEVIRPR--KDLLAGFH---------RHQQEDAHEFLMFTLNAMQQG 187
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S A ED + + IFGG +S
Sbjct: 188 CLSASQPSGH-----------ASEDT--------------------TVIRQIFGGTWRSQ 216
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
++ + S T P+L + LDI A ++E ALR PE L+ G V
Sbjct: 217 IQCLRCLGVSDTFDPYLDISLDI--TAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVP 274
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
A K + + + S++L+L L RF+ S K + VR+P L L P RK
Sbjct: 275 ATKRLTLHSTSQVLVLVLKRFTPVS--GAKRAQEVRYPQCLDL------QPYTSERKAGP 326
Query: 312 --YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
Y L A + H G +GHY R N QW DDA VTA + L AYVLFY +
Sbjct: 327 LGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFYAR 386
>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 94 SPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTA 153
SPS F+ ++ + P Q+DAQEFL F++D +H+E+ ++ S N
Sbjct: 58 SPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGLHNEVNRVTLRPKS----NPE 108
Query: 154 LVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATV-QPFL 212
+ +DE K + + S + D+F GQLKS + +TV PF
Sbjct: 109 NLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFW 162
Query: 213 LLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSSTGNAGVVTAKKSVKIQTLSKI 267
L L I Y E T+ D +RLF+ + L+G + + G K IQ KI
Sbjct: 163 DLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKI 220
Query: 268 LILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSK 327
L+LHL RFS ++KL V FPL+ + R+ + + Y L A H G
Sbjct: 221 LVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENTNHAVYNLYAVSNHSG-TTMG 278
Query: 328 GHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
GHYTA R +W F+D+SVT + +S+V AY+LFY+
Sbjct: 279 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 320
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 154/362 (42%), Gaps = 56/362 (15%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
D LP GL+N GN CF N LQ L P L + D + Y + F+ +
Sbjct: 126 DYLPCGLLNCGNSCFANVVLQCLSCTRPLAAYLLGM---DHSRECYKRHEDWC-FLCELQ 181
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+S+ + PF+P + L N ++ G RQEDA EF+ F +D+
Sbjct: 182 CHIQRASESMH--------PFAPKNILSHLPNIGGNL-----GFGRQEDAHEFMRFAIDK 228
Query: 133 MHDELL-KLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M L + GE + V P + + + IFGG
Sbjct: 229 MQSACLDEFGGE--------------------KAVDPSTQET---------TLIQHIFGG 259
Query: 192 QLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 249
+L+S V+ S + + L ++I+ +A ++E+ L F+A E L+G + G
Sbjct: 260 RLQSQVQCTACGMVSNRYENMMDLTVEIHGDA-DSLEECLDKFTAVEWLDGDNKYKCDGC 318
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
+ V A+K + + IL + L RF G G KL+K V FP++L L + T ++
Sbjct: 319 SDYVKAQKRLTVYQAPNILTITLKRFQSGRFG--KLNKRVTFPMKLDLTPYMSSTDGSD- 375
Query: 310 RKYELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
+Y+L A V H + GHY + + +W DD V A+ +V AY+L Y
Sbjct: 376 -QYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQGAYMLLY 434
Query: 368 KQ 369
+
Sbjct: 435 SR 436
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 141/356 (39%), Gaps = 58/356 (16%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+T+Q L P LL R P+ + L + SG
Sbjct: 71 GLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHARSCPQGSFCMLCVMQNHLVQAFANSG 130
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
+ K + + D+ + + ++F QEDA EFL + +D M
Sbjct: 131 NAIKPVSF-IRDLRK---------IARHFRFG---------NQEDAHEFLRYTIDAMQKA 171
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L + L + + T+ + IFGG L+S
Sbjct: 172 CL-------------SGYAKLDRQTQATTL------------------VHQIFGGCLRSR 200
Query: 197 VKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGV-VT 254
