BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017509
(370 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FPS3|UBP24_ARATH Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana
GN=UBP24 PE=1 SV=1
Length = 551
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 263/372 (70%), Positives = 305/372 (81%), Gaps = 3/372 (0%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPT 60
+K E V VKD PRGLIN+GNLCFLNATLQAL+SCSPFVQLLQ+++ +DIPKA PT
Sbjct: 181 LKVPTESVPPVKDFTPRGLINAGNLCFLNATLQALLSCSPFVQLLQKIQLQDIPKADSPT 240
Query: 61 LTAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQE 120
L AF F+S+ D PS SS + N++V++ GRPF P+MFE VL+NFTPDV N++SGRPRQE
Sbjct: 241 LAAFSEFISELDVPSS-SSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQE 299
Query: 121 DAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED--EWETVGPKNKSAVTRTQ 178
DAQEFLSFIMDQMHDELLKL+ +S + + ++++S A +D EWETVGPKNKSAVTRTQ
Sbjct: 300 DAQEFLSFIMDQMHDELLKLKEQSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQ 359
Query: 179 SFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPEN 238
SF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+
Sbjct: 360 SFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQED 419
Query: 239 LEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLG 298
LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L
Sbjct: 420 LEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLN 479
Query: 299 RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL 358
R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDDASVT IGT VL
Sbjct: 480 RSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL 539
Query: 359 HDQAYVLFYKQV 370
HDQAYVLFYKQV
Sbjct: 540 HDQAYVLFYKQV 551
>sp|Q7ZXR7|UB10B_XENLA Ubiquitin carboxyl-terminal hydrolase 10-B OS=Xenopus laevis
GN=usp10-b PE=2 SV=1
Length = 805
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 58 YPTLTAFVGFVSDF-DTPSGGSSKK----KNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F + P +K+ K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKVIKDIRPGAPFEPTYIYRLLTVFK----SS 521
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 159
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDQIHINNCPNPVSGVEEVNKEEQE 581
Query: 160 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 217
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 278 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 330
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEVSKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 331 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
T D + WL DD SV I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQSVKVINQYQVVKQTVERTAYLLYYRRV 802
>sp|Q2NL57|UB10A_XENLA Ubiquitin carboxyl-terminal hydrolase 10-A OS=Xenopus laevis
GN=usp10-a PE=2 SV=1
Length = 791
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 222/406 (54%), Gaps = 49/406 (12%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRT---RDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 396 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQKPCTS 451
Query: 58 YPTLTAFVGFVSDFDT----PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPN 111
P + +FV +++F P + + + V DI G PF P+ +L F +
Sbjct: 452 TPMIDSFVRLMNEFTNMPILPKAKQAPGEKV-VRDIRPGAPFEPAYIYRLLTVFK----S 506
Query: 112 SISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------ 159
S+S + RQEDA+E+L FI++ +H+E+L L Q + IN + + E
Sbjct: 507 SLSEKGRQEDAEEYLGFILNGLHEEMLALKKLLLPQNDKIHINNGPDPVFATEEVNKEEQ 566
Query: 160 ---EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
++EWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 567 EGSDEEWEQVGPRNKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQL 626
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF
Sbjct: 627 DIQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFV 683
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
+ + G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GH
Sbjct: 684 FEKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGH 742
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 743 YTTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 788
>sp|Q6DIJ4|UBP10_XENTR Ubiquitin carboxyl-terminal hydrolase 10 OS=Xenopus tropicalis
GN=usp10 PE=2 SV=1
Length = 805
Score = 235 bits (600), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 143/405 (35%), Positives = 223/405 (55%), Gaps = 47/405 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 410 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPVYTKAQRPCTS 465
Query: 58 YPTLTAFVGFVSDF-DTP----SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F + P + +S +K I + G PF P+ +L F +S
Sbjct: 466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIYRLLTVFK----SS 521
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAE------- 159
+S + RQEDA+E+L FI++ +H+E+L L Q + IN + E
Sbjct: 522 LSEKGRQEDAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQE 581
Query: 160 --EDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLD 217
++EWE VGP++KS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L LD
Sbjct: 582 GSDEEWEQVGPRHKSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKESATLQPFFTLQLD 641
Query: 218 IYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY 277
I SE + T++DAL A E+++GY T + + + V ++ L +L+LHL RF +
Sbjct: 642 IQSEKIRTVQDALESLVARESVQGYTTKTKQEVEIC---RRVTLEELPPVLVLHLKRFVF 698
Query: 278 -GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHY 330
+ G KL K++ +P+ L + +DLL +P + R Y L A V HHG + GHY
Sbjct: 699 EKTGGCQKLIKNIEYPVDLEISKDLL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGGHY 757
Query: 331 TADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
T D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 758 TTDVFQIGLNGWLRIDDQTVKVINQYQVVKQTVERTAYLLYYRRV 802
>sp|Q5ZJN4|UBP10_CHICK Ubiquitin carboxyl-terminal hydrolase 10 OS=Gallus gallus GN=USP10
PE=2 SV=1
Length = 785
Score = 229 bits (584), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/406 (35%), Positives = 218/406 (53%), Gaps = 48/406 (11%)
Query: 1 MKAINEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAG 57
+K +++PV L PRGLIN GN C++NATLQAL++C P L++ + P
Sbjct: 389 VKLVHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKSIPMYSKSQRPCTS 444
Query: 58 YPTLTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNS 112
P + +FV +++F P + V DI G F P+ +L + +S
Sbjct: 445 TPMIDSFVRLMNEFTNMPVPPKAKQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSS 500
Query: 113 ISGRPRQEDAQEFLSFIMDQMHDELLKLQ------GESTSI-NGANTALV---------S 156
+S + RQEDA+E+L FI++ +H+E+L L+ E S+ NG V
Sbjct: 501 LSEKGRQEDAEEYLGFILNGLHEEMLTLKKLLSPHNEKLSVSNGPEVQTVREEEEQDEQG 560
Query: 157 LAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHL 216
EDEWE VGP+NKS+VTR F+ + ++DIFGG ++SVV Q +K SAT+QPF L L
Sbjct: 561 EGSEDEWEQVGPRNKSSVTRQADFVQTPITDIFGGHIRSVVYQQSSKESATLQPFFTLQL 620
Query: 217 DIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFS 276