VK K+ S T P+L + L+I A I AL LF P+ L G V
Sbjct: 201 VKCSVCKSVSDTYDPYLDVALEIRQAA--NIVRALELFVKPDALSGENAYMCARCKKKVP 258
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K I S +L L L RF+ S G K+ K V +P L + R + S E Y L
Sbjct: 259 ASKRFTIHRASNVLTLSLKRFANFSGG--KITKDVGYPEFLNI-RPYMSQSSGEPVVYGL 315
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
A + H G GHY + N QW +D+ V + VL+ QAYVLFY ++
Sbjct: 316 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVLFYLRI 371
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 151/368 (41%), Gaps = 72/368 (19%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
L P GL N GN C+ NA LQ L P L Q ++ K G+ F +
Sbjct: 411 LFPFGLTNCGNSCYANAVLQCLAYTRPLTSYLFQGFHSKRCQKKGWCFTCEFEYLIQ--- 467
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
K+ IS P SP + + + GR R+EDA EFL ++D
Sbjct: 468 ------KAKEGIS------PLSPIGILSKIHKIGSHL-----GRGREEDAHEFLRCVVDT 510
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
M LK G S+ LAEE + +S FGG
Sbjct: 511 MQSICLKEVGVSSP----------LAEE---------------------TTLVSYTFGGY 539
Query: 193 LKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE-GYRTSSTGNA 250
L+S +K + S + + L ++I + + T+E+AL F+APE L+ + + +
Sbjct: 540 LRSKIKCLRCLGKSERYERMMDLTVEIDGD-IGTLEEALGQFTAPEILDKDNKYNCSRCK 598
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
V A+K + + IL + L RF G+ KL+KSV+FP L + P G
Sbjct: 599 TYVKARKKLTVLEAPNILTIVLKRFQSGN--FEKLNKSVQFPEVLNMA------PYMSGT 650
Query: 311 K-----YELVATVTHHGRD----PSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQ 361
K Y L A V H D GHY + +W DD+ V + S+VL ++
Sbjct: 651 KDKSPLYSLYAVVVHLDLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSER 710
Query: 362 AYVLFYKQ 369
AY+L Y +
Sbjct: 711 AYMLLYAR 718
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 149/363 (41%), Gaps = 58/363 (15%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
++ P GLIN GN C+ NA LQ L P +Q L ++ K F +F
Sbjct: 554 EMRPCGLINCGNSCYANAVLQCLAFTPPLTSYFVQGLHSKACVKKER-------CFSCEF 606
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ K + + P SP + L+N + G R+EDA EFL + +D
Sbjct: 607 E--------KVILKAKEGKSPLSPIGILSQLQNIGSQL-----GNGREEDAHEFLRYAID 653
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M LK +N A+ S EE + + FGG
Sbjct: 654 AMQSVCLK----EARVN----AVDSFEEE---------------------ATLIGLTFGG 684
Query: 192 QLKSVVKAQGNKASATVQPFLL-LHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA 250
L+S +K + Q ++ L ++I + + +EDALR F+ E L+G G
Sbjct: 685 YLRSKIKCMKCHYKSEWQERMMDLTVEIEGD-IGKLEDALRRFTGTEILDGDNKYQCGRC 743
Query: 251 -GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
AKK + I +L + L RF G G KL+KS+RFP L L + T S +
Sbjct: 744 RSYEKAKKKLTILEAPNVLTIALKRFQSGKFG--KLNKSIRFPEILDLAPYMSGT-SDKS 800
Query: 310 RKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H GHY + ++W DD++VTA+ +VL AY+L Y
Sbjct: 801 PIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKGAYMLLY 860
Query: 368 KQV 370
+
Sbjct: 861 ARC 863
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 164/370 (44%), Gaps = 51/370 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA-FVGFVSDFDTPSG 76
GL N GN C++N+ QAL C PF +L+ + + P +A G P+
Sbjct: 41 GLENFGNTCYVNSVFQALYFCHPFRELIIQAHDKSNPPVTNSNGSAPLTGPPIPIAPPTM 100
Query: 77 GSSKKK-----NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
S+ + + + LD G +P F LK N + +DA EFL ++++
Sbjct: 101 FSALRALFVHISSNSLDKGV-VAPRAFVEKLKKE-----NELFRSSMHQDAHEFLIYLLN 154
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
++ ++ L+ E+ ++ +++ +++ + T S + + D+F G
Sbjct: 155 KIAED---LEEEARNVRSGSSSG--------------EDRKTNSSTNSNI---VHDLFEG 194
Query: 192 QLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGN 249
L S + S+ + FL L +DI E ++ LR FSA E L + +