DI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF
Sbjct: 621 DIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEELPPVLVLHLKRFV 677
Query: 277 Y-GSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGH 329
Y + G KL K++ +P+ L + ++LL +P + R Y L A V HHG + H
Sbjct: 678 YEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKSKIFKGQRTYRLFAVVYHHGNSATGDH 736
Query: 330 YTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
YT D + WL DD +V I +V+ AY+L+Y++V
Sbjct: 737 YTTDVFQIGLNGWLRIDDQAVKVINQYQVVKPSAERTAYLLYYRRV 782
>sp|Q3KR59|UBP10_RAT Ubiquitin carboxyl-terminal hydrolase 10 OS=Rattus norvegicus
GN=Usp10 PE=2 SV=1
Length = 794
Score = 228 bits (582), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 216/392 (55%), Gaps = 43/392 (10%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPTLTAFVGFVSD 70
L PRGLIN GN C++NATLQAL++C P L++ L ++ P P + +FV +++
Sbjct: 408 LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPMIDSFVRLMNE 467
Query: 71 FDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEF 125
F P + V DI G F P+ +L + +S+S + RQEDA+E+
Sbjct: 468 FTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSEKGRQEDAEEY 523
Query: 126 LSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------EDEWETVGPKN 170
L FI++ +H+E+L L+ E S+ NG + L+ E EDEWE VGPKN
Sbjct: 524 LGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPGSHLIEDEELEDTGEGSEDEWEQVGPKN 583
Query: 171 KSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDAL 230
K++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL
Sbjct: 584 KTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDAL 643
Query: 231 RLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GSQGSTKLHKSV 289
A E+++GY T + V + V ++ L +L+LHL RF Y + G KL K++
Sbjct: 644 ESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNI 700
Query: 290 RFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWL 342
+P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL
Sbjct: 701 EYPVDLEISRELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWL 759
Query: 343 HFDDASVTAIGTSKVLHDQ----AYVLFYKQV 370
DD +V I +V+ AY+L+Y++V
Sbjct: 760 RIDDQTVKVINQYQVVRPSADRTAYLLYYRRV 791
>sp|P52479|UBP10_MOUSE Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10
PE=1 SV=3
Length = 792
Score = 222 bits (566), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 145/402 (36%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 400 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 455
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 456 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 511
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG------ESTSI-NGANTALVSLAE--------E 160
+ RQEDA+E+L FI++ +H+E+L L+ E S+ NG + L+ E E
Sbjct: 512 KGRQEDAEEYLGFILNGLHEEMLSLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSE 571
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S
Sbjct: 572 DEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQS 631
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 632 DKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKT 688
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D
Sbjct: 689 GGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTD 747
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 748 VFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
>sp|Q14694|UBP10_HUMAN Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10
PE=1 SV=2
Length = 798
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/402 (35%), Positives = 216/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 406 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYSKVQRPCTSTPM 461
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L +S+S
Sbjct: 462 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTVNK----SSLSE 517
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ ++ S+N E
Sbjct: 518 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNEEEQEEQGEGSE 577
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 578 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 637
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 638 DKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 694
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 695 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTD 753
Query: 334 ARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 370
+ WL DD +V I +V+ AY+L+Y++V
Sbjct: 754 VFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
>sp|A5PJS6|UBP10_BOVIN Ubiquitin carboxyl-terminal hydrolase 10 OS=Bos taurus GN=USP10
PE=2 SV=1
Length = 800
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 215/402 (53%), Gaps = 47/402 (11%)
Query: 4 INEPVKSVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQ--ELRTR-DIPKAGYPT 60
I++PV L PRGLIN GN C++NATLQAL++C P L++ L ++ P P
Sbjct: 408 IHKPVS----LQPRGLINKGNWCYINATLQALVACPPMYHLMKLIPLYSKVQRPCTSTPM 463
Query: 61 LTAFVGFVSDFDT---PSGGSSKKKNISVLDI--GRPFSPSMFEAVLKNFTPDVPNSISG 115
+ +FV +++F P + V DI G F P+ +L + +S+S
Sbjct: 464 IDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLLTV----IKSSLSE 519
Query: 116 RPRQEDAQEFLSFIMDQMHDELLKLQG---------------ESTSINGANTALVSLAEE 160
+ RQEDA+E+L FI++ +H+E+L L+ +S S+N E
Sbjct: 520 KGRQEDAEEYLGFILNGLHEEMLNLKKLLSPNNDKLTISNGPKSHSVNEDEQEEPGEGSE 579
Query: 161 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYS 220
DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S
Sbjct: 580 DEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQS 639
Query: 221 EAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSY-GS 279
+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y +
Sbjct: 640 DKIRTVQDALESLVARESVQGYTTKTRQE---VEISRRVTLEKLPPVLVLHLKRFVYEKT 696
Query: 280 QGSTKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTAD 333
G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D
Sbjct: 697 GGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGSSATGGHYTTD 755
Query: 334 ARYFN-DQWLHFDDASVTAIGTSK----VLHDQAYVLFYKQV 370
+ WL DD +V + + AY+L+Y++V
Sbjct: 756 VFQIGLNGWLRIDDQTVKVVSQQQVVRPAAERTAYLLYYRRV 797
>sp|O96612|UBPB_DICDI Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1
Length = 451
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 156/269 (57%), Gaps = 18/269 (6%)
Query: 111 NSISGRPRQEDAQEFLSFIMDQMHDELLKL------QGESTSINGANTALVSLAEEDEWE 164
NS+ Q+DAQEFL F++D +H+E L L E +T++V +D WE
Sbjct: 191 NSLPQTICQQDAQEFLVFLLDLIHEEFLTLIKDIDIPKEDDKSTPTSTSIV----DDNWE 246
Query: 165 TVGPKNKSAV-TRTQSFLP-SALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEA 222
VG K K+A+ T +Q LP + +S IF G L+S G+K S TV+PF LHLDI E
Sbjct: 247 VVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEE 306
Query: 223 VHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS 282
++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S
Sbjct: 307 INSLEDALKFFMKPEIIEGY-TCSTKKIE-ISASKSWSFESLPRILIVHFKRFAFESDTS 364
Query: 283 TKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFND-QW 341
KL K +RFP QL L + +KY L + V+HHGR S+GHYT D QW
Sbjct: 365 KKLDKLIRFPTQLSLST---ASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQW 421
Query: 342 LHFDDASVTAIGTSKVLHDQAYVLFYKQV 370
+ +DD++ T + VL+ +AY+L Y+ V
Sbjct: 422 IRYDDSTFTEVKEQDVLNREAYLLLYQLV 450
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 17 RGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAG-YPTLTAFVGFVSDF 71
RGLIN+ N CF+N LQ+L C F+++++ L D+ G YPTL +F F +++
Sbjct: 19 RGLINTSNTCFMNVILQSLTGCQLFLRVIKNL--SDLEDLGKYPTLHSFNQFYTEY 72
>sp|O94269|UBP3_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp3 PE=3 SV=1
Length = 512
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/407 (31%), Positives = 197/407 (48%), Gaps = 77/407 (18%)
Query: 12 KDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIP---KAGYPTLTAFVGFV 68
+ + PRG IN+GN+CF+N+ LQALM C PF LL+++ R +P + P + +
Sbjct: 128 RPIQPRGFINTGNICFMNSILQALMYCVPFYNLLKQI-NRMVPYNFERTTPLIESLTMLS 186
Query: 69 SDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSIS-GRPR--------Q 119
DF R +S F+ + P+V S + G PR Q
Sbjct: 187 RDF-------------------REYS-EKFDLQGDSILPEVVYSATKGNPRFEMLQTGEQ 226
Query: 120 EDAQEFLSFIMDQMHDELLK------LQGESTS-------INGANTALVSL-----AEED 161
EDA+EFL+ +D++H+E ++ L+ + + NG + L S E
Sbjct: 227 EDAEEFLNLFLDELHEEFVRERRHYLLKNDERNPKSDIKISNGIKSGLDSFDDQSSVEAS 286
Query: 162 EWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSE 221
W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E
Sbjct: 287 GWTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAE 346
Query: 222 AVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQG 281
+H++ DAL +APE L + +S G VTA K + I++L +LILHL RF Y + G
Sbjct: 347 DIHSVIDALEHMTAPEILPEWHSS----KGNVTATKQMYIESLPPVLILHLKRFFYEASG 402
Query: 282 ST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYF 337
T K +K + +P +L + +++ +PS G +Y+L A V HHG S GHYT D +
Sbjct: 403 GTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQL 461
Query: 338 NDQ-WLHFDDASVTAIGTSKVLHDQ----------------AYVLFY 367
+ W DD + + V + + AY+LFY
Sbjct: 462 DKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFY 508
>sp|Q01477|UBP3_YEAST Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP3 PE=1 SV=1
Length = 912
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 200/461 (43%), Gaps = 106/461 (22%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQELRTRD----IPKAGYPTLTAFVG 66
V ++PRG+IN N+CF+++ LQ L+ C PF+ ++ L TR+ + + L A +
Sbjct: 454 VHSIIPRGIINRANICFMSSVLQVLLYCKPFIDVINVLSTRNTNSRVGTSSCKLLDACLT 513
Query: 67 FVSDFDTPS------GGSSKKKNISVLDIGRPFSPSMFE--AVLKNFTPD-VPNSISGRP 117
FD + + + + D + F+ A PD ++S P
Sbjct: 514 MYKQFDKETYEKKFLENADDAEKTTESDAKKSSKSKSFQHCATADAVKPDEFYKTLSTIP 573
Query: 118 R--------QEDAQEFLSFIMDQMHDELLK-------------LQ--------------- 141
+ QEDA+EFL+ ++DQ+H+EL+ LQ
Sbjct: 574 KFKDLQWGHQEDAEEFLTHLLDQLHEELISAIDGLTDNEIQNMLQSINDEQLKVFFIRNL 633
Query: 142 ---GESTSINGANTALVSL-----------AEEDEWETV------GPKNKSAVTRTQSFL 181
G++ I A+ L L EE+ W V G K K+A RT +
Sbjct: 634 SRYGKAEFIKNASPRLKELIEKYGVINDDSTEENGWHEVSGSSKRGKKTKTAAKRTVEIV 693
Query: 182 PSALSDIFGGQLKSVVKAQGNKASA--TVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL 239
PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L
Sbjct: 694 PSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELL 753
Query: 240 EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST---------------K 284
SS+GN V AKK I L ++L++ RFS+ + + K
Sbjct: 754 P--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEK 809
Query: 285 LHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF 337
+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD +
Sbjct: 810 IRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHS 869
Query: 338 -NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 369
+++W DD ++T + VL AY+L Y++
Sbjct: 870 EHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
>sp|Q9Y6I4|UBP3_HUMAN Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens GN=USP3
PE=1 SV=2
Length = 520
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 176/387 (45%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G + N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDN---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K+L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V FPL+ + + L+ P G + Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVHHGSGVGSGHYTAYATH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V+ +AY+LFY
Sbjct: 482 WFHFNDSTVTLTDEETVVKAKAYILFY 508
>sp|Q91W36|UBP3_MOUSE Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus GN=Usp3
PE=2 SV=1
Length = 520
Score = 124 bits (310), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 174/387 (44%), Gaps = 59/387 (15%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCSPFVQLLQEL---RTRDIPKAGYPTLTAFVG 66
S + GL N GN CF+NA LQ+L + F +EL R+ AG T
Sbjct: 152 STTAICATGLRNLGNTCFMNAILQSLSNIEQFCCYFKELPAVELRNGKTAGRRT------ 205
Query: 67 FVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPD---------VPNSISGRP 117
+ T S G S N+S+++ R ++++ F+P+ +PN G
Sbjct: 206 ----YHTRSQGDS---NVSLVEEFRKTLCALWQGSQTAFSPESLFYVVWKIMPN-FRGY- 256
Query: 118 RQEDAQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRT 177
+Q+DA EF+ +++D +H L+LQG NG + + + L E T+ NK +
Sbjct: 257 QQQDAHEFMRYLLDHLH---LELQG---GFNGVSRSAI-LQENS---TLSASNKCCINGA 306
Query: 178 QSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPFLLLHLDIYSE------------AVH 224
+ + + IFGG L++ V S PFL L LDI S+ V
Sbjct: 307 STVVTA----IFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVC 362
Query: 225 TIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++ D LR F+ E L E + K IQ L K L LHL RF + +
Sbjct: 363 SLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRFHWTAYLRN 422
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEGRK---YELVATVTHHGRDPSKGHYTADARYFNDQ 340
K+ V+FPL+ + + L+ P G Y+L A V HHG GHYTA A + +
Sbjct: 423 KVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVHHGSGVGSGHYTAYAVH-EGR 481
Query: 341 WLHFDDASVTAIGTSKVLHDQAYVLFY 367
W HF+D++VT V +AY+LFY
Sbjct: 482 WFHFNDSTVTVTDEETVGKAKAYILFY 508
>sp|O60139|UBP4_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp4 PE=1 SV=2
Length = 593
Score = 122 bits (305), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 171/395 (43%), Gaps = 77/395 (19%)
Query: 10 SVKDLLPRGLINSGNLCFLNATLQALMSCS----PFVQ---LLQELRTRDIPKAGYPTLT 62
S ++ P GL N GN C++N LQ L +C P +Q LLQ + T++ G +
Sbjct: 220 SYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNINTKNPLGTGGKITS 279
Query: 63 AFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDA 122
AF + G R SP F ++++ D SI G Q DA
Sbjct: 280 AFFSLLQSVLLNHG-------------QRSISPRNFLEIVQSLNRDF--SIDG---QCDA 321
Query: 123 QEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEED---------------EWETVG 167
QEFL+F +D++H++L + N + + + L E+ EW
Sbjct: 322 QEFLNFFLDKLHEDL--------NSNASRSPIAPLTEDQLSAREELPLSHFSHIEWNLHL 373
Query: 168 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQ-GNKASATVQPF--LLLHLDIYSEAVH 224