Sbjct: 195 VLTSETRCLTCETVSSRDEAFLDLSIDI--EQNSSVTACLRQFSASEMLCQKNKFFCDSC 252
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL--GRDLLVTP 305
G+ A+K +KI+ L +L LHL RF Y KL V FPL+L L D V P
Sbjct: 253 CGLQEAEKRMKIKRLPNVLALHLKRFKYQEDVGKYIKLAYRVAFPLELRLFNTADDAVDP 312
Query: 306 SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R YEL A V H G P GHY A + N+ WL FDD SV I S +
Sbjct: 313 D---RLYELFAIVIHIGNGPYHGHYVAIVKS-NESWLVFDDDSVEKIKESDISKYYGDSN 368
Query: 360 -DQAYVLFYK 368
AYVLFY+
Sbjct: 369 SGAAYVLFYQ 378
>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L +L LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMVLALHLKRFKYMEQLRRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>gi|334331351|ref|XP_001371592.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Monodelphis domestica]
Length = 379
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 161/373 (43%), Gaps = 67/373 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 49 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 100
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 101 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 148
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + E V NK +T + +IF G L +
Sbjct: 149 LQEEKKQEKQNG------KLKNGNMNEPV-ENNKPELT--------WVHEIFQGTLTNET 193
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 194 RCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ-- 249
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG-- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 250 EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDAVN 304
Query: 310 --RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH-------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 305 LDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSDI 363
Query: 360 ----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 364 SKNSESGYILFYQ 376
>gi|344233822|gb|EGV65692.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 481
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 50/356 (14%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
+G +N G+ CF+++ LQ L+ +P ++ +E D + T
Sbjct: 166 KGFVNFGSTCFISSILQTLIH-NPMLK--REFFNSDEHYFNCDVSECITCSIDKIFTEFF 222
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
SS + + ++ + + KN S++G Q DA EF +++++ H +
Sbjct: 223 TSSNNDSFGMTNL-------LINSWYKN------KSLTGYEEQ-DAHEFWQYLLNEFHKD 268
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
++L+ + G N E+ + +T F G+L+S+
Sbjct: 269 HMRLKSDM----GENDVFGHTYEDCD----------CITHKH----------FAGELESL 304
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVH-TIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
+ + + T+ P + L L++ + H T+ D L LF+ E LE Y+
Sbjct: 305 IMCSDCDNTTRTIDPIMDLSLELTNLPDHSTVYDCLNLFTKEETLENYKCQFCNKNS--K 362
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK--- 311
KKS+KI +S +L + L RF + K +R PL L L D L S EG
Sbjct: 363 PKKSLKINKMSSVLSIQLKRFKHNVNSFIKNDIPIRNPLYLNLS-DYLSQDSNEGSTNQF 421
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
YEL A V H G + GHY + N+QWL FDD+ +T + ++ AY+LFY
Sbjct: 422 YELFALVVHIGS-VNTGHYVVLIKTENNQWLKFDDSIITLVPQQEIESINAYLLFY 476
>gi|392346694|ref|XP_003749615.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50
[Rattus norvegicus]
Length = 385
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 147/358 (41%), Gaps = 51/358 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L S SP V+ L + K TAF ++D
Sbjct: 41 GLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKYITALQKDCSEVTTAFAYLMTDM----- 95
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + + + P + Q+DAQEFL ++++++H+
Sbjct: 96 ---------WLGDSDCVSPEIFLSAVGSLYPAF-----LKKTQQDAQEFLIYVLNELHEA 141
Query: 137 LLK-LQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK- 194
L K +G ++ A V S +TR +F GQL
Sbjct: 142 LKKHCRGRASEKRTAQNCC---------RKVPAHETSIITR-----------LFEGQLSY 181
Query: 195 SVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVT 254
S+ + + + F +L L I SE +++D L+ F + L ++ +
Sbjct: 182 SITCLKCETCTYKNEVFTILSLPIPSEYECSLQDCLQCFFQQDTLTW---NNQIHCSFCE 238
Query: 255 AKKSVKIQTL----SKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR 310
K+ ++T KI++LHL RF KL + +PL + + +
Sbjct: 239 IKQETAVRTTISKAPKIIVLHLKRFDIQGAVKKKLRTDIHYPLTNLDLTPYICPVFRKHP 298
Query: 311 KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 299 KYNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 355
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 140/361 (38%), Gaps = 76/361 (21%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++NA+LQ L P +L + ++ + L ++ P
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHKCCMLCTMEAHITRALHCP- 139
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G PS +A+ F R +QEDA EFL FI+D M
Sbjct: 140 --------------GHVIQPS--QALAAGFH---------RGKQEDAHEFLMFIVDAMKK 174
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L + + D +T + + IFGG +S
Sbjct: 175 ACLPGHKQ--------------VDHDSEDT-----------------TLIHQIFGGCWRS 203
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVV 253
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 204 QIKCLHCQGVSDTFDPYLDIALDI--QAAQSVKQALEQVVKPEELNGENAYHCGLCLQKA 261
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK-- 311
A K+ + T +K+LIL L RFS KL K+V++P L V P +
Sbjct: 262 PASKTFTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYP------ECLDVQPYMSQQNTG 313
Query: 312 ---YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYK 368
Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY
Sbjct: 314 PLVYVLYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYI 373
Query: 369 Q 369
Q
Sbjct: 374 Q 374
>gi|354471307|ref|XP_003497884.1| PREDICTED: LOW QUALITY PROTEIN: putative ubiquitin
carboxyl-terminal hydrolase 50-like [Cricetulus griseus]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 149/360 (41%), Gaps = 55/360 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA LQ L + SP V+ L + K TAF ++D
Sbjct: 70 GLRNLGNTCYMNAILQCLCNISPLVEYFLSGKYITALQKDCSEVTTAFAYLMTDM----- 124
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
L SP +F + L + P + Q+DAQEFL ++++++H+
Sbjct: 125 ---------WLGDSDCVSPEIFLSALGSLYPAF-----LKKTQQDAQEFLIYVLNELHEA 170
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK-S 195
L K + A + + V S +TR +F GQL S
Sbjct: 171 LKK--------HCRRRAYERRSSQKCCRKVMASETSIITR-----------LFEGQLNYS 211
Query: 196 VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTA 255
+ + + + F +L L I SE +++D L+ F + L + + +
Sbjct: 212 ITCLKCENCTYKNEVFTVLSLPIPSEYECSLQDCLQCFFQQDTL-TWNNQIHCSFCEIKQ 270
Query: 256 KKSVK--IQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA-----E 308
+ +V+ I KI++ HL RF KL +R+PL +L +TP +
Sbjct: 271 ETAVRATISKAPKIIVFHLKRFDIQGSVKRKLRTDIRYPLT-----NLDITPYICPVFRK 325
Query: 309 GRKYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
KY L A V H G D GHYTA + Q W FDD V+ I + V AY+LFY
Sbjct: 326 HPKYNLCAVVNHFG-DLDGGHYTAFCKNSVTQAWYSFDDTRVSEIPDTSVQTATAYLLFY 384
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 145/356 (40%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 112 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPG 171
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL +D M
Sbjct: 172 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQHTVDAM-- 209
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
+ +NG+N L + T+ + IFGG L+S
Sbjct: 210 -------QKACLNGSNK----LDRHTQATTL------------------VCQIFGGYLRS 240