NKS V F GQL S + + S T PF L + +D S V
Sbjct: 374 RSNKSIVVNN-----------FVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVV- 421
Query: 225 TIEDALRLFSAPENLEGYRTSSTGNAGVV-TAKKSVKIQTLSKILILHLMRFSYGSQGST 283
++++ L FSAPE L+G+ V +AKK + I L + LI+ + RF G
Sbjct: 422 SLQECLLKFSAPELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKISVMGRK 481
Query: 284 KLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYF 337
K+ + LQ + +LV PS + Y L A + H+G+ GHY +D F
Sbjct: 482 KIDTPLGLSLQ--IPSKMLVPPSFQSGIGYIPSNYNLFAFICHYGQ-LENGHYISDV-LF 537
Query: 338 NDQWLHFDDASVTAIGTSKVLHDQ---AYVLFYKQ 369
N++W H DD+ V +G L + +Y+LFYK+
Sbjct: 538 NNEWCHIDDSIVRTVGGITDLREDFSSSYILFYKR 572
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 160/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ RD+ +S+F
Sbjct: 20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNS----RMRTALMSEF----- 70
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I +L P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 71 ----AKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 121
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H E+ ++ AN + +DE K++ R Q S +SD+F GQL
Sbjct: 122 HGEVNRVLVRPR----ANADTLDHLPDDE------KSRQMWRRYQEREDSRVSDLFVGQL 171
Query: 194 KS-VVKAQGNKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
KS + ++ S PF L L I Y E T+ D LRLF+ + L+G +
Sbjct: 172 KSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV--TLMDCLRLFTKEDVLDGDEKPTCC 229
Query: 249 NAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
T K IQ KIL+LHL RFS ++KL V FPL+ + R+ + S
Sbjct: 230 RCKARTRCTKKFSIQKFPKILVLHLKRFSEARIRASKLTTFVNFPLKDLDLRE-FASQSC 288
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA + + +W F+D+ VT + +S V AY+LF
Sbjct: 289 NHAVYNLYAVSNHSG-TTMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLF 347
Query: 367 YK 368
Y+
Sbjct: 348 YE 349
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 114 bits (286), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 163/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 326
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 327 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGY-----NQQDAQEFLRFLLDGL 377
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + L L +E+ K + + S + D+F GQL
Sbjct: 378 HNEVNRVAARP---KASPETLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 427
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 428 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDILDGDEKPTCC 485
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 486 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 544
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 545 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 603
Query: 367 YK 368
Y+
Sbjct: 604 YE 605
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 164/362 (45%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ G+ T +A + +F
Sbjct: 281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDL---GH-TSSAHTALMEEF----- 331
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 332 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 382
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ + +L L +E+ K + + S + D+F GQL
Sbjct: 383 HNEVNRVAARPKP---SPESLDHLPDEE-------KGRQMWRKYLEREDSRIGDLFVGQL 432
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 433 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 490
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K +Q KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 491 RCRARKRCIKKFSVQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 549
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 550 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 608
Query: 367 YK 368
Y+
Sbjct: 609 YE 610
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ A V +F
Sbjct: 268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGS----NAHTALVEEF----- 318
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 319 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 369
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ T +N + +DE K + + S + D+F GQL
Sbjct: 370 HNEVNRV----TLRPKSNPENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 419
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 420 KSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 477
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
G K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 478 RCRGRKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTTFVNFPLRDLDLRE-FASENT 536
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SVT + +S+V AY+LF
Sbjct: 537 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLF 595
Query: 367 YK 368
Y+
Sbjct: 596 YE 597
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 120/373 (32%), Positives = 166/373 (44%), Gaps = 51/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALVS-------LAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + +G AN + S L EE E N K + R S
Sbjct: 314 HLEINR-RGRRAPPILANGPVPSPPRRGGALLEEPELSDDDRANLMWKRYLERED----S 368
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 369 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEE 428
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 429 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRL 487
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 488 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 543
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 544 QVASSEGYVLFYQ 556
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1
SV=2
Length = 1080
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 153/357 (42%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 793
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + S Q+D+QE L F+MD +H
Sbjct: 794 IIMK-----ALWTGQYRYISPKDFKVTIGKINDQFAGS-----SQQDSQELLLFLMDGLH 843
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L L A E W+ N+S + +F GQ
Sbjct: 844 EDLNKADNRKRHKEENNEHLDDLQAAEHAWQKHKQLNESIIVA-----------LFQGQF 892
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ + S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 893 KSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 952
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 953 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKK 1012
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1013 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 118/372 (31%), Positives = 166/372 (44%), Gaps = 49/372 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYP-TLT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTAL------VSLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I ++ A +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASSPAPHPPRLGGALLEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFS-ASRGSIKKSSVGVDFPLQRLS 488
Query: 297 LGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSK 356
LG + A Y+L A H G GHYTA R W ++D+ V+ + ++