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 241 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVNKALEQFVKPEQLDGENSYKCSKCKK-- 296
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L L L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 297 MVPASKRFTIHRSSNVLTLSLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 353
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL QAYVLFY
Sbjct: 354 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 409
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 150/356 (42%), Gaps = 61/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L P ++ +R +G+ + V +
Sbjct: 235 GLNNVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQASGFCIFCSLETQV--LQSHKC 292
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
G G+ +P + ++ P RQED+ EF+ F+++ +
Sbjct: 293 G------------GKSITPKEIASNIRKIAPTFRIG-----RQEDSHEFIRFMIESLQK- 334
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
VSL++ PK + + + + IFGG L+S
Sbjct: 335 ------------------VSLSKY-------PK---GSINHRDAMTTVIGSIFGGYLRSQ 366
Query: 197 VK-AQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAGV 252
VK +Q S T PF+ L +DI ++ L F E L+G Y+ S +
Sbjct: 367 VKCSQCQYESNTYDPFMDLCVDI--NQADSLTKGLTNFVKSELLDGSNKYKCSKC--KKL 422
Query: 253 VTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V A+K ++I IL + RFS+ GS G K+++ ++F L L +T S
Sbjct: 423 VKAQKRLQIHIAPPILTCQIKRFSFLGSYGG-KINRQIQFDQSLNLSP--FMTQSNNHSI 479
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y+L A + H G S GHY + N W + DD+SV+ + + VL +AY+LFY
Sbjct: 480 YDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTVLSQKAYMLFY 535
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 144/356 (40%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG-RKYE 313
A K++ + T +K+LIL L RFS K+ K+V++P L L ++ + G Y
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIDKNVQYPE--CLDMKLYMSQTNSGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 158/373 (42%), Gaps = 50/373 (13%)
Query: 9 KSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGF 67
KS + L+ GL N GN CF+N+ LQ L + L RD+ F
Sbjct: 52 KSAQGLV--GLKNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNSRTNTALMEEF 109
Query: 68 VSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLS 127
T + SPS F+ ++ + P Q+DAQEFL
Sbjct: 110 AKLIQT----------MWTSSSSEAVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLR 154
Query: 128 FIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSD 187
F++D +H+E+ ++ + G L +E+ K K ++ S + D
Sbjct: 155 FLLDGLHNEVNRV---TVRPRGTVEDFDHLPDEE-------KGKKMWSKYLEREDSKIVD 204
Query: 188 IFGGQLKSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG- 241
+F GQLKS + +TV PF L L I Y E ++ D +RLF+ + L+G
Sbjct: 205 LFVGQLKSSLTCSHCGFCSTVFDPFWDLSLPIAKKGYGEV--SLMDCMRLFTKEDVLDGD 262
Query: 242 -----YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLV 296
YR + K IQ KIL+LHL RFS + S KL V FP++ +
Sbjct: 263 EKPTCYRCKARRRC-----TKKFTIQKFPKILVLHLKRFSEARRTS-KLSTFVNFPMKDL 316
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTS 355
R+ S Y L A H G GHYTA R + +W F+D+ VT + +S
Sbjct: 317 DLREFASENSINA-VYNLYAVSNHSG-TTMGGHYTAYCRNPSSGEWYTFNDSRVTPMSSS 374
Query: 356 KVLHDQAYVLFYK 368
+V AYVLFY+
Sbjct: 375 QVRSSDAYVLFYE 387
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY 408
>gi|307180288|gb|EFN68321.1| Ubiquitin carboxyl-terminal hydrolase 46 [Camponotus floridanus]
Length = 327
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 154/364 (42%), Gaps = 61/364 (16%)
Query: 23 GNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGGSSKKK 82
GN C+ N+ LQAL C PF + + E + R+ + LT S + KKK
Sbjct: 2 GNTCYSNSVLQALYFCRPFREKVLEYKARN-KRTKETLLTCLADLFY-----SIATQKKK 55
Query: 83 NISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDELLKLQG 142
S+ +P F A L+ + N + Q+DA EFL+F+++ +++
Sbjct: 56 VGSI-------APKKFIARLRKEKEEFDNYM-----QQDAHEFLNFLINHINE------- 96
Query: 143 ESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKA-QG 201
+ LAE + + G K + P+ + +IF G L S +
Sbjct: 97 ------------IILAERTQNKPAGGKCGAGDAAGSPPEPTWVHEIFQGILTSETRCLNC 144
Query: 202 NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVK 260
S+ + F L +D+ +I LR FS E L + + A+K ++
Sbjct: 145 ETVSSKDEDFFDLQVDVDQNT--SITHCLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMR 202
Query: 261 IQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVL--GRDLLVTPSAEGRKYELVA 316
++ L IL LHL RF Y Q + K+ V FPL+L L D V P R Y+LVA
Sbjct: 203 VKKLPMILALHLKRFKYVEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPD---RLYDLVA 259
Query: 317 TVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQAYV 364
V H G P++GHY + + + WL FDD V I S + + Y+
Sbjct: 260 VVIHCGSGPNRGHYISIVKS-HGFWLLFDDDMVDKIDASTIEDFYGLTSDIQKSSETGYI 318
Query: 365 LFYK 368
LFY+
Sbjct: 319 LFYQ 322
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 151/362 (41%), Gaps = 65/362 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL------QELRTRDIPKAGYPTLTAFVGFVSDF 71
G+ N GN C+LN+TLQAL V L ++I G LT V F
Sbjct: 122 GMYNVGNTCYLNSTLQALFHVPALVNWLLSDPHHNSKCEQNILDGGGECLTCAVAKTLQF 181
Query: 72 D-TPSGGSSKKKNISVLDIGRPFSP-SMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
SGG+ K PF + + + + P +QEDA EFL ++
Sbjct: 182 SHQKSGGAIK-----------PFYVYNKLKLICRTMVPG---------QQEDAHEFLRYL 221
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
++ M L K+K+ S + ++ IF
Sbjct: 222 LEGMERAYLT-----------------------------KHKATKLDNYSKETTPINQIF 252
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG +++ VK Q S T Q F L +DI +T+++AL + + E L+
Sbjct: 253 GGYIRTEVKCLQCQHVSTTFQHFQDLLVDI--RKANTLDEALNSYFSREQLDNNDYKCEA 310
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
V A K ++ K+L + L RFSY K+ + + F + +G+ L P
Sbjct: 311 CKRRVPATKQFTLERPPKVLCVQLKRFSYLG---GKISRHIGFKQTIDMGQYLWREPGES 367
Query: 309 GRK--YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
++ Y+L++ VTH G + GHYTA A+ + Q+ FDD+ V I + VL AY++
Sbjct: 368 PKQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDSCVRPISLNNVLSTNAYIMI 427
Query: 367 YK 368
++
Sbjct: 428 FE 429
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 147/350 (42%), Gaps = 61/350 (17%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIP-KAGYPTLTAFVGFVSD-F 71
+GL N GN CFLNA LQ+L+ C PF L E + P +GY ++ A + F
Sbjct: 95 KGLRNLGNTCFLNAALQSLLHCPPFATALLEKIFSAASNCPSHSGYCSICAVEKTAQNVF 154
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
+ + S S +D+ R + + +NFTP RQ DA E++ F++D
Sbjct: 155 SSDTSFQS----YSPVDLVRN-----LKVLSRNFTPG---------RQADAHEYIRFLLD 196
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M+ LL + P+ K R Q + + + +IFGG
Sbjct: 197 DMNRILLGI---------------------------PRGKLCHDRQQE-MHTLVHEIFGG 228
Query: 192 QLKSVVKAQGNKASA-TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG-YRTSSTGN 249
+S V Q +S+ TV+PFL + LD+ E V T+ AL+ F+ PE L G R +
Sbjct: 229 CYESKVSCQNCGSSSDTVEPFLDVSLDL--EGVSTLAKALKGFTTPERLFGPNRYFCSQC 286
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS--TKLHKSVRFPLQLVLGRDLLVTPSA 307
A K + + + + I HL RF + + ++ F + L + + P
Sbjct: 287 KQRTDASKVFQFRRIPNVFIFHLKRFRLSKKENKFVSYDETFDFSPFIPLKGNSIRKPVY 346
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
Y L A + H G GHY A R N W DD + + KV
Sbjct: 347 ----YRLCAVIVHEGFSIHGGHYYAYVRNSNGIWYLKDDECTSRVVQQKV 392
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 143/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSIISVLSQQAYVLFYIQ 374
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 141/356 (39%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD-FDTPS 75