Sbjct: 489 LGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSENQ 544
Query: 357 VLHDQAYVLFYK 368
V + YVLFY+
Sbjct: 545 VASSEGYVLFYQ 556
>sp|Q9FPS9|UBP15_ARATH Ubiquitin carboxyl-terminal hydrolase 15 OS=Arabidopsis thaliana
GN=UBP15 PE=2 SV=2
Length = 924
Score = 109 bits (272), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 156/368 (42%), Gaps = 69/368 (18%)
Query: 11 VKDLLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVS 69
V DL PRGL+N GN C+ NA LQ+L P V LL+ +R + + V
Sbjct: 432 VFDLSPRGLVNCGNSCYANAVLQSLTCTKPLVAYLLRRSHSRSCSGKDWCLMCELEQHV- 490
Query: 70 DFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFI 129
+ + + G P S S + +++ + G QEDA EFL +
Sbjct: 491 --------------MMLRESGGPLSASRILSHMRSINCQI-----GDGSQEDAHEFLRLL 531
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+ M L+ G T ++ P+ + + + +F
Sbjct: 532 VASMQSICLERLGGETKVD-------------------PRLQET---------TLVQHMF 563
Query: 190 GGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTS 245
GG+L+S VK + + S + + L L+IY V +++DAL F+ PE+L+G YR S
Sbjct: 564 GGRLRSKVKCLRCDHESERYENIMDLTLEIYG-WVESLQDALTQFTRPEDLDGENMYRCS 622
Query: 246 STGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQL----VLGRDL 301
AG V A+K + I IL + L RF G G K++K + FP L + R
Sbjct: 623 RC--AGYVRARKELSIHEAPNILTIVLKRFQEGRYG--KINKCISFPEMLDMIPFMTRTG 678
Query: 302 LVTPSAEGRKYELVATVTHHG--RDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH 359
V P Y L A + H GHY + + W DD+ + + ++V+
Sbjct: 679 DVPP-----LYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMS 733
Query: 360 DQAYVLFY 367
+ AY+LFY
Sbjct: 734 EGAYMLFY 741
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1
SV=1
Length = 1118
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 156/357 (43%), Gaps = 35/357 (9%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLL-QELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++N+ LQ L + + DI ++ +G + G
Sbjct: 778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSN------LLGHKGEVAEEFG 831
Query: 77 GSSKKKNISVLDIG--RPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
K L G R SP F+ + + + +G Q+D+QE L F+MD +H
Sbjct: 832 IIMK-----ALWTGQYRYISPKDFKITIGK----INDQFAGY-SQQDSQELLLFLMDGLH 881
Query: 135 DELLKLQGESTSINGANTALVSL-AEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
++L K N L A E W+ N+S + +F GQ
Sbjct: 882 EDLNKADNRKRYKEENNDHLDDFKAAEHAWQKHKQLNESIIVA-----------LFQGQF 930
Query: 194 KSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAG 251
KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R +
Sbjct: 931 KSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRA 990
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+ K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +K
Sbjct: 991 RRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKK 1050
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+G GHYTA + Q W FDD V+ I S V AY+LFY
Sbjct: 1051 YNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 164/373 (43%), Gaps = 50/373 (13%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV-------SLAEEDEWETVGPKN---KSAVTRTQSFLPS 183
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGGALHEEPELSDDDRANLMWKRYLERED----S 369
Query: 184 ALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPEN 238
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E
Sbjct: 370 KIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEE 429
Query: 239 LEGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-L 295
LE T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 LESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRL 488
Query: 296 VLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTS 355
LG + A Y+L A H G GHYTA R W ++D+ V+ + +
Sbjct: 489 SLGD--FASDKAGSPVYQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVSEN 544
Query: 356 KVLHDQAYVLFYK 368
+V + YVLFY+
Sbjct: 545 QVASSEGYVLFYQ 557
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 166/375 (44%), Gaps = 55/375 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ--LLQELRTRDIPKAGYPT-LT-AFVGFVSDFDT 73
GL N GN CFLNA LQ L S P L ++ R +++P G LT AF +
Sbjct: 213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFR-QEVPGGGRAQELTEAFADVIGALWH 271
Query: 74 PSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
P D +P+ F AV + + P S SG Q+DAQEFL +M+++
Sbjct: 272 P-------------DSCEAVNPTRFRAVFQKYVP----SFSGY-SQQDAQEFLKLLMERL 313
Query: 134 HDELLKLQGESTSINGANTALV------SLAEEDEWETVGPKN---KSAVTRTQSFLPSA 184
H E+ + + I + +L EE E N K + R S
Sbjct: 314 HLEINRRGRRAPPILASGPVPSPPRRGGALHEEPELSDDDRANLMWKRYLERED----SK 369
Query: 185 LSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDI----YSEAVHTIEDALRLFSAPENL 239
+ D+F GQLKS +K Q S T + F L L I ++ ++ D LF+ E L
Sbjct: 370 IVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSLFTKEEEL 429
Query: 240 EGYRTSSTGNAGVVT-AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHK-SVRFPLQ-LV 296
E T + K + +Q +IL+LHL RFS S+GS K V FPLQ L
Sbjct: 430 ESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRFST-SRGSIKKSSVGVDFPLQRLS 488
Query: 297 LG---RDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIG 353
LG D + +P Y+L A H G GHYTA R W ++D+ V+ +
Sbjct: 489 LGDFASDKVGSPV-----YQLYALCNHSG-SVHYGHYTALCR-CQTGWHVYNDSRVSPVS 541
Query: 354 TSKVLHDQAYVLFYK 368
++V + YVLFY+
Sbjct: 542 ENQVASSEGYVLFYQ 556
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 161/362 (44%), Gaps = 43/362 (11%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF+N+ LQ L + LQ L RD+ + A + +F
Sbjct: 269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSS----RAHTALMEEF----- 319
Query: 77 GSSKKKNISVLDIGRP---FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQM 133
K I + P SPS F+ ++ + P Q+DAQEFL F++D +
Sbjct: 320 ----AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGY-----NQQDAQEFLRFLLDGL 370
Query: 134 HDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQL 193
H+E+ ++ S NT + +DE K + + S + D+F GQL
Sbjct: 371 HNEVNRVIARPKS----NTENLDHLPDDE------KGRQMWRKYLEREDSRIGDLFVGQL 420
Query: 194 KSVVKAQGNKASATV-QPFLLLHLDI----YSEAVHTIEDALRLFSAPENLEG-YRTSST 247
KS + +TV PF L L I Y E T+ D +RLF+ + L+G + +
Sbjct: 421 KSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV--TLMDCMRLFTKEDVLDGDEKPTCC 478
Query: 248 GNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
K IQ KIL+LHL RFS ++KL V FPL+ + R+ + +
Sbjct: 479 RCRARKRCIKKFSIQRFPKILVLHLKRFSESRIRTSKLTAFVNFPLRDLDLRE-FASENT 537
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARY-FNDQWLHFDDASVTAIGTSKVLHDQAYVLF 366
Y L A H G GHYTA R +W F+D+SV+ + +S+V AY+LF
Sbjct: 538 NHAVYNLYAVSNHSGTT-MGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLF 596
Query: 367 YK 368
Y+
Sbjct: 597 YE 598
>sp|C0HB46|UBP12_SALSA Ubiquitin carboxyl-terminal hydrolase 12 OS=Salmo salar GN=usp12
PE=2 SV=1
Length = 372
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 159/368 (43%), Gaps = 55/368 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSA-LSDIFGGQLKSV 196
L+ + + NG A SL ++ P PS + +IF G L +