GL N GN C++NA+LQ L P +L + ++ + L ++ P
Sbjct: 81 GLQNMGNTCYMNASLQCLTYTPPLANYMLSQEHSQLCHRHKCCMLCTMEAHITRALHCP- 139
Query: 76 GGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
G PS +A+ F R +QEDA EFL FI+D M
Sbjct: 140 --------------GHVIQPS--QALAAGFH---------RGKQEDAHEFLMFIVDAMKK 174
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L + + D +T + + IFGG +S
Sbjct: 175 ACLPGHKQ--------------VDHDSEDT-----------------TLIHQIFGGCWRS 203
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVV 253
+K S T P+L + LDI +A +++ AL PE L G G
Sbjct: 204 QIKCLHCQGVSDTFDPYLDIALDI--QAAQSVKQALEQVVKPEELNGENAYHCGLCLQKA 261
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
A K+ + T +K+LIL L RFS KL K+V++P L + + + + Y
Sbjct: 262 PASKTFTLHTSAKVLILVLKRFS--DVTGNKLAKNVQYPECLDI-QPYMSQQNTGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFYIQ 374
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 152/366 (41%), Gaps = 63/366 (17%)
Query: 13 DLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDF 71
+L P GL+N GN CF N LQ L P V LL++ R+ + F +F
Sbjct: 164 ELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMHNDW-------CFFCEF 216
Query: 72 DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMD 131
T +S+ + PFSP + L N + G RQEDA EF+ + +D
Sbjct: 217 QTHVERASQSR--------FPFSPMNIISRLTNIGGTL-----GYGRQEDAHEFMRYAID 263
Query: 132 QMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGG 191
M L EE E + P T Q IFGG
Sbjct: 264 MMQSVCL--------------------EEFGGEKIVPPRSQETTLIQY--------IFGG 295
Query: 192 QLKSVVKAQ-GNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSST 247
L+S V+ N S + + L ++++ +AV ++E+ L F+A E L G Y+
Sbjct: 296 LLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAV-SLEECLDQFTAEEWLHGDNMYKCDRC 354
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
+ V A K + I IL + L R+ G G KL+K + FP L L + ++
Sbjct: 355 SD--YVKACKRLTIWRAPNILTIALKRYQGGRYG--KLNKRISFPATLDL--NPYMSEGG 408
Query: 308 EGRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYV 364
+G Y+L A + H + GHY + F W DD+ + ++ VL +AY+
Sbjct: 409 DGSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYM 468
Query: 365 LFYKQV 370
L Y ++
Sbjct: 469 LLYSRI 474
>gi|209876007|ref|XP_002139446.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
gi|209555052|gb|EEA05097.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
Length = 757
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 159/376 (42%), Gaps = 58/376 (15%)
Query: 17 RGLINSG-NLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD-FDTP 74
+GL+NSG N C+LN+ LQAL P + +R + K L + D T
Sbjct: 101 KGLLNSGWNTCYLNSILQALTYAPPILYDCLNMRHHKVCKYYRENLVCLLCMFEDHILTI 160
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
G+ K +NI+ R +P++ K I +DA EFL + ++ +H
Sbjct: 161 FSGNEKNQNIN--KSQRAIAPNILRCAQKLIWRKFRIGI-----MQDAHEFLRYFLEGLH 213
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ +L +D + + P + S + + +F G +
Sbjct: 214 KA---------------SVPKNLQSDDIFRKLNPIDTST---------TYIGQLFCGFFR 249
Query: 195 S-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNA 250
S +V S T PF+ + LDI V ++E+A +F+ E L G Y+
Sbjct: 250 SQIVCFSCLYMSNTYDPFMDIPLDIV--GVSSLENAFSIFTKKEYLRGANQYKCPKCEKK 307
Query: 251 GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDL--------- 301
A K V I+ L +L + L RFS+ G+ K +KS+++ L + +
Sbjct: 308 S--DASKEVLIEKLPPLLTIQLKRFSFIGHGNRKPYKSIKYNEVLDMSSYMTTKNTCNSQ 365
Query: 302 LVTP------SAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
+ TP + Y+L + V H G S GHY A+ N+QW F+D +V +S
Sbjct: 366 VYTPDNSLDTCRQSFIYDLWSVVCHSGGSLSGGHYYTYAKGLNNQWYCFNDETVRISKSS 425
Query: 356 KVLHDQ--AYVLFYKQ 369
+VL + AY+LFY Q
Sbjct: 426 EVLSETIGAYLLFYAQ 441
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 144/356 (40%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-KYE 313
A K++ + T +K+LIL L RFS K+ K+V++P L L ++ + G Y
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIDKNVQYPE--CLDMKLYMSQTNSGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 159/382 (41%), Gaps = 86/382 (22%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQE------LRTRDIPKAGYPTLTAFVGF---- 67
GL N GN C++N+ +Q+L+ P L L +P+ + A F
Sbjct: 127 GLHNRGNTCYMNSVMQSLLHTPPLATALLTQSAPTLLGRYGVPRTQKQAVKAANSFNALT 186
Query: 68 -VSDF--DTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQ 123
+ DF SG S+ SP+ F + L+ F + RP RQEDA
Sbjct: 187 EMKDFFAHAYSGASA-------------VSPTAFVSNLRKFARPL------RPGRQEDAH 227
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
E+L +++ LQ T G + + P + T +
Sbjct: 228 EYLRLLLE-------ALQQACTCFAGKD--------------IKPNDPILST-------T 259
Query: 184 ALSDIFGGQLKSVVKAQGNK-ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EG 241
+ IFGG+L+S V + S T P L L LD+ + +HT++ AL F+A E L +
Sbjct: 260 LIQRIFGGRLRSRVTCYSCRHNSDTYDPMLDLSLDV-RKGIHTVKQALDAFTAAEALADK 318
Query: 242 YRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS-YGSQGSTKLHKSVRFPLQLVLGR- 299
Y+ V A K I +L +HL RF +G+ K++K + + +L LGR
Sbjct: 319 YQCDHCQRR--VEATKRFSIDQAPMVLTVHLKRFGIFGN----KINKPISYSDRLHLGRY 372
Query: 300 ----------DLLVTPS----AEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFD 345
D+ P ++Y L A V H+G P+ GHY A R + QWL D
Sbjct: 373 MSERDKGLGADVEDEPDLGTLGAAQQYRLFAIVHHYGSGPNVGHYVASVRSADGQWLRMD 432
Query: 346 DASVTAIGTSKVLHDQAYVLFY 367
D+ V+ + + AY+LFY
Sbjct: 433 DSFVSKLPQCPLDDPSAYLLFY 454
>gi|50305101|ref|XP_452509.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641642|emb|CAH01360.1| KLLA0C06974p [Kluyveromyces lactis]
Length = 446
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 155/361 (42%), Gaps = 60/361 (16%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLL---QELRTRDIPKAGYPTLTAFVGFVSDFDT 73
+GL+N G+ CF+++ +Q ++ FV+ L + DI A DF
Sbjct: 133 QGLVNMGSTCFMSSIIQTIIHNPYFVEDLLSHKHCNNCDIKSGTKCVSCALDEIACDFYG 192
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
G+ K ++S + F L + + + + + G Q+DA E+ F+++Q+
Sbjct: 193 NGPGTGKSSSVS-----KGF------VNLLSASWHINHHLVGSS-QQDAHEYWQFLLNQL 240
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H + ++ G S + P + R IF G L
Sbjct: 241 HTDHARVFGSSKA---------------------PDCQCITHR-----------IFQGYL 268
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYR---TSSTGN 249
K+ ++ Q + T+ P + L L+I + +ED L F E L + S N
Sbjct: 269 KNTLQCSQCGFSKTTIDPIMDLSLEIKNNP--KLEDCLDHFQREETLTDFHYECQSCKQN 326
Query: 250 AGVVTAKKSVKIQTLSKILILHLMRFSYGSQG-STKLHKSVRFPLQLVLGRDLLVTPSAE 308
GVV K + + +L++ L RF + G S KL+ V+FPL L L L
Sbjct: 327 QGVV---KQLTLHKAPNVLVIQLKRFEHQLNGQSAKLNDRVQFPLHLNLKPHLFQIEDEY 383
Query: 309 --GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y+L+ V+H G +GHYT ++ + QW F+D+ VT++ +VL QAY+LF
Sbjct: 384 IPNIAYDLLNVVSHQGT-VDQGHYTTVSKTEDGQWFKFNDSVVTSVTEEQVLEQQAYLLF 442
Query: 367 Y 367
Y
Sbjct: 443 Y 443
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,524,038,728
Number of Sequences: 23463169
Number of extensions: 218942463
Number of successful extensions: 681483
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2299
Number of HSP's successfully gapped in prelim test: 4498
Number of HSP's that attempted gapping in prelim test: 663193
Number of HSP's gapped (non-prelim): 14626
length of query: 370
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 226
effective length of database: 8,980,499,031
effective search space: 2029592781006
effective search space used: 2029592781006
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)