Sbjct: 140 LQEERKQDKTNG-RLANGSLDSQNHNSNAPP-------------PSTWVHEIFQGTLTNE 185
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVT 254
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 186 TRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQE 243
Query: 255 AKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R Y
Sbjct: 244 AHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RLY 302
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------D 360
+LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 303 DLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNSE 361
Query: 361 QAYVLFYK 368
Y+LFY+
Sbjct: 362 SGYILFYQ 369
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 104 bits (260), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 159/369 (43%), Gaps = 58/369 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L R P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKI--LAYRSQPRRKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++K+ + V+ P F L+ N + Q+DA EFL+++++ + D L
Sbjct: 92 ANQKRKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-L 139
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG AN L S N S T + + +IF G L +
Sbjct: 140 LQEERKQDKQNGKLANGTLDS-----------QNNNSTPPST-----TWVHEIFQGTLTN 183
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVV 253
+ S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 184 ETRCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQ 241
Query: 254 TAKKSVKIQTLSKILILHLMRFSYGS--QGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
A K ++++ L IL LHL RF Y Q TKL V FPL+L L + E R
Sbjct: 242 EAHKRMRVKKLPMILALHLKRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPE-RL 300
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------ 359
Y+LVA V H G P++GHY A + +D WL FDD V I +
Sbjct: 301 YDLVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNS 359
Query: 360 DQAYVLFYK 368
+ Y+LFY+
Sbjct: 360 ESGYILFYQ 368
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 160/374 (42%), Gaps = 65/374 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKVQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD-- 135
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTVADIL 136
Query: 136 -ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
E K + ++ + TA+ + +T +NK P+ + +IF G L
Sbjct: 137 QEERKQEKQNGRLKNNGTAIAT-------DTEPEQNKID--------PTWVHEIFQGTLT 181
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGV 252
+ + S+ + FL L +D+ E +I LR FS E L Y+
Sbjct: 182 NETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEYKYYCEMCCSK 239
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG- 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S +
Sbjct: 240 QEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSGDAV 294
Query: 310 ---RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------- 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 295 NLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTSD 353
Query: 360 -----DQAYVLFYK 368
+ Y+LFY+
Sbjct: 354 ISKNSESGYILFYQ 367
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLRNGDVDNEDNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>sp|O24454|UBP3_ARATH Ubiquitin carboxyl-terminal hydrolase 3 OS=Arabidopsis thaliana
GN=UBP3 PE=1 SV=1
Length = 371
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 169/385 (43%), Gaps = 50/385 (12%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRT--RDIPKAGYPTL 61
K++ D P G N GN C+ N+ LQAL C PF + L E T + + A +
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLM 69
Query: 62 TAFVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQED 121
T S SS+KK V+ +P F LK N + +D
Sbjct: 70 TCLADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQD 112
Query: 122 AQEFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFL 181
A EFL+++++++ D +L+ + ++T T+ S E+ P+ V + +
Sbjct: 113 AHEFLNYLLNEVVD-ILEKEAKATKTE-HETSSSSSPEKIANGLKVPQANGVVHKEP--I 168
Query: 182 PSALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLE 240
+ + +IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 169 VTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLH 226
Query: 241 GY-RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVL 297
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 227 AEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKL 286
Query: 298 GRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKV 357
V P A+ +Y L A V H G P+ GHY + + N WL FDD +V I S V
Sbjct: 287 SNT--VEPYAD-VEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIEESAV 342
Query: 358 L------------HDQAYVLFYKQV 370
D Y+LFY+ +
Sbjct: 343 QTFFGSSQEYSSNTDHGYILFYESL 367
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 155/367 (42%), Gaps = 56/367 (15%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG P + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR----------------LPNGNIDSENNSTPDPTWVHEIFQGTLTNET 183
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 184 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 241
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 242 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 300
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 301 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 359
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 360 GYILFYQ 366
>sp|O75317|UBP12_HUMAN Ubiquitin carboxyl-terminal hydrolase 12 OS=Homo sapiens GN=USP12
PE=1 SV=2
Length = 370
Score = 102 bits (255), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 159/367 (43%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKESLLTCLA------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG L + ++E P P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNG---RLPNGNIDNENNNSTPD------------PTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 149/362 (41%), Gaps = 57/362 (15%)
Query: 13 DLLPR--GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSD 70
+++P GL+N GN CF+N+ LQ + P VQ L + + L V+
Sbjct: 119 NIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSCRMNACVLCRMEQHVAR 178
Query: 71 FDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRP-RQEDAQEFLSFI 129
P+ G+ + F PS +++LK + RP RQEDA EF+ ++
Sbjct: 179 -AYPNKGTKR---------ASAFKPSGIQSMLKVISSHF------RPYRQEDAHEFMRYL 222
Query: 130 MDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIF 189
+D L+ KN +R S + IF
Sbjct: 223 VDAWQKSCLQ---------------------------NHKNLDHPSRETS----VVHRIF 251
Query: 190 GGQLKS-VVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTG 248
GG L+ ++ + K S T Q L L +D ++ D+L+ F E L
Sbjct: 252 GGYLRQQILCSVCKKPSNTYQALLDLSVDAKGS---SLADSLKHFVHAEKLTKQNKYRCE 308
Query: 249 NAG-VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSA 307
N +V A K + I IL +H RF++ S+K+ K + +P LG + P+
Sbjct: 309 NCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLG-PYMSDPNC 367
Query: 308 EGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
YEL+ + H G GHY + + N WL FDD V+ +VL+ QAY+L Y
Sbjct: 368 SCW-YELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQY 426
Query: 368 KQ 369
K+
Sbjct: 427 KR 428
>sp|Q5M981|UB12B_XENLA Ubiquitin carboxyl-terminal hydrolase 12-B OS=Xenopus laevis
GN=usp12-b PE=2 SV=2
Length = 370
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNNTPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>sp|Q52KZ6|UB12A_XENLA Ubiquitin carboxyl-terminal hydrolase 12-A OS=Xenopus laevis
GN=usp12-a PE=2 SV=1
Length = 370
Score = 102 bits (253), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 156/367 (42%), Gaps = 55/367 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + L + P+ LT D
Sbjct: 40 GLVNFGNTCYCNSVLQALYFCRPFREKV--LAYKSQPRKKENLLTCLS------DLFHSI 91
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F L+ N + Q+DA EFL+++++ + D +
Sbjct: 92 ATQKKKVGVI------PPKKFITRLRK-----ENELFDNYMQQDAHEFLNYLLNTIAD-I 139
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVV 197
L+ + + NG + N + P+ + +IF G L +
Sbjct: 140 LQEERKQEKQNGR---------------IPNGNIDNENNNSAPDPTWVHEIFQGTLTNET 184
Query: 198 KA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTA 255
+ S+ + FL L +D+ E +I LR FS E L Y+ A
Sbjct: 185 RCLTCETISSKDEDFLDLSVDV--EQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEA 242
Query: 256 KKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYE 313
K +K++ L IL LHL RF Y Q TKL V FPL+L L + + R Y+
Sbjct: 243 HKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFPLELRLF-NTSGDATNPDRMYD 301
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------------DQ 361
LVA V H G P++GHY A + +D WL FDD V I + +
Sbjct: 302 LVAVVVHCGSGPNRGHYIAIVKS-HDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNSES 360
Query: 362 AYVLFYK 368
Y+LFY+
Sbjct: 361 GYILFYQ 367
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 101 bits (251), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 142/356 (39%), Gaps = 62/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQ-ELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CFLN+ LQ L P LQ + AG+ L A V
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVR------- 160
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++++ N GR +P + L+ + + N RQEDA E++ +++ MH
Sbjct: 161 -TARQAN------GRILAPKDLVSNLRCISRNFRNC-----RQEDAHEYMINLLECMHKC 208
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L S S + +LV IFGG L+S
Sbjct: 209 SLPSGVPSESSDAYRRSLVH------------------------------KIFGGSLRSQ 238
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG----YRTSSTGNAG 251
VK Q + S PFL L LDI +++ AL F+A E L+ Y+
Sbjct: 239 VKCEQCSHCSNKFDPFLDLSLDI--SKADSLQRALSRFTAVELLDNGAKVYQCERCKQK- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
V AKK + + +L +HL RF + S K+ + V F + + + + P K
Sbjct: 296 -VKAKKQLTVSKAPYVLTVHLKRFE--AHRSEKIDRKVDFTSAIDM-KPFVSGPHEGNLK 351
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L + H+GR GHY R + W DD V + V + +AY+LFY
Sbjct: 352 YTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 407
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 147/365 (40%), Gaps = 63/365 (17%)
Query: 14 LLPRGLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFD 72
+ P GL N GN CF N LQ L P V LL+ R+ + + L F +
Sbjct: 171 MAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRRNDWCFLCEFENHLD--- 227
Query: 73 TPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQ 132
+ N S PFSP + L N ++ G RQEDA E + F +D
Sbjct: 228 --------RANYSRF----PFSPMNIISRLPNIGGNL-----GYGRQEDAHELMRFAIDM 270
Query: 133 MHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQ 192
M L G E V P T Q IFGG
Sbjct: 271 MQSVCLDEFG--------------------GEKVVPPRAQETTLIQY--------IFGGL 302
Query: 193 LKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTG 248
L+S V+ + S + + L ++I+ +AV ++E+ L F+A E L+G Y+
Sbjct: 303 LQSQVQCTACSNVSDQYENMMDLTVEIHGDAV-SLEECLDQFTAKEWLQGDNLYKCDRCD 361
Query: 249 NAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE 308
+ V A K + I+ IL + L RF G G KL+K + FP LG ++ E
Sbjct: 362 D--YVKACKRLSIRCAPNILTIALKRFQGGRFG--KLNKRISFPETFDLGP--YMSGGGE 415
Query: 309 GRK-YELVATVTHHGRDPSK--GHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVL 365
G Y+L A + H + GHY + F W DD+ V + VL +AY+L
Sbjct: 416 GSDVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYML 475
Query: 366 FYKQV 370
Y +V
Sbjct: 476 LYSRV 480
>sp|A8MUK1|U17L5_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo
sapiens GN=USP17L5 PE=2 SV=2
Length = 530
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 145/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL + PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 160/383 (41%), Gaps = 51/383 (13%)
Query: 9 KSVKDLLPRG-----LINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTA 63
K++ D P G N GN C+ N+ LQAL C+PF + L E + A LT
Sbjct: 10 KALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKADAEENLLTC 69
Query: 64 FVGFVSDFDTPSGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQ 123
S SS+KK V+ +P F LK N + +DA
Sbjct: 70 LADLFSQI------SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAH 112
Query: 124 EFLSFIMDQMHDELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPS 183
EFL+++++++ + L K + + N +++ +A + +K + +
Sbjct: 113 EFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANGVHKEPIV-------T 165
Query: 184 ALSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGY 242
+ IF G L + + + +A + FL L LDI E +I L+ FS+ E L
Sbjct: 166 WVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI--EQNSSITSCLKNFSSTETLHAE 223
Query: 243 -RTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGR 299
+ + A+K +KI+ IL++HL RF Y Q KL V FPL+L L
Sbjct: 224 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 283
Query: 300 DLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVL- 358
+ E Y L A V H G P+ GHY + + N WL FDD SV I S V
Sbjct: 284 TVDEYVDIE---YSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDESVEIIEESAVQT 339
Query: 359 -----------HDQAYVLFYKQV 370
D Y+L Y+ +
Sbjct: 340 FFGSSQEYSSNTDHGYILLYESL 362
>sp|Q0WX57|U17LO_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 24 OS=Homo
sapiens GN=USP17L24 PE=1 SV=2
Length = 530
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 144/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>sp|D6RJB6|U17LK_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 20 OS=Homo
sapiens GN=USP17L20 PE=3 SV=1
Length = 530
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 144/355 (40%), Gaps = 64/355 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKDT--TLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYEL 314
A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVL 319
Query: 315 VATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 320 YAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
>sp|Q9FIQ1|UBP21_ARATH Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana
GN=UBP21 PE=2 SV=1
Length = 732
Score = 99.4 bits (246), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 137/352 (38%), Gaps = 51/352 (14%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL NSGN CF+ + LQ P + L+ + G +
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRDHIELALRS 223
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
S NI F L F+ D I+ QEDA EFL +D++
Sbjct: 224 SGYGINID-----------RFRDNLTYFSSDF--MIN---HQEDAHEFLQSFLDKL---- 263
Query: 138 LKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS-V 196
E + PKN+ +Q + + ++FGG L S +
Sbjct: 264 ------------------------ERCCLDPKNQLGSVSSQDL--NIVDNVFGGGLMSTL 297
Query: 197 VKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAK 256
N S T +P L L+I E V+T+ AL F+ E LE T V T +
Sbjct: 298 CCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKE 354
Query: 257 KSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELV 315
K ++ L + HL RF+ K+ + FPL+L L + E +Y L
Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLY 414
Query: 316 ATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY
Sbjct: 415 AFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 161/375 (42%), Gaps = 71/375 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQLLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSGG 77
GL+N GN C+ N+ LQAL C PF + + + + K T A D
Sbjct: 36 GLVNFGNTCYCNSVLQALYFCRPFRENVLAYKAQQKKKENLLTCLA--------DLFHSI 87
Query: 78 SSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDEL 137
+++KK + V+ P F + L+ N + Q+DA EFL+++++ + D +
Sbjct: 88 ATQKKKVGVI------PPKKFISRLRK-----ENDLFDNYMQQDAHEFLNYLLNTIAD-I 135
Query: 138 LKLQGESTSING--ANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L+ + + NG N + AE NK +T + +IF G L +
Sbjct: 136 LQEEKKQEKQNGKLKNGNMNEPAE---------NNKPELT--------WVHEIFQGTLTN 178
Query: 196 VVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL---EGYRTSSTGNAG 251
+ S+ + FL L +D+ E +I LR FS E L + Y + +
Sbjct: 179 ETRCLNCETVSSKDEDFLDLSVDV--EQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQ 236
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQ--GSTKLHKSVRFPLQLVLGRDLLVTPSAEG 309
A+K ++++ L IL LHL RF Y Q TKL V FPL+L L S++
Sbjct: 237 --EAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVVFPLEL-----RLFNTSSDA 289
Query: 310 ----RKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLH------ 359
R Y+LVA V H G P++GHY + + WL FDD V I +
Sbjct: 290 VNLDRMYDLVAVVVHCGSGPNRGHYITIVKS-HGFWLLFDDDIVEKIDAQAIEEFYGLTS 348
Query: 360 ------DQAYVLFYK 368
+ Y+LFY+
Sbjct: 349 DISKNSESGYILFYQ 363
>sp|Q7M764|U17L2_MOUSE Ubiquitin carboxyl-terminal hydrolase 17 OS=Mus musculus GN=Usp17l2
PE=3 SV=2
Length = 540
Score = 99.0 bits (245), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 145/357 (40%), Gaps = 66/357 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSD--FDTP 74
GL N+GN C+LNA LQ L P +L + ++ + A V+ +
Sbjct: 86 GLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKMCAMEAHVTQSLLHSH 145
Query: 75 SGGSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMH 134
SG D+ +P S + A K+ +QEDA EFL F ++ MH
Sbjct: 146 SG-----------DVMKP-SQILTSAFHKH-------------QQEDAHEFLMFTLETMH 180
Query: 135 DELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLK 194
+ L++ +S P++ S + DIFGG +
Sbjct: 181 ESCLQVHRQSDPT--------------------PQDTSPI-----------HDIFGGWWR 209
Query: 195 SVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GV 252
S +K S T PFL + LDI S ++ AL E L G G
Sbjct: 210 SQIKCLHCQGTSHTFDPFLDVPLDISS--AQSVNQALWDTGKSEELLGENAYYCGRCRQK 267
Query: 253 VTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKY 312
+ A K++ + K+L+L L RFS + KL + V +P L L + L P+ Y
Sbjct: 268 MPASKTLHVHIAPKVLLLVLKRFSAFT--GNKLDRKVSYPEFLDL-KPYLSEPTGGPLPY 324
Query: 313 ELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G + GHY + + +W DD VT + VL++ AYVLFY Q
Sbjct: 325 ALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFYVQ 381
>sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus
GN=Usp42 PE=3 SV=1
Length = 1325
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 146/356 (41%), Gaps = 64/356 (17%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN CF NA LQ L P +L ++ G+ + ++ + G
Sbjct: 111 GLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPG 170
Query: 77 GSSKKKNISVLDIGRP-FSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHD 135
D+ +P F + + ++F QEDA EFL + +D M
Sbjct: 171 -----------DVIKPMFVINEMRRIARHFRFG---------NQEDAHEFLQYTVDAMQK 210
Query: 136 ELLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKS 195
L NG+N L + T+ + IFGG L+S
Sbjct: 211 ACL---------NGSN----KLDRHTQATTL------------------VCQIFGGYLRS 239
Query: 196 VVKAQGNKA-SATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEG---YRTSSTGNAG 251
VK K S T P+L + L+I +A ++ AL F PE L+G Y+ S
Sbjct: 240 RVKCLNCKGVSDTFDPYLDITLEI--KAAQSVTKALEQFVKPEQLDGENSYKCSKCKK-- 295
Query: 252 VVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRK 311
+V A K I S +L + L RF+ + G K+ K V++P L + R + P+ E
Sbjct: 296 MVPASKRFTIHRSSNVLTISLKRFANFTGG--KIAKDVKYPEYLDI-RPYMSQPNGEPII 352
Query: 312 YELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 367
Y L A + H G + GHY + N W +D+ V+ VL+ QAYVLFY
Sbjct: 353 YVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY 408
>sp|C9J2P7|U17LF_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 15 OS=Homo
sapiens GN=USP17L15 PE=3 SV=1
Length = 530
Score = 98.2 bits (243), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 144/356 (40%), Gaps = 66/356 (18%)
Query: 18 GLINSGNLCFLNATLQALMSCSPFVQ-LLQELRTRDIPKAGYPTLTAFVGFVSDFDTPSG 76
GL N GN C++NA+LQ L P +L ++ + L ++
Sbjct: 81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITR------ 134
Query: 77 GSSKKKNISVLDIGRPFSPSMFEAVLKNFTPDVPNSISGRPRQEDAQEFLSFIMDQMHDE 136
++ + G PS +A+ F R +QEDA EFL F +D M
Sbjct: 135 --------ALHNPGHVIQPS--QALAAGF---------HRGKQEDAHEFLMFTVDAMKKA 175
Query: 137 LLKLQGESTSINGANTALVSLAEEDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSV 196
L P +K ++ + + IFGG +S
Sbjct: 176 CL-----------------------------PGHKQVDHHSKD--TTLIHQIFGGYWRSQ 204
Query: 197 VKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVT 254
+K + S T P+L + LDI +A +++ AL PE L G G
Sbjct: 205 IKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLVKPEELNGENAYHCGVCLQRAP 262
Query: 255 AKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGR-KYE 313
A K++ + T +K+LIL L RFS K+ K+V++P L L ++ + G Y
Sbjct: 263 ASKTLTLHTSAKVLILVLKRFS--DVTGNKIDKNVQYPE--CLDMKLYMSQTNSGPLVYV 318
Query: 314 LVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 369
L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,061,588
Number of Sequences: 539616
Number of extensions: 5214942
Number of successful extensions: 13903
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 201
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 12968
Number of HSP's gapped (non-prelim): 653
length of query: 370
length of database: 191,569,459
effective HSP length: 119
effective length of query: 251
effective length of database: 127,355,155
effective search space: 31966143905
effective search space used: 31966143905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)